BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 006640
         (637 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|225430029|ref|XP_002281569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Vitis vinifera]
          Length = 635

 Score =  903 bits (2333), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 430/622 (69%), Positives = 516/622 (82%), Gaps = 2/622 (0%)

Query: 16  KYQSGSTIVKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSM 75
           ++Q G+T VKK   + +  +      K +L+  S+  D Q Q  C  C++K SCRTVRS 
Sbjct: 16  EHQDGTTDVKKEEVEALQTEVKRRDGKHELHPVSQSADPQSQVRCISCLSKTSCRTVRSR 75

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           TKLMN +IE+G+PQE Q+I +++IEGGHKPSLVTYTTLLAALTIQK F+SIHSI+SQVEE
Sbjct: 76  TKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEE 135

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           NGM+PDSIFFNAVINAFSESGNM+EAM  FWKMKESG  PTTST+NTLIKGYGIAG+PEE
Sbjct: 136 NGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEE 195

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           S KLL+LMS++ NV+PNLRTYNVLVRAWCN+KNI +AWNV++KM ASG++PD VTYNTIA
Sbjct: 196 SQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIA 255

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           TAYAQNGEA QAE +I+EM+++ VQPN RTC III GYCKEGKIKEAL+F   MK+ G+ 
Sbjct: 256 TAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQ 315

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PNLV+FN LIKGF++ +DRDGV+EVL LM+EF V PDVIT+STIMNAWS AGFMDKC+EI
Sbjct: 316 PNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREI 375

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           FDDM KA I+PDAH YSILAKGYVR  EPEKAEE+L  MI+SGFHPNVVIFTTII+GWCS
Sbjct: 376 FDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCS 435

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G M+ AI++F+KMCE G++PNLKTFETL+WGY EARQPW++EE+LQIM+ F V P+K+T
Sbjct: 436 AGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTT 495

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNL 555
            LL+AEA RATGL KEA RILS +KN+E T+E + E+ IPV SLE+ Y K   +AS+PN 
Sbjct: 496 LLLVAEAWRATGLKKEANRILSAVKNEEMTHETDREDKIPVGSLEKHYQK--PSASFPNQ 553

Query: 556 LQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQK 615
           LQ+PN+V SDQKGS +A K+ RM+L D D SLE SW AT S+ L+HSC  GAR PIICQK
Sbjct: 554 LQLPNLVISDQKGSGSATKRSRMVLGDTDFSLESSWTATRSLSLTHSCTFGARSPIICQK 613

Query: 616 QPLGQVGMYSQLANSCTVVFLN 637
           Q  GQ+ MYSQLA+SC +VFLN
Sbjct: 614 QSHGQLCMYSQLAHSCPLVFLN 635


>gi|147812173|emb|CAN61517.1| hypothetical protein VITISV_033966 [Vitis vinifera]
          Length = 635

 Score =  895 bits (2313), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/622 (68%), Positives = 513/622 (82%), Gaps = 2/622 (0%)

Query: 16  KYQSGSTIVKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSM 75
           ++Q G+T  KK   + +  +      K +L+  S+  D Q Q  C  C++K SCRTVRS 
Sbjct: 16  EHQDGTTDAKKEEVEALQTEVKRRDGKHELHPVSQSADPQSQVRCISCLSKTSCRTVRSR 75

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           TKLMN +IE+G+PQE Q+I +++IEGGHKPSLVTYTTLLAALTIQK F+SIHSI+SQVEE
Sbjct: 76  TKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEE 135

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           NGM+PDSIFFNAVINAFSESGNM+EAM  FWKMKESG  PTTST+NTLIKGYGIAG+PEE
Sbjct: 136 NGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEE 195

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           S KLL+LMS++ NV+PNLRTYNVLVRAWCN+ NI +AWNV++KM ASG++PD VTYNTIA
Sbjct: 196 SQKLLZLMSQDENVRPNLRTYNVLVRAWCNKXNIMKAWNVVYKMVASGLQPDAVTYNTIA 255

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           TAYAQNGEA QAE +I+EM+++ VQPN RTC III GYCKEGKIKEAL+F   MK+ G+ 
Sbjct: 256 TAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQ 315

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PNLV+FN LIKGF++ +DRDGV+EVL LM+EF V PDVIT+STIMNAWS AGFMDKC+EI
Sbjct: 316 PNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREI 375

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           FDDM KA I+PDAH YSILAKGYVR  EPEKAEE+L  MI+SGFHPNVV+FTTII+GWCS
Sbjct: 376 FDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVMFTTIINGWCS 435

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G M+ AI++F+KMCE G++PNLKTFETL+WGY EARQPW++EE+LQIM+ F V P+K+T
Sbjct: 436 AGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTT 495

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNL 555
            LL+AEA RATGL KEA RILS +KN+E T+E + E+ IPV S E+ Y K   +AS+PN 
Sbjct: 496 LLLVAEAWRATGLKKEANRILSAVKNEETTHETDREDKIPVGSSEKHYQK--PSASFPNQ 553

Query: 556 LQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQK 615
           LQ+PN+V SDQKGS +A K+ RM+L D D SLE SW AT S+ L+HSC  GAR PIICQK
Sbjct: 554 LQLPNLVISDQKGSGSATKRSRMVLGDTDFSLESSWTATRSLSLTHSCTFGARSPIICQK 613

Query: 616 QPLGQVGMYSQLANSCTVVFLN 637
           Q  GQ+ MYSQLA+SC +VFLN
Sbjct: 614 QSHGQLCMYSQLAHSCPLVFLN 635


>gi|224143015|ref|XP_002324819.1| predicted protein [Populus trichocarpa]
 gi|222866253|gb|EEF03384.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  890 bits (2301), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 426/579 (73%), Positives = 483/579 (83%), Gaps = 28/579 (4%)

Query: 60  CSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           C FC  K+SCRTVRS TKLMN L+E+GKPQEA++IF +LIEGGHKPSL++YTTLLAALT+
Sbjct: 1   CKFCTTKDSCRTVRSRTKLMNFLVEKGKPQEAESIFYSLIEGGHKPSLISYTTLLAALTM 60

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
           QKRF+SI+SI+SQVEENGM+PDSIFFNAVINAFSESGNME AM+TFWKM+E+G+ PTTST
Sbjct: 61  QKRFDSIYSIISQVEENGMNPDSIFFNAVINAFSESGNMESAMETFWKMQENGMKPTTST 120

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           YNTLIKGYGIAGKPEESVKLL+LMS+EGNVKPNLRTYNVLVRAWCN+K ITEAWNV++KM
Sbjct: 121 YNTLIKGYGIAGKPEESVKLLELMSQEGNVKPNLRTYNVLVRAWCNKKRITEAWNVVYKM 180

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
            ASG++PDVVTYNTIATAYAQ G  DQAE VI+EM++NGVQPN RTCGII+SGYCKEG+I
Sbjct: 181 IASGIQPDVVTYNTIATAYAQKGALDQAEGVILEMQNNGVQPNERTCGIIMSGYCKEGRI 240

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
           +EALRFA  MKE G+HPNLVIFN LIKGFV IMDRDGVDEVL LM+EF V PDVIT+STI
Sbjct: 241 REALRFAYRMKELGIHPNLVIFNSLIKGFVAIMDRDGVDEVLNLMEEFGVKPDVITFSTI 300

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           MNAWSTAGFM+KC+EIFDDM KAGI+PDAHAYSILAKGYVR QEPEKAEELL TMI+SGF
Sbjct: 301 MNAWSTAGFMEKCREIFDDMVKAGIEPDAHAYSILAKGYVRAQEPEKAEELLTTMIKSGF 360

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            PNVVIFTT+ISGWCS G MD A+ VFDKMC+ G+SPNLKTFETL+WG++EARQPW+AEE
Sbjct: 361 QPNVVIFTTVISGWCSAGKMDYAVRVFDKMCQRGISPNLKTFETLIWGFAEARQPWKAEE 420

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEA-EEDIPVES 538
           ILQIM  F V P+KST LL+AEA RATG+TKEA R+L     KE TN  EA E++IPV +
Sbjct: 421 ILQIMTEFEVQPEKSTMLLVAEAWRATGMTKEANRLLGTRNRKEMTNRKEALEKEIPVGN 480

Query: 539 LERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMY 598
           LE+LY K+     Y N+LQIP+                            CSW AT SM 
Sbjct: 481 LEKLYQKQTEGVLYSNILQIPST---------------------------CSWLATGSMS 513

Query: 599 LSHSCKSGARLPIICQKQPLGQVGMYSQLANSCTVVFLN 637
           LSHSCK G RLPIIC+KQ   Q GMY QLA SCT VFLN
Sbjct: 514 LSHSCKFGLRLPIICRKQSQAQHGMYGQLAQSCTAVFLN 552


>gi|296081889|emb|CBI20894.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score =  856 bits (2212), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 413/622 (66%), Positives = 496/622 (79%), Gaps = 29/622 (4%)

Query: 16  KYQSGSTIVKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSM 75
           ++Q G+T VKK   + +  +      K +L+  S+  D Q Q  C  C++K SCRTVRS 
Sbjct: 16  EHQDGTTDVKKEEVEALQTEVKRRDGKHELHPVSQSADPQSQVRCISCLSKTSCRTVRSR 75

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           TKLMN +IE+G+PQE Q+I +++IEGGHKPSLVTYTTLLAALTIQK F+SIHSI+SQVEE
Sbjct: 76  TKLMNIMIEKGRPQEVQSILDSIIEGGHKPSLVTYTTLLAALTIQKHFDSIHSIISQVEE 135

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           NGM+PDSIFFNAVINAFSESGNM+EAM  FWKMKESG  PTTST+NTLIKGYGIAG+PEE
Sbjct: 136 NGMEPDSIFFNAVINAFSESGNMQEAMKYFWKMKESGSKPTTSTFNTLIKGYGIAGEPEE 195

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           S KLL+LMS++ NV+PNLRTYNVLVRAWCN+KNI +AWNV++KM ASG++PD VTYNTIA
Sbjct: 196 SQKLLELMSQDENVRPNLRTYNVLVRAWCNKKNIMKAWNVVYKMVASGLQPDAVTYNTIA 255

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           TAYAQNGEA QAE +I+EM+++ VQPN RTC III GYCKEGKIKEAL+F   MK+ G+ 
Sbjct: 256 TAYAQNGEASQAEGIILEMQNSNVQPNERTCCIIIGGYCKEGKIKEALQFVYRMKDLGLQ 315

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PNLV+FN LIKGF++ +DRDGV+EVL LM+EF V PDVIT+STIMNAWS AGFMDKC+EI
Sbjct: 316 PNLVVFNSLIKGFIDAVDRDGVNEVLTLMEEFGVKPDVITFSTIMNAWSAAGFMDKCREI 375

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           FDDM KA I+PDAH YSILAKGYVR  EPEKAEE+L  MI+SGFHPNVVIFTTII+GWCS
Sbjct: 376 FDDMVKARIQPDAHVYSILAKGYVRAGEPEKAEEILNAMIKSGFHPNVVIFTTIINGWCS 435

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G M+ AI++F+KMCE G++PNLKTFETL+WGY EARQPW++EE+LQIM+ F V P+K+T
Sbjct: 436 AGRMEYAIKIFEKMCECGIAPNLKTFETLIWGYGEARQPWKSEEVLQIMEEFNVQPEKTT 495

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNL 555
            LL+AEA RATGL KEA RILS +KN+E T+E + E+ IPV SLE+ Y K   +AS+PN 
Sbjct: 496 LLLVAEAWRATGLKKEANRILSAVKNEEMTHETDREDKIPVGSLEKHYQK--PSASFPNQ 553

Query: 556 LQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQK 615
           LQ+PN+                            SW AT S+ L+HSC  GAR PIICQK
Sbjct: 554 LQLPNL---------------------------SSWTATRSLSLTHSCTFGARSPIICQK 586

Query: 616 QPLGQVGMYSQLANSCTVVFLN 637
           Q  GQ+ MYSQLA+SC +VFLN
Sbjct: 587 QSHGQLCMYSQLAHSCPLVFLN 608


>gi|225445222|ref|XP_002280919.1| PREDICTED: pentatricopeptide repeat-containing protein At5g21222
           [Vitis vinifera]
 gi|297738818|emb|CBI28063.3| unnamed protein product [Vitis vinifera]
          Length = 636

 Score =  783 bits (2023), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 385/636 (60%), Positives = 475/636 (74%), Gaps = 1/636 (0%)

Query: 1   MGKFAEGKAFLQTDDKYQSGSTIVKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHC 60
           MG F + K       K++ G+   KK   Q     ++   EK QL S S   DSQ Q+ C
Sbjct: 1   MGGFGKEKVHPVIMSKHRDGTNTSKKRV-QASSVMESPLHEKDQLQSVSTSMDSQIQSRC 59

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
             C+   SCRTVRS TKLMN LIE+GKPQEAQ IFN+L E GH+P+L+TYTTLLAALT Q
Sbjct: 60  LVCLGNNSCRTVRSRTKLMNILIEKGKPQEAQLIFNSLTEEGHRPTLITYTTLLAALTRQ 119

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
           KRF SI S++S++E+NG+ PDS+FFNA+INAFSESGN++EAM  F KMK+ G  PTTST+
Sbjct: 120 KRFKSIPSLISKLEKNGLKPDSVFFNAMINAFSESGNVKEAMKIFRKMKDRGCKPTTSTF 179

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           NTLIKGYG AG PEE +KLLDLMS+E NVKPN RT+N L+RAWCN+K ITEAWNV++KMA
Sbjct: 180 NTLIKGYGNAGMPEECLKLLDLMSQEENVKPNDRTFNSLIRAWCNKKRITEAWNVVYKMA 239

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
           ASG++PDVVTYNT+A AYAQNGE  +AE +I+EM++N V PN RTCGIII+GYCKEGK+K
Sbjct: 240 ASGLQPDVVTYNTLARAYAQNGETSRAEGMILEMQNNRVMPNERTCGIIINGYCKEGKMK 299

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           +ALRF   M+ YGVHPNLVIFN LIKGF++I D DGVDE L LM+EF V PDV+T+STIM
Sbjct: 300 DALRFLYRMRNYGVHPNLVIFNSLIKGFLDITDTDGVDEALTLMEEFGVKPDVVTFSTIM 359

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           NAWS+ G MDKC+EIFDDM KAGI+PD HA+SILAKGYVR  EPEKAE LL  M +SG  
Sbjct: 360 NAWSSVGLMDKCQEIFDDMVKAGIEPDIHAFSILAKGYVRAGEPEKAESLLTAMGKSGVQ 419

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PNVVIFTTIISGWCS G M+ A  V++KMCE G+ PNLKTFETL+WGY EA++P +AEE+
Sbjct: 420 PNVVIFTTIISGWCSAGKMEYASRVYEKMCEMGICPNLKTFETLIWGYGEAKEPQKAEEL 479

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLE 540
           LQIM+  GV P KST  L+A+A  A GL  EAKRI + ++   +      E+D+  ESLE
Sbjct: 480 LQIMEQKGVAPVKSTIQLVADAWHALGLANEAKRIKNDVEEAPKVMISTKEDDVAAESLE 539

Query: 541 RLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYLS 600
           R+Y K+   ASY +++Q+P +V +DQ GS AA  + RM+++   S  E  W AT SM+L+
Sbjct: 540 RIYQKQNLKASYSDIVQVPGIVMTDQNGSTAANIRSRMIMKGPGSPPENLWTATKSMFLA 599

Query: 601 HSCKSGARLPIICQKQPLGQVGMYSQLANSCTVVFL 636
            +     R   IC+ Q  GQVG+  Q  NSC +VFL
Sbjct: 600 QASGFRVRPSFICRTQFQGQVGVCGQCVNSCRLVFL 635


>gi|356554513|ref|XP_003545590.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Glycine max]
          Length = 632

 Score =  768 bits (1984), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 384/637 (60%), Positives = 471/637 (73%), Gaps = 5/637 (0%)

Query: 1   MGKFAEGKAFLQTDDKYQSGSTIVKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHC 60
           MGK         T  + QSG+  +KKG       K N+   K  +   +K T+S  Q  C
Sbjct: 1   MGKPGNDDTDCGTRSRKQSGNNNMKKGLFHSEFDKGNHFDGKNHMNEITKATNSGSQPSC 60

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           +FCM K  C+ VRS TK+MN LI+ GKPQEA  IF NLIEGGH+PSL TYTTLL ALT Q
Sbjct: 61  TFCMGKNDCQIVRSRTKVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQ 120

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
           K F  IHSI+S VEE  M PDSIFFNA+INAF+ESGNME+A     KMKESGL P+  TY
Sbjct: 121 KYFKPIHSIVSLVEEKQMKPDSIFFNALINAFAESGNMEDAKKVVQKMKESGLKPSACTY 180

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           NTLIKGYGIAGKP+ES+KLLDLMS EGNVKPNL+TYN+L+RA C  +NI+EAWNV++KM 
Sbjct: 181 NTLIKGYGIAGKPDESMKLLDLMSTEGNVKPNLKTYNMLIRALCKMENISEAWNVVYKMT 240

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
           ASGM+PDVVT+NTIATAYAQNG+  QAE +I+EM+ N ++PN RTC IIISGYC+EGK++
Sbjct: 241 ASGMQPDVVTFNTIATAYAQNGKTAQAEAMILEMQRNSLKPNERTCTIIISGYCREGKVQ 300

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           EALRF   MK+ G+ PNL++ N L+ GFV++MDRDGVDEVL LM+EF++ PDVITYSTIM
Sbjct: 301 EALRFVYRMKDLGMQPNLIVLNSLVNGFVDMMDRDGVDEVLKLMEEFQIRPDVITYSTIM 360

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           NAWS AGF++KCKEI+++M K+G+KPDAHAYSILAKGYVR QE EKAEE+L  M +SG H
Sbjct: 361 NAWSQAGFLEKCKEIYNNMLKSGVKPDAHAYSILAKGYVRAQEMEKAEEMLTVMTKSGVH 420

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PNVVIFTT+ISGWCS G MD A+ VFDKM E GVSPNLKTFETL+WGY+EA+QPW+AE +
Sbjct: 421 PNVVIFTTVISGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGM 480

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLE 540
           LQIM+ F V P+KST LL+AEA R  G  + AK +L  +K K   N +  +++ P +  E
Sbjct: 481 LQIMEEFHVQPKKSTILLVAEAWRFAGFKERAKTLLRTVKAK-MANSIGKDDNKPAKMSE 539

Query: 541 RLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYLS 600
           ++Y K  T A + +LLQIP++ S+DQKGSA   ++ R LLRD   ++E     T      
Sbjct: 540 KIYQKPHTNAPFCSLLQIPSISSTDQKGSALTSRRNRRLLRDG--AVETLLLTTKFKCHP 597

Query: 601 HSCKSGARLPIICQKQPLGQVGMYSQLANSCTVVFLN 637
             C+ G    I+  KQ  GQ G Y Q ANSCT VFLN
Sbjct: 598 QICRYGEGFSIM-GKQFQGQHGTY-QFANSCTAVFLN 632


>gi|297808589|ref|XP_002872178.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318015|gb|EFH48437.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  706 bits (1822), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/603 (58%), Positives = 435/603 (72%), Gaps = 46/603 (7%)

Query: 41  EKKQLYSNSKPTDSQPQTH--CSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNL 98
           EKK++   S+P  S P  +  C  C    SCRTVRS TKLMN LIERG+P EAQ +F  L
Sbjct: 6   EKKKVLPMSEPEKSTPIKYRFCKSCGEGSSCRTVRSRTKLMNVLIERGRPHEAQTVFKTL 65

Query: 99  IEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNM 158
            E GH+PSL++YTTLLAA+T+QK++ S+ SI+S+VE++G  PDSIFFNAVINAFSESGNM
Sbjct: 66  AETGHRPSLISYTTLLAAMTVQKQYGSLSSIVSEVEQSGTKPDSIFFNAVINAFSESGNM 125

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN--VKPNLRTY 216
           E+A+    KMKE GL PTTSTYNTLIKGYGIAGKPE S  LLDLM  E N  V+PN+RT+
Sbjct: 126 EDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSALLDLMLEESNVDVRPNIRTF 185

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE--M 274
           NVLV+AWC +K + EAW V+HKM   G++PD VTYNTIAT Y Q GE  +AE  +VE  +
Sbjct: 186 NVLVQAWCKKKKVEEAWEVVHKMEECGVRPDTVTYNTIATCYVQKGETVRAESEVVEKMV 245

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
                +PNGRTCGI++ GYC+EG++++ LRF R MKE  V  NLV+FN LI GFVE+MDR
Sbjct: 246 MKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFVEVMDR 305

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           DG+DEVL LMKE  V  DVITYST+MNAWS+AG+M+K  ++F +M KAG+KPDAHAYSIL
Sbjct: 306 DGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAHAYSIL 365

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
           AKGYVR +EP+KAEELL T+I     PNVVIFTT+ISGWCS GSMD A+ VF+KMC+ GV
Sbjct: 366 AKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSSGSMDDAMRVFNKMCKFGV 424

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
           SPN+KTFETLMWGY E +QPW+AEE+LQ+M+ FGV P+ STFLLLAEA R  GLT E+ +
Sbjct: 425 SPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGFGVKPENSTFLLLAEAWRVAGLTDESNK 484

Query: 515 ILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALK 574
            ++ +K K          DI +  LE+LY K+++ +S  NLLQIP  V   +  +A A  
Sbjct: 485 AINALKCK----------DIEIAKLEKLYQKQSSGSSL-NLLQIP--VGKRELPTAKA-- 529

Query: 575 KGRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPLGQVGMYSQLANSCTVV 634
                                 M LS +CK GAR+PIICQKQ   Q G+  Q  +SCT V
Sbjct: 530 ----------------------MNLS-ACKLGARVPIICQKQSQAQFGISGQFVHSCT-V 565

Query: 635 FLN 637
           FLN
Sbjct: 566 FLN 568


>gi|255546465|ref|XP_002514292.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546748|gb|EEF48246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 608

 Score =  704 bits (1816), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 353/601 (58%), Positives = 443/601 (73%), Gaps = 23/601 (3%)

Query: 41  EKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIE 100
           EK Q    S   DS+ Q+ C  C+ K SCRTV S TKLMN LI +GKP EA  IF+NL+E
Sbjct: 27  EKDQFQLISPSVDSRVQSRCPVCLGKNSCRTVHSRTKLMNILIGKGKPHEANLIFDNLVE 86

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
            GH+P+L+TYTTL+AALT  K F SI  ++S+VEENGM PDSI +NA+INAFSESGN++E
Sbjct: 87  DGHRPTLITYTTLVAALTKLKHFESIFLLISKVEENGMKPDSILYNAMINAFSESGNVKE 146

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           AM  F KMK++G  PTTST+NTLIKGYG AGKPEE +K+L LMS +G+VKPN RTYN+LV
Sbjct: 147 AMKIFQKMKDTGCKPTTSTFNTLIKGYGNAGKPEEGLKMLHLMSLDGSVKPNDRTYNILV 206

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           RAWC++KNI EAWNV+HKM ASG++PDVVTYN +A AYAQ GE  +AE++I+EM++  V 
Sbjct: 207 RAWCSKKNIEEAWNVLHKMVASGIQPDVVTYNILARAYAQKGETLRAEDLILEMQYEKVA 266

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           PN RTCGII++GYCKEG + EALRF   MKE GVHPNLVIFN LIKGF++I D DGVDE 
Sbjct: 267 PNERTCGIIVNGYCKEGNMIEALRFVYRMKELGVHPNLVIFNSLIKGFLDITDTDGVDEA 326

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L LM+E+ V PDVIT+STIMNAWS+AG MDKC+EIF+DM KAGI+PD HA+SILAKGYVR
Sbjct: 327 LTLMEEYGVKPDVITFSTIMNAWSSAGLMDKCQEIFNDMAKAGIEPDIHAFSILAKGYVR 386

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
             E E AE +L +M +SG  PNVVI TTIISGWCS G M+ A  V++KMCE G+SPNLKT
Sbjct: 387 AGETENAESVLTSMAKSGVRPNVVICTTIISGWCSAGKMENAKMVYEKMCEIGISPNLKT 446

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           FETL+WGY+EARQP +AEE+LQ+M+  GV P+KST  L+A+A R  GL  EAKRI    K
Sbjct: 447 FETLIWGYAEARQPGKAEELLQLMEEKGVFPEKSTIQLVADAWRNIGLLCEAKRI---TK 503

Query: 521 NKERTNEMEAE---EDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALK-KG 576
            +E   E+ A+    +IPVESLER+Y  +  +ASY   LQI   V + Q GS +A+  + 
Sbjct: 504 IEEEDEELYADCKRGEIPVESLERIYRDQNGSASYLKTLQISGEVMTKQNGSTSAVNIRS 563

Query: 577 RMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPLGQVGMYSQLANSCTVVFL 636
           +++LR   S                SC++  +  IIC++     V M  +L NSC ++ +
Sbjct: 564 QLVLRRYRS----------------SCQNRKQPLIICRQHCRHCVRMCGKLINSCGMIAI 607

Query: 637 N 637
           +
Sbjct: 608 S 608


>gi|30689969|ref|NP_197945.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|357528836|sp|Q8GZ63.2|PP397_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g25630
 gi|332006092|gb|AED93475.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 574

 Score =  696 bits (1795), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/608 (57%), Positives = 435/608 (71%), Gaps = 51/608 (8%)

Query: 41  EKKQLYSNSKPTDSQP-------QTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQA 93
           EKK++   S+P  S P          C  C+   SCRTVRS TKLMN LIERG+P EAQ 
Sbjct: 7   EKKKVPPMSEPERSTPIKTTGGQYRFCKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQT 66

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +F  L E GH+PSL++YTTLLAA+T+QK++ SI SI+S+VE++G   DSIFFNAVINAFS
Sbjct: 67  VFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFS 126

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK--P 211
           ESGNME+A+    KMKE GL PTTSTYNTLIKGYGIAGKPE S +LLDLM  EGNV   P
Sbjct: 127 ESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGP 186

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           N+RT+NVLV+AWC +K + EAW V+ KM   G++PD VTYNTIAT Y Q GE  +AE  +
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246

Query: 272 VE--MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           VE  +     +PNGRTCGI++ GYC+EG++++ LRF R MKE  V  NLV+FN LI GFV
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           E+MDRDG+DEVL LMKE  V  DVITYST+MNAWS+AG+M+K  ++F +M KAG+KPDAH
Sbjct: 307 EVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 366

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           AYSILAKGYVR +EP+KAEELL T+I     PNVVIFTT+ISGWCS+GSMD A+ VF+KM
Sbjct: 367 AYSILAKGYVRAKEPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKM 425

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
           C+ GVSPN+KTFETLMWGY E +QPW+AEE+LQ+M+  GV P+ STFLLLAEA R  GLT
Sbjct: 426 CKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLT 485

Query: 510 KEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGS 569
            E+ + ++ +K K          DI +  LE+LY K+++ +S+ NLLQIP  V   +  +
Sbjct: 486 DESNKAINALKCK----------DIEIAKLEKLYQKQSSGSSF-NLLQIP--VGKRELPT 532

Query: 570 AAALKKGRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPLGQVGMYSQLAN 629
           A A                        M LS +CK GAR+PIICQKQ   Q G+  Q  +
Sbjct: 533 AKA------------------------MNLS-ACKLGARVPIICQKQSQAQFGISGQFVH 567

Query: 630 SCTVVFLN 637
           SCT VFL+
Sbjct: 568 SCT-VFLS 574


>gi|26449475|dbj|BAC41864.1| unknown protein [Arabidopsis thaliana]
 gi|29028966|gb|AAO64862.1| At5g25630 [Arabidopsis thaliana]
          Length = 574

 Score =  692 bits (1787), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 350/608 (57%), Positives = 434/608 (71%), Gaps = 51/608 (8%)

Query: 41  EKKQLYSNSKPTDSQP-------QTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQA 93
           EKK++   S+P  S P          C  C+   SCRTVRS TKLMN LIERG+P EAQ 
Sbjct: 7   EKKKVPPMSEPERSTPIKTTGGQYRFCKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQT 66

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +F  L E GH+PSL++YTTLLAA+T+QK++ SI SI+S+VE++G   DSIFFNAVINAFS
Sbjct: 67  VFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFS 126

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK--P 211
           ESGNME+A+    KMKE GL PTTSTYNTLIKGYGIAGKPE S +LLDLM  EGNV   P
Sbjct: 127 ESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGP 186

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           N+RT+NVLV+AWC +K + EAW V+ KM   G++PD VTYNTIAT Y Q GE  +AE  +
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246

Query: 272 VE--MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           VE  +     +PNGRTCGI++ GYC+EG++++ LRF R MKE  V  NLV+FN LI GFV
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           E+MDRDG+DEVL LMKE  V  DVITYST+MNAWS+AG+M+K  ++F +M KAG+KPDAH
Sbjct: 307 EVMDRDGIDEVLTLMKECNVKADVITYSTVMNAWSSAGYMEKAAQVFKEMVKAGVKPDAH 366

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           AYSILAKGYVR + P+KAEELL T+I     PNVVIFTT+ISGWCS+GSMD A+ VF+KM
Sbjct: 367 AYSILAKGYVRAKGPKKAEELLETLIVES-RPNVVIFTTVISGWCSNGSMDDAMRVFNKM 425

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
           C+ GVSPN+KTFETLMWGY E +QPW+AEE+LQ+M+  GV P+ STFLLLAEA R  GLT
Sbjct: 426 CKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMMRGCGVKPENSTFLLLAEAWRVAGLT 485

Query: 510 KEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGS 569
            E+ + ++ +K K          DI +  LE+LY K+++ +S+ NLLQIP  V   +  +
Sbjct: 486 DESNKAINALKCK----------DIEIAKLEKLYQKQSSGSSF-NLLQIP--VGKRELPT 532

Query: 570 AAALKKGRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPLGQVGMYSQLAN 629
           A A                        M LS +CK GAR+PIICQKQ   Q G+  Q  +
Sbjct: 533 AKA------------------------MNLS-ACKLGARVPIICQKQSQAQFGISGQFVH 567

Query: 630 SCTVVFLN 637
           SCT VFL+
Sbjct: 568 SCT-VFLS 574


>gi|356513139|ref|XP_003525271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 621

 Score =  686 bits (1771), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 341/602 (56%), Positives = 439/602 (72%), Gaps = 17/602 (2%)

Query: 42  KKQLYSNSKPT-DSQPQ-----THCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIF 95
           K+Q Y  +KP   S PQ     +HC  C    SC+TV + TKLMN+LI +GKP EAQA+F
Sbjct: 24  KQQQYKKNKPKLSSTPQERCDQSHCLICRGNNSCQTVHARTKLMNALIGKGKPHEAQAVF 83

Query: 96  NNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSES 155
           +NL E GHKP+L+TYTTL+AALT QKRF SI +++S+V +NGM PDSI  NA+INAFS+S
Sbjct: 84  HNLTEEGHKPTLITYTTLVAALTRQKRFKSIPALLSKVADNGMKPDSILLNAMINAFSDS 143

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
           G ++EAM  F KMKE G  PTTSTYNTLIKG+GI G+P ES+KLL++M ++ NVKPN RT
Sbjct: 144 GKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGFGIVGRPYESMKLLEMMGQDENVKPNDRT 203

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           YN+L++AWC +K + EAWNV+HKM ASG++PDVVTYNT+A AYAQNGE ++AE +I++M+
Sbjct: 204 YNILIQAWCTKKKLEEAWNVLHKMVASGIQPDVVTYNTMARAYAQNGETEKAERLILKMQ 263

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
           +N V+PN RTCGIIISGYCKEG + EALRF   MKE GVHPN V+FN LIKG+++  D +
Sbjct: 264 YNKVKPNERTCGIIISGYCKEGNMTEALRFLYRMKELGVHPNPVVFNSLIKGYLDATDTN 323

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
           GVDE L LM+EF + PDV+T+STIMNAWS+AG MD C+EIF+DM KAGI+PD HAYSILA
Sbjct: 324 GVDEALTLMEEFGIKPDVVTFSTIMNAWSSAGLMDNCEEIFNDMVKAGIEPDIHAYSILA 383

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
           KGYVR  +P KAE LL +M + G   NVVIFTTIISGWC+ G MDRA  + +KM E G S
Sbjct: 384 KGYVRAGQPRKAESLLTSMSKYGVQTNVVIFTTIISGWCAAGKMDRAFSLCEKMHEMGTS 443

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           PNLKT+ETL+WGY EA+QPW+AEEIL  M+  GV P+ ST  L+A+A RA GL KEA RI
Sbjct: 444 PNLKTYETLIWGYGEAKQPWKAEEILSTMEERGVVPEMSTMQLVADAWRAIGLFKEANRI 503

Query: 516 LSKIKNKERTNEMEAEED---IPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAA 572
           L+     E  +E++ E D   +PV+SLE +Y K+  +AS  NLLQI +VV +  + +   
Sbjct: 504 LN---GSEEESELDQEFDSDKMPVQSLESIYKKQKLSASPSNLLQIRDVVVAHPERTTNG 560

Query: 573 LKKGRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPLGQVGMYSQLANSCT 632
             + RM+++ +D+        TTSM+   +  S    P+I   Q + Q  +     + C 
Sbjct: 561 NIRSRMVVKLSDNMRN----VTTSMFFVRTRSSYGVQPLIVSSQQI-QNQVVRPFLDCCR 615

Query: 633 VV 634
           VV
Sbjct: 616 VV 617


>gi|334187948|ref|NP_001190400.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332006093|gb|AED93476.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 599

 Score =  682 bits (1761), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/633 (55%), Positives = 435/633 (68%), Gaps = 76/633 (12%)

Query: 41  EKKQLYSNSKPTDSQP-------QTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQA 93
           EKK++   S+P  S P          C  C+   SCRTVRS TKLMN LIERG+P EAQ 
Sbjct: 7   EKKKVPPMSEPERSTPIKTTGGQYRFCKSCVEGSSCRTVRSRTKLMNVLIERGRPHEAQT 66

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +F  L E GH+PSL++YTTLLAA+T+QK++ SI SI+S+VE++G   DSIFFNAVINAFS
Sbjct: 67  VFKTLAETGHRPSLISYTTLLAAMTVQKQYGSISSIVSEVEQSGTKLDSIFFNAVINAFS 126

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK--P 211
           ESGNME+A+    KMKE GL PTTSTYNTLIKGYGIAGKPE S +LLDLM  EGNV   P
Sbjct: 127 ESGNMEDAVQALLKMKELGLNPTTSTYNTLIKGYGIAGKPERSSELLDLMLEEGNVDVGP 186

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           N+RT+NVLV+AWC +K + EAW V+ KM   G++PD VTYNTIAT Y Q GE  +AE  +
Sbjct: 187 NIRTFNVLVQAWCKKKKVEEAWEVVKKMEECGVRPDTVTYNTIATCYVQKGETVRAESEV 246

Query: 272 VE--MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           VE  +     +PNGRTCGI++ GYC+EG++++ LRF R MKE  V  NLV+FN LI GFV
Sbjct: 247 VEKMVMKEKAKPNGRTCGIVVGGYCREGRVRDGLRFVRRMKEMRVEANLVVFNSLINGFV 306

Query: 330 EIMDRDGVDE-------------------------VLALMKEFRVNPDVITYSTIMNAWS 364
           E+MDRDG+DE                         VL LMKE  V  DVITYST+MNAWS
Sbjct: 307 EVMDRDGIDEVTLTLLLMSFNEEVELVGNQKMKVQVLTLMKECNVKADVITYSTVMNAWS 366

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
           +AG+M+K  ++F +M KAG+KPDAHAYSILAKGYVR +EP+KAEELL T+I     PNVV
Sbjct: 367 SAGYMEKAAQVFKEMVKAGVKPDAHAYSILAKGYVRAKEPKKAEELLETLIVES-RPNVV 425

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           IFTT+ISGWCS+GSMD A+ VF+KMC+ GVSPN+KTFETLMWGY E +QPW+AEE+LQ+M
Sbjct: 426 IFTTVISGWCSNGSMDDAMRVFNKMCKFGVSPNIKTFETLMWGYLEVKQPWKAEEVLQMM 485

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYH 544
           +  GV P+ STFLLLAEA R  GLT E+ + ++ +K K          DI +  LE+LY 
Sbjct: 486 RGCGVKPENSTFLLLAEAWRVAGLTDESNKAINALKCK----------DIEIAKLEKLYQ 535

Query: 545 KEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYLSHSCK 604
           K+++ +S+ NLLQIP  V   +  +A A                        M LS +CK
Sbjct: 536 KQSSGSSF-NLLQIP--VGKRELPTAKA------------------------MNLS-ACK 567

Query: 605 SGARLPIICQKQPLGQVGMYSQLANSCTVVFLN 637
            GAR+PIICQKQ   Q G+  Q  +SCT VFL+
Sbjct: 568 LGARVPIICQKQSQAQFGISGQFVHSCT-VFLS 599


>gi|357436523|ref|XP_003588537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477585|gb|AES58788.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 653

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 346/646 (53%), Positives = 454/646 (70%), Gaps = 26/646 (4%)

Query: 13  TDDKYQSGSTIVKKGWG--QMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCR 70
           T  + QSG+  +++G G  Q++  K ++   K Q+   +K   S  +  C+FC+ K++C 
Sbjct: 13  TSRRNQSGNANMERGKGSFQLVTGKGSHSYSKNQMNRIAKDEYSGSKLTCTFCICKKTCG 72

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            V S TKL+N LI  GKPQ A  IF  LIE GH+PSL+TYT+LL ALT+QK F SIHS++
Sbjct: 73  VVCSRTKLLNILIVCGKPQAANVIFKKLIEEGHQPSLITYTSLLHALTMQKCFKSIHSLV 132

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           SQVEE  M  +SIF+NAVINAF+ESGNME+A  T  KMKESG  P+T TY+ LIKGYGI 
Sbjct: 133 SQVEEKQMKTNSIFYNAVINAFAESGNMEDAKKTVQKMKESGFRPSTGTYSNLIKGYGIV 192

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK  E++KLLDLM  +GN KP+L+TYN+L++A C   N++EAWN++ KM ASGM PD VT
Sbjct: 193 GKSGEAMKLLDLMLTDGNSKPDLQTYNMLIKALCQSGNMSEAWNIVCKMPASGMLPDSVT 252

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +NT+A  Y  N E  +AE +I+EM+  G++PN RT  +I++GY KEG+IKEAL+F   +K
Sbjct: 253 FNTMAIGYVLNSETAEAEAMILEMQRKGLEPNERTFTVIVNGYYKEGQIKEALQFVYRIK 312

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDE-----------------VLALMKEFRVNPDV 353
           + G  PNL++FN+LI GFV+ MDRDGVDE                 VL LMKEF++ PDV
Sbjct: 313 DLGFKPNLLVFNVLINGFVDRMDRDGVDEFSNTFAQEGKNQVTTPLVLRLMKEFQIQPDV 372

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           +TYSTIMNAWS AGF DKCK+IFD+M ++G+KPD HAYSIL KGYVR  E EKAEELL  
Sbjct: 373 VTYSTIMNAWSQAGFQDKCKQIFDNMLQSGVKPDVHAYSILVKGYVRSMETEKAEELLGD 432

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           MIESG  PNVV FT +ISGW S G MD AI++FDKMCE GVSPNL+TFE L+WGY++A Q
Sbjct: 433 MIESGVRPNVVTFTNVISGWGSSGRMDNAIKIFDKMCELGVSPNLRTFEALIWGYAKADQ 492

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEED 533
           PW++EEILQ+M+ F VHP+KSTFLL+++A R  GLT+EA R+ S  + K+R N ++ + +
Sbjct: 493 PWKSEEILQLMEEFHVHPKKSTFLLVSKAWRFAGLTEEAIRLRSISRAKQRINSIDEDGN 552

Query: 534 IPVESLERLYHKEATTASYPNLLQ-IPNVV-SSDQKGSAAALKKGRMLLRDADSSLECSW 591
           +   S ER+Y K    A   +LLQ +P+ V S+D+KG+A   ++   L RDAD  L  + 
Sbjct: 553 VATTS-ERIYQK-PHIAPLSSLLQCLPSSVGSTDKKGTALGARRNSRLPRDAD--LVTTL 608

Query: 592 FATTSMYLSHSCKSGARLPIICQKQPLGQVGMYSQLANSCTVVFLN 637
            +T     S +C+      ++C K+  GQ G Y QL NSCT VFLN
Sbjct: 609 ISTKFKCHSRTCRFVEGFSVMCHKRFQGQRGTY-QLTNSCTPVFLN 653


>gi|356527777|ref|XP_003532484.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Glycine max]
          Length = 583

 Score =  672 bits (1733), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/570 (58%), Positives = 425/570 (74%), Gaps = 11/570 (1%)

Query: 68  SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           SC+TV + TKLMN+LI +GKP EAQA+FNNL E GHKP+L+TYTTL+AALT QKRF SI 
Sbjct: 18  SCQTVHARTKLMNTLIGKGKPHEAQAVFNNLTEEGHKPTLITYTTLVAALTRQKRFKSIP 77

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           +++S+V +NGM PDSI  NA+INAFSESG ++EAM  F KMKE G  PTTSTYNTLIKG+
Sbjct: 78  ALLSKVADNGMKPDSILLNAMINAFSESGKVDEAMKIFQKMKEYGCKPTTSTYNTLIKGF 137

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
           GIAG+P ES+KLL++M ++ NVKPN RTYN+L++AWC +K + EAWNV+HKM ASG++PD
Sbjct: 138 GIAGRPYESMKLLEMMGQDENVKPNDRTYNILIQAWCTKKKLEEAWNVLHKMVASGIQPD 197

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           VVTYNT+A AYAQNGE ++AE +I++M +N V+PN RTCGIIISGYCKEG + EALRF  
Sbjct: 198 VVTYNTMARAYAQNGETERAERLILKMPYNIVKPNERTCGIIISGYCKEGNMPEALRFLY 257

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            MKE GV PN V+FN LIKG+++  D +GVDE L LM+EF + PDV+T+STIMNAWS+AG
Sbjct: 258 RMKELGVDPNPVVFNSLIKGYLDTTDTNGVDEALTLMEEFGIKPDVVTFSTIMNAWSSAG 317

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            M+ C+EIF+DM KAGI+PD HAYSILAKGYVR  +P KAE LL +M + G  PNVVIFT
Sbjct: 318 LMENCEEIFNDMVKAGIEPDIHAYSILAKGYVRAGQPRKAEALLTSMSKYGVQPNVVIFT 377

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           TIISGWC+ G MDRA  + +KM E G SPNLKT+ETL+WGY EA+QPW+AEE+L  M+  
Sbjct: 378 TIISGWCAAGKMDRAFRLCEKMHEMGTSPNLKTYETLIWGYGEAKQPWKAEELLTTMEER 437

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEED---IPVESLERLYH 544
           GV P+ ST  L+A+A RA GL KEA RIL+     E  +E++ E D   I V+SLE +Y 
Sbjct: 438 GVVPEMSTMQLVADAWRAIGLFKEANRILN---GSEEESELDQEFDSDKIQVQSLESIYK 494

Query: 545 KEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYLSHSCK 604
           K+  +AS  NLLQIP+VV +    +     + RM+++ +D+        TTSM+   +  
Sbjct: 495 KQKLSASPSNLLQIPDVVVTHPTRTTNGNIRCRMVVKLSDNMRN----VTTSMFFVRTRS 550

Query: 605 SGARLPIICQKQPLGQVGMYSQLANSCTVV 634
           S    P+I  +Q + Q  +     + C VV
Sbjct: 551 SYGVQPLIVSRQQI-QNQVVRPFLDCCRVV 579


>gi|356565780|ref|XP_003551115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Glycine max]
          Length = 622

 Score =  670 bits (1729), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 326/552 (59%), Positives = 413/552 (74%), Gaps = 12/552 (2%)

Query: 18  QSGSTIVKKGWGQMIPAKKN-NPGEKKQLYSN-----------SKPTDSQPQTHCSFCMN 65
           QS + +  KGW  +     N +P   K++  N           +K T+S  Q  C+FCM 
Sbjct: 64  QSTTKMENKGWDPITFGYSNASPQRIKEIKGNHFDGKNRMNEITKATNSGSQPGCTFCMG 123

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           K  C+ V+S TK+MN LI+ GKPQEA  IF NLIEGGH+PSL TYTTLL ALT QK F  
Sbjct: 124 KNDCQVVQSRTKVMNILIKSGKPQEAIVIFQNLIEGGHQPSLATYTTLLNALTTQKYFKP 183

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
           IHSI+S VEE  M PDS FFNA++NAF+E GN+E+A     KMKESGL P+  TYNTLIK
Sbjct: 184 IHSIVSLVEEKQMKPDSRFFNALVNAFAEFGNIEDAKKVVQKMKESGLKPSACTYNTLIK 243

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           GYGIAGKP+ES+KLLDLMS EGNVKPNL+T N+L+RA C  ++ +EAWNV++KM  SGM+
Sbjct: 244 GYGIAGKPDESIKLLDLMSIEGNVKPNLKTCNMLIRALCKMEHTSEAWNVVYKMTTSGMQ 303

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PDVV++NT+A +YAQNG+  Q E +I+EM  NG++PN RTC IIISGYC+EGK++EALRF
Sbjct: 304 PDVVSFNTVAISYAQNGKTVQVEAMILEMRRNGLKPNDRTCTIIISGYCREGKVREALRF 363

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              +K+ G+ PNL+I N L+ GFV+ MDRDGV+EVL LM+EF + PDVITYSTIMNAWS 
Sbjct: 364 VYRIKDLGLQPNLIILNSLVNGFVDTMDRDGVNEVLNLMEEFYIRPDVITYSTIMNAWSQ 423

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
           AGF++KCKEI+++M K+G+KPD HAYSILAKGYVR QE EKAEELL  M +SG  PNVVI
Sbjct: 424 AGFLEKCKEIYNNMLKSGVKPDGHAYSILAKGYVRAQEMEKAEELLTVMTKSGVQPNVVI 483

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           FTT++SGWCS G MD A+ VFDKM E GVSPNLKTFETL+WGY+EA+QPW+AE +LQIM+
Sbjct: 484 FTTVMSGWCSVGRMDNAMRVFDKMGEFGVSPNLKTFETLIWGYAEAKQPWKAEGMLQIME 543

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHK 545
            F V P+KST LL+AEA    GL + AK +L  +K ++  N ++ + +I  +  E++  K
Sbjct: 544 EFHVQPKKSTILLVAEAWCFAGLKEGAKTLLITVKTEKMINSIDGDNNITAKMSEKICQK 603

Query: 546 EATTASYPNLLQ 557
             T A + +LL+
Sbjct: 604 PHTNAPFCSLLK 615


>gi|449467169|ref|XP_004151297.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Cucumis sativus]
 gi|449518833|ref|XP_004166440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g21222-like [Cucumis sativus]
          Length = 609

 Score =  668 bits (1723), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 334/598 (55%), Positives = 432/598 (72%), Gaps = 15/598 (2%)

Query: 41  EKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIE 100
           +K Q+   S P DSQ Q+ C  C+   SC TVRS TKLMN L+ERGKPQEAQ IFN+L+E
Sbjct: 26  QKNQVKLVSTPVDSQIQSRCLLCLGNNSCGTVRSRTKLMNILVERGKPQEAQFIFNSLVE 85

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
            GH+P+ VTYT L+AALT QKRF +I  ++S++EE G+ PDSI  NA+INAFSESGN++E
Sbjct: 86  QGHRPTTVTYTALVAALTRQKRFKAISGLLSEMEETGIKPDSILLNAIINAFSESGNVKE 145

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           AM+ F KM+ESG  PTTST+NTLIKGYGI  KPEES+KLL+LM+R  N+KPN RTYN+LV
Sbjct: 146 AMEIFQKMEESGCKPTTSTFNTLIKGYGIIRKPEESMKLLELMTRTTNLKPNNRTYNILV 205

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
            A C +K+I EAWNV+H+M ASG++PDVVTYNT+A AYAQ+GE ++AE +IV+M +  V 
Sbjct: 206 GALCKKKSIKEAWNVVHQMLASGVQPDVVTYNTLARAYAQDGETNKAESIIVDMLNKKVN 265

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           PN RTCGII+ GYC++G + EALR    M++ G+HPNLVIFN LIKGF++I D DGVD+ 
Sbjct: 266 PNERTCGIIVGGYCEQGNLAEALRVVYRMRDLGIHPNLVIFNSLIKGFLDIGDSDGVDKA 325

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L +M+E  V PDVIT+STIMN WS+AG MDKC+EIFDDM K+GI+PD H +SILAKG+VR
Sbjct: 326 LTMMEESGVKPDVITFSTIMNGWSSAGRMDKCQEIFDDMLKSGIEPDIHVFSILAKGFVR 385

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
             EP KAE LL  M + G  PNVVIFTTIISGWC+ G M++A +VF+ MC+  VSPNLKT
Sbjct: 386 AGEPVKAESLLNFMSKYGVRPNVVIFTTIISGWCTAGKMEKAWKVFEHMCDMDVSPNLKT 445

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           FETL+WGY EA+QPWRAEEILQ+M+   V P+ ST  L++EA R+ G+  +AK       
Sbjct: 446 FETLIWGYGEAKQPWRAEEILQMMEEMNVVPENSTLKLVSEAWRSIGMVNDAK------- 498

Query: 521 NKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLL 580
             ERT E E    IP  + ER++ +E   ASY NLL+   V+ S+  GS+ +  + R L 
Sbjct: 499 -AERTEENE----IPWRNSERIHEEEGPHASYSNLLKSEIVIVSNGNGSSYSQTRSRTLP 553

Query: 581 RDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPLGQVGMYSQLA-NSCTVVFLN 637
           +  +         +TSM L  +  S  R  I+C  Q   Q  ++ Q A  +C ++F++
Sbjct: 554 KGVEVPSGRPRSTSTSMLLRQTRPS--RPLILCHIQNQTQFWIWRQHATTTCRMMFIH 609


>gi|3107905|dbj|BAA25906.1| leaf protein [Ipomoea nil]
          Length = 665

 Score =  630 bits (1626), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 308/558 (55%), Positives = 400/558 (71%), Gaps = 13/558 (2%)

Query: 1   MGKFAEGKAFLQTDDKYQSGSTIVKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHC 60
           MG+F +  A ++ + K     T+  K      P  +++  E +    ++  +       C
Sbjct: 1   MGEFGKEAAIVRKNKK----GTVASKSQISASPTMESHLHEGEAHLVSTPVSYPTQVVRC 56

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           + C   + C+TVRS TKLM +LIERGKPQE  +I   L E GH+P+LVTYTT+LAALT+Q
Sbjct: 57  TACWGNDGCQTVRSRTKLMKTLIERGKPQEVHSITKGLTEEGHRPTLVTYTTVLAALTLQ 116

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
           KRF SI  ++ +VE+NG+ PDSIFFN +INAF ESGN++EAM  F KM+E G  PT ST+
Sbjct: 117 KRFKSIPLLLKKVEQNGLRPDSIFFNPMINAFCESGNVKEAMKIFRKMREKGCKPTASTF 176

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           N LIKG+GI GKPEES KLL++MSRE N+KP+ RTYN+LV+AWCN+ NI +AW V+H+M 
Sbjct: 177 NALIKGFGIIGKPEESSKLLEIMSREENIKPDDRTYNILVQAWCNKNNIEKAWGVVHRMV 236

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
            +G+KPDVVTYNTIA AYA+  E  +A E+I +M++N V PN RTCGI++ GY KEG + 
Sbjct: 237 GAGLKPDVVTYNTIARAYARGKETSRAAELISQMQNNKVAPNVRTCGIVVDGYSKEGNMA 296

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           +AL+F   M+ +GVHPNL IFN L+KGF++I D  GVDE L LM+EF V PDV+TYSTIM
Sbjct: 297 DALKFIYKMQGFGVHPNLFIFNSLLKGFLDITDTKGVDETLTLMQEFGVKPDVVTYSTIM 356

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           NAWS+AG M+KC+E+F DM K+GI+PD HA+SILAKGYVR  EP+KAE LL  M   G H
Sbjct: 357 NAWSSAGLMEKCEEMFQDMIKSGIEPDNHAFSILAKGYVRAGEPKKAEALLEAMATHGAH 416

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PNVV+FTTIISGWCS   M+ A+ V+D+MC   V PNL TFETL+WGY EA +PW+AEE+
Sbjct: 417 PNVVMFTTIISGWCSAAKMEDALRVYDRMCRMDVQPNLNTFETLIWGYGEANEPWKAEEL 476

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK---ERTNEMEAEEDIPVE 537
           LQIM+  GV P+K+T  L+A+A RA G   EAKRIL+  ++     RT+E   EED    
Sbjct: 477 LQIMEEMGVLPRKNTVQLVADAWRAIGFINEAKRILNDDQSSVLIPRTDEKPVEED---- 532

Query: 538 SLERLYHKEATTASYPNL 555
            L+R+Y +E T  SY  L
Sbjct: 533 -LQRVY-QEKTNGSYKTL 548


>gi|357521009|ref|XP_003630793.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524815|gb|AET05269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 584

 Score =  622 bits (1603), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 304/542 (56%), Positives = 395/542 (72%), Gaps = 23/542 (4%)

Query: 44  QLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH 103
           Q  S+S P ++  ++ C  CM   SC+TV S TKLM++LI +GKP EA  IFN+L E GH
Sbjct: 15  QSKSSSNPEETCDESRCLICMGSNSCQTVISRTKLMSTLIRKGKPHEAVTIFNSLTEEGH 74

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           KP+++TYTTL+AALT  KRFNSI S++S+VEENG+ PDSI FNA+INAFS+SG + EAM 
Sbjct: 75  KPTIITYTTLVAALTRLKRFNSIPSLLSKVEENGVKPDSILFNAMINAFSDSGKVHEAMK 134

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
            F KMKE G  PTTST+NTLIKG+GI G+P E++KLL++M ++GNVKPN RTYN+L++AW
Sbjct: 135 IFRKMKECGCKPTTSTFNTLIKGFGIVGRPHEAMKLLEMMIQDGNVKPNERTYNILIQAW 194

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME--HNGVQP 281
           C +  + EAWNVMHKM  SGM+PD+VTYNT+A A+AQNGE D AE +I++M+  +N V+P
Sbjct: 195 CTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILKMQQYNNKVKP 254

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N RTCGIII GYCKEG + EALRF   MKE GVHPN V+FN LIKG+++I D DGV+E L
Sbjct: 255 NERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDITDTDGVEEAL 314

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
            LM+EF + PDV+TYSTIMNAWS++G MD C+EIFDDM KA I+PD  AYSILAKGYVR 
Sbjct: 315 TLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQAYSILAKGYVRA 374

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            +P+KAE LL +M + G   NVVIFTTIISGWC+ G MD A+ +++KM E G   NLKT+
Sbjct: 375 GQPDKAEALLNSMTKYGLQANVVIFTTIISGWCAAGKMDCALRLYEKMNEMGTPLNLKTY 434

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           ETL+WGY EA+QPW+AEE+L  M+  GV P+ ST  L+      +   +   +       
Sbjct: 435 ETLIWGYGEAKQPWKAEELLVTMEESGVAPEMSTIELVQMLEEESEFDESFDK------- 487

Query: 522 KERTNEMEAEEDIPVESLERLYHKEATTASYP-NLLQIPN-VVSSDQKGSAAALKKGRML 579
                       IP +SL+R+Y K+   AS   NLLQ+P+ VV+  ++ S  A  K +M+
Sbjct: 488 ------------IPGQSLDRIYKKQKLGASQSNNLLQMPDIVVAQPERTSNNANIKSQMI 535

Query: 580 LR 581
           ++
Sbjct: 536 VK 537


>gi|224142151|ref|XP_002324422.1| predicted protein [Populus trichocarpa]
 gi|222865856|gb|EEF02987.1| predicted protein [Populus trichocarpa]
          Length = 453

 Score =  620 bits (1600), Expect = e-175,   Method: Compositional matrix adjust.
 Identities = 294/454 (64%), Positives = 367/454 (80%), Gaps = 1/454 (0%)

Query: 60  CSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           C  C+    CR VRS TKLMN LI +GKP+EA +IFN+L++ GHKP+L+TYTTL+AALT 
Sbjct: 1   CPICLGNNRCRIVRSRTKLMNVLIGKGKPREAHSIFNSLMDEGHKPTLITYTTLVAALTR 60

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
           QK F SI  ++S+VEENGM PDSI FN++INAFSESGNM+EAM  F KMKESG  PTTST
Sbjct: 61  QKLFKSILRLISKVEENGMKPDSILFNSIINAFSESGNMKEAMKLFRKMKESGCKPTTST 120

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           +NTLIKGYG AGK EE++KLL+ + ++G VKPN RTYN+LVRAWCN++N+ EAWN+++KM
Sbjct: 121 FNTLIKGYGNAGKTEEALKLLEFL-QDGGVKPNQRTYNILVRAWCNKENMEEAWNMVYKM 179

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
            ASGM+PD VTYNT+A AYA+ GE  +AEE+I+EM +  V PN RTC II++GYCKEG +
Sbjct: 180 VASGMQPDAVTYNTLARAYAEKGETIRAEEMILEMLNRRVTPNERTCSIIVNGYCKEGNM 239

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            +A RF   MKE GV PNL +FN LIKGF++ MD +GVDEVL LM+E  V PDV+T+STI
Sbjct: 240 VDASRFVFRMKELGVLPNLFVFNSLIKGFLDTMDTEGVDEVLTLMEENGVRPDVVTFSTI 299

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           MNAWS+AG MDKCKEIF+DM KA I+PD HA+SILAKGYVR  EPEKAE +L +M + G 
Sbjct: 300 MNAWSSAGRMDKCKEIFNDMVKAEIEPDIHAFSILAKGYVRAGEPEKAESILTSMRKYGV 359

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
           HPNVVI TT+ISGWCS G M+ A++V++KMCE GVSPNLKT+ETL+WGY EA+QP +AEE
Sbjct: 360 HPNVVICTTVISGWCSAGKMEHAMKVYEKMCEIGVSPNLKTYETLIWGYGEAKQPLKAEE 419

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           +LQ+M+  GV P+K T  L+A+A RA GL  E++
Sbjct: 420 LLQVMEEKGVFPKKGTMQLIADAWRAIGLLSESE 453



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 150/293 (51%)

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
           EA ++ + +   G KP ++TY T+  A  +         +I ++E NG++P+      II
Sbjct: 31  EAHSIFNSLMDEGHKPTLITYTTLVAALTRQKLFKSILRLISKVEENGMKPDSILFNSII 90

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
           + + + G +KEA++  R MKE G  P    FN LIKG+      +   ++L  +++  V 
Sbjct: 91  NAFSESGNMKEAMKLFRKMKESGCKPTTSTFNTLIKGYGNAGKTEEALKLLEFLQDGGVK 150

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P+  TY+ ++ AW     M++   +   M  +G++PDA  Y+ LA+ Y  + E  +AEE+
Sbjct: 151 PNQRTYNILVRAWCNKENMEEAWNMVYKMVASGMQPDAVTYNTLARAYAEKGETIRAEEM 210

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           ++ M+     PN    + I++G+C +G+M  A     +M E GV PNL  F +L+ G+ +
Sbjct: 211 ILEMLNRRVTPNERTCSIIVNGYCKEGNMVDASRFVFRMKELGVLPNLFVFNSLIKGFLD 270

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
                  +E+L +M+  GV P   TF  +  A  + G   + K I + +   E
Sbjct: 271 TMDTEGVDEVLTLMEENGVRPDVVTFSTIMNAWSSAGRMDKCKEIFNDMVKAE 323


>gi|255551050|ref|XP_002516573.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544393|gb|EEF45914.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 396

 Score =  593 bits (1529), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 283/399 (70%), Positives = 327/399 (81%), Gaps = 3/399 (0%)

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  SG +PDVVTYNTIATAY +N E + AEE+I EM++ GVQPN RTCG +ISGYCKEG+
Sbjct: 1   MVVSGRQPDVVTYNTIATAYVRNEETNLAEEMISEMQNTGVQPNERTCGTVISGYCKEGR 60

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           IKEALRF   MKE GVHPNLV+FN LIKGFV+IMDR+GVDEVL LM+EF V PDVIT+ST
Sbjct: 61  IKEALRFVHRMKELGVHPNLVVFNSLIKGFVDIMDRNGVDEVLKLMEEFNVKPDVITFST 120

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           IMNAWS AG+M+KC+EIFDDM KAGI+PD HAYSILAKGYVR QEPEKAE+LL TM+ESG
Sbjct: 121 IMNAWSKAGYMNKCREIFDDMMKAGIQPDGHAYSILAKGYVRAQEPEKAEQLLTTMMESG 180

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
           FHPNVVIFTT+ISGWCS   MD AI VFDKMCE+G+SPNLKTFETL+ G+SEA+QPW+AE
Sbjct: 181 FHPNVVIFTTVISGWCSTDRMDCAIRVFDKMCEYGISPNLKTFETLIGGFSEAKQPWKAE 240

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVES 538
           +ILQIM+ + V P+KST LL+AEA  + GLTKE  RIL+ I    R  +  AEED+PVES
Sbjct: 241 DILQIMREYNVEPKKSTMLLVAEAWGSIGLTKEVNRILNTIN---RNKKDSAEEDVPVES 297

Query: 539 LERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMY 598
           LE+LY KE T+ SY N LQIPN V ++QKGS A LKKGRM+LRD D S+E SW AT S+ 
Sbjct: 298 LEKLYQKENTSFSYSNYLQIPNTVINEQKGSTACLKKGRMVLRDTDFSMEYSWLATKSLC 357

Query: 599 LSHSCKSGARLPIICQKQPLGQVGMYSQLANSCTVVFLN 637
           LSH+CK GARLPIIC KQ  GQ G+Y  LA SCT VFLN
Sbjct: 358 LSHTCKLGARLPIICYKQFQGQHGIYGPLAQSCTAVFLN 396



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 145/284 (51%), Gaps = 1/284 (0%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           ++  G +P +VTY T+  A    +  N    ++S+++  G+ P+      VI+ + + G 
Sbjct: 1   MVVSGRQPDVVTYNTIATAYVRNEETNLAEEMISEMQNTGVQPNERTCGTVISGYCKEGR 60

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           ++EA+    +MKE G+ P    +N+LIKG+          ++L LM  E NVKP++ T++
Sbjct: 61  IKEALRFVHRMKELGVHPNLVVFNSLIKGFVDIMDRNGVDEVLKLM-EEFNVKPDVITFS 119

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++ AW     + +   +   M  +G++PD   Y+ +A  Y +  E ++AE+++  M  +
Sbjct: 120 TIMNAWSKAGYMNKCREIFDDMMKAGIQPDGHAYSILAKGYVRAQEPEKAEQLLTTMMES 179

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G  PN      +ISG+C   ++  A+R    M EYG+ PNL  F  LI GF E       
Sbjct: 180 GFHPNVVIFTTVISGWCSTDRMDCAIRVFDKMCEYGISPNLKTFETLIGGFSEAKQPWKA 239

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           +++L +M+E+ V P   T   +  AW + G   +   I + + +
Sbjct: 240 EDILQIMREYNVEPKKSTMLLVAEAWGSIGLTKEVNRILNTINR 283



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 72/270 (26%), Positives = 133/270 (49%), Gaps = 1/270 (0%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M  SG  P   TYNT+   Y    +   + +++  M   G V+PN RT   ++  +C E 
Sbjct: 1   MVVSGRQPDVVTYNTIATAYVRNEETNLAEEMISEMQNTG-VQPNERTCGTVISGYCKEG 59

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
            I EA   +H+M   G+ P++V +N++   +    + +  +EV+  ME   V+P+  T  
Sbjct: 60  RIKEALRFVHRMKELGVHPNLVVFNSLIKGFVDIMDRNGVDEVLKLMEEFNVKPDVITFS 119

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
            I++ + K G + +       M + G+ P+   +++L KG+V   + +  +++L  M E 
Sbjct: 120 TIMNAWSKAGYMNKCREIFDDMMKAGIQPDGHAYSILAKGYVRAQEPEKAEQLLTTMMES 179

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
             +P+V+ ++T+++ W +   MD    +FD M + GI P+   +  L  G+   ++P KA
Sbjct: 180 GFHPNVVIFTTVISGWCSTDRMDCAIRVFDKMCEYGISPNLKTFETLIGGFSEAKQPWKA 239

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           E++L  M E    P       +   W S G
Sbjct: 240 EDILQIMREYNVEPKKSTMLLVAEAWGSIG 269



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 122/245 (49%), Gaps = 7/245 (2%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           N+ +C TV      ++   + G+ +EA    + + E G  P+LV + +L+         N
Sbjct: 44  NERTCGTV------ISGYCKEGRIKEALRFVHRMKELGVHPNLVVFNSLIKGFVDIMDRN 97

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
            +  ++  +EE  + PD I F+ ++NA+S++G M +  + F  M ++G+ P    Y+ L 
Sbjct: 98  GVDEVLKLMEEFNVKPDVITFSTIMNAWSKAGYMNKCREIFDDMMKAGIQPDGHAYSILA 157

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           KGY  A +PE++ +LL  M   G   PN+  +  ++  WC+   +  A  V  KM   G+
Sbjct: 158 KGYVRAQEPEKAEQLLTTMMESG-FHPNVVIFTTVISGWCSTDRMDCAIRVFDKMCEYGI 216

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P++ T+ T+   +++  +  +AE+++  M    V+P   T  ++   +   G  KE  R
Sbjct: 217 SPNLKTFETLIGGFSEAKQPWKAEDILQIMREYNVEPKKSTMLLVAEAWGSIGLTKEVNR 276

Query: 305 FARTM 309
              T+
Sbjct: 277 ILNTI 281



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/226 (22%), Positives = 109/226 (48%), Gaps = 1/226 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+ + + +   G +P+  T  T+++    + R       + +++E G+ P+ + FN++I 
Sbjct: 29  AEEMISEMQNTGVQPNERTCGTVISGYCKEGRIKEALRFVHRMKELGVHPNLVVFNSLIK 88

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            F +  +     +    M+E  + P   T++T++  +  AG   +  ++ D M + G ++
Sbjct: 89  GFVDIMDRNGVDEVLKLMEEFNVKPDVITFSTIMNAWSKAGYMNKCREIFDDMMKAG-IQ 147

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P+   Y++L + +   +   +A  ++  M  SG  P+VV + T+ + +      D A  V
Sbjct: 148 PDGHAYSILAKGYVRAQEPEKAEQLLTTMMESGFHPNVVIFTTVISGWCSTDRMDCAIRV 207

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
             +M   G+ PN +T   +I G+ +  +  +A    + M+EY V P
Sbjct: 208 FDKMCEYGISPNLKTFETLIGGFSEAKQPWKAEDILQIMREYNVEP 253



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 30/128 (23%), Positives = 64/128 (50%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L    +   +P++A+ +   ++E G  P++V +TT+++      R +    +  ++ E G
Sbjct: 156 LAKGYVRAQEPEKAEQLLTTMMESGFHPNVVIFTTVISGWCSTDRMDCAIRVFDKMCEYG 215

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   F  +I  FSE+    +A D    M+E  + P  ST   + + +G  G  +E  
Sbjct: 216 ISPNLKTFETLIGGFSEAKQPWKAEDILQIMREYNVEPKKSTMLLVAEAWGSIGLTKEVN 275

Query: 198 KLLDLMSR 205
           ++L+ ++R
Sbjct: 276 RILNTINR 283


>gi|29294052|gb|AAO73889.1| protein kinase family [Arabidopsis thaliana]
          Length = 854

 Score =  568 bits (1465), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 272/478 (56%), Positives = 362/478 (75%), Gaps = 3/478 (0%)

Query: 35  KKNNPGEKKQLYSNSKPTDSQPQTH-CSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQA 93
           K+ N  + + ++ +S+    Q ++  C  C    +C  VRS TKLMN LIERG+PQEA +
Sbjct: 304 KEANLADVEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHS 363

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           IFN LIE GHKPSL+TYTTL+ ALT QK F+S+ S++S+VE+NG+ PD+I FNA+INA S
Sbjct: 364 IFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS 423

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           ESGN+++AM  F KMKESG  PT ST+NTLIKGYG  GK EES +LLD+M R+  ++PN 
Sbjct: 424 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPND 483

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV- 272
           RT N+LV+AWCN++ I EAWN+++KM + G+KPDVVT+NT+A AYA+ G    AE++I+ 
Sbjct: 484 RTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIP 543

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
            M HN V+PN RTCG I++GYC+EGK++EALRF   MKE GVHPNL +FN LIKGF+ I 
Sbjct: 544 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN 603

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           D DGV EV+ LM+EF V PDV+T+ST+MNAWS+ G M +C+EI+ DM + GI PD HA+S
Sbjct: 604 DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFS 663

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE- 451
           ILAKGY R  EPEKAE++L  M + G  PNVVI+T IISGWCS G M +A++V+ KMC  
Sbjct: 664 ILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGI 723

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
            G+SPNL T+ETL+WG+ EA+QPW+AEE+L+ M+   V P + T  L+A+  ++ G++
Sbjct: 724 VGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVS 781


>gi|42570531|ref|NP_850859.2| SNF1-like protein kinase [Arabidopsis thaliana]
 gi|75160582|sp|Q8S9D1.1|PP395_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g21222; AltName: Full=SNF1-like protein kinase AtC401
 gi|19071860|dbj|BAB85674.1| SNF1-like protein kinase [Arabidopsis thaliana]
 gi|332005563|gb|AED92946.1| SNF1-like protein kinase [Arabidopsis thaliana]
          Length = 831

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 272/478 (56%), Positives = 362/478 (75%), Gaps = 3/478 (0%)

Query: 35  KKNNPGEKKQLYSNSKPTDSQPQTH-CSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQA 93
           K+ N  + + ++ +S+    Q ++  C  C    +C  VRS TKLMN LIERG+PQEA +
Sbjct: 281 KEANLADVEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHS 340

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           IFN LIE GHKPSL+TYTTL+ ALT QK F+S+ S++S+VE+NG+ PD+I FNA+INA S
Sbjct: 341 IFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS 400

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           ESGN+++AM  F KMKESG  PT ST+NTLIKGYG  GK EES +LLD+M R+  ++PN 
Sbjct: 401 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPND 460

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV- 272
           RT N+LV+AWCN++ I EAWN+++KM + G+KPDVVT+NT+A AYA+ G    AE++I+ 
Sbjct: 461 RTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIP 520

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
            M HN V+PN RTCG I++GYC+EGK++EALRF   MKE GVHPNL +FN LIKGF+ I 
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN 580

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           D DGV EV+ LM+EF V PDV+T+ST+MNAWS+ G M +C+EI+ DM + GI PD HA+S
Sbjct: 581 DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFS 640

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE- 451
           ILAKGY R  EPEKAE++L  M + G  PNVVI+T IISGWCS G M +A++V+ KMC  
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGI 700

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
            G+SPNL T+ETL+WG+ EA+QPW+AEE+L+ M+   V P + T  L+A+  ++ G++
Sbjct: 701 VGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVS 758


>gi|19071826|dbj|BAB85657.1| PnC401 homologue [Arabidopsis thaliana]
          Length = 831

 Score =  566 bits (1458), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 271/478 (56%), Positives = 362/478 (75%), Gaps = 3/478 (0%)

Query: 35  KKNNPGEKKQLYSNSKPTDSQPQTH-CSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQA 93
           K+ N  + + ++ +S+    Q ++  C  C    +C  VRS TKLMN LIERG+PQEA +
Sbjct: 281 KEANLADVEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHS 340

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           IFN LIE GHKPSL+TYTTL+ ALT QK F+S+ S++S+VE+NG+ PD+I FNA+INA S
Sbjct: 341 IFNTLIEEGHKPSLITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASS 400

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           ESGN+++AM  F KMKESG  PT ST+NTLIKGYG  GK EES +LLD+M R+  ++PN 
Sbjct: 401 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLDMMLRDEMLQPND 460

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV- 272
           RT N+LV+AWCN++ I EAWN+++KM + G+KPDVVT+NT+A AYA+ G    AE++I+ 
Sbjct: 461 RTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGSTCTAEDMIIP 520

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
            M HN V+PN RTCG I++GYC+EGK++EALRF   MKE GVHPNL +FN LIKGF+ I 
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN 580

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           D DGV EV+ LM+EF V PDV+T+ST+MNAWS+ G M +C+EI+ DM + GI PD HA+S
Sbjct: 581 DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYTDMLEGGIDPDIHAFS 640

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE- 451
           ILAKGY R  EPEKA+++L  M + G  PNVVI+T IISGWCS G M +A++V+ KMC  
Sbjct: 641 ILAKGYARAGEPEKAKQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYKKMCGI 700

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
            G+SPNL T+ETL+WG+ EA+QPW+AEE+L+ M+   V P + T  L+A+  ++ G++
Sbjct: 701 VGLSPNLTTYETLIWGFGEAKQPWKAEELLKDMEGKNVVPTRKTMQLIADGWKSIGVS 758


>gi|242049534|ref|XP_002462511.1| hypothetical protein SORBIDRAFT_02g027050 [Sorghum bicolor]
 gi|241925888|gb|EER99032.1| hypothetical protein SORBIDRAFT_02g027050 [Sorghum bicolor]
          Length = 643

 Score =  561 bits (1445), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 287/605 (47%), Positives = 401/605 (66%), Gaps = 19/605 (3%)

Query: 41  EKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIE 100
           EK +     +P+  Q    C+ C    +C++V + T+ M +LI+  KP +A ++F +L+E
Sbjct: 41  EKHEYNGTLQPSKGQKPQLCTTCAKGHTCQSVINRTRQMRALIDSNKPYQAHSVFKHLME 100

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
            GHKPSLVTYT LL ALT Q+ F SI S+++QVE  G+ PDSIFFNA+INAF E+  M E
Sbjct: 101 EGHKPSLVTYTILLTALTNQRMFESIPSLLAQVELAGIRPDSIFFNALINAFVEAKRMGE 160

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A++TFWKMK SG  PTTST+NTLIKGYGI GKPEES ++ D+M  EG++KPNL TYN+LV
Sbjct: 161 AINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGIEGSIKPNLTTYNILV 220

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           +AWC+ +N+ EAW V+ KM A G++PD+VTYNTIA+AYA N E  +AEE+IVE++   V+
Sbjct: 221 KAWCDRRNLEEAWGVVGKMRAGGVEPDIVTYNTIASAYANNDETWRAEELIVEIQTR-VR 279

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
            + RT GIII GYC+E +++EALR  + MK+ G+ PN+VIFN L+KGF+++ D   V+ +
Sbjct: 280 TSERTWGIIIGGYCRESRLEEALRCVQQMKDAGIVPNVVIFNTLLKGFLDVNDMAAVNNI 339

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L LM++F + PD++TYS  +N +S+ G M KC ++FD M +AGI+PD   YSILAKG+VR
Sbjct: 340 LGLMEQFGIKPDIVTYSHQLNTFSSLGHMAKCMKVFDKMIEAGIEPDPQVYSILAKGFVR 399

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
            ++PEKAE+LL+ M   G  PNVV FTT+ISGWCS   M+ A+ V++KMC+ GV PNL+T
Sbjct: 400 AKQPEKAEDLLLQMSHLGVCPNVVTFTTVISGWCSVADMESAMRVYEKMCKSGVYPNLRT 459

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR------ 514
           FETL+WGYSE +QPW+AEE+LQ+M+  GV P++ST  L+A+A +A GL +          
Sbjct: 460 FETLIWGYSEQKQPWKAEEVLQMMRETGVKPKESTHRLIADAWKAVGLIENINNSNGSPN 519

Query: 515 ---ILSKIKNK-ERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSA 570
               + K+ +  +  N   +E+D  ++S +    +     S  + LQI N +      SA
Sbjct: 520 GPYAIDKLDDSDDNCNVQISEDDNKLQSFDESKGRAMNGRSRSSFLQITNALGCGGIVSA 579

Query: 571 AALKKGRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPLGQVGMYSQLANS 630
             LK G         S        TS +L  S +        C+KQ L   G YSQ  +S
Sbjct: 580 KVLKVGEF------PSERLKAIKNTS-FLQRSQRFQLLHLEFCRKQ-LKNGGFYSQSISS 631

Query: 631 CTVVF 635
             +VF
Sbjct: 632 FKMVF 636


>gi|195613918|gb|ACG28789.1| leaf protein [Zea mays]
          Length = 637

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 273/547 (49%), Positives = 378/547 (69%), Gaps = 12/547 (2%)

Query: 41  EKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIE 100
           EK +     +P+  Q Q  C+ C    +C++V + T+ M +LI+  KP +A ++F +L++
Sbjct: 36  EKHEHGGTFQPSKGQKQQLCTTCAKGHTCQSVINRTRQMRALIDSKKPYQAHSVFKHLMD 95

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
            GHKPSLVTYT LL ALT Q+ F SI S++++VE  G+ PDSIFFNA+INAF E+  M E
Sbjct: 96  EGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIFFNALINAFVEAKRMGE 155

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A++TFWKMK SG  PTTST+NTLIKGYGI GKPEES ++ D+M  EG+V+PNL TYN+LV
Sbjct: 156 AINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVEGSVRPNLTTYNILV 215

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           +AWC+ +N+ EAW V+ KM A G +PD+VTYNTIA+AYA N E  +AEE+IVE++   V+
Sbjct: 216 KAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAEELIVEIQTR-VR 274

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
            + RT GIII GYC+EG+++EALR  + MK+ G  PN+VIFN L+KGF++  D   V+++
Sbjct: 275 TSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKI 334

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L LMK+F + PD++TYS  +N +S+ G M KC  +FD M +AGI+PD   YSILAKG+VR
Sbjct: 335 LGLMKKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVR 394

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
            Q+PEKAE+LL+ M   G  PNVV FTT+ISGWCS   M+ A+ V+DKMC+ GV PNL+T
Sbjct: 395 AQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKMCKSGVYPNLRT 454

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR------ 514
           FETL+WGYSE +QPW+AEE+LQ+M+  GV P++ST+ L+A+A +A GLT+          
Sbjct: 455 FETLIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCLIADAWKAVGLTENINNSNGSPN 514

Query: 515 ---ILSKIKNKERTNEMEAEED--IPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGS 569
               + K+ +      +   ED    ++  +    +     S  + LQI N + S    S
Sbjct: 515 GPYAIEKLDHSNDNCNVRISEDNNNKLQFFDESNGRAMNGRSRSSFLQITNALGSSGIVS 574

Query: 570 AAALKKG 576
           A  +K G
Sbjct: 575 AKVMKAG 581


>gi|414885834|tpg|DAA61848.1| TPA: leaf protein [Zea mays]
          Length = 637

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 272/547 (49%), Positives = 378/547 (69%), Gaps = 12/547 (2%)

Query: 41  EKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIE 100
           EK +     +P+  Q Q  C+ C    +C++V + T+ M +LI+  KP +A ++F +L++
Sbjct: 36  EKHEHGGTFQPSKGQKQQLCTTCAKGHTCQSVINRTRQMRALIDSKKPYQAHSVFKHLMD 95

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
            GHKPSLVTYT LL ALT Q+ F SI S++++VE  G+ PDSIFFNA+INAF E+  M E
Sbjct: 96  EGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIFFNALINAFVEAKRMGE 155

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A++TFWKMK SG  PTTST+NTLIKGYGI GKPEES ++ D+M  EG+V+PNL TYN+LV
Sbjct: 156 AINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVEGSVRPNLTTYNILV 215

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           +AWC+ +N+ EAW V+ KM A G +PD+VTYNTIA+AYA N E  +AEE+IVE++   V+
Sbjct: 216 KAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAEELIVEIQTR-VR 274

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
            + RT GIII GYC+EG+++EALR  + MK+ G  PN+VIFN L+KGF++  D   V+++
Sbjct: 275 TSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKI 334

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L LM++F + PD++TYS  +N +S+ G M KC  +FD M +AGI+PD   YSILAKG+VR
Sbjct: 335 LGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVR 394

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
            Q+PEKAE+LL+ M   G  PNVV FTT+ISGWCS   M+ A+ V+DKMC+ GV PNL+T
Sbjct: 395 AQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKMCKSGVYPNLRT 454

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR------ 514
           FETL+WGYSE +QPW+AEE+LQ+M+  GV P++ST+ L+A+A +A GLT+          
Sbjct: 455 FETLIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCLIADAWKAVGLTENINNSNGSPN 514

Query: 515 ---ILSKIKNKERTNEMEAEED--IPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGS 569
               + K+ +      +   ED    ++  +    +     S  + LQI N + S    S
Sbjct: 515 GPYAIEKLDHSNDNCNVRISEDNNNKLQFFDESNGRAMNGRSRSSFLQITNALGSSGIVS 574

Query: 570 AAALKKG 576
           A  +K G
Sbjct: 575 AKVMKAG 581


>gi|226533082|ref|NP_001141414.1| uncharacterized protein LOC100273524 [Zea mays]
 gi|194704512|gb|ACF86340.1| unknown [Zea mays]
          Length = 637

 Score =  554 bits (1428), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 271/547 (49%), Positives = 377/547 (68%), Gaps = 12/547 (2%)

Query: 41  EKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIE 100
           EK +     +P+  Q Q  C+ C    +C++V + T+ M +LI+  KP +A ++F +L++
Sbjct: 36  EKHEHGGTFQPSKGQKQQLCTTCAKGHTCQSVINRTRQMRALIDSKKPYQAHSVFKHLMD 95

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
            GHKPSLVTYT LL ALT Q+ F SI S++++VE  G+ PDSIFFNA+INAF E+  M E
Sbjct: 96  EGHKPSLVTYTILLTALTNQRMFESIPSLLAEVELAGVRPDSIFFNALINAFVEAKRMGE 155

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A++TFWKMK SG  PTTST+NTLIKGYGI GKPEES ++ D+M  EG+V+PNL TYN+LV
Sbjct: 156 AINTFWKMKHSGCHPTTSTFNTLIKGYGIVGKPEESQRVFDMMGVEGSVRPNLTTYNILV 215

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           +AWC+ +N+ EAW V+ KM A G +PD+VTYNTIA+AYA N E  +AEE+IVE++   V+
Sbjct: 216 KAWCDHRNLEEAWGVVGKMQAGGFEPDIVTYNTIASAYANNDETWRAEELIVEIQTR-VR 274

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
            + RT GIII GYC+EG+++EALR  + MK+ G  PN+VIFN L+KGF++  D   V+++
Sbjct: 275 TSERTWGIIIGGYCREGRLEEALRCVQQMKDAGSVPNVVIFNTLLKGFLDANDMAAVNKI 334

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L LM++F + PD++TYS  +N +S+ G M KC  +FD M +AGI+PD   YSILAKG+VR
Sbjct: 335 LGLMEKFGIKPDIVTYSHQLNTFSSLGHMAKCMHVFDKMIEAGIEPDPQVYSILAKGFVR 394

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
            Q+PEKAE+LL+ M   G  PNVV FTT+ISGWCS   M+ A+ V+DKMC+ GV PNL+T
Sbjct: 395 AQQPEKAEDLLLQMSHLGLCPNVVTFTTVISGWCSVADMESAMRVYDKMCKSGVYPNLRT 454

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR------ 514
           FET +WGYSE +QPW+AEE+LQ+M+  GV P++ST+ L+A+A +A GLT+          
Sbjct: 455 FETPIWGYSEQKQPWKAEEVLQMMRETGVKPKQSTYCLIADAWKAVGLTENINNSNGSPN 514

Query: 515 ---ILSKIKNKERTNEMEAEED--IPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGS 569
               + K+ +      +   ED    ++  +    +     S  + LQI N + S    S
Sbjct: 515 GPYAIEKLDHSNDNCNVRISEDNNNKLQFFDESNGRAMNGRSRSSFLQITNALGSSGIVS 574

Query: 570 AAALKKG 576
           A  +K G
Sbjct: 575 AKVMKAG 581


>gi|297808179|ref|XP_002871973.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
 gi|297317810|gb|EFH48232.1| kinase family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 831

 Score =  547 bits (1409), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 266/478 (55%), Positives = 361/478 (75%), Gaps = 3/478 (0%)

Query: 35  KKNNPGEKKQLYSNSKPTDSQPQTH-CSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQA 93
           K+ N  + + ++ +S+    Q ++  C  C    +C  VRS TKLMN LIERG+PQEA +
Sbjct: 281 KEANLADVEAVFKDSEEGRVQLRSFPCVICSGGTTCGDVRSRTKLMNGLIERGRPQEAHS 340

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           IFN LIE GHKPS++TYTTL+ ALT QK F+S+ S++S+V++NG+ PD+I FNA+INA S
Sbjct: 341 IFNTLIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVQKNGLRPDTILFNAIINASS 400

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           ESGN+++AM  F KMKESG  PT ST+NTLIKGYG  GK EES +LL++M R+  ++PN 
Sbjct: 401 ESGNLDQAMKIFEKMKESGCKPTASTFNTLIKGYGKIGKLEESSRLLEMMLRDEMLQPND 460

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV- 272
           RT N+LV+AWCN++ I EAWN+++KM + G+KPD VT+NT+A AY++ G    AE++I+ 
Sbjct: 461 RTCNILVQAWCNQRKIEEAWNIVYKMQSFGVKPDAVTFNTLARAYSRIGSTCTAEDMIIP 520

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
            M HN V+PN RTCG I++GYC+EGK++EALRF   MKE GVHPNL +FN LIKGF+ I 
Sbjct: 521 RMLHNKVKPNVRTCGTIVNGYCEEGKMEEALRFFYRMKELGVHPNLFVFNSLIKGFLNIN 580

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           D DGV EV+ LM+EF V PDV+T+ST+MNAWS+ G M +C+EI+ DM + GI PD HA+S
Sbjct: 581 DMDGVGEVVDLMEEFGVKPDVVTFSTLMNAWSSVGDMKRCEEIYRDMLEGGIDPDIHAFS 640

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM-CE 451
           ILAKGY R  EPEKAE++L  M + G  PNVVI+T IISGWCS G M +A++V++KM   
Sbjct: 641 ILAKGYARAGEPEKAEQILNQMRKFGVRPNVVIYTQIISGWCSAGEMKKAMQVYNKMRGS 700

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
            G+SPNL T+ETL+WG+ EA+QPW+AEE+L+ M+   V P + T  L+A+  ++ G++
Sbjct: 701 VGLSPNLTTYETLIWGFGEAKQPWKAEELLKEMEEKNVVPTRKTMQLIADGWKSIGVS 758


>gi|125525011|gb|EAY73125.1| hypothetical protein OsI_00999 [Oryza sativa Indica Group]
          Length = 634

 Score =  531 bits (1369), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 256/506 (50%), Positives = 359/506 (70%), Gaps = 18/506 (3%)

Query: 15  DKYQSGSTIVKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRS 74
           +K+++GS       G + P+     G+ KQL   S P   + +  C+ C    +C+ V +
Sbjct: 34  EKHEAGSN------GALHPSN----GQAKQL--PSPPQKQKQKLLCTTCGKGHTCQAVIA 81

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
            T+ M ++I+  +P +A + F +L++ GH+PSLVTYTTLLAALT Q+ F++I  ++++VE
Sbjct: 82  RTRQMRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQRAFDTIPWLLAEVE 141

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           + G+ PDSIFFNA+INA  E+  M EA +TF +M  SG  PT ST+NTLIKGYGIAG+PE
Sbjct: 142 DAGLRPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPE 201

Query: 195 ESVKLLDLMSREGN-----VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           ES ++ D+M+  G      V+PNL TYN+LV+AWC+   + EAW V+ +M ASG  PDVV
Sbjct: 202 ESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVV 261

Query: 250 TYNTIATAYAQNGEADQAEEVIVEM-EHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           TYNT+A+AYA+N E  +AEE++VEM +  G++ + RT GII+ GYC+EG++ EALR  R 
Sbjct: 262 TYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQ 321

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           MK+ GV PN+++FN L+KGF++  D   VD+VL LM++F + PD++TYS  +NA S+ G 
Sbjct: 322 MKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGH 381

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           M KC ++FD M +AGI+PD   YSILAKGYVR Q+PEKAEELL  M   G  PNVV FTT
Sbjct: 382 MAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTT 441

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +ISGWCS   M  A+ V+  M + GV PNL+TFETL+WGYSE +QPW+AEE+LQ+M+  G
Sbjct: 442 VISGWCSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAG 501

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKR 514
           V P+++T+ L+A+A +A GL + A R
Sbjct: 502 VRPKQTTYCLVADAWKAVGLVENANR 527


>gi|326492636|dbj|BAJ90174.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 631

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 272/607 (44%), Positives = 395/607 (65%), Gaps = 41/607 (6%)

Query: 53  DSQPQ-THCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYT 111
           D+QP  + C+ C    +C+ V S T+ M  LI+  KP +AQ +F +L + GH+PSLVTYT
Sbjct: 44  DAQPPPSTCTTCAKGHTCQAVVSRTREMRGLIDAKKPHQAQDLFGHLADEGHRPSLVTYT 103

Query: 112 TLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES 171
           TLL A+T Q+ F +I S+++ ++  G+ PD+IFFNA+IN+F E+G M EA  TFWKM   
Sbjct: 104 TLLTAVTNQRAFEAIPSLLAGMDAAGLRPDAIFFNALINSFVEAGRMGEATSTFWKMSRH 163

Query: 172 --GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE----------GNVKPNLRTYNVL 219
             G  PT ST+NTLIKG+GIAG+P+ES ++ D+M+              V+PNL TYN+L
Sbjct: 164 HPGCRPTISTFNTLIKGFGIAGRPDESQRIFDMMAGGDGDGDRDRVASTVRPNLTTYNIL 223

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           V+AWC+ + + EAW V+ +M A G++PDVVTYNT+A+AYA+N E  +AEE++VEM    +
Sbjct: 224 VKAWCDHRRLEEAWGVVGRMRARGVEPDVVTYNTVASAYAKNDETWRAEELVVEMVRARL 283

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           + + RT GII+ GYC+EG+++EALR  R MK+ GV PN+++FN L+KGF++  D    D+
Sbjct: 284 RTSERTWGIIVGGYCREGRLEEALRCVRQMKDAGVLPNVIVFNTLLKGFLDANDTAAADD 343

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           VL LM+ F + PD++TYS  +NA+S+ G M KC ++FD M +AGI+PD   YSILAKG+V
Sbjct: 344 VLGLMEHFGIKPDIVTYSHQLNAFSSLGHMAKCSKVFDKMVEAGIEPDPQVYSILAKGHV 403

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           R Q+P KAEELL  M   G  PNVV FTT+ISGWCS   MD A  V+ KM + GV PNL+
Sbjct: 404 RAQQPGKAEELLERMCRLGVRPNVVTFTTVISGWCSVADMDNATRVYRKMRDAGVRPNLR 463

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           TFETL+WGYSE +QPW+AEE+LQ+M+  G+ P++ST+ L+A+A +A GL K A R +   
Sbjct: 464 TFETLIWGYSEQKQPWKAEEVLQMMQEAGIRPKQSTYSLVADAWKAVGLVKNANRTVGSP 523

Query: 520 KNKERTNEMEAEE--DIPVESLERLY-----HKEATT--ASYPNLLQIPNVVSSDQKGSA 570
            ++ R N  + +E    P +  ++L      +++AT+  +S+ + +Q+ + + + + G  
Sbjct: 524 DDRRRPNANDHDEPDSRPHDDDDKLQRSRRGNEQATSDPSSHVSFVQVTSALGTCRAG-- 581

Query: 571 AALKKGRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPLGQVGMYSQLANS 630
                            E +  A +S  L  SC+   R    C+ Q   Q G+YS    S
Sbjct: 582 -----------------EFASSAPSSSSLWRSCQLRLRSSGFCRNQRQNQGGLYSHSIGS 624

Query: 631 CTVVFLN 637
             +VFL+
Sbjct: 625 IKMVFLS 631


>gi|115435438|ref|NP_001042477.1| Os01g0228400 [Oryza sativa Japonica Group]
 gi|17385740|dbj|BAB78680.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|113532008|dbj|BAF04391.1| Os01g0228400 [Oryza sativa Japonica Group]
 gi|215740499|dbj|BAG97155.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 636

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 282/638 (44%), Positives = 404/638 (63%), Gaps = 50/638 (7%)

Query: 15  DKYQSGSTIVKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRS 74
           +K+++GS       G + P+     G+ KQ    S P   + +  C+ C    +C+ V +
Sbjct: 34  EKHEAGSN------GALHPSN----GQAKQ--PPSPPQKQKQKLLCTTCGKGHTCQAVIA 81

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
            T+ M ++I+  +P +A + F +L++ GH+PSLVTYTTLLAALT Q+ F++I  ++++VE
Sbjct: 82  RTRQMRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQRAFDTIPWLLAEVE 141

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           + G+ PDSIFFNA+INA  E+  M EA +TF +M  SG  PT ST+NTLIKGYGIAG+PE
Sbjct: 142 DAGLRPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPE 201

Query: 195 ESVKLLDLMSREGN-----VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           ES ++ D+M+  G      V+PNL TYN+LV+AWC+   + EAW V+ +M ASG  PDVV
Sbjct: 202 ESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVV 261

Query: 250 TYNTIATAYAQNGEADQAEEVIVEM-EHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           TYNT+A+AYA+N E  +AEE++VEM +  G++ + RT GII+ GYC+EG++ EALR  R 
Sbjct: 262 TYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQ 321

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           MK+ GV PN+++FN L+KGF++  D   VD+VL LM++F + PD++TYS  +NA S+ G 
Sbjct: 322 MKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGH 381

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           M KC ++FD M +AGI+PD   YSILAKGYVR Q+PEKAEELL  M   G  PNVV FTT
Sbjct: 382 MAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTT 441

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +ISGWCS   M  A+ V+  M + GV PNL+TFETL+WGYSE +QPW+AEE+LQ+M+  G
Sbjct: 442 VISGWCSVADMGNAVRVYAAMRDAGVRPNLRTFETLIWGYSELKQPWKAEEVLQMMQDAG 501

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEM---------EAEEDIPVESL 539
           V P+++T+ L+A+A +A GL + A R L    +     +          +   D  ++S 
Sbjct: 502 VRPKQTTYCLVADAWKAVGLVENANRALGSSSSSGDLLDADDDEEPYFPDNHGDDKLQSF 561

Query: 540 ERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYL 599
           ER      + AS                  +  + +  M L+ A SS      + +   L
Sbjct: 562 ERTNGHAKSDAS-----------------RSMQVTRASMSLKTARSS------SPSLSLL 598

Query: 600 SHSCKSGARLPIICQKQPLGQVGMYSQLANSCTVVFLN 637
             SC+   R   +C+KQ   Q G+Y Q  +S  +VFL+
Sbjct: 599 RRSCRLPVRSTWLCRKQLQMQCGVYGQSISSLKMVFLS 636


>gi|357127701|ref|XP_003565517.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g25630-like [Brachypodium distachyon]
          Length = 579

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 269/590 (45%), Positives = 375/590 (63%), Gaps = 36/590 (6%)

Query: 60  CSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           C+ C    +C+ V S T+ M +LI+  KP +A A+F  L   GH+PSLVTYTTLL+ LT 
Sbjct: 14  CATCAKGHACQAVVSRTREMRALIDEKKPHQAHAVFAQLAGEGHRPSLVTYTTLLSLLTS 73

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE--SGLTPTT 177
           Q+ F  I ++++ +E  G+ PD IFFNA+INAF E+G M EA   FWKM     G  PT 
Sbjct: 74  QRAFERIPALLADIEAAGLRPDPIFFNALINAFVEAGRMGEATSVFWKMSRHHPGCRPTV 133

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
           ST+NTLIKG+GIAG+PEES ++ DLM+    V+PNL TYN+LV+AWC+++ + +AW V+ 
Sbjct: 134 STFNTLIKGFGIAGRPEESQRIFDLMT--AWVRPNLTTYNILVKAWCDQRRMEQAWAVVG 191

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEE-VIVEMEHNGVQPNGRTCGIIISGYCKE 296
           +M  + ++PDVVTYNT+A+AYA+N E  +AEE V+VEM    ++ + RT GII+ GYC+E
Sbjct: 192 RMRPAAVEPDVVTYNTLASAYAKNDETWRAEELVVVEMARARLRTSERTWGIIVGGYCRE 251

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
           G+++EALR  R MK+ GV PN+++FN L+KGF++  D     +VL LM++F + PD++TY
Sbjct: 252 GRLEEALRCVRQMKDAGVGPNVIVFNTLLKGFLDANDAAAAADVLGLMEQFGIKPDIVTY 311

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           S  +NA S+ G M +C ++FD M +AGI+PD   YSILAKGYVR Q+P KAEELL  M  
Sbjct: 312 SHQLNALSSLGHMARCAKVFDRMLEAGIEPDPQVYSILAKGYVRAQQPGKAEELLQQMGR 371

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G  PNVV FTT+ISGWCS   MD A  V+DKM   GV PNL+TFETL+WGYSE +QPW+
Sbjct: 372 LGVRPNVVTFTTVISGWCSVADMDNATRVYDKMRGAGVRPNLRTFETLIWGYSEQKQPWK 431

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE---- 532
           AE++LQ+MK  GV P++ST+ L+A+A +A G+ + A R L    +  R N  + +E    
Sbjct: 432 AEKVLQMMKDAGVRPKQSTYSLVADAWKAVGIVENANRALGSPDDCRRRNVSDHDEPGRH 491

Query: 533 -DIPVESLERLYHKEATTASYP---NLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLE 588
            D  ++ L+R    +    S P   + LQ+ + + + + G +A+       L        
Sbjct: 492 SDDEIDRLQRFGRTDEQAKSDPSNSSFLQVTSALGTGKTGKSASPPASFWRL-------- 543

Query: 589 CSWFATTSMYLSHSCKSGARLPIICQKQPLGQVGMYSQLANSC-TVVFLN 637
                         C+   R P  C+ Q   Q   Y Q   S   VVFLN
Sbjct: 544 --------------CQLRMRSPGFCRNQWQKQCVFYGQNIPSLKAVVFLN 579


>gi|222618027|gb|EEE54159.1| hypothetical protein OsJ_00969 [Oryza sativa Japonica Group]
          Length = 610

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 271/638 (42%), Positives = 389/638 (60%), Gaps = 76/638 (11%)

Query: 15  DKYQSGSTIVKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRS 74
           +K+++GS       G + P+     G+ KQ    S P   + +  C+ C    +C+ V +
Sbjct: 34  EKHEAGSN------GALHPSN----GQAKQ--PPSPPQKQKQKLLCTTCGKGHTCQAVIA 81

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
            T+ M ++I+  +P +A + F +L++ GH+PSLVTYTTLLAALT Q+ F++I  ++++VE
Sbjct: 82  RTRQMRAMIDARRPHQAHSAFRHLVDDGHRPSLVTYTTLLAALTSQRAFDTIPWLLAEVE 141

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           + G+ PDSIFFNA+INA  E+  M EA +TF +M  SG  PT ST+NTLIKGYGIAG+PE
Sbjct: 142 DAGLRPDSIFFNALINALVEARRMGEATNTFLRMGHSGCRPTASTFNTLIKGYGIAGRPE 201

Query: 195 ESVKLLDLMSREGN-----VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           ES ++ D+M+  G      V+PNL TYN+LV+AWC+   + EAW V+ +M ASG  PDVV
Sbjct: 202 ESQRVFDMMASGGAGGEAAVRPNLTTYNILVKAWCDAGRLEEAWRVVARMRASGADPDVV 261

Query: 250 TYNTIATAYAQNGEADQAEEVIVEM-EHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           TYNT+A+AYA+N E  +AEE++VEM +  G++ + RT GII+ GYC+EG++ EALR  R 
Sbjct: 262 TYNTLASAYAKNDETWRAEELVVEMAQQAGLRTSERTWGIIVGGYCREGRLGEALRCVRQ 321

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           MK+ GV PN+++FN L+KGF++  D   VD+VL LM++F + PD++TYS  +NA S+ G 
Sbjct: 322 MKDSGVLPNVIVFNTLLKGFLDANDMAAVDDVLGLMEQFGIKPDIVTYSHQLNALSSMGH 381

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           M KC ++FD M +AGI+PD   YSILAKGYVR Q+PEKAEELL  M   G  PNVV FTT
Sbjct: 382 MAKCMKVFDKMIEAGIEPDPQVYSILAKGYVRAQQPEKAEELLRQMGRLGVRPNVVTFTT 441

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +ISGW                          TFETL+WGYSE +QPW+AEE+LQ+M+  G
Sbjct: 442 VISGW--------------------------TFETLIWGYSELKQPWKAEEVLQMMQDAG 475

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEM---------EAEEDIPVESL 539
           V P+++T+ L+A+A +A GL + A R L    +     +          +   D  ++S 
Sbjct: 476 VRPKQTTYCLVADAWKAVGLVENANRALGSSSSSGDLLDADDDEEPYFPDNHGDDKLQSF 535

Query: 540 ERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYL 599
           ER      + AS                  +  + +  M L+ A SS      + +   L
Sbjct: 536 ERTNGHAKSDAS-----------------RSMQVTRASMSLKTARSS------SPSLSLL 572

Query: 600 SHSCKSGARLPIICQKQPLGQVGMYSQLANSCTVVFLN 637
             SC+   R   +C+KQ   Q G+Y Q  +S  +VFL+
Sbjct: 573 RRSCRLPVRSTWLCRKQLQMQCGVYGQSISSLKMVFLS 610


>gi|168063537|ref|XP_001783727.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162664733|gb|EDQ51441.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 445

 Score =  396 bits (1018), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 194/440 (44%), Positives = 283/440 (64%)

Query: 83  IERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS 142
           + RG  ++ ++   NL   GH+P+  TYT LL++L    R      ++ Q+EE+ + PD+
Sbjct: 1   MSRGDHRQVRSTLKNLRRDGHRPAKETYTLLLSSLISDGRLGEGPLLLQQMEEDNVIPDA 60

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           IFFN ++N + E+G M+EA     +MKE G    TS+YNTLIKGYG+ G+PEE++KLL  
Sbjct: 61  IFFNTLLNGYCEAGKMKEAEALVLEMKERGCPLITSSYNTLIKGYGLDGQPEEAMKLLQE 120

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           M+++ N KPN RT+N+L++AW ++KN  +A NV+  M A+G+ PDVV+YNT+A  +A+ G
Sbjct: 121 MAKDVNSKPNDRTFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKLG 180

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
           +   AE VI EM++  ++PN RT GI+I+GY   G+I E+LR    MK  G+ P + +FN
Sbjct: 181 KPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFN 240

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            L+KG+ E M    VD+V  LM+ F V PDV T+  IMNAW + G +D+ K +   M + 
Sbjct: 241 HLVKGYSESMKPHKVDKVFKLMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEY 300

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
            ++PD  AYSIL KGY R+  PE+ E  L  MI+    PNV+ +TT+ISG+CS   MD A
Sbjct: 301 DLQPDVMAYSILVKGYSRQGRPEEGEAFLNIMIDENLKPNVITYTTVISGYCSLAQMDDA 360

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           + VF +M    V PN++TF TL+WG+ EAR P RAEEIL+ ++  G  P      L+A+ 
Sbjct: 361 MRVFQEMRSRSVFPNMQTFRTLIWGFKEARWPRRAEEILEYIRKAGFTPDLECIELVADC 420

Query: 503 RRATGLTKEAKRILSKIKNK 522
            R+ G   EA R+L+   +K
Sbjct: 421 WRSIGADGEADRVLAGTNSK 440



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 112/232 (48%), Gaps = 1/232 (0%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+   ++N  I  G+  E+  +   +   G  P++  +  L+   +   + + +  +   
Sbjct: 202 RTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVFNHLVKGYSESMKPHKVDKVFKL 261

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +E  G+ PD   F  ++NA+  +G ++EA     +MKE  L P    Y+ L+KGY   G+
Sbjct: 262 MENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVLLRMKEYDLQPDVMAYSILVKGYSRQGR 321

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
           PEE    L++M  E N+KPN+ TY  ++  +C+   + +A  V  +M +  + P++ T+ 
Sbjct: 322 PEEGEAFLNIMIDE-NLKPNVITYTTVISGYCSLAQMDDAMRVFQEMRSRSVFPNMQTFR 380

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           T+   + +     +AEE++  +   G  P+     ++   +   G   EA R
Sbjct: 381 TLIWGFKEARWPRRAEEILEYIRKAGFTPDLECIELVADCWRSIGADGEADR 432



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 135/317 (42%), Gaps = 29/317 (9%)

Query: 48  NSKPTDSQPQTHCSFCM---------NKESCRTVRSMTK-------------LMNSLIER 85
           NSKP D       +F M         N E  R V SM +             L     + 
Sbjct: 126 NSKPNDR------TFNMLIKAWAHDKNPEKARNVISMMRAAGVGPDVVSYNTLAQLFAKL 179

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GKP +A+ +   +     +P+  TY  ++       + +    ++ +++ +G+ P    F
Sbjct: 180 GKPWDAENVITEMQNVYLRPNERTYGIVINGYIAAGQIDESLRLIERMKMDGISPTIAVF 239

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++  +SES    +    F  M+  G+ P   T+  ++  +   G  +E+  +L L  +
Sbjct: 240 NHLVKGYSESMKPHKVDKVFKLMENFGVKPDVQTFGLIMNAWCSTGLIDEAKAVL-LRMK 298

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           E +++P++  Y++LV+ +  +    E    ++ M    +KP+V+TY T+ + Y    + D
Sbjct: 299 EYDLQPDVMAYSILVKGYSRQGRPEEGEAFLNIMIDENLKPNVITYTTVISGYCSLAQMD 358

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A  V  EM    V PN +T   +I G+ +    + A      +++ G  P+L    L+ 
Sbjct: 359 DAMRVFQEMRSRSVFPNMQTFRTLIWGFKEARWPRRAEEILEYIRKAGFTPDLECIELVA 418

Query: 326 KGFVEIMDRDGVDEVLA 342
             +  I      D VLA
Sbjct: 419 DCWRSIGADGEADRVLA 435


>gi|302766812|ref|XP_002966826.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
 gi|300164817|gb|EFJ31425.1| hypothetical protein SELMODRAFT_11024 [Selaginella moellendorffii]
          Length = 484

 Score =  372 bits (955), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 202/481 (41%), Positives = 286/481 (59%), Gaps = 16/481 (3%)

Query: 59  HCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEG--GHKPSLVTYTTLLAA 116
            C  C   + C  VR  TKLM      G  Q+   +         GH+PS+  YT  +A 
Sbjct: 1   QCKDCFGGKECSAVRQATKLMKIYYANGGKQQKAKVKKKAAGAMQGHRPSVECYTVAIAE 60

Query: 117 LTIQKRFNSIHSIMSQVEE-NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTP 175
           +  +K+ +    ++ Q+EE +G+ PDS+ FN VIN +   G MEEAM    +M++    P
Sbjct: 61  VVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAMRVVQEMRQKNCRP 120

Query: 176 TTSTYNTLIKGYGIAGKPEESVKL-LDLMSREGN-----------VKPNLRTYNVLVRAW 223
           TTSTYNTLIKGYG+AG+ E++ +L L L+++  N            +PNLRT N L+ AW
Sbjct: 121 TTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLRTMNTLLNAW 180

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C E  + EAW V+  + ++GM+PD VTYNT+A AYA  G   + E++I +M++  ++PN 
Sbjct: 181 CREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIADMKNARLKPNL 240

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD-GVDEVLA 342
           RT  I+IS YC+ G  +  L+    +K  G+HP++V FN L+KG+ +  D+   ++ VL 
Sbjct: 241 RTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLKGYSQENDQQLKLEMVLD 300

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
           LM    V PDV TYSTIMN WS+AG  DK + I  +M +  +KPD  A++ILAKGYVR  
Sbjct: 301 LMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDRVKPDVRAFAILAKGYVRSG 360

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
              +AE LL  M   G  PNVV++TTIISGWCS G MD A+ V + M E G +PNL T +
Sbjct: 361 RTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDALRVLELMLERGEAPNLNTVQ 420

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           TL+WG+ EARQP  AEE++  M A G+        ++A A  A G   E  RIL+  + +
Sbjct: 421 TLVWGFCEARQPREAEEMVAAMAAAGLPVDSKCLDMIASAWSALGFPFETDRILASDRRR 480

Query: 523 E 523
           +
Sbjct: 481 Q 481



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 1/188 (0%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           + + +   G +P + TY+T++   +     +   +I+ +++++ + PD   F  +   + 
Sbjct: 298 VLDLMAANGVRPDVTTYSTIMNWWSSAGMADKAQTILLEMQQDRVKPDVRAFAILAKGYV 357

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
            SG   EA      M   G+ P    Y T+I G+   G+ ++++++L+LM   G   PNL
Sbjct: 358 RSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDALRVLELMLERGEA-PNL 416

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            T   LV  +C  +   EA  ++  MAA+G+  D    + IA+A++  G   + + ++  
Sbjct: 417 NTVQTLVWGFCEARQPREAEEMVAAMAAAGLPVDSKCLDMIASAWSALGFPFETDRILAS 476

Query: 274 MEHNGVQP 281
                + P
Sbjct: 477 DRRRQLSP 484



 Score = 42.0 bits (97), Expect = 0.97,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 1/110 (0%)

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH-GVSPNLKTFETLMWGYSEARQPWR 476
           G  P+V  +T  I+   ++  M  A ++  +M E  G++P+   F T++ G+    Q   
Sbjct: 46  GHRPSVECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEE 105

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTN 526
           A  ++Q M+     P  ST+  L +     G  ++A++++  + NK R +
Sbjct: 106 AMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNS 155


>gi|302755512|ref|XP_002961180.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
 gi|300172119|gb|EFJ38719.1| hypothetical protein SELMODRAFT_21211 [Selaginella moellendorffii]
          Length = 497

 Score =  368 bits (944), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 203/494 (41%), Positives = 286/494 (57%), Gaps = 29/494 (5%)

Query: 59  HCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEG--GHKPSLVTYTTLLAA 116
            C  C   + C  VR  TKLM      G  Q+   +         GH+PS+  YT  +A 
Sbjct: 1   QCKDCFGGKECSAVRQATKLMKIYYANGGKQQKAKVKKKAAGAMQGHRPSVECYTVAIAE 60

Query: 117 LTIQKRFNSIHSIMSQVEE-NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTP 175
           +  +K+ +    ++ Q+EE +G+ PDS+ FN VIN +   G MEEAM    +M++    P
Sbjct: 61  VVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEEAMRVVQEMRQKNCRP 120

Query: 176 TTSTYNTLIKGYGIAGKPEESVKL-LDLMSREGN-----------VKPNLRTYNVLVRAW 223
           TTSTYNTLIKGYG+AG+ E++ +L L L+++  N            +PNLRT N L+ AW
Sbjct: 121 TTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNSPSSEDGLEPVARPNLRTMNTLLNAW 180

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C E  + EAW V+  + ++GM+PD VTYNT+A AYA  G   + E++I +M++  ++PN 
Sbjct: 181 CREGRLEEAWRVVAMIKSAGMQPDAVTYNTLAKAYAAAGRVAELEDLIADMKNARLKPNL 240

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM----------- 332
           RT  I+IS YC+ G  +  L+    +K  G+HP++V FN L+KG+VE             
Sbjct: 241 RTYAILISCYCQNGMPERGLQLLSRLKFEGLHPDVVAFNTLLKGYVEQQSSQQQQDFQSQ 300

Query: 333 ---DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
               +  ++ VL LM    V PDV TYSTIMN WS+AG  DK + I  +M +  +KPD  
Sbjct: 301 ENDQQLKLEMVLDLMAANGVRPDVTTYSTIMNWWSSAGVADKAQTILLEMQQDRVKPDVR 360

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           A++ILAKGYVR     +AE LL  M   G  PNVV++TTIISGWCS G MD A+ V + M
Sbjct: 361 AFAILAKGYVRSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDALRVLELM 420

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
            E G +PNL T +TL+WG+ EARQP  AEE++  M A G+        ++A A  A G  
Sbjct: 421 LERGEAPNLNTVQTLVWGFCEARQPREAEEMVAAMAAAGLPVDSKCLDMIASAWSALGFP 480

Query: 510 KEAKRILSKIKNKE 523
            E  RIL+  + ++
Sbjct: 481 FETDRILASDRRRQ 494



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/188 (23%), Positives = 90/188 (47%), Gaps = 1/188 (0%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           + + +   G +P + TY+T++   +     +   +I+ +++++ + PD   F  +   + 
Sbjct: 311 VLDLMAANGVRPDVTTYSTIMNWWSSAGVADKAQTILLEMQQDRVKPDVRAFAILAKGYV 370

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
            SG   EA      M   G+ P    Y T+I G+   G+ ++++++L+LM   G   PNL
Sbjct: 371 RSGRTHEAESLLQDMSLHGVAPNVVVYTTIISGWCSMGRMDDALRVLELMLERGEA-PNL 429

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            T   LV  +C  +   EA  ++  MAA+G+  D    + IA+A++  G   + + ++  
Sbjct: 430 NTVQTLVWGFCEARQPREAEEMVAAMAAAGLPVDSKCLDMIASAWSALGFPFETDRILAS 489

Query: 274 MEHNGVQP 281
                + P
Sbjct: 490 DRRRQLSP 497



 Score = 42.0 bits (97), Expect = 0.99,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 54/110 (49%), Gaps = 1/110 (0%)

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH-GVSPNLKTFETLMWGYSEARQPWR 476
           G  P+V  +T  I+   ++  M  A ++  +M E  G++P+   F T++ G+    Q   
Sbjct: 46  GHRPSVECYTVAIAEVVAEKKMSEAQQLLKQMEEEDGLAPDSVCFNTVINGWCNEGQMEE 105

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTN 526
           A  ++Q M+     P  ST+  L +     G  ++A++++  + NK R +
Sbjct: 106 AMRVVQEMRQKNCRPTTSTYNTLIKGYGVAGQAEQAQQLVLHLLNKTRNS 155


>gi|388500892|gb|AFK38512.1| unknown [Medicago truncatula]
          Length = 249

 Score =  333 bits (853), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 154/238 (64%), Positives = 191/238 (80%), Gaps = 2/238 (0%)

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +KLL++  ++GNVKPN RTYN+L++AWC +  + EAWNVMHKM  SGM+PD+VTYNT+A 
Sbjct: 1   MKLLEMTIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLAR 60

Query: 257 AYAQNGEADQAEEVIVEME--HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
           A+AQNGE D AE +I++M+  +N V+PN RTCGIII GYCKEG + EALRF   MKE GV
Sbjct: 61  AFAQNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGV 120

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
           HPN V+FN LIKG+++I D DGV+E L LM+EF + PDV+TYSTIMNAWS++G MD C+E
Sbjct: 121 HPNPVVFNSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEE 180

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           IFDDM KA I+PD  AYSILAKGYVR  +P+KAE LL +M + G   NVVIFTTIISG
Sbjct: 181 IFDDMVKAEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISG 238



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 116/225 (51%), Gaps = 2/225 (0%)

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           ++   V+PN RT  I+I  +C + +++EA      M   G+ P++V +N L + F +  +
Sbjct: 8   IQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGE 67

Query: 334 RDGVDEVLALMKEF--RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
            D  + ++  M+++  +V P+  T   I+  +   G M +       M + G+ P+   +
Sbjct: 68  TDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVF 127

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + L KGY+   + +  EE L  M E G  P+VV ++TI++ W S G MD   E+FD M +
Sbjct: 128 NSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVK 187

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             + P+++ +  L  GY  A QP +AE +L  M  +G+      F
Sbjct: 188 AEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIF 232



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 63/231 (27%), Positives = 122/231 (52%), Gaps = 1/231 (0%)

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +++  + P+   +N +I A+     +EEA +   KM  SG+ P   TYNTL + +   G+
Sbjct: 8   IQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGE 67

Query: 193 PEESVKLLDLMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
            + + +L+  M +  N VKPN RT  +++R +C E N+TEA   ++KM   G+ P+ V +
Sbjct: 68  TDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVF 127

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++   Y    + D  EE +  ME  G++P+  T   I++ +   G +         M +
Sbjct: 128 NSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVK 187

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
             + P++  +++L KG+V     D  + +L  M ++ +  +V+ ++TI++ 
Sbjct: 188 AEIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISG 238



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/232 (28%), Positives = 119/232 (51%), Gaps = 3/232 (1%)

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNME 159
           +G  KP+  TY  L+ A   +       ++M ++  +GM PD + +N +  AF+++G  +
Sbjct: 10  DGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETD 69

Query: 160 EAMDTFWKMKE--SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
            A     KM++  + + P   T   +I+GY   G   E+++ L  M   G V PN   +N
Sbjct: 70  NAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELG-VHPNPVVFN 128

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            L++ + +  +       +  M   G+KPDVVTY+TI  A++ +G  D  EE+  +M   
Sbjct: 129 SLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKA 188

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
            ++P+ +   I+  GY + G+  +A     +M +YG+  N+VIF  +I G V
Sbjct: 189 EIEPDIQAYSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISGVV 240



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/222 (27%), Positives = 113/222 (50%), Gaps = 3/222 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+   L+ +   + + +EA  + + ++  G +P +VTY TL  A       ++   ++ +
Sbjct: 18  RTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGETDNAERLILK 77

Query: 133 VEE--NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++  N + P+      +I  + + GNM EA+   +KMKE G+ P    +N+LIKGY   
Sbjct: 78  MQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVFNSLIKGYLDI 137

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              +   + L LM   G +KP++ TY+ ++ AW +   +     +   M  + ++PD+  
Sbjct: 138 TDTDGVEEALTLMEEFG-IKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVKAEIEPDIQA 196

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
           Y+ +A  Y + G+ D+AE ++  M   G+Q N      IISG
Sbjct: 197 YSILAKGYVRAGQPDKAEALLNSMTKYGLQANVVIFTTIISG 238



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/189 (28%), Positives = 95/189 (50%), Gaps = 2/189 (1%)

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           +++  V P+  TY+ ++ AW T   +++   +   M  +G++PD   Y+ LA+ + +  E
Sbjct: 8   IQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFAQNGE 67

Query: 404 PEKAEELLMTMIE--SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            + AE L++ M +  +   PN      II G+C +G+M  A+    KM E GV PN   F
Sbjct: 68  TDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMKELGVHPNPVVF 127

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            +L+ GY +       EE L +M+ FG+ P   T+  +  A  ++GL    + I   +  
Sbjct: 128 NSLIKGYLDITDTDGVEEALTLMEEFGIKPDVVTYSTIMNAWSSSGLMDNCEEIFDDMVK 187

Query: 522 KERTNEMEA 530
            E   +++A
Sbjct: 188 AEIEPDIQA 196



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 2/113 (1%)

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L MT+ +    PN   +  +I  WC+   ++ A  V  KM   G+ P++ T+ TL   ++
Sbjct: 4   LEMTIQDGNVKPNERTYNILIQAWCTKNELEEAWNVMHKMVNSGMQPDIVTYNTLARAFA 63

Query: 470 EARQPWRAEEILQIMKAFG--VHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  +   AE ++  M+ +   V P + T  ++       G   EA R L K+K
Sbjct: 64  QNGETDNAERLILKMQQYNNKVKPNERTCGIIIRGYCKEGNMTEALRFLYKMK 116


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 142/483 (29%), Positives = 227/483 (46%), Gaps = 36/483 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + GK  +A+ +F  L+  G  PS V YT+L+  L +   F+    + + +   G
Sbjct: 16  LIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 75

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P  + +N +I+A  + G +EEA D   KM E G  P   TYNT++ G   +G+ EE++
Sbjct: 76  CPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEAL 135

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA---------------- 241
            L + M R G   PN R++N ++   C +  I +A  V H+M A                
Sbjct: 136 LLFNEMERLG-CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDG 194

Query: 242 -------------------SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
                              SG+ P  VTYN +          D+A E+   M   G +P+
Sbjct: 195 LAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T  I+I  +CK GK+ EA R  + M + G  P++V ++ LI G   I   D    +L 
Sbjct: 255 RFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M + +  P V+T +T+++    AG + + +E+ D M  +G  PD   Y+ L  G+ R  
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           + E+A ELL  M+  G  PNVV +T ++SG C    +  A  VF +M   G +PNL T+ 
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            L+ G+  A Q     ++   M   G+ P    +  LA     +G +  A  IL + +  
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494

Query: 523 ERT 525
            R+
Sbjct: 495 LRS 497



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 198/385 (51%), Gaps = 1/385 (0%)

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           E  + PDS  +  +I+  +++G + +A D F K+  SG+TP+T  Y +LI G  +A   +
Sbjct: 3   ERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFD 62

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++ +L   M+R G   P+  TYNV++ A C    + EA +++ KM   G  PDVVTYNT+
Sbjct: 63  DARELFADMNRRG-CPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTV 121

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                ++G  ++A  +  EME  G  PN R+   II G C++ KI +A +    M+   +
Sbjct: 122 MDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDI 181

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P+   + +LI G  +    +   ++   M +  + P  +TY+ +++    A  +D+  E
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +F  M   G +P    ++IL   + +  + ++A  LL  M + G  P+VV ++T+ISG C
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 301

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
           S   +D A  + + M +    P + T  TL+ G  +A +   A E+L  M + G  P   
Sbjct: 302 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361

Query: 495 TFLLLAEARRATGLTKEAKRILSKI 519
           T+  L       G T+ A+ +LS +
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDM 386



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 122/420 (29%), Positives = 198/420 (47%), Gaps = 7/420 (1%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P   +Y  L+  L    + N    +  ++  +G+ P ++ + ++I+    + + ++A + 
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F  M   G  P+  TYN +I      G  EE+  L+  M  +G+V P++ TYN ++   C
Sbjct: 68  FADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYNTVMDGLC 126

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
               + EA  + ++M   G  P+  ++NTI     Q  + DQA +V  EME   + P+  
Sbjct: 127 KSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSW 186

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           + GI+I G  K GK+ EA +  R M + G+ P+ V +N++I G         +DE L L 
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYT---LDEALELF 243

Query: 345 KEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
           K  R     P   T++ +++A    G MD+   +   M   G  PD   YS L  G    
Sbjct: 244 KSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 303

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
              + A  LL  M++    P VV   T+I G C  G +  A EV D M   G SP++ T+
Sbjct: 304 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            TL+ G+  A Q  RA E+L  M A G+ P   T+  L           EA  + +++K+
Sbjct: 364 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 423



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 195/414 (47%), Gaps = 7/414 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           RS   ++  L ++ K  +A  +F+ +      P   +Y  L+  L    + N  + +  +
Sbjct: 151 RSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRR 210

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + ++G+ P ++ +N VI+    +  ++EA++ F  M+  G  P+  T+N LI  +   GK
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK 270

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +E+ +LL  M+ +G+V P++ TY+ L+   C+   + +A +++  M     KP VVT N
Sbjct: 271 MDEAFRLLKRMTDDGHV-PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+     + G   +A EV+  M  +G  P+  T   ++ G+C+ G+ + A      M   
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ PN+V +  L+ G  +         V A MK     P++ TY+ ++  + +AG +D  
Sbjct: 390 GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGG 449

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES----GFHPNVVIFTT 428
            ++F +M  AGI PD   Y  LA    +     +A E+L    ES     +   V  F  
Sbjct: 450 LKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFA- 508

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            + G    G M+ A+     M   G  P  +   +L+ G  ++ Q   A  +L+
Sbjct: 509 -VDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLE 561



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 115/274 (41%), Gaps = 15/274 (5%)

Query: 57  QTHCSFCMNKESCRTVRSMTK------------LMNSLIERGKPQEAQAIFNNLIEGGHK 104
             HC      E+ R ++ MT             L++ L    +  +A+ +  ++++   K
Sbjct: 263 DAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCK 322

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P++VT  TL+  L    R      ++  +  +G  PD + +N +++    +G  E A + 
Sbjct: 323 PTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERAREL 382

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
              M   GL P   TY  L+ G   A +  E+  +   M   G   PNL TY  L+  +C
Sbjct: 383 LSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG-CAPNLFTYTALILGFC 441

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP--N 282
           +   +     +  +M  +G+ PD V Y T+A    ++G + +A E++ E   +       
Sbjct: 442 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWG 501

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
                  + G    GK++ AL F R M   G  P
Sbjct: 502 DEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLP 535



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 116/283 (40%), Gaps = 35/283 (12%)

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M    V P+  + GI+I G  K GK+ +A    + +   GV P+ V +  LI G      
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            D   E+ A M      P  +TY+ I++A    G +++  ++   M + G  PD   Y+ 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD------ 447
           +  G  +    E+A  L   M   G  PN     TII G C    +D+A +VF       
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 448 -----------------------------KMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
                                        +M + G++P+  T+  ++ G   A     A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           E+ + M++ G  P + TF +L +A    G   EA R+L ++ +
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTD 283



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 108/243 (44%), Gaps = 6/243 (2%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C+ TV +   L++ L + G+ +EA+ + + ++  G  P +VTY TL+       +
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 ++S +   G+ P+ + + A+++   ++  + EA   F +MK SG  P   TY  
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 435

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+  AG+ +  +KL   M   G + P+   Y  L    C       A  ++ +   S
Sbjct: 436 LILGFCSAGQVDGGLKLFGEMVCAG-ISPDHVVYGTLAAELCKSGRSARALEILREGRES 494

Query: 243 GMKPDV---VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
            ++ +      Y          G+ + A   + +M   G  P    C  +++G CK G+ 
Sbjct: 495 -LRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQG 553

Query: 300 KEA 302
            EA
Sbjct: 554 GEA 556


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  242 bits (617), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 226/483 (46%), Gaps = 36/483 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + GK  +A+ +F  L+  G  PS V YT+L+  L +   F+    + + +   G
Sbjct: 16  LIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRG 75

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P  + +N +I+A  + G +EEA D   KM E G  P   TYNT++ G   + + EE++
Sbjct: 76  CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEAL 135

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA---------------- 241
            L + M R G   PN R++N ++   C +  I +A  V H+M A                
Sbjct: 136 LLFNEMERLG-CTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDG 194

Query: 242 -------------------SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
                              SG+ P  VTYN +          D+A E+   M   G +P+
Sbjct: 195 LAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPS 254

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T  I+I  +CK GK+ EA R  + M + G  P++V ++ LI G   I   D    +L 
Sbjct: 255 RFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLE 314

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M + +  P V+T +T+++    AG + + +E+ D M  +G  PD   Y+ L  G+ R  
Sbjct: 315 DMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAG 374

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           + E+A ELL  M+  G  PNVV +T ++SG C    +  A  VF +M   G +PNL T+ 
Sbjct: 375 QTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYT 434

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            L+ G+  A Q     ++   M   G+ P    +  LA     +G +  A  IL + +  
Sbjct: 435 ALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRES 494

Query: 523 ERT 525
            R+
Sbjct: 495 LRS 497



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 197/385 (51%), Gaps = 1/385 (0%)

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           E  + PDS  +  +I+  +++G + +A + F K+  SG+TP+T  Y +LI G  +A   +
Sbjct: 3   ERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFD 62

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++ +L   M+R G   P+  TYNV++ A C    + EA +++ KM   G  PDVVTYNT+
Sbjct: 63  DARELFADMNRRG-CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTV 121

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                ++   ++A  +  EME  G  PN R+   II G C++ KI +A +    M+   +
Sbjct: 122 MDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDI 181

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P+   + +LI G  +    +   ++   M +  + P  +TY+ +++    A  +D+  E
Sbjct: 182 PPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALE 241

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +F  M   G +P    ++IL   + +  + ++A  LL  M + G  P+VV ++T+ISG C
Sbjct: 242 LFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLC 301

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
           S   +D A  + + M +    P + T  TL+ G  +A +   A E+L  M + G  P   
Sbjct: 302 SIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVV 361

Query: 495 TFLLLAEARRATGLTKEAKRILSKI 519
           T+  L       G T+ A+ +LS +
Sbjct: 362 TYNTLVHGHCRAGQTERARELLSDM 386



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 199/420 (47%), Gaps = 7/420 (1%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P   +Y  L+  L    + N   ++  ++  +G+ P ++ + ++I+    + + ++A + 
Sbjct: 8   PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAREL 67

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F  M   G  P+  TYN +I      G  EE+  L+  M  +G+V P++ TYN ++   C
Sbjct: 68  FADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHV-PDVVTYNTVMDGLC 126

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
               + EA  + ++M   G  P+  ++NTI     Q  + DQA +V  EME   + P+  
Sbjct: 127 KSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSW 186

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           + GI+I G  K GK+ EA +  + M + G+ P+ V +N++I G         +DE L L 
Sbjct: 187 SYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYT---LDEALELF 243

Query: 345 KEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
           K  R     P   T++ +++A    G +D+   +   M   G  PD   YS L  G    
Sbjct: 244 KSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSI 303

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
              + A  LL  M++    P VV   T+I G C  G +  A EV D M   G SP++ T+
Sbjct: 304 ARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTY 363

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            TL+ G+  A Q  RA E+L  M A G+ P   T+  L           EA  + +++K+
Sbjct: 364 NTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKS 423



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 195/414 (47%), Gaps = 7/414 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           RS   ++  L ++ K  +A  +F+ +      P   +Y  L+  L    + N  + +  +
Sbjct: 151 RSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQR 210

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + ++G+ P ++ +N VI+    +  ++EA++ F  M+  G  P+  T+N LI  +   GK
Sbjct: 211 MLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGK 270

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +E+ +LL  M+ +G+V P++ TY+ L+   C+   + +A +++  M     KP VVT N
Sbjct: 271 LDEAFRLLKRMTDDGHV-PDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQN 329

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+     + G   +A EV+  M  +G  P+  T   ++ G+C+ G+ + A      M   
Sbjct: 330 TLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVAR 389

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ PN+V +  L+ G  +         V A MK     P++ TY+ ++  + +AG +D  
Sbjct: 390 GLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGG 449

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES----GFHPNVVIFTT 428
            ++F +M  AGI PD   Y  LA    +     +A E+L    ES     +   V  F  
Sbjct: 450 LKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFA- 508

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            + G    G M+ A+     M   G  P  +   +L+ G  ++ Q   A  +L+
Sbjct: 509 -VDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLE 561



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 3/247 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L    +  +A+ +  ++++   KP++VT  TL+  L    R      ++ 
Sbjct: 290 VVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 349

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G  PD + +N +++    +G  E A +    M   GL P   TY  L+ G   A 
Sbjct: 350 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 409

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  +   M   G   PNL TY  L+  +C+   +     +  +M  +G+ PD V Y
Sbjct: 410 RLPEACGVFAQMKSSG-CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVY 468

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQP--NGRTCGIIISGYCKEGKIKEALRFARTM 309
            T+A    ++G + +A E++ E   +              + G  + GK++ AL F R M
Sbjct: 469 GTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDM 528

Query: 310 KEYGVHP 316
              G  P
Sbjct: 529 VRGGQLP 535



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 6/243 (2%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C+ TV +   L++ L + G+ +EA+ + + ++  G  P +VTY TL+       +
Sbjct: 316 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 375

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 ++S +   G+ P+ + + A+++   ++  + EA   F +MK SG  P   TY  
Sbjct: 376 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 435

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+  AG+ +  +KL   M   G + P+   Y  L    C       A  ++ +   S
Sbjct: 436 LILGFCSAGQVDGGLKLFGEMVCAG-ISPDHVVYGTLAAELCKSGRSARALEILREGRES 494

Query: 243 GMKPDV---VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
            ++ +      Y        + G+ + A   + +M   G  P    C  +++G CK G+ 
Sbjct: 495 -LRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQG 553

Query: 300 KEA 302
            EA
Sbjct: 554 GEA 556



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 116/283 (40%), Gaps = 35/283 (12%)

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M    V P+  + GI+I G  K GK+ +A    + +   GV P+ V +  LI G      
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            D   E+ A M      P  +TY+ +++A    G +++  ++   M + G  PD   Y+ 
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV-------- 445
           +  G  +    E+A  L   M   G  PN     TII G C    +D+A +V        
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 446 ---------------------------FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
                                      F +M + G++P+  T+  ++ G   A     A 
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEAL 240

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           E+ + M++ G  P + TF +L +A    G   EA R+L ++ +
Sbjct: 241 ELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTD 283


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 231/444 (52%), Gaps = 1/444 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L++ L  + K  +A  +F+ +++ GH+P ++TY+T++  L           ++
Sbjct: 9   TLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLL 68

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++EE G  P+ + +N +I++  +   + EAMD F +M + G+ P   TY++++ G+   
Sbjct: 69  KKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNL 128

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+  E+  L   M  E NV PN  T+ +L+   C ++ I+EAW V   M   G++PDV T
Sbjct: 129 GRVNEATSLFKQMV-ERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYT 187

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +   Y    + D+A+++   M+  G  PN R+  I+I+G+CK G+I EA      M 
Sbjct: 188 YNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMS 247

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              + P++  ++ L++GF ++       E+L  M  + + P++ITYS +++     G +D
Sbjct: 248 HKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLD 307

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  E+   M ++ I+P+   Y+IL +G     + E A EL   +   G  P VV +T +I
Sbjct: 308 EAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMI 367

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           SG    G  + A E+F +M  +G  PN  T+  ++ G+        A  +++ M   G  
Sbjct: 368 SGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFS 427

Query: 491 PQKSTFLLLAEARRATGLTKEAKR 514
              STF +L++   +  +  +  R
Sbjct: 428 ADSSTFRMLSDLESSDEIISQFMR 451



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/355 (29%), Positives = 183/355 (51%), Gaps = 7/355 (1%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M + GL PT  T+NTL+ G     K  ++VKL D M + G+ +P++ TY+ ++   C   
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGH-EPDVITYSTIINGLCKMG 59

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           N T A  ++ KM   G KP+VV YNTI  +  ++    +A +   EM   G+ P+  T  
Sbjct: 60  NTTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYS 119

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE---VLALM 344
            I+ G+C  G++ EA    + M E  V PN V F +LI G  +   +  + E   V   M
Sbjct: 120 SILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCK---KRMISEAWLVFETM 176

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            E  + PDV TY+ +++ + +   MD+ +++F+ M + G  P+  +Y+IL  G+ +    
Sbjct: 177 TEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRI 236

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           ++A+ LL  M      P++  ++T++ G+C  G    A E+  +MC +G+ PNL T+  +
Sbjct: 237 DEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIV 296

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           + G  +      A E+L+ M+   + P    + +L E     G  + A+ + S +
Sbjct: 297 LDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNL 351



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 162/312 (51%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           ++P L T+N L+   C++  I +A  +  +M   G +PDV+TY+TI     + G    A 
Sbjct: 6   LQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMAL 65

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           +++ +ME  G +PN      II   CK+  + EA+ F   M + G+ P++  ++ ++ GF
Sbjct: 66  QLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGF 125

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
             +   +    +   M E  V P+ +T++ +++       + +   +F+ M + G++PD 
Sbjct: 126 CNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDV 185

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
           + Y+ L  GY    + ++A++L   M   G  PNV  +  +I+G C  G +D A  +  +
Sbjct: 186 YTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAE 245

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M    ++P++ T+ TLM G+ +  +P  A+E+L+ M ++G+ P   T+ ++ +     G 
Sbjct: 246 MSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGH 305

Query: 509 TKEAKRILSKIK 520
             EA  +L  ++
Sbjct: 306 LDEAFELLKAMQ 317



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 126/251 (50%)

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G+QP   T   ++SG C + KI +A++    M + G  P+++ ++ +I G  ++ +    
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            ++L  M+E    P+V+ Y+TI+++      + +  + F +M K GI PD   YS +  G
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           +       +A  L   M+E    PN V FT +I G C    +  A  VF+ M E G+ P+
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + T+  L+ GY    Q   A+++  IM   G  P   ++ +L      +G   EAK +L+
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244

Query: 518 KIKNKERTNEM 528
           ++ +K  T ++
Sbjct: 245 EMSHKSLTPDI 255


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 222/452 (49%), Gaps = 1/452 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + +++    + K   A  +F  ++E G  P+LVTY TLL+ L      +  + ++ 
Sbjct: 196 VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 255

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E G+ PD   ++ ++    ++G ++ A+  F         P    Y+TLI G   AG
Sbjct: 256 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAG 315

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+ KL + M RE + +P++ T+  L+   C    + EA  V+  M      P+V+TY
Sbjct: 316 RLDEACKLFEKM-RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 374

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +++     + G+   A+EV   M   G++PN  T   +I G+C    +  AL     M  
Sbjct: 375 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 434

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P+++ +N LI G  +       + +   MK    NPDVITYS ++  +     +D 
Sbjct: 435 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDM 494

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            + +FDDM K  + PD   +S L +GY      + AE LL  M+ S   P+V  +T+++ 
Sbjct: 495 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 554

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C  G M  A  V  +M + G  PN+ T+  L+  +  A +P  A  +L+ M   GV P
Sbjct: 555 GFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQP 614

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
              T+  L      TG  +EA++IL +++  E
Sbjct: 615 NVITYRSLIGGFCGTGDLEEARKILERLERDE 646



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 220/451 (48%), Gaps = 4/451 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +  +L  +L+   +  E   I  N    G  P++ TY  ++  L      +    ++ 
Sbjct: 24  VYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLE 83

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E+G  PD+  +N VI+A  ++ N  +A+D F  M+         T+  +I G   A 
Sbjct: 84  EMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSME---CEKNVITWTIMIDGLCKAN 140

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+      M ++G V PN  TYNVL+  +C    +  A+ ++ +M  SG+ P+VVTY
Sbjct: 141 RLPEATTYFAKMKKKGTV-PNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTY 199

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +T+   + +  + D A ++  +M  NG  PN  T   ++SG C+ G + EA      M+E
Sbjct: 200 STVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRE 259

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P+   ++ L+ G  +    D   +V          PDV+ YST++     AG +D+
Sbjct: 260 RGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDE 319

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++F+ M +   +PD   ++ L  G  +    ++A+++L TM +    PNV+ ++++I 
Sbjct: 320 ACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLID 379

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G +  A EVF +M   G+ PN+ T+ +L+ G+        A  +++ M A G  P
Sbjct: 380 GLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLP 439

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              T+  L +    TG   EA R+   +K K
Sbjct: 440 DIITYNTLIDGLCKTGRAPEANRLFGDMKAK 470



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 206/447 (46%), Gaps = 37/447 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   LM  L + GK   A  +F +   G   P +V Y+TL+A L    R +    +  ++
Sbjct: 268 SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKM 327

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            EN  +PD + F A+++   +   ++EA      M++   TP   TY++LI G    G+ 
Sbjct: 328 RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQV 387

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ ++   M   G ++PN+ TYN L+  +C    +  A  +M +M A+G  PD++TYNT
Sbjct: 388 RDAQEVFKRMIVRG-IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNT 446

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G A +A  +  +M+     P+  T   +I G+CK  +I  A      M +  
Sbjct: 447 LIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA 506

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V P++V F+ L++G+      D  + +L  M     +PDV TY+++++ +   G M + +
Sbjct: 507 VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 566

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +   M K G +P+   Y+ L   + R  +P  A  LL  M+ +G  PNV+ + ++I G+
Sbjct: 567 RVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIGGF 626

Query: 434 CSDGS------------------------------------MDRAIEVFDKMCEHGVSPN 457
           C  G                                     M  A+E+ + + + G  P 
Sbjct: 627 CGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPR 686

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIM 484
              +  L+ G  + ++  +A E+L+ M
Sbjct: 687 HDIYVALIRGLCQGKELGKAMEVLEEM 713



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 202/406 (49%), Gaps = 6/406 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M + SC   V + T LM+ L +  + QEAQ +   + +    P+++TY++L+  L    +
Sbjct: 327 MRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQ 386

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +  ++   G++P+ + +N++I+ F  +  ++ A+    +M  +G  P   TYNT
Sbjct: 387 VRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNT 446

Query: 183 LIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           LI G    G+  E+ +L  D+ ++  N  P++ TY+ L+  +C  + I  A  +   M  
Sbjct: 447 LIDGLCKTGRAPEANRLFGDMKAKFCN--PDVITYSCLIGGFCKLERIDMARTLFDDMLK 504

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
             + PDVVT++T+   Y   G  D AE ++ EM  +   P+  T   ++ G+CK G++ E
Sbjct: 505 QAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVE 564

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A R  + M + G  PN+V +  LI  F           +L  M    V P+VITY +++ 
Sbjct: 565 ARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYRSLIG 624

Query: 362 AWSTAGFMDKCKEIFDDMGK-AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
            +   G +++ ++I + + +    K D  AY ++  G  R      A ELL  + +SG  
Sbjct: 625 GFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTP 684

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS-PNLKTFETLM 465
           P   I+  +I G C    + +A+EV ++M     S PN + +E ++
Sbjct: 685 PRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI 730



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 190/386 (49%), Gaps = 4/386 (1%)

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++ G D +   +N +  A   +  ++E           G+TP   TY  +I+G   +G  
Sbjct: 16  KQQGFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDL 75

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +++ +LL+ M   G V P+   YN ++ A C  +N  +A +    M     + +V+T+  
Sbjct: 76  DKACELLEEMRESGPV-PDAAIYNFVIHALCKARNTAKALDYFRSMEC---EKNVITWTI 131

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     +     +A     +M+  G  PN  T  ++I+G+CK  K+  A    + MKE G
Sbjct: 132 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 191

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + PN+V ++ +I GF      D   ++   M E    P+++TY+T+++     G MD+  
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 251

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+ D+M + G++PD  +Y  L  G  +  + + A ++          P+VV ++T+I+G 
Sbjct: 252 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 311

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G +D A ++F+KM E+   P++ TF  LM G  +  +   A+++L+ M+     P  
Sbjct: 312 CKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNV 371

Query: 494 STFLLLAEARRATGLTKEAKRILSKI 519
            T+  L +    TG  ++A+ +  ++
Sbjct: 372 ITYSSLIDGLCKTGQVRDAQEVFKRM 397



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 168/376 (44%), Gaps = 38/376 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L + G+ ++AQ +F  +I  G +P++VTY +L+    +    +S   +M 
Sbjct: 371 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 430

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  PD I +N +I+   ++G   EA   F  MK     P   TY+ LI G+    
Sbjct: 431 EMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLE 490

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + +  L D M ++  V P++ T++ LV  +CN   + +A  ++ +M AS   PDV TY
Sbjct: 491 RIDMARTLFDDMLKQA-VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTY 549

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++   + + G   +A  V+  M   G QPN  T   +I  +C+ GK   A R    M  
Sbjct: 550 TSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVG 609

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA-LMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            GV PN++ +  LI GF    D +   ++L  L ++     D+  Y  +M+     G M 
Sbjct: 610 NGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMS 669

Query: 371 KCKEIFDDMGKAGI------------------------------------KPDAHAYSIL 394
              E+ + + ++G                                     +P+A AY  +
Sbjct: 670 AALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAV 729

Query: 395 AKGYVREQEPEKAEEL 410
            +   RE   E+A  L
Sbjct: 730 IQELAREGRHEEANAL 745


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 222/452 (49%), Gaps = 1/452 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + +++    + K   A  +F  ++E G  P+LVTY TLL+ L      +  + ++ 
Sbjct: 77  VVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLD 136

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E G+ PD   ++ ++    ++G ++ A+  F         P    Y+TLI G    G
Sbjct: 137 EMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTG 196

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+ KL + M RE + +P++ T+  L+   C    + EA  V+  M      P+V+TY
Sbjct: 197 RLDEACKLFEKM-RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITY 255

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +++     + G+   A+EV   M   G++PN  T   +I G+C    +  AL     M  
Sbjct: 256 SSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTA 315

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P+++ +N LI G  +       + +   MK    NPDVITYS ++  +     +D 
Sbjct: 316 TGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDM 375

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            + +FDDM K  + PD   +S L +GY      + AE LL  M+ S   P+V  +T+++ 
Sbjct: 376 ARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVD 435

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C  G M  A  V  +M + G  PN+ T+  L+  +  A +P  A ++L+ M   GV P
Sbjct: 436 GFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQP 495

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
              T+  L      TG  +EA+++L +++  E
Sbjct: 496 NVITYRSLIGGFCGTGDLEEARKMLERLERDE 527



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 207/447 (46%), Gaps = 37/447 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   LM  L + GK   A  +F +   G   P +V Y+TL+A L    R +    +  ++
Sbjct: 149 SYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKM 208

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            EN  +PD + F A+++   +   ++EA      M++   TP   TY++LI G    G+ 
Sbjct: 209 RENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQV 268

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ ++   M   G ++PN+ TYN L+  +C    +  A  +M +M A+G  PD++TYNT
Sbjct: 269 RDAQEVFKRMIVRG-IEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNT 327

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G A +A  +  +M+     P+  T   +I G+CK  +I  A      M +  
Sbjct: 328 LIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQA 387

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V P++V F+ L++G+      D  + +L  M     +PDV TY+++++ +   G M + +
Sbjct: 388 VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEAR 447

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +   M K G +P+   Y+ L   + R  +P  A +LL  M+ +G  PNV+ + ++I G+
Sbjct: 448 RVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIGGF 507

Query: 434 CSDGS------------------------------------MDRAIEVFDKMCEHGVSPN 457
           C  G                                     M  A+E+ + + + G  P 
Sbjct: 508 CGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTPPR 567

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIM 484
              +  L+ G  + ++  +A E+L+ M
Sbjct: 568 HDIYVALIRGLCQGKELGKAMEVLEEM 594



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 179/357 (50%), Gaps = 1/357 (0%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           I +  +I+   ++  + EA   F KMK+ G  P   TYN LI G+    K   +  LL  
Sbjct: 8   ITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKE 67

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           M +E  + PN+ TY+ ++  +C +  +  A+ +  +M  +G  P++VTYNT+ +   +NG
Sbjct: 68  M-KESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 126

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
             D+A E++ EM   G+QP+  +   +++G CK GKI  AL+           P++V ++
Sbjct: 127 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 186

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            LI G  +    D   ++   M+E    PDV+T++ +M+       + + +++ + M   
Sbjct: 187 TLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDR 246

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
              P+   YS L  G  +  +   A+E+   MI  G  PNVV + ++I G+C    +D A
Sbjct: 247 NCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSA 306

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           + + ++M   G  P++ T+ TL+ G  +  +   A  +   MKA   +P   T+  L
Sbjct: 307 LLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCL 363



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 208/420 (49%), Gaps = 9/420 (2%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M + SC   V + T LM+ L +  + QEAQ +   + +    P+++TY++L+  L    +
Sbjct: 208 MRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQ 267

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +  ++   G++P+ + +N++I+ F  +  ++ A+    +M  +G  P   TYNT
Sbjct: 268 VRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNT 327

Query: 183 LIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           LI G    G+  E+ +L  D+ ++  N  P++ TY+ L+  +C  + I  A  +   M  
Sbjct: 328 LIDGLCKTGRAPEANRLFGDMKAKFCN--PDVITYSCLIGGFCKLERIDMARTLFDDMLK 385

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
             + PDVVT++T+   Y   G  D AE ++ EM  +   P+  T   ++ G+CK G++ E
Sbjct: 386 QAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVE 445

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A R  + M + G  PN+V +  LI  F          ++L  M    V P+VITY +++ 
Sbjct: 446 ARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYRSLIG 505

Query: 362 AWSTAGFMDKCKEIFDDMGK-AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
            +   G +++ +++ + + +    K D  AY ++  G  R      A ELL  + +SG  
Sbjct: 506 GFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAALELLEAIKQSGTP 565

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS-PNLKTFETLMWGYSEARQPWRAEE 479
           P   I+  +I G C    + +A+EV ++M     S PN + +E ++    E  +  R EE
Sbjct: 566 PRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAVI---QELAREGRHEE 622



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 139/285 (48%)

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           N+ T+ +++   C    + EA     KM   G  P+  TYN +   + +  +  +A  ++
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            EM+ +G+ PN  T   +I G+C++ K+  A +  R M E G  PNLV +N L+ G    
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
              D   E+L  M+E  + PD  +Y T+M      G +D   ++F+D       PD  AY
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           S L  G  +    ++A +L   M E+   P+VV FT ++ G C    +  A +V + M +
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
              +PN+ T+ +L+ G  +  Q   A+E+ + M   G+ P   T+
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTY 290



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 168/376 (44%), Gaps = 38/376 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L + G+ ++AQ +F  +I  G +P++VTY +L+    +    +S   +M 
Sbjct: 252 VITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLME 311

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  PD I +N +I+   ++G   EA   F  MK     P   TY+ LI G+    
Sbjct: 312 EMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLE 371

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + +  L D M ++  V P++ T++ LV  +CN   + +A  ++ +M AS   PDV TY
Sbjct: 372 RIDMARTLFDDMLKQA-VLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTY 430

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++   + + G   +A  V+  M   G QPN  T   +I  +C+ GK   A +    M  
Sbjct: 431 TSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVG 490

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA-LMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            GV PN++ +  LI GF    D +   ++L  L ++     D+  Y  +M+     G M 
Sbjct: 491 NGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMS 550

Query: 371 KCKEIFDDMGKAGI------------------------------------KPDAHAYSIL 394
              E+ + + ++G                                     +P+A AY  +
Sbjct: 551 AALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAYEAV 610

Query: 395 AKGYVREQEPEKAEEL 410
            +   RE   E+A  L
Sbjct: 611 IQELAREGRHEEANAL 626



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 73/273 (26%), Positives = 140/273 (51%)

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           +V+T+  +     +     +A     +M+  G  PN  T  ++I+G+CK  K+  A    
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
           + MKE G+ PN+V ++ +I GF      D   ++   M E    P+++TY+T+++     
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G MD+  E+ D+M + G++PD  +Y  L  G  +  + + A ++          P+VV +
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           +T+I+G C  G +D A ++F+KM E+   P++ TF  LM G  +  +   A+++L+ M+ 
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
               P   T+  L +    TG  ++A+ +  ++
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRM 278


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 243/448 (54%), Gaps = 1/448 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   ++N   + G   +A + ++ +++ G  P +VTY++++AAL   +  +    +++
Sbjct: 201 VVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLN 260

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +NG+ PD + +N++++ +  SG  +EA+ T  KM+  G+ P   TY++L+      G
Sbjct: 261 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNG 320

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G ++P++ TY  L++ +  +  + E   ++  M  +G++PD   +
Sbjct: 321 RSTEARKIFDSMTKRG-LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF 379

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  AYA+  + DQA  V  +M  +G+ PN    G +I   CK G + +A+ +   M +
Sbjct: 380 NILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMID 439

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN++++  LI G       D  +E++  M +  +  + I +++I+++    G + +
Sbjct: 440 EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 499

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +++FD M + G+KPD   Y+ L  G     + ++A +LL +M+  G  P++V + T+I+
Sbjct: 500 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 559

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C    MD A+ +F +M   GVSPN+ T+  ++ G    R+   A+E+   +   G   
Sbjct: 560 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 619

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
           + ST+ ++        LT EA R+   +
Sbjct: 620 ELSTYNIILHGLCKNNLTDEALRMFQNL 647



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/464 (22%), Positives = 218/464 (46%), Gaps = 38/464 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + LMN L + G+  EA+ IF+++ + G +P + TY TLL     +     +H+++ 
Sbjct: 306 VVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLD 365

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  NG+ PD   FN +I A+++   +++AM  F KM++ GL P    Y T+I     +G
Sbjct: 366 LMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSG 425

Query: 192 KPEESVKLLDLMSREGNVKPNLRTY----------------------------------- 216
             ++++   + M  EG + PN+  Y                                   
Sbjct: 426 SVDDAMLYFEQMIDEG-LTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFF 484

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N ++ + C E  + E+  +   M   G+KPD++TYNT+       G+ D+A +++  M  
Sbjct: 485 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 544

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            GV+P+  T G +I+GYC+  ++ +AL   + M   GV PN++ +N++++G         
Sbjct: 545 VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 604

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             E+   + +     ++ TY+ I++        D+   +F ++    ++ +   ++I+  
Sbjct: 605 AKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 664

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
             ++    ++A++L      +G  P+V  ++ +       GS++   ++F  M E+G S 
Sbjct: 665 ALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSA 724

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIM--KAFGVHPQKSTFLL 498
           + +   +++    +     RA   L ++  K F +    ++FLL
Sbjct: 725 DSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLL 768



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 206/441 (46%), Gaps = 40/441 (9%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI--HSIMSQVEENGMDPDSIFFN 146
           ++A+ +F+ L+  G   S+      LA +       ++  ++ M++     + P    + 
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I     +G ++        + + G      T+  L+KG     +  +++ ++     E
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA---ASGMKPDVVTYNTIATAYAQNGE 263
               P++ +YN L++  C+E    EA  ++H MA     G  PDVV+YNT+   + + G+
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216

Query: 264 ADQAE-----------------------------------EVIVEMEHNGVQPNGRTCGI 288
           +D+A                                    EV+  M  NGV P+  T   
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 276

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           I+ GYC  G+ KEA+   + M+  GV PN+V ++ L+    +        ++   M +  
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           + PD+ TY T++  ++T G + +   + D M + GI+PD H ++IL   Y ++++ ++A 
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            +   M + G +PNVV + T+I   C  GS+D A+  F++M + G++PN+  + +L+ G 
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456

Query: 469 SEARQPWRAEEILQIMKAFGV 489
               +  +AEE++  M   G+
Sbjct: 457 CTCDKWDKAEELILEMLDRGI 477



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 156/334 (46%), Gaps = 6/334 (1%)

Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V   + M+R G   V P + TY +L+   C    +   +  +  +   G + D +T
Sbjct: 70  PAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAIT 129

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +      +     A ++++  M   G  P+  +   ++ G C E + +EAL     M
Sbjct: 130 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMM 189

Query: 310 KEY---GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
            +    G  P++V +N ++ GF +  D D        M +  + PDV+TYS+I+ A   A
Sbjct: 190 ADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKA 249

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             MDK  E+ + M K G+ PD   Y+ +  GY    +P++A   L  M   G  PNVV +
Sbjct: 250 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 309

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           +++++  C +G    A ++FD M + G+ P++ T+ TL+ GY+          +L +M  
Sbjct: 310 SSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVR 369

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            G+ P    F +L  A        +A  + SK++
Sbjct: 370 NGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR 403



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 6/249 (2%)

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF-VEIMDRDGV 337
           V P   T  I+I   C+ G++         + + G   + + F  L+KG   +    D +
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF----DDMGKAGIKPDAHAYSI 393
           D VL  M E    PDV +Y+ ++          +  E+     DD G  G  PD  +Y+ 
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRG-GGSPPDVVSYNT 206

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           +  G+ +E + +KA      M++ G  P+VV +++II+  C   +MD+A+EV + M ++G
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           V P+  T+ +++ GY  + QP  A   L+ M++ GV P   T+  L       G + EA+
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326

Query: 514 RILSKIKNK 522
           +I   +  +
Sbjct: 327 KIFDSMTKR 335



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 54/267 (20%), Positives = 132/267 (49%), Gaps = 1/267 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++  C        +++S  + G+  E++ +F+ ++  G KP ++TY TL+    +  + 
Sbjct: 473 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKM 532

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +++ +   G+ PD + +  +IN +     M++A+  F +M  SG++P   TYN +
Sbjct: 533 DEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 592

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++G     +   + +L   +++ G  +  L TYN+++   C      EA  +   +  + 
Sbjct: 593 LQGLFHTRRTAAAKELYVSITKSGT-QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 651

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++ +  T+N +  A  + G  D+A+++      NG+ P+ RT  ++     ++G ++E  
Sbjct: 652 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELD 711

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVE 330
               +M+E G   +  + N +++  ++
Sbjct: 712 DLFLSMEENGCSADSRMLNSIVRKLLQ 738


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 243/448 (54%), Gaps = 1/448 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   ++N   + G   +A + ++ +++ G  P +VTY++++AAL   +  +    +++
Sbjct: 201 VVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLN 260

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +NG+ PD + +N++++ +  SG  +EA+ T  KM+  G+ P   TY++L+      G
Sbjct: 261 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNG 320

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G ++P++ TY  L++ +  +  + E   ++  M  +G++PD   +
Sbjct: 321 RSTEARKIFDSMTKRG-LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF 379

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  AYA+  + DQA  V  +M  +G+ PN    G +I   CK G + +A+ +   M +
Sbjct: 380 NILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMID 439

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN++++  LI G       D  +E++  M +  +  + I +++I+++    G + +
Sbjct: 440 EGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 499

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +++FD M + G+KPD   Y+ L  G     + ++A +LL +M+  G  P++V + T+I+
Sbjct: 500 SEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLIN 559

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C    MD A+ +F +M   GVSPN+ T+  ++ G    R+   A+E+   +   G   
Sbjct: 560 GYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQL 619

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
           + ST+ ++        LT EA R+   +
Sbjct: 620 ELSTYNIILHGLCKNNLTDEALRMFQNL 647



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/489 (22%), Positives = 226/489 (46%), Gaps = 50/489 (10%)

Query: 59  HCSFCMNKESCRTVRSM------------TKLMNSLIERGKPQEAQAIFNNLIEGGHKPS 106
           +CS    KE+  T++ M            + LMN L + G+  EA+ IF+++ + G +P 
Sbjct: 281 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 340

Query: 107 LVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW 166
           + TY TLL     +     +H+++  +  NG+ PD   FN +I A+++   +++AM  F 
Sbjct: 341 IATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFS 400

Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY---------- 216
           KM++ GL P    Y T+I     +G  ++++   + M  EG + PN+  Y          
Sbjct: 401 KMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEG-LTPNIIVYTSLIHGLCTC 459

Query: 217 -------------------------NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
                                    N ++ + C E  + E+  +   M   G+KPD++TY
Sbjct: 460 DKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 519

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+       G+ D+A +++  M   GV+P+  T G +I+GYC+  ++ +AL   + M  
Sbjct: 520 NTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVS 579

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV PN++ +N++++G           E+   + +     ++ TY+ I++        D+
Sbjct: 580 SGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDE 639

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F ++    ++ +   ++I+    ++    ++A++L      +G  P+V  ++ +  
Sbjct: 640 ALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAE 699

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM--KAFGV 489
                GS++   ++F  M E+G S + +   +++    +     RA   L ++  K F +
Sbjct: 700 NLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSL 759

Query: 490 HPQKSTFLL 498
               ++FLL
Sbjct: 760 EASTASFLL 768



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/441 (24%), Positives = 206/441 (46%), Gaps = 40/441 (9%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI--HSIMSQVEENGMDPDSIFFN 146
           ++A+ +F+ L+  G   S+      LA +       ++  ++ M++     + P    + 
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I     +G ++        + + G      T+  L+KG     +  +++ ++     E
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA---ASGMKPDVVTYNTIATAYAQNGE 263
               P++ +YN L++  C+E    EA  ++H MA     G  PDVV+YNT+   + + G+
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGD 216

Query: 264 ADQAE-----------------------------------EVIVEMEHNGVQPNGRTCGI 288
           +D+A                                    EV+  M  NGV P+  T   
Sbjct: 217 SDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 276

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           I+ GYC  G+ KEA+   + M+  GV PN+V ++ L+    +        ++   M +  
Sbjct: 277 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRG 336

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           + PD+ TY T++  ++T G + +   + D M + GI+PD H ++IL   Y ++++ ++A 
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            +   M + G +PNVV + T+I   C  GS+D A+  F++M + G++PN+  + +L+ G 
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456

Query: 469 SEARQPWRAEEILQIMKAFGV 489
               +  +AEE++  M   G+
Sbjct: 457 CTCDKWDKAEELILEMLDRGI 477



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 156/334 (46%), Gaps = 6/334 (1%)

Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V   + M+R G   V P + TY +L+   C    +   +  +  +   G + D +T
Sbjct: 70  PAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAIT 129

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +      +     A ++++  M   G  P+  +   ++ G C E + +EAL     M
Sbjct: 130 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMM 189

Query: 310 KEY---GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
            +    G  P++V +N ++ GF +  D D        M +  + PDV+TYS+I+ A   A
Sbjct: 190 ADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKA 249

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             MDK  E+ + M K G+ PD   Y+ +  GY    +P++A   L  M   G  PNVV +
Sbjct: 250 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 309

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           +++++  C +G    A ++FD M + G+ P++ T+ TL+ GY+          +L +M  
Sbjct: 310 SSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVR 369

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            G+ P    F +L  A        +A  + SK++
Sbjct: 370 NGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR 403



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 120/249 (48%), Gaps = 6/249 (2%)

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF-VEIMDRDGV 337
           V P   T  I+I   C+ G++         + + G   + + F  L+KG   +    D +
Sbjct: 88  VTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAM 147

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF----DDMGKAGIKPDAHAYSI 393
           D VL  M E    PDV +Y+ ++          +  E+     DD G  G  PD  +Y+ 
Sbjct: 148 DIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRG-GGSPPDVVSYNT 206

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           +  G+ +E + +KA      M++ G  P+VV +++II+  C   +MD+A+EV + M ++G
Sbjct: 207 VLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNG 266

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           V P+  T+ +++ GY  + QP  A   L+ M++ GV P   T+  L       G + EA+
Sbjct: 267 VMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEAR 326

Query: 514 RILSKIKNK 522
           +I   +  +
Sbjct: 327 KIFDSMTKR 335


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 129/428 (30%), Positives = 229/428 (53%), Gaps = 4/428 (0%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
            ++L   G  P++VTYT L+AA    K+      ++ ++ E G  P+ + +N +++A  +
Sbjct: 45  MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 104

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
              +  A D   KM E G  P   T+N+L+ G+   G  +++ KLL +M  +G ++PN+ 
Sbjct: 105 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKG-MRPNVV 163

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TY+ L+   C  +   EA  V+ +M ASG+ PD  TY+ +     +  + ++AE+++  M
Sbjct: 164 TYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 223

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
             +G  P+      II  +CK GK+ EA +  + M++    P++V +N +I G  ++   
Sbjct: 224 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 283

Query: 335 DGVDEVLALMKEF-RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
                +L  M+E   V PDV+TYST++N    +  + + +++ D M KAG  PD   Y+ 
Sbjct: 284 AEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTT 343

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           +  G  +    E+AE LL  M  +G  PNVV +TT+ISG C    +D A  V ++M   G
Sbjct: 344 IIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAG 403

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMK--AFGVHPQKSTFLLLAEARRATGLTKE 511
             PNL T+ T++ G   + +   A++++Q MK       P  +T+  +  A  ++ L +E
Sbjct: 404 CPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQE 463

Query: 512 AKRILSKI 519
           A+++L ++
Sbjct: 464 AEQLLEQM 471



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 230/440 (52%), Gaps = 11/440 (2%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G    A  +   +   G  P   T+T ++ A+        +   M  +   G DP+ + +
Sbjct: 4   GDLHAALELLEEMKSAGFAPDAFTHTPIITAMA---NAGDLDGAMDHLRSMGCDPNVVTY 60

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY---GIAGKPEESVKLLDL 202
            A+I AF+ +  +EEAM    +M+E G  P   TYN L+       + G  ++ VK +  
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM-- 118

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
              EG   PN+ T+N LV  +C   N+ +A  ++  M A GM+P+VVTY+ +     ++ 
Sbjct: 119 --IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
           +  +A+EV+ EM+ +GV P+  T   +I G CK  KI+EA +  R M   G  P++V+++
Sbjct: 177 KFLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYS 236

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            +I  F +        + L  M++ R +PDV+TY+T+++     G + + + I D M ++
Sbjct: 237 SIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQES 296

Query: 383 G-IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
           G + PD   YS +  G  +     +A++LL  M ++G +P+VV +TTII G C  G ++ 
Sbjct: 297 GDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEE 356

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A  +   M   G +PN+ T+ TL+ G  +AR+   AE +++ M+  G  P   T+  +  
Sbjct: 357 AEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVN 416

Query: 502 ARRATGLTKEAKRILSKIKN 521
               +G  KEA++++ ++K+
Sbjct: 417 GLCVSGRIKEAQQLVQRMKD 436



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 217/417 (52%), Gaps = 6/417 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+ +     K +EA  +   + E G  P+LVTY  L+ AL       +   ++ 
Sbjct: 57  VVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 116

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E G  P+ + FN++++ F + GN+++A      M   G+ P   TY+ LI G   + 
Sbjct: 117 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 176

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  E+ ++L+ M   G V P+  TY+ L+   C    I EA  ++ +MA SG  PDVV Y
Sbjct: 177 KFLEAKEVLEEMKASG-VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 235

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           ++I  A+ ++G+  +A++ + EM      P+  T   +I G CK GKI EA      M+E
Sbjct: 236 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQE 295

Query: 312 YG-VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            G V P++V ++ +I G  +        ++L  M +   NPDV+TY+TI++     G ++
Sbjct: 296 SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLE 355

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + + +   M +AG  P+   Y+ L  G  + ++ ++AE ++  M  +G  PN+V + T++
Sbjct: 356 EAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMV 415

Query: 431 SGWCSDGSMDRAIEVFDKMCEHG---VSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           +G C  G +  A ++  +M + G    SP+  T+ T++     +     AE++L+ M
Sbjct: 416 NGLCVSGRIKEAQQLVQRM-KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 172/331 (51%), Gaps = 5/331 (1%)

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           AG    +++LL+ M   G   P+  T+  ++ A  N  ++  A + +  M   G  P+VV
Sbjct: 3   AGDLHAALELLEEMKSAG-FAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVV 58

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +  A+A+  + ++A +++ EM   G  PN  T  +++   CK   +  A    + M
Sbjct: 59  TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 118

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            E G  PN++ FN L+ GF +  + D   ++L +M    + P+V+TYS +++    +   
Sbjct: 119 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 178

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            + KE+ ++M  +G+ PDA  YS L  G  +  + E+AE++L  M  SG  P+VV++++I
Sbjct: 179 LEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSI 238

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG- 488
           I  +C  G +  A +   +M +   SP++ T+ T++ G  +  +   A+ IL  M+  G 
Sbjct: 239 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGD 298

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           V P   T+  +      + +  EA+++L ++
Sbjct: 299 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRM 329



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 67/267 (25%), Positives = 129/267 (48%), Gaps = 3/267 (1%)

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           G+   A E++ EM+  G  P+  T   II+     G +  A+   R+M   G  PN+V +
Sbjct: 4   GDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTY 60

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
             LI  F      +   ++L  M+E    P+++TY+ +++A      +   +++   M +
Sbjct: 61  TALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIE 120

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G  P+   ++ L  G+ +    + A +LL  M+  G  PNVV ++ +I G C       
Sbjct: 121 GGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLE 180

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A EV ++M   GV+P+  T+  L+ G  +A +   AE++L+ M   G  P    +  +  
Sbjct: 181 AKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIH 240

Query: 502 ARRATGLTKEAKRILSKIKNKERTNEM 528
           A   +G   EA++ L +++ + ++ ++
Sbjct: 241 AFCKSGKLLEAQKTLQEMRKQRKSPDV 267


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 224/431 (51%), Gaps = 1/431 (0%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           K  C ++ +   L+  L++ G    A  I+  ++  G + ++ T   ++ AL   ++  +
Sbjct: 213 KGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIEN 272

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
             S +S +EE G+ PD + +N +INA+   G +EEA +    M   GL P   TYN +I 
Sbjct: 273 TKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIIN 332

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G    GK   +  +LD M + G + P+  TYN+L+   C   N+ +A  +  +M + G+ 
Sbjct: 333 GLCKTGKYLRAKGVLDEMLKIG-MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVV 391

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PD+V+++ +    ++NG  DQA +   +M++ G+ P+     I+I G+C+ G + EAL+ 
Sbjct: 392 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKV 451

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              M E G   ++V +N ++ G  +       DE+   M E  V PD  T++T++N +S 
Sbjct: 452 RDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSK 511

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G M+K   +F+ M +  +KPD   Y+ L  G+ +  E EK  EL   MI    +PN + 
Sbjct: 512 DGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 571

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +  +I+G+C+ G +  A  ++D+M E G    + T  T++ GY  A    +A+E L  M 
Sbjct: 572 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 631

Query: 486 AFGVHPQKSTF 496
             G+ P   T+
Sbjct: 632 LKGIVPDGITY 642



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 223/444 (50%), Gaps = 1/444 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N+   +G  +EA  + +++   G KP + TY  ++  L    ++     ++ 
Sbjct: 289 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLD 348

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + GM PD+  +N ++     + NM +A   F +M   G+ P   +++ LI      G
Sbjct: 349 EMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG 408

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++++K    M   G + P+   Y +L+  +C    ++EA  V  +M   G   DVVTY
Sbjct: 409 CLDQALKYFRDMKNAG-LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTY 467

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NTI     +     +A+E+  EM   GV P+  T   +I+GY K+G + +A+     M +
Sbjct: 468 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ 527

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             + P++V +N LI GF +  + + V+E+   M   R+ P+ I+Y  ++N +   G + +
Sbjct: 528 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 587

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              ++D+M + G +      + + KGY R     KA+E L  M+  G  P+ + + T+I+
Sbjct: 588 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 647

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+  + +MDRA  + +KM   G+ P++ T+  ++ G+S   +   AE I+  M   GV+P
Sbjct: 648 GFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNP 707

Query: 492 QKSTFLLLAEARRATGLTKEAKRI 515
            +ST+  L          KEA R+
Sbjct: 708 DRSTYTSLINGHVTQNNLKEAFRV 731



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 204/423 (48%), Gaps = 36/423 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++N L + GK   A+ + + +++ G  P   TY  LL              I  
Sbjct: 324 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 383

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD + F+A+I   S++G +++A+  F  MK +GL P    Y  LI G+   G
Sbjct: 384 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 443

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-------- 243
              E++K+ D M  +G V  ++ TYN ++   C EK ++EA  +  +M   G        
Sbjct: 444 VMSEALKVRDEMLEQGCV-LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 502

Query: 244 ---------------------------MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
                                      +KPDVVTYNT+   + +  E ++  E+  +M  
Sbjct: 503 TTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMIS 562

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
             + PN  + GI+I+GYC  G + EA R    M E G    ++  N ++KG+    +   
Sbjct: 563 RRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK 622

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            DE L+ M    + PD ITY+T++N +     MD+   + + M  +G+ PD   Y+++  
Sbjct: 623 ADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILN 682

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G+ R+   ++AE +++ MIE G +P+   +T++I+G  +  ++  A  V D+M + G  P
Sbjct: 683 GFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 742

Query: 457 NLK 459
           + K
Sbjct: 743 DDK 745



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 190/378 (50%), Gaps = 9/378 (2%)

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
           R   + S++      G +P  + F+ ++  + ++  + E  + F  +K  GL  + +  N
Sbjct: 166 RVEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACN 223

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           +L+ G    G  + + ++   + R G V+ N+ T N+++ A C  + I    + +  M  
Sbjct: 224 SLLGGLVKVGWVDLAWEIYQEVVRSG-VQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 282

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G+ PDVVTYNT+  AY + G  ++A E++  M   G++P   T   II+G CK GK   
Sbjct: 283 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 342

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV---DEVLALMKEFRVNPDVITYST 358
           A      M + G+ P+   +N+L+   VE    D +   + +   M    V PD++++S 
Sbjct: 343 AKGVLDEMLKIGMSPDTATYNILL---VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 399

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++   S  G +D+  + F DM  AG+ PD   Y+IL  G+ R     +A ++   M+E G
Sbjct: 400 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 459

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
              +VV + TI++G C +  +  A E+F +M E GV P+  TF TL+ GYS+     +A 
Sbjct: 460 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 519

Query: 479 EILQIMKAFGVHPQKSTF 496
            + ++M    + P   T+
Sbjct: 520 TLFEMMIQRNLKPDVVTY 537



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/374 (26%), Positives = 192/374 (51%), Gaps = 9/374 (2%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N+++    + G ++ A + + ++  SG+     T N +I       K E +   L  M  
Sbjct: 223 NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 282

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G V P++ TYN L+ A+C +  + EA+ +M  M+  G+KP V TYN I     + G+  
Sbjct: 283 KG-VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYL 341

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A+ V+ EM   G+ P+  T  I++   C+   + +A R    M   GV P+LV F+ LI
Sbjct: 342 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 401

Query: 326 KGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
                ++ ++G +D+ L   ++ +   + PD + Y+ ++  +   G M +  ++ D+M +
Sbjct: 402 G----LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 457

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G   D   Y+ +  G  +E+   +A+EL   M E G  P+   FTT+I+G+  DG+M++
Sbjct: 458 QGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNK 517

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A+ +F+ M +  + P++ T+ TL+ G+ +  +  +  E+   M +  ++P   ++ +L  
Sbjct: 518 AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN 577

Query: 502 ARRATGLTKEAKRI 515
                G   EA R+
Sbjct: 578 GYCNMGCVSEAFRL 591



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 35/309 (11%)

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           GN   N   +++LVR +   + + E       + + G+   +   N++     + G  D 
Sbjct: 178 GNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDL 237

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A E+  E+  +GVQ N  T  I+I+  CK  KI+    F   M+E GV P          
Sbjct: 238 AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFP---------- 287

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
                                    DV+TY+T++NA+   G +++  E+ D M   G+KP
Sbjct: 288 -------------------------DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKP 322

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
               Y+ +  G  +  +  +A+ +L  M++ G  P+   +  ++   C + +M  A  +F
Sbjct: 323 CVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIF 382

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           D+M   GV P+L +F  L+   S+     +A +  + MK  G+ P    + +L       
Sbjct: 383 DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 442

Query: 507 GLTKEAKRI 515
           G+  EA ++
Sbjct: 443 GVMSEALKV 451



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 72/139 (51%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   ++      G   +A    +N++  G  P  +TY TL+     ++  +   +++
Sbjct: 603 TIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALV 662

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++E +G+ PD I +N ++N FS  G M+EA     KM E G+ P  STY +LI G+   
Sbjct: 663 NKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQ 722

Query: 191 GKPEESVKLLDLMSREGNV 209
              +E+ ++ D M + G V
Sbjct: 723 NNLKEAFRVHDEMLQRGFV 741


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 216/392 (55%), Gaps = 2/392 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+   ++++  G  P++ TY  L+ AL  + R      ++  +   G  P+++ +N ++ 
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195

Query: 151 AFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           AF  +G ++ A      M+E G   P   T+N+++ G   AG+ E + K+ D M REG +
Sbjct: 196 AFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG-L 254

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            P++ +YN L+  +C    + E+  V  +M   G+ PDVVT+ ++  A  + G  +QA  
Sbjct: 255 APDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVA 314

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           ++ +M   G++ N  T   +I G+CK+G + +AL     M++ G+ P++V +N LI G+ 
Sbjct: 315 LVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYC 374

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           ++   D   E++  M+  RV PDV+TYSTI++ +   G +D   ++   M K G+ PDA 
Sbjct: 375 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            YS L +G   E+    A EL   M++ G  P+   +TT+I G C +G++++A+ + D+M
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
              GV P++ T+  L+ G S++ +   A  +L
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 141/502 (28%), Positives = 237/502 (47%), Gaps = 44/502 (8%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  P    +NAV+ A S++ ++  A      M   G+ P   TYN L++     G+ EE+
Sbjct: 113 GYAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-MKPDVVTYNTIA 255
           V ++  M R     PN  TYN LV A+C    +  A  V+  M   G  KP++VT+N++ 
Sbjct: 172 VGVVGDM-RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G  + A +V  EM   G+ P+  +   ++SGYCK G + E+L     M + G+ 
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++V F  LI    +  + +    ++A M+E  +  + +T++ +++ +   GF+D     
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            ++M K GI+P    Y+ L  GY +    + A EL+  M      P+VV ++TIISG+C 
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G++D A ++  KM + GV P+  T+ +L+ G  E ++   A E+ + M   GV P + T
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470

Query: 496 FLLLAEAR-------RATGLTKEAKR------------ILSKIKNKERTNEMEAEEDIPV 536
           +  L +         +A  L  E  R            +++ +    RT E         
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH------- 523

Query: 537 ESLERLYHKEAT--TASYPNLLQIPNVVSSDQKGSAAALKKG---RMLLRDAD----SSL 587
             L +LYH++       Y  L+      S  +  S  AL KG   + L+++AD    S L
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALML---CCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 580

Query: 588 ECSWFATTSMY--LSHS-CKSG 606
           + +W    S+Y  L H  C+ G
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGG 602



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 212/491 (43%), Gaps = 87/491 (17%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +L  RG+ +EA  +  ++   G  P+ VTY TL+AA       +    ++S + E G
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 217

Query: 138 -MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
              P+ + FN+++N   ++G ME A   F +M   GL P   +YNTL+ GY   G   ES
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK----------- 245
           + +   M++ G V P++ T+  L+ A C   N+ +A  ++ +M   G++           
Sbjct: 278 LAVFSEMTQRGLV-PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336

Query: 246 ------------------------PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
                                   P VV YN +   Y + G  D A E+I EME   V+P
Sbjct: 337 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 396

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T   IISGYCK G +  A +  + M + GV P+ + ++ LI+G  E    +   E+ 
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 456

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M +  V PD  TY+T+++     G ++K   + D+M + G+ PD   YS+L  G  + 
Sbjct: 457 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 516

Query: 402 QEPEKAEELLM------------------------------------------------- 412
              ++A  LL                                                  
Sbjct: 517 ARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVY 576

Query: 413 -TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
            +M++  +  +  +++ +I G C  G++ +A+    +M   G SPN  +  +L+ G  E 
Sbjct: 577 QSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEE 636

Query: 472 RQPWRAEEILQ 482
                A+  +Q
Sbjct: 637 GMVVEADNAIQ 647



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 189/397 (47%), Gaps = 19/397 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L++   + G   E+ A+F+ + + G  P +VT+T+L+ A           ++++
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 317

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ E G+  + + F A+I+ F + G +++A+    +M++ G+ P+   YN LI GY   G
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + + +L+  M  +  VKP++ TY+ ++  +C   N+  A+ +  KM   G+ PD +TY
Sbjct: 378 RMDLARELIREMEAK-RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 436

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +++     +    + A E+   M   GVQP+  T   +I G+CKEG +++AL     M  
Sbjct: 437 SSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR 496

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA----- 366
            GV P++V +++LI G  +         +L  +      PD I Y  +M   S A     
Sbjct: 497 KGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSV 556

Query: 367 ----------GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
                     G M +  +++  M     K D   YSIL  G+ R     KA      M+ 
Sbjct: 557 VALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLR 616

Query: 417 SGFHPNVVIFTTIISGWCSDGSM---DRAIEVFDKMC 450
           SGF PN     +++ G   +G +   D AI+     C
Sbjct: 617 SGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCC 653



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 158/311 (50%), Gaps = 6/311 (1%)

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           ++ L+R++ +    + A   +   A++G  P V  YN +  A + +     A   +  M 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALS-DASLPSARRFLSSML 144

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
            +GV PN  T  I++   C  G+++EA+     M+  G  PN V +N L+  F    + D
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 336 GVDEVLALMK-EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           G + V++LM+ E    P+++T+++++N    AG M+  +++FD+M + G+ PD  +Y+ L
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             GY +     ++  +   M + G  P+VV FT++I   C  G++++A+ +  +M E G+
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQI--MKAFGVHPQKSTFLLLAEARRATGLTKEA 512
             N  TF  L+ G+   ++ +  + +L +  M+  G+ P    +  L       G    A
Sbjct: 325 RMNEVTFTALIDGF--CKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382

Query: 513 KRILSKIKNKE 523
           + ++ +++ K 
Sbjct: 383 RELIREMEAKR 393



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 16/222 (7%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++   + G  ++A ++ + +I  G  P +VTY+ L+  L+   R    H ++ ++  
Sbjct: 472 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 531

Query: 136 NGMDPDSIFFNAV---------------INAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
               PD+I ++A+               +  F   G M+EA   +  M +       S Y
Sbjct: 532 EDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVY 591

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           + LI G+   G   +++     M R G   PN  +   LVR    E  + EA N +  + 
Sbjct: 592 SILIHGHCRGGNVRKALSFHKQMLRSG-FSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 650

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
                 D      +     + G  D   +V+  M  +G+ P+
Sbjct: 651 TCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 692


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 135/481 (28%), Positives = 229/481 (47%), Gaps = 32/481 (6%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+    +     EA+ +   + E G  P  V Y  LL  L  Q +   +  ++ 
Sbjct: 162 VITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLE 221

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E G +PD+  +N V+    ESG  EEA     KM E    P   TYN+L+ G+    
Sbjct: 222 EMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVS 281

Query: 192 KPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           K +E+ +LL D++ R     P + TY  L+  +     + +A+ VM  M  +G+ PD+VT
Sbjct: 282 KMDEAERLLEDMVGR--RCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVT 339

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +     + G+ ++A E++  M      P+  T  I+++G CK GK+ +A      M 
Sbjct: 340 YNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMML 399

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA---- 366
           E G  PNLV FN +I GF +    D   +VL LMKE    PDV+TYST+++ +  A    
Sbjct: 400 ERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQ 459

Query: 367 -------------------------GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
                                    G +++ +E+ D M K G  P +  Y+++  G    
Sbjct: 460 DAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDV 519

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
           +  ++A ++L  M E G  PN+  ++ +I+G C    ++ AI V D M E G  P++ T+
Sbjct: 520 ERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATY 579

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            +L+ G+ +  +   A +  + M+  G  P K  + +L      +G  ++A  ++  +  
Sbjct: 580 TSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLE 639

Query: 522 K 522
           K
Sbjct: 640 K 640



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 215/475 (45%), Gaps = 34/475 (7%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           +P E  + F        KPS  TY  L+   +       +  I +++      PD I  N
Sbjct: 4   RPLEGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHN 63

Query: 147 AVINAFSESGNMEEAMDTF----W-----------------------------KMKESGL 173
            ++ A+ + G+++ A+  F    W                             +M +   
Sbjct: 64  TILKAYCQIGDLDRALSHFRGKMWCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDC 123

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
            P  + YN LI G    GK + +  +L +M     V P++ TY  L+   C    + EA 
Sbjct: 124 HPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCV-PDVITYTSLIVGCCQTNALDEAR 182

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
            +M KM  SG+ PD V YN +     +  + ++  +++ EM   G +P+  +   +++  
Sbjct: 183 KLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACL 242

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           C+ GK +EA +    M E    P++V +N L+ GF ++   D  + +L  M   R  P V
Sbjct: 243 CESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTV 302

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           ITY+T++  +S A  +     + +DM KAGI PD   Y+ L  G  +  + E+A ELL  
Sbjct: 303 ITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEV 362

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M+E    P+VV ++ +++G C  G +D A  + + M E G  PNL TF T++ G+ +A +
Sbjct: 363 MVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGK 422

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEM 528
                ++L++MK     P   T+  L +        ++A  IL    +K   + M
Sbjct: 423 VDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSM 477



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 195/394 (49%), Gaps = 7/394 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM+   +  K  EA+ +  +++     P+++TYTTL+   +   R    + +M 
Sbjct: 267 VVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLADAYRVME 326

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G+ PD + +N +++   ++G +EEA +    M E    P   TY+ L+ G    G
Sbjct: 327 DMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLG 386

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +++  LL++M   G  +PNL T+N ++  +C    + E   V+  M      PDVVTY
Sbjct: 387 KVDDARLLLEMMLERG-CQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTY 445

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +T+   Y +      A  ++      G+ P+  +   ++ G C  GK++EA      M +
Sbjct: 446 STLIDGYCKANRMQDAFAIL------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTK 499

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P    + L+I G  ++   D   ++L +M E    P++ TYS ++N       ++ 
Sbjct: 500 QGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVED 559

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + D M + G  PD   Y+ L  G+ +  + + A +   TM +SG  P+ + +  +IS
Sbjct: 560 AINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILIS 619

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           G+C  G++++AIEV   M E G +P+  T+ +LM
Sbjct: 620 GFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLM 653



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 86/324 (26%), Positives = 154/324 (47%), Gaps = 7/324 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + GK +EA  +   ++E    P +VTY+ L+  L    + +    ++  + E G
Sbjct: 343 LLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERG 402

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + FN +I+ F ++G ++E       MKE   TP   TY+TLI GY  A + +++ 
Sbjct: 403 CQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAF 462

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L        + P+  +Y+ ++   C+   + EA  VM  M   G  P    Y  I   
Sbjct: 463 AIL-------GISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGG 515

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                  D+A +++  M   G +PN  T  I+I+G CK  ++++A+     M E G  P+
Sbjct: 516 LCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPD 575

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  +  LI GF +I   D   +    M++    PD + Y+ +++ +  +G ++K  E+  
Sbjct: 576 VATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQ 635

Query: 378 DMGKAGIKPDAHAYSILAKGYVRE 401
            M + G  PDA  Y  L +    E
Sbjct: 636 LMLEKGCNPDAATYFSLMRSLTTE 659


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 128/431 (29%), Positives = 224/431 (51%), Gaps = 1/431 (0%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           K  C ++ +   L+  L++ G    A  I+  ++  G + ++ T   ++ AL   ++  +
Sbjct: 56  KGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIEN 115

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
             S +S +EE G+ PD + +N +INA+   G +EEA +    M   GL P   TYN +I 
Sbjct: 116 TKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIIN 175

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G    GK   +  +LD M + G + P+  TYN+L+   C   N+ +A  +  +M + G+ 
Sbjct: 176 GLCKTGKYLRAKGVLDEMLKIG-MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVV 234

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PD+V+++ +    ++NG  DQA +   +M++ G+ P+     I+I G+C+ G + EAL+ 
Sbjct: 235 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKV 294

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              M E G   ++V +N ++ G  +       DE+   M E  V PD  T++T++N +S 
Sbjct: 295 RDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSK 354

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G M+K   +F+ M +  +KPD   Y+ L  G+ +  E EK  EL   MI    +PN + 
Sbjct: 355 DGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 414

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +  +I+G+C+ G +  A  ++D+M E G    + T  T++ GY  A    +A+E L  M 
Sbjct: 415 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 474

Query: 486 AFGVHPQKSTF 496
             G+ P   T+
Sbjct: 475 LKGIVPDGITY 485



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 223/444 (50%), Gaps = 1/444 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N+   +G  +EA  + +++   G KP + TY  ++  L    ++     ++ 
Sbjct: 132 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLD 191

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + GM PD+  +N ++     + NM +A   F +M   G+ P   +++ LI      G
Sbjct: 192 EMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG 251

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++++K    M   G + P+   Y +L+  +C    ++EA  V  +M   G   DVVTY
Sbjct: 252 CLDQALKYFRDMKNAG-LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTY 310

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NTI     +     +A+E+  EM   GV P+  T   +I+GY K+G + +A+     M +
Sbjct: 311 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ 370

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             + P++V +N LI GF +  + + V+E+   M   R+ P+ I+Y  ++N +   G + +
Sbjct: 371 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 430

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              ++D+M + G +      + + KGY R     KA+E L  M+  G  P+ + + T+I+
Sbjct: 431 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 490

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+  + +MDRA  + +KM   G+ P++ T+  ++ G+S   +   AE I+  M   GV+P
Sbjct: 491 GFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNP 550

Query: 492 QKSTFLLLAEARRATGLTKEAKRI 515
            +ST+  L          KEA R+
Sbjct: 551 DRSTYTSLINGHVTQNNLKEAFRV 574



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 204/423 (48%), Gaps = 36/423 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++N L + GK   A+ + + +++ G  P   TY  LL              I  
Sbjct: 167 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 226

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD + F+A+I   S++G +++A+  F  MK +GL P    Y  LI G+   G
Sbjct: 227 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 286

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-------- 243
              E++K+ D M  +G V  ++ TYN ++   C EK ++EA  +  +M   G        
Sbjct: 287 VMSEALKVRDEMLEQGCV-LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 345

Query: 244 ---------------------------MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
                                      +KPDVVTYNT+   + +  E ++  E+  +M  
Sbjct: 346 TTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMIS 405

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
             + PN  + GI+I+GYC  G + EA R    M E G    ++  N ++KG+    +   
Sbjct: 406 RRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK 465

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            DE L+ M    + PD ITY+T++N +     MD+   + + M  +G+ PD   Y+++  
Sbjct: 466 ADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILN 525

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G+ R+   ++AE +++ MIE G +P+   +T++I+G  +  ++  A  V D+M + G  P
Sbjct: 526 GFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 585

Query: 457 NLK 459
           + K
Sbjct: 586 DDK 588



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 190/378 (50%), Gaps = 9/378 (2%)

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
           R   + S++      G +P  + F+ ++  + ++  + E  + F  +K  GL  + +  N
Sbjct: 9   RVEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACN 66

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           +L+ G    G  + + ++   + R G V+ N+ T N+++ A C  + I    + +  M  
Sbjct: 67  SLLGGLVKVGWVDLAWEIYQEVVRSG-VQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 125

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G+ PDVVTYNT+  AY + G  ++A E++  M   G++P   T   II+G CK GK   
Sbjct: 126 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 185

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV---DEVLALMKEFRVNPDVITYST 358
           A      M + G+ P+   +N+L+   VE    D +   + +   M    V PD++++S 
Sbjct: 186 AKGVLDEMLKIGMSPDTATYNILL---VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 242

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++   S  G +D+  + F DM  AG+ PD   Y+IL  G+ R     +A ++   M+E G
Sbjct: 243 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 302

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
              +VV + TI++G C +  +  A E+F +M E GV P+  TF TL+ GYS+     +A 
Sbjct: 303 CVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAV 362

Query: 479 EILQIMKAFGVHPQKSTF 496
            + ++M    + P   T+
Sbjct: 363 TLFEMMIQRNLKPDVVTY 380



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 101/381 (26%), Positives = 195/381 (51%), Gaps = 9/381 (2%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N+++    + G ++ A + + ++  SG+     T N +I       K E +   L  M  
Sbjct: 66  NSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 125

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G V P++ TYN L+ A+C +  + EA+ +M  M+  G+KP V TYN I     + G+  
Sbjct: 126 KG-VFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYL 184

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A+ V+ EM   G+ P+  T  I++   C+   + +A R    M   GV P+LV F+ LI
Sbjct: 185 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 244

Query: 326 KGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
                ++ ++G +D+ L   ++ +   + PD + Y+ ++  +   G M +  ++ D+M +
Sbjct: 245 G----LLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLE 300

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G   D   Y+ +  G  +E+   +A+EL   M E G  P+   FTT+I+G+  DG+M++
Sbjct: 301 QGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNK 360

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A+ +F+ M +  + P++ T+ TL+ G+ +  +  +  E+   M +  ++P   ++ +L  
Sbjct: 361 AVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILIN 420

Query: 502 ARRATGLTKEAKRILSKIKNK 522
                G   EA R+  ++  K
Sbjct: 421 GYCNMGCVSEAFRLWDEMVEK 441



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 134/309 (43%), Gaps = 35/309 (11%)

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           GN   N   +++LVR +   + + E       + + G+   +   N++     + G  D 
Sbjct: 21  GNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDL 80

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A E+  E+  +GVQ N  T  I+I+  CK  KI+    F   M+E GV P          
Sbjct: 81  AWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFP---------- 130

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
                                    DV+TY+T++NA+   G +++  E+ D M   G+KP
Sbjct: 131 -------------------------DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKP 165

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
               Y+ +  G  +  +  +A+ +L  M++ G  P+   +  ++   C + +M  A  +F
Sbjct: 166 CVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIF 225

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           D+M   GV P+L +F  L+   S+     +A +  + MK  G+ P    + +L       
Sbjct: 226 DEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRN 285

Query: 507 GLTKEAKRI 515
           G+  EA ++
Sbjct: 286 GVMSEALKV 294



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 108/205 (52%), Gaps = 4/205 (1%)

Query: 317 NLVIFNLLIKGFVEIMD-RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           N ++F+LL++ +V+    R+G  E   ++K   +   +   ++++      G++D   EI
Sbjct: 26  NPLVFDLLVRTYVQARKLREGC-EAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEI 84

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           + ++ ++G++ + +  +I+     + Q+ E  +  L  M E G  P+VV + T+I+ +C 
Sbjct: 85  YQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCR 144

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G ++ A E+ D M   G+ P + T+  ++ G  +  +  RA+ +L  M   G+ P  +T
Sbjct: 145 QGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTAT 204

Query: 496 F-LLLAEARRATGLTKEAKRILSKI 519
           + +LL E  R   +  +A+RI  ++
Sbjct: 205 YNILLVECCRNDNMM-DAERIFDEM 228



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 72/139 (51%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   ++      G   +A    +N++  G  P  +TY TL+     ++  +   +++
Sbjct: 446 TIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALV 505

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++E +G+ PD I +N ++N FS  G M+EA     KM E G+ P  STY +LI G+   
Sbjct: 506 NKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQ 565

Query: 191 GKPEESVKLLDLMSREGNV 209
              +E+ ++ D M + G V
Sbjct: 566 NNLKEAFRVHDEMLQRGFV 584


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 223/431 (51%), Gaps = 1/431 (0%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           K  C ++ +   L+  L++ G    A  I+  ++  G + ++ T   ++ AL   ++  +
Sbjct: 317 KGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIEN 376

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
             S +S +EE G+ PD + +N +INA+   G +EEA +    M   GL P   TYN +I 
Sbjct: 377 TKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIIN 436

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G    GK   +  +LD M + G + P+  TYN+L+   C   N+ +A  +  +M + G+ 
Sbjct: 437 GLCKTGKYLRAKGVLDEMLKIG-MSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVV 495

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PD+V+++ +    ++NG  DQA +   +M++ G+ P+     I+I G+C+ G + EAL+ 
Sbjct: 496 PDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKV 555

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              M E G   ++V +N ++ G  +       DE+   M E  V PD  T++T++N +  
Sbjct: 556 RDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXK 615

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G M+K   +F+ M +  +KPD   Y+ L  G+ +  E EK  EL   MI    +PN + 
Sbjct: 616 DGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHIS 675

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +  +I+G+C+ G +  A  ++D+M E G    + T  T++ GY  A    +A+E L  M 
Sbjct: 676 YGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNML 735

Query: 486 AFGVHPQKSTF 496
             G+ P   T+
Sbjct: 736 LKGIVPDGITY 746



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 223/444 (50%), Gaps = 1/444 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N+   +G  +EA  + +++   G KP + TY  ++  L    ++     ++ 
Sbjct: 393 VVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLD 452

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + GM PD+  +N ++     + NM +A   F +M   G+ P   +++ LI      G
Sbjct: 453 EMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNG 512

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++++K    M   G + P+   Y +L+  +C    ++EA  V  +M   G   DVVTY
Sbjct: 513 CLDQALKYFRDMKNAG-LAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTY 571

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NTI     +     +A+E+  EM   GV P+  T   +I+GY K+G + +A+     M +
Sbjct: 572 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQ 631

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             + P++V +N LI GF +  + + V+E+   M   R+ P+ I+Y  ++N +   G + +
Sbjct: 632 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 691

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              ++D+M + G +      + + KGY R     KA+E L  M+  G  P+ + + T+I+
Sbjct: 692 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 751

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+  + +MDRA  + +KM   G+ P++ T+  ++ G+S   +   AE I+  M   GV+P
Sbjct: 752 GFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNP 811

Query: 492 QKSTFLLLAEARRATGLTKEAKRI 515
            +ST+  L          KEA R+
Sbjct: 812 DRSTYTSLINGHVTQNNLKEAFRV 835



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 203/423 (47%), Gaps = 36/423 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++N L + GK   A+ + + +++ G  P   TY  LL              I  
Sbjct: 428 VFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFD 487

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD + F+A+I   S++G +++A+  F  MK +GL P    Y  LI G+   G
Sbjct: 488 EMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNG 547

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-------- 243
              E++K+ D M  +G    ++ TYN ++   C EK ++EA  +  +M   G        
Sbjct: 548 VMSEALKVRDEMLEQG-CXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTF 606

Query: 244 ---------------------------MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
                                      +KPDVVTYNT+   + +  E ++  E+  +M  
Sbjct: 607 TTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMIS 666

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
             + PN  + GI+I+GYC  G + EA R    M E G    ++  N ++KG+    +   
Sbjct: 667 RRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVK 726

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            DE L+ M    + PD ITY+T++N +     MD+   + + M  +G+ PD   Y+++  
Sbjct: 727 ADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILN 786

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G+ R+   ++AE +++ MIE G +P+   +T++I+G  +  ++  A  V D+M + G  P
Sbjct: 787 GFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVP 846

Query: 457 NLK 459
           + K
Sbjct: 847 DDK 849



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 206/439 (46%), Gaps = 44/439 (10%)

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
           R   + S++      G +P  + F+ ++  + ++  + E  + F  +K  GL  + +  N
Sbjct: 270 RVEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACN 327

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           +L+ G    G  + + ++   + R G V+ N+ T N+++ A C  + I    + +  M  
Sbjct: 328 SLLGGLVKVGWVDLAWEIYQEVVRSG-VQVNVYTLNIMINALCKNQKIENTKSFLSDMEE 386

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G+ PDVVTYNT+  AY + G  ++A E++  M   G++P   T   II+G CK GK   
Sbjct: 387 KGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLR 446

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV---DEVLALMKEFRVNPDVITYST 358
           A      M + G+ P+   +N+L+   VE    D +   + +   M    V PD++++S 
Sbjct: 447 AKGVLDEMLKIGMSPDTATYNILL---VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSA 503

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR------------------ 400
           ++   S  G +D+  + F DM  AG+ PD   Y+IL  G+ R                  
Sbjct: 504 LIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQG 563

Query: 401 -----------------EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
                            E+   +A+EL   M E G  P+   FTT+I+G+  DG+M++A+
Sbjct: 564 CXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAV 623

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
            +F+ M +  + P++ T+ TL+ G+ +  +  +  E+   M +  ++P   ++ +L    
Sbjct: 624 TLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGY 683

Query: 504 RATGLTKEAKRILSKIKNK 522
              G   EA R+  ++  K
Sbjct: 684 CNMGCVSEAFRLWDEMVEK 702



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 72/139 (51%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   ++      G   +A    +N++  G  P  +TY TL+     ++  +   +++
Sbjct: 707 TIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALV 766

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++E +G+ PD I +N ++N FS  G M+EA     KM E G+ P  STY +LI G+   
Sbjct: 767 NKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLINGHVTQ 826

Query: 191 GKPEESVKLLDLMSREGNV 209
              +E+ ++ D M + G V
Sbjct: 827 NNLKEAFRVHDEMLQRGFV 845


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 119/392 (30%), Positives = 216/392 (55%), Gaps = 2/392 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+   ++++  G  P++ TY  L+ AL  + R      ++  +   G  P+++ +N ++ 
Sbjct: 136 ARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVA 195

Query: 151 AFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           AF  +G ++ A      M+E G   P   T+N+++ G   AG+ E + K+ D M REG +
Sbjct: 196 AFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG-L 254

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            P++ +YN L+  +C    + E+  V  +M   G+ PDVVT+ ++  A  + G  +QA  
Sbjct: 255 APDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVA 314

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           ++ +M   G++ N  T   +I G+CK+G + +AL     M++ G+ P++V +N LI G+ 
Sbjct: 315 LVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYC 374

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           ++   D   E++  M+  RV PDV+TYSTI++ +   G +D   ++   M K G+ PDA 
Sbjct: 375 KLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAI 434

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            YS L +G   E+    A EL   M++ G  P+   +TT+I G C +G++++A+ + D+M
Sbjct: 435 TYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEM 494

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
              GV P++ T+  L+ G S++ +   A  +L
Sbjct: 495 IRKGVLPDVVTYSVLINGLSKSARTKEAHRLL 526



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 141/502 (28%), Positives = 237/502 (47%), Gaps = 44/502 (8%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  P    +NAV+ A S++ ++  A      M   G+ P   TYN L++     G+ EE+
Sbjct: 113 GYAPSVPAYNAVLLALSDA-SLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-MKPDVVTYNTIA 255
           V ++  M R     PN  TYN LV A+C    +  A  V+  M   G  KP++VT+N++ 
Sbjct: 172 VGVVGDM-RGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMV 230

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G  + A +V  EM   G+ P+  +   ++SGYCK G + E+L     M + G+ 
Sbjct: 231 NGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLV 290

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++V F  LI    +  + +    ++A M+E  +  + +T++ +++ +   GF+D     
Sbjct: 291 PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLA 350

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            ++M K GI+P    Y+ L  GY +    + A EL+  M      P+VV ++TIISG+C 
Sbjct: 351 VEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCK 410

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G++D A ++  KM + GV P+  T+ +L+ G  E ++   A E+ + M   GV P + T
Sbjct: 411 VGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFT 470

Query: 496 FLLLAEAR-------RATGLTKEAKR------------ILSKIKNKERTNEMEAEEDIPV 536
           +  L +         +A  L  E  R            +++ +    RT E         
Sbjct: 471 YTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH------- 523

Query: 537 ESLERLYHKEAT--TASYPNLLQIPNVVSSDQKGSAAALKKG---RMLLRDAD----SSL 587
             L +LYH++       Y  L+      S  +  S  AL KG   + L+++AD    S L
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALML---CCSKAEFKSVVALLKGFCMKGLMKEADKVYQSML 580

Query: 588 ECSWFATTSMY--LSHS-CKSG 606
           + +W    S+Y  L H  C+ G
Sbjct: 581 DRNWKLDGSVYSILIHGHCRGG 602



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 212/491 (43%), Gaps = 87/491 (17%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +L  RG+ +EA  +  ++   G  P+ VTY TL+AA       +    ++S + E G
Sbjct: 158 LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 217

Query: 138 -MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
              P+ + FN+++N   ++G ME A   F +M   GL P   +YNTL+ GY   G   ES
Sbjct: 218 NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 277

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK----------- 245
           + +   M++ G V P++ T+  L+ A C   N+ +A  ++ +M   G++           
Sbjct: 278 LAVFSEMTQRGLV-PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 336

Query: 246 ------------------------PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
                                   P VV YN +   Y + G  D A E+I EME   V+P
Sbjct: 337 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 396

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T   IISGYCK G +  A +  + M + GV P+ + ++ LI+G  E    +   E+ 
Sbjct: 397 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 456

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M +  V PD  TY+T+++     G ++K   + D+M + G+ PD   YS+L  G  + 
Sbjct: 457 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 516

Query: 402 QEPEKAEELLM------------------------------------------------- 412
              ++A  LL                                                  
Sbjct: 517 ARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVY 576

Query: 413 -TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
            +M++  +  +  +++ +I G C  G++ +A+    +M   G SPN  +  +L+ G  E 
Sbjct: 577 QSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEE 636

Query: 472 RQPWRAEEILQ 482
                A+  +Q
Sbjct: 637 GMVVEADNAIQ 647



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 189/397 (47%), Gaps = 19/397 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L++   + G   E+ A+F+ + + G  P +VT+T+L+ A           ++++
Sbjct: 258 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 317

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ E G+  + + F A+I+ F + G +++A+    +M++ G+ P+   YN LI GY   G
Sbjct: 318 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 377

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + + +L+  M  +  VKP++ TY+ ++  +C   N+  A+ +  KM   G+ PD +TY
Sbjct: 378 RMDLARELIREMEAK-RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 436

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +++     +    + A E+   M   GVQP+  T   +I G+CKEG +++AL     M  
Sbjct: 437 SSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR 496

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA----- 366
            GV P++V +++LI G  +         +L  +      PD I Y  +M   S A     
Sbjct: 497 KGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSV 556

Query: 367 ----------GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
                     G M +  +++  M     K D   YSIL  G+ R     KA      M+ 
Sbjct: 557 VALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLR 616

Query: 417 SGFHPNVVIFTTIISGWCSDGSM---DRAIEVFDKMC 450
           SGF PN     +++ G   +G +   D AI+     C
Sbjct: 617 SGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCC 653



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 158/311 (50%), Gaps = 6/311 (1%)

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           ++ L+R++ +    + A   +   A++G  P V  YN +  A + +     A   +  M 
Sbjct: 86  FDALIRSYASLPRPSLAAAALAFAASAGYAPSVPAYNAVLLALS-DASLPSARRFLSSML 144

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
            +GV PN  T  I++   C  G+++EA+     M+  G  PN V +N L+  F    + D
Sbjct: 145 RHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELD 204

Query: 336 GVDEVLALMK-EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           G + V++LM+ E    P+++T+++++N    AG M+  +++FD+M + G+ PD  +Y+ L
Sbjct: 205 GAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTL 264

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             GY +     ++  +   M + G  P+VV FT++I   C  G++++A+ +  +M E G+
Sbjct: 265 LSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGL 324

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQI--MKAFGVHPQKSTFLLLAEARRATGLTKEA 512
             N  TF  L+ G+   ++ +  + +L +  M+  G+ P    +  L       G    A
Sbjct: 325 RMNEVTFTALIDGF--CKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382

Query: 513 KRILSKIKNKE 523
           + ++ +++ K 
Sbjct: 383 RELIREMEAKR 393


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 128/430 (29%), Positives = 229/430 (53%), Gaps = 4/430 (0%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
            ++L   G  P++VTYT L+AA    K+      ++ ++ E G  P+ + +N +++A  +
Sbjct: 167 MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCK 226

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
              +  A D   KM E G  P   T+N+L+ G+   G  +++ KLL +M  +G ++PN+ 
Sbjct: 227 LSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKG-MRPNVV 285

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TY+ L+   C  +   EA  V+ +M   G+ PD  TY+ +     +  + ++AE+++  M
Sbjct: 286 TYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 345

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
             +G  P+      II  +CK GK+ EA +  + M++    P++V +N +I G  ++   
Sbjct: 346 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 405

Query: 335 DGVDEVLALMKEF-RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
                +L  M+E   V PDV+TYST++N    +  + + +++ D M KAG  PD   Y+ 
Sbjct: 406 AEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTT 465

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           +  G  +    E+AE LL  M  +G  PNVV +TT+ISG C    +D A  V ++M   G
Sbjct: 466 IIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAG 525

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMK--AFGVHPQKSTFLLLAEARRATGLTKE 511
             PNL T+ T++ G   + +   A++++Q MK       P  +T+  +  A  ++ L +E
Sbjct: 526 CPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQE 585

Query: 512 AKRILSKIKN 521
           A+++L ++K+
Sbjct: 586 AEQLLEQMKS 595



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 234/454 (51%), Gaps = 11/454 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   +++     G    A  +   +   G  P   T+T ++ A+        +   M 
Sbjct: 112 VCSYNIVISGFCNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMA---NAGDLDGAMD 168

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG---YG 188
            +   G DP+ + + A+I AF+ +  +EEAM    +M+E G  P   TYN L+       
Sbjct: 169 HLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLS 228

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
           + G  ++ VK +     EG   PN+ T+N LV  +C   N+ +A  ++  M A GM+P+V
Sbjct: 229 MVGAAQDVVKKM----IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNV 284

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTY+ +     ++ +  +A+EV+ EM+  GV P+  T   +I G CK  KI+EA +  R 
Sbjct: 285 VTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRR 344

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M   G  P++V+++ +I  F +        + L  M++ R +PDV+TY+T+++     G 
Sbjct: 345 MAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGK 404

Query: 369 MDKCKEIFDDMGKAG-IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
           + + + I + M ++G + PD   YS +  G  +     +A++LL  M ++G +P+VV +T
Sbjct: 405 IAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYT 464

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           TII G C  G ++ A  +   M   G +PN+ T+ TL+ G  +AR+   AE +++ M+  
Sbjct: 465 TIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNA 524

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           G  P   T+  +      +G  KEA++++ ++K+
Sbjct: 525 GCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKD 558



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 223/432 (51%), Gaps = 6/432 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+ +     K +EA  +   + E G  P+LVTY  L+ AL       +   ++ 
Sbjct: 179 VVTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVK 238

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E G  P+ + FN++++ F + GN+++A      M   G+ P   TY+ LI G   + 
Sbjct: 239 KMIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQ 298

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  E+ ++L+ M   G V P+  TY+ L+   C    I EA  ++ +MA SG  PDVV Y
Sbjct: 299 KFLEAKEVLEEMKTRG-VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVY 357

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           ++I  A+ ++G+  +A++ + EM      P+  T   +I G CK GKI EA      M+E
Sbjct: 358 SSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQE 417

Query: 312 YG-VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            G V P++V ++ +I G  +        ++L  M +   NPDV+TY+TI++     G ++
Sbjct: 418 SGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLE 477

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + + +   M +AG  P+   Y+ L  G  + ++ ++AE ++  M  +G  PN+V + T++
Sbjct: 478 EAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMV 537

Query: 431 SGWCSDGSMDRAIEVFDKMCEHG---VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +G C  G +  A ++  +M + G    SP+  T+ T++     +     AE++L+ MK+ 
Sbjct: 538 NGLCVSGRIKEAQQLVQRM-KDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKST 596

Query: 488 GVHPQKSTFLLL 499
               Q+   L L
Sbjct: 597 TSSQQEQGSLTL 608



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 192/384 (50%), Gaps = 5/384 (1%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G    +  +N+++          EA D F     +   P   +YN +I G+  AG    +
Sbjct: 72  GFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAA 131

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++LL+ M   G   P+  T+  ++ A  N  ++  A + +  M   G  P+VVTY  +  
Sbjct: 132 LELLEEMKSAG-FAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIA 187

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A+A+  + ++A +++ EM   G  PN  T  +++   CK   +  A    + M E G  P
Sbjct: 188 AFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAP 247

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N++ FN L+ GF +  + D   ++L +M    + P+V+TYS +++    +    + KE+ 
Sbjct: 248 NVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVL 307

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M   G+ PDA  YS L  G  +  + E+AE++L  M  SG  P+VV++++II  +C  
Sbjct: 308 EEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKS 367

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG-VHPQKST 495
           G +  A +   +M +   SP++ T+ T++ G  +  +   A+ IL+ M+  G V P   T
Sbjct: 368 GKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVT 427

Query: 496 FLLLAEARRATGLTKEAKRILSKI 519
           +  +      + +  EA+++L ++
Sbjct: 428 YSTVINGLCKSDMLVEAQKLLDRM 451



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 151/314 (48%), Gaps = 3/314 (0%)

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           ++N L++     K   EA ++      +  +PDV +YN + + +   G+   A E++ EM
Sbjct: 79  SWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLHAALELLEEM 138

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
           +  G  P+  T   II+     G +  A+   R+M   G  PN+V +  LI  F      
Sbjct: 139 KSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSM---GCDPNVVTYTALIAAFARAKKL 195

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           +   ++L  M+E    P+++TY+ +++A      +   +++   M + G  P+   ++ L
Sbjct: 196 EEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSL 255

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G+ +    + A +LL  M+  G  PNVV ++ +I G C       A EV ++M   GV
Sbjct: 256 VDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGV 315

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
           +P+  T+  L+ G  +A +   AE++L+ M   G  P    +  +  A   +G   EA++
Sbjct: 316 TPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQK 375

Query: 515 ILSKIKNKERTNEM 528
            L +++ + ++ ++
Sbjct: 376 TLQEMRKQRKSPDV 389


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 127/424 (29%), Positives = 220/424 (51%), Gaps = 6/424 (1%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G+ PS++ Y  +L AL+      S       +  +G+ P+   +N ++ A    G+ +EA
Sbjct: 118 GYAPSVLAYNAVLLALS-DASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           +     M+ +G  P   TYNTL+  +  AG+ + + +L+D+M REG +KPNL T+N +V 
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMM-REGGLKPNLVTFNSVVN 235

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C    + +A  V  +M   G+ PD V+YNT+   Y + G + +A  V  EM   G+ P
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMP 295

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T   +I   CK G ++ A+   R M+E G+  N + F  LI GF +    D  D +L
Sbjct: 296 DVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLD--DALL 353

Query: 342 AL--MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           A+  M++ R+ P V+ Y+ ++N +   G MD+ +E+  +M   G+KPD   YS +   Y 
Sbjct: 354 AVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYC 413

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +  +   A +L   M+E+G  P+ + ++++I   C +  +  A  +F  M   G+ P+  
Sbjct: 414 KNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEV 473

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+ +L+ G+ +     RA  +   M   GV P   T+ +L      +  TKEA+R+L K+
Sbjct: 474 TYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKL 533

Query: 520 KNKE 523
            ++E
Sbjct: 534 YHEE 537



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 215/391 (54%), Gaps = 1/391 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+  F++++  G  P++ TY  L+ AL  +       S++  +   G DP+++ +N ++ 
Sbjct: 141 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVA 200

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           AF  +G ++ A      M+E GL P   T+N+++ G   AG+ E++ K+ D M +EG + 
Sbjct: 201 AFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEG-LA 259

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P+  +YN LV  +C      EA +V  +M   G+ PDVVT+ ++     + G  ++A  +
Sbjct: 260 PDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGL 319

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + EM   G+Q N  T   +I G+CK+G + +AL   R M++  + P++V +N LI G+  
Sbjct: 320 VREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCM 379

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           +   D   E++  M+   V PDV+TYSTI++A+   G      ++   M + G+ PDA  
Sbjct: 380 VGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAIT 439

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YS L +    E+    A  L   MI  G  P+ V +T++I G C +G+++RA+ + D+M 
Sbjct: 440 YSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMV 499

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           + GV P++ T+  L+ G S++ +   A+ +L
Sbjct: 500 KAGVLPDVVTYSVLINGLSKSARTKEAQRLL 530



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 206/411 (50%), Gaps = 7/411 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +L  RG  +EA ++  ++   G  P+ VTY TL+AA       +    ++  + E G
Sbjct: 163 LVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGG 222

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ + FN+V+N   ++G ME+A   F +M + GL P   +YNTL+ GY   G   E++
Sbjct: 223 LKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEAL 282

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +   M+R+G + P++ T+  L+   C   N+  A  ++ +M   G++ + +T+  +   
Sbjct: 283 SVFAEMTRKG-IMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDG 341

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G  D A   + EM    +QP+      +I+GYC  G++ EA    R M+  GV P+
Sbjct: 342 FCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPD 401

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V ++ ++  + +  D     ++   M E  V PD ITYS+++        +     +F 
Sbjct: 402 VVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFK 461

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G++PD   Y+ L  G+ +E   E+A  L   M+++G  P+VV ++ +I+G     
Sbjct: 462 NMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSA 521

Query: 438 SMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
               A  +  K+  E  V  N+K ++ LM     A      + +L ++K F
Sbjct: 522 RTKEAQRLLFKLYHEEPVPANIK-YDALMRCCRNA----ELKSVLALLKGF 567



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 134/501 (26%), Positives = 231/501 (46%), Gaps = 78/501 (15%)

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE 231
           G  P+   YN ++     A  P    +  D M  +G V PN+ TYN+LVRA C   +  E
Sbjct: 118 GYAPSVLAYNAVLLALSDASLPSAR-RFFDSMLSDG-VAPNVYTYNILVRALCGRGHRKE 175

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           A +V+  M  +G  P+ VTYNT+  A+ + GE D+AE ++  M   G++PN  T   +++
Sbjct: 176 ALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVN 235

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
           G CK G++++A +    M + G+ P+ V +N L+ G+ ++        V A M    + P
Sbjct: 236 GICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMP 295

Query: 352 DVITYSTIMNAWSTAGFMDK---------------------------CKEIFDD------ 378
           DV+T++++++    AG +++                           CK+ F D      
Sbjct: 296 DVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAV 355

Query: 379 --MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             M +  I+P    Y+ L  GY      ++A EL+  M   G  P+VV ++TI+S +C +
Sbjct: 356 REMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKN 415

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G    A ++  +M E+GV P+  T+ +L+    E ++   A  + + M + G+ P + T+
Sbjct: 416 GDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTY 475

Query: 497 LLLAEAR-------RATGLTKEAKR------------ILSKIKNKERTNEMEAEEDIPVE 537
             L +         RA  L  E  +            +++ +    RT E +        
Sbjct: 476 TSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQ-------R 528

Query: 538 SLERLYHKEATTAS--YPNLLQIPNVVSSDQKGSAAALKKG---RMLLRDAD----SSLE 588
            L +LYH+E   A+  Y  L++      + +  S  AL KG   + L+ +AD    S L+
Sbjct: 529 LLFKLYHEEPVPANIKYDALMR---CCRNAELKSVLALLKGFCMKGLMNEADKVYQSILD 585

Query: 589 CSWFATTSMY--LSHS-CKSG 606
            +W    S+Y  L H  C+ G
Sbjct: 586 RNWNLDGSVYSVLIHGHCREG 606



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/429 (24%), Positives = 197/429 (45%), Gaps = 57/429 (13%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   ++N + + G+ ++A+ +F+ +++ G  P  V+Y TL+         +   S+ +++
Sbjct: 229 TFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEM 288

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+ PD + F ++I+   ++GN+E A+    +M+E GL     T+  LI G+   G  
Sbjct: 289 TRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFL 348

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++++  +  M R+  ++P++  YN L+  +C    + EA  ++ +M A G+KPDVVTY+T
Sbjct: 349 DDALLAVREM-RQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYST 407

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           I +AY +NG+   A ++  +M  NGV P+  T   +I   C+E ++ +A    + M   G
Sbjct: 408 ILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLG 467

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTA---- 366
           + P+ V +  LI G  +      V+  L+L  E     V PDV+TYS ++N  S +    
Sbjct: 468 LQPDEVTYTSLIDGHCK---EGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSARTK 524

Query: 367 ----------------------------------------------GFMDKCKEIFDDMG 380
                                                         G M++  +++  + 
Sbjct: 525 EAQRLLFKLYHEEPVPANIKYDALMRCCRNAELKSVLALLKGFCMKGLMNEADKVYQSIL 584

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
                 D   YS+L  G+ RE    KA      M++ GF PN     ++I G    G + 
Sbjct: 585 DRNWNLDGSVYSVLIHGHCREGNVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVV 644

Query: 441 RAIEVFDKM 449
            A +V  ++
Sbjct: 645 EADQVIQQL 653



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/333 (25%), Positives = 155/333 (46%), Gaps = 1/333 (0%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           +++LIK Y                +R     P++  YN ++ A  ++ ++  A      M
Sbjct: 90  FDSLIKSYASLPSRASLAAAALAFARSAGYAPSVLAYNAVLLAL-SDASLPSARRFFDSM 148

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
            + G+ P+V TYN +  A    G   +A  V+ +M   G  PN  T   +++ +C+ G++
Sbjct: 149 LSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEV 208

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
             A R    M+E G+ PNLV FN ++ G  +    +   +V   M +  + PD ++Y+T+
Sbjct: 209 DRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEMVKEGLAPDGVSYNTL 268

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +  +   G   +   +F +M + GI PD   ++ L     +    E+A  L+  M E G 
Sbjct: 269 VGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNLERAVGLVREMRERGL 328

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
             N + FT +I G+C  G +D A+    +M +  + P++  +  L+ GY    +   A E
Sbjct: 329 QMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNALINGYCMVGRMDEARE 388

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           +++ M+A GV P   T+  +  A    G T  A
Sbjct: 389 LVREMEAKGVKPDVVTYSTILSAYCKNGDTHSA 421



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/315 (22%), Positives = 140/315 (44%), Gaps = 21/315 (6%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + ++++  + G    A  +   ++E G  P  +TY++L+  L  +KR    H +  
Sbjct: 402 VVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFK 461

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ PD + + ++I+   + GN+E A+    +M ++G+ P   TY+ LI G   + 
Sbjct: 462 NMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPDVVTYSVLINGLSKSA 521

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+ +LL  +  E  V  N++ Y+ L+R  C    +     ++      G+       
Sbjct: 522 RTKEAQRLLFKLYHEEPVPANIK-YDALMRC-CRNAELKSVLALLKGFCMKGLM------ 573

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
                      EAD+  + I++   N    +G    ++I G+C+EG + +AL F + M +
Sbjct: 574 ----------NEADKVYQSILDRNWN---LDGSVYSVLIHGHCREGNVMKALSFHKQMLQ 620

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PN      LI+G  E       D+V+  +       D      +++     G +D 
Sbjct: 621 CGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASKALIDLNLKEGNVDA 680

Query: 372 CKEIFDDMGKAGIKP 386
             ++   M + G+ P
Sbjct: 681 VLDVLHGMARDGLLP 695


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 212/385 (55%), Gaps = 2/385 (0%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           ++  G  P++ TY  L+ AL  + R      ++  +   G  P+++ +N ++ AF  +G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 158 MEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
           ++ A      M+E G   P   T+N+++ G   AG+ E + K+ D M REG + P++ +Y
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREG-LAPDVVSY 119

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N L+  +C    + E+  V  +M   G+ PDVVT+ ++  A  + G  +QA  ++ +M  
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G++ N  T   +I G+CK+G + +AL     M++ G+ P++V +N LI G+ ++   D 
Sbjct: 180 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 239

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             E++  M+  RV PDV+TYSTI++ +   G +D   ++   M K G+ PDA  YS L +
Sbjct: 240 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 299

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G   E+    A EL   M++ G  P+   +TT+I G C +G++++A+ + D+M   GV P
Sbjct: 300 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 359

Query: 457 NLKTFETLMWGYSEARQPWRAEEIL 481
           ++ T+  L+ G S++ +   A  +L
Sbjct: 360 DVVTYSVLINGLSKSARTKEAHRLL 384



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 209/411 (50%), Gaps = 6/411 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +L  RG+ +EA  +  ++   G  P+ VTY TL+AA       +    ++S + E G
Sbjct: 16  LVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEG 75

Query: 138 -MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
              P+ + FN+++N   ++G ME A   F +M   GL P   +YNTL+ GY   G   ES
Sbjct: 76  NAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHES 135

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + +   M++ G V P++ T+  L+ A C   N+ +A  ++ +M   G++ + VT+  +  
Sbjct: 136 LAVFSEMTQRGLV-PDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALID 194

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            + + G  D A   + EM   G+QP+      +I+GYCK G++  A    R M+   V P
Sbjct: 195 GFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKP 254

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++V ++ +I G+ ++ + D   ++   M +  V PD ITYS+++        ++   E+F
Sbjct: 255 DVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELF 314

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M + G++PD   Y+ L  G+ +E   EKA  L   MI  G  P+VV ++ +I+G    
Sbjct: 315 ENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKS 374

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
                A  +  K+      P+   ++ LM   S+A      + ++ ++K F
Sbjct: 375 ARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKA----EFKSVVALLKGF 421



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 133/471 (28%), Positives = 223/471 (47%), Gaps = 43/471 (9%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M   G+ P   TYN L++     G+ EE+V ++  M R     PN  TYN LV A+C   
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDM-RGAGCAPNAVTYNTLVAAFCRAG 59

Query: 228 NITEAWNVMHKMAASG-MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
            +  A  V+  M   G  KP++VT+N++     + G  + A +V  EM   G+ P+  + 
Sbjct: 60  ELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSY 119

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             ++SGYCK G + E+L     M + G+ P++V F  LI    +  + +    ++A M+E
Sbjct: 120 NTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRE 179

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             +  + +T++ +++ +   GF+D      ++M K GI+P    Y+ L  GY +    + 
Sbjct: 180 RGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDL 239

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A EL+  M      P+VV ++TIISG+C  G++D A ++  KM + GV P+  T+ +L+ 
Sbjct: 240 ARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIR 299

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR-------RATGLTKEAKR----- 514
           G  E ++   A E+ + M   GV P + T+  L +         +A  L  E  R     
Sbjct: 300 GLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLP 359

Query: 515 -------ILSKIKNKERTNEMEAEEDIPVESLERLYHKEAT--TASYPNLLQIPNVVSSD 565
                  +++ +    RT E           L +LYH++       Y  L+      S  
Sbjct: 360 DVVTYSVLINGLSKSARTKEAH-------RLLFKLYHEDPVPDNIKYDALML---CCSKA 409

Query: 566 QKGSAAALKKG---RMLLRDAD----SSLECSWFATTSMY--LSHS-CKSG 606
           +  S  AL KG   + L+++AD    S L+ +W    S+Y  L H  C+ G
Sbjct: 410 EFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGG 460



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 189/397 (47%), Gaps = 19/397 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L++   + G   E+ A+F+ + + G  P +VT+T+L+ A           ++++
Sbjct: 116 VVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVA 175

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ E G+  + + F A+I+ F + G +++A+    +M++ G+ P+   YN LI GY   G
Sbjct: 176 QMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLG 235

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + + +L+  M  +  VKP++ TY+ ++  +C   N+  A+ +  KM   G+ PD +TY
Sbjct: 236 RMDLARELIREMEAK-RVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITY 294

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +++     +    + A E+   M   GVQP+  T   +I G+CKEG +++AL     M  
Sbjct: 295 SSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIR 354

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA----- 366
            GV P++V +++LI G  +         +L  +      PD I Y  +M   S A     
Sbjct: 355 KGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSV 414

Query: 367 ----------GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
                     G M +  +++  M     K D   YSIL  G+ R     KA      M+ 
Sbjct: 415 VALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLR 474

Query: 417 SGFHPNVVIFTTIISGWCSDGSM---DRAIEVFDKMC 450
           SGF PN     +++ G   +G +   D AI+     C
Sbjct: 475 SGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLLTCC 511



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 49/222 (22%), Positives = 90/222 (40%), Gaps = 16/222 (7%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++   + G  ++A ++ + +I  G  P +VTY+ L+  L+   R    H ++ ++  
Sbjct: 330 TTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYH 389

Query: 136 NGMDPDSIFFNAV---------------INAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
               PD+I ++A+               +  F   G M+EA   +  M +       S Y
Sbjct: 390 EDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVY 449

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           + LI G+   G   +++     M R G   PN  +   LVR    E  + EA N +  + 
Sbjct: 450 SILIHGHCRGGNVRKALSFHKQMLRSG-FSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 508

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
                 D      +     + G  D   +V+  M  +G+ P+
Sbjct: 509 TCCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPS 550


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 138/447 (30%), Positives = 225/447 (50%), Gaps = 8/447 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + L+NSL   GK + A  +   +   G KP+L TY TL+  L    +F+    +++
Sbjct: 44  VVSYSCLINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLA 103

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +NG  PD   +N +I+   ++G + EA   F +M+E G  P T TYN+LI G G  G
Sbjct: 104 EMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVG 163

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +++++LL+ M R G   P++ TY+ L+     +    +A+ +  +M   G KPD +T+
Sbjct: 164 RSQKAMELLEEMERHG-CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITF 222

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +  A  + G  D A E++ EM+  GV+P   T   +I+G+ K G + EA      MK 
Sbjct: 223 TALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKR 282

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P++V ++ LI G ++    D   +VL  M++    PD ITY+T++N    AG ++ 
Sbjct: 283 NGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLND 342

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +FD M   G  PD   YS L     +    E A  L   M   G  P++  + +II+
Sbjct: 343 AGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIIT 402

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
                G +D A  +F +M   G+SP++ T+   +       +   A +I + MK  G+ P
Sbjct: 403 VLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLP 462

Query: 492 QKSTF--LLLA-----EARRATGLTKE 511
             +T+  LLL      E   A GL KE
Sbjct: 463 DVATYDALLLGLSKTKEVDDACGLLKE 489



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 220/424 (51%), Gaps = 1/424 (0%)

Query: 99  IEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNM 158
           ++G   P++VTY +LL AL    +      +  +++     PD + ++ +IN+   +G  
Sbjct: 1   MKGFPSPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKW 60

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
           E A++   +M+  G  P   TYNTL+   G AG+ +E+++LL  M   G V P++RTYN 
Sbjct: 61  EAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCV-PDVRTYNC 119

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L+        ++EA+ +  +M   G  PD  TYN++     + G + +A E++ EME +G
Sbjct: 120 LISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHG 179

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
             P+  T   +I+G  K+G+  +A +  + MK  G  P+ + F  L+    +    D   
Sbjct: 180 CPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDAL 239

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           E+L  MKE  V P V+TY+ ++  +   G + +   + D+M + G KPD   YS L  G 
Sbjct: 240 ELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGL 299

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           ++  + ++A ++L  M + G  P+ + + T+I+G    G ++ A  +FD+M   G +P++
Sbjct: 300 IKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDV 359

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+ TL+    +A +   A  + + M++ G+ P   T+  +       G   +A R+ S+
Sbjct: 360 VTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSE 419

Query: 519 IKNK 522
           ++ K
Sbjct: 420 MRGK 423



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 224/449 (49%), Gaps = 1/449 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N+L + G+ +EAQ +F  L      P +V+Y+ L+ +L    ++ +   +++
Sbjct: 9   VVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVA 68

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++  G  P+   +N +++   ++G  +EA+    +M+++G  P   TYN LI   G AG
Sbjct: 69  EMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAG 128

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  L   M   G V P+  TYN L+          +A  ++ +M   G  PDV+TY
Sbjct: 129 RLSEAFTLFAEMRERGCV-PDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTY 187

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +++ T   ++GE  +A ++  EM+  G +P+  T   ++    K G++ +AL     MKE
Sbjct: 188 SSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKE 247

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P +V +N LI GF ++ D      +L  MK     PDV+TYS ++     A  +D+
Sbjct: 248 RGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDE 307

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++   M K G  PD   Y+ L  G  +      A  L   M   G +P+VV ++T+I+
Sbjct: 308 ACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLIT 367

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
                  ++ A  +F++M   G+ P+L T+ +++    +A Q   A+ +   M+  G+ P
Sbjct: 368 ALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSP 427

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIK 520
              T+     +    G  KEA++I   +K
Sbjct: 428 DVITYNAFLNSLGRGGRFKEARKIFEDMK 456



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 214/445 (48%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L + G+ Q+A  +   +   G  P ++TY++L+  L           +  +++  G
Sbjct: 155 LIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRG 214

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PDSI F A+++A  ++G +++A++   +MKE G+ P   TYN LI G+G  G   E+ 
Sbjct: 215 RKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAY 274

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LLD M R G  KP++ TY+ L+        + EA  V+ KM   G  PD +TYNT+   
Sbjct: 275 NLLDEMKRNG-CKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLING 333

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G  + A  +   M+  G  P+  T   +I+   K  +++ A      M+  G+ P+
Sbjct: 334 LGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPD 393

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           L  +  +I    +    D  D + + M+   ++PDVITY+  +N+    G   + ++IF+
Sbjct: 394 LFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFE 453

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM ++G+ PD   Y  L  G  + +E + A  LL  +IE G   + + F   +    S G
Sbjct: 454 DMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWG 513

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
           ++D A E+       G+ P   ++  L+   ++A +   A   L+ +K  G  P   ++ 
Sbjct: 514 NVDEAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYS 573

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L  A   TG    A  +L ++  +
Sbjct: 574 SLISALGQTGQIDTAFELLEEMSKR 598



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 201/402 (50%), Gaps = 12/402 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T LM++L + G+  +A  + + + E G KP +VTY  L+A           ++++ ++
Sbjct: 221 TFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM 280

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + NG  PD + ++ +I    ++  ++EA     KM++ G  P T TYNTLI G G AG  
Sbjct: 281 KRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLL 340

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ +L D M  +G   P++ TY+ L+ A      +  A  +  +M + G++PD+ TY +
Sbjct: 341 NDAGRLFDRMKSKG-CNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCS 399

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           I T   + G+ D A+ +  EM   G+ P+  T    ++   + G+ KEA +    MKE G
Sbjct: 400 IITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESG 459

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMD 370
           + P++  ++ L+ G  +  +   VD+   L+KE        D + +   +   ++ G +D
Sbjct: 460 LLPDVATYDALLLGLSKTKE---VDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVD 516

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  E+       G+ P A +Y+ L     +     +A   L  + E G  P++V ++++I
Sbjct: 517 EAHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLI 576

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM-----WG 467
           S     G +D A E+ ++M + G+  + +++  L+     WG
Sbjct: 577 SALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKLQDWG 618



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 65/257 (25%), Positives = 120/257 (46%), Gaps = 35/257 (13%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  + C   V + + L+ +L +  + + A  +F  +   G +P L TY +++  L    +
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQ 409

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    + S++   G+ PD I +NA +N+    G  +EA   F  MKESGL P  +TY+ 
Sbjct: 410 VDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDA 469

Query: 183 LIKGYGIAGKPEESVKL-------------------LDLMSREGNVK------------- 210
           L+ G     + +++  L                   L++++  GNV              
Sbjct: 470 LLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKG 529

Query: 211 --PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
             P   +YN L+ A      ++EA+N +  +   G KPD+V+Y+++ +A  Q G+ D A 
Sbjct: 530 LWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAF 589

Query: 269 EVIVEMEHNGVQPNGRT 285
           E++ EM   G++ + R+
Sbjct: 590 ELLEEMSKRGLKLSPRS 606



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 101/209 (48%)

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN+V +N L+    +    +    +   +K  +  PDV++YS ++N+   AG  +   E+
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
             +M   G KP+   Y+ L     +  + ++A  LL  M ++G  P+V  +  +IS    
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G +  A  +F +M E G  P+  T+ +L++G  +  +  +A E+L+ M+  G  P   T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKER 524
           +  L       G T +A ++  ++K + R
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGR 215


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 225/430 (52%), Gaps = 1/430 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A A F  ++    +PS+  +   L +   +K+++++ S+ +Q++  G+  +    N +I
Sbjct: 71  DALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLI 130

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N      +++ A+    KM + G+ PT ST+N LI G    GK +E+V+L + M R G+ 
Sbjct: 131 NCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGH- 189

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +PN+ +YN ++   C   N + A +V  KM  +G KPDVVTYNTI  +  ++   + A E
Sbjct: 190 EPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAME 249

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
            + EM   G+ PN  T   ++ G+C  G++ EA R  + M    V P+ V   +L+ G  
Sbjct: 250 FLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLC 309

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +         V   M E  V P++ TY+ +M+ +     M++ K++F+ M + G  P  H
Sbjct: 310 KEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVH 369

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           +Y+IL  G+ + +  ++A+ LL  M     +P+ V ++T++ G C  G    A+ +F +M
Sbjct: 370 SYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFKEM 429

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
           C +G+ PNL T+  L+ G+ +      A ++L+ M+   + P      +L E     G  
Sbjct: 430 CSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKL 489

Query: 510 KEAKRILSKI 519
           + AK + SK+
Sbjct: 490 EVAKELFSKL 499



 Score =  219 bits (558), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 116/429 (27%), Positives = 218/429 (50%), Gaps = 34/429 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  +   L+N L   GK +EA  +FN ++  GH+P++++Y T++  L      +    + 
Sbjct: 157 TASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVF 216

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++E+NG  PD + +N +I++  +   + +AM+   +M + G+ P   TYN ++ G+ I 
Sbjct: 217 KKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCIL 276

Query: 191 GKPEESVKL-------------------LDLMSREG---------------NVKPNLRTY 216
           G+  E+ +L                   +D + +EG                V+PN+ TY
Sbjct: 277 GQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTY 336

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N L+  +C ++ + EA  V   M   G  P V +YN +   + ++   D+A+ ++ EM H
Sbjct: 337 NALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYH 396

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
             + P+  T   ++ G C+ G+ KEAL   + M  YG+ PNLV +++L+ GF +    D 
Sbjct: 397 KALNPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDE 456

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             ++L  M+E ++ P+++ ++ ++     AG ++  KE+F  +   GI+P    Y+++ K
Sbjct: 457 ALKLLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIK 516

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G ++E   ++A +L   M + GF PN   +  +I G+  +     AI + D+M     S 
Sbjct: 517 GLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSA 576

Query: 457 NLKTFETLM 465
           NL TF+ L+
Sbjct: 577 NLSTFQMLL 585



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 151/315 (47%)

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
           N +P++  +   + ++  +K  +   ++ ++M   G+  +V + N +     +    D A
Sbjct: 83  NPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFA 142

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
             ++ +M   G+ P   T   +I+G C EGKIKEA+     M   G  PN++ +N +I G
Sbjct: 143 VSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIING 202

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             +  +     +V   M++    PDV+TY+TI+++      ++   E   +M   GI P+
Sbjct: 203 LCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPN 262

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ +  G+    +  +A  L   M+     P+ V  T ++ G C +G +  A  VF+
Sbjct: 263 VFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFE 322

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            M E GV PN+ T+  LM GY   R    A+++ +IM   G  P   ++ +L      + 
Sbjct: 323 TMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSR 382

Query: 508 LTKEAKRILSKIKNK 522
              EAK +L+++ +K
Sbjct: 383 RMDEAKSLLAEMYHK 397



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 128/292 (43%), Gaps = 6/292 (2%)

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           +I +A    ++M     +P V  +     ++A+  +      +  +M+  GV  N  +  
Sbjct: 68  SIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLN 127

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           ++I+  C+   +  A+     M + G+HP    FN LI G   + +   + E + L  E 
Sbjct: 128 VLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALING---LCNEGKIKEAVELFNEM 184

Query: 348 RVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
                 P+VI+Y+TI+N     G      ++F  M + G KPD   Y+ +     +++  
Sbjct: 185 VRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLV 244

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
             A E L  M++ G  PNV  +  ++ G+C  G ++ A  +F +M    V P+  T   L
Sbjct: 245 NDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTIL 304

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           + G  +      A  + + M   GV P  ST+  L +      L  EAK++ 
Sbjct: 305 VDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF 356



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 115/264 (43%)

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
           + N   D A      M     +P+    G  +  + K+ +    +     M  +GV  N+
Sbjct: 64  STNISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNV 123

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
              N+LI     +   D    +L  M +  ++P   T++ ++N     G + +  E+F++
Sbjct: 124 YSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNE 183

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M + G +P+  +Y+ +  G  +      A ++   M ++G  P+VV + TII   C D  
Sbjct: 184 MVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRL 243

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           ++ A+E   +M + G+ PN+ T+  ++ G+    Q   A  + + M    V P   T  +
Sbjct: 244 VNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTI 303

Query: 499 LAEARRATGLTKEAKRILSKIKNK 522
           L +     G+  EA+ +   +  K
Sbjct: 304 LVDGLCKEGMVSEARLVFETMTEK 327



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 99/225 (44%)

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           I +AL     M      P++  F   +  F +      V  +   M  F V  +V + + 
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++N       +D    I   M K GI P A  ++ L  G   E + ++A EL   M+  G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PNV+ + TII+G C  G+   A++VF KM ++G  P++ T+ T++    + R    A 
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           E L  M   G+ P   T+  +       G   EA R+  ++  ++
Sbjct: 249 EFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRD 293


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 236/483 (48%), Gaps = 36/483 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+N +   GK + A  ++N ++  GH+P +++Y TL+  L      N    +  
Sbjct: 163 VITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFK 222

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++E+NG  P+ + +N +I++  +   + +AMD   +M   G+ P   TYN+++ G    G
Sbjct: 223 KMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLG 282

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ +L   M + G  KP++ TYN+++ +   ++ + +A + + +M   G+ PDVVTY
Sbjct: 283 QLNEATRLFKRMEQNG-CKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTY 341

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            TI       G+ ++A  +  +ME  G +P+      II   CK+  + +A+ F   M +
Sbjct: 342 TTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVD 401

Query: 312 YGVHPNLVIFNLLIKGFV-------------EIMDR-------------DGVDE------ 339
            G+ PN V ++ ++ GF              E++ R             DG+ +      
Sbjct: 402 RGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSE 461

Query: 340 ---VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              V   M E  V P++ TY+ +MN +     M++ +++F+ M   G  PD H+Y+IL  
Sbjct: 462 ARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILIN 521

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           GY   +  +KA+ LL  M      PN V + TI+ G C  G +  A E+F KMC  G+ P
Sbjct: 522 GYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLP 581

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
            L T+  L+ G  +      A ++ + MK   + P    + +L E     G  + AK + 
Sbjct: 582 TLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLF 641

Query: 517 SKI 519
           SK+
Sbjct: 642 SKL 644



 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 228/450 (50%), Gaps = 1/450 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
            TV S+  L+N L        A +++  + + G +P ++T+TTL+  +  + +      +
Sbjct: 126 HTVYSLNILINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVEL 185

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
            +++  +G +PD I +N +IN    SGN   A+  F KM+++G  P   TYNT+I     
Sbjct: 186 YNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCK 245

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
                +++  L  M   G + P+  TYN +V   C    + EA  +  +M  +G KPDVV
Sbjct: 246 DRLVNDAMDFLSEMVGRG-IPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVV 304

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN I  +  ++   + A + + EM   G+ P+  T   I+ G C  G++ EA+R  + M
Sbjct: 305 TYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKM 364

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           ++ G  P++V +N +I    +    +   E L+ M +  + P+ +TYSTI++ +   G +
Sbjct: 365 EQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQL 424

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D+  ++F +M    + P+   +SIL  G  +E    +A  +  TM E G  PN+  +  +
Sbjct: 425 DEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNAL 484

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           ++G+C    M+ A +VF+ M   G +P+L ++  L+ GY  +R+  +A+ +L  M    +
Sbjct: 485 MNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKL 544

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            P   T+  + +     G   +A+ +  K+
Sbjct: 545 TPNTVTYNTIMKGLCYVGRLLDAQELFKKM 574



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 226/458 (49%), Gaps = 2/458 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C+  V +   +++SL +     +A    + ++  G  P  +TY +++  L    +
Sbjct: 224 MEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQ 283

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            N    +  ++E+NG  PD + +N +I++  +   + +A D   +M + G+ P   TY T
Sbjct: 284 LNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTT 343

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           ++ G    G+  E+++L   M ++G  KP++  YN ++ + C ++ + +A   + +M   
Sbjct: 344 ILHGLCYLGQLNEAIRLFKKMEQKG-CKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDR 402

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P+ VTY+TI   +   G+ D+A ++  EM    V PN  T  I++ G C+EG + EA
Sbjct: 403 GIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEA 462

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                TM E GV PN+  +N L+ G+      +   +V  +M      PD+ +Y+ ++N 
Sbjct: 463 RWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILING 522

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +  +  MDK K +   M    + P+   Y+ + KG         A+EL   M  SG  P 
Sbjct: 523 YCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPT 582

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           ++ ++ +++G C  G +D A+++F  M E  + P++  +  L+ G     +   A+ +  
Sbjct: 583 LMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFS 642

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            + A G+ P   T+ ++ +     GL+ EA  +  K K
Sbjct: 643 KLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFRKWK 680



 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 121/427 (28%), Positives = 218/427 (51%), Gaps = 1/427 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A A F  +     +PS+V +   L ++   K+++++  + +Q++  G+       N +I
Sbjct: 76  DALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILI 135

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N      +++ A+  + KM + G+ P   T+ TLI G    GK + +V+L + M R G+ 
Sbjct: 136 NCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGH- 194

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +P++ +YN L+   CN  N   A +V  KM  +G KP+VVTYNTI  +  ++   + A +
Sbjct: 195 EPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMD 254

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
            + EM   G+ P+  T   I+ G C  G++ EA R  + M++ G  P++V +N++I    
Sbjct: 255 FLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLY 314

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +    +   + L+ M +  + PDV+TY+TI++     G +++   +F  M + G KPD  
Sbjct: 315 KDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVV 374

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           AY+ +     +++    A E L  M++ G  PN V ++TI+ G+C+ G +D A ++F +M
Sbjct: 375 AYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM 434

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
               V PN  TF  L+ G  +      A  + + M   GV P   T+  L          
Sbjct: 435 VGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKM 494

Query: 510 KEAKRIL 516
            EA+++ 
Sbjct: 495 NEARKVF 501



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 200/398 (50%), Gaps = 1/398 (0%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           S+  ++ + G+ PD I F  +IN     G ++ A++ + +M  SG  P   +YNTLI G 
Sbjct: 149 SVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGL 208

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
             +G    +V +   M + G  KPN+ TYN ++ + C ++ + +A + + +M   G+ PD
Sbjct: 209 CNSGNTNMAVHVFKKMEQNG-CKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPD 267

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
            +TYN+I       G+ ++A  +   ME NG +P+  T  III    K+  + +A  F  
Sbjct: 268 AITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLS 327

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M + G+ P++V +  ++ G   +   +    +   M++    PDV+ Y+TI+++     
Sbjct: 328 EMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDR 387

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            ++   E   +M   GI P+A  YS +  G+    + ++A +L   M+     PN + F+
Sbjct: 388 LVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFS 447

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            ++ G C +G +  A  VF+ M E GV PN+ T+  LM GY    +   A ++ +IM   
Sbjct: 448 ILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGK 507

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
           G  P   ++ +L      +    +AK +L+++  K+ T
Sbjct: 508 GCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLT 545



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 112/259 (43%)

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D A      M     +P+    G  +    K  +    +     M  +GV   +   N+
Sbjct: 74  VDDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNI 133

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           LI     +   D    V   M +  + PDVIT++T++N     G +    E++++M ++G
Sbjct: 134 LINCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSG 193

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
            +PD  +Y+ L  G         A  +   M ++G  PNVV + TII   C D  ++ A+
Sbjct: 194 HEPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAM 253

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           +   +M   G+ P+  T+ +++ G     Q   A  + + M+  G  P   T+ ++ ++ 
Sbjct: 254 DFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSL 313

Query: 504 RATGLTKEAKRILSKIKNK 522
               L  +A   LS++ ++
Sbjct: 314 YKDRLVNDAADFLSEMVDQ 332


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 120/392 (30%), Positives = 220/392 (56%), Gaps = 2/392 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQ-KRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           A+ +  +++  G  P++ TY  L+ AL  + +R  ++  +   +   G  P+ + +N ++
Sbjct: 138 ARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNVVTYNTLV 197

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
            AF  +G ++ A      M+E G+ P+  T+NT++ G   AG+ E++ K+ D M+REG +
Sbjct: 198 AAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEMAREG-L 256

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            P+  +YN LV  +C    + EA  V  +MA  G+ PDVVT+ ++  A  + G  ++A  
Sbjct: 257 TPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNLERAVA 316

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           ++ +M   G++ N  T   +I G+C+ G + +AL   + M+E  + P++V +N+LI G+ 
Sbjct: 317 LVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVLINGYC 376

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           ++   D   E++  M+   + PDV+TYSTI++ +   G  D   E+   M K G+ PDA 
Sbjct: 377 KLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGVVPDAI 436

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            YS L +G   E+    A EL   M++ G  P+   +TT+I G C +G++ +A+ + D+M
Sbjct: 437 TYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALSLHDEM 496

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            + GV P++ T+  L+ G S++ +   A+ +L
Sbjct: 497 IKKGVLPDVVTYSVLIDGLSKSARTKEAQRLL 528



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 208/418 (49%), Gaps = 36/418 (8%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  P  + +NAV+ A S++ ++  A      M   G+ P   TYN L++     G+ EE+
Sbjct: 115 GYAPSLLAYNAVLLALSDA-SLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEA 173

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + ++    R     PN+ TYN LV A+C    +  A  ++  M   G++P +VT+NT+  
Sbjct: 174 LGVVGDDMRGAGCAPNVVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVN 233

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              + G  + A ++  EM   G+ P+G +   ++SGYCK G + EAL     M + GV P
Sbjct: 234 GLCKAGRMEDARKMFDEMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVP 293

Query: 317 NLVIFNLLIKG----------------------------FVEIMD---RDGV--DEVLAL 343
           ++V F  LI                              F  ++D   R+G   D +LA+
Sbjct: 294 DVVTFTSLIHAMCRAGNLERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAM 353

Query: 344 --MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M+E R+ P V+ Y+ ++N +   G MD+ +E+  +M   G+KPD   YS +  GY + 
Sbjct: 354 KEMRECRIQPSVVCYNVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKI 413

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            + + A EL   M++ G  P+ + ++++I G C +  +  A E+F+KM + G+ P+  T+
Sbjct: 414 GDTDSAFELNRKMLKKGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTY 473

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            TL+ G+ +     +A  +   M   GV P   T+ +L +    +  TKEA+R+L K+
Sbjct: 474 TTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKL 531



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 217/465 (46%), Gaps = 16/465 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+ +    G+   A+ +   + EGG +PSLVT+ T++  L    R      +  
Sbjct: 190 VVTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFD 249

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD + +N +++ + ++G + EA+  F +M + G+ P   T+ +LI     AG
Sbjct: 250 EMAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAG 309

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E +V L+  M RE  ++ N  T+  L+  +C    + +A   M +M    ++P VV Y
Sbjct: 310 NLERAVALVGQM-RERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCY 368

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y + G  D+A E+I EME  G++P+  T   I+SGYCK G    A    R M +
Sbjct: 369 NVLINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLK 428

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P+ + ++ LI+G  E        E+   M +  + PD  TY+T+++     G + K
Sbjct: 429 KGVVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQK 488

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF----- 426
              + D+M K G+ PD   YS+L  G  +    ++A+ LL  +      P+ + +     
Sbjct: 489 ALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMH 548

Query: 427 ----------TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
                       ++ G+   G M++A +V+  M +     +   +  L+ G+       +
Sbjct: 549 CCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMK 608

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           A    + +   G  P  ++ + L       G+T EA  ++ ++ N
Sbjct: 609 ALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELLN 653


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 228/428 (53%), Gaps = 7/428 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L+N L + GK  +A  +F++++  G++P + TYTT++  L       +   + 
Sbjct: 191 TIVTFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLF 250

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ E G  PD + ++ +I++  +   + EA+D F  MK  G++P   TYN+LI+G    
Sbjct: 251 RKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNF 310

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +  E+  +L+ M    N+ PN+ T+++L+  +C E N+ EA  V+  M   G++P+VVT
Sbjct: 311 SRWREASAMLNEM-MSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVT 369

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+++   Y+   E  +A ++   M   G +P+  +  I+I+GYCK  +I EA +    M 
Sbjct: 370 YSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMI 429

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAG 367
             G+ P++V +N LI G  ++     + E   L K    N   PD+ TYS +++ +   G
Sbjct: 430 HQGLTPDIVSYNTLIDGLCQL---GRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQG 486

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
           ++ K   +F  M    +KP+   Y+IL     + +  ++A +L   +   G  PNV I+T
Sbjct: 487 YLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYT 546

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           TII+G C +G +D A+E F  M E G  PN  ++  ++ G+ + +   RA +++  M+  
Sbjct: 547 TIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREK 606

Query: 488 GVHPQKST 495
           G     +T
Sbjct: 607 GFVADVAT 614



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 226/431 (52%), Gaps = 2/431 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF-NSIHSIMSQVEENGMDPDSIFFNAV 148
           +A A FN+++    +P ++ +  LL+A+   + + +++ S+  Q+E  G+ PD+   + +
Sbjct: 104 DALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHML 163

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           IN F +   ++       K+ + GL  T  T+NTLI G    GK  ++V+L D M   G 
Sbjct: 164 INCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG- 222

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            +P++ TY  ++   C       A  +  KM  +G +PDVVTY+TI  +  ++   ++A 
Sbjct: 223 YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 282

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           ++   M+  G+ PN  T   +I G C   + +EA      M    + PN+V F+LLI  F
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 342

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +  +      VL  M E  V P+V+TYS++MN +S    + + +++FD M   G KPD 
Sbjct: 343 CKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDV 402

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
            +Y+IL  GY + +   +A++L   MI  G  P++V + T+I G C  G +  A ++F  
Sbjct: 403 FSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKN 462

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M  +G  P+L T+  L+ G+ +     +A  + + M++  + P    + +L +A   +  
Sbjct: 463 MLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRN 522

Query: 509 TKEAKRILSKI 519
            KEA+++ S++
Sbjct: 523 LKEARKLFSEL 533



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/367 (22%), Positives = 172/367 (46%)

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N  S   N+++A+  F  M      P    +N L+          ++V  L        +
Sbjct: 94  NDASSFRNIDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGL 153

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            P+  T ++L+  +   + +   ++V+ K+   G++  +VT+NT+     + G+  QA E
Sbjct: 154 SPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVE 213

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  +M   G QP+  T   II+G CK G+   A    R M E G  P++V ++ +I    
Sbjct: 214 LFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLC 273

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +    +   ++ + MK   ++P++ TY++++          +   + ++M    I P+  
Sbjct: 274 KDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIV 333

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            +S+L   + +E    +A  +L TM E G  PNVV ++++++G+     +  A ++FD M
Sbjct: 334 TFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVM 393

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G  P++ ++  L+ GY +A++   A+++   M   G+ P   ++  L +     G  
Sbjct: 394 ITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRL 453

Query: 510 KEAKRIL 516
           +EA  + 
Sbjct: 454 REAHDLF 460



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 100/455 (21%), Positives = 185/455 (40%), Gaps = 122/455 (26%)

Query: 40  GEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLI 99
           G+  +L+ +      QP  H              + T ++N L + G+   A  +F  + 
Sbjct: 209 GQAVELFDDMVARGYQPDVH--------------TYTTIINGLCKIGETVAAAGLFRKMG 254

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI---------- 149
           E G +P +VTY+T++ +L   +R N    I S ++  G+ P+   +N++I          
Sbjct: 255 EAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWR 314

Query: 150 -------------------------NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
                                    N F + GN+ EA      M E G+ P   TY++L+
Sbjct: 315 EASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLM 374

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            GY +  +  E+ KL D+M  +G  KP++ +YN+L+  +C  K I EA  + ++M   G+
Sbjct: 375 NGYSLQAEVVEARKLFDVMITKG-CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGL 433

Query: 245 KPD-----------------------------------VVTYNTIATAYAQNGEADQAEE 269
            PD                                   + TY+ +   + + G   +A  
Sbjct: 434 TPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFR 493

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +   M+   ++PN     I+I   CK   +KEA +    +   G+ PN+ I+  +I G  
Sbjct: 494 LFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLC 553

Query: 330 EIMDRDG-VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
               ++G +DE L   + FR                             +M + G  P+ 
Sbjct: 554 ----KEGLLDEAL---EAFR-----------------------------NMEEDGCPPNE 577

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
            +Y+++ +G+++ ++  +A +L+  M E GF  +V
Sbjct: 578 FSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADV 612


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 243/449 (54%), Gaps = 3/449 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N   + G   +A   ++ +++ G  P++VTY++++AAL   +  +    +++
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +NG+ P+   +N++++ +  SG  +EA+    KM   G+ P   TYN+L+      G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G +KP + TY  L++ +  +  + E   ++  M  +G+ P+   +
Sbjct: 319 RCTEARKMFDSMTKRG-LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  AYA+ G+ DQA  V  +M   G+ P+  T G +I   CK G++++A+R+   M +
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 312 YGVHPNLVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             + P  +++N LI     I D+ D   E++  M +  +  D I +++I+++    G + 
Sbjct: 438 ERLSPGNIVYNSLIHSLC-IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +++FD M + G+KPD   YS L  GY    + ++A +LL +M+  G  P+ V + T+I
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+C    M+ A+ +F +M   GVSP++ T+  ++ G  + R+   A+E+   +   G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + ST+ ++        LT EA R+   +
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNL 645



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 216/426 (50%), Gaps = 4/426 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAI-FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           + T ++  L    +  +A  I    + + G  P++ +Y  LL  L    R      ++  
Sbjct: 128 AFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQM 187

Query: 133 VEENGMD--PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + ++G D  PD + +  VIN F + G++++A  T+ +M + G+ P   TY+++I     A
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              ++++++L  M + G V PN RTYN +V  +C+     EA   + KM + G++PDVVT
Sbjct: 248 QAMDKAMEVLTSMVKNG-VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++     +NG   +A ++   M   G++P   T G ++ GY  +G + E       M 
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+HPN  +F++LI  + +    D    V + M++  +NPD +TY T++     +G ++
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                F+ M    + P    Y+ L        + +KA+EL++ M++ G   + + F +II
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C +G +  + ++FD M   GV P++ T+ TL+ GY  A +   A ++L  M + G+ 
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546

Query: 491 PQKSTF 496
           P   T+
Sbjct: 547 PDCVTY 552



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 207/412 (50%), Gaps = 5/412 (1%)

Query: 83  IERGKPQEAQAIFNNLIEGGHK---PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           + R  P  A + +N +   G     P+L TY  L+ +     R +   + +  V + G  
Sbjct: 64  VARHSPAAAVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFI 123

Query: 140 PDSIFFNAVINAFSESGNMEEAMD-TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            D+I F  ++          +AMD    +M + G  P   +YN L+KG     + +E+++
Sbjct: 124 VDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALE 183

Query: 199 LLDLMSRE-GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           LL +M  + G+  P++ +Y  ++  +  E ++ +A+   H+M   G+ P+VVTY++I  A
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+A EV+  M  NGV PN RT   I+ GYC  G+ KEA+ F + M   GV P+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N L+    +        ++   M +  + P++ TY T++  ++T G + +   + D
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + GI P+ + +SIL   Y ++ + ++A  +   M + G +P+ V + T+I   C  G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            ++ A+  F++M +  +SP    + +L+       +  +A+E++  M   G+
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/463 (22%), Positives = 223/463 (48%), Gaps = 36/463 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM+ L + G+  EA+ +F+++ + G KP + TY TLL     +     +H ++ 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  NG+ P+   F+ +I A+++ G +++AM  F KM++ GL P T TY T+I     +G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 192 KPEESVKLLDLMSRE----GNVKPN----------------------------LRT--YN 217
           + E++++  + M  E    GN+  N                            L T  +N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++ + C E  + E+  +   M   G+KPD++TY+T+   Y   G+ D+A +++  M   
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G++P+  T   +I+GYCK  ++++AL   R M+  GV P+++ +N++++G  +       
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E+   + E     ++ TY+ I++        D+   +F ++    ++ +   ++I+   
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
            ++    ++A++L   +  +G  P+V  ++ +       G ++   ++F  M E+G + N
Sbjct: 664 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 723

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIM--KAFGVHPQKSTFLL 498
            +   +++    +     RA   L ++  K F +    ++  L
Sbjct: 724 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL 766



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 156/335 (46%), Gaps = 5/335 (1%)

Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V   + M+R G   V PNL TY +L+ + C    +   +  +  +   G   D + 
Sbjct: 69  PAAAVSRYNRMARAGADEVTPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIA 128

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +      +     A ++++  M   G  PN  +  I++ G C + + +EAL   + M
Sbjct: 129 FTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMM 188

Query: 310 KEYG--VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            + G    P++V +  +I GF +  D D        M +  + P+V+TYS+I+ A   A 
Sbjct: 189 PDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQ 248

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            MDK  E+   M K G+ P+   Y+ +  GY    +P++A   L  M   G  P+VV + 
Sbjct: 249 AMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYN 308

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +++   C +G    A ++FD M + G+ P + T+ TL+ GY+          +L +M   
Sbjct: 309 SLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 368

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G+HP    F +L  A    G   +A  + SK++ +
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 147/301 (48%), Gaps = 1/301 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++  C        +++S  + G+  E++ +F+ ++  G KP ++TY+TL+    +  + 
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +++ +   GM PD + +N +IN + +   ME+A+  F +M+ SG++P   TYN +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++G     +   + K L +   E   +  L TYN+++   C      EA  +   +  + 
Sbjct: 591 LQGL-FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++ +  T+N +  A  + G  D+A+++   +  NG+ P+ RT  ++     ++G ++E  
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
               +M+E G   N  + N +++  ++  D       L ++ E   + +  T S  ++  
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769

Query: 364 S 364
           S
Sbjct: 770 S 770


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 243/449 (54%), Gaps = 3/449 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N   + G   +A   ++ +++ G  P++VTY++++AAL   +  +    +++
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +NG+ P+   +N++++ +  SG  +EA+    KM   G+ P   TYN+L+      G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G +KP + TY  L++ +  +  + E   ++  M  +G+ P+   +
Sbjct: 319 RCTEARKMFDSMTKRG-LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  AYA+ G+ DQA  V  +M   G+ P+  T G +I   CK G++++A+R+   M +
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 312 YGVHPNLVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             + P  +++N LI     I D+ D   E++  M +  +  D I +++I+++    G + 
Sbjct: 438 ERLSPGNIVYNSLIHSLC-IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +++FD M + G+KPD   YS L  GY    + ++A +LL +M+  G  P+ V + T+I
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+C    M+ A+ +F +M   GVSP++ T+  ++ G  + R+   A+E+   +   G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + ST+ ++        LT EA R+   +
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNL 645



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 217/426 (50%), Gaps = 4/426 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAI-FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           + T L+  L    +  +A  I    + + G  P++ +Y  LL  L  + R      ++  
Sbjct: 128 AFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187

Query: 133 VEENGMD--PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + ++G D  PD + +  VIN F + G++++A  T+ +M + G+ P   TY+++I     A
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              ++++++L  M + G V PN RTYN +V  +C+     EA   + KM + G++PDVVT
Sbjct: 248 QAMDKAMEVLTSMVKNG-VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++     +NG   +A ++   M   G++P   T G ++ GY  +G + E       M 
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+HPN  +F++LI  + +    D    V + M++  +NPD +TY T++     +G ++
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                F+ M    + P    Y+ L        + +KA+EL++ M++ G   + + F +II
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C +G +  + ++FD M   GV P++ T+ TL+ GY  A +   A ++L  M + G+ 
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546

Query: 491 PQKSTF 496
           P   T+
Sbjct: 547 PDCVTY 552



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 207/412 (50%), Gaps = 5/412 (1%)

Query: 83  IERGKPQEAQAIFNNLIEGGHK---PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           + R  P  A + +N +   G     P+L TY  L+ +     R +   + +  V + G  
Sbjct: 64  VARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFR 123

Query: 140 PDSIFFNAVINAFSESGNMEEAMD-TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            D+I F  ++          +AMD    +M + G  P   +YN L+KG     + +E+++
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183

Query: 199 LLDLMSRE-GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           LL +M  + G+  P++ +Y  ++  +  E ++ +A+   H+M   G+ P+VVTY++I  A
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+A EV+  M  NGV PN RT   I+ GYC  G+ KEA+ F + M   GV P+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N L+    +        ++   M +  + P++ TY T++  ++T G + +   + D
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + GI P+ + +SIL   Y ++ + ++A  +   M + G +P+ V + T+I   C  G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            ++ A+  F++M +  +SP    + +L+       +  +A+E++  M   G+
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/463 (22%), Positives = 223/463 (48%), Gaps = 36/463 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM+ L + G+  EA+ +F+++ + G KP + TY TLL     +     +H ++ 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  NG+ P+   F+ +I A+++ G +++AM  F KM++ GL P T TY T+I     +G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 192 KPEESVKLLDLMSRE----GNVKPN----------------------------LRT--YN 217
           + E++++  + M  E    GN+  N                            L T  +N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++ + C E  + E+  +   M   G+KPD++TY+T+   Y   G+ D+A +++  M   
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G++P+  T   +I+GYCK  ++++AL   R M+  GV P+++ +N++++G  +       
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E+   + E     ++ TY+ I++        D+   +F ++    ++ +   ++I+   
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
            ++    ++A++L   +  +G  P+V  ++ +       G ++   ++F  M E+G + N
Sbjct: 664 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 723

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIM--KAFGVHPQKSTFLL 498
            +   +++    +     RA   L ++  K F +    ++  L
Sbjct: 724 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL 766



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 157/335 (46%), Gaps = 5/335 (1%)

Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V   + M+R G   V PNL TY +L+ + C    +   +  +  +   G + D + 
Sbjct: 69  PAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIA 128

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +      +     A ++++  M   G  PN  +  I++ G C E + +EAL   + M
Sbjct: 129 FTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMM 188

Query: 310 KEYG--VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            + G    P++V +  +I GF +  D D        M +  + P+V+TYS+I+ A   A 
Sbjct: 189 PDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQ 248

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            MDK  E+   M K G+ P+   Y+ +  GY    +P++A   L  M   G  P+VV + 
Sbjct: 249 AMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYN 308

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +++   C +G    A ++FD M + G+ P + T+ TL+ GY+          +L +M   
Sbjct: 309 SLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 368

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G+HP    F +L  A    G   +A  + SK++ +
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 147/301 (48%), Gaps = 1/301 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++  C        +++S  + G+  E++ +F+ ++  G KP ++TY+TL+    +  + 
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +++ +   GM PD + +N +IN + +   ME+A+  F +M+ SG++P   TYN +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++G     +   + K L +   E   +  L TYN+++   C      EA  +   +  + 
Sbjct: 591 LQGL-FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++ +  T+N +  A  + G  D+A+++   +  NG+ P+ RT  ++     ++G ++E  
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
               +M+E G   N  + N +++  ++  D       L ++ E   + +  T S  ++  
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769

Query: 364 S 364
           S
Sbjct: 770 S 770


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 225/445 (50%), Gaps = 10/445 (2%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           ++E   KP +  Y  L++      +  + + ++ +++  G  PD + +N +I +F   G 
Sbjct: 129 ILERYGKPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGK 188

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           ++ A++ F ++ +    PT  TY  LI+   + G  + ++KLLD M  +G ++P+  TYN
Sbjct: 189 LDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKG-LEPDTLTYN 247

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++R  C E  + +A+ ++  +++ G KPD++TYN +       G+  + E++I EM   
Sbjct: 248 AIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISI 307

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G +PN  T  I+I   C++GK++EA+   R+MKE G+ P+   ++ LI GF      D  
Sbjct: 308 GCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLA 367

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E L  M      PD++ Y+TIM      G  D+  E+F+ + + G  P+  +Y+ L   
Sbjct: 368 TEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSA 427

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
                +  +A E+++ ++  G  P+ + + ++IS  C DG +D AIE+   M      PN
Sbjct: 428 LWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPN 487

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + ++  ++ G  +  +   A E+L  M   G  P ++T++LL E    +GL  EA     
Sbjct: 488 VVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEA----- 542

Query: 518 KIKNKERTNEMEAEEDIPVESLERL 542
                E  N +     I  +S  RL
Sbjct: 543 ----MELANSLHGMNAISEDSFNRL 563



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 192/409 (46%), Gaps = 37/409 (9%)

Query: 148 VINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
           ++N    +G   E++     M + G TP       LIKG+  +    ++ ++++++ R G
Sbjct: 75  LLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG 134

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
             KP++  YN L+  +     +  A  V+ +M + G  PDVVTYN +  ++   G+ D A
Sbjct: 135 --KPDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLA 192

Query: 268 EEV-----------------------------------IVEMEHNGVQPNGRTCGIIISG 292
            E+                                   + EM   G++P+  T   II G
Sbjct: 193 LEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRG 252

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
            CKE  + +A    R++   G  P+++ +N+L++  +        +++++ M      P+
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
           V+T+S ++      G +++   +   M + G+KPDA+ Y  L  G+ RE   + A E L 
Sbjct: 313 VVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLE 372

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            MI  G  P++V + TI++G C  G  D+A+EVF+K+ E G  PN+ ++ TL      + 
Sbjct: 373 YMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSG 432

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             +RA E++  +   G+ P + T+  L       G+  EA  +L  +++
Sbjct: 433 DRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQS 481



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 158/359 (44%), Gaps = 44/359 (12%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ S   RGK   A  IF  L++   +P+++TYT L+ A  +    +    ++ ++   G
Sbjct: 179 MIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKG 238

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY---------- 187
           ++PD++ +NA+I    +   +++A +    +   G  P   TYN L++            
Sbjct: 239 LEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGE 298

Query: 188 -------GIAGKP------------------EESVKLLDLMSREGNVKPNLRTYNVLVRA 222
                   I  KP                  EE+V LL  M  +G +KP+   Y+ L+  
Sbjct: 299 KLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKG-LKPDAYCYDPLIAG 357

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
           +C E  +  A   +  M + G  PD+V YNTI     + G+ADQA EV  +++  G  PN
Sbjct: 358 FCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPN 417

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVL 341
             +   + S     G    AL     +   G+ P+ + +N LI        RDG VDE +
Sbjct: 418 VSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLC----RDGMVDEAI 473

Query: 342 AL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            L   M+  R  P+V++Y+ I+         +   E+   M + G +P+   Y +L +G
Sbjct: 474 ELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEG 532



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/286 (20%), Positives = 132/286 (46%), Gaps = 6/286 (2%)

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
           N +H    S ++P++   N +         A+  +  ++  +   V         +++  
Sbjct: 25  NSLHSTIVSCIRPELNDANKVRNPQKVRVSAETRQTHVLSFDFKEVHLMK-----LLNRS 79

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           C+ GK  E+L F   M + G  P++++   LIKGF    +      V+ +++ +   PDV
Sbjct: 80  CRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERYG-KPDV 138

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
             Y+ +++ +  A  ++    + D M   G  PD   Y+I+   +    + + A E+   
Sbjct: 139 FAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLALEIFEE 198

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           +++    P V+ +T +I     DG +D A+++ D+M   G+ P+  T+  ++ G  +   
Sbjct: 199 LLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRGMCKEMM 258

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             +A E+L+ + + G  P   T+ +L     + G   E ++++S++
Sbjct: 259 VDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEM 304



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 70/158 (44%), Gaps = 37/158 (23%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIMSQVEEN 136
           +M  L   GK  +A  +F  L E G  P++ +Y TL +AL +   R+ ++  I+  + + 
Sbjct: 389 IMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQ- 447

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK--------------------------- 169
           G+DPD I +N++I+     G ++EA++    M+                           
Sbjct: 448 GIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDA 507

Query: 170 --------ESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
                   E G  P  +TY  LI+G G +G   E+++L
Sbjct: 508 IEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMEL 545


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 243/449 (54%), Gaps = 3/449 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N   + G   +A   ++ +++ G  P++VTY++++AAL   +  +    +++
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +NG+ P+   +N++++ +  SG  +EA+    KM   G+ P   TYN+L+      G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G +KP + TY  L++ +  +  + E   ++  M  +G+ P+   +
Sbjct: 319 RCTEARKMFDSMTKRG-LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  AYA+ G+ DQA  V  +M   G+ P+  T G +I   CK G++++A+R+   M +
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 312 YGVHPNLVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             + P  +++N LI     I D+ D   E++  M +  +  D I +++I+++    G + 
Sbjct: 438 ERLSPGNIVYNSLIHSLC-IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +++FD M + G+KPD   YS L  GY    + ++A +LL +M+  G  P+ V + T+I
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+C    M+ A+ +F +M   GVSP++ T+  ++ G  + R+   A+E+   +   G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + ST+ ++        LT EA R+   +
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNL 645



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 217/426 (50%), Gaps = 4/426 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAI-FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           + T L+  L    +  +A  I    + + G  P++ +Y  LL  L  + R      ++  
Sbjct: 128 AFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187

Query: 133 VEENGMD--PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + ++G D  PD + +  VIN F + G++++A  T+ +M + G+ P   TY+++I     A
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              ++++++L  M + G V PN RTYN +V  +C+     EA   + KM + G++PDVVT
Sbjct: 248 QAMDKAMEVLTSMVKNG-VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++     +NG   +A ++   M   G++P   T G ++ GY  +G + E       M 
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+HPN  +F++LI  + +    D    V + M++  +NPD +TY T++     +G ++
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                F+ M    + P    Y+ L        + +KA+EL++ M++ G   + + F +II
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C +G +  + ++FD M   GV P++ T+ TL+ GY  A +   A ++L  M + G+ 
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546

Query: 491 PQKSTF 496
           P   T+
Sbjct: 547 PDCVTY 552



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 207/412 (50%), Gaps = 5/412 (1%)

Query: 83  IERGKPQEAQAIFNNLIEGGHK---PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           + R  P  A + +N +   G     P+L TY  L+ +     R +   + +  V + G  
Sbjct: 64  VARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFR 123

Query: 140 PDSIFFNAVINAFSESGNMEEAMD-TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            D+I F  ++          +AMD    +M + G  P   +YN L+KG     + +E+++
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183

Query: 199 LLDLMSRE-GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           LL +M  + G+  P++ +Y  ++  +  E ++ +A+   H+M   G+ P+VVTY++I  A
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+A EV+  M  NGV PN RT   I+ GYC  G+ KEA+ F + M   GV P+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N L+    +        ++   M +  + P++ TY T++  ++T G + +   + D
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + GI P+ + +SIL   Y ++ + ++A  +   M + G +P+ V + T+I   C  G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            ++ A+  F++M +  +SP    + +L+       +  +A+E++  M   G+
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/463 (22%), Positives = 223/463 (48%), Gaps = 36/463 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM+ L + G+  EA+ +F+++ + G KP + TY TLL     +     +H ++ 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  NG+ P+   F+ +I A+++ G +++AM  F KM++ GL P T TY T+I     +G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 192 KPEESVKLLDLMSRE----GNVKPN----------------------------LRT--YN 217
           + E++++  + M  E    GN+  N                            L T  +N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++ + C E  + E+  +   M   G+KPD++TY+T+   Y   G+ D+A +++  M   
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G++P+  T   +I+GYCK  ++++AL   R M+  GV P+++ +N++++G  +       
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E+   + E     ++ TY+ I++        D+   +F ++    ++ +   ++I+   
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
            ++    ++A++L   +  +G  P+V  ++ +       G ++   ++F  M E+G + N
Sbjct: 664 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 723

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIM--KAFGVHPQKSTFLL 498
            +   +++    +     RA   L ++  K F +    ++  L
Sbjct: 724 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL 766



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 157/335 (46%), Gaps = 5/335 (1%)

Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V   + M+R G   V PNL TY +L+ + C    +   +  +  +   G + D + 
Sbjct: 69  PAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIA 128

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +      +     A ++++  M   G  PN  +  I++ G C E + +EAL   + M
Sbjct: 129 FTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMM 188

Query: 310 KEYG--VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            + G    P++V +  +I GF +  D D        M +  + P+V+TYS+I+ A   A 
Sbjct: 189 PDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQ 248

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            MDK  E+   M K G+ P+   Y+ +  GY    +P++A   L  M   G  P+VV + 
Sbjct: 249 AMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYN 308

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +++   C +G    A ++FD M + G+ P + T+ TL+ GY+          +L +M   
Sbjct: 309 SLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 368

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G+HP    F +L  A    G   +A  + SK++ +
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 147/301 (48%), Gaps = 1/301 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++  C        +++S  + G+  E++ +F+ ++  G KP ++TY+TL+    +  + 
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +++ +   GM PD + +N +IN + +   ME+A+  F +M+ SG++P   TYN +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++G     +   + K L +   E   +  L TYN+++   C      EA  +   +  + 
Sbjct: 591 LQGL-FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++ +  T+N +  A  + G  D+A+++   +  NG+ P+ RT  ++     ++G ++E  
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
               +M+E G   N  + N +++  ++  D       L ++ E   + +  T S  ++  
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769

Query: 364 S 364
           S
Sbjct: 770 S 770


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 230/467 (49%), Gaps = 16/467 (3%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNN------LIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           S   +++ L + G+ +EA  +F +             PSL  Y  ++  L    R +   
Sbjct: 249 SYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAV 308

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            +  ++ E  + PDS  +  +I+  +++G + +A + F K+  SG+TP+T  Y +LI G 
Sbjct: 309 QMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGL 368

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
            +A   +++ +L   M+R G   P+  TYNV++ A C    + EA +++ KM   G  PD
Sbjct: 369 CMANSFDDARELFADMNRRG-CPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPD 427

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE---------GK 298
           VVTYNT+     ++   ++A  +  EME  G  PN R+   II G C++         GK
Sbjct: 428 VVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGK 487

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           + EA R  + M + G  P++V ++ LI G   I   D    +L  M + +  P V+T +T
Sbjct: 488 LDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNT 547

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++    AG + + +E+ D M  +G  PD   Y+ L  G+ R  + E+A ELL  M+  G
Sbjct: 548 LIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARG 607

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PNVV +T ++SG C    +  A  VF +M   G +PNL T+  L+ G+  A Q     
Sbjct: 608 LAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGL 667

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
           ++   M   G+ P    +  LA     +G +  A  IL + +   R+
Sbjct: 668 KLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRS 714



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 104/451 (23%), Positives = 198/451 (43%), Gaps = 50/451 (11%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+  EA  IF+ L+E  H P    Y  L+ +L+ ++   ++  ++  + + G  PDS  F
Sbjct: 24  GRTFEAVKIFS-LMEECHSPYPDVYNVLIDSLSKRQETEAVKKMVQVMVDRGCFPDSFTF 82

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             ++    ++G M+EA     +M+   + P  +T + L     + G  E + +LL++M  
Sbjct: 83  TTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLLEIMP- 141

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA------ASG---------------- 243
                 N   YN++V A C    + +A  +   M+      A+G                
Sbjct: 142 ----VANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDSGRID 197

Query: 244 ----------MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
                      +P +VT N +   +   G+ D+A E++  M      P+  +   ++ G 
Sbjct: 198 EALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSYCTVLDGL 257

Query: 294 CKEGKIKEALR------FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---M 344
           CK G+++EA+R         +       P+L  +N++I G  +    D +DE + +   M
Sbjct: 258 CKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQ---NDRIDEAVQMFEKM 314

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            E  V+PD  +Y  +++  + AG ++  + +F  +  +G+ P   AY+ L  G       
Sbjct: 315 NERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSF 374

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           + A EL   M   G  P+ V +  +I   C  G ++ A ++  KM E G  P++ T+ T+
Sbjct: 375 DDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTV 434

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           M G  ++ +   A  +   M+  G  P + +
Sbjct: 435 MDGLCKSSRVEEALLLFNEMERLGCTPNRRS 465



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/366 (24%), Positives = 158/366 (43%), Gaps = 42/366 (11%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M + G+ P    + ++I+G+   G+  E+VK+  LM    +  P++  YNVL+ +    +
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHSPYPDV--YNVLIDSLSKRQ 58

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP------ 281
                  ++  M   G  PD  T+ TI     + G+ D+AE V+ EM    + P      
Sbjct: 59  ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118

Query: 282 -------------------------NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
                                    N     I++   CK  ++ +AL  ARTM E  +  
Sbjct: 119 FLAHELCLRGSMERAFQLLEIMPVANSSAYNIVVVALCKAARVDDALELARTMSEKRIP- 177

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
             +    L    V +MD   +DE L + +E R  P ++T + ++  + + G +DK +E+ 
Sbjct: 178 --LAAGSLDSVLVGLMDSGRIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKARELL 235

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKA------EELLMTMIESGFHPNVVIFTTII 430
             M      PD  +Y  +  G  +    E+A       EL  +   S   P++  +  +I
Sbjct: 236 RAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVI 295

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C +  +D A+++F+KM E  VSP+  ++  L+ G ++A +   A  + Q +   GV 
Sbjct: 296 LGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVT 355

Query: 491 PQKSTF 496
           P    +
Sbjct: 356 PSTVAY 361



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 3/247 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L    +  +A+ +  ++++   KP++VT  TL+  L    R      ++ 
Sbjct: 507 VVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLD 566

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G  PD + +N +++    +G  E A +    M   GL P   TY  L+ G   A 
Sbjct: 567 AMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKAN 626

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  +   M   G   PNL TY  L+  +C+   +     +  +M  +G+ PD V Y
Sbjct: 627 RLPEACGVFAQMKSSG-CAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVY 685

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQP--NGRTCGIIISGYCKEGKIKEALRFARTM 309
            T+A    ++G + +A E++ E   +              + G  + GK++ AL F R M
Sbjct: 686 GTLAAELCKSGRSARALEILREGRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDM 745

Query: 310 KEYGVHP 316
              G  P
Sbjct: 746 VRGGQLP 752



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 59/243 (24%), Positives = 109/243 (44%), Gaps = 6/243 (2%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C+ TV +   L++ L + G+ +EA+ + + ++  G  P +VTY TL+       +
Sbjct: 533 MVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQ 592

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 ++S +   G+ P+ + + A+++   ++  + EA   F +MK SG  P   TY  
Sbjct: 593 TERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTA 652

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+  AG+ +  +KL   M   G + P+   Y  L    C       A  ++ +   S
Sbjct: 653 LILGFCSAGQVDGGLKLFGEMVCAG-ISPDHVVYGTLAAELCKSGRSARALEILREGRES 711

Query: 243 GMKPDV---VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
            ++ +      Y        + G+ + A   + +M   G  P    C  +++G CK G+ 
Sbjct: 712 -LRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGGQLPAPERCASLVAGLCKSGQG 770

Query: 300 KEA 302
            EA
Sbjct: 771 GEA 773



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 27/109 (24%), Positives = 55/109 (50%), Gaps = 1/109 (0%)

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M + G  P  ++FT++I GWC+ G    A+++F  M E   SP    +  L+   S+ ++
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLM-EECHSPYPDVYNVLIDSLSKRQE 59

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
               ++++Q+M   G  P   TF  +       G   EA+ ++ +++++
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSR 108


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 243/449 (54%), Gaps = 3/449 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N   + G   +A   ++ +++ G  P++VTY++++AAL   +  +    +++
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +NG+ P+   +N++++ +  SG  +EA+    KM   G+ P   TYN+L+      G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G +KP + TY  L++ +  +  + E   ++  M  +G+ P+   +
Sbjct: 319 RCTEARKMFDSMTKRG-LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  AYA+ G+ DQA  V  +M   G+ P+  T G +I   CK G++++A+R+   M +
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 312 YGVHPNLVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             + P  +++N LI     I D+ D   E++  M +  +  D I +++I+++    G + 
Sbjct: 438 ERLSPGNIVYNSLIHSLC-IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +++FD M + G+KPD   YS L  GY    + ++A +LL +M+  G  P+ V + T+I
Sbjct: 497 ESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+C    M+ A+ +F +M   GVSP++ T+  ++ G  + R+   A+E+   +   G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + ST+ ++        LT EA R+   +
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNL 645



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 118/426 (27%), Positives = 217/426 (50%), Gaps = 4/426 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAI-FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           + T L+  L    +  +A  I    + + G  P++ +Y  LL  L  + R      ++  
Sbjct: 128 AFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187

Query: 133 VEENGMD--PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + ++G D  PD + +  VIN F + G++++A  T+ +M + G+ P   TY+++I     A
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              ++++++L  M + G V PN RTYN +V  +C+     EA   + KM + G++PDVVT
Sbjct: 248 QAMDKAMEVLTSMVKNG-VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++     +NG   +A ++   M   G++P   T G ++ GY  +G + E       M 
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+HPN  +F++LI  + +    D    V + M++  +NPD +TY T++     +G ++
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                F+ M    + P    Y+ L        + +KA+EL++ M++ G   + + F +II
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C +G +  + ++FD M   GV P++ T+ TL+ GY  A +   A ++L  M + G+ 
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546

Query: 491 PQKSTF 496
           P   T+
Sbjct: 547 PDCVTY 552



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 207/412 (50%), Gaps = 5/412 (1%)

Query: 83  IERGKPQEAQAIFNNLIEGGHK---PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           + R  P  A + +N +   G     P+L TY  L+ +     R +   + +  V + G  
Sbjct: 64  VARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFR 123

Query: 140 PDSIFFNAVINAFSESGNMEEAMD-TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            D+I F  ++          +AMD    +M + G  P   +YN L+KG     + +E+++
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183

Query: 199 LLDLMSRE-GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           LL +M  + G+  P++ +Y  ++  +  E ++ +A+   H+M   G+ P+VVTY++I  A
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+A EV+  M  NGV PN RT   I+ GYC  G+ KEA+ F + M   GV P+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N L+    +        ++   M +  + P++ TY T++  ++T G + +   + D
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + GI P+ + +SIL   Y ++ + ++A  +   M + G +P+ V + T+I   C  G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            ++ A+  F++M +  +SP    + +L+       +  +A+E++  M   G+
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/463 (22%), Positives = 223/463 (48%), Gaps = 36/463 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM+ L + G+  EA+ +F+++ + G KP + TY TLL     +     +H ++ 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  NG+ P+   F+ +I A+++ G +++AM  F KM++ GL P T TY T+I     +G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 192 KPEESVKLLDLMSRE----GNVKPN----------------------------LRT--YN 217
           + E++++  + M  E    GN+  N                            L T  +N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++ + C E  + E+  +   M   G+KPD++TY+T+   Y   G+ D+A +++  M   
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G++P+  T   +I+GYCK  ++++AL   R M+  GV P+++ +N++++G  +       
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E+   + E     ++ TY+ I++        D+   +F ++    ++ +   ++I+   
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
            ++    ++A++L   +  +G  P+V  ++ +       G ++   ++F  M E+G + N
Sbjct: 664 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 723

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIM--KAFGVHPQKSTFLL 498
            +   +++    +     RA   L ++  K F +    ++  L
Sbjct: 724 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL 766



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 157/335 (46%), Gaps = 5/335 (1%)

Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V   + M+R G   V PNL TY +L+ + C    +   +  +  +   G + D + 
Sbjct: 69  PAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIA 128

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +      +     A ++++  M   G  PN  +  I++ G C E + +EAL   + M
Sbjct: 129 FTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMM 188

Query: 310 KEYG--VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            + G    P++V +  +I GF +  D D        M +  + P+V+TYS+I+ A   A 
Sbjct: 189 PDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQ 248

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            MDK  E+   M K G+ P+   Y+ +  GY    +P++A   L  M   G  P+VV + 
Sbjct: 249 AMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYN 308

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +++   C +G    A ++FD M + G+ P + T+ TL+ GY+          +L +M   
Sbjct: 309 SLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 368

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G+HP    F +L  A    G   +A  + SK++ +
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 65/305 (21%), Positives = 148/305 (48%), Gaps = 1/305 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++  C        +++S  + G+  E++ +F+ ++  G KP ++TY+TL+    +  + 
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 530

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +++ +   GM PD + +N +IN + +   ME+A+  F +M+ SG++P   TYN +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++G     +   + K L +   E   +  L TYN+++   C      EA  +   +  + 
Sbjct: 591 LQGL-FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++ +  T+N +  A  + G  D+A+++   +  NG+ P+ RT  ++     ++G ++E  
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
               +M+E G   N  + N +++  ++  D       L ++ E   + +  T S  ++  
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769

Query: 364 STAGF 368
           S   +
Sbjct: 770 SGGKY 774


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 241/449 (53%), Gaps = 1/449 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++  I+ G  +EA  I + +I  G K ++VTY  ++  +          S+ +++
Sbjct: 348 TYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEM 407

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G++PD+  +N +I+ + +S +M +A +   +MK   LTP+  TY+ LI G   +   
Sbjct: 408 LMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDL 467

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +++ ++LD M R G VKPN+  Y  L++A+  E     A  ++  M A+G+ PD+  YN 
Sbjct: 468 QKANEVLDQMIRNG-VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     +  + ++A+ ++V+M   G++PN  T G  I+ Y K G+I+ A R+ + M   G
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + PN VI+ +LIKG  ++ +          M E  + PD+  YS I+++ S  G   +  
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F    K G+ PD   Y+ L  G+ +E + EKA +L   M+ +G +PN+V++ T+I+G 
Sbjct: 647 GVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGL 706

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G + +A E+FD++ E  + P++ T+ T++ GY ++     A ++   M + G+ P  
Sbjct: 707 CKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDG 766

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK 522
             + +L +     G  ++A  +  + + K
Sbjct: 767 YIYCILIDGCGKEGNLEKALSLFHEAQQK 795



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 230/491 (46%), Gaps = 39/491 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L      Q+A  + + +I  G KP++  Y TL+ A   + R+     ++  +  NG
Sbjct: 457 LISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANG 516

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N +I     +  +EEA      M E G+ P   TY   I  Y  +G+ + + 
Sbjct: 517 VLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAE 576

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +    M   G V PN   Y +L++  C+  N  EA +    M   G+ PD+  Y+ I  +
Sbjct: 577 RYFKDMLSSGIV-PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHS 635

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            ++NG+  +A  V ++    GV P+      +ISG+CKEG I++A +    M   G++PN
Sbjct: 636 LSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPN 695

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V++N LI G  ++ +     E+   ++E  + PDV+TYSTI++ +  +G + +  ++FD
Sbjct: 696 IVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFD 755

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKA------------------------------ 407
           +M   GI PD + Y IL  G  +E   EKA                              
Sbjct: 756 EMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGK 815

Query: 408 ----EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
                EL   M++    PN+V +T +I  +     M+ A ++F  M    + PN  T+ +
Sbjct: 816 VIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTS 875

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           L+  Y++    ++   + + M+A G+      + ++A A    G + EA ++L    NK 
Sbjct: 876 LLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLL----NKS 931

Query: 524 RTNEMEAEEDI 534
               ++ E+D+
Sbjct: 932 LVEGIKLEDDV 942



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 200/427 (46%), Gaps = 2/427 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   EA ++F   I  G  P+L+    L+  L           +   + E  + PD   +
Sbjct: 186 GFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTY 245

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             VI A  + G++ +      +M E    P   TYN  I G    G  +E++++  LM  
Sbjct: 246 TNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMME 304

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G + P+  TY +LV  +C +K   EA  +   M +SG+ P+  TY  +   + + G  +
Sbjct: 305 KG-LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIE 363

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  +  EM   G++ N  T   +I G  K G++ +A+     M   G+ P+   +NLLI
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLI 423

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G+++  D     E+LA MK  ++ P   TYS +++    +  + K  E+ D M + G+K
Sbjct: 424 DGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVK 483

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P+   Y  L K YV+E   E A ELL  MI +G  P++  +  +I G C    ++ A  +
Sbjct: 484 PNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKML 543

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
              M E G+ PN  T+   +  YS++ +   AE   + M + G+ P    + +L +    
Sbjct: 544 LVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCD 603

Query: 506 TGLTKEA 512
            G T EA
Sbjct: 604 VGNTVEA 610



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 210/448 (46%), Gaps = 35/448 (7%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
             +N   + G+ Q A+  F +++  G  P+ V YT L+             S    + E G
Sbjct: 562  FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            + PD   ++A+I++ S++G  +EAM  F K  ++G+ P    YN+LI G+   G  E++ 
Sbjct: 622  LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L D M   G + PN+  YN L+   C    +T+A  +  ++    + PDVVTY+TI   
Sbjct: 682  QLYDEMLHNG-INPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDG 740

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG------------------------- 292
            Y ++G   +A ++  EM   G+ P+G    I+I G                         
Sbjct: 741  YCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSL 800

Query: 293  ---------YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
                     +CK GK+ EA      M +  + PN+V + +LI  + +    +  +++   
Sbjct: 801  SAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLD 860

Query: 344  MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
            M+   + P+ +TY++++ +++  G   K   +F DM   GI  DA AY ++A  Y +E +
Sbjct: 861  METRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGK 920

Query: 404  PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
              +A +LL   +  G      +F  +I   C +  +   +E+  +M +  +S + KT  T
Sbjct: 921  SLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNT 980

Query: 464  LMWGYSEARQPWRAEEILQIMKAFGVHP 491
            L+ G+ ++     A ++L +M+  G  P
Sbjct: 981  LLLGFYKSGNEDEASKVLGVMQRLGWVP 1008



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 203/457 (44%), Gaps = 37/457 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+     LM  L++         ++ +++E    P + TYT ++ A            ++
Sbjct: 206 TLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVL 265

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S++E+    P+   +NA I    ++G ++EA++    M E GL P   TY  L+ G+   
Sbjct: 266 SEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQ 324

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + +E+  + + M   G + PN  TY  L+  +  E NI EA  +  +M   G+K +VVT
Sbjct: 325 KRSKEAKLIFESMPSSG-LNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVT 383

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +    A+ GE  +A  +  EM   G++P+  T  ++I GY K   + +A      MK
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMK 443

Query: 311 -----------------------------------EYGVHPNLVIFNLLIKGFVEIMDRD 335
                                                GV PN+ ++  LIK +V+    +
Sbjct: 444 ARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYE 503

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
              E+L +M    V PD+  Y+ ++     A  +++ K +  DMG+ GIKP+AH Y    
Sbjct: 504 MAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFI 563

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
             Y +  E + AE     M+ SG  PN VI+T +I G C  G+   A+  F  M E G+ 
Sbjct: 564 NLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLI 623

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           P+++ +  ++   S+  +   A  +       GV P 
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPD 660



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 203/422 (48%), Gaps = 8/422 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L    K +EA+ +  ++ E G KP+  TY   +   +              +  +G
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+++ +  +I    + GN  EA+ TF  M E GL P    Y+ +I      GK +E++
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +     + G V P++  YN L+  +C E +I +A  +  +M  +G+ P++V YNT+   
Sbjct: 647 GVFLKFLKTG-VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLING 705

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + GE  +A E+  E+E   + P+  T   II GYCK G + EA +    M   G+ P+
Sbjct: 706 LCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPD 765

Query: 318 LVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVNP--DVITYSTIMNAWSTAGFMDKCKE 374
             I+ +LI G      ++G +++ L+L  E +      +  ++++++++   G + + +E
Sbjct: 766 GYIYCILIDG----CGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARE 821

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +FDDM    + P+   Y+IL   Y + +  E+AE+L + M      PN + +T+++  + 
Sbjct: 822 LFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYN 881

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G+  + I +F  M   G++ +   +  +   Y +  +   A ++L      G+  +  
Sbjct: 882 QIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDD 941

Query: 495 TF 496
            F
Sbjct: 942 VF 943



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/331 (21%), Positives = 155/331 (46%), Gaps = 20/331 (6%)

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA-------- 264
           L +Y++L    CN   I +A N++ K+  +  KP +   +++   Y + G +        
Sbjct: 120 LHSYSILAIRLCNSGLIHQADNMLEKLLQT-RKPPLEILDSLVRCYREFGGSNLTVFDIF 178

Query: 265 ----------DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                     ++A  V +     G  P    C  ++    K   +    +   +M E  +
Sbjct: 179 IDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKI 238

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P++  +  +IK   ++ D      VL+ M++    P++ TY+  +      G +D+  E
Sbjct: 239 VPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALE 297

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +   M + G+ PD H Y++L  G+ +++  ++A+ +  +M  SG +PN   +T +I G+ 
Sbjct: 298 VKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFI 357

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +G+++ A+ + D+M   G+  N+ T+  ++ G ++A +  +A  +   M   G+ P   
Sbjct: 358 KEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTW 417

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNKERT 525
           T+ LL +    +    +A  +L+++K ++ T
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEMKARKLT 448



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 107/216 (49%), Gaps = 1/216 (0%)

Query: 66   KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
            ++S  ++ +   L++S  + GK  EA+ +F+++++    P++VTYT L+ A    +    
Sbjct: 794  QKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEE 853

Query: 126  IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
               +   +E   + P+++ + +++ ++++ GN  + +  F  M+  G+      Y  +  
Sbjct: 854  AEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMAS 913

Query: 186  GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
             Y   GK  E++KLL+    EG +K     ++ L+   C EK I+    ++ +M    + 
Sbjct: 914  AYCKEGKSLEALKLLNKSLVEG-IKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELS 972

Query: 246  PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
                T NT+   + ++G  D+A +V+  M+  G  P
Sbjct: 973  LSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 1008


>gi|295830911|gb|ADG39124.1| AT5G21222-like protein [Capsella grandiflora]
          Length = 166

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 105/166 (63%), Positives = 138/166 (83%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           LIE GHKPS++TYTTL+ ALT QK F+S+ S++S+VE+NG+ PD+I FNA+INA SESGN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           +++AM  F KMKESG  PTTST+NTLIKGYG  GK EES +LL+LM R+  ++PN RT N
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
           +LV+AWCN++ I EAWN+++KM + G+KPDVVT+NT+A AYA+ GE
Sbjct: 121 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIGE 166



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 87/165 (52%), Gaps = 6/165 (3%)

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR--EGNVKPNLRTYNVLVRAWCNEK 227
           E G  P+  TY TL+       + +    LL L+S+  +  +KP+   +N ++ A     
Sbjct: 3   EEGHKPSIITYTTLVTALT---RQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESG 59

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI-VEMEHNGVQPNGRTC 286
           N+ +A  +  KM  SG KP   T+NT+   Y + G+ +++  ++ + +    +QPN RTC
Sbjct: 60  NLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTC 119

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            I++  +C + KI+EA      M+ YGV P++V FN L + +  I
Sbjct: 120 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARI 164



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 89/159 (55%), Gaps = 1/159 (0%)

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           KP++ TY  LV A   +K+     +++ K+  +G+KPD + +N I  A +++G  DQA +
Sbjct: 7   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 66

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGF 328
           +  +M+ +G +P   T   +I GY K GK++E+ R    M ++  + PN    N+L++ +
Sbjct: 67  IFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 126

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
                 +    ++  M+ + V PDV+T++T+  A++  G
Sbjct: 127 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIG 165



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 1/159 (0%)

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G KP ++TY T+ TA  +         +I ++E NG++P+      II+   + G + +A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM-KEFRVNPDVITYSTIMN 361
           ++    MKE G  P    FN LIKG+ +I   +    +L LM ++  + P+  T + ++ 
Sbjct: 65  MKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQ 124

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           AW     +++   I   M   G+KPD   ++ LA+ Y R
Sbjct: 125 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYAR 163



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 1/160 (0%)

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G  P+++ +  L+           +  +++ +++  + PD I ++ I+NA S +G +D
Sbjct: 3   EEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLD 62

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI-ESGFHPNVVIFTTI 429
           +  +IF+ M ++G KP    ++ L KGY +  + E++  LL  M+ +    PN      +
Sbjct: 63  QAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNIL 122

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +  WC+   ++ A  +  KM  +GV P++ TF TL   Y+
Sbjct: 123 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYA 162



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 1/158 (0%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P +ITY+T++ A +          +   + K G+KPD   ++ +          ++A ++
Sbjct: 8   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 67

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYS 469
              M ESG  P    F T+I G+   G ++ +  + + M  +  + PN +T   L+  + 
Sbjct: 68  FEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWC 127

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
             R+   A  I+  M+++GV P   TF  LA A    G
Sbjct: 128 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIG 165



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 1/121 (0%)

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G KP    Y+ L     R++       L+  + ++G  P+ ++F  II+     G++D+A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM-KAFGVHPQKSTFLLLAE 501
           +++F+KM E G  P   TF TL+ GY +  +   +  +L++M +   + P   T  +L +
Sbjct: 65  MKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQ 124

Query: 502 A 502
           A
Sbjct: 125 A 125



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%)

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           +IE G  P+++ +TT+++           + +  K+ ++G+ P+   F  ++   SE+  
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
             +A +I + MK  G  P  STF  L +     G  +E+ R+L
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLL 103


>gi|295830915|gb|ADG39126.1| AT5G21222-like protein [Capsella grandiflora]
          Length = 166

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 105/166 (63%), Positives = 138/166 (83%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           LIE GHKPS++TYTTL+ ALT QK F+S+ S++S+VE+NG+ PD+I FNA+INA SESGN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           +++AM  F KMKESG  PTTST+NTLIKGYG  GK EES +LL+LM R+  ++PN RT N
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
           +LV+AWCN++ I EAWN+++KM + G+KPDVVT+NT+A AYA+ GE
Sbjct: 121 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGE 166



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 6/165 (3%)

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR--EGNVKPNLRTYNVLVRAWCNEK 227
           E G  P+  TY TL+       + +    LL L+S+  +  +KP+   +N ++ A     
Sbjct: 3   EEGHKPSIITYTTLVTALT---RQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESG 59

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI-VEMEHNGVQPNGRTC 286
           N+ +A  +  KM  SG KP   T+NT+   Y + G+ +++  ++ + +    +QPN RTC
Sbjct: 60  NLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTC 119

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            I++  +C + KI+EA      M+ YGV P++V FN L K +  I
Sbjct: 120 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI 164



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 89/159 (55%), Gaps = 1/159 (0%)

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           KP++ TY  LV A   +K+     +++ K+  +G+KPD + +N I  A +++G  DQA +
Sbjct: 7   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 66

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGF 328
           +  +M+ +G +P   T   +I GY K GK++E+ R    M ++  + PN    N+L++ +
Sbjct: 67  IFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 126

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
                 +    ++  M+ + V PDV+T++T+  A++  G
Sbjct: 127 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 165



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/159 (29%), Positives = 80/159 (50%), Gaps = 1/159 (0%)

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G KP ++TY T+ TA  +         +I ++E NG++P+      II+   + G + +A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM-KEFRVNPDVITYSTIMN 361
           ++    MKE G  P    FN LIKG+ +I   +    +L LM ++  + P+  T + ++ 
Sbjct: 65  MKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQ 124

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           AW     +++   I   M   G+KPD   ++ LAK Y R
Sbjct: 125 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR 163



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 1/160 (0%)

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G  P+++ +  L+           +  +++ +++  + PD I ++ I+NA S +G +D
Sbjct: 3   EEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLD 62

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI-ESGFHPNVVIFTTI 429
           +  +IF+ M ++G KP    ++ L KGY +  + E++  LL  M+ +    PN      +
Sbjct: 63  QAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNIL 122

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +  WC+   ++ A  +  KM  +GV P++ TF TL   Y+
Sbjct: 123 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYA 162



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 1/158 (0%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P +ITY+T++ A +          +   + K G+KPD   ++ +          ++A ++
Sbjct: 8   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 67

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYS 469
              M ESG  P    F T+I G+   G ++ +  + + M  +  + PN +T   L+  + 
Sbjct: 68  FEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWC 127

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
             R+   A  I+  M+++GV P   TF  LA+A    G
Sbjct: 128 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 165



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 1/121 (0%)

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G KP    Y+ L     R++       L+  + ++G  P+ ++F  II+     G++D+A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM-KAFGVHPQKSTFLLLAE 501
           +++F+KM E G  P   TF TL+ GY +  +   +  +L++M +   + P   T  +L +
Sbjct: 65  MKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQ 124

Query: 502 A 502
           A
Sbjct: 125 A 125



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%)

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           +IE G  P+++ +TT+++           + +  K+ ++G+ P+   F  ++   SE+  
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
             +A +I + MK  G  P  STF  L +     G  +E+ R+L
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLL 103


>gi|295830917|gb|ADG39127.1| AT5G21222-like protein [Capsella grandiflora]
          Length = 166

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 105/166 (63%), Positives = 138/166 (83%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           LIE GHKPS++TYTTL+ ALT QK F+S+ S++S+VE+NG+ PD+I FNA+INA SESGN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           +++AM  F KMKESG  PTTST+NTLIKGYG  GK EES +LL+LM R+  ++PN RT N
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
           +LV+AWCN++ I EAWN+++KM + G+KPDVVT+NT+A AYA+ GE
Sbjct: 121 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIGE 166



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 6/165 (3%)

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR--EGNVKPNLRTYNVLVRAWCNEK 227
           E G  P+  TY TL+       + +    LL L+S+  +  +KP+   +N ++ A     
Sbjct: 3   EEGHKPSIITYTTLVTALT---RQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESG 59

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI-VEMEHNGVQPNGRTC 286
           N+ +A  +  KM  SG KP   T+NT+   Y + G+ +++  ++ + +    +QPN RTC
Sbjct: 60  NLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTC 119

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            I++  +C + KI+EA      M+ YGV P++V FN L   +  I
Sbjct: 120 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARI 164



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 89/159 (55%), Gaps = 1/159 (0%)

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           KP++ TY  LV A   +K+     +++ K+  +G+KPD + +N I  A +++G  DQA +
Sbjct: 7   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 66

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGF 328
           +  +M+ +G +P   T   +I GY K GK++E+ R    M ++  + PN    N+L++ +
Sbjct: 67  IFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 126

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
                 +    ++  M+ + V PDV+T++T+  A++  G
Sbjct: 127 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIG 165



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 79/159 (49%), Gaps = 1/159 (0%)

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G KP ++TY T+ TA  +         +I ++E NG++P+      II+   + G + +A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM-KEFRVNPDVITYSTIMN 361
           ++    MKE G  P    FN LIKG+ +I   +    +L LM ++  + P+  T + ++ 
Sbjct: 65  MKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQ 124

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           AW     +++   I   M   G+KPD   ++ LA  Y R
Sbjct: 125 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYAR 163



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 1/160 (0%)

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G  P+++ +  L+           +  +++ +++  + PD I ++ I+NA S +G +D
Sbjct: 3   EEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLD 62

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI-ESGFHPNVVIFTTI 429
           +  +IF+ M ++G KP    ++ L KGY +  + E++  LL  M+ +    PN      +
Sbjct: 63  QAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNIL 122

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +  WC+   ++ A  +  KM  +GV P++ TF TL   Y+
Sbjct: 123 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYA 162



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 1/158 (0%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P +ITY+T++ A +          +   + K G+KPD   ++ +          ++A ++
Sbjct: 8   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 67

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYS 469
              M ESG  P    F T+I G+   G ++ +  + + M  +  + PN +T   L+  + 
Sbjct: 68  FEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWC 127

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
             R+   A  I+  M+++GV P   TF  LA A    G
Sbjct: 128 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIG 165



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 1/140 (0%)

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G KP    Y+ L     R++       L+  + ++G  P+ ++F  II+     G++D+A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM-KAFGVHPQKSTFLLLAE 501
           +++F+KM E G  P   TF TL+ GY +  +   +  +L++M +   + P   T  +L +
Sbjct: 65  MKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQ 124

Query: 502 ARRATGLTKEAKRILSKIKN 521
           A       +EA  I+ K+++
Sbjct: 125 AWCNQRKIEEAWNIVYKMQS 144



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%)

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           +IE G  P+++ +TT+++           + +  K+ ++G+ P+   F  ++   SE+  
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
             +A +I + MK  G  P  STF  L +     G  +E+ R+L
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLL 103


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 231/459 (50%), Gaps = 4/459 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L + GK  +A  +   L + G  P ++TY  L++      +   I S +  +
Sbjct: 147 ACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYC---KTGEIGSALQLL 203

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +   + PD + +N ++    +SG ++EAM+   +  +    P   TY  LI+        
Sbjct: 204 DRMSVSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGV 263

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            +++KLLD M R+   KP++ TYNVL+   C E  + EA   ++ M + G +P+V+T+N 
Sbjct: 264 GQAMKLLDEM-RDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNI 322

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           I  +    G    AE+ + EM   G  P+  T  I+I+  C++G I  A+     M ++G
Sbjct: 323 ILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHG 382

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             PN + +N L+    +    +   E L +M      PD++TY+T++ A    G +D   
Sbjct: 383 CTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 442

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           EI + +G  G  P    Y+ +  G  +  + + A +LL  M   G  P+++ ++T++ G 
Sbjct: 443 EILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGL 502

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
             +G +D AI  F  + E GV PN  T+ ++M G  +ARQ  RA + L  M A G  P +
Sbjct: 503 SREGKVDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTE 562

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
           +++++L E     GL KEA  +L+++ ++    +  AE+
Sbjct: 563 TSYMILIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQ 601



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/374 (29%), Positives = 197/374 (52%), Gaps = 9/374 (2%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD I   ++I    ++G   +A      +++SG  P   TYN LI GY   G+   +++L
Sbjct: 143 PDIIACTSLIRGLCKTGKTWKATRVMEILEDSGAVPDVITYNVLISGYCKTGEIGSALQL 202

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           LD MS    V P++ TYN ++R  C+   + EA  V+ +       PDV+TY  +  A  
Sbjct: 203 LDRMS----VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATC 258

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +     QA +++ EM   G +P+  T  ++I+G CKEG++ EA+RF   M  YG  PN++
Sbjct: 259 KESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVI 318

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
             N++++           ++ LA M     +P V+T++ ++N     G + +  ++ + M
Sbjct: 319 THNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKM 378

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            + G  P++ +Y+ L     ++++ E+A E L  M+  G +P++V + T+++  C DG +
Sbjct: 379 PQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 438

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D A+E+ +++   G SP L T+ T++ G S+  +   A ++L  MK  G+ P   T+  L
Sbjct: 439 DVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTL 498

Query: 500 AEARRATGLTKEAK 513
                  GL++E K
Sbjct: 499 -----VGGLSREGK 507



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 167/334 (50%), Gaps = 2/334 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  + C+  V +   L+N + + G+  EA    N++   G +P+++T+  +L ++    R
Sbjct: 273 MRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGR 332

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +      ++++   G  P  + FN +IN     G +  A+D   KM + G TP + +YN 
Sbjct: 333 WMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNP 392

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+       K E +++ LD+M   G   P++ TYN L+ A C +  +  A  +++++ + 
Sbjct: 393 LLHALCKDKKMERAIEYLDIMVSRG-CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSK 451

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P ++TYNT+    ++ G+ D A +++ EM+  G++P+  T   ++ G  +EGK+ EA
Sbjct: 452 GCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEA 511

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           + F   ++E GV PN + +N ++ G  +        + LA M      P   +Y  ++  
Sbjct: 512 IAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEG 571

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            +  G   +  E+ +++   G+   + A  ++ K
Sbjct: 572 LAYEGLAKEALELLNELCSRGVVKKSSAEQVVVK 605



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 173/359 (48%), Gaps = 9/359 (2%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M +E    V + T L+ +  +     +A  + + + + G KP +VTY  L+  +  + R 
Sbjct: 239 MQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKEGRL 298

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +     ++ +   G  P+ I  N ++ +   +G   +A     +M   G +P+  T+N L
Sbjct: 299 DEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTFNIL 358

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I      G    ++ +L+ M + G   PN  +YN L+ A C +K +  A   +  M + G
Sbjct: 359 INFLCRKGLIGRAIDVLEKMPQHG-CTPNSLSYNPLLHALCKDKKMERAIEYLDIMVSRG 417

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             PD+VTYNT+ TA  ++G+ D A E++ ++   G  P   T   +I G  K GK  +A+
Sbjct: 418 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDDAI 477

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLAL---MKEFRVNPDVITYSTI 359
           +    MK  G+ P+++ ++ L+ G    + R+G VDE +A    ++E  V P+ ITY++I
Sbjct: 478 KLLDEMKGKGLKPDIITYSTLVGG----LSREGKVDEAIAFFHDLEEMGVKPNAITYNSI 533

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           M     A    +  +    M   G KP   +Y IL +G   E   ++A ELL  +   G
Sbjct: 534 MLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRG 592



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 154/338 (45%), Gaps = 38/338 (11%)

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +R       + E +  +  M   G  PD++   ++     + G+  +A  V+  +E +G 
Sbjct: 117 LRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVMEILEDSGA 176

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------VE 330
            P+  T  ++ISGYCK G+I  AL+    M    V P++V +N +++           +E
Sbjct: 177 VPDVITYNVLISGYCKTGEIGSALQLLDRMS---VSPDVVTYNTILRTLCDSGKLKEAME 233

Query: 331 IMDR-----------------------DGVDEVLALMKEFR---VNPDVITYSTIMNAWS 364
           ++DR                        GV + + L+ E R     PDV+TY+ ++N   
Sbjct: 234 VLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGIC 293

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G +D+     + M   G +P+   ++I+ +          AE+ L  MI  G  P+VV
Sbjct: 294 KEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVV 353

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            F  +I+  C  G + RAI+V +KM +HG +PN  ++  L+    + ++  RA E L IM
Sbjct: 354 TFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIM 413

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            + G +P   T+  L  A    G    A  IL+++ +K
Sbjct: 414 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSK 451


>gi|295830909|gb|ADG39123.1| AT5G21222-like protein [Capsella grandiflora]
 gi|295830919|gb|ADG39128.1| AT5G21222-like protein [Capsella grandiflora]
          Length = 166

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 105/166 (63%), Positives = 138/166 (83%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           LIE GHKPS++TYTTL+ ALT QK F+S+ S++S+VE+NG+ PD+I FNA+INA SESGN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           +++AM  F KMKESG  PTTST+NTLIKGYG  GK EES +LL+LM R+  ++PN RT N
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
           +LV+AWCN++ I EAWN+++KM + G+KPDVVT+NT+A AYA+ GE
Sbjct: 121 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIGE 166



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 86/165 (52%), Gaps = 6/165 (3%)

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR--EGNVKPNLRTYNVLVRAWCNEK 227
           E G  P+  TY TL+       + +    LL L+S+  +  +KP+   +N ++ A     
Sbjct: 3   EEGHKPSIITYTTLVTALT---RQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESG 59

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI-VEMEHNGVQPNGRTC 286
           N+ +A  +  KM  SG KP   T+NT+   Y + G+ +++  ++ + +    +QPN RTC
Sbjct: 60  NLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTC 119

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            I++  +C + KI+EA      M+ YGV P++V FN L   +  I
Sbjct: 120 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARI 164



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 89/159 (55%), Gaps = 1/159 (0%)

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           KP++ TY  LV A   +K+     +++ K+  +G+KPD + +N I  A +++G  DQA +
Sbjct: 7   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 66

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGF 328
           +  +M+ +G +P   T   +I GY K GK++E+ R    M ++  + PN    N+L++ +
Sbjct: 67  IFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 126

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
                 +    ++  M+ + V PDV+T++T+  A++  G
Sbjct: 127 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIG 165



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 79/159 (49%), Gaps = 1/159 (0%)

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G KP ++TY T+ TA  +         +I ++E NG++P+      II+   + G + +A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM-KEFRVNPDVITYSTIMN 361
           ++    MKE G  P    FN LIKG+ +J   +    +L LM ++  + P+  T + ++ 
Sbjct: 65  MKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNILVQ 124

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           AW     +++   I   M   G+KPD   ++ LA  Y R
Sbjct: 125 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYAR 163



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 1/160 (0%)

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G  P+++ +  L+           +  +++ +++  + PD I ++ I+NA S +G +D
Sbjct: 3   EEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLD 62

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI-ESGFHPNVVIFTTI 429
           +  +IF+ M ++G KP    ++ L KGY +  + E++  LL  M+ +    PN      +
Sbjct: 63  QAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNIL 122

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +  WC+   ++ A  +  KM  +GV P++ TF TL   Y+
Sbjct: 123 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYA 162



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 1/158 (0%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P +ITY+T++ A +          +   + K G+KPD   ++ +          ++A ++
Sbjct: 8   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 67

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYS 469
              M ESG  P    F T+I G+   G ++ +  + + M  +  + PN +T   L+  + 
Sbjct: 68  FEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWC 127

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
             R+   A  I+  M+++GV P   TF  LA A    G
Sbjct: 128 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAXAYARIG 165



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 71/140 (50%), Gaps = 1/140 (0%)

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G KP    Y+ L     R++       L+  + ++G  P+ ++F  II+     G++D+A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM-KAFGVHPQKSTFLLLAE 501
           +++F+KM E G  P   TF TL+ GY +  +   +  +L++M +   + P   T  +L +
Sbjct: 65  MKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNILVQ 124

Query: 502 ARRATGLTKEAKRILSKIKN 521
           A       +EA  I+ K+++
Sbjct: 125 AWCNQRKIEEAWNIVYKMQS 144



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%)

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           +IE G  P+++ +TT+++           + +  K+ ++G+ P+   F  ++   SE+  
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
             +A +I + MK  G  P  STF  L +     G  +E+ R+L
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLL 103


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 218/397 (54%), Gaps = 4/397 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV + T  + +L + G+ ++A  IF ++ + G KP++ TYT+L++   + +    +   M
Sbjct: 332 TVHTFTAPIVALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRM 391

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S+   +G+ P+++ +NA++N   E+  ++ A+  F  M + G  P TS+YN LI+GY   
Sbjct: 392 SR---DGVVPNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTI 448

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E+++ +L  M + G   P L TYN++++ +C+  +   A  V+  M A+G +PD  +
Sbjct: 449 GDTEKAMSMLTNMLK-GRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWS 507

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  + + + +  + + A  +  EM   G+ PN  T   +ISGYCK+ K+  A R    MK
Sbjct: 508 YTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMK 567

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PN+  +N+LI G  +  +  G +E+  +M E +++PDV+TYST++N     G + 
Sbjct: 568 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIP 627

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              E+F+ M K G  P+ H YS L +   +E   E+AEE+   + + G  P+ V +  +I
Sbjct: 628 LALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMI 687

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
                 G +DRA +   +M   G  P L+T++ L+ G
Sbjct: 688 EVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKG 724



 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 150/574 (26%), Positives = 272/574 (47%), Gaps = 51/574 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N+L + G  ++A++I N + + G KP   TYT+++      +  +S   I ++++E G
Sbjct: 234 VINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEG 293

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            +P++  ++ +IN    SG + EA+D   +M   G+ PT  T+   I      G+ E++ 
Sbjct: 294 CEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAW 353

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+   M ++G  KPN+ TY  L+     ++    A  + H+M+  G+ P+ VTYN +   
Sbjct: 354 KIFIDMKKKG-CKPNVYTYTSLISG---QRVSRMAIGLFHRMSRDGVVPNTVTYNALMNV 409

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPN-----------------------------GR---- 284
             +N E D A  V   M  +G  PN                             GR    
Sbjct: 410 LMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRPTPT 469

Query: 285 --TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T  III GYC  G    A+R    MK  G  P+   +  LI GF +I   +    +  
Sbjct: 470 LVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASGMFN 529

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M +  + P+ +TY+ +++ +     +D    + + M ++G +P+   Y++L  G  ++ 
Sbjct: 530 EMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQN 589

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
               AEEL   M+E    P+VV ++T+I+G C++G++  A+E+F+KM +HG  PNL T+ 
Sbjct: 590 NFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYS 649

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +L+    +  +   AEE+   +K  G+ P + T++ + E    +G    A   L ++ N 
Sbjct: 650 SLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINA 709

Query: 523 ERTNEMEAEEDIPVESL--ERLYHK------EATTASYPNLLQIPNVVSS-DQKGSAAAL 573
                ++   D+ ++ L  E +YHK       A+T+++ + +   +V+S    K +    
Sbjct: 710 GCQPTLQT-YDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSSKLAELDF 768

Query: 574 KKGRMLLRDADSSLECS--WFATTSMYLSHSCKS 605
           +  R L     S L  S  WF   ++Y S   +S
Sbjct: 769 ELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQS 802



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 181/405 (44%), Gaps = 33/405 (8%)

Query: 148 VINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
           +I + S    M +A++      + G      TY TL+            +     + REG
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILREG 223

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
            ++PNL  YN ++ A C + N+ +A ++++K+  SGMKPD  TY ++   Y +N + D A
Sbjct: 224 -LQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSA 282

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
            E+   M+  G +PN  T   +I+G C  G++ EAL F   M  +GV P +  F   I  
Sbjct: 283 FEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVA 342

Query: 328 FVEI------------MDRDG----VDEVLALMKEFRVN----------------PDVIT 355
             ++            M + G    V    +L+   RV+                P+ +T
Sbjct: 343 LCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTVT 402

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+ +MN       +D    +F+ MGK G  P+  +Y+ L +GY    + EKA  +L  M+
Sbjct: 403 YNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNML 462

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           +    P +V +  II G+C  G  D AI V + M  +G  P+  ++  L+ G+ +  +  
Sbjct: 463 KGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKME 522

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            A  +   M   G+ P + T+  L            A R+L ++K
Sbjct: 523 LASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMK 567



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 87/401 (21%), Positives = 158/401 (39%), Gaps = 70/401 (17%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M++  C    + T L++   +  K   A  +   +   G +P++ TY  L+  LT Q  F
Sbjct: 532 MDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLTKQNNF 591

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +   + E  + PD + ++ VIN    +G +  A++ F KM + G  P   TY++L
Sbjct: 592 SGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSL 651

Query: 184 IKGYGIAGKPEES-------------------VKLLDLMSREGNV--------------- 209
           I+  G  G+ EE+                   VK++++    G V               
Sbjct: 652 IQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGC 711

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA------------SGMKPDVVT------- 250
           +P L+TY+VL++   NE        V HK+ A              +  DV++       
Sbjct: 712 QPTLQTYDVLIKGLQNEM-------VYHKLVALPNAASTSTFDDQIINKDVISVLSSKLA 764

Query: 251 ----------YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
                     Y+ + +  +++G   +A  +   M      PN  T    +    +  K+ 
Sbjct: 765 ELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVD 824

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
            A+   + M +     +L  +  LI    ++  R     V   M    +N D I ++ ++
Sbjct: 825 LAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILI 884

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
           N    AG+ D C E    M      P +HA +ILA+  ++E
Sbjct: 885 NGLLGAGYKDLCMEFLHIMETNRRNPSSHARTILAREALKE 925



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 85/174 (48%), Gaps = 8/174 (4%)

Query: 353 VITYSTIMNAWS----TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           + TY+T++   +    T+  MD+  +I     + G++P+   Y+ +     ++     AE
Sbjct: 193 LFTYTTLLIQLNKLNMTSTVMDRYHQIL----REGLQPNLLIYNSVINALCKDGNVRDAE 248

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            ++  + +SG  P+   +T++I G+C +  +D A E+F++M E G  PN  T+ TL+ G 
Sbjct: 249 SIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDEEGCEPNAATYSTLINGL 308

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             + +   A + +  M   GV P   TF     A    G  ++A +I   +K K
Sbjct: 309 CNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIEDAWKIFIDMKKK 362


>gi|295830913|gb|ADG39125.1| AT5G21222-like protein [Capsella grandiflora]
          Length = 166

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 105/166 (63%), Positives = 138/166 (83%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           LIE GHKPS++TYTTL+ ALT QK F+S+ S++S+VE+NG+ PD+I FNA+INA SESGN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           +++AM  F KMKESG  PTTST+NTLIKGYG  GK EES +LL+LM R+  ++PN RT N
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCN 120

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
           +LV+AWCN++ I EAWN+++KM + G+KPDVVT+NT+A AYA+ GE
Sbjct: 121 ILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIGE 166



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 51/165 (30%), Positives = 87/165 (52%), Gaps = 6/165 (3%)

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR--EGNVKPNLRTYNVLVRAWCNEK 227
           E G  P+  TY TL+       + +    LL L+S+  +  +KP+   +N ++ A     
Sbjct: 3   EEGHKPSIITYTTLVTALT---RQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESG 59

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI-VEMEHNGVQPNGRTC 286
           N+ +A  +  KM  SG KP   T+NT+   Y + G+ +++  ++ + +    +QPN RTC
Sbjct: 60  NLDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTC 119

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            I++  +C + KI+EA      M+ YGV P++V FN L K +  I
Sbjct: 120 NILVQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARI 164



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 89/159 (55%), Gaps = 1/159 (0%)

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           KP++ TY  LV A   +K+     +++ K+  +G+KPD + +N I  A +++G  DQA +
Sbjct: 7   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 66

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGF 328
           +  +M+ +G +P   T   +I GY K GK++E+ R    M ++  + PN    N+L++ +
Sbjct: 67  IFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 126

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
                 +    ++  M+ + V PDV+T++T+  A++  G
Sbjct: 127 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 165



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 80/159 (50%), Gaps = 1/159 (0%)

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G KP ++TY T+ TA  +         +I ++E NG++P+      II+   + G + +A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM-KEFRVNPDVITYSTIMN 361
           ++    MKE G  P    FN LIKG+ +J   +    +L LM ++  + P+  T + ++ 
Sbjct: 65  MKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNILVQ 124

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           AW     +++   I   M   G+KPD   ++ LAK Y R
Sbjct: 125 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYAR 163



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 83/160 (51%), Gaps = 1/160 (0%)

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G  P+++ +  L+           +  +++ +++  + PD I ++ I+NA S +G +D
Sbjct: 3   EEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLD 62

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI-ESGFHPNVVIFTTI 429
           +  +IF+ M ++G KP    ++ L KGY +  + E++  LL  M+ +    PN      +
Sbjct: 63  QAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNIL 122

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +  WC+   ++ A  +  KM  +GV P++ TF TL   Y+
Sbjct: 123 VQAWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYA 162



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 1/158 (0%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P +ITY+T++ A +          +   + K G+KPD   ++ +          ++A ++
Sbjct: 8   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 67

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYS 469
              M ESG  P    F T+I G+   G ++ +  + + M  +  + PN +T   L+  + 
Sbjct: 68  FEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWC 127

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
             R+   A  I+  M+++GV P   TF  LA+A    G
Sbjct: 128 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLAKAYARIG 165



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 1/121 (0%)

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G KP    Y+ L     R++       L+  + ++G  P+ ++F  II+     G++D+A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM-KAFGVHPQKSTFLLLAE 501
           +++F+KM E G  P   TF TL+ GY +  +   +  +L++M +   + P   T  +L +
Sbjct: 65  MKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLLELMLRDEMLQPNDRTCNILVQ 124

Query: 502 A 502
           A
Sbjct: 125 A 125



 Score = 47.8 bits (112), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%)

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           +IE G  P+++ +TT+++           + +  K+ ++G+ P+   F  ++   SE+  
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
             +A +I + MK  G  P  STF  L +     G  +E+ R+L
Sbjct: 61  LDQAMKIFEKMKESGCKPTTSTFNTLIKGYGKJGKLEESSRLL 103


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 242/449 (53%), Gaps = 3/449 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N   + G   +A   ++ +++ G  P++VTY +++AAL   +  +    +++
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLT 258

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +NG+ P+   +N++++ +  SG  +EA+    KM   G+ P   TYN+L+      G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G +KP + TY  L++ +  +  + E   ++  M  +G+ P+   +
Sbjct: 319 RCTEARKMFDSMTKRG-LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  AYA+ G+ DQA  V  +M   G+ P+  T G +I   CK G++++A+R+   M +
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 312 YGVHPNLVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             + P  +++N LI     I D+ D   E++  M +  +  D I +++I+++    G + 
Sbjct: 438 ERLSPGNIVYNSLIHSLC-IFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVI 496

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +++FD M + G+KP+   YS L  GY    + ++A +LL +M+  G  P+ V + T+I
Sbjct: 497 ESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLI 556

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+C    M+ A+ +F +M   GVSP++ T+  ++ G  + R+   A+E+   +   G  
Sbjct: 557 NGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQ 616

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + ST+ ++        LT EA R+   +
Sbjct: 617 LELSTYNIILHGLCKNNLTDEALRMFQNL 645



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 217/426 (50%), Gaps = 4/426 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAI-FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           + T L+  L    +  +A  I    + + G  P++ +Y  LL  L  + R      ++  
Sbjct: 128 AFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187

Query: 133 VEENGMD--PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + ++G D  PD + +  VIN F + G++++A  T+ +M + G+ P   TYN++I     A
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKA 247

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              ++++++L  M + G V PN RTYN +V  +C+     EA   + KM + G++PDVVT
Sbjct: 248 QAMDKAMEVLTSMVKNG-VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++     +NG   +A ++   M   G++P   T G ++ GY  +G + E       M 
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+HPN  +F++LI  + +    D    V + M++  +NPD +TY T++     +G ++
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                F+ M    + P    Y+ L        + +KA+EL++ M++ G   + + F +II
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSII 486

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C +G +  + ++FD M   GV PN+ T+ TL+ GY  A +   A ++L  M + G+ 
Sbjct: 487 DSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSVGMK 546

Query: 491 PQKSTF 496
           P   T+
Sbjct: 547 PDCVTY 552



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 207/412 (50%), Gaps = 5/412 (1%)

Query: 83  IERGKPQEAQAIFNNLIEGGHK---PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           + R  P  A + +N +   G     P+L TY  L+ +     R +   + +  V + G  
Sbjct: 64  VARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFR 123

Query: 140 PDSIFFNAVINAFSESGNMEEAMD-TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            D+I F  ++          +AMD    +M + G  P   +YN L+KG     + +E+++
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183

Query: 199 LLDLMSRE-GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           LL +M  + G+  P++ +Y  ++  +  E ++ +A+   H+M   G+ P+VVTYN+I  A
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAA 243

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+A EV+  M  NGV PN RT   I+ GYC  G+ KEA+ F + M   GV P+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N L+    +        ++   M +  + P++ TY T++  ++T G + +   + D
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + GI P+ + +SIL   Y ++ + ++A  +   M + G +P+ V + T+I   C  G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            ++ A+  F++M +  +SP    + +L+       +  +A+E++  M   G+
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGI 475



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/463 (22%), Positives = 223/463 (48%), Gaps = 36/463 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM+ L + G+  EA+ +F+++ + G KP + TY TLL     +     +H ++ 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  NG+ P+   F+ +I A+++ G +++AM  F KM++ GL P T TY T+I     +G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 192 KPEESVKLLDLMSRE----GNVKPN----------------------------LRT--YN 217
           + E++++  + M  E    GN+  N                            L T  +N
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFN 483

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++ + C E  + E+  +   M   G+KP+++TY+T+   Y   G+ D+A +++  M   
Sbjct: 484 SIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEATKLLASMVSV 543

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G++P+  T   +I+GYCK  ++++AL   R M+  GV P+++ +N++++G  +       
Sbjct: 544 GMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAA 603

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E+   + E     ++ TY+ I++        D+   +F ++    ++ +   ++I+   
Sbjct: 604 KELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGA 663

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
            ++    ++A++L   +  +G  P+V  ++ +       G ++   ++F  M E+G + N
Sbjct: 664 LLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTAN 723

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIM--KAFGVHPQKSTFLL 498
            +   +++    +     RA   L ++  K F +    ++  L
Sbjct: 724 SRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFL 766



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/335 (26%), Positives = 157/335 (46%), Gaps = 5/335 (1%)

Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V   + M+R G   V PNL TY +L+ + C    +   +  +  +   G + D + 
Sbjct: 69  PAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIA 128

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +      +     A ++++  M   G  PN  +  I++ G C E + +EAL   + M
Sbjct: 129 FTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMM 188

Query: 310 KEYG--VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            + G    P++V +  +I GF +  D D        M +  + P+V+TY++I+ A   A 
Sbjct: 189 PDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQ 248

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            MDK  E+   M K G+ P+   Y+ +  GY    +P++A   L  M   G  P+VV + 
Sbjct: 249 AMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYN 308

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +++   C +G    A ++FD M + G+ P + T+ TL+ GY+          +L +M   
Sbjct: 309 SLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 368

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G+HP    F +L  A    G   +A  + SK++ +
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/301 (21%), Positives = 148/301 (49%), Gaps = 1/301 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++  C        +++S  + G+  E++ +F+ ++  G KP+++TY+TL+    +  + 
Sbjct: 471 LDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKM 530

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +++ +   GM PD + +N +IN + +   ME+A+  F +M+ SG++P   TYN +
Sbjct: 531 DEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNII 590

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++G     +   + K L +   E   +  L TYN+++   C      EA  +   +  + 
Sbjct: 591 LQGL-FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 649

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++ +  T+N +  A  + G  D+A+++   +  NG+ P+ RT  ++     ++G ++E  
Sbjct: 650 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 709

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
               +M+E G   N  + N +++  ++  D       L ++ E   + +  T S  ++  
Sbjct: 710 DLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASLFLDLL 769

Query: 364 S 364
           S
Sbjct: 770 S 770


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 125/416 (30%), Positives = 200/416 (48%), Gaps = 5/416 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++ L   GK  EA  +F+ +IE G   + V Y  L+  L   +     + ++ 
Sbjct: 45  VATYTIIVDRLCRAGKVDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLE 104

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G +PD+I +N +++     G + EA   F  M   G +P    YN L+      G
Sbjct: 105 EMASKGYEPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEG 164

Query: 192 KPEES---VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
           K  E+    K +D+  R+  V P+L TYN L+  +C  +   EA  +   + A G  PD 
Sbjct: 165 KVAEAWGLFKTMDMADRK--VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDT 222

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTYN+I    A+    D+AEE+  +M  +G  PNG T  I++SG+C+ G +   L     
Sbjct: 223 VTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEE 282

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M E    P++++ N +I    +    D   +VL  M +    PDV+TY+ +++       
Sbjct: 283 MTEKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNL 342

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +DK  E+F  M   G  PD  +YS++  G  +  +   A  L   MIE    P+VV F  
Sbjct: 343 VDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNI 402

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           ++ G C  G +D A ++ D M EH V P+  T  TLM G    ++   A  + Q M
Sbjct: 403 LMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYM 458



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 209/415 (50%), Gaps = 5/415 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHK--PSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           L+++L + GK  EA  +F  +     K  P L+TY TL+      ++ +    +   V  
Sbjct: 156 LLDALYKEGKVAEAWGLFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIA 215

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  PD++ +N+++   +   NM+EA + F KM +SG  P  +TY+ ++ G+   G    
Sbjct: 216 KGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMAR 275

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
            ++L + M+ E    P++   N ++   C  K + +A  V+ +M+  G  PDVVTYN + 
Sbjct: 276 CLELYEEMT-EKRFSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILL 334

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               +    D+A E+   M  NG  P+  +  ++++G CK  K+ +A      M E  + 
Sbjct: 335 DGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLV 394

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++V FN+L+ G  +    D   ++L +M E  V PD +T +T+M+        D+   +
Sbjct: 395 PDVVTFNILMDGLCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRL 454

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG--FHPNVVIFTTIISGW 433
           F  M + G   D   ++I+  G  RE +  +A     +M++S   F P+VV +TT+++  
Sbjct: 455 FQYMVEKGTVADVLPHNIVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNAL 514

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
              G +D+A++ F +M   G +P+   + TLM G  +  +  +A+ + Q MK  G
Sbjct: 515 IEAGRVDQAVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 569



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 213/462 (46%), Gaps = 38/462 (8%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           + E G +P +VTY+T+++ L    +      ++ ++ E G++PD   +  +++    +G 
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           ++EA + F KM E G +  T  YN LI G       E + KLL+ M+ +G  +P+  TYN
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKG-YEPDNITYN 119

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI--VEME 275
            ++   C    ++EA      M + G  PDVV YN +  A  + G+  +A  +   ++M 
Sbjct: 120 TILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMA 179

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
              V P+  T   +I G+C+  K  EA++  + +   G  P+ V +N ++ G     + D
Sbjct: 180 DRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMD 239

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF------------------- 376
             +E+   M +    P+  TYS +++     G M +C E++                   
Sbjct: 240 EAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVI 299

Query: 377 ----------------DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
                           ++M K G  PD   Y+IL  G  +    +KA EL  TM+++G  
Sbjct: 300 DMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCA 359

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P++V ++ +++G C    +  A  +FD+M E  + P++ TF  LM G  +A +   A+++
Sbjct: 360 PDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDL 419

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           L +M    V P   T   L         T EA R+   +  K
Sbjct: 420 LDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEK 461



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 170/348 (48%), Gaps = 11/348 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L  +    EA+ +F  +++ G  P+  TY+ +L+             +  ++ E  
Sbjct: 228 ILLGLARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKR 287

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD +  NAVI+   ++  +++A     +M + G  P   TYN L+ G       +++ 
Sbjct: 288 FSPDVLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAH 347

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L   M   G   P++ +Y+V++   C    + +A  +  +M    + PDVVT+N +   
Sbjct: 348 ELFSTMVDNG-CAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDG 406

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+ D+A++++  M  + V P+G TC  ++ G C++ +  EA+R  + M E G   +
Sbjct: 407 LCKAGKLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVAD 466

Query: 318 LVIFNLLIKGFVEIMDRDG-VDEVLALMKEF-----RVNPDVITYSTIMNAWSTAGFMDK 371
           ++  N+++ G      R+G + + L   K         +PDV+TY+T++NA   AG +D+
Sbjct: 467 VLPHNIVLAGLC----REGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQ 522

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
             + F  M  +G  PD  AY+ L  G  ++    +A+ L   M E GF
Sbjct: 523 AVDYFQQMTGSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGF 570



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 94/208 (45%), Gaps = 1/208 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S + ++N L +  K  +A+ +F+ +IE    P +VT+  L+  L    + +    ++ 
Sbjct: 362 IVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLD 421

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + E+ + PD +    +++        +EA+  F  M E G       +N ++ G    G
Sbjct: 422 VMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREG 481

Query: 192 KPEESVKLLDLMSR-EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           K  +++     M + +G   P++ TY  LV A      + +A +   +M  SG  PD V 
Sbjct: 482 KLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVA 541

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNG 278
           YNT+     + G   QA+ +   M+  G
Sbjct: 542 YNTLMNGLRKQGRHIQADRLTQAMKEKG 569


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 224/430 (52%), Gaps = 1/430 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A A F  ++    +PS+V +   L +   +K+++++ S+ +Q++   +  +    N +I
Sbjct: 76  DALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILI 135

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N      +++ ++    KM + G+ P   T+N LI G    GK +E+V+L + M + G+ 
Sbjct: 136 NCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGH- 194

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +PN+ +Y  ++   C   N + A +V  KM  +G KP+VVTY+TI  +  ++   + A E
Sbjct: 195 EPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAME 254

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
            + EM   G+ PN  T   I+ G+C  G++ EA R  + M    V PN V F +L+ G  
Sbjct: 255 FLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLC 314

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +         V   M E  V PD+ TY+ +M+ +     M++ K++F+ M + G  P AH
Sbjct: 315 KEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAH 374

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           +Y+IL  GY + +  ++A+ LL  M     +P+ V ++T++ G C  G    A+ +F +M
Sbjct: 375 SYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEM 434

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
           C +G  PNL T+  L+ G+ +      A ++L+ MK   + P    + +L E     G  
Sbjct: 435 CSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKL 494

Query: 510 KEAKRILSKI 519
           + AK + SK+
Sbjct: 495 EVAKELFSKL 504



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 208/394 (52%), Gaps = 1/394 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N L + G    A  +F  + + G KP++VTY+T++ +L   +  N     +S
Sbjct: 198 VISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLS 257

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E G+ P+   +N++++ F   G + EA   F +M    + P T T+  L+ G    G
Sbjct: 258 EMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEG 317

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E+  + + M+ +G V+P++ TYN L+  +C ++ + EA  V   M   G  P   +Y
Sbjct: 318 MVSEARLVFETMTEKG-VEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSY 376

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y ++   D+A+ ++ EM H  + P+  T   ++ G C+ G+ KEAL   + M  
Sbjct: 377 NILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCS 436

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           YG HPNLV + +L+ GF +    D   ++L  MKE ++ P+++ Y+ ++     AG ++ 
Sbjct: 437 YGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEV 496

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            KE+F  +   G +PD   Y+++ KG ++E   ++A +L   M + GF PN   +  +I 
Sbjct: 497 AKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQ 556

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           G+  +     AI + D+M     S NL TF+ L+
Sbjct: 557 GFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 227/434 (52%), Gaps = 13/434 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L+N L   GK +EA  +FN +++ GH+P++++YTT++  L      +    +  ++
Sbjct: 165 TFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKM 224

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+NG  P+ + ++ +I++  +   + +AM+   +M E G+ P   TYN+++ G+   G+ 
Sbjct: 225 EQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQL 284

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            E+ +L  +++ R+  V PN  T+ +LV   C E  ++EA  V   M   G++PD+ TYN
Sbjct: 285 NEATRLFKEMVGRD--VMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYN 342

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +   Y      ++A++V   M   G  P   +  I+I+GYCK  ++ EA      M   
Sbjct: 343 ALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHK 402

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE---FRVNPDVITYSTIMNAWSTAGFM 369
            ++P+ V ++ L++G  ++       E L L KE   +  +P+++TY  +++ +   G +
Sbjct: 403 ALNPDTVTYSTLMQGLCQL---GRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHL 459

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D+  ++   M +  ++P+   Y+IL +G     + E A+EL   +   G  P++  +T +
Sbjct: 460 DEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVM 519

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM--KAF 487
           I G   +G  D A ++F KM + G  PN  ++  ++ G+ + +    A  ++  M  K F
Sbjct: 520 IKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRF 579

Query: 488 GVHPQKSTFLLLAE 501
            V+   STF +L +
Sbjct: 580 SVN--LSTFQMLLD 591



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 153/315 (48%)

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
           N +P++  +   + ++  +K  +   ++ ++M    +  +V + N +     +    D +
Sbjct: 88  NPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFS 147

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
             V+ +M   G+ P+  T   +I+G C EGKIKEA+     M + G  PN++ +  +I G
Sbjct: 148 VSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVING 207

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             +  +     +V   M++    P+V+TYSTI+++      ++   E   +M + GI P+
Sbjct: 208 LCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPN 267

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ +  G+    +  +A  L   M+     PN V FT ++ G C +G +  A  VF+
Sbjct: 268 VFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFE 327

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            M E GV P++ T+  LM GY   R    A+++ +IM   G  P   ++ +L      + 
Sbjct: 328 TMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSR 387

Query: 508 LTKEAKRILSKIKNK 522
              EAK +L+++ +K
Sbjct: 388 RMDEAKSLLAEMYHK 402



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 140/311 (45%), Gaps = 7/311 (2%)

Query: 210 KPNL-RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           KP+L +  +  V    N   + +A    ++M     +P VV +     ++A+  +     
Sbjct: 54  KPSLPKNNDGFVSNNSNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVV 113

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            +  +M+   V  N  +  I+I+  C+   +  ++     M + G+HP+ + FN LI G 
Sbjct: 114 SLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALING- 172

Query: 329 VEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
             + +   + E + L  E       P+VI+Y+T++N     G      ++F  M + G K
Sbjct: 173 --LCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCK 230

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P+   YS +     +++    A E L  M+E G  PNV  + +I+ G+C+ G ++ A  +
Sbjct: 231 PNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRL 290

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F +M    V PN  TF  L+ G  +      A  + + M   GV P  ST+  L +    
Sbjct: 291 FKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCL 350

Query: 506 TGLTKEAKRIL 516
             L  EAK++ 
Sbjct: 351 QRLMNEAKKVF 361



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/264 (24%), Positives = 119/264 (45%)

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
           + N   D A      M     +P+    G  +  + K+ +    +     M  + V  N+
Sbjct: 69  SNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNV 128

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
              N+LI     +   D    VL  M +  ++PD IT++ ++N     G + +  E+F++
Sbjct: 129 YSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNE 188

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M K G +P+  +Y+ +  G  +      A ++   M ++G  PNVV ++TII   C D  
Sbjct: 189 MVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRL 248

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           ++ A+E   +M E G+ PN+ T+ +++ G+    Q   A  + + M    V P   TF +
Sbjct: 249 VNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTI 308

Query: 499 LAEARRATGLTKEAKRILSKIKNK 522
           L +     G+  EA+ +   +  K
Sbjct: 309 LVDGLCKEGMVSEARLVFETMTEK 332



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 104/225 (46%)

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           + +AL     M      P++V F   +  F +      V  +   M  FRV  +V + + 
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++N       +D    +   M K GI PDA  ++ L  G   E + ++A EL   M++ G
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PNV+ +TT+I+G C  G+   A++VF KM ++G  PN+ T+ T++    + R    A 
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           E L  M   G+ P   T+  +       G   EA R+  ++  ++
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRD 298



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 89/186 (47%), Gaps = 1/186 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + LM  L + G+P+EA  +F  +   G  P+LVTY  LL         +    ++  ++E
Sbjct: 412 STLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALKLLKSMKE 471

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             ++P+ + +  +I     +G +E A + F K+   G  P   TY  +IKG    G  +E
Sbjct: 472 KKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLLKEGLSDE 531

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  L   M  +G + PN  +YNV+++ +   ++ + A  ++ +M       ++ T+  + 
Sbjct: 532 AYDLFRKMEDDGFL-PNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSVNLSTFQMLL 590

Query: 256 TAYAQN 261
              +Q+
Sbjct: 591 DLESQD 596


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  224 bits (572), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 127/421 (30%), Positives = 221/421 (52%), Gaps = 7/421 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ + T L+N L + GK  +A  +F++++  G +P + TYTT++  L       +   ++
Sbjct: 167 TIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLL 226

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++EE G  P+ + ++ +I++  +   + EA+D F  MK  G++P   TYN+LI+G    
Sbjct: 227 KKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNF 286

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + +E+  LL+ M R  N+ P++ T+NVLV   C E  ++EA  V+  M   G++PDVVT
Sbjct: 287 SQWKEASALLNEM-RSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVT 345

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+++   Y+   E  +A ++   M   G +P+  +  I+I+GYCK  +I EA +    M 
Sbjct: 346 YSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMI 405

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAG 367
             G+ PN V +N LI G  ++     + E   L K    N   P++ TYS +++ +   G
Sbjct: 406 HQGLTPNNVSYNTLIHGLCQL---GSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQG 462

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
           +  K   +F  M     KP+   Y+IL     +      A +L   +   G  PN  I+T
Sbjct: 463 YFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYT 522

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           TII+G C +G +D A+E F  M E G  P+  ++  ++ G+   +   RA +++  M+  
Sbjct: 523 TIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDK 582

Query: 488 G 488
           G
Sbjct: 583 G 583



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 226/431 (52%), Gaps = 2/431 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           +A A FN+++     P ++ +T LL+A+  + + ++++ S+  Q+E  G+ P+    + +
Sbjct: 80  DALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSIL 139

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           IN FS    ++ A     K+ + GL PT  T+ TLI      GK  ++++L D M   G 
Sbjct: 140 INCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARG- 198

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            +P++ TY  ++   C       A  ++ KM  +G +P+VVTY+TI  ++ ++   ++A 
Sbjct: 199 CRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEAL 258

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           ++   M+  G+ P+  T   +I G C   + KEA      M+   + P++V FN+L+   
Sbjct: 259 DIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTI 318

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +         VL  M E  V PDV+TYS++M  +S    + + +++FD M   G KPD 
Sbjct: 319 CKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDV 378

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
            +Y+IL  GY + +  ++A++L   MI  G  PN V + T+I G C  GS+  A  +F  
Sbjct: 379 FSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKN 438

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M  +G  PNL T+  L+ G+ +     +A  + + M++    P    + +L +A   +G 
Sbjct: 439 MHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGN 498

Query: 509 TKEAKRILSKI 519
            ++A+++ S++
Sbjct: 499 LRDARKLFSEL 509



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/488 (23%), Positives = 225/488 (46%), Gaps = 5/488 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIE-GGHKPSLVTYTTLLAALTIQKR 122
           ++++    +   TKL++++++ G+  +        +E  G  P++ T + L+   +  +R
Sbjct: 89  LHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTLSILINCFSHLQR 148

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +   S+++++ + G+ P  + F  +IN   + G   +AM+ F  M   G  P   TY T
Sbjct: 149 VDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTT 208

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G    G+   +  LL  M   G  +PN+ TY+ ++ +   ++ + EA ++   M   
Sbjct: 209 IINGLCKIGETAAAAGLLKKMEEAG-CQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVK 267

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ PD+ TYN++        +  +A  ++ EM    + P+  T  +++   CKEGK+ EA
Sbjct: 268 GISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEA 327

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
               +TM E GV P++V ++ L+ G+    +     ++   M      PDV +Y+ ++N 
Sbjct: 328 QGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILING 387

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +     +D+ K++F++M   G+ P+  +Y+ L  G  +     +A  L   M  +G  PN
Sbjct: 388 YCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPN 447

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           +  ++ ++ G+C  G   +A  +F  M      PNL  +  L+    ++     A ++  
Sbjct: 448 LFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFS 507

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
            +   G+ P    +  +       GL  EA   L   +N E       E    V     L
Sbjct: 508 ELFVKGLQPNAQIYTTIINGLCKEGLLDEA---LEAFRNMEEDGCPPDEISYNVIIRGFL 564

Query: 543 YHKEATTA 550
           +HK+ + A
Sbjct: 565 HHKDESRA 572



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 85/278 (30%), Positives = 147/278 (52%), Gaps = 1/278 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++++ + GK  EAQ +   + E G +P +VTY++L+   +++        +   +   G
Sbjct: 314 LVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKG 373

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD   +N +IN + +   ++EA   F +M   GLTP   +YNTLI G    G   E+ 
Sbjct: 374 CKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREAR 433

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M   GN+ PNL TY++L+  +C +    +A+ +   M ++  KP++V YN +  A
Sbjct: 434 NLFKNMHTNGNL-PNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDA 492

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             ++G    A ++  E+   G+QPN +    II+G CKEG + EAL   R M+E G  P+
Sbjct: 493 MCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPD 552

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
            + +N++I+GF+   D     +++  M++     DV T
Sbjct: 553 EISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 178/400 (44%), Gaps = 35/400 (8%)

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
           N+++A+ +F  M      P    +  L+      G+  ++V  L        + PN+ T 
Sbjct: 77  NIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPNIYTL 136

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           ++L+  + + + +  A++V+ K+   G++P +VT+ T+     + G+  QA E+  +M  
Sbjct: 137 SILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFDDMVA 196

Query: 277 NGVQPNGRTCGIIISGYCKEG-----------------------------------KIKE 301
            G +P+  T   II+G CK G                                   ++ E
Sbjct: 197 RGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNE 256

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           AL     MK  G+ P++  +N LI+G            +L  M+   + PD++T++ +++
Sbjct: 257 ALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVD 316

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                G + + + +   M + G++PD   YS L  GY    E  +A +L   MI  G  P
Sbjct: 317 TICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKP 376

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +V  +  +I+G+C    +D A ++F++M   G++PN  ++ TL+ G  +      A  + 
Sbjct: 377 DVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLF 436

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           + M   G  P   T+ +L +     G   +A R+   +++
Sbjct: 437 KNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQS 476



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/432 (23%), Positives = 177/432 (40%), Gaps = 109/432 (25%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M    CR  V + T ++N L + G+   A  +   + E G +P++VTY+T++ +    +R
Sbjct: 194 MVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRR 253

Query: 123 FNSIHSIMSQVEENGMDPDSIF------------------------------------FN 146
            N    I S ++  G+ PD IF                                    FN
Sbjct: 254 VNEALDIFSYMKVKGISPD-IFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +++   + G + EA      M E G+ P   TY++L+ GY +  +  E+ KL D M  +
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  KP++ +YN+L+  +C  K I EA  + ++M   G+ P+ V+YNT+     Q G   +
Sbjct: 373 G-CKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLRE 431

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEG----------------------------- 297
           A  +   M  NG  PN  T  I++ G+CK+G                             
Sbjct: 432 ARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILID 491

Query: 298 ------KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
                  +++A +    +   G+ PN  I                               
Sbjct: 492 AMCKSGNLRDARKLFSELFVKGLQPNAQI------------------------------- 520

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
               Y+TI+N     G +D+  E F +M + G  PD  +Y+++ +G++  ++  +A +L+
Sbjct: 521 ----YTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKDESRAVQLI 576

Query: 412 MTMIESGFHPNV 423
             M + GF  +V
Sbjct: 577 GEMRDKGFIADV 588



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/427 (22%), Positives = 165/427 (38%), Gaps = 46/427 (10%)

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA-DQAEEVIVEMEHNGVQPN 282
           C+ +NI +A    + M      P ++ +  + +A  + G+  D    +  +ME  G+ PN
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T  I+I+ +    ++  A      + + G+ P +V F  LI    ++       E+  
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 343 LMKEFRVNPDVITYSTIMNAW-------STAGFMDKCKE--------------------- 374
            M      PDV TY+TI+N         + AG + K +E                     
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252

Query: 375 -------IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
                  IF  M   GI PD   Y+ L +G     + ++A  LL  M      P++V F 
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            ++   C +G +  A  V   M E GV P++ T+ +LM+GYS   +   A ++   M   
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT-NEMEAEEDI-------PVESL 539
           G  P   ++ +L           EAK++ +++ ++  T N +     I        +   
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432

Query: 540 ERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYL 599
             L+    T  + PNL     ++  D         K   L R   S+         ++ +
Sbjct: 433 RNLFKNMHTNGNLPNLFTYSILL--DGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILI 490

Query: 600 SHSCKSG 606
              CKSG
Sbjct: 491 DAMCKSG 497


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 230/447 (51%), Gaps = 7/447 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLI----EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           L+  L +  + Q+A  + + ++     GG  P +V+YTT++  L  + + +  + +  ++
Sbjct: 173 LLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEM 232

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            + GM P+ I +N +++ +  SG  +EA+  F KM   G+ P   TYNTL+      G+ 
Sbjct: 233 LDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRS 292

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+ K+ D M ++G+ KP+   Y  L+  +  E  + +   ++  M  +G +PD   +N 
Sbjct: 293 MEARKVFDSMVKKGH-KPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNI 351

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL-RFARTMKEY 312
           +  AYA++G  D+A     +M   G+ PN  T G ++   C+ GK+ +A+ +F R + E 
Sbjct: 352 LIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISE- 410

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ PN V+F  LI G       D  +E+   M    + P+ I ++T++N     G + + 
Sbjct: 411 GLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRA 470

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           K IFD M +  ++ D   Y+ L  GY  + + ++A +LL  M+  G  PN V + TII+G
Sbjct: 471 KNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIING 530

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C +G ++ A  +F +M   GV+P +  + T++ G  + R+   A+E+   M   G+   
Sbjct: 531 YCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLP 590

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKI 519
             T+ ++ +       T +A R+   +
Sbjct: 591 IGTYNIILQGLCQNNCTDDALRMFHNL 617



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 209/448 (46%), Gaps = 1/448 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N L+  G+  +A  +F+ +++ G  P+ +TY  LL       +      I  
Sbjct: 206 VVSYTTVINGLLREGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFR 265

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G++PD + +N ++    ++G   EA   F  M + G  P +S Y TL+ GY   G
Sbjct: 266 KMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEG 325

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              +  +LLD+M R G  +P+   +N+L+ A+     + EA     KM   G+ P++VTY
Sbjct: 326 YLVQMHQLLDVMVRNGT-QPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTY 384

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+  A  + G+ D A      +   G+ PNG     +I G C   K  +A   A  M  
Sbjct: 385 GTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIG 444

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN + FN L+    +         +  LM    V  DVITY+T+++ +   G +D+
Sbjct: 445 RGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDE 504

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++ + M   G+KP+   Y+ +  GY +    E A  L   M   G +P +VI++TI+ 
Sbjct: 505 ATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILH 564

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G      +  A E++  M + G+   + T+  ++ G  +      A  +   +     H 
Sbjct: 565 GLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHL 624

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
           Q  TF ++ +A    G   EAK + + +
Sbjct: 625 QNRTFNIMIDALLKGGRHDEAKDLFASL 652



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 209/445 (46%), Gaps = 12/445 (2%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI-MSQVEENGMDPDSIF 144
           G    A A    +I  G     +T++ LL  L   KR +    I + ++   G  P++  
Sbjct: 110 GHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAFS 169

Query: 145 FNAVINAFSESGNMEEAMDTFWKM----KESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           +N ++    +    ++A+     M       G  P   +Y T+I G    G+ +++  L 
Sbjct: 170 YNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLF 229

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
           D M  +G + PN  TYN L+  +C+     EA  +  KM   G++PDVVTYNT+     +
Sbjct: 230 DEMLDQG-MSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCK 288

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
           NG + +A +V   M   G +P+    G ++ GY  EG + +  +    M   G  P+  I
Sbjct: 289 NGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYI 348

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           FN+LI  + +      VDE +    + R   ++P+++TY T+M+A    G +D     FD
Sbjct: 349 FNILIGAYAK---HGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFD 405

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +   G+ P+   +  L  G     + +KAEEL + MI  G  PN + F T+++  C +G
Sbjct: 406 RLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEG 465

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            + RA  +FD M    V  ++ T+ TL+ GY    +   A ++L+ M   GV P + T+ 
Sbjct: 466 MVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYN 525

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            +       G  ++A  +  ++ +K
Sbjct: 526 TIINGYCKNGRIEDACSLFRQMASK 550



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 180/389 (46%), Gaps = 34/389 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM  L + G+  EA+ +F+++++ GHKP    Y TLL     +     +H ++ 
Sbjct: 276 VVTYNTLMVYLCKNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLD 335

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  NG  PD   FN +I A+++ G ++EAM  F KM++ GL P   TY T++      G
Sbjct: 336 VMVRNGTQPDHYIFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVG 395

Query: 192 KPEESVKLLDLMSREG----------------------------------NVKPNLRTYN 217
           K ++++   D +  EG                                   + PN   +N
Sbjct: 396 KVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFN 455

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            L+   C E  +T A N+   M    ++ DV+TY T+   Y  +G+ D+A +++  M  +
Sbjct: 456 TLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLD 515

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           GV+PN  T   II+GYCK G+I++A    R M   GV+P +VI++ ++ G  +       
Sbjct: 516 GVKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAA 575

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E+   M +  +   + TY+ I+         D    +F ++           ++I+   
Sbjct: 576 KELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDA 635

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIF 426
            ++    ++A++L  +++  G  PNVV +
Sbjct: 636 LLKGGRHDEAKDLFASLLARGLVPNVVTY 664



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 167/342 (48%), Gaps = 1/342 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M++L   GK  +A + F+ LI  G  P+ V + TL+  L    +++    +  ++   G
Sbjct: 387 VMDALCRVGKVDDAMSQFDRLISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRG 446

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P++IFFN ++N   + G +  A + F  M    +     TY TLI GY + GK +E+ 
Sbjct: 447 ICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEAT 506

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL+ M  +G VKPN  TYN ++  +C    I +A ++  +MA+ G+ P +V Y+TI   
Sbjct: 507 KLLEGMVLDG-VKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHG 565

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             Q      A+E+ + M   G++    T  II+ G C+     +ALR    +     H  
Sbjct: 566 LFQTRRIAAAKELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQ 625

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              FN++I   ++    D   ++ A +    + P+V+TY  +M +    G +++  ++F 
Sbjct: 626 NRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFL 685

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
            + K G   D+   + L     ++ E  KA   L  + E+ F
Sbjct: 686 SLEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNF 727



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 28/112 (25%), Positives = 59/112 (52%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+   ++++L++ G+  EA+ +F +L+  G  P++VTY  ++ +L  Q     +  +   
Sbjct: 627 RTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLS 686

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           +E+NG   DS   NA++    + G + +A     K+ E+  +   ST  +L+
Sbjct: 687 LEKNGCTADSRMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLV 738


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 223/454 (49%), Gaps = 29/454 (6%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           + RS+ +L+ +L++    ++  A+F ++I+ G +P  V Y   + A  + K  +    +M
Sbjct: 121 STRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQAAVMLKDLDKGFELM 180

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + ++GM P    +N V+    +   +++A   F +M +  + P T TYNTLI GY   
Sbjct: 181 KSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKV 240

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP---- 246
           G  EE++   + M +E NV+ NL TYN L+   C    + +A  V+ +M  SG  P    
Sbjct: 241 GGIEEALGFKERM-KEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFL 299

Query: 247 ------------------------DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
                                   D  TY  +     + G  ++AEEV+ ++  NGV P+
Sbjct: 300 SFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPS 359

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             +  I+++ YC+EG +K+A+     M+E G+ PN + FN +I  F E  + D  +  + 
Sbjct: 360 KISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVR 419

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M E  V+P V TY++++N +   G   +C E  D+M KAGIKP+  +Y  L     +++
Sbjct: 420 RMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDR 479

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           +   AE +L  MI  G  PN  I+  +I   CS   +  A   FD+M + G+   L T+ 
Sbjct: 480 KLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYN 539

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           TL+ G     +  +AE++   M   G +P   T+
Sbjct: 540 TLINGLGRNGRVKKAEDLFLQMAGKGCNPDVITY 573



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 195/435 (44%), Gaps = 41/435 (9%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+   L+N L   G+ ++A+ +   L+E G  PS ++Y  L+ A   +           Q
Sbjct: 326 RTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQ 385

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +EE G++P+ I FN VI+ F E+G ++ A     +M E G++PT  TYN+LI GYG  G 
Sbjct: 386 MEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGH 445

Query: 193 PEESVKLLDLMSREG----------------------------------NVKPNLRTYNV 218
                + LD M + G                                   V PN   YN+
Sbjct: 446 FVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNM 505

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L+ A C+   + +A+    +M  SG+   +VTYNT+     +NG   +AE++ ++M   G
Sbjct: 506 LIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQMAGKG 565

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV- 337
             P+  T   +ISGY K    ++ L     MK  G+ P +  F+ LI        ++GV 
Sbjct: 566 CNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA----CRKEGVV 621

Query: 338 --DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
             D++   M +  + PD   Y+ ++ +++  G + K   +   M   G+  D   Y+ L 
Sbjct: 622 TMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVTYNSLI 681

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
             Y+R++   + + L+  M   G  P V  +  +I G C     + A   + +M E G+ 
Sbjct: 682 LAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLL 741

Query: 456 PNLKTFETLMWGYSE 470
            N+     L+ G  E
Sbjct: 742 LNVSMCYQLISGLRE 756



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 204/426 (47%), Gaps = 33/426 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   ++  L +  + ++A+ +F+ +I+    P+ VTY TL+                
Sbjct: 191 SVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFK 250

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTP--------------- 175
            +++E  ++ + + +N+++N    SG +++A +   +M+ SG  P               
Sbjct: 251 ERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGA 310

Query: 176 -------------TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
                           TY  L+ G    G+ E++ ++L  +   G V P+  +YN+LV A
Sbjct: 311 GDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENG-VTPSKISYNILVNA 369

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
           +C E ++ +A     +M   G++P+ +T+NT+ + + + GE D AE  +  M   GV P 
Sbjct: 370 YCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPT 429

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE--V 340
             T   +I+GY ++G       F   M + G+ PN++ +  LI    +  DR  +D   V
Sbjct: 430 VETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCK--DRKLIDAEIV 487

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           LA M    V+P+   Y+ ++ A  +   +      FD+M ++GI      Y+ L  G  R
Sbjct: 488 LADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGR 547

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
               +KAE+L + M   G +P+V+ + ++ISG+    +  + +E++DKM   G+ P + T
Sbjct: 548 NGRVKKAEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGT 607

Query: 461 FETLMW 466
           F  L++
Sbjct: 608 FHPLIY 613



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 184/415 (44%), Gaps = 40/415 (9%)

Query: 108 VTYTTLLAALTIQKR-FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW 166
           +T    L +L + K  F+S+  + + V +        F + ++   S S  ++EA D + 
Sbjct: 58  ITARRFLRSLLLTKTAFSSLSELHAHVSK------PFFSDNLLWLCSVSKMLDEATDLYS 111

Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
            M++ G  P+T + N L++    +   E+++ +   +   G  +P+   Y   V+A    
Sbjct: 112 TMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGT-RPDAVAYGKAVQAAVML 170

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           K++ + + +M  M   GM P V  YN +     +      A ++  EM    + PN  T 
Sbjct: 171 KDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTY 230

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM-- 344
             +I GYCK G I+EAL F   MKE  V  NLV +N L+ G       D   EVL  M  
Sbjct: 231 NTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEG 290

Query: 345 ----------------------------KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
                                       KE R+  D  TY  ++N     G ++K +E+ 
Sbjct: 291 SGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRI--DERTYCILLNGLCRVGRIEKAEEVL 348

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             + + G+ P   +Y+IL   Y +E + +KA      M E G  PN + F T+IS +C  
Sbjct: 349 AKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKFCET 408

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G +D A     +M E GVSP ++T+ +L+ GY +     R  E L  M   G+ P
Sbjct: 409 GEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKP 463



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 166/372 (44%), Gaps = 37/372 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+N   ++G         + + + G KP++++Y +L+  L   ++      ++
Sbjct: 429 TVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVL 488

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + +   G+ P++  +N +I A      +++A   F +M +SG+  T  TYNTLI G G  
Sbjct: 489 ADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRN 548

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ +++  L   M+ +G   P++ TYN L+  +    N  +   +  KM   G+KP V T
Sbjct: 549 GRVKKAEDLFLQMAGKG-CNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGT 607

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           ++ +  A  + G     +++  EM    + P+      +I  Y ++G + +A+   + M 
Sbjct: 608 FHPLIYACRKEGVV-TMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMV 666

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + GV  + V +N LI               LA +++ RV+                    
Sbjct: 667 DQGVDCDKVTYNSLI---------------LAYLRDRRVS-------------------- 691

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + K + DDM   G+ P    Y+IL KG    ++   A      M+E G   NV +   +I
Sbjct: 692 EIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMVERGLLLNVSMCYQLI 751

Query: 431 SGWCSDGSMDRA 442
           SG   +G +  A
Sbjct: 752 SGLREEGMLREA 763



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 134/268 (50%), Gaps = 12/268 (4%)

Query: 70  RTVRSMTKLMNSLIERG----KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           R V    ++ N LIE      K ++A   F+ +I+ G   +LVTY TL+  L    R   
Sbjct: 494 RGVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKK 553

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              +  Q+   G +PD I +N++I+ +++S N ++ ++ + KMK  G+ PT  T++ LI 
Sbjct: 554 AEDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIY 613

Query: 186 GYGIAGKPEESVKLLDLMSREG---NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
                   +E V  +D M +E    ++ P+   YN ++ ++  + N+ +A ++  +M   
Sbjct: 614 AC-----RKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQ 668

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+  D VTYN++  AY ++    + + ++ +M+  G+ P   T  I+I G C       A
Sbjct: 669 GVDCDKVTYNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGA 728

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             + R M E G+  N+ +   LI G  E
Sbjct: 729 YFWYREMVERGLLLNVSMCYQLISGLRE 756



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 42/182 (23%), Positives = 84/182 (46%)

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           D   ++ + M++    P   + + ++     +   +K   +F D+  +G +PDA AY   
Sbjct: 104 DEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKA 163

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            +  V  ++ +K  EL+ +M++ G  P+V  +  ++ G C    +  A ++FD+M +  +
Sbjct: 164 VQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNM 223

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            PN  T+ TL+ GY +      A    + MK   V     T+  L      +G   +A+ 
Sbjct: 224 VPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDARE 283

Query: 515 IL 516
           +L
Sbjct: 284 VL 285


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  224 bits (570), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 242/448 (54%), Gaps = 1/448 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N   + G   +A + ++ +++ G  P +VTY +++AAL   +  +    +++
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +NG+ PD + +N++++ +  SG  +EA+    KM+  G+ P   TY+ L+      G
Sbjct: 256 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G +KP + TY  L++ +  +  + E   ++  M  +G+ PD   +
Sbjct: 316 RCMEARKIFDSMTKRG-LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  AYA+ G+ DQA  V  +M   G+ PN  T G +I   CK G++++A+ +   M +
Sbjct: 375 SILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P  +++N LI G       +  +E++  M +  +  + I +++I+++    G + +
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +++F+ M + G+KP+   Y+ L  GY    + ++A +LL  M+  G  PN V ++T+I+
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C    M+ A+ +F +M   GVSP++ T+  ++ G  + R+   A+E+   +   G   
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 614

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
           + ST+ ++        LT +A ++   +
Sbjct: 615 ELSTYNIILHGLCKNKLTDDALQMFQNL 642



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 186/381 (48%), Gaps = 11/381 (2%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI--HSIMSQVEENGMDPDSIFFN 146
           ++A+ +F+ L+  G   S+      LA +       ++  ++ M++   + + PD   + 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I     +G ++        + + G       +  L+KG     +  +++ ++     E
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA---ASGMKPDVVTYNTIATAYAQNGE 263
               PN+ +YN+L++  C+E    EA  ++H MA     G  PDVV+Y T+   + + G+
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
           +D+A     EM   G+ P+  T   II+  CK   + +A+    TM + GV P+ + +N 
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           ++ G+          E +  +K+ R   V PDV+TYS +M+     G   + ++IFD M 
Sbjct: 272 ILHGYCS---SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
           K G+KP+   Y  L +GY  +    +   LL  M+ +G HP+  +F+ +I  +   G +D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVD 388

Query: 441 RAIEVFDKMCEHGVSPNLKTF 461
           +A+ VF KM + G++PN  T+
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTY 409



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 156/336 (46%), Gaps = 6/336 (1%)

Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V   + M+R G   V P+L TY +L+   C    +   +  +  +   G + D + 
Sbjct: 65  PAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIA 124

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +      +     A ++++  M   G  PN  +  I++ G C E + +EAL     M
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMM 184

Query: 310 KE---YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
            +    G  P++V +  +I GF +  D D        M +  + PDV+TY++I+ A   A
Sbjct: 185 ADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKA 244

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             MDK  E+ + M K G+ PD   Y+ +  GY    +P++A   L  M   G  P+VV +
Sbjct: 245 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTY 304

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           + ++   C +G    A ++FD M + G+ P + T+ TL+ GY+          +L +M  
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            G+HP    F +L  A    G   +A  + SK++ +
Sbjct: 365 NGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 400



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 169/354 (47%), Gaps = 4/354 (1%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           L + G+ ++A   F  +I+ G  P  + Y +L+  L    ++     ++ ++ + G+  +
Sbjct: 416 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 475

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           +IFFN++I++  + G + E+   F  M   G+ P   TYNTLI GY +AGK +E++KLL 
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M   G +KPN  TY+ L+  +C    + +A  +  +M +SG+ PD++TYN I     Q 
Sbjct: 536 GMVSVG-LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
                A+E+ V +  +G Q    T  II+ G CK     +AL+  + +    +      F
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N++I   +++   D   ++        + P+  TY  +       G +++  ++F  M  
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH---PNVVIFTTIISG 432
            G   D+   + + +  ++  E  +A   L  + E  F        +F  ++SG
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 134/267 (50%), Gaps = 1/267 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++  C        +++S  + G+  E++ +F  ++  G KP+++TY TL+    +  + 
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    ++S +   G+ P+++ ++ +IN + +   ME+A+  F +M+ SG++P   TYN +
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++G     +   + K L +   E   +  L TYN+++   C  K   +A  +   +    
Sbjct: 588 LQGL-FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           +K +  T+N +  A  + G  D+A+++ V    NG+ PN  T  ++      +G ++E  
Sbjct: 647 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +   +M++ G   +  + N +++  ++
Sbjct: 707 QLFLSMEDNGCTVDSGMLNFIVRELLQ 733


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 229/468 (48%), Gaps = 12/468 (2%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           TKL+          +A  +   ++E   KP +  Y  +++      R  S  +++ +++ 
Sbjct: 14  TKLIKGFFNSRNIDKATRVMG-ILEKHGKPDVFAYNAVISGFCKANRIESAKTVLDRMKR 72

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLIKGYGIAGKPE 194
            G  PD +  N +I  F   G ++ A+  F ++ K++   PT  TY  LI+ Y + G  +
Sbjct: 73  KGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGID 132

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           E++KLLD M   G ++P+  TYNV+ R  C E  +  A+  +  + + G KPDV+TYN +
Sbjct: 133 EALKLLDEMLSRG-LEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNIL 191

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             A    G+ D+ E+ + E+   G +PN  T  I+IS  C++GKI+E++   + MKE G+
Sbjct: 192 LRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGL 251

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P+   ++ LI  F      D   E L  M      PD++ Y+TIM A    G  D   E
Sbjct: 252 TPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVE 311

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           IF  + + G  P+  +Y+ +        +  +A  ++  M+  G  P+V+ + ++IS  C
Sbjct: 312 IFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLC 371

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            DG +D AI +   M      PN+ +++T++ G  +A +   A E+L  M   G  P ++
Sbjct: 372 RDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNET 431

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
           T+ LL E    +G         S+ +  E  N +     I  +S +RL
Sbjct: 432 TYTLLIEGIGFSG---------SRTQAMELANSLYIMNAISEDSFKRL 470



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 107/381 (28%), Positives = 199/381 (52%), Gaps = 3/381 (0%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD I    +I  F  S N+++A      +++ G  P    YN +I G+  A + E +  +
Sbjct: 8   PDVILCTKLIKGFFNSRNIDKATRVMGILEKHG-KPDVFAYNAVISGFCKANRIESAKTV 66

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA-SGMKPDVVTYNTIATAY 258
           LD M R+G   P++ T+N+++  +C +  I  A  V  ++   +  KP ++TY  +  AY
Sbjct: 67  LDRMKRKG-FSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAY 125

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
              G  D+A +++ EM   G++P+  T  +I  G CKEGK+  A  F RT+   G  P++
Sbjct: 126 ILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDV 185

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           + +N+L++  +     D  ++ ++ +      P+V+TYS ++++    G +++   +   
Sbjct: 186 ITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKV 245

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M + G+ PDA+ Y  L   + RE + + A E L  MI  GF P++V + TI++  C +G+
Sbjct: 246 MKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGN 305

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
            D A+E+F K+ E G  PN+ ++ T++     +   +RA  ++  M + G+ P   T+  
Sbjct: 306 GDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNS 365

Query: 499 LAEARRATGLTKEAKRILSKI 519
           L       G+  EA  +L+ +
Sbjct: 366 LISCLCRDGMVDEAIGLLADM 386



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 75/319 (23%), Positives = 134/319 (42%), Gaps = 41/319 (12%)

Query: 239 MAASGMKPDVV----------------------------------TYNTIATAYAQNGEA 264
           M A   +PDV+                                   YN + + + +    
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGKPDVFAYNAVISGFCKANRI 60

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR-FARTMKEYGVHPNLVIFNL 323
           + A+ V+  M+  G  P+  T  I+I  +C +GKI  AL+ F   +K+    P L+ + +
Sbjct: 61  ESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTI 120

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           LI+ ++      G+DE L L+ E     + PD  TY+ I       G +D+  E    + 
Sbjct: 121 LIEAYIL---EGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLN 177

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             G KPD   Y+IL +  + + + ++ E+ +  +   G  PNVV ++ +IS  C DG ++
Sbjct: 178 SRGCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIE 237

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            ++ +   M E G++P+   ++ L+  +    +   A E L  M   G  P    +  + 
Sbjct: 238 ESVNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIM 297

Query: 501 EARRATGLTKEAKRILSKI 519
            A    G    A  I  K+
Sbjct: 298 AALCKNGNGDHAVEIFGKL 316


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 241/448 (53%), Gaps = 1/448 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N   + G   +A + ++ +++ G  P +VTY +++AAL   +  +    +++
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLN 255

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +NG+ PD + +N++++ +  SG  +EA+    KM+  G+ P   TY+ L+      G
Sbjct: 256 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNG 315

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G +KP + TY  L++ +  +  + E   ++  M  +G+ PD   +
Sbjct: 316 RCMEARKIFDSMTKRG-LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVF 374

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  AYA  G+ DQA  V  +M   G+ PN  T G +I   CK G++++A+ +   M +
Sbjct: 375 SILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 434

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P  +++N LI G       +  +E++  M +  +  + I +++I+++    G + +
Sbjct: 435 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 494

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +++F+ M + G+KP+   Y+ L  GY    + ++A +LL  M+  G  PN V ++T+I+
Sbjct: 495 SEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLIN 554

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C    M+ A+ +F +M   GVSP++ T+  ++ G  + R+   A+E+   +   G   
Sbjct: 555 GYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQI 614

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
           + ST+ ++        LT +A ++   +
Sbjct: 615 ELSTYNIILHGLCKNKLTDDALQMFQNL 642



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 187/381 (49%), Gaps = 11/381 (2%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI--HSIMSQVEENGMDPDSIFFN 146
           ++A+ +F+ L+  G   S+      LA +       ++  ++ M++   + + PD   + 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCTYG 91

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I     +G ++        + + G       +  L+KG     +  +++ ++     E
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA---ASGMKPDVVTYNTIATAYAQNGE 263
               PN+ +YN+L++  C+E    EA  ++H MA     G  PDVV+Y T+   + + G+
Sbjct: 152 LGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGD 211

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
           +D+A     EM   G+ P+  T   II+  CK   + +A+    TM + GV P+ + +N 
Sbjct: 212 SDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 271

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           ++ G+          E +  +K+ R   V PDV+TYS +M+     G   + ++IFD M 
Sbjct: 272 ILHGYCS---SGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMT 328

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
           K G+KP+   Y  L +GY  +    +   LL  M+ +G HP+  +F+ +I  + + G +D
Sbjct: 329 KRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVD 388

Query: 441 RAIEVFDKMCEHGVSPNLKTF 461
           +A+ VF KM + G++PN  T+
Sbjct: 389 QAMLVFSKMRQQGLNPNAVTY 409



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 156/336 (46%), Gaps = 6/336 (1%)

Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V   + M+R G   V P+L TY +L+   C    +   +  +  +   G + D + 
Sbjct: 65  PAAAVSRYNRMARAGADEVTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIA 124

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +      +     A ++++  M   G  PN  +  I++ G C E + +EAL     M
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMM 184

Query: 310 KE---YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
            +    G  P++V +  +I GF +  D D        M +  + PDV+TY++I+ A   A
Sbjct: 185 ADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKA 244

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             MDK  E+ + M K G+ PD   Y+ +  GY    +P++A   L  M   G  P+VV +
Sbjct: 245 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTY 304

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           + ++   C +G    A ++FD M + G+ P + T+ TL+ GY+          +L +M  
Sbjct: 305 SLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 364

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            G+HP    F +L  A    G   +A  + SK++ +
Sbjct: 365 NGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQ 400



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 90/354 (25%), Positives = 169/354 (47%), Gaps = 4/354 (1%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           L + G+ ++A   F  +I+ G  P  + Y +L+  L    ++     ++ ++ + G+  +
Sbjct: 416 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 475

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           +IFFN++I++  + G + E+   F  M   G+ P   TYNTLI GY +AGK +E++KLL 
Sbjct: 476 TIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLS 535

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M   G +KPN  TY+ L+  +C    + +A  +  +M +SG+ PD++TYN I     Q 
Sbjct: 536 GMVSVG-LKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGLFQT 594

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
                A+E+ V +  +G Q    T  II+ G CK     +AL+  + +    +      F
Sbjct: 595 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEARTF 654

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N++I   +++   D   ++        + P+  TY  +       G +++  ++F  M  
Sbjct: 655 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 714

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH---PNVVIFTTIISG 432
            G   D+   + + +  ++  E  +A   L  + E  F        +F  ++SG
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 134/267 (50%), Gaps = 1/267 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++  C        +++S  + G+  E++ +F  ++  G KP+++TY TL+    +  + 
Sbjct: 468 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKM 527

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    ++S +   G+ P+++ ++ +IN + +   ME+A+  F +M+ SG++P   TYN +
Sbjct: 528 DEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNII 587

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++G     +   + K L +   E   +  L TYN+++   C  K   +A  +   +    
Sbjct: 588 LQGL-FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMD 646

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           +K +  T+N +  A  + G  D+A+++ V    NG+ PN  T  ++      +G ++E  
Sbjct: 647 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +   +M++ G   +  + N +++  ++
Sbjct: 707 QLFLSMEDNGCTVDSGMLNFIVRELLQ 733


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 212/391 (54%), Gaps = 1/391 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+  F++++  G  P++ TY  L+ AL  +       SI+  +   G  P+ + +N ++ 
Sbjct: 174 ARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 233

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           AF  +G ++ A      M+E GL P   T+N+++ G   AGK E++ K+ D M REG + 
Sbjct: 234 AFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREG-LA 292

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P+  +YN LV  +C      EA +V  +M   G+ PDVVT+ ++     + G  ++A  +
Sbjct: 293 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLERAVTL 352

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + +M   G+Q N  T   +I G+CK+G + +AL   R MK+  + P++V +N LI G+  
Sbjct: 353 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCM 412

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           +   D   E+L  M+   + PDV+TYSTI++A+          E+   M + G+ PDA  
Sbjct: 413 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAIT 472

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YS L +    E+    A  L   MI+ G  P+   +T++I G C +G+++ A+ + DKM 
Sbjct: 473 YSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMV 532

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           + GV P++ T+  L+ G S++ +   A+++L
Sbjct: 533 KAGVLPDVVTYSVLINGLSKSARAMEAQQLL 563



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/519 (29%), Positives = 253/519 (48%), Gaps = 44/519 (8%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G+ PS++ Y  +L AL+      S       +  +G+ P+   +N ++ A    G+ +EA
Sbjct: 151 GYVPSVLAYNAVLLALS-DASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           +     M+ +G  P   TYNTL+  +  AG+ + + +L+ +M REG +KPNL T+N +V 
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMM-REGGLKPNLVTFNSMVN 268

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C    + +A  V  +M   G+ PD V+YNT+   Y + G + +A  V  EM   G+ P
Sbjct: 269 GMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 328

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T   +I   CK G ++ A+   R M+E G+  N V F  LI GF +    D  D +L
Sbjct: 329 DVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD--DALL 386

Query: 342 AL--MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           A+  MK+ R+ P V+ Y+ ++N +   G MD+ +E+  +M   G+KPD   YS +   Y 
Sbjct: 387 AVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 446

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +  +   A EL   M+E G  P+ + ++++I   C +  +  A  +F  M + G+ P+  
Sbjct: 447 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEF 506

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+ +L+ G+ +      A  +   M   GV P   T+ +L       GL+K A+      
Sbjct: 507 TYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVL-----INGLSKSAR------ 555

Query: 520 KNKERTNEMEAEEDIPVESLERLYHKEATTAS--YPNLLQIPNVVSSDQKGSAAALKKG- 576
                   MEA+     + L +LYH++   A+  Y  L+         +  S  AL KG 
Sbjct: 556 -------AMEAQ-----QLLFKLYHEDPIPANTKYDALMH---CCRKAELKSVLALLKGF 600

Query: 577 --RMLLRDAD----SSLECSWFATTSMY--LSHS-CKSG 606
             + L+ +AD    S L+ +W    S+Y  L H  C++G
Sbjct: 601 CMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAG 639



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 204/410 (49%), Gaps = 5/410 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +L  RG  +EA +I  ++   G  P++VTY TL+AA       +    ++  + E G
Sbjct: 196 LVRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGG 255

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ + FN+++N   ++G ME+A   F +M   GL P   +YNTL+ GY  AG   E++
Sbjct: 256 LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEAL 315

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +   M+++G + P++ T+  L+   C   N+  A  ++ +M   G++ + VT+  +   
Sbjct: 316 SVFAEMTQKG-IMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDG 374

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G  D A   +  M+   ++P+      +I+GYC  G++ EA      M+  G+ P+
Sbjct: 375 FCKKGFLDDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPD 434

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V ++ +I  + +  D     E+   M E  V PD ITYS+++        +     +F 
Sbjct: 435 VVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFK 494

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K G++PD   Y+ L  G+ +E   E A  L   M+++G  P+VV ++ +I+G     
Sbjct: 495 NMIKLGLQPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSA 554

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
               A ++  K+      P    ++ LM    +A      + +L ++K F
Sbjct: 555 RAMEAQQLLFKLYHEDPIPANTKYDALMHCCRKA----ELKSVLALLKGF 600



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 224/427 (52%), Gaps = 22/427 (5%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   ++N + + GK ++A+ +F+ ++  G  P  V+Y TL+         +   S+ +++
Sbjct: 262 TFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM 321

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            + G+ PD + F ++I+   ++GN+E A+    +M+E GL     T+  LI G+   G  
Sbjct: 322 TQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFL 381

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++++  +  M ++  +KP++  YN L+  +C    + EA  ++H+M A G+KPDVVTY+T
Sbjct: 382 DDALLAVRGM-KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 440

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           I +AY +N +   A E+  +M   GV P+  T   +I   C E ++ +A    + M + G
Sbjct: 441 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLG 500

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWS-TAGFM 369
           + P+   +  LI G  +      V+  L+L   M +  V PDV+TYS ++N  S +A  M
Sbjct: 501 LQPDEFTYTSLIDGHCK---EGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAM 557

Query: 370 DKCKEIF----DDMGKAGIKPDAHAY--------SILA--KGYVREQEPEKAEELLMTMI 415
           +  + +F    +D   A  K DA  +        S+LA  KG+  +    +A+++  +M+
Sbjct: 558 EAQQLLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSML 617

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           +  ++ +  +++ +I G C  G++ +A+    +M + G +PN  +  +L+ G  E     
Sbjct: 618 DRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVV 677

Query: 476 RAEEILQ 482
            A++++Q
Sbjct: 678 EADQVIQ 684



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/283 (20%), Positives = 114/283 (40%), Gaps = 58/283 (20%)

Query: 58  THCSFCMNKESCR-----TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTT 112
           TH +F +N++           + + L+  L    +  +A  +F N+I+ G +P   TYT+
Sbjct: 451 THSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTS 510

Query: 113 LLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG 172
           L+     +    S  S+  ++ + G+ PD + ++ +IN  S+S    EA    +K+    
Sbjct: 511 LIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHED 570

Query: 173 LTPTTSTYNTL---------------IKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTY 216
             P  + Y+ L               +KG+ + G   E+ K+   ++ R  N+  ++  Y
Sbjct: 571 PIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSV--Y 628

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPD--------------------------VVT 250
           +VL+   C   N+ +A +   +M   G  P+                          ++ 
Sbjct: 629 SVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLN 688

Query: 251 YNTIATAYAQN---------GEADQAEEVIVEMEHNGVQPNGR 284
           Y ++A A A           G  D   +V+  M  +G+ P+ R
Sbjct: 689 YCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPSPR 731


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 242/449 (53%), Gaps = 3/449 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N   + G   +A + ++ +++    P +VTY++++AAL   +  +    +++
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLT 255

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +NG+ P+ + +N++++ +  S   +EA+    KM+  G+ P   TYN+L+      G
Sbjct: 256 TMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNG 315

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G ++P++ TY  L++ +  +  + E   ++  M  +G+ PD   +
Sbjct: 316 RSTEARKIFDSMTKRG-LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVF 374

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  AYA+  + D+A  V  +M  +G+ PN  T G +I   CK G + +A+ +   M +
Sbjct: 375 NILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMID 434

Query: 312 YGVHPNLVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            G+ PN++++  LI     I D+ D  +E++  M +  +  + I +++I+++    G + 
Sbjct: 435 EGLTPNIIVYTSLIHSLC-IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVI 493

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +++FD M + G+KP+   YS L  GY    + ++A +LL +M   G  P+ V + T+I
Sbjct: 494 ESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLI 553

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+C    MD A+ +F +M   GVSPN+ T+  ++ G    R+   A+E+   +   G  
Sbjct: 554 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQ 613

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + ST+ ++        LT EA R+   +
Sbjct: 614 LELSTYNIILHGLCKNNLTDEALRMFQNL 642



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 219/430 (50%), Gaps = 11/430 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAI-FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           + T L+  L    +  +A  I    + E    P + + T LL  L  + R      ++  
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHM 183

Query: 133 VEEN---GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++   G  PD + +  VIN F + G+ ++A  T+ +M +  ++P   TY+++I     
Sbjct: 184 MADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCK 243

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
               ++++++L  M + G V PN  TYN ++  +C+ +   EA   + KM + G++PDVV
Sbjct: 244 GQAMDKAMEVLTTMVKNG-VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVV 302

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN++     +NG + +A ++   M   G++P+  T   ++ GY  +G + E       M
Sbjct: 303 TYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLM 362

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDE---VLALMKEFRVNPDVITYSTIMNAWSTA 366
              G+HP+  +FN+LI  + +   ++ VDE   V + M++  +NP+V+TY  ++     +
Sbjct: 363 VRNGIHPDHHVFNILICAYAK---QEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKS 419

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G +D     F+ M   G+ P+   Y+ L        + +KAEEL++ M++ G   N + F
Sbjct: 420 GSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFF 479

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            +II   C +G +  + ++FD M   GV PN+ T+ TL+ GY  A +   A ++L  M +
Sbjct: 480 NSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFS 539

Query: 487 FGVHPQKSTF 496
            G+ P   T+
Sbjct: 540 VGMKPDCVTY 549



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/465 (24%), Positives = 220/465 (47%), Gaps = 36/465 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + ++ +L +     +A  +   +++ G  P+ +TY ++L      ++       + 
Sbjct: 231 VVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLK 290

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G++PD + +N++++   ++G   EA   F  M + GL P  +TY TL++GY   G
Sbjct: 291 KMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKG 350

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E   LLDLM R G + P+   +N+L+ A+  ++ + EA  V  KM   G+ P+VVTY
Sbjct: 351 ALVEMHALLDLMVRNG-IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTY 409

Query: 252 NTIATAYAQNGEAD-----------------------------------QAEEVIVEMEH 276
             +     ++G  D                                   +AEE+I+EM  
Sbjct: 410 GAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLD 469

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G+  N      II  +CKEG++ E+ +    M   GV PN++ ++ LI G+      D 
Sbjct: 470 RGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDE 529

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             ++L+ M    + PD +TY+T++N +     MD    +F +M  +G+ P+   Y+I+ +
Sbjct: 530 ATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 589

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G    +    A+EL + + +SG    +  +  I+ G C +   D A+ +F  +C   +  
Sbjct: 590 GLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 649

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
             +TF  ++    +  +   A+++   + A G+ P   T+ L+AE
Sbjct: 650 ETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAE 694



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/463 (21%), Positives = 215/463 (46%), Gaps = 38/463 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM+ L + G+  EA+ IF+++ + G +P + TY TLL     +     +H+++ 
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLD 360

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  NG+ PD   FN +I A+++   ++EAM  F KM++ GL P   TY  +I     +G
Sbjct: 361 LMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420

Query: 192 KPEESVKLLDLMSREGNVKPNLRTY----------------------------------- 216
             ++++   + M  EG + PN+  Y                                   
Sbjct: 421 SVDDAMLYFEQMIDEG-LTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFF 479

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N ++ + C E  + E+  +   M   G+KP+V+TY+T+   Y   G+ D+A +++  M  
Sbjct: 480 NSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFS 539

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G++P+  T   +I+GYC+  ++ +AL   + M   GV PN++ +N++++G         
Sbjct: 540 VGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 599

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             E+   + +     ++ TY+ I++        D+   +F ++    ++ +   ++I+  
Sbjct: 600 AKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 659

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
             ++    ++A++L   +  +G  P+V  ++ +       G ++   ++F  M E+G + 
Sbjct: 660 ALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLSMEENGCTA 719

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIM--KAFGVHPQKSTFL 497
           N +   +++    +     RA   L ++  K F +    ++ L
Sbjct: 720 NSRMLNSIVRKLLQRGDITRAGTYLSMIDEKHFSLEASTASLL 762



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/441 (23%), Positives = 201/441 (45%), Gaps = 40/441 (9%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI--HSIMSQVEENGMDPDSIFFN 146
           ++A+ +F  L+  G   S+      LA +       ++  ++ M++     + P    + 
Sbjct: 32  EDARHVFEELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I     +G ++        + + G      T+  L+KG     +  +++ ++     E
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA---ASGMKPDVVTYNTIATAYAQNGE 263
            +  P++ +  +L++  C+E    EA  ++H MA     G  PDVV+Y T+   + + G+
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 264 ADQAE-----------------------------------EVIVEMEHNGVQPNGRTCGI 288
           +D+A                                    EV+  M  NGV PN  T   
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           I+ GYC   + KEA+ F + M+  GV P++V +N L+    +        ++   M +  
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           + PD+ TY T++  ++T G + +   + D M + GI PD H ++IL   Y ++++ ++A 
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            +   M + G +PNVV +  +I   C  GS+D A+  F++M + G++PN+  + +L+   
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451

Query: 469 SEARQPWRAEEILQIMKAFGV 489
               +  +AEE++  M   G+
Sbjct: 452 CIFDKWDKAEELILEMLDRGI 472



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 156/334 (46%), Gaps = 6/334 (1%)

Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V   + M+R G   V P + TY +L+   C    +   +  +  +   G + + +T
Sbjct: 65  PAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAIT 124

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +      +     A ++++  M      P+  +C I++ G C E + +EAL     M
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMM 184

Query: 310 KEY---GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
            +    G  P++V +  +I GF +  D D        M + R++PDV+TYS+I+ A    
Sbjct: 185 ADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             MDK  E+   M K G+ P+   Y+ +  GY   ++P++A   L  M   G  P+VV +
Sbjct: 245 QAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTY 304

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            +++   C +G    A ++FD M + G+ P++ T+ TL+ GY+          +L +M  
Sbjct: 305 NSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVR 364

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            G+HP    F +L  A        EA  + SK++
Sbjct: 365 NGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMR 398



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 6/249 (2%)

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF-VEIMDRDGV 337
           V P   T GI+I   C+ G++         + + G     + F  L+KG   +    D +
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF----DDMGKAGIKPDAHAYSI 393
           D VL  M E    PDV + + ++          +  E+     DD G  G  PD  +Y+ 
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRG-GGSAPDVVSYTT 201

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           +  G+ +E + +KA      M++    P+VV +++II+  C   +MD+A+EV   M ++G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           V PN  T+ +++ GY  + QP  A   L+ M++ GV P   T+  L +     G + EA+
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321

Query: 514 RILSKIKNK 522
           +I   +  +
Sbjct: 322 KIFDSMTKR 330



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/283 (21%), Positives = 142/283 (50%), Gaps = 1/283 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++  C        +++S  + G+  E++ +F+ ++  G KP+++TY+TL+    +  + 
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    ++S +   GM PD + +N +IN +     M++A+  F +M  SG++P   TYN +
Sbjct: 528 DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 587

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++G     +   + +L   +++ G  +  L TYN+++   C      EA  +   +  + 
Sbjct: 588 LQGLFHTRRTAAAKELYVGITKSGT-QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 646

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++ +  T+N +  A  + G  D+A+++   +  NG+ P+ RT  ++     ++G ++E  
Sbjct: 647 LQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELD 706

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
               +M+E G   N  + N +++  ++  D       L+++ E
Sbjct: 707 DLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDE 749


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 228/475 (48%), Gaps = 34/475 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N++   G   EA  I +NL   G KP  VTYT +L +L   +R+  +  +++++  N 
Sbjct: 327 LINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNN 386

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + FN ++ +  + G ++ A++    M E G      TY++++ G    G+ +++V
Sbjct: 387 CAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAV 446

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL  +   G  KP+   Y  +++  C+ +    A  +M +M  S   PD VT+NT+  +
Sbjct: 447 ELLSRLKSYG-CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVAS 505

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             Q G  D+A  V+ +M  NG  P+  T   II G C E  I +A+     ++  G  P+
Sbjct: 506 LCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPD 565

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V FN L+KG   +   +  ++++A M      PD +T++T++ +    G + +  E   
Sbjct: 566 IVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLK 625

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEP--------------------------------- 404
            M + G  P++  YSI+    ++  +                                  
Sbjct: 626 IMAENGCVPNSSTYSIVVDALLKAGKAQAALELLSGMTNGTPDLITYNTVISNLTKAGKM 685

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           E+A +LL  M+ +G  P+   + ++  G C +   DRA+ +  ++ + G+SP+   +  +
Sbjct: 686 EEALDLLRVMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDV 745

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           + G+   R+   A +    M + G  P +ST+++L EA    GL  EAKR+L+ +
Sbjct: 746 LLGFCRDRRTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASL 800



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 219/491 (44%), Gaps = 46/491 (9%)

Query: 68  SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           +C  V     L+  L   G+  +A+ +F  L   G   ++VTY T++       R     
Sbjct: 183 NCPPVVPCNILIKRLCSDGRVSDAERVFAAL---GPSATVVTYNTMVNGYCRAGRIEDAR 239

Query: 128 SIMSQVEENGMD--PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
            ++     NGM   PD+  FN +I A    G + +A+  F  M   G +P+  TY+ L+ 
Sbjct: 240 RLI-----NGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLD 294

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
                    +++ LLD M  +G  +P++ TYNVL+ A CNE ++ EA N++  + + G K
Sbjct: 295 ATCKESGYRQAMALLDEMRAKG-CEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCK 353

Query: 246 PDVVTY-----------------------------------NTIATAYAQNGEADQAEEV 270
           PD VTY                                   NTI T+  Q G  D+A EV
Sbjct: 354 PDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEV 413

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +  M  +G   +  T   I+ G C  G++ +A+     +K YG  P+ + +  ++KG   
Sbjct: 414 VDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCS 473

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
               +  +E++A M      PD +T++T++ +    G +D+   + + M + G  PD   
Sbjct: 474 TEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVT 533

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ +  G   E   + A ELL  +   G  P++V F T++ G C     + A ++   M 
Sbjct: 534 YNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMM 593

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
                P+  TF T++    +     +A E L+IM   G  P  ST+ ++ +A    G  +
Sbjct: 594 RSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQ 653

Query: 511 EAKRILSKIKN 521
            A  +LS + N
Sbjct: 654 AALELLSGMTN 664



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 205/416 (49%), Gaps = 3/416 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ SL ++G    A  + +++ E G    +VTY+++L  L    R +    ++S+++  G
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD+I +  V+     +   E A +   +M  S   P   T+NT++      G  + ++
Sbjct: 457 CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAI 516

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++++ MS  G   P++ TYN ++   CNE  I +A  ++  + + G KPD+VT+NT+   
Sbjct: 517 RVVEQMSENG-CSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKG 575

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                  + AE+++  M  +   P+  T   +I+  C++G + +A+   + M E G  PN
Sbjct: 576 LCGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPN 635

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +++++   ++        E+L+ M      PD+ITY+T+++  + AG M++  ++  
Sbjct: 636 SSTYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLR 693

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G+ PD   Y  LA G  RE   ++A  +L  + ++G  P+   +  ++ G+C D 
Sbjct: 694 VMVSNGLCPDTTTYRSLAYGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDR 753

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
             D AI+ F  M   G  P+  T+  L+   +       A+ +L  + + GV  +K
Sbjct: 754 RTDLAIDCFAHMVSSGCMPDESTYVILLEALAYGGLLDEAKRLLASLCSLGVLDKK 809


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 242/449 (53%), Gaps = 3/449 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N   + G   +A + ++ +++    P +VTY++++AAL   +  +    +++
Sbjct: 196 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLT 255

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +NG+ P+ + +N++++ +  S   +EA+    KM+  G+ P   TYN+L+      G
Sbjct: 256 TMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNG 315

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G ++P++ TY  L++ +  +  + E   ++  M  +G+ PD   +
Sbjct: 316 RSTEARKIFDSMTKRG-LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVF 374

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  AYA+  + D+A  V  +M  +G+ PN  T G +I   CK G + +A+ +   M +
Sbjct: 375 NILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMID 434

Query: 312 YGVHPNLVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            G+ PN++++  LI     I D+ D  +E++  M +  +  + I +++I+++    G + 
Sbjct: 435 EGLTPNIIVYTSLIHSLC-IFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVI 493

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +++FD M + G+KP+   YS L  GY    + ++A +LL +M   G  P+ V + T+I
Sbjct: 494 ESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLI 553

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+C    MD A+ +F +M   GVSPN+ T+  ++ G    R+   A+E+   +   G  
Sbjct: 554 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQ 613

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + ST+ ++        LT EA R+   +
Sbjct: 614 LELSTYNIILHGLCKNNLTDEALRMFQNL 642



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 219/430 (50%), Gaps = 11/430 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAI-FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           + T L+  L    +  +A  I    + E    P + + T LL  L  + R      ++  
Sbjct: 124 TFTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHM 183

Query: 133 VEEN---GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++   G  PD + +  VIN F + G+ ++A  T+ +M +  ++P   TY+++I     
Sbjct: 184 MADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCK 243

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
               ++++++L  M + G V PN  TYN ++  +C+ +   EA   + KM + G++PDVV
Sbjct: 244 GQAMDKAMEVLTTMVKNG-VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVV 302

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN++     +NG + +A ++   M   G++P+  T   ++ GY  +G + E       M
Sbjct: 303 TYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLM 362

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDE---VLALMKEFRVNPDVITYSTIMNAWSTA 366
              G+HP+  +FN+LI  + +   ++ VDE   V + M++  +NP+V+TY  ++     +
Sbjct: 363 VRNGIHPDHHVFNILICAYAK---QEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKS 419

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G +D     F+ M   G+ P+   Y+ L        + +KAEEL++ M++ G   N + F
Sbjct: 420 GSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFF 479

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            +II   C +G +  + ++FD M   GV PN+ T+ TL+ GY  A +   A ++L  M +
Sbjct: 480 NSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFS 539

Query: 487 FGVHPQKSTF 496
            G+ P   T+
Sbjct: 540 VGMKPDCVTY 549



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 122/505 (24%), Positives = 235/505 (46%), Gaps = 36/505 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + ++ +L +     +A  +   +++ G  P+ +TY ++L      ++       + 
Sbjct: 231 VVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLK 290

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G++PD + +N++++   ++G   EA   F  M + GL P  +TY TL++GY   G
Sbjct: 291 KMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKG 350

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E   LLDLM R G + P+   +N+L+ A+  ++ + EA  V  KM   G+ P+VVTY
Sbjct: 351 ALVEMHALLDLMVRNG-IHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTY 409

Query: 252 NTIATAYAQNGEAD-----------------------------------QAEEVIVEMEH 276
             +     ++G  D                                   +AEE+I+EM  
Sbjct: 410 GAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLD 469

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G+  N      II  +CKEG++ E+ +    M   GV PN++ ++ LI G+      D 
Sbjct: 470 RGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDE 529

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             ++L+ M    + PD +TY+T++N +     MD    +F +M  +G+ P+   Y+I+ +
Sbjct: 530 ATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQ 589

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G    +    A+EL + + +SG    +  +  I+ G C +   D A+ +F  +C   +  
Sbjct: 590 GLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQL 649

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
             +TF  ++    +  +   A+++     + G+ P   T+ L+AE     GL +E  ++ 
Sbjct: 650 ETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLF 709

Query: 517 SKIKNKERTNEMEAEEDIPVESLER 541
             +++   T +      I  E L+R
Sbjct: 710 FSMEDNGCTVDSGMLNFIVRELLQR 734



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/441 (23%), Positives = 202/441 (45%), Gaps = 40/441 (9%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI--HSIMSQVEENGMDPDSIFFN 146
           ++A+ +F+ L+  G   S+      LA +       ++  ++ M++     + P    + 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYG 91

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I     +G ++        + + G      T+  L+KG     +  +++ ++     E
Sbjct: 92  ILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA---ASGMKPDVVTYNTIATAYAQNGE 263
            +  P++ +  +L++  C+E    EA  ++H MA     G  PDVV+Y T+   + + G+
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 264 ADQAE-----------------------------------EVIVEMEHNGVQPNGRTCGI 288
           +D+A                                    EV+  M  NGV PN  T   
Sbjct: 212 SDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTYNS 271

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           I+ GYC   + KEA+ F + M+  GV P++V +N L+    +        ++   M +  
Sbjct: 272 ILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRG 331

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           + PD+ TY T++  ++T G + +   + D M + GI PD H ++IL   Y ++++ ++A 
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            +   M + G +PNVV +  +I   C  GS+D A+  F++M + G++PN+  + +L+   
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451

Query: 469 SEARQPWRAEEILQIMKAFGV 489
               +  +AEE++  M   G+
Sbjct: 452 CIFDKWDKAEELILEMLDRGI 472



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 87/334 (26%), Positives = 156/334 (46%), Gaps = 6/334 (1%)

Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V   + M+R G   V P + TY +L+   C    +   +  +  +   G + + +T
Sbjct: 65  PAAAVSRYNRMARAGAGKVTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAIT 124

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +      +     A ++++  M      P+  +C I++ G C E + +EAL     M
Sbjct: 125 FTPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMM 184

Query: 310 KEY---GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
            +    G  P++V +  +I GF +  D D        M + R++PDV+TYS+I+ A    
Sbjct: 185 ADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKG 244

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             MDK  E+   M K G+ P+   Y+ +  GY   ++P++A   L  M   G  P+VV +
Sbjct: 245 QAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTY 304

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            +++   C +G    A ++FD M + G+ P++ T+ TL+ GY+          +L +M  
Sbjct: 305 NSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVR 364

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            G+HP    F +L  A        EA  + SK++
Sbjct: 365 NGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMR 398



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/354 (25%), Positives = 171/354 (48%), Gaps = 4/354 (1%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           L + G   +A   F  +I+ G  P+++ YT+L+ +L I  +++    ++ ++ + G+  +
Sbjct: 416 LCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLN 475

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           +IFFN++I++  + G + E+   F  M   G+ P   TY+TLI GY +AGK +E+ KLL 
Sbjct: 476 TIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLS 535

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M   G +KP+  TYN L+  +C    + +A  +  +M +SG+ P+++TYN I       
Sbjct: 536 SMFSVG-MKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 594

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
                A+E+ V +  +G Q    T  II+ G CK     EALR  + +    +      F
Sbjct: 595 RRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 654

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N++I   +++   D   ++        + P+  TY  +       G +++  ++F  M  
Sbjct: 655 NIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFSMED 714

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH---PNVVIFTTIISG 432
            G   D+   + + +  ++  E  +A   L  + E  F        +F  ++SG
Sbjct: 715 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 768



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 68/249 (27%), Positives = 118/249 (47%), Gaps = 6/249 (2%)

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF-VEIMDRDGV 337
           V P   T GI+I   C+ G++         + + G     + F  L+KG   +    D +
Sbjct: 83  VTPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAM 142

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF----DDMGKAGIKPDAHAYSI 393
           D VL  M E    PDV + + ++          +  E+     DD G  G  PD  +Y+ 
Sbjct: 143 DIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRG-GGSAPDVVSYTT 201

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           +  G+ +E + +KA      M++    P+VV +++II+  C   +MD+A+EV   M ++G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           V PN  T+ +++ GY  + QP  A   L+ M++ GV P   T+  L +     G + EA+
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321

Query: 514 RILSKIKNK 522
           +I   +  +
Sbjct: 322 KIFDSMTKR 330



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 57/267 (21%), Positives = 135/267 (50%), Gaps = 1/267 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++  C        +++S  + G+  E++ +F+ ++  G KP+++TY+TL+    +  + 
Sbjct: 468 LDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKM 527

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    ++S +   GM PD + +N +IN +     M++A+  F +M  SG++P   TYN +
Sbjct: 528 DEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNII 587

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++G     +   + +L   +++ G  +  L TYN+++   C      EA  +   +  + 
Sbjct: 588 LQGLFHTRRTAAAKELYVGITKSGT-QLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 646

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++ +  T+N +  A  + G  D+A+++ V    NG+ PN  T  ++      +G ++E  
Sbjct: 647 LQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 706

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +   +M++ G   +  + N +++  ++
Sbjct: 707 QLFFSMEDNGCTVDSGMLNFIVRELLQ 733


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 220/428 (51%), Gaps = 1/428 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L+N L  + K  +A  +F+ +++ G++P ++TY+T++  L           ++ ++
Sbjct: 49  TFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM 108

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           EE G  P+ + ++ +I++  +   + EAM+   +M   G++P   TY++++ G+   G+ 
Sbjct: 109 EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRS 168

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+  L   M  E NV P+  T+N+LV     E  I EA  V   M   G++P+V TYN 
Sbjct: 169 NEATSLFKQMV-ERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNA 227

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    + D+A+++   M   G  P+ R+  I+I G+CK G+I EA      M    
Sbjct: 228 LMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKA 287

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P+ V ++ L+KGF +        ++L  M+ + + PD++TYS +++     G +D+  
Sbjct: 288 LTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAF 347

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+   M ++ I+P+   Y+IL +G     + E A EL   +   G  P+VV +T +ISG 
Sbjct: 348 ELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGL 407

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G  + A E+F  M  HG  PN  T+  ++ G+        A  +++ M   G     
Sbjct: 408 LKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADS 467

Query: 494 STFLLLAE 501
           STF +L++
Sbjct: 468 STFQMLSD 475



 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 222/450 (49%), Gaps = 3/450 (0%)

Query: 72  VRSMTKLMNSLIERGKPQE--AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           V ++T L+N            A ++  N+ + G +P+ VT++TLL  L+ + +      +
Sbjct: 10  VYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKL 69

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ + G +PD I ++ +IN   + G+   A+    KM+E G  P    Y+T+I     
Sbjct: 70  FDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCK 129

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
                E+++ L  M   G + PN+ TY+ ++  +CN     EA ++  +M    + PD V
Sbjct: 130 DKLITEAMEFLSEMVNRG-ISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTV 188

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           T+N +    ++ G   +A+ V   M   GV+PN  T   ++ GYC + ++ EA +    M
Sbjct: 189 TFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIM 248

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G  P++  +N+LIKG  +    D    +LA M    + PD +TYST+M  +   G  
Sbjct: 249 VRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRP 308

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
              +++ ++M   G+ PD   YSI+  G  ++   ++A ELL  M ES   PN+ I+T +
Sbjct: 309 QDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTIL 368

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G C+ G ++ A E+F  +   G+ P++ T+  ++ G  +      A E+ + M   G 
Sbjct: 369 IQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGC 428

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            P   T+ ++ +     G T  A R++ ++
Sbjct: 429 LPNSCTYNVIIQGFLRNGDTSNAGRLIEEM 458



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 204/393 (51%), Gaps = 1/393 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + ++N L + G    A  +   + E G KP++V Y+T++ +L   K        +S
Sbjct: 82  VITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLS 141

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ P+ + ++++++ F   G   EA   F +M E  + P T T+N L+ G    G
Sbjct: 142 EMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEG 201

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E+  + + M  +G V+PN+ TYN L+  +C++  + EA  + + M   G  P V +Y
Sbjct: 202 MILEAQCVFETMIEKG-VEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSY 260

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   + ++G  D+A+ ++ EM H  + P+  T   ++ G+C++G+ ++A +    M+ 
Sbjct: 261 NILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRS 320

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           YG+ P+L+ +++++ G  +    D   E+L  M+E ++ P++  Y+ ++      G ++ 
Sbjct: 321 YGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEA 380

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +E+F ++   GI+PD   Y+++  G ++     +A EL   M   G  PN   +  II 
Sbjct: 381 ARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQ 440

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           G+  +G    A  + ++M   G S +  TF+ L
Sbjct: 441 GFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 83/312 (26%), Positives = 165/312 (52%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           ++PN  T++ L+    ++  I +A  +  +M   G +PDV+TY+TI     + G    A 
Sbjct: 43  LQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAI 102

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           +++ +ME  G +PN      II   CK+  I EA+ F   M   G+ PN+V ++ ++ GF
Sbjct: 103 QLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGF 162

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
             +   +    +   M E  V PD +T++ +++  S  G + + + +F+ M + G++P+ 
Sbjct: 163 CNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNV 222

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
           + Y+ L  GY  + + ++A++L   M+  G  P+V  +  +I G C  G +D A  +  +
Sbjct: 223 NTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAE 282

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M    ++P+  T+ TLM G+ +  +P  A+++L+ M+++G+ P   T+ ++ +     G 
Sbjct: 283 MSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGH 342

Query: 509 TKEAKRILSKIK 520
             EA  +L  ++
Sbjct: 343 LDEAFELLKAMQ 354



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 168/316 (53%), Gaps = 2/316 (0%)

Query: 208 NVKPNLRTYNVLVRAWC--NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           N++P++ T  +L+  +C  N  +   A++V+  M   G++P+ VT++T+    +   +  
Sbjct: 5   NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A ++  EM   G +P+  T   II+G CK G    A++  + M+E G  PN+V+++ +I
Sbjct: 65  DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
               +        E L+ M    ++P+V+TYS+I++ +   G  ++   +F  M +  + 
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   ++IL  G  +E    +A+ +  TMIE G  PNV  +  ++ G+CS   MD A ++
Sbjct: 185 PDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKL 244

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F+ M   G +P+++++  L+ G+ ++ +   A+ +L  M    + P   T+  L +    
Sbjct: 245 FNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQ 304

Query: 506 TGLTKEAKRILSKIKN 521
            G  ++A+++L ++++
Sbjct: 305 DGRPQDAQKLLEEMRS 320



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 137/289 (47%), Gaps = 2/289 (0%)

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQ--AEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
           M  S ++PDV T   +   +  +       A  V+  M   G+QPN  T   +++G   +
Sbjct: 1   MDLSNIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSK 60

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
            KI +A++    M + G  P+++ ++ +I G  ++       ++L  M+E    P+V+ Y
Sbjct: 61  AKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVY 120

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           STI+++      + +  E   +M   GI P+   YS +  G+       +A  L   M+E
Sbjct: 121 STIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVE 180

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
               P+ V F  ++ G   +G +  A  VF+ M E GV PN+ T+  LM GY    Q   
Sbjct: 181 RNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDE 240

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
           A+++  IM   G  P   ++ +L +    +G   EAK +L+++ +K  T
Sbjct: 241 AQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALT 289


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 236/450 (52%), Gaps = 4/450 (0%)

Query: 72  VRSMTKLMNSLIERGKPQE-AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           V S   ++N L+  G+  + A  +F+ +++ G  P +VTY ++++AL+  +  +    ++
Sbjct: 202 VVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVL 261

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ +NG  P+ I  N++++ +  SG   +A+  F +M   G+ P   TYNTL+      
Sbjct: 262 VRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKN 321

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+  E+ K+ D M + G+ KPN  TY  L+  +  E ++ +  +++  M  +G++PD   
Sbjct: 322 GRSMEARKIFDSMVKRGH-KPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYI 380

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL-RFARTM 309
           +N +   Y ++G+ D A  +  +M   G+ P+  T GI++   C  GK+ +A+ +F R +
Sbjct: 381 FNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLI 440

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            E G+ P+ V+F  LI G       D  +E+   M    + P+ I ++T++N     G +
Sbjct: 441 SE-GLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMV 499

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            + K IFD M +  ++ D   Y+ L  GY    + ++A +LL  M+  G  PN V + T+
Sbjct: 500 ARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTM 559

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I+G+C +G ++ A  +F +M   GV+P + T+ T++ G  +AR+   A+E+   M   G+
Sbjct: 560 INGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGI 619

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKI 519
                T+ ++         T +A RI   +
Sbjct: 620 KFDIGTYNIILLGLCQNNCTDDALRIFQNL 649



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 224/459 (48%), Gaps = 14/459 (3%)

Query: 74  SMTKLMNSLIERGKPQEAQAI-FNNLIEGGHKPSLVTYTTLLAALTIQKR----FNSIHS 128
           + + L+ +L ++ +  EA  I    +   G  P++ +YT LL  L  + R     + +H+
Sbjct: 128 TFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHT 187

Query: 129 IM-SQVEENGMDPDSIFFNAVINAFSESG-NMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
           +M +     G  PD + +N VIN     G  ++ A   F +M + GL+P   TYN++I  
Sbjct: 188 MMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISA 247

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
              A   +++  +L  M + G + PN  T+N L+  +C+     +A  V  +M   G++P
Sbjct: 248 LSKARAMDKAAVVLVRMVKNGAM-PNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEP 306

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           DV TYNT+     +NG + +A ++   M   G +PN  T G ++ GY  EG + +     
Sbjct: 307 DVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLL 366

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAW 363
             M   G+ P+  IFN+LI  + +      VD+ + L  + R   +NPD +TY  +M+A 
Sbjct: 367 DMMVRNGIQPDHYIFNILIGTYTK---HGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDAL 423

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G +D     F  +   G+ PDA  +  L  G     + +KAEEL + MI  G  PN 
Sbjct: 424 CMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNN 483

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           + F T+++  C +G + RA  +FD M    V  ++ T+ TL+ GY    +   A ++L+ 
Sbjct: 484 IFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEG 543

Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           M   GV P + T+  +       G  ++A  +  ++ +K
Sbjct: 544 MVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASK 582



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 215/458 (46%), Gaps = 13/458 (2%)

Query: 71  TVRSMTKLMNSLIE--RGKPQEAQAIFNNLIEGGHK---PSLVTYTTLLAALTIQKRFNS 125
           T  S+  L  +L +  R  P  A ++F  ++        P+L+TY+ ++   +     + 
Sbjct: 50  TTSSIVDLNRALSDAARHSPAVAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLDL 109

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD-TFWKMKESGLTPTTSTYNTLI 184
             + + +V  +G   ++I F+ ++ A  +     EAMD    +M   G TP   +Y  L+
Sbjct: 110 AFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTILL 169

Query: 185 KGYGIAGKPEESVKLLDLM----SREGNVKPNLRTYNVLVRAWCNE-KNITEAWNVMHKM 239
           KG     + ++++ LL  M       G   P++ +YN ++     E + +  A+++  +M
Sbjct: 170 KGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQM 229

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
              G+ PDVVTYN+I +A ++    D+A  V+V M  NG  PN  T   ++ GYC  GK 
Sbjct: 230 LDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKP 289

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            +A+   + M   GV P++  +N L+    +        ++   M +    P+  TY T+
Sbjct: 290 NDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTL 349

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++ ++T G + K   + D M + GI+PD + ++IL   Y +  + + A  L   M   G 
Sbjct: 350 LHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGL 409

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW-RAE 478
           +P+ V +  ++   C  G +D A+  F ++   G++P+   F  L+ G   AR  W +AE
Sbjct: 410 NPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLC-ARDKWDKAE 468

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           E+   M   G+ P    F  L       G+   AK I 
Sbjct: 469 ELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIF 506



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/458 (24%), Positives = 210/458 (45%), Gaps = 46/458 (10%)

Query: 47  SNSKPTDSQPQTHCSFCMNKESCRT-----VRSMTKLMNSLIERGKPQEAQAIFNNLIEG 101
           S+ KP D+         + K  CR      V +   LM  L + G+  EA+ IF+++++ 
Sbjct: 285 SSGKPNDA-------IGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKR 337

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           GHKP+  TY TLL     +     +H ++  +  NG+ PD   FN +I  +++ G +++A
Sbjct: 338 GHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDA 397

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG-------------- 207
           M  F KM+  GL P T TY  ++    + GK ++++     +  EG              
Sbjct: 398 MLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHG 457

Query: 208 --------------------NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
                                + PN   +N L+   C E  +  A N+   M    ++ D
Sbjct: 458 LCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRD 517

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           V+TYNT+   Y  +G+ D+A +++  M  +GV+PN  T   +I+GYCK G+I++A    R
Sbjct: 518 VITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFR 577

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M   GV+P +V ++ +++G  +        E+   M +  +  D+ TY+ I+       
Sbjct: 578 QMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNN 637

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
             D    IF ++       +   ++I+    ++    ++A++L  +++  G  PNVV + 
Sbjct: 638 CTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYW 697

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
            ++      G ++   ++F  + ++G + N +    L+
Sbjct: 698 LMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNALV 735



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 172/342 (50%), Gaps = 1/342 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M++L   GK  +A A F  LI  G  P  V +  L+  L  + +++    +  ++   G
Sbjct: 419 VMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRG 478

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P++IFFN ++N   + G +  A + F  M    +     TYNTLI GY + GK +E+ 
Sbjct: 479 ICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAA 538

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL+ M  +G VKPN  TYN ++  +C    I +A+++  +MA+ G+ P +VTY+TI   
Sbjct: 539 KLLEGMVLDG-VKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQG 597

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             Q      A+E+ + M  +G++ +  T  II+ G C+     +ALR  + +     H  
Sbjct: 598 LFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLE 657

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              FN++I   ++    D   ++ A +    + P+V+TY  +M +    G +++  ++F 
Sbjct: 658 NRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFL 717

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
            + K G   ++   + L    +++ E  KA   L  + E+ F
Sbjct: 718 SLEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNF 759



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 164/359 (45%), Gaps = 11/359 (3%)

Query: 175 PTTSTYNTLIKGYGIAGK--PEESVKLLD--LMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
           PTTS+   L +    A +  P  ++ L    +M     V PNL TY+V++       ++ 
Sbjct: 49  PTTSSIVDLNRALSDAARHSPAVAISLFRRMVMVARPKVPPNLITYSVVIDCCSRVGHLD 108

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV-EMEHNGVQPNGRTCGII 289
            A+  + ++  SG   + +T++ +  A        +A ++ +  M   G  PN  +  I+
Sbjct: 109 LAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNVFSYTIL 168

Query: 290 ISGYCKEGKIKEALRFARTM-----KEYGVHPNLVIFNLLIKGFV-EIMDRDGVDEVLAL 343
           + G C E + ++AL    TM        G  P++V +N +I G + E    D    +   
Sbjct: 169 LKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQ 228

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M +  ++PDV+TY++I++A S A  MDK   +   M K G  P+   ++ L  GY    +
Sbjct: 229 MLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGK 288

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
           P  A  +   M   G  P+V  + T++   C +G    A ++FD M + G  PN  T+ T
Sbjct: 289 PNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGT 348

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           L+ GY+      +   +L +M   G+ P    F +L       G   +A  + SK++ +
Sbjct: 349 LLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQ 407



 Score = 48.5 bits (114), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 27/112 (24%), Positives = 59/112 (52%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+   ++++L++ G+  EA+ +F +L+  G  P++VTY  ++ +L  Q     +  +   
Sbjct: 659 RTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLS 718

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           +E+NG   +S   NA++    + G + +A     K+ E+  +   ST  +L+
Sbjct: 719 LEKNGCTANSRMLNALVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLV 770


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  222 bits (565), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 226/428 (52%), Gaps = 7/428 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ + T L+N L + G+  +A  +F++++  G +P + TYTT++  L       +   ++
Sbjct: 160 TIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLI 219

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ E G  PD + ++ +I++  +   + EA+D F  MK  G++PT  +Y +LI+G    
Sbjct: 220 KKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSF 279

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + +E+  +L+ M+   N+ P++ T+++L+  +C E N+ EA  V+  M   G++P+V+T
Sbjct: 280 SRWKEASAMLNEMTSL-NIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVIT 338

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++   Y+   E  +A ++   M   G +P+  +  I+I+GYC   +I EA +    M 
Sbjct: 339 YNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMI 398

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAG 367
             G+ PN V +  LI  F ++     + E   L K+   N   PD+ TYS ++  +   G
Sbjct: 399 HQGLTPNTVSYTTLIHAFCQL---GKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQG 455

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
           ++ K   +F  M    +KP+   Y+IL     +      A +L   +   G  P+V I+T
Sbjct: 456 YLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYT 515

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           TII+G C +G +D A+E F KM E G  PN  ++  ++ G+ + +   RA +++  M+  
Sbjct: 516 TIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDK 575

Query: 488 GVHPQKST 495
           G    + T
Sbjct: 576 GFVADEGT 583



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 107/445 (24%), Positives = 214/445 (48%), Gaps = 2/445 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIE-GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           KL+++++   +  +A    +  +E  G  P+  T   L+    + +  +   S++++V +
Sbjct: 95  KLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFSVLAKVIK 154

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ P  I F  +IN   ++G   +A++ F  M   G  P   TY T+I G    G+   
Sbjct: 155 LGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAA 214

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  L+  M   G  +P++ TY+ L+ + C ++ + EA ++   M A G+ P VV+Y ++ 
Sbjct: 215 AAGLIKKMGEVG-CQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLI 273

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
                     +A  ++ EM    + P+  T  ++I  +CKEG + EA    +TM E GV 
Sbjct: 274 QGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVE 333

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN++ +N L+ G+   M+     ++  +M      PDV +YS ++N +     +D+ K++
Sbjct: 334 PNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQL 393

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F++M   G+ P+  +Y+ L   + +  +  +A EL   M  +G+ P++  ++ ++ G+C 
Sbjct: 394 FNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCK 453

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G + +A  +F  M    + PNL  +  L+    ++     A ++   +   G+ P    
Sbjct: 454 QGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQI 513

Query: 496 FLLLAEARRATGLTKEAKRILSKIK 520
           +  +       GL  EA     K++
Sbjct: 514 YTTIINGLCKEGLLDEALEAFRKME 538



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 194/416 (46%), Gaps = 37/416 (8%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWK-MKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           P  I FN +++A        +A+ +  K M+ +GL+P T T N LI  + +    +    
Sbjct: 88  PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFS 147

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           +L  + + G ++P + T+  L+   C      +A  +   M A G +PDV TY TI    
Sbjct: 148 VLAKVIKLG-LQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGL 206

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
            + GE   A  +I +M   G QP+  T   +I   CK+  + EAL     MK  G+ P +
Sbjct: 207 CKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTV 266

Query: 319 VIFNLLIKG-------------------------------FVEIMDRDG----VDEVLAL 343
           V +  LI+G                                ++I  ++G       VL  
Sbjct: 267 VSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKT 326

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M E  V P+VITY+++M+ +S    + + +++FD M   G KPD  +YSIL  GY   + 
Sbjct: 327 MTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKR 386

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            ++A++L   MI  G  PN V +TT+I  +C  G +  A E+F  M  +G  P+L T+  
Sbjct: 387 IDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSV 446

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           L+ G+ +     +A  + + M+   + P    + +L ++   +G    A+++ S++
Sbjct: 447 LLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSEL 502



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/406 (23%), Positives = 182/406 (44%), Gaps = 35/406 (8%)

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           +A S   N+++A+ +F  M      P    +N L+       +  ++V  L        +
Sbjct: 63  DASSSFRNIDDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGL 122

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            PN  T N+L+  +C  +++   ++V+ K+   G++P ++T+ T+     + GE  QA E
Sbjct: 123 SPNTCTLNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALE 182

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGK------------------------------- 298
           +  +M   G QP+  T   II+G CK G+                               
Sbjct: 183 LFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLC 242

Query: 299 ----IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
               + EAL     MK  G+ P +V +  LI+G            +L  M    + PD++
Sbjct: 243 KDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIV 302

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           T+S +++ +   G + + + +   M + G++P+   Y+ L  GY  + E  +A +L   M
Sbjct: 303 TFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVM 362

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           I  G  P+V  ++ +I+G+C    +D A ++F++M   G++PN  ++ TL+  + +  + 
Sbjct: 363 ITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKL 422

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
             A E+ + M   G  P   T+ +L E     G   +A R+   ++
Sbjct: 423 REARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQ 468



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 1/173 (0%)

Query: 351 PDVITYSTIMNAW-STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
           P +I ++ +++A      + D    +   M  AG+ P+    +IL   +   Q  +    
Sbjct: 88  PCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNILINCFCLMQHVDLGFS 147

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +L  +I+ G  P ++ FTT+I+G C  G   +A+E+FD M   G  P++ T+ T++ G  
Sbjct: 148 VLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLC 207

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +  +   A  +++ M   G  P   T+  L ++     L  EA  I S +K K
Sbjct: 208 KMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAK 260


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 213/429 (49%), Gaps = 1/429 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A  +FN + + G +P+ VTY+TL+  L    R N    ++ ++  +G+ P +      I 
Sbjct: 269 ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           A  + G  E+A   F  MK  G  P   TY  LI G  ++G  + ++ L   MSR+G V 
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG-VF 387

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN  TYN L+      + I  A+ V++ M  +G  P++VTYN +   Y   G+  +A  V
Sbjct: 388 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV 447

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +  M   G   N  T   II GYC  G    ALR    M++ G  P+   +  LI GF +
Sbjct: 448 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 507

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           I   +    +   M +  + P+ +TY+ +++ +     +D    + + M ++G +P+   
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y++L  G  ++     AEEL   MIE G  PNVV +T +I G C +GS   A+E+F+KM 
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E G  PNL T+ +L+    +  +   AE +   ++  G+ P + T++ + EA   +G  +
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687

Query: 511 EAKRILSKI 519
            A   L ++
Sbjct: 688 HAFNFLGRM 696



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 202/397 (50%), Gaps = 1/397 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  + T  + +L + G  ++A  +F ++   G +P++ TYT L++ L +         + 
Sbjct: 319 TAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLF 378

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  +G+ P+++ +NA+IN   E+  ++ A      M  +G +P   TYN +IKGY I 
Sbjct: 379 HRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCIL 438

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G P++++ +++ M + G+   NL TYN +++ +C+  N T A  ++  M   G KPD  +
Sbjct: 439 GDPKKAMLVMNNMLQRGH-SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 497

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +   + +  + + A  +  EM  +G+ PN  T   +I GYCK+ K+  A      MK
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PN+  +N+LI G  +  +  G +E+  +M E  + P+V+TY+ +++     G   
Sbjct: 558 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              E+F+ M + G  P+   YS L +   +E + E+AE L   +   G  P+ + +  +I
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +   G ++ A     +M + G  P L T+  L+ G
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 204/437 (46%), Gaps = 2/437 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M KE C     + + L+N L + G+  EA  +   +I  G  P+  T T  + AL     
Sbjct: 276 MAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGC 335

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +     +   ++  G +P+   + A+I+    SG ++ A+  F +M   G+ P T TYN 
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNA 395

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI       + + +  +L+LM R G   PN+ TYN +++ +C   +  +A  VM+ M   
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNG-CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G   ++VTYNTI   Y  +G    A  ++  M   G +P+  +   +I G+CK  K++ A
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M + G+ PN V +  LI G+ +    D    +L  MK     P+V TY+ +++ 
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
            +        +E+   M + GI P+   Y+ +  G  +      A E+   MIE G  PN
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           ++ ++++I     +G ++ A  +F ++  HG+ P+  T+  ++  Y  + +   A   L 
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694

Query: 483 IMKAFGVHPQKSTFLLL 499
            M   G  P   T+ +L
Sbjct: 695 RMIKAGCQPTLWTYGVL 711



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 111/462 (24%), Positives = 198/462 (42%), Gaps = 71/462 (15%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK------------------ 169
           S +  + ++G+      ++A++   S  G     MD + +M                   
Sbjct: 166 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225

Query: 170 -----------------ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
                            ES ++P T TY ++I G+      + ++++ + M++EG  +PN
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG-CEPN 284

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
             TY+ L+   C+   + EA++++ +M   G+ P   T      A    G  + A  + V
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE-- 330
           +M++ G +PN  T   +ISG C  G +K A+     M   GV PN V +N LI   VE  
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 404

Query: 331 ----------IMDRDGVDEVLA----LMKEFRVNPD-------------------VITYS 357
                     +M R+G    +     ++K + +  D                   ++TY+
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           TI+  +  +G       I D M   G KPD  +Y+ L  G+ +  + E A  L   M++ 
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  PN V +T +I G+C D  +D A  + + M   G  PN++T+  L+ G ++      A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           EE+ ++M   G+ P   T+  + +     G T  A  + +K+
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 124/518 (23%), Positives = 203/518 (39%), Gaps = 62/518 (11%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G P++A  + NN+++ GH  +LVTY T++          S   I+  + + G  PD   +
Sbjct: 439 GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             +I  F +   ME A   F +M + GL P   TY  LI GY    K + +  LL+ M R
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 206 EGNVKPNLRTYNVLVRAW-----------------------------------CNEKNIT 230
            G  +PN++TYNVL+                                      C   + +
Sbjct: 559 SG-CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
            A  + +KM   G  P+++TY+++  A  Q G+ ++AE +  E+E +G+ P+  T   +I
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------------------- 328
             Y   GK++ A  F   M + G  P L  + +LIKG                       
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 737

Query: 329 --VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
              +  D+D V  + A + E      V   + +++  STAG   +  E+   M   G+ P
Sbjct: 738 FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 797

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D  AY+ L    +R +  + A  +   M   G   ++  +  +I   C       A   F
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           + M     +P+      L+ G           E L IM+     P    + +LA      
Sbjct: 858 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREASKK 917

Query: 507 GLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYH 544
              K     ++K+K    T            SL RLY+
Sbjct: 918 RSWKHVAGCITKVKRA--TCSTSCTGQCFCSSLSRLYY 953



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 155/339 (45%), Gaps = 1/339 (0%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           M   M     + +SGL      Y+ L+      G     +     M  EG V+PNL  YN
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG-VQPNLLIYN 219

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++ A C + N+ +A  +M K+  S M PD  TY ++   + +  + D A +V  +M   
Sbjct: 220 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G +PN  T   +I+G C  G++ EA    R M  +G+ P        I    ++   +  
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
             +   MK     P+V TY+ +++    +G +     +F  M + G+ P+   Y+ L   
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
            V  +  + A  +L  M  +G  PN+V +  +I G+C  G   +A+ V + M + G S N
Sbjct: 400 LVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSAN 459

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           L T+ T++ GY ++     A  IL +M+  G  P + ++
Sbjct: 460 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/485 (23%), Positives = 200/485 (41%), Gaps = 61/485 (12%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  + C   V + T L++ L   G  + A  +F+ +   G  P+ VTY  L+  L   +R
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +++ +  NG  P+ + +N +I  +   G+ ++AM     M + G +    TYNT
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKP------------------------------- 211
           +IKGY  +G    ++++LDLM R+G  KP                               
Sbjct: 466 IIKGYCDSGNTTSALRILDLM-RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524

Query: 212 ----NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
               N  TY  L+  +C ++ +  A +++  M  SG +P+V TYN +     +      A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
           EE+   M   G+ PN  T   +I G CK G    AL     M E G  PNL+ ++ LI+ 
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             +    +  + + A ++   + PD ITY  ++ A+  +G ++        M KAG +P 
Sbjct: 645 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 704

Query: 388 AHAYSILAKGYVRE----------------------QEPEKAEELLMTMIESGFHP--NV 423
              Y +L KG   E                      Q  ++    +M+   +   P  +V
Sbjct: 705 LWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSV 764

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
            +   ++S   + G    A E+   M   G+ P+ + + +L+      R    A  + + 
Sbjct: 765 QVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKH 824

Query: 484 MKAFG 488
           M   G
Sbjct: 825 MSTQG 829



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 149/330 (45%), Gaps = 7/330 (2%)

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            ++  LD++S+ G ++  L  Y+ L+             +  H+M + G++P+++ YN +
Sbjct: 163 RTMSFLDMLSQSG-LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             A  ++G    AE ++ ++  + + P+  T   +I G+C++  +  AL+    M + G 
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDK 371
            PN V ++ LI G     D   V+E   L++E  ++   P   T +  + A    G  + 
Sbjct: 282 EPNTVTYSTLINGLC---DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F DM   G +P+ + Y+ L  G       + A  L   M   G  PN V +  +I+
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
               +  +  A  V + M  +G SPN+ T+  ++ GY     P +A  ++  M   G   
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKN 521
              T+  + +    +G T  A RIL  +++
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRD 488



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 125/278 (44%)

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L+++  +++ +    + +  ++ SG++  +  Y+ +    ++ G      +    M   G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           VQPN      +I+  CK+G + +A    + + E  + P+   +  +I G     D D   
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           +V   M +    P+ +TYST++N    +G +++  ++  +M   GI P AH  +      
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
                 E A  L + M   G  PNV  +T +ISG C  G +  AI +F +M   GV PN 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            T+  L+    E R+   A  +L +M   G  P   T+
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTY 428



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 143/348 (41%), Gaps = 58/348 (16%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++ L + G    A  +FN +IE G  P+L+TY++L+ AL  + +     ++ +
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG----- 186
           ++E +G+ PD I +  +I A+  SG +E A +   +M ++G  PT  TY  LIKG     
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEY 719

Query: 187 ------------------YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
                             +G     +++V ++     E +   +++  N LV        
Sbjct: 720 LLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGR 779

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
             EA  ++  M + G+ PD   YN++  +  +    D A  V   M   G + +      
Sbjct: 780 WFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +I   C+  + KEA               +   N+L++ +                    
Sbjct: 840 LICALCQLHRRKEA--------------RITFENMLMRTW-------------------- 865

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            NPD +  + +++     G+ D C E    M      P  H Y+ILA+
Sbjct: 866 -NPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 912


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 213/429 (49%), Gaps = 1/429 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A  +FN + + G +P+ VTY+TL+  L    R N    ++ ++  +G+ P +      I 
Sbjct: 269 ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           A  + G  E+A   F  MK  G  P   TY  LI G  ++G  + ++ L   MSR+G V 
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG-VF 387

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN  TYN L+      + I  A+ V++ M  +G  P++VTYN +   Y   G+  +A  V
Sbjct: 388 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV 447

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +  M   G   N  T   II GYC  G    ALR    M++ G  P+   +  LI GF +
Sbjct: 448 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 507

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           I   +    +   M +  + P+ +TY+ +++ +     +D    + + M ++G +P+   
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y++L  G  ++     AEEL   MIE G  PNVV +T +I G C +GS   A+E+F+KM 
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E G  PNL T+ +L+    +  +   AE +   ++  G+ P + T++ + EA   +G  +
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687

Query: 511 EAKRILSKI 519
            A   L ++
Sbjct: 688 HAFNFLGRM 696



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 202/397 (50%), Gaps = 1/397 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  + T  + +L + G  ++A  +F ++   G +P++ TYT L++ L +         + 
Sbjct: 319 TAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLF 378

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  +G+ P+++ +NA+IN   E+  ++ A      M  +G +P   TYN +IKGY I 
Sbjct: 379 HRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCIL 438

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G P++++ +++ M + G+   NL TYN +++ +C+  N T A  ++  M   G KPD  +
Sbjct: 439 GDPKKAMLVMNNMLQRGH-SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 497

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +   + +  + + A  +  EM  +G+ PN  T   +I GYCK+ K+  A      MK
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PN+  +N+LI G  +  +  G +E+  +M E  + P+V+TY+ +++     G   
Sbjct: 558 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              E+F+ M + G  P+   YS L +   +E + E+AE L   +   G  P+ + +  +I
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +   G ++ A     +M + G  P L T+  L+ G
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 204/437 (46%), Gaps = 2/437 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M KE C     + + L+N L + G+  EA  +   +I  G  P+  T T  + AL     
Sbjct: 276 MAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGC 335

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +     +   ++  G +P+   + A+I+    SG ++ A+  F +M   G+ P T TYN 
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNA 395

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI       + + +  +L+LM R G   PN+ TYN +++ +C   +  +A  VM+ M   
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNG-CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G   ++VTYNTI   Y  +G    A  ++  M   G +P+  +   +I G+CK  K++ A
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M + G+ PN V +  LI G+ +    D    +L  MK     P+V TY+ +++ 
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
            +        +E+   M + GI P+   Y+ +  G  +      A E+   MIE G  PN
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           ++ ++++I     +G ++ A  +F ++  HG+ P+  T+  ++  Y  + +   A   L 
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694

Query: 483 IMKAFGVHPQKSTFLLL 499
            M   G  P   T+ +L
Sbjct: 695 RMIKAGCQPTLWTYGVL 711



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/462 (24%), Positives = 197/462 (42%), Gaps = 71/462 (15%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK------------------ 169
           S +  + ++G+      ++A++   S  G     MD + +M                   
Sbjct: 166 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225

Query: 170 -----------------ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
                            ES ++P T TY ++I G+      + ++++ + M++EG  +PN
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG-CEPN 284

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
             TY+ L+   C+   + EA++++ +M   G+ P   T      A    G  + A  + V
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE-- 330
           +M++ G +PN  T   +ISG C  G +K A+     M   GV PN V +N LI   VE  
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 404

Query: 331 ----------IMDRDGVDE-----------------------VLALMKEFRVNPDVITYS 357
                     +M R+G                          V+  M +   + +++TY+
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           TI+  +  +G       I D M   G KPD  +Y+ L  G+ +  + E A  L   M++ 
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  PN V +T +I G+C D  +D A  + + M   G  PN++T+  L+ G ++      A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           EE+ ++M   G+ P   T+  + +     G T  A  + +K+
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 155/339 (45%), Gaps = 1/339 (0%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           M   M     + +SGL      Y+ L+      G     +     M  EG V+PNL  YN
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG-VQPNLLIYN 219

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++ A C + N+ +A  +M K+  S M PD  TY ++   + +  + D A +V  +M   
Sbjct: 220 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G +PN  T   +I+G C  G++ EA    R M  +G+ P        I    ++   +  
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
             +   MK     P+V TY+ +++    +G +     +F  M + G+ P+   Y+ L   
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 399

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
            V  +  + A  +L  M  +G  PN+V +  +I G+C  G   +A+ V + M + G S N
Sbjct: 400 LVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSAN 459

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           L T+ T++ GY ++     A  IL +M+  G  P + ++
Sbjct: 460 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/475 (24%), Positives = 190/475 (40%), Gaps = 60/475 (12%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G P++A  + NN+++ GH  +LVTY T++          S   I+  + + G  PD   +
Sbjct: 439 GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             +I  F +   ME A   F +M + GL P   TY  LI GY    K + +  LL+ M R
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 206 EGNVKPNLRTYNVLVRAW-----------------------------------CNEKNIT 230
            G  +PN++TYNVL+                                      C   + +
Sbjct: 559 SG-CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
            A  + +KM   G  P+++TY+++  A  Q G+ ++AE +  E+E +G+ P+  T   +I
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------------------- 328
             Y   GK++ A  F   M + G  P L  + +LIKG                       
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 737

Query: 329 --VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
              +  D+D V  + A + E      V   + +++  STAG   +  E+   M   G+ P
Sbjct: 738 FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 797

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D  AY+ L    +R +  + A  +   M   G   ++  +  +I   C       A   F
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           + M     +P+      L+ G           E L IM+     P    + +LA 
Sbjct: 858 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 912



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/485 (23%), Positives = 200/485 (41%), Gaps = 61/485 (12%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  + C   V + T L++ L   G  + A  +F+ +   G  P+ VTY  L+  L   +R
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +++ +  NG  P+ + +N +I  +   G+ ++AM     M + G +    TYNT
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKP------------------------------- 211
           +IKGY  +G    ++++LDLM R+G  KP                               
Sbjct: 466 IIKGYCDSGNTTSALRILDLM-RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524

Query: 212 ----NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
               N  TY  L+  +C ++ +  A +++  M  SG +P+V TYN +     +      A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
           EE+   M   G+ PN  T   +I G CK G    AL     M E G  PNL+ ++ LI+ 
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             +    +  + + A ++   + PD ITY  ++ A+  +G ++        M KAG +P 
Sbjct: 645 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 704

Query: 388 AHAYSILAKGYVRE----------------------QEPEKAEELLMTMIESGFHP--NV 423
              Y +L KG   E                      Q  ++    +M+   +   P  +V
Sbjct: 705 LWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSV 764

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
            +   ++S   + G    A E+   M   G+ P+ + + +L+      R    A  + + 
Sbjct: 765 QVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKH 824

Query: 484 MKAFG 488
           M   G
Sbjct: 825 MSTQG 829



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 149/330 (45%), Gaps = 7/330 (2%)

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            ++  LD++S+ G ++  L  Y+ L+             +  H+M + G++P+++ YN +
Sbjct: 163 RTMSFLDMLSQSG-LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             A  ++G    AE ++ ++  + + P+  T   +I G+C++  +  AL+    M + G 
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDK 371
            PN V ++ LI G     D   V+E   L++E  ++   P   T +  + A    G  + 
Sbjct: 282 EPNTVTYSTLINGLC---DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F DM   G +P+ + Y+ L  G       + A  L   M   G  PN V +  +I+
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
               +  +  A  V + M  +G SPN+ T+  ++ GY     P +A  ++  M   G   
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKN 521
              T+  + +    +G T  A RIL  +++
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRD 488



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 125/278 (44%)

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L+++  +++ +    + +  ++ SG++  +  Y+ +    ++ G      +    M   G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           VQPN      +I+  CK+G + +A    + + E  + P+   +  +I G     D D   
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           +V   M +    P+ +TYST++N    +G +++  ++  +M   GI P AH  +      
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
                 E A  L + M   G  PNV  +T +ISG C  G +  AI +F +M   GV PN 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 390

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            T+  L+    E R+   A  +L +M   G  P   T+
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTY 428



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 143/348 (41%), Gaps = 58/348 (16%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++ L + G    A  +FN +IE G  P+L+TY++L+ AL  + +     ++ +
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG----- 186
           ++E +G+ PD I +  +I A+  SG +E A +   +M ++G  PT  TY  LIKG     
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEY 719

Query: 187 ------------------YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
                             +G     +++V ++     E +   +++  N LV        
Sbjct: 720 LLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGR 779

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
             EA  ++  M + G+ PD   YN++  +  +    D A  V   M   G + +      
Sbjct: 780 WFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +I   C+  + KEA               +   N+L++ +                    
Sbjct: 840 LICALCQLHRRKEA--------------RITFENMLMRTW-------------------- 865

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            NPD +  + +++     G+ D C E    M      P  H Y+ILA+
Sbjct: 866 -NPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 912


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 220/445 (49%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ S  ++GK ++   +F  +++ G  P  + Y  L+     + R +  + +  ++   G
Sbjct: 14  VLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVG 73

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++P    +N+++NAF +   M+EAM+ F  M E G  P   TY+T+I G    GK  E++
Sbjct: 74  LEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEAL 133

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L     E     N   YN L+   C ++NI  A+ ++ +MA+ G  PD +TYNTI + 
Sbjct: 134 EMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSG 193

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+  +A++    M   G  P+      ++    KEGK  EA++  + +   G  P+
Sbjct: 194 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPD 253

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +N ++ G     + D  +E+   M      P+  TYS +++    A  +D   ++ +
Sbjct: 254 TVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLE 313

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K G  PD   Y+IL  G  +    +KA EL  TM+++G  P++V ++ +++G C   
Sbjct: 314 EMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTN 373

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +  A  +FD+M E  + P++ TF  LM G  +A +   A+++L  M   G  P    + 
Sbjct: 374 KVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYN 433

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L    R  G   +A R+   +K K
Sbjct: 434 TLMNGLRKQGRHIQADRLTQAMKEK 458



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 202/412 (49%), Gaps = 2/412 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   ++G+  EA  ++  ++  G +PS+ TY +LL A   + +      +   + E G
Sbjct: 49  LIDGYAKKGRVDEANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKG 108

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDT-FWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            +PD + ++ +I+   ++G + EA++  F KM E G +  T  YN LI G       E +
Sbjct: 109 FEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERA 168

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            KLL+ M+ +G V  N+ TYN ++   C    ++EA      M + G  PDVV YN +  
Sbjct: 169 YKLLEEMASKGYVPDNI-TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLD 227

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A  + G+ D+A ++  ++   G  P+  T   I+ G  ++  + EA    + M   G  P
Sbjct: 228 ALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAP 287

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N   +++++ G       D   +VL  M +    PDV+TY+ +++       +DK  E+F
Sbjct: 288 NGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELF 347

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             M   G  PD  +YS++  G  +  +   A  L   MIE    P+VV F  ++ G C  
Sbjct: 348 STMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKA 407

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           G +D A ++ D+M   G +P+   + TLM G  +  +  +A+ + Q MK  G
Sbjct: 408 GKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKG 459



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 220/420 (52%), Gaps = 10/420 (2%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P+  T+  +L +   Q +    + +  Q+ +NG+ PD I +N +I+ +++ G ++EA   
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           + +M   GL P+  TYN+L+  +    K +E+++L   M+ +G  +P++ TY+ ++   C
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKG-FEPDVVTYSTIISGLC 124

Query: 225 NEKNITEAWNVM-HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
               +TEA  ++ HKM   G   + V YN +     ++   ++A +++ EM   G  P+ 
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLA 342
            T   I+SG C+ GK+ EA +F  +M   G  P++V +N    G ++ + ++G  DE + 
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYN----GLLDALYKEGKTDEAMK 240

Query: 343 LMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           L K+       PD +TY++I+   +    MD+ +E+F  M  +G  P+   YSI+  G+ 
Sbjct: 241 LFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHC 300

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           R ++ + A ++L  M + G  P+VV +  ++ G C    +D+A E+F  M ++G +P++ 
Sbjct: 301 RAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIV 360

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           ++  ++ G  +  +   A  +   M    + P   TF +L +     G   EAK +L ++
Sbjct: 361 SYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQM 420



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 192/422 (45%), Gaps = 51/422 (12%)

Query: 34  AKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQA 93
           AKK    E  +LY        +P              ++ +   L+N+  +  K +EA  
Sbjct: 54  AKKGRVDEANRLYEEMVSVGLEP--------------SIYTYNSLLNAFCKETKMKEAME 99

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAF 152
           +F  + E G +P +VTY+T+++ L    K   ++  +  ++ E G   +++ +NA+IN  
Sbjct: 100 LFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGL 159

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
            +  N+E A     +M   G  P   TYNT++ G    GK  E+ +  D M   G   P+
Sbjct: 160 CKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRG-YSPD 218

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
           +  YN L+ A   E    EA  +   + A G  PD VTYN+I    A+    D+AEE+  
Sbjct: 219 VVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK 278

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           +M  +G  PNG T  I++SG+C+  K+ +A +    M + G  P++V +N+L+ G  +  
Sbjct: 279 KMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTN 338

Query: 333 DRDGVDEVLALMK-----------------------------------EFRVNPDVITYS 357
             D   E+ + M                                    E ++ PDV+T++
Sbjct: 339 LVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFN 398

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +M+    AG +D+ K++ D M  +G  PD  AY+ L  G  ++    +A+ L   M E 
Sbjct: 399 ILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEK 458

Query: 418 GF 419
           GF
Sbjct: 459 GF 460



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 90/209 (43%), Gaps = 36/209 (17%)

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV---------- 399
           +P+  T+  ++ ++   G +    ++F+ M   GI PD   Y+IL  GY           
Sbjct: 5   SPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANR 64

Query: 400 -------------------------REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
                                    +E + ++A EL  TM E GF P+VV ++TIISG C
Sbjct: 65  LYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLC 124

Query: 435 SDGSMDRAIE-VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
             G +  A+E +F KM E G S N   +  L+ G  +     RA ++L+ M + G  P  
Sbjct: 125 KTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDN 184

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK 522
            T+  +       G   EAK+    + ++
Sbjct: 185 ITYNTILSGLCRMGKVSEAKQFFDSMPSR 213



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 35/152 (23%), Positives = 65/152 (42%), Gaps = 15/152 (9%)

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN   F  ++  +C  G +    ++F++M ++G+SP+   +  L+ GY++  +   A  +
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI------ 534
            + M + G+ P   T+  L  A       KEA  +   +  K    ++     I      
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 535 ---PVESLERLYHK------EATTASYPNLLQ 557
                E+LE L+HK       A T +Y  L+ 
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALIN 157


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 213/429 (49%), Gaps = 1/429 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A  +FN + + G +P+ VTY+TL+  L    R N    ++ ++  +G+ P +      I 
Sbjct: 269 ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           A  + G  E+A   F  MK  G  P   TY  LI G  ++G  + ++ L   MSR+G V 
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDG-VF 387

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN  TYN L+      + I  A+ V++ M  +G  P++VTYN +   Y   G+  +A  V
Sbjct: 388 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLV 447

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +  M   G   N  T   II GYC  G    ALR    M++ G  P+   +  LI GF +
Sbjct: 448 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 507

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           I   +    +   M +  + P+ +TY+ +++ +     +D    + + M ++G +P+   
Sbjct: 508 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 567

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y++L  G  ++     AEEL   MIE G  PNVV +T +I G C +GS   A+E+F+KM 
Sbjct: 568 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 627

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E G  PNL T+ +L+    +  +   AE +   ++  G+ P + T++ + EA   +G  +
Sbjct: 628 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 687

Query: 511 EAKRILSKI 519
            A   L ++
Sbjct: 688 HAFNFLGRM 696



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 202/397 (50%), Gaps = 1/397 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  + T  + +L + G  ++A  +F ++   G +P++ TYT L++ L +         + 
Sbjct: 319 TAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLF 378

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  +G+ P+++ +NA+IN   E+  ++ A      M  +G +P   TYN +IKGY I 
Sbjct: 379 HRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCIL 438

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G P++++ +++ M + G+   NL TYN +++ +C+  N T A  ++  M   G KPD  +
Sbjct: 439 GDPKKAMLVMNNMLQRGH-SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 497

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +   + +  + + A  +  EM  +G+ PN  T   +I GYCK+ K+  A      MK
Sbjct: 498 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 557

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PN+  +N+LI G  +  +  G +E+  +M E  + P+V+TY+ +++     G   
Sbjct: 558 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              E+F+ M + G  P+   YS L +   +E + E+AE L   +   G  P+ + +  +I
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +   G ++ A     +M + G  P L T+  L+ G
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 714



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 204/437 (46%), Gaps = 2/437 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M KE C     + + L+N L + G+  EA  +   +I  G  P+  T T  + AL     
Sbjct: 276 MAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGC 335

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +     +   ++  G +P+   + A+I+    SG ++ A+  F +M   G+ P T TYN 
Sbjct: 336 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNA 395

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI       + + +  +L+LM R G   PN+ TYN +++ +C   +  +A  VM+ M   
Sbjct: 396 LINILVENRRIKYAFVVLNLMGRNG-CSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 454

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G   ++VTYNTI   Y  +G    A  ++  M   G +P+  +   +I G+CK  K++ A
Sbjct: 455 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 514

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M + G+ PN V +  LI G+ +    D    +L  MK     P+V TY+ +++ 
Sbjct: 515 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 574

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
            +        +E+   M + GI P+   Y+ +  G  +      A E+   MIE G  PN
Sbjct: 575 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 634

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           ++ ++++I     +G ++ A  +F ++  HG+ P+  T+  ++  Y  + +   A   L 
Sbjct: 635 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 694

Query: 483 IMKAFGVHPQKSTFLLL 499
            M   G  P   T+ +L
Sbjct: 695 RMIKAGCQPTLWTYGVL 711



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/462 (24%), Positives = 197/462 (42%), Gaps = 71/462 (15%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK------------------ 169
           S +  + ++G+      ++A++   S  G     MD + +M                   
Sbjct: 166 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 225

Query: 170 -----------------ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
                            ES ++P T TY ++I G+      + ++++ + M++EG  +PN
Sbjct: 226 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG-CEPN 284

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
             TY+ L+   C+   + EA++++ +M   G+ P   T      A    G  + A  + V
Sbjct: 285 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 344

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE-- 330
           +M++ G +PN  T   +ISG C  G +K A+     M   GV PN V +N LI   VE  
Sbjct: 345 DMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 404

Query: 331 ----------IMDRDGVDE-----------------------VLALMKEFRVNPDVITYS 357
                     +M R+G                          V+  M +   + +++TY+
Sbjct: 405 RIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 464

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           TI+  +  +G       I D M   G KPD  +Y+ L  G+ +  + E A  L   M++ 
Sbjct: 465 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  PN V +T +I G+C D  +D A  + + M   G  PN++T+  L+ G ++      A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           EE+ ++M   G+ P   T+  + +     G T  A  + +K+
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 626



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 155/339 (45%), Gaps = 1/339 (0%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           M   M     + +SGL      Y+ L+      G     +     M  EG V+PNL  YN
Sbjct: 161 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG-VQPNLLIYN 219

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++ A C + N+ +A  +M K+  S M PD  TY ++   + +  + D A +V  +M   
Sbjct: 220 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 279

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G +PN  T   +I+G C  G++ EA    R M  +G+ P        I    ++   +  
Sbjct: 280 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 339

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
             +   MK     P+V TY+ +++    +G +     +F  M + G+ P+   Y+ L   
Sbjct: 340 WRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINI 399

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
            V  +  + A  +L  M  +G  PN+V +  +I G+C  G   +A+ V + M + G S N
Sbjct: 400 LVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSAN 459

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           L T+ T++ GY ++     A  IL +M+  G  P + ++
Sbjct: 460 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/475 (24%), Positives = 190/475 (40%), Gaps = 60/475 (12%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G P++A  + NN+++ GH  +LVTY T++          S   I+  + + G  PD   +
Sbjct: 439 GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 498

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             +I  F +   ME A   F +M + GL P   TY  LI GY    K + +  LL+ M R
Sbjct: 499 TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 558

Query: 206 EGNVKPNLRTYNVLVRAW-----------------------------------CNEKNIT 230
            G  +PN++TYNVL+                                      C   + +
Sbjct: 559 SG-CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 617

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
            A  + +KM   G  P+++TY+++  A  Q G+ ++AE +  E+E +G+ P+  T   +I
Sbjct: 618 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 677

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------------------- 328
             Y   GK++ A  F   M + G  P L  + +LIKG                       
Sbjct: 678 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 737

Query: 329 --VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
              +  D+D V  + A + E      V   + +++  STAG   +  E+   M   G+ P
Sbjct: 738 FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 797

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D  AY+ L    +R +  + A  +   M   G   ++  +  +I   C       A   F
Sbjct: 798 DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 857

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           + M     +P+      L+ G           E L IM+     P    + +LA 
Sbjct: 858 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 912



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 115/485 (23%), Positives = 200/485 (41%), Gaps = 61/485 (12%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  + C   V + T L++ L   G  + A  +F+ +   G  P+ VTY  L+  L   +R
Sbjct: 346 MKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 405

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +++ +  NG  P+ + +N +I  +   G+ ++AM     M + G +    TYNT
Sbjct: 406 IKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 465

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKP------------------------------- 211
           +IKGY  +G    ++++LDLM R+G  KP                               
Sbjct: 466 IIKGYCDSGNTTSALRILDLM-RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 524

Query: 212 ----NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
               N  TY  L+  +C ++ +  A +++  M  SG +P+V TYN +     +      A
Sbjct: 525 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 584

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
           EE+   M   G+ PN  T   +I G CK G    AL     M E G  PNL+ ++ LI+ 
Sbjct: 585 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 644

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             +    +  + + A ++   + PD ITY  ++ A+  +G ++        M KAG +P 
Sbjct: 645 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 704

Query: 388 AHAYSILAKGYVRE----------------------QEPEKAEELLMTMIESGFHP--NV 423
              Y +L KG   E                      Q  ++    +M+   +   P  +V
Sbjct: 705 LWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSV 764

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
            +   ++S   + G    A E+   M   G+ P+ + + +L+      R    A  + + 
Sbjct: 765 QVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKH 824

Query: 484 MKAFG 488
           M   G
Sbjct: 825 MSTQG 829



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/330 (23%), Positives = 149/330 (45%), Gaps = 7/330 (2%)

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            ++  LD++S+ G ++  L  Y+ L+             +  H+M + G++P+++ YN +
Sbjct: 163 RTMSFLDMLSQSG-LRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAV 221

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             A  ++G    AE ++ ++  + + P+  T   +I G+C++  +  AL+    M + G 
Sbjct: 222 INALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGC 281

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDK 371
            PN V ++ LI G     D   V+E   L++E  ++   P   T +  + A    G  + 
Sbjct: 282 EPNTVTYSTLINGLC---DSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F DM   G +P+ + Y+ L  G       + A  L   M   G  PN V +  +I+
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
               +  +  A  V + M  +G SPN+ T+  ++ GY     P +A  ++  M   G   
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKN 521
              T+  + +    +G T  A RIL  +++
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRD 488



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 69/278 (24%), Positives = 125/278 (44%)

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L+++  +++ +    + +  ++ SG++  +  Y+ +    ++ G      +    M   G
Sbjct: 151 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 210

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           VQPN      +I+  CK+G + +A    + + E  + P+   +  +I G     D D   
Sbjct: 211 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 270

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           +V   M +    P+ +TYST++N    +G +++  ++  +M   GI P AH  +      
Sbjct: 271 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 330

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
                 E A  L + M   G  PNV  +T +ISG C  G +  AI +F +M   GV PN 
Sbjct: 331 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNT 390

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            T+  L+    E R+   A  +L +M   G  P   T+
Sbjct: 391 VTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTY 428



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 143/348 (41%), Gaps = 58/348 (16%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++ L + G    A  +FN +IE G  P+L+TY++L+ AL  + +     ++ +
Sbjct: 600 VVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFA 659

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG----- 186
           ++E +G+ PD I +  +I A+  SG +E A +   +M ++G  PT  TY  LIKG     
Sbjct: 660 ELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEY 719

Query: 187 ------------------YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
                             +G     +++V ++     E +   +++  N LV        
Sbjct: 720 LLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGR 779

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
             EA  ++  M + G+ PD   YN++  +  +    D A  V   M   G + +      
Sbjct: 780 WFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKE 839

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +I   C+  + KEA               +   N+L++ +                    
Sbjct: 840 LICALCQLHRRKEA--------------RITFENMLMRTW-------------------- 865

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            NPD +  + +++     G+ D C E    M      P  H Y+ILA+
Sbjct: 866 -NPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 912


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 227/457 (49%), Gaps = 4/457 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L+      GK ++A  I   L   G  P ++TY  +++        N+  S++ ++  
Sbjct: 141 TTLIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS- 199

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + PD + +N ++ +  +SG +++AM+   +M +    P   TY  LI+          
Sbjct: 200 --VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++KLLD M R+    P++ TYNVLV   C E  + EA   ++ M +SG +P+V+T+N I 
Sbjct: 258 AMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            +    G    AE+++ +M   G  P+  T  I+I+  C++G +  A+     M ++G  
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN + +N L+ GF +    D   E L  M      PD++TY+T++ A    G ++   EI
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            + +   G  P    Y+ +  G  +  +  KA +LL  M      P+ + +++++ G   
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G +D AI+ F +    G+ PN  TF ++M G  ++RQ  RA + L  M   G  P +++
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETS 556

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
           + +L E     G+ KEA  +L+++ NK    +  AE+
Sbjct: 557 YTILIEGLAYEGMAKEALELLNELCNKGLMKKSSAEQ 593



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 161/319 (50%), Gaps = 1/319 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N + + G+  EA    N++   G +P+++T+  +L ++    R+     +++ +   G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P  + FN +IN     G +  A+D   KM + G  P + +YN L+ G+    K + ++
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           + L+ M   G   P++ TYN ++ A C +  + +A  +++++++ G  P ++TYNT+   
Sbjct: 400 EYLERMVSRG-CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            A+ G+  +A +++ EM    ++P+  T   ++ G  +EGK+ EA++F    +  G+ PN
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPN 518

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V FN ++ G  +    D   + L  M      P+  +Y+ ++   +  G   +  E+ +
Sbjct: 519 AVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLN 578

Query: 378 DMGKAGIKPDAHAYSILAK 396
           ++   G+   + A  +  K
Sbjct: 579 ELCNKGLMKKSSAEQVAGK 597



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 180/397 (45%), Gaps = 56/397 (14%)

Query: 167 KMKESGLTPTTSTYNTLIKGY------GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           K++ SGL      + TL  GY      G       S  L D+ S            N  +
Sbjct: 62  KVESSGLNGRAQKFETLSSGYSNSNGNGHYSSVNSSFALEDVES------------NNHL 109

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           R       + E +  +  M   G  PD++   T+   + + G+  +A +++  +E +G  
Sbjct: 110 RQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAV 169

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------VEI 331
           P+  T  ++ISGYCK G+I  AL     M    V P++V +N +++           +E+
Sbjct: 170 PDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAMEV 226

Query: 332 MDR-----------------------DGVDEVLALMKEFR---VNPDVITYSTIMNAWST 365
           +DR                        GV   + L+ E R     PDV+TY+ ++N    
Sbjct: 227 LDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK 286

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G +D+  +  +DM  +G +P+   ++I+ +          AE+LL  M+  GF P+VV 
Sbjct: 287 EGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVT 346

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           F  +I+  C  G + RAI++ +KM +HG  PN  ++  L+ G+ + ++  RA E L+ M 
Sbjct: 347 FNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMV 406

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           + G +P   T+  +  A    G  ++A  IL+++ +K
Sbjct: 407 SRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 55/206 (26%), Positives = 98/206 (47%), Gaps = 1/206 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L++   +  K   A      ++  G  P +VTY T+L AL    +      I++Q+
Sbjct: 381 SYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQL 440

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P  I +N VI+  +++G   +A+    +M+   L P T TY++L+ G    GK 
Sbjct: 441 SSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKV 500

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E++K      R G ++PN  T+N ++   C  +    A + +  M   G KP+  +Y  
Sbjct: 501 DEAIKFFHEFERMG-IRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTI 559

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGV 279
           +    A  G A +A E++ E+ + G+
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGL 585


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/391 (30%), Positives = 211/391 (53%), Gaps = 1/391 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+  F++++  G  P++ TY  L+ AL  +       SI+  +   G  P+ + +N ++ 
Sbjct: 134 ARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVA 193

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           AF  +G ++ A      M + GL P   T+N+++ G   AGK E++ K+ D M REG + 
Sbjct: 194 AFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREG-LA 252

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P+  +YN LV  +C      EA +V  +M   G+ PDVVT+ ++     + G  + A  +
Sbjct: 253 PDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTL 312

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + +M   G+Q N  T   +I G+CK+G + +AL   R M++  + P++V +N LI G+  
Sbjct: 313 VRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCM 372

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           +   D   E+L  M+   + PDV+TYSTI++A+          E+   M + G+ PDA  
Sbjct: 373 VGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAIT 432

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YS L +    E+    A  L   MI+ G  P+   +T++I G C +G+++RA+ + DKM 
Sbjct: 433 YSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMV 492

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           + GV P++ T+  L+ G S++ +   A+++L
Sbjct: 493 KAGVLPDVVTYSVLINGLSKSARAMEAQQLL 523



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 123/507 (24%), Positives = 224/507 (44%), Gaps = 51/507 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +L  RG  +EA +I  ++   G  P++VTY TL+AA       +    ++  + + G
Sbjct: 156 LIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGG 215

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ + FN+++N   ++G ME+A   F +M   GL P   +YNTL+ GY  AG   E++
Sbjct: 216 LKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEAL 275

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM------------- 244
            +   M+++G + P++ T+  L+   C   N+  A  ++ +M   G+             
Sbjct: 276 SVFAEMTQKG-IMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDG 334

Query: 245 ----------------------KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
                                 KP VV YN +   Y   G  D+A E++ EME  G++P+
Sbjct: 335 FCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPD 394

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   IIS YCK      A    + M E GV P+ + ++ LI+   E         +  
Sbjct: 395 VVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFK 454

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M +  + PD  TY+++++     G +++   + D M KAG+ PD   YS+L  G  +  
Sbjct: 455 NMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSA 514

Query: 403 EPEKAEELLMTMIESGFHPNVVIF---------------TTIISGWCSDGSMDRAIEVFD 447
              +A++LL  +      P    +                 ++ G+C  G M+ A +V+ 
Sbjct: 515 RAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQ 574

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            M +   + +   +  L+ G+  A    +A    + M   G  P  ++ + L       G
Sbjct: 575 SMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENG 634

Query: 508 LTKEAKRILSKIKNKERTNEMEAEEDI 534
           +  EA +++ ++ N     + EA + +
Sbjct: 635 MVVEADQVIQQLLNCCSLADAEASKAL 661



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 237/519 (45%), Gaps = 79/519 (15%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  P  + +NAV+ A S++ ++  A   F  M   G+ P   TYN LI+     G  +E+
Sbjct: 111 GYVPSVLAYNAVLLALSDA-SLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + +L  M R     PN+ TYN LV A+     +  A  ++  M   G+KP++VT+N++  
Sbjct: 170 LSILRDM-RGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVN 228

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR------------ 304
              + G+ + A +V  EM   G+ P+G +   ++ GYCK G   EAL             
Sbjct: 229 GMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMP 288

Query: 305 -----------------------FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
                                    R M+E G+  N V F  LI GF +    D  D +L
Sbjct: 289 DVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD--DALL 346

Query: 342 AL--MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           A+  M++ R+ P V+ Y+ ++N +   G MD+ +E+  +M   G+KPD   YS +   Y 
Sbjct: 347 AVRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYC 406

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +  +   A EL   M+E G  P+ + ++++I   C +  +  A  +F  M + G+ P+  
Sbjct: 407 KNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEF 466

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+ +L+ G+ +     RA  +   M   GV P   T+ +L       GL+K A+      
Sbjct: 467 TYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVL-----INGLSKSAR------ 515

Query: 520 KNKERTNEMEAEEDIPVESLERLYHKEATTAS--YPNLLQIPNVVSSDQKGSAAALKKG- 576
                   MEA+     + L +LYH+E   A+  Y  L+   +     +  S  AL KG 
Sbjct: 516 -------AMEAQ-----QLLFKLYHEEPIPANTKYDALM---HCCRKAELKSVLALLKGF 560

Query: 577 --RMLLRDAD----SSLECSWFATTSMY--LSHS-CKSG 606
             + L+ +AD    S L+ +W    S+Y  L H  C++G
Sbjct: 561 CMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAG 599



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 183/391 (46%), Gaps = 16/391 (4%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L+    + G   EA ++F  + + G  P +VT+T+L+  +          +++ Q+
Sbjct: 257 SYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQM 316

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E G+  + + F A+I+ F + G +++A+     M++  + P+   YN LI GY + G+ 
Sbjct: 317 RERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGYCMVGRM 376

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+ +LL  M  +G +KP++ TY+ ++ A+C   +   A+ +  +M   G+ PD +TY++
Sbjct: 377 DEARELLHEMEAKG-LKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSS 435

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     +      A  +   M   G+QP+  T   +I G+CKEG ++ AL     M + G
Sbjct: 436 LIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAG 495

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA------- 366
           V P++V +++LI G  +        ++L  +      P    Y  +M+    A       
Sbjct: 496 VLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLA 555

Query: 367 --------GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
                   G M++  +++  M       D   YS+L  G+ R     KA      M++ G
Sbjct: 556 LLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRG 615

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           F PN     ++I G   +G +  A +V  ++
Sbjct: 616 FAPNSTSTISLIRGLFENGMVVEADQVIQQL 646



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 106/469 (22%), Positives = 204/469 (43%), Gaps = 86/469 (18%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   ++N + + GK ++A+ +F+ ++  G  P  V+Y TL+         +   S+ +++
Sbjct: 222 TFNSMVNGMCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM 281

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            + G+ PD + F ++I+   ++GN+E A+    +M+E GL     T+  LI G+   G  
Sbjct: 282 TQKGIMPDVVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFL 341

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++++  +  M R+  +KP++  YN L+  +C    + EA  ++H+M A G+KPDVVTY+T
Sbjct: 342 DDALLAVRGM-RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYST 400

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGV---------------------------------- 279
           I +AY +N +   A E+  +M   GV                                  
Sbjct: 401 IISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLG 460

Query: 280 -QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------- 328
            QP+  T   +I G+CKEG ++ AL     M + GV P++V +++LI G           
Sbjct: 461 LQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQ 520

Query: 329 ---------------------VEIMDRDGVDEVLALMKEFRV------------------ 349
                                +    +  +  VLAL+K F +                  
Sbjct: 521 QLLFKLYHEEPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRN 580

Query: 350 -NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
            N D   YS +++    AG + K       M + G  P++ +   L +G        +A+
Sbjct: 581 WNLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEAD 640

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           +++  ++      +      +I    ++G++D  ++V   M + G+ P+
Sbjct: 641 QVIQQLLNCCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPS 689



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 56/283 (19%), Positives = 114/283 (40%), Gaps = 58/283 (20%)

Query: 58  THCSFCMNKESCR-----TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTT 112
           TH +F +N++           + + L+  L E  +  +A  +F N+I+ G +P   TYT+
Sbjct: 411 THSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTS 470

Query: 113 LLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG 172
           L+     +       S+  ++ + G+ PD + ++ +IN  S+S    EA    +K+    
Sbjct: 471 LIDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEE 530

Query: 173 LTPTTSTYNTL---------------IKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTY 216
             P  + Y+ L               +KG+ + G   E+ K+   ++ R  N+  ++  Y
Sbjct: 531 PIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSV--Y 588

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE--- 273
           +VL+   C   N+ +A +   +M   G  P+  +  ++     +NG   +A++VI +   
Sbjct: 589 SVLIHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLN 648

Query: 274 --------------------------------MEHNGVQPNGR 284
                                           M  +G+ P+ R
Sbjct: 649 CCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDGLLPSPR 691


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 204/397 (51%), Gaps = 4/397 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L +  K  +A  +F  +++    P +VTY  L+  L  Q+R    + +  +    G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMK-ESGLTPTTSTYNTLIKGYGIAGKPEES 196
             P  + +N +I+   + G +E A+  +  M    G  PT  TY+TLI G     + ++ 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            KLL+ M+  G   PN  TYN LV A   +    EA++++ +MAA+G  P+++T+  I  
Sbjct: 121 CKLLEEMAGRG-CAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIK 179

Query: 257 AYAQNGEADQAEEVIVEME--HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              + GE + A  V+ EM    +G+ P+  T   ++ G CKE +I +A    +   E G 
Sbjct: 180 GLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGC 239

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            PN+V ++ LI G  ++   D   ++LA M E     + +TYST+++     G M+    
Sbjct: 240 RPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVV 299

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +   M  AG  PDA  Y+ L  G+ + Q   +A  LL  M+E+GFHP+VV +TT+  G C
Sbjct: 300 VLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLC 359

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             G  D A+E+ D M   G +PN  T+ +++ G  +A
Sbjct: 360 RSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKA 396



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 240/486 (49%), Gaps = 44/486 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNL-IEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           TV +   +++ L + G+ + A  +++++ I  G +P++VTY+TL+  L      +    +
Sbjct: 64  TVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKL 123

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++   G  P+++ +N ++NA    G  +EA     +M  +G  P   T+  +IKG   
Sbjct: 124 LEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCK 183

Query: 190 AGKPEESVKLLDLMSR-EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            G+ E + +++D M   E  + P++ T+N ++   C E+ I +A NV  +    G +P+V
Sbjct: 184 EGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNV 243

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTY+T+    ++  + D+A +++ +M   G + N  T   ++ G  K G++++A+   R 
Sbjct: 244 VTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQ 303

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWST 365
           M++ G  P+ V +N LI GF +   R  + E + L++E      +P V+TY+T+ +    
Sbjct: 304 MRDAGCLPDAVTYNTLIDGFFK---RQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 366 AGFMDKCKEIFDDMGKAGIKPDA----------------------------------H-- 389
           +G  D+  EI D M   G  P+A                                  H  
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVI 420

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           AYS L  G  +  + ++A E L  MI +G  P+VV F+ +I+G C  G +D  +E+F  M
Sbjct: 421 AYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGM 480

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
            E G  P++ T+ TL+     A +   A ++ Q M++ G+ P +ST   +          
Sbjct: 481 AERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMIHGLLEVNRD 540

Query: 510 KEAKRI 515
           ++AKRI
Sbjct: 541 EDAKRI 546



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 180/375 (48%), Gaps = 8/375 (2%)

Query: 148 VINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
           +I+   +S  +++A+  F +M +  + P   TY  LI G G   + +E+  L +  +R  
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFE-EARAK 59

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYNTIATAYAQNGEADQ 266
              P + TYN ++   C    I  A  +   MA   G +P VVTY+T+     ++ E D+
Sbjct: 60  GCHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDK 119

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
             +++ EM   G  PN  T   +++    +G+ KEA      M   G  P L+ F L+IK
Sbjct: 120 GCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIK 179

Query: 327 GFVEIMDRDG----VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           G  +  + +     VDE+   M E  ++PDVIT++++++       +     +F    + 
Sbjct: 180 GLCKEGEIEAAFRVVDEMF--MIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALER 237

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G +P+   YS L  G  +  + ++A +LL  M+E G   N V ++T++ G    G M+ A
Sbjct: 238 GCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDA 297

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           + V  +M + G  P+  T+ TL+ G+ + ++   A  +L+ M   G HP   T+  L   
Sbjct: 298 VVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHG 357

Query: 503 RRATGLTKEAKRILS 517
              +G   EA  IL 
Sbjct: 358 LCRSGRFDEAVEILD 372



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 155/318 (48%), Gaps = 9/318 (2%)

Query: 66  KESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           +  CR  V + + L++ L +  K  EA  +   ++E G + + VTY+T++  L    R  
Sbjct: 236 ERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRME 295

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
               ++ Q+ + G  PD++ +N +I+ F +   + EA+    +M E+G  P+  TY TL 
Sbjct: 296 DAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLC 355

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G   +G+ +E+V++LD M+  G   PN  TY+ +V   C    +TEA     KMA   +
Sbjct: 356 HGLCRSGRFDEAVEILDYMAARG-CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 414

Query: 245 -KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             P V+ Y+ +     + G+ D+A E +  M   G  P+  T  I+I+G C  G+I   L
Sbjct: 415 VAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGL 474

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIM 360
              R M E G  P++V +  L+     +     VDE   L ++ R   ++PD  T  T++
Sbjct: 475 ELFRGMAERGCVPDMVTYATLVD---RLCRASRVDEAFDLFQQMRSDGLSPDRSTRRTMI 531

Query: 361 NAWSTAGFMDKCKEIFDD 378
           +        +  K I D+
Sbjct: 532 HGLLEVNRDEDAKRIQDE 549


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 114/385 (29%), Positives = 212/385 (55%), Gaps = 5/385 (1%)

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
           I+K F+    ++ ++ E G  P+ + +  +I+   + G +E+A D F++M + GL     
Sbjct: 179 IEKSFD----LLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEW 234

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           TY  LI G    G  ++  ++ + M   G V PNL TYN ++   C +    +A+ V  +
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHG-VFPNLHTYNCVMNQLCKDGRTKDAFKVFDE 293

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M   G+  ++VTYNT+     +  +A++A EV+ +M+ +G+ PN  T   +I G+C   K
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRK 353

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           + +AL   R +K  G+ P+LV +N+L+ GF +  D  G  +V+  M+E  + P  +TY+ 
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTI 413

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++ ++ +  M+K  ++   M + G+ PD H YS+L  G+  +    +A  L  +M+E  
Sbjct: 414 LIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKK 473

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
           F PN VI+ T++ G+C +GS  RA+ +F +M E  + PN+ ++  ++    + R+   AE
Sbjct: 474 FEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAE 533

Query: 479 EILQIMKAFGVHPQKSTFLLLAEAR 503
            +++ M   G+ P  S   L++ A+
Sbjct: 534 GLVEKMIDSGIGPSDSILNLISRAK 558



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 210/445 (47%), Gaps = 8/445 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N+ ++      +   FN +++ G  P    +  LL  +     FN      ++  +  
Sbjct: 100 IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-SKIK 158

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   F  VI    E+G +E++ D   +++E G +P    Y TLI G    G+ E++ 
Sbjct: 159 VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAK 218

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M + G V  N  TY VL+          + + +  KM   G+ P++ TYN +   
Sbjct: 219 DLFFEMGKFGLV-ANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQ 277

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             ++G    A +V  EM   GV  N  T   +I G C+E K  EA      MK  G++PN
Sbjct: 278 LCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPN 337

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
           L+ +N LI GF  +     + + L+L ++ +   ++P ++TY+ +++ +   G      +
Sbjct: 338 LITYNTLIDGFCGVRK---LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +  +M + GIKP    Y+IL   + R    EKA +L  +M E G  P+V  ++ +I G+C
Sbjct: 395 VVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFC 454

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G M+ A  +F  M E    PN   + T++ GY +    +RA  + + M+   + P  +
Sbjct: 455 IKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVA 514

Query: 495 TFLLLAEARRATGLTKEAKRILSKI 519
           ++  + E       +KEA+ ++ K+
Sbjct: 515 SYRYMIEVLCKERKSKEAEGLVEKM 539



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 89/202 (44%), Gaps = 1/202 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   ++G    A  +   + E G KPS VTYT L+              + S +EE G
Sbjct: 379 LVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELG 438

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   ++ +I+ F   G M EA   F  M E    P    YNT++ GY   G    ++
Sbjct: 439 LTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRAL 498

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L   M  E  + PN+ +Y  ++   C E+   EA  ++ KM  SG+ P     N I+ A
Sbjct: 499 RLFREM-EEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLISRA 557

Query: 258 YAQNGEADQAEEVIVEMEHNGV 279
              +      EE    M  +G+
Sbjct: 558 KNDSHSRSMDEEEPASMVFDGL 579



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/149 (22%), Positives = 73/149 (48%), Gaps = 1/149 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+++       ++A  + +++ E G  P + TY+ L+    I+ R N    +   +
Sbjct: 410 TYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSM 469

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E   +P+ + +N ++  + + G+   A+  F +M+E  L P  ++Y  +I+      K 
Sbjct: 470 VEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKS 529

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRA 222
           +E+  L++ M   G + P+    N++ RA
Sbjct: 530 KEAEGLVEKMIDSG-IGPSDSILNLISRA 557


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 127/457 (27%), Positives = 226/457 (49%), Gaps = 4/457 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L+      GK ++A  I   L   G  P ++TY  +++        N+  S++ ++  
Sbjct: 141 TTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMS- 199

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + PD + +N ++ +  +SG +++AM+   +M +    P   TY  LI+         +
Sbjct: 200 --VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQ 257

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++KLLD M R+    P++ TYNVLV   C E  + EA   ++ M +SG +P+V+T+N I 
Sbjct: 258 AMKLLDEM-RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIIL 316

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            +    G    AE+++ +M   G  P+  T  I+I+  C++G +  A+     M ++G  
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQ 376

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN + +N L+ GF +    D   E L  M      PD++TY+T++ A    G ++   EI
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            + +   G  P    Y+ +  G  +  +  KA +LL  M      P+ + +++++ G   
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G +D AI+ F +    GV PN  TF ++M G  + RQ  RA + L  M   G  P +++
Sbjct: 497 EGKVDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETS 556

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
           + +L E     G+ KEA  +L+++ NK       AE+
Sbjct: 557 YTILIEGLAYEGMAKEALELLNELCNKGLMKRSSAEQ 593



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 203/378 (53%), Gaps = 9/378 (2%)

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +G  PD I    +I  F   G   +A      ++ SG  P   TYN +I GY  AG+   
Sbjct: 131 HGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINN 190

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++ +LD MS    V P++ TYN ++R+ C+   + +A  V+ +M      PDV+TY  + 
Sbjct: 191 ALSVLDRMS----VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILI 246

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            A  ++    QA +++ EM   G  P+  T  ++++G CKEG++ EA++F   M   G  
Sbjct: 247 EATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQ 306

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN++  N++++           +++LA M     +P V+T++ ++N     G + +  +I
Sbjct: 307 PNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDI 366

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            + M K G +P++ +Y+ L  G+ +E++ ++A E L  M+  G +P++V + T+++  C 
Sbjct: 367 LEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCK 426

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           DG ++ A+E+ +++   G SP L T+ T++ G ++A +  +A ++L  M+A  + P   T
Sbjct: 427 DGKVEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTIT 486

Query: 496 FLLLAEARRATGLTKEAK 513
           +  L       GL++E K
Sbjct: 487 YSSL-----VGGLSREGK 499



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 160/319 (50%), Gaps = 1/319 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N + + G+  EA    N++   G +P+++T+  +L ++    R+     +++ +   G
Sbjct: 280 LVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKG 339

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P  + FN +IN     G +  A+D   KM + G  P + +YN L+ G+    K + ++
Sbjct: 340 FSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAI 399

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           + L+ M   G   P++ TYN ++ A C +  + +A  +++++++ G  P ++TYNT+   
Sbjct: 400 EYLERMVSRG-CYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLITYNTVIDG 458

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            A+ G+  +A +++ EM    ++P+  T   ++ G  +EGK+ EA++F    +  GV PN
Sbjct: 459 LAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGVRPN 518

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V FN ++ G  +    D   + L  M      P   +Y+ ++   +  G   +  E+ +
Sbjct: 519 AVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAYEGMAKEALELLN 578

Query: 378 DMGKAGIKPDAHAYSILAK 396
           ++   G+   + A  +  K
Sbjct: 579 ELCNKGLMKRSSAEQVAGK 597



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 163/338 (48%), Gaps = 38/338 (11%)

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +R       + E +  +  M   G  PD++   T+   + + G+  +A +++  +E +G 
Sbjct: 109 LRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEVLEGSGA 168

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------VE 330
            P+  T  ++ISGYCK G+I  AL     M    V P++V +N +++           +E
Sbjct: 169 VPDVITYNVMISGYCKAGEINNALSVLDRMS---VSPDVVTYNTILRSLCDSGKLKQAME 225

Query: 331 IMDR-----------------------DGVDEVLALMKEFR---VNPDVITYSTIMNAWS 364
           ++DR                        GV + + L+ E R     PDV+TY+ ++N   
Sbjct: 226 VLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMRDRGCTPDVVTYNVLVNGIC 285

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G +D+  +  +DM  +G +P+   ++I+ +          AE+LL  M+  GF P+VV
Sbjct: 286 KEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVV 345

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            F  +I+  C  G + RAI++ +KM +HG  PN  ++  L+ G+ + ++  RA E L+ M
Sbjct: 346 TFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERM 405

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            + G +P   T+  +  A    G  ++A  IL+++ +K
Sbjct: 406 VSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK 443



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 59/217 (27%), Positives = 101/217 (46%), Gaps = 2/217 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C+    S   L++   +  K   A      ++  G  P +VTY T+L AL    +
Sbjct: 370 MPKHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGK 429

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 I++Q+   G  P  I +N VI+  +++G   +A+    +M+   L P T TY++
Sbjct: 430 VEDAVEILNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ G    GK +E++K      R G V+PN  T+N ++   C  +    A + +  M   
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMG-VRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINR 548

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           G KP   +Y  +    A  G A +A E++ E+ + G+
Sbjct: 549 GCKPTETSYTILIEGLAYEGMAKEALELLNELCNKGL 585


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 236/487 (48%), Gaps = 20/487 (4%)

Query: 54  SQPQTHCSFCMNKES-----------CRTVR--------SMTKLMNSLIERGKPQEAQAI 94
           S PQ HC F  N  +            R VR           K + S+ ++ +   A ++
Sbjct: 59  SLPQKHCGFGSNTSNDISIDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSL 118

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
            N +   G   ++ +   L+  L      +   S+M ++ + G+ PD+I FN +IN    
Sbjct: 119 CNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCN 178

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
            G ++EA+  F +M  SG  P   +YNT+I G    G    +V++   M +    KPN+ 
Sbjct: 179 EGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRG-KPNVV 237

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TYN ++ + C ++ + EA   + +M   G+ PDVVTYNTI   +   G+ ++A  +  EM
Sbjct: 238 TYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEM 297

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
               V P+  T  I++ G CKEG + EA   + TM E G  PN   +N L+ G+      
Sbjct: 298 VGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQM 357

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           D   +VL +M      P++ +Y+ ++N +  +  M++ K +  +M +  + PD   YS L
Sbjct: 358 DEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTL 417

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            +G  +   P +A  L   M  SG  P+++ ++ ++ G+C  G +D A+++  +M E  +
Sbjct: 418 MQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRI 477

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            PN+  +  L+ G   A +   A+E+   + A G+ P   T+ ++ +     GL+ EA  
Sbjct: 478 KPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYE 537

Query: 515 ILSKIKN 521
              K+++
Sbjct: 538 FFRKMED 544



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/433 (27%), Positives = 223/433 (51%), Gaps = 11/433 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI--MS 131
           +   L+N L   GK +EA  +FN ++  GH+P++++Y T++  L   K  N+I ++    
Sbjct: 168 TFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLC--KNGNTIMAVRVFR 225

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++E+N   P+ + +N +I++  +   + EA++   +M + G+ P   TYNT++ G+   G
Sbjct: 226 KMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGFCSLG 285

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ +L   M    NV P+  T+N+LV   C E  ++EA  V   M   G +P+  TY
Sbjct: 286 QLNEATRLFKEMVGR-NVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNAYTY 344

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y  + + D+A +V+  M   G  PN  +  I+I+GYCK  ++ EA R    M E
Sbjct: 345 NALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSEMSE 404

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGF 368
             + P+ V ++ L++G  ++       E L L KE     + PD++ YS +++ +   G 
Sbjct: 405 KNLTPDTVTYSTLMQGLCQV---GRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGH 461

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D+  ++  +M +  IKP+   Y+IL +G     + E A+EL   +   G  P++  +  
Sbjct: 462 LDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNV 521

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G   +G  D A E F KM + G  P+  ++  ++ G+ + +    A +++  M    
Sbjct: 522 MIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKR 581

Query: 489 VHPQKSTFLLLAE 501
                STF +L +
Sbjct: 582 FSADSSTFQMLLD 594



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 205/397 (51%), Gaps = 7/397 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   ++N L + G    A  +F  + +   KP++VTY T++ +L   +  N     +S
Sbjct: 201 VISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLS 260

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G+ PD + +N +++ F   G + EA   F +M    + P T T+N L+ G    G
Sbjct: 261 EMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEG 320

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E+  + + M+ +G  +PN  TYN L+  +C    + EA  V+  M   G  P++ +Y
Sbjct: 321 MVSEARCVSETMTEKG-AEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSY 379

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y ++   ++A+ ++ EM    + P+  T   ++ G C+ G+ +EAL   + M  
Sbjct: 380 NILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCS 439

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGF 368
            G+ P+L+ +++L+ GF +      +DE L L+KE    R+ P++I Y+ ++     AG 
Sbjct: 440 SGLLPDLMAYSILLDGFCK---HGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGK 496

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           ++  KE+F  +   GI+PD   Y+++ KG ++E   ++A E    M + GF P+   +  
Sbjct: 497 LEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNV 556

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           II G+  +     AI++ D+M     S +  TF+ L+
Sbjct: 557 IIQGFLQNQDSSTAIQLIDEMVGKRFSADSSTFQMLL 593



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 88/318 (27%), Positives = 152/318 (47%)

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
           N +P++  +   + +   +K  + A ++ ++M   G+  +V + N +     +    D A
Sbjct: 91  NPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFA 150

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
             V+ +M   G+QP+  T   +I+G C EGKIKEA+     M   G  PN++ +N +I G
Sbjct: 151 VSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVING 210

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             +  +      V   M++ R  P+V+TY+TI+++      +++  E   +M   GI PD
Sbjct: 211 LCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPD 270

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ +  G+    +  +A  L   M+     P+ V F  ++ G C +G +  A  V +
Sbjct: 271 VVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSE 330

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            M E G  PN  T+  LM GY    Q   A ++L IM   G  P  S++ +L      + 
Sbjct: 331 TMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSK 390

Query: 508 LTKEAKRILSKIKNKERT 525
              EAKR+LS++  K  T
Sbjct: 391 RMNEAKRLLSEMSEKNLT 408


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 227/454 (50%), Gaps = 14/454 (3%)

Query: 67  ESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           + CR  V + T LMN L   G+  EA A+ + ++E G +P+ +TY T++  +       S
Sbjct: 172 QMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVS 231

Query: 126 IHSIMSQVEE-NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
             +++ ++EE + + P+ + ++A+I+   + G   +A + + +M+E G+ P   TYN +I
Sbjct: 232 ALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMI 291

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G+  +G+  E+ +LL  M  E  + PN+ TY+ L+ A+  E+   EA  +  +M   G+
Sbjct: 292 DGFCSSGRWSEAQRLLQEM-LERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGI 350

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P+ +TYN++   + +    D AE +   M   G  P+  T   +I GYC   +I +   
Sbjct: 351 IPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTE 410

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               M E G+  +   +N LI GF  + D +   ++   M    V PD++T +T+++   
Sbjct: 411 LLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLC 470

Query: 365 TAGFMDKCKEIFDDMGKA-----------GIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
             G +    E+F  M K+           G++PD   Y+IL  G + E +  +AEEL   
Sbjct: 471 DNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKE 530

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M   G  PN + ++++I+G C    +D A ++FD M     SP++ TF TL+ GY +A +
Sbjct: 531 MPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGR 590

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
                E+   M   G+     T++ L    R  G
Sbjct: 591 VDDGLELFCEMGRRGIVADAITYITLIHGFRKVG 624



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 214/422 (50%), Gaps = 15/422 (3%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +++ L + G+  +A  ++  + E G  P L TY  ++       R++    ++ ++ E
Sbjct: 253 SAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLE 312

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             ++P+ + ++A+INA+ +     EA + + +M   G+ P T TYN++I G+    + + 
Sbjct: 313 RKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDA 372

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  +  +M+ +G   P++ T+N L+  +C  K I +   ++H+M  +G+  D  TYNT+ 
Sbjct: 373 AEHMFYVMATKG-CSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLI 431

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY--- 312
             +   G+ + A ++  +M  +GV P+  TC  ++ G C  GK+K+AL   + M++    
Sbjct: 432 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 491

Query: 313 --------GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
                   GV P++  +N+LI G +        +E+   M    + P+ ITYS+++N   
Sbjct: 492 LDASRPFNGVEPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLC 551

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
               +D+  ++FD MG     PD   ++ L  GY +    +   EL   M   G   + +
Sbjct: 552 KQSRLDEATQMFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAI 611

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN---LKTFETLMWGYSEARQPWRAEEIL 481
            + T+I G+   G+++ A+++F +M   GV P+   +++  T++W   E ++     E L
Sbjct: 612 TYITLIHGFRKVGNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDL 671

Query: 482 QI 483
           Q+
Sbjct: 672 QM 673



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 223/465 (47%), Gaps = 10/465 (2%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL +   E    ++A  +F++++     PS++ +  L+  +   +R + + S+  ++E  
Sbjct: 47  KLRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERK 106

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            +  D   FN +I  F     +  A+ TF K+ + G  P   T++TL+ G  +  +  E+
Sbjct: 107 QIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEA 166

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + L   M R     PN+ T+  L+   C E  + EA  ++ +M   G++P+ +TY TI  
Sbjct: 167 LDLFHQMCR-----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 221

Query: 257 AYAQNGEADQAEEVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              + G+   A  ++ +ME  + ++PN      II G  K+G+  +A      M+E G+ 
Sbjct: 222 GMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIF 281

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+L  +N +I GF           +L  M E ++NP+V+TYS ++NA+       + +E+
Sbjct: 282 PDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEEL 341

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           +D+M   GI P+   Y+ +  G+ ++   + AE +   M   G  P+V  F T+I G+C 
Sbjct: 342 YDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCG 401

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              +D   E+  +M E G+  +  T+ TL+ G+        A ++ Q M + GV P   T
Sbjct: 402 AKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 461

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLE 540
              L +     G  K+A  +   ++     ++M+ +   P   +E
Sbjct: 462 CNTLLDGLCDNGKLKDALEMFKAMQK----SKMDLDASRPFNGVE 502



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 213/453 (47%), Gaps = 20/453 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L+       K   A + F  + + G +P +VT++TLL  L ++ R +    +  
Sbjct: 112 VYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEALDLFH 171

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+      P+ + F  ++N     G + EA+    +M E GL P   TY T++ G    G
Sbjct: 172 QMCR----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIG 227

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++ LL  M    ++KPN+  Y+ ++     +   ++A N+  +M   G+ PD+ TY
Sbjct: 228 DTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTY 287

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   +  +G   +A+ ++ EM    + PN  T   +I+ Y KE K  EA      M  
Sbjct: 288 NCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLP 347

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN + +N +I GF +    D  + +  +M     +PDV T++T+++ +  A  +D 
Sbjct: 348 RGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDD 407

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+  +M + G+  D   Y+ L  G+    +   A +L   MI SG  P++V   T++ 
Sbjct: 408 GTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 467

Query: 432 GWCSDGSMDRAIEVFDKMCE-----------HGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           G C +G +  A+E+F  M +           +GV P+++T+  L+ G     +   AEE+
Sbjct: 468 GLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFLEAEEL 527

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            + M   G+ P   T+     +    GL K+++
Sbjct: 528 YKEMPHRGIVPNTITY-----SSMINGLCKQSR 555



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/204 (20%), Positives = 88/204 (43%), Gaps = 36/204 (17%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++   L++ LI  GK  EA+ ++  +   G  P+ +TY++++  L  Q R +    +  
Sbjct: 505 VQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFD 564

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +      PD + FN +++ + ++G +++ ++ F +M   G+     TY TLI G+   G
Sbjct: 565 SMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVG 624

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
                                               NI  A ++  +M +SG+ PD +T 
Sbjct: 625 ------------------------------------NINGALDIFQEMISSGVYPDTITI 648

Query: 252 NTIATAYAQNGEADQAEEVIVEME 275
            ++ T      E  +A  ++ +++
Sbjct: 649 RSMLTVLWSKEELKRAVAMLEDLQ 672


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 232/433 (53%), Gaps = 1/433 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A A+F +++     P+++ +  L   L   K+++ + ++  Q+E  G+  D    N
Sbjct: 70  KKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLN 129

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN F     +  A     K+ + G  P T T+NTL+ G  + G+  E+V+L+D M   
Sbjct: 130 IMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLS 189

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            +V P+L T N +V   C +  ++EA +++ +M A+G +P+  TY  I     ++G    
Sbjct: 190 QHV-PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNTAS 248

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A +++ +MEH  ++P+  T  III   CK+G++ +AL F   M+  G+  N+  +N LI 
Sbjct: 249 ALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSLIG 308

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
            F      D   ++L  M   ++ P+V+T+S ++++    G + + K+++++M   GI+P
Sbjct: 309 SFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEP 368

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           +   Y+ L  G   ++  ++A +++  M+  G  P++  +  +I+G+C    +D  + +F
Sbjct: 369 NTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLF 428

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            KM   G+  +  T+ TL+ G+ ++R+   A+++ Q M + GVHP   T+ +L +     
Sbjct: 429 RKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDN 488

Query: 507 GLTKEAKRILSKI 519
           G  +EA  IL ++
Sbjct: 489 GELEEALGILDQM 501



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/448 (23%), Positives = 209/448 (46%), Gaps = 3/448 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR-FNSIHSIMSQ 132
           ++  ++N    R K   A +    + + G++P+ VT+ TLL  L ++ R F ++  +   
Sbjct: 127 TLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCM 186

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           V    + PD I  N ++N       + EA+D   +M  +G  P   TY  ++     +G 
Sbjct: 187 VLSQHV-PDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGN 245

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
              ++ LL  M     +KP++ TY +++   C +  + +A +   +M   G+K +V TYN
Sbjct: 246 TASALDLLRKMEHR-KIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYN 304

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++  ++   G  D   +++ +M    + PN  T   +I    KEGK+ EA      M   
Sbjct: 305 SLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITR 364

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ PN + +N LI G       D  ++++ LM     +PD+ TY+ ++N +  A  +D  
Sbjct: 365 GIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDG 424

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             +F  M   G+  D   YS L +G+ + ++   A+++   M+  G HP ++ +  ++ G
Sbjct: 425 MRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDG 484

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C +G ++ A+ + D+M +  +  ++  +  ++ G   A +   A  +   + + GV   
Sbjct: 485 LCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRD 544

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIK 520
             ++ ++           EA  +  K+K
Sbjct: 545 IQSYNIMLSGLCKRSSLSEADALFRKMK 572



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/476 (22%), Positives = 224/476 (47%), Gaps = 38/476 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L   G+  EA  + + ++   H P L+T  T++  L ++ R +    +++++  NG
Sbjct: 166 LLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANG 225

Query: 138 MDPDSIFFNAVINAFSESGN-----------------------------------MEEAM 162
             P+   +  ++N   +SGN                                   +++A+
Sbjct: 226 CQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDAL 285

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVR 221
             F +M+  G+     TYN+LI  +   G+ ++  +LL D+++R+  + PN+ T++ L+ 
Sbjct: 286 SFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRK--ITPNVVTFSALID 343

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
           +   E  +TEA ++ ++M   G++P+ +TYN++      +   D+A +++  M   G  P
Sbjct: 344 SLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDP 403

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T  I+I+G+CK  ++ + +R  R M   G+  + V ++ LI+GF +        +V 
Sbjct: 404 DIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVF 463

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M    V+P ++TY+ +++     G +++   I D M K  ++ D   Y+I+  G    
Sbjct: 464 QEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNA 523

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            + + A  L  ++   G   ++  +  ++SG C   S+  A  +F KM E G  P+  T+
Sbjct: 524 NKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTY 583

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
            TL+  +        + ++++ MK  G     ST  ++ +   +  L K    +LS
Sbjct: 584 NTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDMLSSGELDKSFLNMLS 639



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 91/200 (45%), Gaps = 1/200 (0%)

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           L  G V+I   D V    ++++  R  P VI ++ +    +     D    +   M   G
Sbjct: 62  LRSGLVDIKKDDAVALFQSMLRS-RPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKG 120

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           I  D +  +I+   + R ++   A   +  + + G+ PN V F T+++G C +G +  A+
Sbjct: 121 IAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAV 180

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           E+ D M      P+L T  T++ G     +   A +++  M A G  P + T+  +    
Sbjct: 181 ELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRM 240

Query: 504 RATGLTKEAKRILSKIKNKE 523
             +G T  A  +L K+++++
Sbjct: 241 CKSGNTASALDLLRKMEHRK 260



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 53/234 (22%), Positives = 103/234 (44%), Gaps = 18/234 (7%)

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP---DVI 354
           K  +A+   ++M      P ++ FN L   F  +      D VLAL K+  +     D+ 
Sbjct: 70  KKDDAVALFQSMLRSRPLPTVIDFNRL---FGLLARTKQYDLVLALCKQMELKGIAYDLY 126

Query: 355 TYSTIMNAWS---TAGFMDKCKEIFDDMGKA---GIKPDAHAYSILAKGYVREQEPEKAE 408
           T + ++N +      GF       F  MGK    G +P+   ++ L  G   E    +A 
Sbjct: 127 TLNIMINCFCRRRKLGFA------FSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAV 180

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           EL+  M+ S   P+++   TI++G C    +  A+++  +M  +G  PN  T+  ++   
Sbjct: 181 ELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRM 240

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            ++     A ++L+ M+   + P   T+ ++ +     G   +A    S+++ K
Sbjct: 241 CKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETK 294


>gi|295830921|gb|ADG39129.1| AT5G21222-like protein [Neslia paniculata]
          Length = 166

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 100/165 (60%), Positives = 136/165 (82%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           LIE GHKPS++TYTTL+ ALT QK F+S+ S++S+VE+NG+ PD+I FNA+INA SESGN
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           +++AM  F +MKESG  PTTST+NTLIKGYG  GK EES +LL++M R+  ++PN RT N
Sbjct: 61  LDQAMKIFEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRTCN 120

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           +LV+AWCN++ + EAW +++KM + G+KPDVVT+NT+A AYA+ G
Sbjct: 121 ILVQAWCNQRKVEEAWQIVYKMQSYGVKPDVVTFNTLARAYARIG 165



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 49/165 (29%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR--EGNVKPNLRTYNVLVRAWCNEK 227
           E G  P+  TY TL+       + +    LL L+S+  +  +KP+   +N ++ A     
Sbjct: 3   EEGHKPSIITYTTLVTALT---RQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESG 59

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG-VQPNGRTC 286
           N+ +A  +  +M  SG KP   T+NT+   Y + G+ +++  ++  M  +  +QPN RTC
Sbjct: 60  NLDQAMKIFEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRTC 119

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            I++  +C + K++EA +    M+ YGV P++V FN L + +  I
Sbjct: 120 NILVQAWCNQRKVEEAWQIVYKMQSYGVKPDVVTFNTLARAYARI 164



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 90/159 (56%), Gaps = 1/159 (0%)

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           KP++ TY  LV A   +K+     +++ K+  +G+KPD + +N I  A +++G  DQA +
Sbjct: 7   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 66

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGF 328
           +  +M+ +G +P   T   +I GY K GK++E+ R    M ++  + PN    N+L++ +
Sbjct: 67  IFEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRTCNILVQAW 126

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
                 +   +++  M+ + V PDV+T++T+  A++  G
Sbjct: 127 CNQRKVEEAWQIVYKMQSYGVKPDVVTFNTLARAYARIG 165



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 81/159 (50%), Gaps = 1/159 (0%)

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G KP ++TY T+ TA  +         +I ++E NG++P+      II+   + G + +A
Sbjct: 5   GHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 64

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM-KEFRVNPDVITYSTIMN 361
           ++    MKE G  P    FN LIKG+ ++   +    +L +M ++  + P+  T + ++ 
Sbjct: 65  MKIFEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRTCNILVQ 124

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           AW     +++  +I   M   G+KPD   ++ LA+ Y R
Sbjct: 125 AWCNQRKVEEAWQIVYKMQSYGVKPDVVTFNTLARAYAR 163



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 84/160 (52%), Gaps = 1/160 (0%)

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G  P+++ +  L+           +  +++ +++  + PD I ++ I+NA S +G +D
Sbjct: 3   EEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLD 62

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI-ESGFHPNVVIFTTI 429
           +  +IF+ M ++G KP    ++ L KGY +  + E++  LL  M+ +    PN      +
Sbjct: 63  QAMKIFEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRTCNIL 122

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +  WC+   ++ A ++  KM  +GV P++ TF TL   Y+
Sbjct: 123 VQAWCNQRKVEEAWQIVYKMQSYGVKPDVVTFNTLARAYA 162



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 73/158 (46%), Gaps = 1/158 (0%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P +ITY+T++ A +          +   + K G+KPD   ++ +          ++A ++
Sbjct: 8   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 67

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYS 469
              M ESG  P    F T+I G+   G ++ +  + + M  +  + PN +T   L+  + 
Sbjct: 68  FEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLLEMMLRDEMLQPNDRTCNILVQAWC 127

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
             R+   A +I+  M+++GV P   TF  LA A    G
Sbjct: 128 NQRKVEEAWQIVYKMQSYGVKPDVVTFNTLARAYARIG 165



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 51/103 (49%)

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           +IE G  P+++ +TT+++           + +  K+ ++G+ P+   F  ++   SE+  
Sbjct: 1   LIEEGHKPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGN 60

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
             +A +I + MK  G  P  STF  L +     G  +E+ R+L
Sbjct: 61  LDQAMKIFEQMKESGCKPTTSTFNTLIKGYGKLGKLEESSRLL 103


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 223/442 (50%), Gaps = 6/442 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +  KL+  L+  G    A  I+  ++ GG + ++ T   ++ AL   ++F ++   +
Sbjct: 221 SINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFL 280

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S +E  G+  D + +N +INA+   G +EEA          G+ P   TYN ++ G    
Sbjct: 281 SDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI 340

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK + +  +L  M + G + PN  TYN L+   C   NI EA  +  +M+  G+ PD+V+
Sbjct: 341 GKYDRAKDVLIEMLQLG-LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVS 399

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           ++++    A+NG   QA     EME +G+ P+     I+I G+C+ G + +AL+    M 
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML 459

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G   ++V +N  + G  +       D +   M E  + PD  T++T++  +   G MD
Sbjct: 460 ARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMD 519

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +F+ M +  +KPD   Y+ L  G+ +  E  +A+EL   MI     P+ + + T++
Sbjct: 520 KALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVL 579

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+CS G +  A+ + D+M E G+ PNL T  TL+ GY  +    +A E L  M + G+ 
Sbjct: 580 NGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGII 639

Query: 491 PQKSTFLLLAEARRATGLTKEA 512
           P   ++  L +     G  KEA
Sbjct: 640 PDSFSYNTLID-----GYLKEA 656



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 216/438 (49%), Gaps = 1/438 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N+    G  +EA  + N+    G +P L+TY  +L  L    +++    ++ ++ + G
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P++  +N ++       N+ EA + F +M   G+ P   ++++LI      G   +++
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQAL 417

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M R G V  N+  Y +L+  +C    +++A  +  +M A G   DVVTYNT    
Sbjct: 418 MHFREMERSGIVPDNV-IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNG 476

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +      A+ +  EM   G+ P+  T   +I GYCK+G + +AL     M    + P+
Sbjct: 477 LCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPD 536

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +N LI GF +  +     E+   M    + PD I+Y T++N + ++G + +   + D
Sbjct: 537 KVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCD 596

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + GI+P+    + L KGY R  +  KA E L  MI +G  P+   + T+I G+  + 
Sbjct: 597 QMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEA 656

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
           ++++A  + ++M + G+  N+ T+  ++ G+    +   AE++L+ M   G++P  +T+ 
Sbjct: 657 NLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYS 716

Query: 498 LLAEARRATGLTKEAKRI 515
            L     +    KEA R 
Sbjct: 717 SLINGHVSQDNMKEAFRF 734



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 197/380 (51%), Gaps = 1/380 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  +  R    EAQ IF+ +   G  P LV++++L+  L              ++E +G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD++ +  +I+ F  +G + +A+    +M   G      TYNT + G        ++ 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L + M   G V P+  T+  L+R +C + N+ +A N+   M  + +KPD VTYNT+   
Sbjct: 488 MLFNEMVERGMV-PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + GE  +A+E+  +M    + P+  + G +++G+C  G + EAL     M E G+ PN
Sbjct: 547 FCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPN 606

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           LV  N LIKG+    D     E L+ M    + PD  +Y+T+++ +     ++K   + +
Sbjct: 607 LVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILIN 666

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K G++ +   Y+++  G+  E + ++AE++L  MIE G +P+   ++++I+G  S  
Sbjct: 667 EMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQD 726

Query: 438 SMDRAIEVFDKMCEHGVSPN 457
           +M  A    D+M + G+ P+
Sbjct: 727 NMKEAFRFHDEMLQRGLVPD 746



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 189/383 (49%), Gaps = 13/383 (3%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++     +G ++ A + + ++   G+     T N ++       K E  +  L  M  
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G V  ++ TYN L+ A+C E  + EA+ +++  ++ GM+P ++TYN I     + G+ D
Sbjct: 286 KG-VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYD 344

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A++V++EM   G+ PN  T   ++   C+   I EA      M   GV P+LV F+ LI
Sbjct: 345 RAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLI 404

Query: 326 KGFVEIMDRDGVDEVLALMKEFR------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
                ++ R+G   +   +  FR      + PD + Y+ +++ +   G +    ++ D+M
Sbjct: 405 G----VLARNG--HLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G   D   Y+    G  +++    A+ L   M+E G  P+   FTT+I G+C DG+M
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D+A+ +F+ M    + P+  T+ TL+ G+ +A +  RA+E+   M    + P   ++  +
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
                ++GL  EA  +  ++  K
Sbjct: 579 LNGFCSSGLLPEALNLCDQMLEK 601



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 182/384 (47%), Gaps = 7/384 (1%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           + ++ ++  + ++  + E  + F  ++  G++ + +  N L+ G    G  + + ++   
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           + R G ++ N+ T N++V A C ++        +  M   G+  D+VTYNT+  AY + G
Sbjct: 248 VVR-GGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
             ++A +++      G++P   T   I+ G CK GK   A      M + G+ PN   +N
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366

Query: 323 LLIKGFVEIMDRDGV---DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            L+   VEI  RD +    E+   M    V PD++++S+++   +  G + +    F +M
Sbjct: 367 TLL---VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            ++GI PD   Y+IL  G+ R      A ++   M+  G   +VV + T ++G C     
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF 483

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             A  +F++M E G+ P+  TF TL+ GY +     +A  + + M    + P K T+  L
Sbjct: 484 ADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543

Query: 500 AEARRATGLTKEAKRILSKIKNKE 523
            +     G    AK +   +  K+
Sbjct: 544 IDGFCKAGEMGRAKELWDDMIRKD 567



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   + G+   A+ +++++I     P  ++Y T+L             ++  Q+ E G
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ +  N +I  +  SG+M +A +   KM  +G+ P + +YNTLI GY      E++ 
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L++ M + G ++ N+ TYN+++  +C E  + EA  V+ KM   G+ PD  TY+++   
Sbjct: 663 ILINEMEKRG-LQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGR 284
           +       +A     EM   G+ P+ R
Sbjct: 722 HVSQDNMKEAFRFHDEMLQRGLVPDDR 748



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 22/102 (21%), Positives = 51/102 (50%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L++  ++    ++A  + N + + G + +++TY  +L     + +      ++ ++
Sbjct: 644 SYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKM 703

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTP 175
            E G++PD   ++++IN      NM+EA     +M + GL P
Sbjct: 704 IEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 158/585 (27%), Positives = 259/585 (44%), Gaps = 87/585 (14%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ SL++ GK ++A      L+  G    + T+   ++ L    R     ++   + ++G
Sbjct: 22  LLRSLLKSGKIEKAHRFVEQLLVKGL-CDISTFNIYISGLCRASRIGDAQTVFDGMRKHG 80

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ I +NA+++     G M +A   + +M ++G +P   TYNTL+ G+   GK +E++
Sbjct: 81  FWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGKLDEAL 140

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+ D   + G V P++ TYN L+  +C    + EA  ++ +M +  + PDVVTYN++   
Sbjct: 141 KIFDGAVKRGFV-PDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTYNSLVNG 199

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE-GKIKEALRFARTMKEYGVHP 316
             +NG  D+A  +IV+    G  PN  T   +ISG C+E  +++ A +    M   G  P
Sbjct: 200 LCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNGCKP 256

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVL-----------------------ALMKEFRVN--- 350
           ++V +N LI G        GV E L                        L+KE RVN   
Sbjct: 257 DIVSYNALIHGLAR---EQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAF 313

Query: 351 ------------PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
                       PD ITY+  ++    AG ++    +  DM + G  PD  +++ +  G 
Sbjct: 314 ELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 373

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +E+  ++AE LL  M   G  PN + F T+I G C  G   +A+  F +M + GV P +
Sbjct: 374 CKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTV 433

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAF---GVHPQKSTFLLLAEARRATGLTKEAKRI 515
            T+  L+ G  +ARQ  R +E + +  A    G  P   T+  L +     G   +A+R+
Sbjct: 434 VTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRL 493

Query: 516 LSKIKNKERTNEMEAEEDIP-----------------VESLERLYHKEATTASYPNLLQI 558
           L           MEA+  IP                 V+    L+         P+ +  
Sbjct: 494 L---------GAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITY 544

Query: 559 PNVVSSDQKGSAAALKKGRML---LRDADSSLECSWFATTSMYLS 600
             ++S        AL K  M+   L   D SLE     T+ MY S
Sbjct: 545 GTIIS--------ALCKQEMVDKALALFDGSLEAGVVPTSGMYFS 581



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 212/416 (50%), Gaps = 10/416 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ-KRFNSIHSIM 130
           V +   L+N L + G+  EA+ +   +++ G  P+++TY+TL++ L  + +R  S   ++
Sbjct: 190 VVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLESARQLL 246

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  NG  PD + +NA+I+  +    + EA+  F  +   G  P   TYN LI G    
Sbjct: 247 EKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKE 306

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +  E+ +L   + + G ++P+  TY V +   C    + +A  ++  M   G  PDVV+
Sbjct: 307 DRVNEAFELFSGLVKHG-LEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVS 365

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +N +     +    D+AE ++  ME  G  PN  +   +I G C+ GK K+A+   + M 
Sbjct: 366 HNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 425

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL----ALMKEFRVNPDVITYSTIMNAWSTA 366
           + GV P +V +N+L+ G  +      + E +    A++++ RV PDV+TYS +++    A
Sbjct: 426 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRV-PDVVTYSALIDGLGKA 484

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G +D  + +   M   G  P+ + Y+ L  G     + ++A EL + M+E G  P+ + +
Sbjct: 485 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCVPDTITY 544

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            TIIS  C    +D+A+ +FD   E GV P    + +L+ G     +   A ++LQ
Sbjct: 545 GTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 119/252 (47%), Gaps = 40/252 (15%)

Query: 281 PNGRTCGIIISGYCKEGKIKEALRF------------------------------ART-- 308
           P+  T GI++    K GKI++A RF                              A+T  
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNIYISGLCRASRIGDAQTVF 73

Query: 309 --MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             M+++G  PN + +N L+ G            +   M +   +PDV+TY+T+++ +   
Sbjct: 74  DGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKV 133

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G +D+  +IFD   K G  PD   Y+ L  G+ +  + ++A+ +L  M+     P+VV +
Sbjct: 134 GKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTY 193

Query: 427 TTIISGWCSDGSMDRA-IEVFDKMCEHGVSPNLKTFETLMWGYS-EARQPWRAEEILQIM 484
            ++++G C +G +D A + + DK    G SPN+ T+ TL+ G   E R+   A ++L+ M
Sbjct: 194 NSLVNGLCKNGRVDEARMLIVDK----GFSPNVITYSTLISGLCRELRRLESARQLLEKM 249

Query: 485 KAFGVHPQKSTF 496
              G  P   ++
Sbjct: 250 VLNGCKPDIVSY 261


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 121/418 (28%), Positives = 222/418 (53%), Gaps = 1/418 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++T L+  L  +G+  +A    + ++  G   + V+Y TL+  L    + ++   ++ 
Sbjct: 142 VITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLR 201

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +V+   + P+ + +N +I++  +   + EA D + +M   G++P   TYN LI G+ I G
Sbjct: 202 RVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVG 261

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +++  L + M  E N+ PN+ T+N+LV  +C E+ + EA NV+  M   G+KPDV TY
Sbjct: 262 KMKDATDLFNKMIFE-NINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTY 320

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++   Y    E ++A+ +   +   GV PN  +  I+I G+CK  K+ EA+   + M  
Sbjct: 321 NSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHC 380

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             + P++V +N LI G  ++       +++  M +  V  D ITY++I++A      +DK
Sbjct: 381 NNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDK 440

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +   M   GI+PD   Y+ L  G  +    E A  +   ++  G+  +V I+T +I 
Sbjct: 441 AIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQ 500

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           G+CS G  D ++++  KM E+G  PN  T+E ++    +  +  +AE++L+ M   G+
Sbjct: 501 GFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 218/426 (51%), Gaps = 2/426 (0%)

Query: 95  FNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           FN L+   + KPS+  +  +L +L     ++++ S+  Q+E NG+  D +  + +IN FS
Sbjct: 59  FNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTVVSLHRQMEFNGITSDLVILSILINCFS 118

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           + G    +     K+ + G  P   T  TLIKG  + G+  ++++  D +   G    N 
Sbjct: 119 QLGQNPLSFSVLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALG-FHLNK 177

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            +Y  L+   C     + A  ++ ++    ++P+VV YNTI  +  +    ++A ++  E
Sbjct: 178 VSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSE 237

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M   G+ P+  T   +ISG+C  GK+K+A      M    ++PN+  FN+L+ GF +   
Sbjct: 238 MVSKGISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERR 297

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
                 VLA+M +  + PDV TY+++M+ +     ++K K IF+ + + G+ P+ H+YSI
Sbjct: 298 LKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSI 357

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           +  G+ + ++ ++A  L   M  +   P+VV + ++I G C  G +  A+++ D+M + G
Sbjct: 358 MIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRG 417

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           V  +  T+ +++    +  Q  +A  +L  MK  G+ P   T+  L +     G  ++A+
Sbjct: 418 VPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDAR 477

Query: 514 RILSKI 519
            +   +
Sbjct: 478 IVFEDL 483


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 124/421 (29%), Positives = 202/421 (47%), Gaps = 34/421 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   ++N L ++G+   A+ +FN ++  G  P   TY TLL        F     I 
Sbjct: 254 TLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIF 313

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S +   G+ PD I F+++I   S +G++++A+  F  MK SGL P    Y  LI GY   
Sbjct: 314 SDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRN 373

Query: 191 GKPEESVKLLDLMSREG----------------------------------NVKPNLRTY 216
           G   E++++ D M  +G                                   V P+  T+
Sbjct: 374 GMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTF 433

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
             L+   C E N+ +A ++   M    +KPD+VTYN +   + +  E ++A E+  EM  
Sbjct: 434 TTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMIS 493

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
             + PN  +  I+++GYC  G + EA R    M   G+ P LV  N +IKG+    D   
Sbjct: 494 RKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSK 553

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            DE L  M    V PD ITY+T++N +    +MDK   + + M   G++PD   Y+++  
Sbjct: 554 ADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILN 613

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G+ R+   ++AE +L  MIE G  P+   +TT+I+G+ S  ++  A    D+M + G  P
Sbjct: 614 GFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVP 673

Query: 457 N 457
           +
Sbjct: 674 D 674



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/437 (28%), Positives = 218/437 (49%), Gaps = 1/437 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N+    G   EA  + N++   G KP+L TY  ++  L  + R+     + +++   G
Sbjct: 226 LINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIG 285

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD+  +N ++     + N  EA D F  M   G++P   ++++LI      G  ++++
Sbjct: 286 LSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQAL 345

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M   G V  N+  Y +L+  +C    ++EA  +  KM   G   DVV YNTI   
Sbjct: 346 MYFRDMKTSGLVPDNV-IYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNG 404

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +      A  +  EM   GV P+  T   +I G+CKEG + +AL     M +  + P+
Sbjct: 405 LCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPD 464

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N+LI GF +  + +  +E+   M   ++ P+ I+Y+ ++N +   GF+ +   ++D
Sbjct: 465 IVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWD 524

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M + GIKP     + + KGY R  +  KA+E L  MI  G  P+ + + T+I+G+    
Sbjct: 525 EMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGE 584

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            MD+A  + +KM   G+ P++ T+  ++ G+    +   AE IL+ M   G+ P +ST+ 
Sbjct: 585 YMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYT 644

Query: 498 LLAEARRATGLTKEAKR 514
            L     +    KEA R
Sbjct: 645 TLINGYVSQDNLKEAFR 661



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 228/484 (47%), Gaps = 36/484 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   L+  L++ G    A  ++N +   G + ++ T   ++ AL    + + +   +
Sbjct: 149 SINACNSLLGGLVKMGWVDLAWEVYNEIARSGIELNVYTLNIMVNALCKDHKIDDVKPFL 208

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +E+ G+  D + +N +INA+   G + EA +    M   GL PT  TYN +I G    
Sbjct: 209 IDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKK 268

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+   +  + + M   G + P+  TYN L+   C   N  EA ++   M   G+ PD+++
Sbjct: 269 GRYVRAKGVFNEMLSIG-LSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLIS 327

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           ++++    ++NG  DQA     +M+ +G+ P+     I+I+GYC+ G + EAL     M 
Sbjct: 328 FSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKML 387

Query: 311 EYGVHPNLVIFNLLIKG-------------FVEIMDRDGVDE------------------ 339
           E G   ++V +N ++ G             F E+++R  V +                  
Sbjct: 388 EQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMG 447

Query: 340 ----VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
               +  +M +  + PD++TY+ +++ +     M+K  E++++M    I P+  +Y+IL 
Sbjct: 448 KALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILV 507

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            GY       +A  L   MI  G  P +V   T+I G+C  G + +A E   KM   GV 
Sbjct: 508 NGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVG 567

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P+  T+ TL+ G+ +     +A  ++  M+  G+ P   T+ ++       G  +EA+ I
Sbjct: 568 PDSITYNTLINGFVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELI 627

Query: 516 LSKI 519
           L K+
Sbjct: 628 LRKM 631



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 209/454 (46%), Gaps = 36/454 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ S ++  K  E    F  L   G   S+    +LL  L      +    + +++  +G
Sbjct: 121 LIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSG 180

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++ +    N ++NA  +   +++       M++ G+     TYNTLI  Y   G   E+ 
Sbjct: 181 IELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAF 240

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++++ MS +G +KP L TYN ++   C +     A  V ++M + G+ PD  TYNT+   
Sbjct: 241 EVMNSMSGKG-LKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVE 299

Query: 258 YAQNGEADQAEEVIVEMEHNGVQP--------------NG------------RTCG---- 287
             +N    +A+++  +M H GV P              NG            +T G    
Sbjct: 300 SCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPD 359

Query: 288 -----IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
                I+I+GYC+ G + EAL     M E G   ++V +N ++ G  +       + +  
Sbjct: 360 NVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFD 419

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M E  V PD  T++T+++     G M K   +F  M +  IKPD   Y+IL  G+ +  
Sbjct: 420 EMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTT 479

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           E EKA EL   MI     PN + +  +++G+C+ G +  A  ++D+M   G+ P L T  
Sbjct: 480 EMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCN 539

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           T++ GY  +    +A+E L  M + GV P   T+
Sbjct: 540 TVIKGYCRSGDLSKADEFLGKMISEGVGPDSITY 573



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 193/387 (49%), Gaps = 15/387 (3%)

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
           R   + S++S     G+D  ++ F+ +I ++ ++  + E  DTF  ++  G   + +  N
Sbjct: 97  RVEIVESLISMSSTCGVD--NLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACN 154

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           +L+ G    G  + + ++ + ++R G ++ N+ T N++V A C +  I +    +  M  
Sbjct: 155 SLLGGLVKMGWVDLAWEVYNEIARSG-IELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQ 213

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G+  D+VTYNT+  AY + G   +A EV+  M   G++P   T   +I+G CK+G+   
Sbjct: 214 KGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVR 273

Query: 302 ALRFARTMKEYGVHPNLVIFNLLI------KGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           A      M   G+ P+   +N L+        F+E  D      + + M    V+PD+I+
Sbjct: 274 AKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKD------IFSDMLHRGVSPDLIS 327

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           +S+++   S  G +D+    F DM  +G+ PD   Y+IL  GY R     +A E+   M+
Sbjct: 328 FSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKML 387

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           E G   +VV + TI++G C    +  A  +FD+M E GV P+  TF TL+ G+ +     
Sbjct: 388 EQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMG 447

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEA 502
           +A  +  IM    + P   T+ +L + 
Sbjct: 448 KALSLFGIMTQKNIKPDIVTYNILIDG 474



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/305 (20%), Positives = 128/305 (41%), Gaps = 35/305 (11%)

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
            +++L+R++   + + E  +    +   G    +   N++     + G  D A EV  E+
Sbjct: 117 VFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEI 176

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
             +G++ N  T  I+++  CK+ KI +   F   M++ G+                    
Sbjct: 177 ARSGIELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFA------------------ 218

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
                            D++TY+T++NA+   G + +  E+ + M   G+KP    Y+ +
Sbjct: 219 -----------------DIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPTLFTYNAV 261

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G  ++    +A+ +   M+  G  P+   + T++   C + +   A ++F  M   GV
Sbjct: 262 INGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGV 321

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
           SP+L +F +L+   S      +A    + MK  G+ P    + +L       G+  EA  
Sbjct: 322 SPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNGMMSEALE 381

Query: 515 ILSKI 519
           I  K+
Sbjct: 382 IRDKM 386



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 30/67 (44%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N    +G+ QEA+ I   +IE G  P   TYTTL+     Q           ++ + G
Sbjct: 611 ILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFRFHDEMLQRG 670

Query: 138 MDPDSIF 144
             PD  F
Sbjct: 671 FVPDDDF 677


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 223/442 (50%), Gaps = 6/442 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +  KL+  L+  G    A  I+  ++ GG + ++ T   ++ AL   ++F ++   +
Sbjct: 221 SINACNKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFL 280

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S +E  G+  D + +N +INA+   G +EEA          G+ P   TYN ++ G    
Sbjct: 281 SDMEGKGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKI 340

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK + +  +L  M + G + PN  TYN L+   C   NI EA  +  +M+  G+ PD+V+
Sbjct: 341 GKYDRAKDVLIEMLQLG-LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVS 399

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           ++++    A+NG   QA     EME +G+ P+     I+I G+C+ G + +AL+    M 
Sbjct: 400 FSSLIGVLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEML 459

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G   ++V +N  + G  +       D +   M E  + PD  T++T++  +   G MD
Sbjct: 460 ARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMD 519

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +F+ M +  +KPD   Y+ L  G+ +  E  +A+EL   MI     P+ + + T++
Sbjct: 520 KALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVL 579

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+CS G +  A+ + D+M E G+ PNL T  TL+ GY  +    +A E L  M + G+ 
Sbjct: 580 NGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGII 639

Query: 491 PQKSTFLLLAEARRATGLTKEA 512
           P   ++  L +     G  KEA
Sbjct: 640 PDSFSYNTLID-----GYLKEA 656



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 216/438 (49%), Gaps = 1/438 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N+    G  +EA  + N+    G +P L+TY  +L  L    +++    ++ ++ + G
Sbjct: 298 LINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLG 357

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P++  +N ++       N+ EA + F +M   G+ P   ++++LI      G   +++
Sbjct: 358 LTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQAL 417

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M R G V  N+  Y +L+  +C    +++A  +  +M A G   DVVTYNT    
Sbjct: 418 MHFREMERSGIVPDNV-IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNG 476

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +      A+ +  EM   G+ P+  T   +I GYCK+G + +AL     M    + P+
Sbjct: 477 LCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPD 536

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +N LI GF +  +     E+   M    + PD I+Y T++N + ++G + +   + D
Sbjct: 537 KVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCD 596

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + GI+P+    + L KGY R  +  KA E L  MI +G  P+   + T+I G+  + 
Sbjct: 597 QMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEA 656

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
           ++++A  + ++M + G+  N+ T+  ++ G+    +   AE++L+ M   G++P  +T+ 
Sbjct: 657 NLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYS 716

Query: 498 LLAEARRATGLTKEAKRI 515
            L     +    KEA R 
Sbjct: 717 SLINGHVSQDNMKEAFRF 734



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 197/380 (51%), Gaps = 1/380 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  +  R    EAQ IF+ +   G  P LV++++L+  L              ++E +G
Sbjct: 368 LLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSG 427

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD++ +  +I+ F  +G + +A+    +M   G      TYNT + G        ++ 
Sbjct: 428 IVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADAD 487

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L + M   G V P+  T+  L+R +C + N+ +A N+   M  + +KPD VTYNT+   
Sbjct: 488 MLFNEMVERGMV-PDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDG 546

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + GE  +A+E+  +M    + P+  + G +++G+C  G + EAL     M E G+ PN
Sbjct: 547 FCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPN 606

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           LV  N LIKG+    D     E L+ M    + PD  +Y+T+++ +     ++K   + +
Sbjct: 607 LVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILIN 666

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K G++ +   Y+++  G+  E + ++AE++L  MIE G +P+   ++++I+G  S  
Sbjct: 667 EMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQD 726

Query: 438 SMDRAIEVFDKMCEHGVSPN 457
           +M  A    D+M + G+ P+
Sbjct: 727 NMKEAFRFHDEMLQRGLVPD 746



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 189/383 (49%), Gaps = 13/383 (3%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++     +G ++ A + + ++   G+     T N ++       K E  +  L  M  
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G V  ++ TYN L+ A+C E  + EA+ +++  ++ GM+P ++TYN I     + G+ D
Sbjct: 286 KG-VFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYD 344

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A++V++EM   G+ PN  T   ++   C+   I EA      M   GV P+LV F+ LI
Sbjct: 345 RAKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLI 404

Query: 326 KGFVEIMDRDGVDEVLALMKEFR------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
                ++ R+G   +   +  FR      + PD + Y+ +++ +   G +    ++ D+M
Sbjct: 405 G----VLARNG--HLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEM 458

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G   D   Y+    G  +++    A+ L   M+E G  P+   FTT+I G+C DG+M
Sbjct: 459 LARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNM 518

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D+A+ +F+ M    + P+  T+ TL+ G+ +A +  RA+E+   M    + P   ++  +
Sbjct: 519 DKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTV 578

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
                ++GL  EA  +  ++  K
Sbjct: 579 LNGFCSSGLLPEALNLCDQMLEK 601



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 182/384 (47%), Gaps = 7/384 (1%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           + ++ ++  + ++  + E  + F  ++  G++ + +  N L+ G    G  + + ++   
Sbjct: 188 LIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGE 247

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           + R G ++ N+ T N++V A C ++        +  M   G+  D+VTYNT+  AY + G
Sbjct: 248 VVR-GGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREG 306

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
             ++A +++      G++P   T   I+ G CK GK   A      M + G+ PN   +N
Sbjct: 307 LVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYN 366

Query: 323 LLIKGFVEIMDRDGV---DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            L+   VEI  RD +    E+   M    V PD++++S+++   +  G + +    F +M
Sbjct: 367 TLL---VEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREM 423

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            ++GI PD   Y+IL  G+ R      A ++   M+  G   +VV + T ++G C     
Sbjct: 424 ERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMF 483

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             A  +F++M E G+ P+  TF TL+ GY +     +A  + + M    + P K T+  L
Sbjct: 484 ADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTL 543

Query: 500 AEARRATGLTKEAKRILSKIKNKE 523
            +     G    AK +   +  K+
Sbjct: 544 IDGFCKAGEMGRAKELWDDMIRKD 567



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 105/207 (50%), Gaps = 1/207 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   + G+   A+ +++++I     P  ++Y T+L             ++  Q+ E G
Sbjct: 543 LIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKG 602

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ +  N +I  +  SG+M +A +   KM  +G+ P + +YNTLI GY      E++ 
Sbjct: 603 IRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAF 662

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L++ M + G ++ N+ TYN+++  +C E  + EA  V+ KM   G+ PD  TY+++   
Sbjct: 663 ILINEMEKRG-LQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLING 721

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGR 284
           +       +A     EM   G+ P+ R
Sbjct: 722 HVSQDNMKEAFRFHDEMLQRGLVPDDR 748



 Score = 43.5 bits (101), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 22/102 (21%), Positives = 51/102 (50%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L++  ++    ++A  + N + + G + +++TY  +L     + +      ++ ++
Sbjct: 644 SYNTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKM 703

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTP 175
            E G++PD   ++++IN      NM+EA     +M + GL P
Sbjct: 704 IEIGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVP 745


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 241/448 (53%), Gaps = 1/448 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + ++N   + G   +  + +N +++    P++VTY +++AAL   +  +    +++
Sbjct: 88  VVSYSTVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLT 147

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + ++G+ PD + +N++++ F  SG  +EA+    KM+  G+ P   TYN+L+      G
Sbjct: 148 TMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG 207

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G +KP + TY  L++ +  +  + E   ++  M  +G+ P+   +
Sbjct: 208 RCTEARKIFDSMTKRG-LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 266

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  AYA+  + ++A  V  +M   G+ PN  T G +I   CK G++++A+ +   M +
Sbjct: 267 SILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMID 326

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P  +++N LI G       +  +E++  M +  +  + I +++I+++    G + +
Sbjct: 327 EGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIE 386

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +++FD M + G+KPD   YS L  GY    + ++A +LL +M+  G  P+ V ++T+I+
Sbjct: 387 SEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLIN 446

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C    M  A+ +F +M   GVSP++ T+  ++ G  + R+   A+E+   +   G   
Sbjct: 447 GYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQL 506

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
           + ST+ ++        LT +A R+   +
Sbjct: 507 ELSTYNIILHGLCKNKLTDDALRMFQNL 534



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 217/413 (52%), Gaps = 10/413 (2%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD--PDSIFFN 146
           ++A+ +F+ L+  G  P + +Y  LL  L  + R      ++  + ++G D  PD + ++
Sbjct: 34  EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            VIN F + G++++   T+ +M +  ++P   TYN++I     A   ++++++L  M + 
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G V P+  TYN +V  +C+     EA   + KM + G++PDVVTYN++     +NG   +
Sbjct: 153 G-VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 211

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A ++   M   G++P   T G ++ GY  +G + E       M   G+HPN  +F++L+ 
Sbjct: 212 ARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 271

Query: 327 GFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
            + +   ++ V+E + +  + R   +NP+ +TY  ++     +G ++     F+ M   G
Sbjct: 272 AYAK---QEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 328

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           + P    Y+ L  G     + E+AEEL++ M++ G   N + F +II   C +G +  + 
Sbjct: 329 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 388

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           ++FD M   GV P++ T+ TL+ GY  A +   A ++L  M + G+ P   T+
Sbjct: 389 KLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTY 441



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 168/354 (47%), Gaps = 4/354 (1%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           L + G+ ++A   F  +I+ G  P  + Y +L+  L    ++     ++ ++ + G+  +
Sbjct: 308 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 367

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           +IFFN++I++  + G + E+   F  M   G+ P   TY+TLI GY +AGK +E+ KLL 
Sbjct: 368 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLA 427

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M   G +KP+  TY+ L+  +C    + +A  +  +M +SG+ PD++TYN I     Q 
Sbjct: 428 SMVSVG-MKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGLFQT 486

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
                A+E+ V +  +G Q    T  II+ G CK     +ALR  + +    +      F
Sbjct: 487 RRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTF 546

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N++I   +++   D   ++        + P+  TY  +       G +++  ++F  M  
Sbjct: 547 NIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMED 606

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH---PNVVIFTTIISG 432
            G   D+   + + +  ++  E  +A   L  + E  F        +F  ++SG
Sbjct: 607 NGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 660



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 131/260 (50%), Gaps = 3/260 (1%)

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG--VHPNLVIFN 322
           + A  V  E+   G+ P+  +  I+++G C E + +EAL     M + G    P++V ++
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            +I GF +  D D        M + R++P+V+TY++I+ A   A  +DK  E+   M K+
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ PD   Y+ +  G+    +P++A   L  M   G  P+VV + +++   C +G    A
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            ++FD M + G+ P + T+ TL+ GY+          +L +M   G+HP    F +L  A
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 503 RRATGLTKEAKRILSKIKNK 522
                  +EA  + SK++ +
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQ 292



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 56/267 (20%), Positives = 136/267 (50%), Gaps = 1/267 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++  C        +++S  + G+  E++ +F+ ++  G KP ++TY+TL+    +  + 
Sbjct: 360 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 419

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +++ +   GM PD + ++ +IN + +   M++A+  F +M+ SG++P   TYN +
Sbjct: 420 DEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNII 479

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++G     +   + +L   +++ G  +  L TYN+++   C  K   +A  +   +    
Sbjct: 480 LQGLFQTRRTAAAKELYVGITKSGR-QLELSTYNIILHGLCKNKLTDDALRMFQNLCLMD 538

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           +K +  T+N +  A  + G  D+A+++ V    NG+ PN  T  ++      +G ++E  
Sbjct: 539 LKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 598

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +   +M++ G   +  + N +++  ++
Sbjct: 599 QLFLSMEDNGCTVDSGMLNFIVRELLQ 625


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  218 bits (556), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 223/445 (50%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N L +  +  +A  +   +++ G  P++ +Y T+L       R  +   ++ Q+   G
Sbjct: 236 MINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRG 295

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + +  VIN   +   ++EA     KM + G  P   TY TL+ G+   G  + +V
Sbjct: 296 CPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAV 355

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+  M+  G  +PN  TYN ++  +C   ++  A  V+  M  +G  PD + Y+TI + 
Sbjct: 356 ELVRKMTERG-YRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISG 414

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G+  +A +++ +M   G +P+      +I   CK   I  A    R        P+
Sbjct: 415 FCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPD 474

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +++LI    +       +  L +M + R  PDV+TY+++++    +  ++    +FD
Sbjct: 475 VVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFD 534

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M  AG+ PD   YSI+   + ++   + A ++L  M E+   P+VV ++ +I+G C  G
Sbjct: 535 RMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAG 594

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
           ++D+A +VF +M   G +PNL T+ TL+ G  +  +  +A E+L+IM+     P   T+ 
Sbjct: 595 TVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYT 654

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L          +EA R+L ++K+K
Sbjct: 655 CLINGLCNASRLEEAWRVLREMKDK 679



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 231/442 (52%), Gaps = 2/442 (0%)

Query: 72   VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
            V + + +++SL++ GK  +A  +  +++  G  P++VTY++LL  L    + +   +++ 
Sbjct: 948  VFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQ 1007

Query: 132  QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++  +G  P+ + +N +I+   + G ++EA     +M + G  P   TY  L+  +   G
Sbjct: 1008 RMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG 1067

Query: 192  KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
            K E+++ L+++M  +G V PNL TYN L+  +C +  +  A  ++  M   G  P+VV+Y
Sbjct: 1068 KAEDAIGLVEVMVEKGYV-PNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSY 1126

Query: 252  NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            NT+     +  +  +   ++ +M  N   P+  T   II   CK  ++  A      ++E
Sbjct: 1127 NTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE 1186

Query: 312  YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM-KEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PNLV +N L+ G  +    D  + +L  M ++   +PD+ITY+T+++    +  +D
Sbjct: 1187 SGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVD 1246

Query: 371  KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
            +  ++F  M   G+ PD   YSI+     + +  ++A  +L  M+++GF P  + + T+I
Sbjct: 1247 RAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLI 1306

Query: 431  SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
             G+C  G++D+A+E+   +   G  P++ TF   +   S+  +  +A E+L+ M   G+ 
Sbjct: 1307 DGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLV 1366

Query: 491  PQKSTFLLLAEARRATGLTKEA 512
            P   T+  L +      LT++A
Sbjct: 1367 PDTVTYNTLLKGFCDASLTEDA 1388



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 219/447 (48%), Gaps = 14/447 (3%)

Query: 67   ESCRTVRSM------------TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL 114
            ++CR V  M            + L++ L + GK  EA A+   +   G  P++VTY T++
Sbjct: 966  DACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTII 1025

Query: 115  AALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT 174
                   R +  + ++ ++ + G  P+ + +  +++AF + G  E+A+     M E G  
Sbjct: 1026 DGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYV 1085

Query: 175  PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
            P   TYN+L+  +    + E + +LL  M ++G V PN+ +YN ++   C    + E   
Sbjct: 1086 PNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCV-PNVVSYNTVIAGLCKATKVHEGVL 1144

Query: 235  VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
            ++ +M ++   PD+VT+NTI  A  +    D A E+   ++ +G  PN  T   ++ G C
Sbjct: 1145 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC 1204

Query: 295  KEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
            K  +  +A    R M ++ G  P+++ +N +I G  +    D   ++   M    + PD 
Sbjct: 1205 KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD 1264

Query: 354  ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
            +TYS ++++     FMD+   + + M K G  P A  Y  L  G+ +    +KA E+L  
Sbjct: 1265 VTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQL 1324

Query: 414  MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
            ++  G +P+VV F+  I      G + +A E+ + M   G+ P+  T+ TL+ G+ +A  
Sbjct: 1325 LLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASL 1384

Query: 474  PWRAEEILQIMKAFGVHPQKSTFLLLA 500
               A ++ ++M+  G  P  +T+  L 
Sbjct: 1385 TEDAVDLFEVMRQCGCEPDNATYTTLV 1411



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/464 (26%), Positives = 237/464 (51%), Gaps = 10/464 (2%)

Query: 65   NKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
            NK  C   + + T L++ L   G    A  +   +   G   +++ +  ++  L   ++ 
Sbjct: 869  NKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVVIKGLCSARKL 928

Query: 124  NSIHSIMSQVEENGMDPDSIF-FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +S   +  ++EE+G  P  +F ++ ++++  +SG +++A      M   G +P   TY++
Sbjct: 929  DSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSS 988

Query: 183  LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
            L+ G   AGK +E+  LL  M+R G   PN+ TYN ++   C    I EA++++ +M   
Sbjct: 989  LLHGLCKAGKLDEATALLQRMTRSG-CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDG 1047

Query: 243  GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            G +P+VVTY  +  A+ + G+A+ A  ++  M   G  PN  T   ++  +CK+ +++ A
Sbjct: 1048 GCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERA 1107

Query: 303  LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTI 359
             +   +M + G  PN+V +N +I G  +      V E + L+++   N   PD++T++TI
Sbjct: 1108 CQLLSSMIQKGCVPNVVSYNTVIAGLCKATK---VHEGVLLLEQMLSNNCVPDIVTFNTI 1164

Query: 360  MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI-ESG 418
            ++A      +D   E+F+ + ++G  P+   Y+ L  G  + +  ++AE LL  M  + G
Sbjct: 1165 IDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQG 1224

Query: 419  FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
              P+++ + T+I G C    +DRA ++F +M   G++P+  T+  ++    + R    A 
Sbjct: 1225 CSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEAN 1284

Query: 479  EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             +L++M   G  P   T+  L +    TG   +A  IL  + +K
Sbjct: 1285 NVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSK 1328



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 207/415 (49%), Gaps = 1/415 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N L +  +  EA  + + +I+ G +P+++TY TL+         +    ++ 
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 359

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E G  P++I +N +++ F    +ME A      M ++G  P    Y+T+I G+  AG
Sbjct: 360 KMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAG 419

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  E+  LL+ M R G  +P++   + L+ A C    I  A  ++         PDVV Y
Sbjct: 420 KLREAHDLLEQMIRRG-CRPDVACLSTLIDALCKAAAIDSAQELLRMSIGMDCAPDVVAY 478

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  A  +     +AE  +  M  N   P+  T   ++ G CK  +I +A      M+ 
Sbjct: 479 SILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRINDAFLLFDRMRA 538

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P++V ++++I  F +  + D   ++L  MKE +  PDV+TYS ++N    AG +DK
Sbjct: 539 AGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALINGLCKAGTVDK 598

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++F +M   G  P+   Y+ L  G  +  + E+A E+L  M +    P+ + +T +I+
Sbjct: 599 AFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTPDSITYTCLIN 658

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           G C+   ++ A  V  +M + G  P+  T+ TL+    +       E++L+ M+A
Sbjct: 659 GLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQKTNNLELVEQLLKEMEA 713



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 220/441 (49%), Gaps = 3/441 (0%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
            ++  L    K   A  +F  + E G   P + TY+T++ +L    + +    ++  +   
Sbjct: 918  VIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSK 977

Query: 137  GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            G  P+ + ++++++   ++G ++EA     +M  SG +P   TYNT+I G+   G+ +E+
Sbjct: 978  GCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEA 1037

Query: 197  VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
              LL+ M  +G  +PN+ TY VL+ A+C      +A  ++  M   G  P++ TYN++  
Sbjct: 1038 YHLLEEMV-DGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLD 1096

Query: 257  AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
             + +  E ++A +++  M   G  PN  +   +I+G CK  K+ E +     M      P
Sbjct: 1097 MFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVP 1156

Query: 317  NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
            ++V FN +I    +    D   E+  L++E    P+++TY+++++    +   D+ + + 
Sbjct: 1157 DIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLL 1216

Query: 377  DDMG-KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
             +M  K G  PD   Y+ +  G  + +  ++A +L + M+  G  P+ V ++ +IS  C 
Sbjct: 1217 REMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCK 1276

Query: 436  DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
               MD A  V + M ++G  P   T+ TL+ G+ +     +A EILQ++ + G +P   T
Sbjct: 1277 WRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVT 1336

Query: 496  FLLLAEARRATGLTKEAKRIL 516
            F +  +     G  ++A  +L
Sbjct: 1337 FSIFIDWLSKRGRLRQAGELL 1357



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 223/453 (49%), Gaps = 23/453 (5%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L++   ++ + + A  + +++I+ G  P++V+Y T++A L    + +    ++ Q+  N 
Sbjct: 1094 LLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNN 1153

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              PD + FN +I+A  ++  ++ A + F  ++ESG TP   TYN+L+ G   + + +++ 
Sbjct: 1154 CVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAE 1213

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             LL  M+R+    P++ TYN ++   C  K +  A+ +  +M + G+ PD VTY+ + ++
Sbjct: 1214 YLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISS 1273

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
              +    D+A  V+  M  NG  P   T G +I G+CK G + +AL   + +   G +P+
Sbjct: 1274 LCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPD 1333

Query: 318  LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            +V F++ I    +        E+L  M    + PD +TY+T++  +  A   +   ++F+
Sbjct: 1334 VVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFE 1393

Query: 378  DMGKAGIKPDAHAYSILAKGYVREQEPEK--AEELLMTMIESGFHPN------------- 422
             M + G +PD   Y+ L  G++ +++  K    E+  +M+++GF  N             
Sbjct: 1394 VMRQCGCEPDNATYTTLV-GHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEV 1452

Query: 423  ---VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
               V +   I+  +   GS   A +VF+ M +     N+  +  ++  Y   +Q  +A  
Sbjct: 1453 EADVRLGCAIVDMFGKCGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAFG 1508

Query: 480  ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            + ++M   GV P   TFL L       GL   A
Sbjct: 1509 LWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAA 1541



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/480 (23%), Positives = 215/480 (44%), Gaps = 41/480 (8%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIE--GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           K++  LI+ G    A  +F    E   G++  +     LL  L    +++  H +     
Sbjct: 98  KVLQRLIDPG----AALVFFEWAETRDGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRI 153

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT-------------------- 174
           E     D++ ++ +I+ F  +G +  A + F +M   GL                     
Sbjct: 154 EGQWGGDTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCS 213

Query: 175 --------------PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
                         P + TYNT+I G   + + +++++LL+ M   G   PN+ +YN ++
Sbjct: 214 DAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG-FAPNVFSYNTVL 272

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
             +C    +  A  ++ +M   G  PDVV+Y T+     +  + D+A  V+ +M   G Q
Sbjct: 273 HGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQ 332

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           PN  T G ++ G+C+ G +  A+   R M E G  PN + +N ++  F    D +   +V
Sbjct: 333 PNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQV 392

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L +M +    PD I YSTI++ +  AG + +  ++ + M + G +PD    S L     +
Sbjct: 393 LQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCK 452

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
               + A+ELL   I     P+VV ++ +I   C    +  A    D M ++   P++ T
Sbjct: 453 AAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVT 512

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           + +++ G  ++R+   A  +   M+A GV P   T+ ++  +         A ++L ++K
Sbjct: 513 YNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMK 572



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 194/398 (48%), Gaps = 7/398 (1%)

Query: 102  GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM--DPDSIFFNAVINAFSESGNME 159
            G+     T   LL AL   KR         QV  N +   P+   F  +I+    +G++ 
Sbjct: 839  GYNHDTYTCNCLLQALLRLKRPKD----ALQVYRNKLCCSPNMFTFTILIHGLCRAGDIG 894

Query: 160  EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
             A +   +M   G+      +N +IKG   A K + +++L   M   G+  P++ TY+ +
Sbjct: 895  TAYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTI 954

Query: 220  VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
            V +      + +A  ++  M + G  P+VVTY+++     + G+ D+A  ++  M  +G 
Sbjct: 955  VDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGC 1014

Query: 280  QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
             PN  T   II G+CK G+I EA      M + G  PN+V + +L+  F +    +    
Sbjct: 1015 SPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIG 1074

Query: 340  VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
            ++ +M E    P++ TY+++++ +     +++  ++   M + G  P+  +Y+ +  G  
Sbjct: 1075 LVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLC 1134

Query: 400  REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
            +  +  +   LL  M+ +   P++V F TII   C    +D A E+F+ + E G +PNL 
Sbjct: 1135 KATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLV 1194

Query: 460  TFETLMWGYSEARQPWRAEEILQIM-KAFGVHPQKSTF 496
            T+ +L+ G  ++R+  +AE +L+ M +  G  P   T+
Sbjct: 1195 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITY 1232



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 190/390 (48%), Gaps = 4/390 (1%)

Query: 135  ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
            + G + D+   N ++ A       ++A+  +    +   +P   T+  LI G   AG   
Sbjct: 837  QEGYNHDTYTCNCLLQALLRLKRPKDALQVY--RNKLCCSPNMFTFTILIHGLCRAGDIG 894

Query: 195  ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-MKPDVVTYNT 253
             + +LL  M R G V  N+  +NV+++  C+ + +  A  +  +M  SG   PDV TY+T
Sbjct: 895  TAYELLKEMPRHG-VPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYST 953

Query: 254  IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
            I  +  ++G+ D A  ++ +M   G  PN  T   ++ G CK GK+ EA    + M   G
Sbjct: 954  IVDSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG 1013

Query: 314  VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              PN+V +N +I G  ++   D    +L  M +    P+V+TY+ +++A+   G  +   
Sbjct: 1014 CSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAI 1073

Query: 374  EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
             + + M + G  P+   Y+ L   + ++ E E+A +LL +MI+ G  PNVV + T+I+G 
Sbjct: 1074 GLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGL 1133

Query: 434  CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
            C    +   + + ++M  +   P++ TF T++    +  +   A E+  +++  G  P  
Sbjct: 1134 CKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNL 1193

Query: 494  STFLLLAEARRATGLTKEAKRILSKIKNKE 523
             T+  L      +    +A+ +L ++  K+
Sbjct: 1194 VTYNSLVHGLCKSRRFDQAEYLLREMTRKQ 1223



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/391 (20%), Positives = 176/391 (45%), Gaps = 36/391 (9%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            +++ L +  +   A  +F  ++  G  P  VTY+ ++++L   +  +  ++++  + +NG
Sbjct: 1235 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 1294

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             DP +I +  +I+ F ++GN+++A++    +   G  P   T++  I      G+  ++ 
Sbjct: 1295 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 1354

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA-- 255
            +LL+ M R G V P+  TYN L++ +C+     +A ++   M   G +PD  TY T+   
Sbjct: 1355 ELLETMLRAGLV-PDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGH 1413

Query: 256  --------------------TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
                                T +  N E     E  +E     V+ + R    I+  + K
Sbjct: 1414 LVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIE-----VEADVRLGCAIVDMFGK 1468

Query: 296  EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
             G  ++A +    M +     N+V+++ ++  +V     +    +  +M    V PD +T
Sbjct: 1469 CGSPQDARKVFEGMDQR----NVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVT 1524

Query: 356  YSTIMNAWSTAGFMDKCKEIFDDMGK-AGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
            + +++     AG +D   + F  + +  G++P    +S +     R     +AE+L++ M
Sbjct: 1525 FLSLLTMCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLMLGM 1584

Query: 415  IESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
                  P+   +  ++S +   G  +RA+ V
Sbjct: 1585 ---PCKPSAATWNCLLSAYKICGDFERALRV 1612



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 61/355 (17%), Positives = 139/355 (39%), Gaps = 67/355 (18%)

Query: 64   MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
            ++K S   V + +  ++ L +RG+ ++A  +   ++  G  P  VTY TLL         
Sbjct: 1326 LSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLT 1385

Query: 124  NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM--------DTFWKMKESGLTP 175
                 +   + + G +PD+  +  ++    +  + ++ +        DT +K+     + 
Sbjct: 1386 EDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSK 1445

Query: 176  TTSTYNT---------LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
              ++            ++  +G  G P+++ K+      EG  + N+  ++ ++  +   
Sbjct: 1446 LEASIEVEADVRLGCAIVDMFGKCGSPQDARKVF-----EGMDQRNVVLWSAMLGVYVFH 1500

Query: 227  KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
            K   +A+ +   M   G++PD VT+ ++ T     G  D A +                 
Sbjct: 1501 KQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVD----------------- 1543

Query: 287  GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMK 345
                              F    ++YG+ P +  F+ +I    +++ R G V+E   LM 
Sbjct: 1544 -----------------EFVSISRDYGLEPGVDHFSCVI----DLLGRLGLVNEAEDLML 1582

Query: 346  EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
                 P   T++ +++A+   G  ++   +      A + P   +Y +L+  Y +
Sbjct: 1583 GMPCKPSAATWNCLLSAYKICGDFERALRV------AELNPTQASYLLLSNMYAQ 1631


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 219/404 (54%), Gaps = 1/404 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   ++N L + GK ++A+    ++   G KP++VTY T++       R  +  +I+
Sbjct: 220 SVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAIL 279

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + ++   ++PDS  + ++I+   + G +EEA   F +M + GL P+   YNTLI G+   
Sbjct: 280 TTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNK 339

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  + +    D M ++G + P + TYN L+ A   E+   EA  ++ ++   G+ PD +T
Sbjct: 340 GNLDMASAYKDEMLKKG-ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAIT 398

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +   Y +   A +A  +  EM  +G++P  +T   ++    K+ ++KEA    + + 
Sbjct: 399 YNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKIT 458

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             GV P++++FN LI G     +  G  E+L  M   +V PD +T++TIM      G ++
Sbjct: 459 SEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVE 518

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +E+FD+M + GIKPD  +++ L  GY R  + + A  +   M+++GF+P V+ +  ++
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALV 578

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
            G C +   D A E+  +M   G++P+  T+ TL+ G ++   P
Sbjct: 579 QGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIP 622



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 201/409 (49%), Gaps = 36/409 (8%)

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           SI F+ +I +  +    +EA + F+ MKE G+ PT  T N+L+  +    + E +  L  
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M R   +K ++ T+N+++   C E  + +A + +  M  SG+KP++VTYNTI   Y  +
Sbjct: 211 EMFRL-RIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           G  + A+ ++  M+   ++P+  T G +ISG CK+G+++EA +    M + G+ P+ VI+
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 322 NLLIKGFV------------EIMDRDGV--------------------DEVLALMKEFR- 348
           N LI GF             + M + G+                    DE   ++KE + 
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 349 --VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             ++PD ITY+ ++N +       K   + D+M  +GIKP    Y+ L     ++   ++
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A++L   +   G  P+V++F  +I G CS+ ++  A E+   M    V P+  TF T+M 
Sbjct: 450 ADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           G+    +   A E+   MK  G+ P   +F  L       G  K+A R+
Sbjct: 510 GHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV 558



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 216/443 (48%), Gaps = 1/443 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L++  ++  + + A  ++  +     K S+ T+  ++  L  + +       +
Sbjct: 185 TIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFV 244

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +E +G+ P+ + +N +++ +  SG +E A      MK   + P + TY +LI G    
Sbjct: 245 GHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQ 304

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ EE+ K+ + M ++G ++P+   YN L+  +CN+ N+  A     +M   G+ P + T
Sbjct: 305 GRLEEASKIFEEMVQKG-LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMST 363

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++  A       D+AE +I E++  G+ P+  T  I+I+GYC+    K+A      M 
Sbjct: 364 YNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEML 423

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P    +  L+    +       D++   +    V PDVI ++ +++   +   + 
Sbjct: 424 ASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVK 483

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              E+  DM +  + PD   ++ + +G+ RE + E+A EL   M   G  P+ + F T+I
Sbjct: 484 GAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           SG+   G +  A  V ++M + G +P + T+  L+ G  + ++   AEE+L+ M + G+ 
Sbjct: 544 SGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMT 603

Query: 491 PQKSTFLLLAEARRATGLTKEAK 513
           P  +T+  L E      +  E K
Sbjct: 604 PDDTTYFTLIEGIAKVNIPDENK 626



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 93/193 (48%)

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           I+E   F    ++     + ++F+ LIK   ++   D   E    MKE  V P + T ++
Sbjct: 132 IREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNS 191

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++ +      +    ++ +M +  IK   + ++I+     +E + +KA++ +  M  SG
Sbjct: 192 LLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSG 251

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PN+V + TI+ G+CS G ++ A  +   M    + P+  T+ +L+ G  +  +   A 
Sbjct: 252 VKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEAS 311

Query: 479 EILQIMKAFGVHP 491
           +I + M   G+ P
Sbjct: 312 KIFEEMVQKGLRP 324


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 129/464 (27%), Positives = 239/464 (51%), Gaps = 6/464 (1%)

Query: 61  SFCMNKE----SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAA 116
           SFC  +     S R +    +L + L++  K  +A  +F ++I     P+++ ++ L +A
Sbjct: 39  SFCCERGFSAFSDRNLSYRERLRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSA 97

Query: 117 LTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPT 176
           +   K+++ + ++  Q+E  G+  +    + +IN F     +  A     K+ + G  P 
Sbjct: 98  IAKTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPN 157

Query: 177 TSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
           T T++TLI G  + G+  E+++L+D M   G+ KP+L T N LV   C      EA  ++
Sbjct: 158 TITFSTLINGLCLEGRVSEALELVDRMVEMGH-KPDLITINTLVNGLCLSGKEAEAMLLI 216

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
            KM   G +P+ VTY  +     ++G+   A E++ +ME   ++ +     III G CK 
Sbjct: 217 DKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKH 276

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
           G +  A      M+  G+  N++ +N+LI GF      D   ++L  M + ++NP+V+T+
Sbjct: 277 GSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTF 336

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           S +++++   G + + +E+  +M   GI PD   Y+ L  G+ +E   +KA +++  M+ 
Sbjct: 337 SVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVS 396

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G  PN+  F  +I+G+C    +D  +E+F KM   GV  +  T+ TL+ G+ E  +   
Sbjct: 397 KGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNV 456

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           A+E+ Q M +  V P   T+ +L +     G +++A  I  KI+
Sbjct: 457 AKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIE 500



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 228/445 (51%), Gaps = 3/445 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+N L   GK  EA  + + ++E G +P+ VTY  +L  +    +      ++ ++
Sbjct: 195 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 254

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           EE  +  D++ ++ +I+   + G+++ A + F +M+  G+T    TYN LI G+  AG+ 
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 314

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
           ++  KLL D++ R+  + PN+ T++VL+ ++  E  + EA  +  +M   G+ PD +TY 
Sbjct: 315 DDGAKLLRDMIKRK--INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 372

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++   + +    D+A +++  M   G  PN RT  I+I+GYCK  +I + L   R M   
Sbjct: 373 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR 432

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           GV  + V +N LI+GF E+   +   E+   M   +V P+++TY  +++     G  +K 
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            EIF+ + K+ ++ D   Y+I+  G     + + A +L  ++   G  P V  +  +I G
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 552

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G +  A  +F KM E G +P+  T+  L+  +       ++ ++++ +K  G    
Sbjct: 553 LCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 612

Query: 493 KSTFLLLAEARRATGLTKEAKRILS 517
            ST  ++ +      L K    +LS
Sbjct: 613 ASTIKMVIDMLSDGRLKKSFLDMLS 637



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 221/447 (49%), Gaps = 1/447 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L+N L   G+  EA  + + ++E GHKP L+T  TL+  L +  +      ++ ++
Sbjct: 160 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 219

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E G  P+++ +  V+N   +SG    AM+   KM+E  +      Y+ +I G    G  
Sbjct: 220 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 279

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + +  L + M  +G +  N+ TYN+L+  +CN     +   ++  M    + P+VVT++ 
Sbjct: 280 DNAFNLFNEMEMKG-ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSV 338

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  ++ + G+  +AEE+  EM H G+ P+  T   +I G+CKE  + +A +    M   G
Sbjct: 339 LIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKG 398

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             PN+  FN+LI G+ +    D   E+   M    V  D +TY+T++  +   G ++  K
Sbjct: 399 CDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAK 458

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+F +M    + P+   Y IL  G     E EKA E+   + +S    ++ I+  II G 
Sbjct: 459 ELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGM 518

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C+   +D A ++F  +   GV P +KT+  ++ G  +      AE + + M+  G  P  
Sbjct: 519 CNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDG 578

Query: 494 STFLLLAEARRATGLTKEAKRILSKIK 520
            T+ +L  A    G   ++ +++ ++K
Sbjct: 579 WTYNILIRAHLGDGDATKSVKLIEELK 605



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/232 (22%), Positives = 115/232 (49%), Gaps = 2/232 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +R+   L+N   +  +  +   +F  +   G     VTY TL+       + N    +  
Sbjct: 403 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 462

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++    + P+ + +  +++   ++G  E+A++ F K+++S +      YN +I G   A 
Sbjct: 463 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 522

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +++  L   +  +G VKP ++TYN+++   C +  ++EA  +  KM   G  PD  TY
Sbjct: 523 KVDDAWDLFCSLPLKG-VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 581

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           N +  A+  +G+A ++ ++I E++  G   +  T  ++I     +G++K++ 
Sbjct: 582 NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID-MLSDGRLKKSF 632


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  218 bits (555), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 231/452 (51%), Gaps = 26/452 (5%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ + T L+N L + G+  +A  +F++++  G +P + TY T++  L       +   ++
Sbjct: 162 TIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLL 221

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++EE G  P+ + ++ +I++      + EA+D F  MK  G++P   TY +LI+G    
Sbjct: 222 KKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKF 281

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + +E+  LL+ M+   N+ P++ T+NVLV  +C E  ++EA  V+  M   G++P+VVT
Sbjct: 282 SRWKEASALLNEMTSL-NIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVT 340

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+++   Y+   +  +A ++   M   G +PN  +  I+I+GYCK  +I EA++    M 
Sbjct: 341 YSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMI 400

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAG 367
             G+ PN V +N LI GF ++     + E   L +    N   PD+ TYS +++ +   G
Sbjct: 401 HQGLTPNNVSYNTLIHGFCQL---GKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQG 457

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
           ++ K   +F  M    +KP+   Y+IL     +    + A +L   +   G  P+V ++T
Sbjct: 458 YLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYT 517

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           TII+G C +G +D A+E F  M   G  P+  ++  ++ G            +LQ     
Sbjct: 518 TIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVIIRG------------LLQ----- 560

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             H  +S  LLL    R  G   + +  LS++
Sbjct: 561 --HKDESRALLLVGEMRDRGFIADVRPCLSEV 590



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 109/461 (23%), Positives = 225/461 (48%), Gaps = 5/461 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIE-GGHKPSLVTYTTLLAALTIQKR 122
           ++++    +    KL++++++ G+  +     +  +E  G  P++ T +  +      +R
Sbjct: 84  LHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSIFMNCFCQLQR 143

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +   S++++V + G+ P  + F  +IN   + G   +A++ F  M   G  P   TYNT
Sbjct: 144 VDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNT 203

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G    G+   +  LL  M  E   +PN+ TY+ L+ + C ++ + EA ++   M A 
Sbjct: 204 IINGLCKIGETAAAAGLLKKM-EEAGCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAK 262

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ PD+ TY ++     +     +A  ++ EM    + P+  T  +++  +CKEGK+ EA
Sbjct: 263 GISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEA 322

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L   +TM E GV PN+V ++ L+ G+    D     ++  +M      P++ +Y+ ++N 
Sbjct: 323 LGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIFSYNILING 382

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +  A  +D+  ++F++M   G+ P+  +Y+ L  G+ +  +  +A++L   M  +G  P+
Sbjct: 383 YCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPD 442

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           +  ++ ++ G+C  G + +A  +F  M    + PNL  +  L+    ++     A ++  
Sbjct: 443 LFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFS 502

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            +   G+ P    +  +       GL  EA   L   +N E
Sbjct: 503 ELFVQGLQPHVQLYTTIINGLCKEGLLDEA---LEAFRNME 540



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 96/407 (23%), Positives = 184/407 (45%), Gaps = 35/407 (8%)

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           +A S   N+++A+ +F  M      P    +  L+      G+  + V  L        +
Sbjct: 65  DASSSFRNIDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGL 124

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            PN+ T ++ +  +C  + +   ++V+ K+   G++P +VT+ T+     + GE  QA E
Sbjct: 125 SPNIYTLSIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVE 184

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  +M   G QP+  T   II+G CK G+   A    + M+E G  PN+V ++ LI    
Sbjct: 185 LFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLC 244

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITY----------------STIMNAWSTAGFMDK-- 371
                +   ++ + MK   ++PD+ TY                S ++N  ++   M    
Sbjct: 245 RDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIV 304

Query: 372 ---------CKE--------IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
                    CKE        +   M + G++P+   YS L  GY    +  +A +L   M
Sbjct: 305 TFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVM 364

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           I  G  PN+  +  +I+G+C    +D A+++F++M   G++PN  ++ TL+ G+ +  + 
Sbjct: 365 ITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKL 424

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             A+++ + M   G  P   T+ +L +     G   +A R+   +++
Sbjct: 425 REAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQS 471


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 217/425 (51%), Gaps = 35/425 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +++SL + G+  +AQ +F  + E G  P L TY +++       R++    ++ ++ E
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + PD + +NA+INAF + G   EA + + +M   G+ P T TY+++I G+    + + 
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  +  LM+ +G   PNL T+N L+  +C  K I +   ++H+M  +G+  D  TYNT+ 
Sbjct: 379 AEHMFYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY--- 312
             +   G+ + A +++ EM  +G+ P+  TC  ++ G C  GK+K+AL   + M++    
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 313 --GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
               HP    FN                          V PDV TY+ +++     G   
Sbjct: 498 LDASHP----FN-------------------------GVEPDVQTYNILISGLINEGKFL 528

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +E++++M   GI PD   YS +  G  ++   ++A ++  +M    F PNVV FTT+I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+C  G +D  +E+F +M   G+  N  T+ TL+ G+ +      A +I Q M + GV+
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 491 PQKST 495
           P   T
Sbjct: 649 PDTIT 653



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 220/453 (48%), Gaps = 16/453 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S T L+       K   A + F  L + G  P +VT+ TLL  L ++ R +   ++  
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ E    P+ + F  ++N     G + EA+    +M E GL PT  TY T++ G    G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++ LL  M    ++ PN+  Y+ ++ + C +   ++A N+  +M   G+ PD+ TY
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++   +  +G    AE+++ EM    + P+  T   +I+ + KEGK  EA      M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN + ++ +I GF +    D  + +  LM     +P++IT++T+++ +  A  +D 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+  +M + G+  D   Y+ L  G+    +   A +LL  MI SG  P++V   T++ 
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 432 GWCSDGSMDRAIEVFDKMCE-----------HGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           G C +G +  A+E+F  M +           +GV P+++T+  L+ G     +   AEE+
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            + M   G+ P   T+     +    GL K+++
Sbjct: 534 YEEMPHRGIVPDTITY-----SSMIDGLCKQSR 561



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 222/449 (49%), Gaps = 2/449 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL +   E    ++A  +F++++     PS+V +  L+  +   +R + + S+  ++E  
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            +  D   F  +I  F     +  A+ TF K+ + GL P   T+NTL+ G  +  +  E+
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSEA 168

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + L   M  E   +PN+ T+  L+   C E  I EA  ++ +M   G++P  +TY TI  
Sbjct: 169 LNLFHQMF-ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 257 AYAQNGEADQAEEVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              + G+   A  ++ +ME  + + PN      II   CK+G+  +A      M+E G+ 
Sbjct: 228 GMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+L  +N +I GF         +++L  M E +++PDV+TY+ ++NA+   G   + +E+
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL 347

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           +D+M   GI P+   YS +  G+ ++   + AE +   M   G  PN++ F T+I G+C 
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              +D  +E+  +M E G+  +  T+ TL+ G+        A ++LQ M + G+ P   T
Sbjct: 408 AKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVT 467

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKER 524
              L +     G  K+A  +   ++  ++
Sbjct: 468 CDTLLDGLCDNGKLKDALEMFKVMQKSKK 496



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 79/171 (46%), Gaps = 1/171 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++   L++ LI  GK  EA+ ++  +   G  P  +TY++++  L  Q R +    +  
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +      P+ + F  +IN + ++G +++ ++ F +M   G+     TY TLI G+   G
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
               ++ +   M   G     +   N+L   W  E+ +  A  ++ K+  S
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE-LKRAVAMLEKLQMS 680


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 217/425 (51%), Gaps = 35/425 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +++SL + G+  +AQ +F  + E G  P L TY +++       R++    ++ ++ E
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + PD + +NA+INAF + G   EA + + +M   G+ P T TY+++I G+    + + 
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  +  LM+ +G   PNL T+N L+  +C  K I +   ++H+M  +G+  D  TYNT+ 
Sbjct: 379 AEHMFYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY--- 312
             +   G+ + A +++ EM  +G+ P+  TC  ++ G C  GK+K+AL   + M++    
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 313 --GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
               HP    FN                          V PDV TY+ +++     G   
Sbjct: 498 LDASHP----FN-------------------------GVEPDVQTYNILISGLINEGKFL 528

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +E++++M   GI PD   YS +  G  ++   ++A ++  +M    F PNVV FTT+I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+C  G +D  +E+F +M   G+  N  T+ TL+ G+ +      A +I Q M + GV+
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 491 PQKST 495
           P   T
Sbjct: 649 PDTIT 653



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 222/449 (49%), Gaps = 2/449 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL +   E    ++A  +F++++     PS+V +  L+  +   +R + + S+  ++E  
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            +  D   F  +I  F     +  A+ TF K+ + GL P   T+NTL+ G  +  +  E+
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEA 168

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + L   M  E   +PN+ T+  L+   C E  I EA  ++ +M   G++P  +TY TI  
Sbjct: 169 LNLFHQMF-ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 257 AYAQNGEADQAEEVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              + G+   A  ++ +ME  + + PN      II   CK+G+  +A      M+E G+ 
Sbjct: 228 GMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+L  +N +I GF         +++L  M E +++PDV+TY+ ++NA+   G   + +E+
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL 347

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           +D+M   GI P+   YS +  G+ ++   + AE +   M   G  PN++ F T+I G+C 
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              +D  +E+  +M E G+  +  T+ TL+ G+        A ++LQ M + G+ P   T
Sbjct: 408 AKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVT 467

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKER 524
              L +     G  K+A  +   ++  ++
Sbjct: 468 CDTLLDGLCDNGKLKDALEMFKVMQKSKK 496



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 220/453 (48%), Gaps = 16/453 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S T L+       K   A + F  + + G  P +VT+ TLL  L ++ R +   ++  
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ E    P+ + F  ++N     G + EA+    +M E GL PT  TY T++ G    G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++ LL  M    ++ PN+  Y+ ++ + C +   ++A N+  +M   G+ PD+ TY
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++   +  +G    AE+++ EM    + P+  T   +I+ + KEGK  EA      M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN + ++ +I GF +    D  + +  LM     +P++IT++T+++ +  A  +D 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+  +M + G+  D   Y+ L  G+    +   A +LL  MI SG  P++V   T++ 
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 432 GWCSDGSMDRAIEVFDKMCE-----------HGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           G C +G +  A+E+F  M +           +GV P+++T+  L+ G     +   AEE+
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            + M   G+ P   T+     +    GL K+++
Sbjct: 534 YEEMPHRGIVPDTITY-----SSMIDGLCKQSR 561



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 79/171 (46%), Gaps = 1/171 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++   L++ LI  GK  EA+ ++  +   G  P  +TY++++  L  Q R +    +  
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +      P+ + F  +IN + ++G +++ ++ F +M   G+     TY TLI G+   G
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
               ++ +   M   G     +   N+L   W  E+ +  A  ++ K+  S
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE-LKRAVAMLEKLQMS 680


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 217/425 (51%), Gaps = 35/425 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +++SL + G+  +AQ +F  + E G  P L TY +++       R++    ++ ++ E
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + PD + +NA+INAF + G   EA + + +M   G+ P T TY+++I G+    + + 
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  +  LM+ +G   PNL T+N L+  +C  K I +   ++H+M  +G+  D  TYNT+ 
Sbjct: 379 AEHMFYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY--- 312
             +   G+ + A +++ EM  +G+ P+  TC  ++ G C  GK+K+AL   + M++    
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 313 --GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
               HP    FN                          V PDV TY+ +++     G   
Sbjct: 498 LDASHP----FN-------------------------GVEPDVQTYNILISGLINEGKFL 528

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +E++++M   GI PD   YS +  G  ++   ++A ++  +M    F PNVV FTT+I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+C  G +D  +E+F +M   G+  N  T+ TL+ G+ +      A +I Q M + GV+
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 491 PQKST 495
           P   T
Sbjct: 649 PDTIT 653



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 222/449 (49%), Gaps = 2/449 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL +   E    ++A  +F++++     PS+V +  L+  +   +R + + S+  ++E  
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            +  D   FN +I  F     +  A+ TF K+ + GL P   T+ TL+ G  +  +  E+
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEA 168

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + L   M  E   +PN+ T+  L+   C E  I EA  ++ +M   G++P  +TY TI  
Sbjct: 169 LNLFHQMF-ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 257 AYAQNGEADQAEEVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              + G+   A  ++ +ME  + + PN      II   CK+G+  +A      M+E G+ 
Sbjct: 228 GMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+L  +N +I GF         +++L  M E +++PDV+TY+ ++NA+   G   + +E+
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL 347

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           +D+M   GI P+   YS +  G+ ++   + AE +   M   G  PN++ F T+I G+C 
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              +D  +E+  +M E G+  +  T+ TL+ G+        A ++LQ M + G+ P   T
Sbjct: 408 AKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVT 467

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKER 524
              L +     G  K+A  +   ++  ++
Sbjct: 468 CDTLLDGLCDNGKLKDALEMFKVMQKSKK 496



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 220/453 (48%), Gaps = 16/453 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   L+       K   A + F  + + G  P +VT+TTLL  L ++ R +   ++  
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALNLFH 173

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ E    P+ + F  ++N     G + EA+    +M E GL PT  TY T++ G    G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++ LL  M    ++ PN+  Y+ ++ + C +   ++A N+  +M   G+ PD+ TY
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++   +  +G    AE+++ EM    + P+  T   +I+ + KEGK  EA      M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN + ++ +I GF +    D  + +  LM     +P++IT++T+++ +  A  +D 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+  +M + G+  D   Y+ L  G+    +   A +LL  MI SG  P++V   T++ 
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 432 GWCSDGSMDRAIEVFDKMCE-----------HGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           G C +G +  A+E+F  M +           +GV P+++T+  L+ G     +   AEE+
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            + M   G+ P   T+     +    GL K+++
Sbjct: 534 YEEMPHRGIVPDTITY-----SSMIDGLCKQSR 561



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 79/171 (46%), Gaps = 1/171 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++   L++ LI  GK  EA+ ++  +   G  P  +TY++++  L  Q R +    +  
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +      P+ + F  +IN + ++G +++ ++ F +M   G+     TY TLI G+   G
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
               ++ +   M   G     +   N+L   W  E+ +  A  ++ K+  S
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE-LKRAVAMLEKLQMS 680


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 217/425 (51%), Gaps = 35/425 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +++SL + G+  +AQ +F  + E G  P L TY +++       R++    ++ ++ E
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + PD + +NA+INAF + G   EA + + +M   G+ P T TY+++I G+    + + 
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  +  LM+ +G   PNL T+N L+  +C  K I +   ++H+M  +G+  D  TYNT+ 
Sbjct: 379 AEHMFYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY--- 312
             +   G+ + A +++ EM  +G+ P+  TC  ++ G C  GK+K+AL   + M++    
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 313 --GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
               HP    FN                          V PDV TY+ +++     G   
Sbjct: 498 LDASHP----FN-------------------------GVEPDVQTYNILISGLINEGKFL 528

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +E++++M   GI PD   YS +  G  ++   ++A ++  +M    F PNVV FTT+I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+C  G +D  +E+F +M   G+  N  T+ TL+ G+ +      A +I Q M + GV+
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 491 PQKST 495
           P   T
Sbjct: 649 PDTIT 653



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 218/453 (48%), Gaps = 16/453 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   L+       K   A + F  + + G  P +VT+TTLL  L ++ R +       
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ E    P+ + F  ++N     G + EA+    +M E GL PT  TY T++ G    G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++ LL  M    ++ PN+  Y+ ++ + C +   ++A N+  +M   G+ PD+ TY
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++   +  +G    AE+++ EM    + P+  T   +I+ + KEGK  EA      M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN + ++ +I GF +    D  + +  LM     +P++IT++T+++ +  A  +D 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+  +M + G+  D   Y+ L  G+    +   A +LL  MI SG  P++V   T++ 
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 432 GWCSDGSMDRAIEVFDKMCE-----------HGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           G C +G +  A+E+F  M +           +GV P+++T+  L+ G     +   AEE+
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            + M   G+ P   T+     +    GL K+++
Sbjct: 534 YEEMPHRGIVPDTITY-----SSMIDGLCKQSR 561



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 221/449 (49%), Gaps = 2/449 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL +   E    ++A  +F++++     PS+V +  L+  +   +R + + S+  ++E  
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            +  D   FN +I  F     +  A+ TF K+ + GL P   T+ TL+ G  +  +  E+
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEA 168

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +     M  E   +PN+ T+  L+   C E  I EA  ++ +M   G++P  +TY TI  
Sbjct: 169 LDFFHQMF-ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 257 AYAQNGEADQAEEVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              + G+   A  ++ +ME  + + PN      II   CK+G+  +A      M+E G+ 
Sbjct: 228 GMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+L  +N +I GF         +++L  M E +++PDV+TY+ ++NA+   G   + +E+
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL 347

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           +D+M   GI P+   YS +  G+ ++   + AE +   M   G  PN++ F T+I G+C 
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              +D  +E+  +M E G+  +  T+ TL+ G+        A ++LQ M + G+ P   T
Sbjct: 408 AKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVT 467

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKER 524
              L +     G  K+A  +   ++  ++
Sbjct: 468 CDTLLDGLCDNGKLKDALEMFKVMQKSKK 496



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 79/171 (46%), Gaps = 1/171 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++   L++ LI  GK  EA+ ++  +   G  P  +TY++++  L  Q R +    +  
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +      P+ + F  +IN + ++G +++ ++ F +M   G+     TY TLI G+   G
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
               ++ +   M   G     +   N+L   W  E+ +  A  ++ K+  S
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE-LKRAVAMLEKLQMS 680


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 217/425 (51%), Gaps = 35/425 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +++SL + G+  +AQ +F  + E G  P L TY +++       R++    ++ ++ E
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + PD + +NA+INAF + G   EA + + +M   G+ P T TY+++I G+    + + 
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDA 378

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  +  LM+ +G   PNL T+N L+  +C  K I +   ++H+M  +G+  D  TYNT+ 
Sbjct: 379 AEHMFYLMATKG-CSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLI 437

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY--- 312
             +   G+ + A +++ EM  +G+ P+  TC  ++ G C  GK+K+AL   + M++    
Sbjct: 438 HGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKD 497

Query: 313 --GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
               HP    FN                          V PDV TY+ +++     G   
Sbjct: 498 LDASHP----FN-------------------------GVEPDVQTYNILISGLINEGKFL 528

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +E++++M   GI PD   YS +  G  ++   ++A ++  +M    F PNVV FTT+I
Sbjct: 529 EAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLI 588

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+C  G +D  +E+F +M   G+  N  T+ TL+ G+ +      A +I Q M + GV+
Sbjct: 589 NGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVY 648

Query: 491 PQKST 495
           P   T
Sbjct: 649 PDTIT 653



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 223/449 (49%), Gaps = 2/449 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL +   E    ++A  +F++++     PS+V +  L+  +   +R + + S+  ++E  
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            +  D   F  +I  F     +  A+ TF K+ + GL P   T+NTL+ G  +  +  E+
Sbjct: 109 QIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEA 168

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + L   M  E   +PN+ T+  L+   C E  I EA  ++ +M   G++P  +TY TI  
Sbjct: 169 LNLFHQMF-ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 257 AYAQNGEADQAEEVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              + G+   A +++ +ME  + + PN      II   CK+G+  +A      M+E G+ 
Sbjct: 228 GMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+L  +N +I GF         +++L  M E +++PDV+TY+ ++NA+   G   + +E+
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL 347

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           +D+M   GI P+   YS +  G+ ++   + AE +   M   G  PN++ F T+I G+C 
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              +D  +E+  +M E G+  +  T+ TL+ G+        A ++LQ M + G+ P   T
Sbjct: 408 AKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVT 467

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKER 524
              L +     G  K+A  +   ++  ++
Sbjct: 468 CDTLLDGLCDNGKLKDALEMFKVMQKSKK 496



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 220/453 (48%), Gaps = 16/453 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S T L+       K   A + F  + + G  P +VT+ TLL  L ++ R +   ++  
Sbjct: 114 IYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSEALNLFH 173

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ E    P+ + F  ++N     G + EA+    +M E GL PT  TY T++ G    G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKIG 233

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++ LL  M    ++ PN+  Y+ ++ + C +   ++A N+  +M   G+ PD+ TY
Sbjct: 234 DTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++   +  +G    AE+++ EM    + P+  T   +I+ + KEGK  EA      M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEELYDEMLP 353

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN + ++ +I GF +    D  + +  LM     +P++IT++T+++ +  A  +D 
Sbjct: 354 RGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDD 413

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+  +M + G+  D   Y+ L  G+    +   A +LL  MI SG  P++V   T++ 
Sbjct: 414 GMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLD 473

Query: 432 GWCSDGSMDRAIEVFDKMCE-----------HGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           G C +G +  A+E+F  M +           +GV P+++T+  L+ G     +   AEE+
Sbjct: 474 GLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEEL 533

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            + M   G+ P   T+     +    GL K+++
Sbjct: 534 YEEMPHRGIVPDTITY-----SSMIDGLCKQSR 561



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 39/171 (22%), Positives = 79/171 (46%), Gaps = 1/171 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++   L++ LI  GK  EA+ ++  +   G  P  +TY++++  L  Q R +    +  
Sbjct: 511 VQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 570

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +      P+ + F  +IN + ++G +++ ++ F +M   G+     TY TLI G+   G
Sbjct: 571 SMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVG 630

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
               ++ +   M   G     +   N+L   W  E+ +  A  ++ K+  S
Sbjct: 631 NINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEE-LKRAVAMLEKLQMS 680


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 213/385 (55%), Gaps = 5/385 (1%)

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
           I+K F+    ++ ++ E G  P+ + +  +I+   + G +E+A D F++M + GL     
Sbjct: 179 IEKSFD----LLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANER 234

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           TY  LI G    G  ++  ++ + M  +G V PNL TYN ++   C +    +A+ V  +
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDG-VFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M   G+  ++VTYNT+     +  + ++A +V+ +M+ +G+ PN  T   +I G+C  GK
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           + +AL   R +K  G+ P+LV +N+L+ GF    D  G  +++  M+E  + P  +TY+ 
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++ ++ +  M+K  ++   M + G+ PD H YS+L  G+  + +  +A  L  +M+E  
Sbjct: 414 LIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKN 473

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PN VI+ T+I G+C +GS  RA+++  +M E  ++PN+ ++  ++    + R+   AE
Sbjct: 474 CEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533

Query: 479 EILQIMKAFGVHPQKSTFLLLAEAR 503
            +++ M   G+ P  S   L++ A+
Sbjct: 534 RLVEKMIDSGIDPSTSILSLISRAK 558



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 219/445 (49%), Gaps = 8/445 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++NS ++      + + FN +++ G  P    +  LL  +     FN   S  ++  ++ 
Sbjct: 100 IINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNE-NKSK 158

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   F  +I    E+G +E++ D   ++ E G +P    Y TLI G    G+ E++ 
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAK 218

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M + G V  N RTY VL+          + + +  KM   G+ P++ TYN +   
Sbjct: 219 DLFFEMGKLGLV-ANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             ++G    A +V  EM   GV  N  T   +I G C+E K+ EA +    MK  G++PN
Sbjct: 278 LCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPN 337

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
           L+ +N LI GF  +     + + L+L ++ +   ++P ++TY+ +++ +   G      +
Sbjct: 338 LITYNTLIDGFCGV---GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAK 394

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +  +M + GIKP    Y+IL   + R    EKA +L ++M E G  P+V  ++ +I G+C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFC 454

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G M+ A  +F  M E    PN   + T++ GY +    +RA ++L+ M+   + P  +
Sbjct: 455 IKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVA 514

Query: 495 TFLLLAEARRATGLTKEAKRILSKI 519
           ++  + E       +KEA+R++ K+
Sbjct: 515 SYRYMIEVLCKERKSKEAERLVEKM 539



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 165/326 (50%), Gaps = 3/326 (0%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+ T L+N L + G  ++   ++  + E G  P+L TY  ++  L    R      +  +
Sbjct: 234 RTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDE 293

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + E G+  + + +N +I        + EA     +MK  G+ P   TYNTLI G+   GK
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGK 353

Query: 193 PEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +++ L  DL SR   + P+L TYN+LV  +C + + + A  ++ +M   G+KP  VTY
Sbjct: 354 LGKALSLCRDLKSR--GLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +   +A++   ++A ++ + ME  G+ P+  T  ++I G+C +G++ EA R  ++M E
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
               PN VI+N +I G+ +        ++L  M+E  + P+V +Y  ++          +
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKG 397
            + + + M  +GI P     S++++ 
Sbjct: 532 AERLVEKMIDSGIDPSTSILSLISRA 557


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 213/429 (49%), Gaps = 1/429 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A  +FN + + G +P+ VTY+TL+  L    R N    ++ ++  +G+ P +      I 
Sbjct: 439 ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 498

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           A  + G  E+A   F  MK  G  P   TY  LI G  ++G  + ++ L   MSR+G V 
Sbjct: 499 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDG-VF 557

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN  TYN L+      + I  A+ V++ M  +G+  ++VTYN +   Y   G+  +A  V
Sbjct: 558 PNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLV 617

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +  M   G   N  T   II GYC  G    ALR    M++ G  P+   +  LI GF +
Sbjct: 618 MNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCK 677

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           I   +    +   M +  + P+ +TY+ +++ +     +D    + + M ++G +P+   
Sbjct: 678 ISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQT 737

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y++L  G  ++     AEEL   MIE G  PNVV +T +I G C +GS   A+E+F+KM 
Sbjct: 738 YNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMI 797

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E G  PNL T+ +L+    +  +   AE +   ++  G+ P + T++ + EA   +G  +
Sbjct: 798 EQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVE 857

Query: 511 EAKRILSKI 519
            A   L ++
Sbjct: 858 HAFNFLGRM 866



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 201/397 (50%), Gaps = 1/397 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  + T  + +L + G  ++A  +F ++   G +P++ TYT L++ L +         + 
Sbjct: 489 TAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLF 548

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  +G+ P+++ +NA+IN   E+  ++ A      M  +GL     TYN +IKGY I 
Sbjct: 549 HRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCIL 608

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G P++++ +++ M + G+   NL TYN +++ +C+  N T A  ++  M   G KPD  +
Sbjct: 609 GDPKKAMLVMNNMLQRGH-SANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWS 667

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +   + +  + + A  +  EM  +G+ PN  T   +I GYCK+ K+  A      MK
Sbjct: 668 YTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMK 727

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PN+  +N+LI G  +  +  G +E+  +M E  + P+V+TY+ +++     G   
Sbjct: 728 RSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 787

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              E+F+ M + G  P+   YS L +   +E + E+AE L   +   G  P+ + +  +I
Sbjct: 788 LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 847

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +   G ++ A     +M + G  P L T+  L+ G
Sbjct: 848 EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKG 884



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 204/437 (46%), Gaps = 2/437 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M KE C     + + L+N L + G+  EA  +   +I  G  P+  T T  + AL     
Sbjct: 446 MAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGC 505

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +     +   ++  G +P+   + A+I+    SG ++ A+  F +M   G+ P T TYN 
Sbjct: 506 YEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNA 565

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI       + + +  +L+LM R G +  N+ TYN +++ +C   +  +A  VM+ M   
Sbjct: 566 LINILVENRRIKYAFVVLNLMGRNG-LFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQR 624

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G   ++VTYNTI   Y  +G    A  ++  M   G +P+  +   +I G+CK  K++ A
Sbjct: 625 GHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESA 684

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M + G+ PN V +  LI G+ +    D    +L  MK     P+V TY+ +++ 
Sbjct: 685 FGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHG 744

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
            +        +E+   M + GI P+   Y+ +  G  +      A E+   MIE G  PN
Sbjct: 745 LTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPN 804

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           ++ ++++I     +G ++ A  +F ++  HG+ P+  T+  ++  Y  + +   A   L 
Sbjct: 805 LLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLG 864

Query: 483 IMKAFGVHPQKSTFLLL 499
            M   G  P   T+ +L
Sbjct: 865 RMIKAGCQPTLWTYGVL 881



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/462 (24%), Positives = 199/462 (43%), Gaps = 71/462 (15%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK------------------ 169
           S +  + ++G+      ++A++   S  G     MD + +M                   
Sbjct: 336 SFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINAL 395

Query: 170 -----------------ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
                            ES ++P T TY ++I G+      + ++++ + M++EG  +PN
Sbjct: 396 CKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEG-CEPN 454

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
             TY+ L+   C+   + EA++++ +M   G+ P   T      A    G  + A  + V
Sbjct: 455 TVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFV 514

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE-- 330
           +M++ G +PN  T   +ISG C  G +K A+     M   GV PN V +N LI   VE  
Sbjct: 515 DMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENR 574

Query: 331 ----------IMDRDGVDEVLA----LMKEFRVNPD-------------------VITYS 357
                     +M R+G+   +     ++K + +  D                   ++TY+
Sbjct: 575 RIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYN 634

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           TI+  +  +G       I D M   G KPD  +Y+ L  G+ +  + E A  L   M++ 
Sbjct: 635 TIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 694

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  PN V +T +I G+C D  +D A  + + M   G  PN++T+  L+ G ++      A
Sbjct: 695 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 754

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           EE+ ++M   G+ P   T+  + +     G T  A  + +K+
Sbjct: 755 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKM 796



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 115/475 (24%), Positives = 190/475 (40%), Gaps = 60/475 (12%)

Query: 86   GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
            G P++A  + NN+++ GH  +LVTY T++          S   I+  + + G  PD   +
Sbjct: 609  GDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 668

Query: 146  NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
              +I  F +   ME A   F +M + GL P   TY  LI GY    K + +  LL+ M R
Sbjct: 669  TELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKR 728

Query: 206  EGNVKPNLRTYNVLVRAW-----------------------------------CNEKNIT 230
             G  +PN++TYNVL+                                      C   + +
Sbjct: 729  SG-CRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTS 787

Query: 231  EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
             A  + +KM   G  P+++TY+++  A  Q G+ ++AE +  E+E +G+ P+  T   +I
Sbjct: 788  LALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMI 847

Query: 291  SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------------------- 328
              Y   GK++ A  F   M + G  P L  + +LIKG                       
Sbjct: 848  EAYIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCS 907

Query: 329  --VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
               +  D+D V  + A + E      V   + +++  STAG   +  E+   M   G+ P
Sbjct: 908  FGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCP 967

Query: 387  DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
            D  AY+ L    +R +  + A  +   M   G   ++  +  +I   C       A   F
Sbjct: 968  DQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITF 1027

Query: 447  DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
            + M     +P+      L+ G           E L IM+     P    + +LA 
Sbjct: 1028 ENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 1082



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 154/339 (45%), Gaps = 1/339 (0%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           M   M     + +SGL      Y+ L+      G     +     M  EG V+PNL  YN
Sbjct: 331 MARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG-VQPNLLIYN 389

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++ A C + N+ +A  +M K+  S M PD  TY ++   + +  + D A +V  +M   
Sbjct: 390 AVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAKE 449

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G +PN  T   +I+G C  G++ EA    R M  +G+ P        I    ++   +  
Sbjct: 450 GCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDA 509

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
             +   MK     P+V TY+ +++    +G +     +F  M + G+ P+   Y+ L   
Sbjct: 510 WRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINI 569

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
            V  +  + A  +L  M  +G   N+V +  +I G+C  G   +A+ V + M + G S N
Sbjct: 570 LVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSAN 629

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           L T+ T++ GY ++     A  IL +M+  G  P + ++
Sbjct: 630 LVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSY 668



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/374 (26%), Positives = 165/374 (44%), Gaps = 37/374 (9%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  + C   V + T L++ L   G  + A  +F+ +   G  P+ VTY  L+  L   +R
Sbjct: 516 MKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRR 575

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +++ +  NG+  + + +N +I  +   G+ ++AM     M + G +    TYNT
Sbjct: 576 IKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNT 635

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKP------------------------------- 211
           +IKGY  +G    ++++LDLM R+G  KP                               
Sbjct: 636 IIKGYCDSGNTTSALRILDLM-RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDD 694

Query: 212 ----NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
               N  TY  L+  +C ++ +  A +++  M  SG +P+V TYN +     +      A
Sbjct: 695 GLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGA 754

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
           EE+   M   G+ PN  T   +I G CK G    AL     M E G  PNL+ ++ LI+ 
Sbjct: 755 EELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRA 814

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             +    +  + + A ++   + PD ITY  ++ A+  +G ++        M KAG +P 
Sbjct: 815 LGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPT 874

Query: 388 AHAYSILAKGYVRE 401
              Y +L KG   E
Sbjct: 875 LWTYGVLIKGLKNE 888



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 125/278 (44%)

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L+++  +++ +    + +  ++ SG++  +  Y+ +    ++ G      +    M   G
Sbjct: 321 LIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLSEG 380

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           VQPN      +I+  CK+G + +A    + + E  + P+   +  +I G     D D   
Sbjct: 381 VQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSAL 440

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           +V   M +    P+ +TYST++N    +G +++  ++  +M   GI P AH  +      
Sbjct: 441 QVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIAL 500

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
                 E A  L + M   G  PNV  +T +ISG C  G +  AI +F +M   GV PN 
Sbjct: 501 CDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNT 560

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            T+  L+    E R+   A  +L +M   G+     T+
Sbjct: 561 VTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTY 598



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/358 (22%), Positives = 150/358 (41%), Gaps = 26/358 (7%)

Query: 64   MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
            M +  CR  V++   L++ L ++     A+ +   +IE G  P++VTYT ++  L     
Sbjct: 726  MKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGS 785

Query: 123  FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
             +    + +++ E G  P+ + ++++I A  + G +EEA + F +++  GL P   TY  
Sbjct: 786  TSLALEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVK 845

Query: 183  LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE---------------K 227
            +I+ Y ++GK E +   L  M + G  +P L TY VL++   NE                
Sbjct: 846  MIEAYIMSGKVEHAFNFLGRMIKAG-CQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVP 904

Query: 228  NITEAWNVMHKMAASGMKP---------DVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
            N +  +    + A S M            V   N + +  +  G   +A E++  M   G
Sbjct: 905  NCSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQG 964

Query: 279  VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
            + P+      ++    +   +  A+   + M   G   +L  +  LI    ++  R    
Sbjct: 965  LCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEAR 1024

Query: 339  EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
                 M     NPD +  + +++     G+ D C E    M      P  H Y+ILA+
Sbjct: 1025 ITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAR 1082


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/404 (28%), Positives = 218/404 (53%), Gaps = 1/404 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   ++N L + GK ++A+    ++   G KP++VTY T++       R  +  +I+
Sbjct: 220 SVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAIL 279

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + ++   ++PDS  + ++I+   + G +EEA   F +M + GL P+   YNTLI G+   
Sbjct: 280 TTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNK 339

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  + +    D M ++G + P + TYN L+ A   E+   EA  ++ ++   G+ PD +T
Sbjct: 340 GNLDMASAYKDEMLKKG-ISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAIT 398

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +   Y +   A +A  +  EM  +G++P  +T   ++    K+ ++KEA    + + 
Sbjct: 399 YNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKIT 458

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             GV P+ ++FN LI G     +  G  E+L  M   +V PD +T++TIM      G ++
Sbjct: 459 SEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVE 518

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +E+FD+M + GIKPD  +++ L  GY R  + + A  +   M+++GF+P V+ +  ++
Sbjct: 519 EARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALV 578

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
            G C +   D A E+  +M   G++P+  T+ TL+ G ++   P
Sbjct: 579 QGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIP 622



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 200/409 (48%), Gaps = 36/409 (8%)

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           SI F+ +I +  +    +EA + F+ MKE G+ PT  T N+L+  +    + E +  L  
Sbjct: 151 SIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYA 210

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M R   +K ++ T+N+++   C E  + +A + +  M  SG+KP++VTYNTI   Y  +
Sbjct: 211 EMFRL-RIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           G  + A+ ++  M+   ++P+  T G +ISG CK+G+++EA +    M + G+ P+ VI+
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 322 NLLIKGFV------------EIMDRDGV--------------------DEVLALMKEFR- 348
           N LI GF             + M + G+                    DE   ++KE + 
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 349 --VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             ++PD ITY+ ++N +       K   + D+M  +GIKP    Y+ L     ++   ++
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A++L   +   G  P+ ++F  +I G CS+ ++  A E+   M    V P+  TF T+M 
Sbjct: 450 ADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           G+    +   A E+   MK  G+ P   +F  L       G  K+A R+
Sbjct: 510 GHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRV 558



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 215/443 (48%), Gaps = 1/443 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L++  ++  + + A  ++  +     K S+ T+  ++  L  + +       +
Sbjct: 185 TIETCNSLLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFV 244

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +E +G+ P+ + +N +++ +  SG +E A      MK   + P + TY +LI G    
Sbjct: 245 GHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQ 304

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ EE+ K+ + M ++G ++P+   YN L+  +CN+ N+  A     +M   G+ P + T
Sbjct: 305 GRLEEASKIFEEMVQKG-LRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMST 363

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++  A       D+AE +I E++  G+ P+  T  I+I+GYC+    K+A      M 
Sbjct: 364 YNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEML 423

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P    +  L+    +       D++   +    V PD I ++ +++   +   + 
Sbjct: 424 ASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVK 483

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              E+  DM +  + PD   ++ + +G+ RE + E+A EL   M   G  P+ + F T+I
Sbjct: 484 GAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLI 543

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           SG+   G +  A  V ++M + G +P + T+  L+ G  + ++   AEE+L+ M + G+ 
Sbjct: 544 SGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMT 603

Query: 491 PQKSTFLLLAEARRATGLTKEAK 513
           P  +T+  L E      +  E K
Sbjct: 604 PDDTTYFTLIEGIAKVNIPDENK 626



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 45/193 (23%), Positives = 93/193 (48%)

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           I+E   F    ++     + ++F+ LIK   ++   D   E    MKE  V P + T ++
Sbjct: 132 IREIFEFLAASRDRLGFKSSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNS 191

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++ +      +    ++ +M +  IK   + ++I+     +E + +KA++ +  M  SG
Sbjct: 192 LLSLFLKLNRTEAAWVLYAEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSG 251

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PN+V + TI+ G+CS G ++ A  +   M    + P+  T+ +L+ G  +  +   A 
Sbjct: 252 VKPNIVTYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEAS 311

Query: 479 EILQIMKAFGVHP 491
           +I + M   G+ P
Sbjct: 312 KIFEEMVQKGLRP 324


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 231/457 (50%), Gaps = 4/457 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L+      GK ++A  +   L + G  P ++TY  L++      +   I + +  ++ 
Sbjct: 96  TSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC---KSGEIDNALQVLDR 152

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + PD + +N ++    +SG +++AM+   +  +    P   TY  LI+         +
Sbjct: 153 MNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQ 212

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++KLLD M  +G+ KP++ TYNVL+   C E  + EA   ++ M + G +P+V+T+N I 
Sbjct: 213 AMKLLDEMRNKGS-KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 271

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            +    G    AE+++ +M   G  P+  T  I+I+  C++G +  A+     M  +G  
Sbjct: 272 RSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCT 331

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN + +N L+ GF +    D   E L +M      PD++TY+T++ A    G +D   EI
Sbjct: 332 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 391

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            + +   G  P    Y+ +  G  +  + E+A +LL  M   G  P+++ +++++SG   
Sbjct: 392 LNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 451

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G +D AI+ F  +   G+ PN  T+ ++M G  ++RQ  RA + L  M +    P ++T
Sbjct: 452 EGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEAT 511

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
           + +L E     GL KEA  +L+++ ++    +  AE+
Sbjct: 512 YTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQ 548



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 107/374 (28%), Positives = 204/374 (54%), Gaps = 9/374 (2%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD I   ++I  F   G  ++A      +++SG  P   TYN LI GY  +G+ + ++++
Sbjct: 90  PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 149

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           LD M    NV P++ TYN ++R  C+   + +A  V+ +       PDV+TY  +  A  
Sbjct: 150 LDRM----NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATC 205

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +     QA +++ EM + G +P+  T  ++I+G CKEG++ EA++F   M  YG  PN++
Sbjct: 206 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 265

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
             N++++           +++L+ M     +P V+T++ ++N     G + +  +I + M
Sbjct: 266 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 325

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G  P++ +Y+ L  G+ +E++ ++A E L  M+  G +P++V + T+++  C DG +
Sbjct: 326 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 385

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D A+E+ +++   G SP L T+ T++ G S+  +  RA ++L  M+  G+ P   T+   
Sbjct: 386 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITY--- 442

Query: 500 AEARRATGLTKEAK 513
             +   +GL++E K
Sbjct: 443 --SSLVSGLSREGK 454



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 171/332 (51%), Gaps = 1/332 (0%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           NK S   V +   L+N + + G+  EA    NN+   G +P+++T+  +L ++    R+ 
Sbjct: 222 NKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 281

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
               ++S +   G  P  + FN +IN     G +  A+D   KM   G TP + +YN L+
Sbjct: 282 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 341

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G+    K + +++ LD+M   G   P++ TYN L+ A C +  +  A  +++++++ G 
Sbjct: 342 HGFCKEKKMDRAIEYLDIMVSRG-CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 400

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P ++TYNT+    ++ G+ ++A +++ EM   G++P+  T   ++SG  +EGK+ EA++
Sbjct: 401 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 460

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
           F   ++  G+ PN + +N ++ G  +    D   + LA M   R  P   TY+ ++   +
Sbjct: 461 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIA 520

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             G   +  ++ +++   G+   + A  +  K
Sbjct: 521 YEGLAKEALDLLNELCSRGLVKKSSAEQVAVK 552



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 167/360 (46%), Gaps = 9/360 (2%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           + KE    V + T L+ +  +     +A  + + +   G KP +VTY  L+  +  + R 
Sbjct: 186 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 245

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +     ++ +   G  P+ I  N ++ +   +G   +A      M   G +P+  T+N L
Sbjct: 246 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 305

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I      G    ++ +L+ M   G   PN  +YN L+  +C EK +  A   +  M + G
Sbjct: 306 INFLCRQGLLGRAIDILEKMPMHG-CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 364

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             PD+VTYNT+ TA  ++G+ D A E++ ++   G  P   T   +I G  K GK + A+
Sbjct: 365 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 424

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTI 359
           +    M+  G+ P+++ ++ L+ G    + R+G VDE +    +     + P+ ITY++I
Sbjct: 425 KLLDEMRRKGLKPDIITYSSLVSG----LSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 480

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           M     +   D+  +    M     KP    Y+IL +G   E   ++A +LL  +   G 
Sbjct: 481 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 159/338 (47%), Gaps = 38/338 (11%)

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +R       + + +  +  M   G  PD++   ++   + + G+  +A  V+  +E +G 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------VE 330
            P+  T  ++ISGYCK G+I  AL+    M    V P++V +N +++           +E
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 180

Query: 331 IMDR-----------------------DGVDEVLALMKEFR---VNPDVITYSTIMNAWS 364
           ++DR                        GV + + L+ E R     PDV+TY+ ++N   
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G +D+  +  ++M   G +P+   ++I+ +          AE+LL  M+  G  P+VV
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            F  +I+  C  G + RAI++ +KM  HG +PN  ++  L+ G+ + ++  RA E L IM
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            + G +P   T+  L  A    G    A  IL+++ +K
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 398



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 3/125 (2%)

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           VR  E E   + L +M+  G  P+++  T++I G+C  G   +A  V + + + G  P++
Sbjct: 68  VRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 127

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+  L+ GY ++ +    +  LQ++    V P   T+  +      +G  K+A  +L +
Sbjct: 128 ITYNVLISGYCKSGE---IDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 184

Query: 519 IKNKE 523
              KE
Sbjct: 185 QLQKE 189


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 231/457 (50%), Gaps = 4/457 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L+      GK ++A  +   L + G  P ++TY  L++      +   I + +  ++ 
Sbjct: 153 TSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYC---KSGEIDNALQVLDR 209

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + PD + +N ++    +SG +++AM+   +  +    P   TY  LI+         +
Sbjct: 210 MNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATCKESGVGQ 269

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++KLLD M  +G+ KP++ TYNVL+   C E  + EA   ++ M + G +P+V+T+N I 
Sbjct: 270 AMKLLDEMRNKGS-KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIIL 328

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            +    G    AE+++ +M   G  P+  T  I+I+  C++G +  A+     M  +G  
Sbjct: 329 RSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCT 388

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN + +N L+ GF +    D   E L +M      PD++TY+T++ A    G +D   EI
Sbjct: 389 PNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEI 448

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            + +   G  P    Y+ +  G  +  + E+A +LL  M   G  P+++ +++++SG   
Sbjct: 449 LNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSR 508

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G +D AI+ F  +   G+ PN  T+ ++M G  ++RQ  RA + L  M +    P ++T
Sbjct: 509 EGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEAT 568

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
           + +L E     GL KEA  +L+++ ++    +  AE+
Sbjct: 569 YTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQ 605



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 108/374 (28%), Positives = 204/374 (54%), Gaps = 9/374 (2%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD I   ++I  F   G  ++A      +++SG  P   TYN LI GY  +G+ + ++++
Sbjct: 147 PDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDVITYNVLISGYCKSGEIDNALQV 206

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           LD M    NV P++ TYN ++R  C+   + +A  V+ +       PDV+TY  +  A  
Sbjct: 207 LDRM----NVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEATC 262

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +     QA +++ EM + G +P+  T  ++I+G CKEG++ EA++F   M  YG  PN++
Sbjct: 263 KESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVI 322

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
             N++++           +++L+ M     +P V+T++ ++N     G + +  +I + M
Sbjct: 323 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 382

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G  P++ +Y+ L  G+ +E++ ++A E L  M+  G +P++V + T+++  C DG +
Sbjct: 383 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 442

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D A+E+ +++   G SP L T+ T++ G S+  +  RA ++L  M+  G+ P   T+  L
Sbjct: 443 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSL 502

Query: 500 AEARRATGLTKEAK 513
                 +GL++E K
Sbjct: 503 -----VSGLSREGK 511



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 86/332 (25%), Positives = 171/332 (51%), Gaps = 1/332 (0%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           NK S   V +   L+N + + G+  EA    NN+   G +P+++T+  +L ++    R+ 
Sbjct: 279 NKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 338

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
               ++S +   G  P  + FN +IN     G +  A+D   KM   G TP + +YN L+
Sbjct: 339 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 398

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G+    K + +++ LD+M   G   P++ TYN L+ A C +  +  A  +++++++ G 
Sbjct: 399 HGFCKEKKMDRAIEYLDIMVSRG-CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 457

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P ++TYNT+    ++ G+ ++A +++ EM   G++P+  T   ++SG  +EGK+ EA++
Sbjct: 458 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 517

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
           F   ++  G+ PN + +N ++ G  +    D   + LA M   R  P   TY+ ++   +
Sbjct: 518 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIA 577

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             G   +  ++ +++   G+   + A  +  K
Sbjct: 578 YEGLAKEALDLLNELCSRGLVKKSSAEQVAVK 609



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 93/360 (25%), Positives = 167/360 (46%), Gaps = 9/360 (2%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           + KE    V + T L+ +  +     +A  + + +   G KP +VTY  L+  +  + R 
Sbjct: 243 LQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRL 302

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +     ++ +   G  P+ I  N ++ +   +G   +A      M   G +P+  T+N L
Sbjct: 303 DEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNIL 362

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I      G    ++ +L+ M   G   PN  +YN L+  +C EK +  A   +  M + G
Sbjct: 363 INFLCRQGLLGRAIDILEKMPMHG-CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRG 421

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             PD+VTYNT+ TA  ++G+ D A E++ ++   G  P   T   +I G  K GK + A+
Sbjct: 422 CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAI 481

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTI 359
           +    M+  G+ P+++ ++ L+ G    + R+G VDE +    +     + P+ ITY++I
Sbjct: 482 KLLDEMRRKGLKPDIITYSSLVSG----LSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 537

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           M     +   D+  +    M     KP    Y+IL +G   E   ++A +LL  +   G 
Sbjct: 538 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 159/338 (47%), Gaps = 38/338 (11%)

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +R       + + +  +  M   G  PD++   ++   + + G+  +A  V+  +E +G 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------VE 330
            P+  T  ++ISGYCK G+I  AL+    M    V P++V +N +++           +E
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMN---VAPDVVTYNTILRTLCDSGKLKQAME 237

Query: 331 IMDR-----------------------DGVDEVLALMKEFR---VNPDVITYSTIMNAWS 364
           ++DR                        GV + + L+ E R     PDV+TY+ ++N   
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G +D+  +  ++M   G +P+   ++I+ +          AE+LL  M+  G  P+VV
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            F  +I+  C  G + RAI++ +KM  HG +PN  ++  L+ G+ + ++  RA E L IM
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            + G +P   T+  L  A    G    A  IL+++ +K
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSK 455



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/125 (25%), Positives = 61/125 (48%), Gaps = 3/125 (2%)

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           VR  E E   + L +M+  G  P+++  T++I G+C  G   +A  V + + + G  P++
Sbjct: 125 VRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGAVPDV 184

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+  L+ GY ++ +    +  LQ++    V P   T+  +      +G  K+A  +L +
Sbjct: 185 ITYNVLISGYCKSGE---IDNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDR 241

Query: 519 IKNKE 523
              KE
Sbjct: 242 QLQKE 246


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 218/425 (51%), Gaps = 7/425 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L+N L + GK  +A   F++    G +P++ TYTT++  L       +   +  ++
Sbjct: 167 TFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKM 226

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           EE G  P+ + +N +I++  +   + EA+D F  MK   ++P   TYN+LI+G     + 
Sbjct: 227 EEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRW 286

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+  LL+ M+   N+ PN+ T+NVLV A C E  ++EA  V   M   G++PDVVTY++
Sbjct: 287 KEASALLNEMTSL-NIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSS 345

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y+   E  +A ++   M   G +P+  +  I+I GYCK  +I EA +    M   G
Sbjct: 346 LMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQG 405

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMD 370
           + P+ V +N LI G  ++     + E   L K    N   PD+ TYS +++ +   G++ 
Sbjct: 406 LTPDNVNYNTLIHGLCQL---GRLREAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLG 462

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +F  M    +KPD   Y+IL     +    + A +L   +   G  PNV I+TTII
Sbjct: 463 KAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTII 522

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +  C +G +D A+E F  M   G  P+  ++  ++ G+ + +   RA +++  M+  G  
Sbjct: 523 NNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRGFV 582

Query: 491 PQKST 495
            +  T
Sbjct: 583 AEAGT 587



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 222/431 (51%), Gaps = 2/431 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           +A A FN+++     P ++ +T LL+A+  + + + ++ S+  Q+E  G+ PD    + +
Sbjct: 77  DALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSIL 136

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           I+ FS    ++ A   F KM + GL P   T+NTLI G    GK  ++V+  D     G 
Sbjct: 137 IDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASG- 195

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            +P + TY  ++   C     T A  +  KM  +G +P+VVTYN +  +  ++   ++A 
Sbjct: 196 CQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEAL 255

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           ++   M+   + P+  T   +I G C   + KEA      M    + PN+  FN+L+   
Sbjct: 256 DIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAI 315

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +         V   M E  V PDV+TYS++M  +S    + + +++FD M   G KPDA
Sbjct: 316 CKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDA 375

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
            +Y+IL KGY + +  ++A++L   MI  G  P+ V + T+I G C  G +  A ++F  
Sbjct: 376 FSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKN 435

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M  +G  P+L T+  L+ G+ +     +A  + ++M++  + P  + + +L +A    G 
Sbjct: 436 MHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGN 495

Query: 509 TKEAKRILSKI 519
            K+A+++ S++
Sbjct: 496 LKDARKLFSEL 506



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 191/384 (49%), Gaps = 36/384 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV + T ++N L + G+   A  +F  + E G +P++VTY  L+ +L   K  N    I 
Sbjct: 199 TVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIF 258

Query: 131 SQVEENGMDPD----------------------------------SIF-FNAVINAFSES 155
           S ++   + PD                                  +IF FN +++A  + 
Sbjct: 259 SYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKE 318

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
           G + EA   F  M E G+ P   TY++L+ GY +  +  E+ KL D M  +G  KP+  +
Sbjct: 319 GKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKG-CKPDAFS 377

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           YN+L++ +C  K I EA  + ++M   G+ PD V YNT+     Q G   +A+++   M 
Sbjct: 378 YNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMH 437

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
            NG  P+  T  +++ G+CKEG + +A R  R M+   + P++ ++N+LI    +  +  
Sbjct: 438 SNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLK 497

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
              ++ + +    + P+V  Y+TI+N     G +D+  E F +M   G  PD  +Y+++ 
Sbjct: 498 DARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVII 557

Query: 396 KGYVREQEPEKAEELLMTMIESGF 419
           +G+++ ++  +A +L+  M + GF
Sbjct: 558 RGFLQYKDESRAAQLIGEMRDRGF 581



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 179/395 (45%), Gaps = 35/395 (8%)

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
           N+++A+ +F  M      P    +  L+      G+   +V  L        + P++ T 
Sbjct: 74  NIDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTL 133

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           ++L+  + + + +  A++V  KM   G++PD VT+NT+     + G+  QA E   + E 
Sbjct: 134 SILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEA 193

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
           +G QP   T   II+G CK G+   A    + M+E G  PN+V +N+LI    +    + 
Sbjct: 194 SGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNE 253

Query: 337 VDEVLALMKEFRVNPDVITY----------------STIMNAWSTAGFMDK--------- 371
             ++ + MK  R++PD+ TY                S ++N  ++   M           
Sbjct: 254 ALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVD 313

Query: 372 --CKE--------IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
             CKE        +F  M + G++PD   YS L  GY    E  +A +L   MI  G  P
Sbjct: 314 AICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKP 373

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +   +  +I G+C    +D A ++F++M   G++P+   + TL+ G  +  +   A+++ 
Sbjct: 374 DAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLF 433

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           + M + G  P   T+ +L +     G   +A R+ 
Sbjct: 434 KNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLF 468



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 87/306 (28%), Positives = 155/306 (50%), Gaps = 13/306 (4%)

Query: 53  DSQPQTHCSFCMNKESCRTVRSMTKL------------MNSLIERGKPQEAQAIFNNLIE 100
           +S  Q  C+F   KE+   +  MT L            ++++ + GK  EAQ +F  + E
Sbjct: 274 NSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKVSEAQGVFKTMTE 333

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
            G +P +VTY++L+   +++        +   +   G  PD+  +N +I  + ++  ++E
Sbjct: 334 MGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNILIKGYCKAKRIDE 393

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A   F +M   GLTP    YNTLI G    G+  E+  L   M   GN+ P+L TY++L+
Sbjct: 394 AKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGNL-PDLFTYSMLL 452

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
             +C E  + +A+ +   M ++ +KPD+  YN +  A  + G    A ++  E+   G+ 
Sbjct: 453 DGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLL 512

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           PN +    II+  CKEG + EAL   R M+  G  P+   +N++I+GF++  D     ++
Sbjct: 513 PNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQL 572

Query: 341 LALMKE 346
           +  M++
Sbjct: 573 IGEMRD 578



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/174 (27%), Positives = 80/174 (45%), Gaps = 1/174 (0%)

Query: 351 PDVITYSTIMNAWSTAG-FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
           P +I ++ +++A    G +      +   M  AG+ PD +  SIL   +   Q  + A  
Sbjct: 92  PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFS 151

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +   MI+ G  P+ V F T+I+G C  G   +A+E FD     G  P + T+ T++ G  
Sbjct: 152 VFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLC 211

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           +  +   A  + + M+  G  P   T+ +L ++     L  EA  I S +K K 
Sbjct: 212 KIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYMKAKR 265


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 237/486 (48%), Gaps = 37/486 (7%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
            T+++   +++GK  EA  +   ++  G   ++V  TTL+     Q   +S   +  ++ 
Sbjct: 297 FTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMN 356

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           ENG+ P+++ +  +I    ++GNM++A + + +MK   ++PT    N+LI+GY  A  PE
Sbjct: 357 ENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPE 416

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           E+ KL D     G    N+ TYN L+   C E  ++EA ++  KM   G++P VV+YN +
Sbjct: 417 EASKLFDEAVACG--IANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNM 474

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPN-------------------------------- 282
              + Q G+ D A  V VEM   G++PN                                
Sbjct: 475 ILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENI 534

Query: 283 ---GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
                TC III+G CK G+  E+    + + + G  P  + +N +I GFV+    +    
Sbjct: 535 APSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALA 594

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           V   M +  V+P+V TY+ ++N +  +  MD   ++ D+M   GI+ D   Y  L  G+ 
Sbjct: 595 VYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFC 654

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           R+ +   A +LL  + E G  PN V+++++ISG+    +M+ A+ +  +M   G+  +L+
Sbjct: 655 RKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQ 714

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + TL+ G  +  +   A E+   M A G+ P   T+ +L       G  + A++IL  +
Sbjct: 715 IYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDM 774

Query: 520 KNKERT 525
             K  T
Sbjct: 775 DRKCMT 780



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 215/443 (48%), Gaps = 2/443 (0%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           NK+   TV ++  L+   ++   P+EA  +F+  +  G   ++ TY +LL+ L  + + +
Sbjct: 392 NKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGI-ANVFTYNSLLSWLCKEGKMS 450

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
              SI  ++   G+ P  + +N +I    + G+M+ A   F +M E GL P   TY+ L+
Sbjct: 451 EACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLM 510

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            GY   G  E +  L D M  E N+ P+  T N+++   C     +E+ + + K+   G 
Sbjct: 511 DGYFKKGDTEYAFGLYDRMRGE-NIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGF 569

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P  +TYN I   + + G  + A  V  EM   GV PN  T   +I+G+CK   +  AL+
Sbjct: 570 IPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALK 629

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               MK  G+  ++ ++  LI GF    D     ++L+ ++E  ++P+ + YS++++ + 
Sbjct: 630 VMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGLSPNKVVYSSMISGFR 689

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
               M+    +   M   GI  D   Y+ L  G ++E +   A EL   M+  G  P+++
Sbjct: 690 KLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASELYAEMLAKGIMPDLI 749

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            ++ +I G C+ G ++ A ++ + M    ++P +  + TL+ G+ +      A  +   M
Sbjct: 750 TYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEM 809

Query: 485 KAFGVHPQKSTFLLLAEARRATG 507
              G+ P  +T+ +L   +   G
Sbjct: 810 LDKGLVPDDTTYDILVNGKVKDG 832



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 217/455 (47%), Gaps = 5/455 (1%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           K  C T+  M +   + +  GK +EA+  F      G +     Y+ ++ A+  +    +
Sbjct: 221 KGDCATISVMIR---ASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVA 277

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              ++ ++ + G  P  + F  VI    + G M EA+    +M   G         TL+K
Sbjct: 278 ALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMK 337

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           GY   G  + +++L D M+  G + PN  TY V++   C   N+ +A+ + ++M    + 
Sbjct: 338 GYCKQGDLDSALELFDKMNENG-ICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKDIS 396

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P V   N++   Y +    ++A ++  E    G+  N  T   ++S  CKEGK+ EA   
Sbjct: 397 PTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NVFTYNSLLSWLCKEGKMSEACSI 455

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              M   GV P++V +N +I G  +  D D  + V   M E  + P++ITYS +M+ +  
Sbjct: 456 WEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSVLMDGYFK 515

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G  +    ++D M    I P     +I+  G  +     ++++ L  +++ GF P  + 
Sbjct: 516 KGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKLVQEGFIPTCMT 575

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +  II G+  +GS++ A+ V+ +MC+ GVSPN+ T+  L+ G+ ++     A +++  MK
Sbjct: 576 YNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNLINGFCKSNNMDLALKVMDEMK 635

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
             G+    + +  L +     G    A ++LS+++
Sbjct: 636 NKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQ 670



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 196/403 (48%), Gaps = 36/403 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L + GK  EA +I+  ++  G +PS+V+Y  ++     Q   +S + +  
Sbjct: 433 VFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFV 492

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E G+ P+ I ++ +++ + + G+ E A   + +M+   + P+  T N +I G   AG
Sbjct: 493 EMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAG 552

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  ES   L  + +EG + P   TYN ++  +  E ++  A  V  +M   G+ P+V TY
Sbjct: 553 RTSESQDRLKKLVQEGFI-PTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTY 611

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +   + ++   D A +V+ EM++ G++ +      +I G+C++G +  A +    ++E
Sbjct: 612 TNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQE 671

Query: 312 YGVHPNLVIFNLLIKGFVEI------------MDRDGV---------------------- 337
            G+ PN V+++ +I GF ++            M  +G+                      
Sbjct: 672 VGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLF 731

Query: 338 -DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             E+ A M    + PD+ITYS +++     G ++  ++I +DM +  + P    Y+ L  
Sbjct: 732 ASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLIT 791

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
           G+ +E   ++A  L   M++ G  P+   +  +++G   DG++
Sbjct: 792 GHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 183/416 (43%), Gaps = 35/416 (8%)

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            + DS  FN ++N++ ++  + +A+D F  + E  + P  +  N  +          E+ 
Sbjct: 150 FESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREAR 209

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            + + M+ +G VK +  T +V++RA   E  + EA     +    G++ D   Y+ +  A
Sbjct: 210 DVYNKMASKG-VKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEA 268

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +  ++  A  ++ EM   G  P+      +I    K+GK+ EA++    M   G   N
Sbjct: 269 VCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMN 328

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V+   L+KG+ +  D D   E+   M E  + P+ +TY+ I+      G MDK  EI++
Sbjct: 329 VVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYN 388

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL-----------------LMT------- 413
            M    I P     + L +GY++ + PE+A +L                 L++       
Sbjct: 389 QMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNSLLSWLCKEGK 448

Query: 414 ----------MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
                     M+  G  P+VV +  +I G C  G MD A  VF +M E G+ PNL T+  
Sbjct: 449 MSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKGLKPNLITYSV 508

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           LM GY +      A  +   M+   + P   T  ++       G T E++  L K+
Sbjct: 509 LMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRTSESQDRLKKL 564



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 132/296 (44%), Gaps = 21/296 (7%)

Query: 231 EAWNVMHKMAAS--GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           +A N++++ A+   G  P VV    I ++   + E+D                  R    
Sbjct: 117 KARNLLNRFASDDWGPVPSVVVARLIESSRRLDFESDS-----------------RVFNY 159

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI-MDRDGVDEVLALMKEF 347
           +++ Y K  +I +A+    ++ E  + P L + N+ +   V+  M R+  D V   M   
Sbjct: 160 LLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSELVKNNMIREARD-VYNKMASK 218

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            V  D  T S ++ A    G +++ +  F +    G++ DA AYSI+ +   ++ +   A
Sbjct: 219 GVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELDARAYSIVIEAVCKKPDSVAA 278

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             LL  M + G+ P+ VIFT +I      G M  A++V  +M   G   N+    TLM G
Sbjct: 279 LGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKGEMLSCGKPMNVVVATTLMKG 338

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           Y +      A E+   M   G+ P   T+ ++ E     G   +A  I +++KNK+
Sbjct: 339 YCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNGNMDKAYEIYNQMKNKD 394


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 226/447 (50%), Gaps = 16/447 (3%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+ IF  ++E G  P++ TY  L+                 ++E NG  P+ + +N +I+
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIID 246

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           A+ +   + EA      M   GL P   +YN +I G    G+ +E+ ++L+ MS+   V 
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV- 305

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P+  T+N L+  +CN  N  +A  +  +M  +G+ P+VVTY T+  +  + G  ++A E 
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + +M   G+ PNGRT   +I G+ ++G +K+A +  + M E G  P ++ +N LI G   
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           +   +    +L  M E    PDV++YSTI++ +     ++K  ++  +M   GI PD   
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YS L +G  +++   +  +L   M+  G  P+ V +T++I+ +C +G +D+A+ + D+M 
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-------------- 496
           + G SP++ T+  L+ G+++  +   A+ +L  +      P + T+              
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKS 605

Query: 497 -LLLAEARRATGLTKEAKRILSKIKNK 522
            L L +     GL  EA R+L  +  K
Sbjct: 606 ALALMKGFCMKGLMNEADRVLESMLQK 632



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 247/485 (50%), Gaps = 26/485 (5%)

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESG-NMEEAMDTFWKMKESGLTPTTSTYNT 182
           N   SI++  +  G  P  + +NA+++A   +  +++ A   F +M ESG++P   TYN 
Sbjct: 149 NKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNI 208

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI+G+  AG  E  +     M R G + PN+ TYN ++ A+C  + I EA+ ++  MA  
Sbjct: 209 LIRGFCTAGNLEMGLXFFGEMERNGCL-PNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P++++YN +     + G+  +  E++ EM      P+  T   +I+GYC  G   +A
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L     M + G+ PN+V +  LI    +  + +   E L  M++  ++P+  TY+T+++ 
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDG 387

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +S  GF+ +  +I  +M + G  P    Y+ L  G+      E A  LL  MIE GF P+
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPD 447

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           VV ++TIISG+C +  +++A ++  +M   G+SP++ T+ +L+ G  + R+     ++ Q
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ 507

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
            M + G+ P + T+  L  A    G   +A R+  ++  K  + ++     +    L   
Sbjct: 508 EMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDI-----VTYNVLING 562

Query: 543 YHKEATTASYPNLL-------QIPNVVSSD---------QKGSAAALKKG---RMLLRDA 583
           ++K++ T     LL        +PN ++ +         +  SA AL KG   + L+ +A
Sbjct: 563 FNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEA 622

Query: 584 DSSLE 588
           D  LE
Sbjct: 623 DRVLE 627



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 228/480 (47%), Gaps = 17/480 (3%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C   V +   ++++  +  K  EA  +   +   G  P+L++Y  ++  L  + +
Sbjct: 229 MERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 I+ ++ +    PD + FN +IN +   GN  +A+    +M ++GL+P   TY T
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI     AG    +++ LD M R+  + PN RTY  L+  +  +  + +A+ +M +M  +
Sbjct: 349 LINSMCKAGNLNRAMEFLDQM-RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVEN 407

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P ++TYN +   +   G  + A  ++ EM   G  P+  +   IISG+C+  ++++A
Sbjct: 408 GFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKA 467

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
            +    M   G+ P++  ++ LI+G  +      V ++   M    + PD +TY++++NA
Sbjct: 468 FQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINA 527

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +   G +DK   + D+M + G  PD   Y++L  G+ ++   ++A+ LL+ ++     PN
Sbjct: 528 YCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPN 587

Query: 423 VVIFTTIIS---------------GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            + + T+I                G+C  G M+ A  V + M + G   N + +  ++ G
Sbjct: 588 EITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHG 647

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNE 527
           +S+     +A  + + M   G  P   T + LA++    G   E  ++L       R  E
Sbjct: 648 HSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITE 707



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 190/402 (47%), Gaps = 20/402 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+NS+ + G    A    + + + G  P+  TYTTL+   + Q      + IM 
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ ENG  P  I +NA+IN     G ME+A     +M E G  P   +Y+T+I G+    
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E++ +L   M  +G + P++ TY+ L++  C ++ + E  ++  +M + G+ PD VTY
Sbjct: 463 ELEKAFQLKVEMVAKG-ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++  AY   G+ D+A  +  EM   G  P+  T  ++I+G+ K+ + KEA R    +  
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581

Query: 312 YGVHPNLVIFNLLI---------------KGFVEIMDRDGVDEVL--ALMKEFRVNPDVI 354
               PN + +N LI               KGF      +  D VL   L K +++N +V 
Sbjct: 582 EESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEV- 640

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
            Y+ I++  S  G ++K   ++ +M  +G  P +     LAK    E +  +  +LL   
Sbjct: 641 -YNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYT 699

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           ++S       +   +I     +G+MD    V   M   G+ P
Sbjct: 700 LKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 18/336 (5%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L+N     G+ ++A  +   +IE G  P +V+Y+T+++     +       + 
Sbjct: 412 TIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLK 471

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+ PD   ++++I    +   + E  D F +M   GL P   TY +LI  Y I 
Sbjct: 472 VEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIE 531

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +++++L D M ++G   P++ TYNVL+  +  +    EA  ++ K+      P+ +T
Sbjct: 532 GDLDKALRLHDEMIQKG-FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEIT 590

Query: 251 YNT---------------IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
           YNT               +   +   G  ++A+ V+  M   G + N     +II G+ K
Sbjct: 591 YNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSK 650

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL-MKEFRVNPDVI 354
            G I++A    + M   G  P+ V    L K          ++++L   +K  R+    +
Sbjct: 651 VGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAAL 710

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
               ++   S  G MD    +  DM  +G+ P + A
Sbjct: 711 A-KVLIGINSKEGNMDAVFNVLKDMALSGLLPYSSA 745


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 226/484 (46%), Gaps = 36/484 (7%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +N +    + +   ++N   + G   EA+   + +++ G  P   TYT+L+      K  
Sbjct: 186 LNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGV 245

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           ++ + +   + + G   + + +  +I+   E+G + EA+  F  M E    PT  TY  L
Sbjct: 246 DNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVL 305

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I     +G+  E++ L + M  +G  +PN+ TY VL+   C E  + EA  ++ +M+  G
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKG-CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           + P VVTYN +   Y + G  D A E++  ME N   PN RT   +I G CK+ K+ +A+
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M E  + P+L+ +N LI G  ++ D +    +L+LM E  + PD  TYS  ++  
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTL 484

Query: 364 STAGFMDKCKEIFDDMGKAGIK-----------------------------------PDA 388
              G +++   +FD +   G+K                                   P++
Sbjct: 485 CKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNS 544

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
           + Y++L +G  +E++ ++A  L+  M+  G  P VV +T +I     DG+ D A++VF+ 
Sbjct: 545 YTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNH 604

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M   G  P++ T+   +  Y         ++++  M   G+ P   T+ +L +     GL
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664

Query: 509 TKEA 512
           T  A
Sbjct: 665 THRA 668



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 215/429 (50%), Gaps = 2/429 (0%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C R   S T L++ L E G+  EA  +F ++ E    P++ TYT L+ AL+   R
Sbjct: 255 MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGR 314

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                ++ ++++E G +P+   +  +I+   +   M+EA     +M E GL P+  TYN 
Sbjct: 315 KVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNA 374

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY   G  +++ ++LDLM    +  PN RTYN L+   C ++ + +A  +++KM   
Sbjct: 375 LIDGYCKEGMIDDAFEILDLM-ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            + P ++TYN++     +  + + A  ++  M  NG+ P+  T  + I   CKEG+++EA
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                ++K  GV  N VI+  LI G+ ++   D    +L  M      P+  TY+ ++  
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
                 M +   +   M   G+KP    Y+IL    +++   + A ++   M+  G+ P+
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           V  +T  +  + S G ++   +V  KM E G+ P+L T+  L+ GY+      RA + L+
Sbjct: 614 VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673

Query: 483 IMKAFGVHP 491
            M   G  P
Sbjct: 674 CMVDTGCKP 682



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 132/512 (25%), Positives = 235/512 (45%), Gaps = 65/512 (12%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C TVR+ T L+ +L   G+  EA  +FN + E G +P++ TYT L+  L  + + +    
Sbjct: 296 CPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARK 355

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEA--------------------------- 161
           ++S++ E G+ P  + +NA+I+ + + G +++A                           
Sbjct: 356 MLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLC 415

Query: 162 --------MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
                   M    KM E  L+P+  TYN+LI G       E + +LL LM+  G V P+ 
Sbjct: 416 KKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV-PDQ 474

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            TY+V +   C E  + EA  +   + A G+K + V Y  +   Y + G+ D A  ++  
Sbjct: 475 WTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER 534

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M ++   PN  T  ++I G CKE K+KEA      M   GV P +V + +LI   ++   
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGA 594

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            D   +V   M      PDV TY+  ++A+ + G +++  ++   M + GI PD   Y++
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTV 654

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM-------------- 439
           L  GY R     +A + L  M+++G  P++ I + +I     +  M              
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN 714

Query: 440 ---------------DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
                          + A+++F+KM EHG + ++  +  L+ G+ +  +   A+ ++  M
Sbjct: 715 VNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHM 774

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           K  G+ P +  +  L +     G+  EA R++
Sbjct: 775 KERGMSPSEDIYNSLLDCCCKLGVYAEAVRLV 806



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 195/440 (44%), Gaps = 22/440 (5%)

Query: 88  PQEAQAIFNNL-IEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           PQ A + FN + +  G K ++ +Y+++L  L   +       I   + ++    + + F 
Sbjct: 81  PQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLF- 139

Query: 147 AVINAFSESGNMEEAMDTFWKMKESG---LTPTTSTYNTLIKGYG-IAGKPEESVKLLDL 202
                          ++ F KM   G     PT   YNT++          E     L+L
Sbjct: 140 --------------VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL 185

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           ++ +  + PN+ T+N +V  +C   N+ EA     K+  +G+ PD  TY ++   + +N 
Sbjct: 186 LNNQ--ISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNK 243

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
             D A EV + M   G Q N  +   +I G C+ G+I EAL+    M E    P +  + 
Sbjct: 244 GVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +LI        +     +   MKE    P+V TY+ +++       MD+ +++  +M + 
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK 363

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ P    Y+ L  GY +E   + A E+L  M  +   PN   +  +I G C    + +A
Sbjct: 364 GLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           + + +KM E  +SP+L T+ +L+ G  +      A  +L +M   G+ P + T+ +  + 
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483

Query: 503 RRATGLTKEAKRILSKIKNK 522
               G  +EA  +   +K K
Sbjct: 484 LCKEGRVEEAGTLFDSVKAK 503



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 124/488 (25%), Positives = 207/488 (42%), Gaps = 68/488 (13%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M   SC    R+  +L+  L ++ K  +A A+ N ++E    PSL+TY +L+        
Sbjct: 395 MESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVND 454

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
             S + ++S + ENG+ PD   ++  I+   + G +EEA   F  +K  G+      Y  
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY   GK + +  LL+ M  +  + PN  TYNVL+   C EK + EA +++ KM   
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACL-PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+KP VVTY  +     ++G  D A +V   M   G QP+  T    +  Y  +G ++E 
Sbjct: 574 GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEV 633

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKG------------FVEIMDRDGVDEVLAL------- 343
                 M E G+ P+LV + +LI G            F++ M   G    L +       
Sbjct: 634 DDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKN 693

Query: 344 ------MKEFRVNPDVITYST-----IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
                 MKE R    + + S      I + W T  +    K +F+ M + G   D   Y 
Sbjct: 694 LSHENRMKETRSEIGIDSVSNVNSVDIADVWKTLEYEIALK-LFEKMVEHGCTIDVSIYG 752

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS----------------- 435
            L  G+ +++  E+A+ L+  M E G  P+  I+ +++   C                  
Sbjct: 753 ALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVEN 812

Query: 436 ------------------DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
                             +GS ++A  VF  +   G + +   ++ L+ G  +       
Sbjct: 813 GLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDEC 872

Query: 478 EEILQIMK 485
            E++ IM+
Sbjct: 873 SELIDIME 880



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 155/340 (45%), Gaps = 9/340 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L +  K +EA ++   ++  G KP++VTYT L+  +     F+    + + +   G
Sbjct: 550 LIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLG 609

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD   + A ++A+   G +EE  D   KM E G+ P   TY  LI GY   G    + 
Sbjct: 610 YQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAF 669

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             L  M   G  KP+L   ++L++   +E  + E  + +   + S +       N++  A
Sbjct: 670 DFLKCMVDTG-CKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNV-------NSVDIA 721

Query: 258 YA-QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              +  E + A ++  +M  +G   +    G +I+G+C++ +++EA      MKE G+ P
Sbjct: 722 DVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSP 781

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +  I+N L+    ++        ++  M E  + P + +Y  ++      G  +K K +F
Sbjct: 782 SEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVF 841

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
             +   G   D  A+ +L  G ++    ++  EL+  M E
Sbjct: 842 HGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEE 881


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 227/445 (51%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++    G    A A+ +++   G KP +VT+ ++L  L   +RF+    +   +++  
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCS 257

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   FN +I  F   G +EEAM  + +M++ G+TP   +++ LI  +   GK + + 
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAA 317

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             L  M   G V P+   Y +++  +C   +++EA  V  +M   G  PDVVTYNT+   
Sbjct: 318 AYLREMKGLGLV-PDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNG 376

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +      AEE++ EM+  GV P+  T   +I GYC++G  ++AL+   T+    + P+
Sbjct: 377 LCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPD 436

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N LI G     D    +E+   M    + P+ +TYS ++++    G +++     D
Sbjct: 437 VVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLD 496

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G  P+   Y+ + KGY R    +K ++ L  M++    P+++ F T+I G+  + 
Sbjct: 497 EMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEE 556

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
           +M  A  VF+ M +  V P+  T+  ++ G+SE      A  + + M A G+ P + T++
Sbjct: 557 NMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYM 616

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L       G +KEA ++  ++ ++
Sbjct: 617 SLINGHVTAGNSKEAFQLHDEMMHR 641



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/469 (24%), Positives = 225/469 (47%), Gaps = 36/469 (7%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G P  A+  +  ++    + +  T   ++ +      F+   +++S++E+  + PD +  
Sbjct: 136 GWPHLAEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTH 195

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +I+A   +G+++ A+     M   GL P   T+N+++KG     + +++ ++   M  
Sbjct: 196 NVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMD- 254

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           + +V P++R++N+L+  +C    + EA     +M   G+ PDVV+++ +   ++  G+ D
Sbjct: 255 QCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMD 314

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A   + EM+  G+ P+G    ++I G+C+ G + EALR    M   G  P++V +N L+
Sbjct: 315 HAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLL 374

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G  +       +E+L  MKE  V PD+ T++T+++ +   G  +K  ++FD +    ++
Sbjct: 375 NGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLR 434

Query: 386 PDAHAYSILAKGYVREQEPEKAEEL----------------------------------- 410
           PD  AY+ L  G  R+ +  KA EL                                   
Sbjct: 435 PDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGF 494

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           L  M+  G  PN++ + +II G+C  G++ +  +   KM +  + P+L TF TL+ GY +
Sbjct: 495 LDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIK 554

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
                 A  +  IM+   V P   T+ ++       G  +EA R+  K+
Sbjct: 555 EENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKM 603



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 198/388 (51%), Gaps = 1/388 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           VRS   L+      G+ +EA   +  + + G  P +V+++ L+   + + + +   + + 
Sbjct: 262 VRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLR 321

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++  G+ PD + +  VI  F  +G+M EA+    +M   G  P   TYNTL+ G     
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQH 381

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  ++ +LL+ M   G V P+L T+  L+  +C + N  +A  +   +    ++PDVV Y
Sbjct: 382 RLLDAEELLNEMKERG-VTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAY 440

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++     + G+  +A E+  +M    + PN  T  I+I  +C++G+++EA  F   M  
Sbjct: 441 NSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVS 500

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PN++ +N +IKG+    +     + L  M +  + PD+IT++T+++ +     M  
Sbjct: 501 KGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHG 560

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F+ M K  ++PDA  Y+++  G+  +   E+A  +   M  SG  P+   + ++I+
Sbjct: 561 AFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMSLIN 620

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           G  + G+   A ++ D+M   G +P+ K
Sbjct: 621 GHVTAGNSKEAFQLHDEMMHRGFAPDDK 648



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 94/314 (29%), Positives = 168/314 (53%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V P++ T+NVL+ A     ++  A  ++  MA  G+KP +VT+N++     ++   D+A+
Sbjct: 188 VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAK 247

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           EV   M+   V P+ R+  I+I G+C+ G+++EA++F + M++ GV P++V F+ LI  F
Sbjct: 248 EVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLF 307

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
                 D     L  MK   + PD + Y+ ++  +  AG M +   + D+M   G  PD 
Sbjct: 308 STRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDV 367

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y+ L  G  ++     AEELL  M E G  P++  FTT+I G+C DG+ ++A+++FD 
Sbjct: 368 VTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDT 427

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           +    + P++  + +L+ G        +A E+   M A  + P   T+ +L ++    G 
Sbjct: 428 LLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQ 487

Query: 509 TKEAKRILSKIKNK 522
            +EA   L ++ +K
Sbjct: 488 VEEAFGFLDEMVSK 501



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 138/324 (42%), Gaps = 35/324 (10%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P  + +++L+R +   +   EA+     +    +       N +  A ++ G    AEE 
Sbjct: 85  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAALSRAGWPHLAEEA 144

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
              +  +  + N  T  I++  YCK  +  +A      M++  V P++V  N+LI     
Sbjct: 145 YRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFR 204

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
             D D    ++  M    + P ++T+++++         DK KE+F  M +  + PD  +
Sbjct: 205 AGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRS 264

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNV--------------------------- 423
           ++IL  G+ R  E E+A +    M + G  P+V                           
Sbjct: 265 FNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMK 324

Query: 424 --------VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
                   VI+T +I G+C  GSM  A+ V D+M   G  P++ T+ TL+ G  +  +  
Sbjct: 325 GLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLL 384

Query: 476 RAEEILQIMKAFGVHPQKSTFLLL 499
            AEE+L  MK  GV P   TF  L
Sbjct: 385 DAEELLNEMKERGVTPDLCTFTTL 408


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 225/453 (49%), Gaps = 2/453 (0%)

Query: 64  MNKESCRTVR-SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K+ CR    S T L++ L E G+  E   IF  + E    P++ TYT ++ AL    R
Sbjct: 30  MPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGR 89

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                ++ S++ E G +P+   +  +INA  +   +EE      +M E GL P+  TYN 
Sbjct: 90  RMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNA 149

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY   G  E + ++LDLM    +  PN RTYN L+  +C +KN+  A  ++ KM  S
Sbjct: 150 LIDGYCKEGMVEAAQEILDLM-HSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLES 208

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            + P VVTYN++     + G  D A  ++  M  NGV P+  T  + I   CK+G+I+EA
Sbjct: 209 RLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEA 268

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                ++KE G+  N VI+  LI G+ +    D  + +L  M      P+  TY+ +++ 
Sbjct: 269 NVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDG 328

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
                 + +   + + M + G+K     Y+IL    ++E + + A  +L  M+ SG+ P+
Sbjct: 329 LCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPD 388

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           V I+T  I  +C+ G++  A ++   M E GV P+  T+  ++  Y        A ++L+
Sbjct: 389 VYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLK 448

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
            M   G  P   T+  L +      LTK+ K +
Sbjct: 449 RMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNV 481



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 138/531 (25%), Positives = 242/531 (45%), Gaps = 46/531 (8%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C   + + T ++N++ +  K +E + I + ++E G  PS+ TY  L+     +  
Sbjct: 100 MRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGM 159

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
             +   I+  +  N  +P+   +N +I  F    N+  AM    KM ES LTP+  TYN+
Sbjct: 160 VEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNS 219

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G    G  + + +LL+LM+  G V P+  TY+V +   C +  I EA  + + +   
Sbjct: 220 LIHGQCKIGYLDSAYRLLNLMNENG-VVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEK 278

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+K + V Y  +   Y + G+ D A  ++  M      PN  T   +I G CKE K++EA
Sbjct: 279 GIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEA 338

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L    +M + G+   +  + +LI   ++  D D    +L  M      PDV  Y+  ++A
Sbjct: 339 LLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHA 398

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP- 421
           + T G + + +++   M + G+ PDA  Y+++   Y        A ++L  M ++G  P 
Sbjct: 399 FCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPS 458

Query: 422 ---------------------NVVIFTTIISGWCSDGS-------MDRAIEVFDKMCEHG 453
                                NV +  +I + + +D +        + A+E+F+KM EHG
Sbjct: 459 HHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKMLEHG 518

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            SPN+ T+  L+ G  +  +   A+++   M   GV P ++ +  L       G+  +A 
Sbjct: 519 CSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAV 578

Query: 514 RILSKIKNKERTNEMEAEEDIPVESLERLY-------HKEATTASYPNLLQ 557
           R++  +        ME      +ESL  L+        KE     + NLLQ
Sbjct: 579 RLVGAM--------MEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQ 621



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 214/490 (43%), Gaps = 44/490 (8%)

Query: 114 LAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL 173
           L    +    NS  S+ + + + G   + + +  +I+   E G ++E ++ F KM+E   
Sbjct: 11  LVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMREDDC 70

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
            PT  TY  ++     +G+  E++ L   M RE   +PN+ TY V++ A C E  + E  
Sbjct: 71  YPTVRTYTVIVHALFESGRRMEAINLFSEM-RERGCEPNIHTYTVMINAMCKETKLEEGR 129

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
            ++ +M   G+ P V TYN +   Y + G  + A+E++  M  N   PN RT   +I G+
Sbjct: 130 RILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGF 189

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           C++  +  A+     M E  + P++V +N LI G  +I   D    +L LM E  V PD 
Sbjct: 190 CRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQ 249

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK---------------------------- 385
            TYS  ++     G +++   +F+ + + GIK                            
Sbjct: 250 WTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDR 309

Query: 386 -------PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
                  P++  Y+ L  G  +E++ ++A  L+ +MI+ G    V  +T +I     +G 
Sbjct: 310 MLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGD 369

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
            D A  + D+M   G  P++  +   +  +        AE+++ +M   GV P   T+ L
Sbjct: 370 FDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTL 429

Query: 499 LAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLL-- 556
           + +A    GL   A  +L ++ +                 L +   KE  T  Y N+   
Sbjct: 430 VIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHT-----YSCLIKHLLKEELTKKYKNVALC 484

Query: 557 -QIPNVVSSD 565
             IPNV  +D
Sbjct: 485 DSIPNVFFAD 494



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 130/511 (25%), Positives = 216/511 (42%), Gaps = 72/511 (14%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+  SC    R+  +L+     +     A A+ + ++E    PS+VTY +L+        
Sbjct: 170 MHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGY 229

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +S + +++ + ENG+ PD   ++  I+   + G +EEA   F  +KE G+      Y  
Sbjct: 230 LDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTA 289

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY  AGK +++  LLD M  E +  PN  TYN L+   C E+ + EA  +M  M   
Sbjct: 290 LIDGYCKAGKMDDANSLLDRMLTE-DCLPNSSTYNALIDGLCKERKVQEALLLMESMIQK 348

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+K  V TY  +  A  + G+ D A  ++ +M  +G QP+       I  +C  G IKEA
Sbjct: 349 GLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEA 408

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM-- 360
                 M E GV P+ + + L+I  +  +   +   +VL  M +   +P   TYS ++  
Sbjct: 409 EDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKH 468

Query: 361 ----------------------------NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
                                       + W    F +   E+F+ M + G  P+ + Y+
Sbjct: 469 LLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKF-ETALELFEKMLEHGCSPNINTYA 527

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            L  G  +      A++L   M E G  P+  I+ ++++  C  G    A+ +   M EH
Sbjct: 528 KLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEH 587

Query: 453 GVSPNLKTFETLMWG---------------------YSEARQPWR--------------A 477
           G  P L++   L  G                     Y++    W+               
Sbjct: 588 GHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGC 647

Query: 478 EEILQIMKAFG--VHPQKSTFLLLAEARRAT 506
            E+L +M+A G  +HPQ  T+ +L E    T
Sbjct: 648 SELLGVMEARGCQIHPQ--TYRMLIEGLDGT 676



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 177/381 (46%), Gaps = 10/381 (2%)

Query: 148 VINAFSESGNMEEA---------MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           ++N + + GN+ EA            F  M + G      +Y  LI G    G+ +E + 
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           +   M RE +  P +RTY V+V A        EA N+  +M   G +P++ TY  +  A 
Sbjct: 61  IFKKM-REDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAM 119

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
            +  + ++   ++ EM   G+ P+  T   +I GYCKEG ++ A      M     +PN 
Sbjct: 120 CKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNE 179

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
             +N LI GF    +      +L+ M E R+ P V+TY+++++     G++D    + + 
Sbjct: 180 RTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNL 239

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M + G+ PD   YS+      ++   E+A  L  ++ E G   N VI+T +I G+C  G 
Sbjct: 240 MNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGK 299

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           MD A  + D+M      PN  T+  L+ G  + R+   A  +++ M   G+     T+ +
Sbjct: 300 MDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTI 359

Query: 499 LAEARRATGLTKEAKRILSKI 519
           L  A    G    A RIL ++
Sbjct: 360 LIVAMLKEGDFDYAHRILDQM 380


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/484 (25%), Positives = 226/484 (46%), Gaps = 36/484 (7%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +N +    + +   ++N   + G   EA+   + +++ G  P   TYT+L+      K  
Sbjct: 186 LNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGV 245

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           ++ + +   + + G   + + +  +I+   E+G + EA+  F  M E    PT  TY  L
Sbjct: 246 DNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVL 305

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I     +G+  E++ L + M  +G  +PN+ TY VL+   C E  + EA  ++ +M+  G
Sbjct: 306 IYALSGSGRKVEALNLFNEMKEKG-CEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           + P VVTYN +   Y + G  D A E++  ME N   PN RT   +I G CK+ K+ +A+
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M E  + P+L+ +N LI G  ++ D +    +L+LM E  + PD  TYS  ++  
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTL 484

Query: 364 STAGFMDKCKEIFDDMGKAGIK-----------------------------------PDA 388
              G +++   +FD +   G+K                                   P++
Sbjct: 485 CKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNS 544

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
           + Y++L +G  +E++ ++A  L+  M+  G  P VV +T +I     DG+ D A++VF+ 
Sbjct: 545 YTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNH 604

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M   G  P++ T+   +  Y         ++++  M   G+ P   T+ +L +     GL
Sbjct: 605 MVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGL 664

Query: 509 TKEA 512
           T  A
Sbjct: 665 THRA 668



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 235/501 (46%), Gaps = 54/501 (10%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C TVR+ T L+ +L   G+  EA  +FN + E G +P++ TYT L+  L  + + +    
Sbjct: 296 CPTVRTYTVLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARK 355

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEA--------------------------- 161
           ++S++ E G+ P  + +NA+I+ + + G +++A                           
Sbjct: 356 MLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLC 415

Query: 162 --------MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
                   M    KM E  L+P+  TYN+LI G       E + +LL LM+  G V P+ 
Sbjct: 416 KKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLV-PDQ 474

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            TY+V +   C E  + EA  +   + A G+K + V Y  +   Y + G+ D A  ++  
Sbjct: 475 WTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLER 534

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M ++   PN  T  ++I G CKE K+KEA      M   GV P +V + +LI   ++   
Sbjct: 535 MLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGA 594

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            D   +V   M      PDV TY+  ++A+ + G +++  ++   M + GI PD   Y++
Sbjct: 595 FDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTV 654

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM-------------- 439
           L  GY R     +A + L  M+++G  P++ I + +I     +  M              
Sbjct: 655 LIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSVSN 714

Query: 440 ----DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
               + A+++F+KM EHG + ++  +  L+ G+ +  +   A+ ++  MK  G+ P +  
Sbjct: 715 TLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDI 774

Query: 496 FLLLAEARRATGLTKEAKRIL 516
           +  L +     G+  EA R++
Sbjct: 775 YNSLLDCCCKLGVYAEAVRLV 795



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 229/469 (48%), Gaps = 5/469 (1%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C R   S T L++ L E G+  EA  +F ++ E    P++ TYT L+ AL+   R
Sbjct: 255 MPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGR 314

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                ++ ++++E G +P+   +  +I+   +   M+EA     +M E GL P+  TYN 
Sbjct: 315 KVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNA 374

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY   G  +++ ++LDLM    +  PN RTYN L+   C ++ + +A  +++KM   
Sbjct: 375 LIDGYCKEGMIDDAFEILDLM-ESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLER 433

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            + P ++TYN++     +  + + A  ++  M  NG+ P+  T  + I   CKEG+++EA
Sbjct: 434 KLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEA 493

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                ++K  GV  N VI+  LI G+ ++   D    +L  M      P+  TY+ ++  
Sbjct: 494 GTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEG 553

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
                 M +   +   M   G+KP    Y+IL    +++   + A ++   M+  G+ P+
Sbjct: 554 LCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPD 613

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           V  +T  +  + S G ++   +V  KM E G+ P+L T+  L+ GY+      RA + L+
Sbjct: 614 VCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLK 673

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAE 531
            M   G  P      +L +        KE +   S+I     +N +E E
Sbjct: 674 CMVDTGCKPSLYIVSILIKNLSHENRMKETR---SEIGIDSVSNTLEYE 719



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 213/497 (42%), Gaps = 55/497 (11%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M   SC    R+  +L+  L ++ K  +A A+ N ++E    PSL+TY +L+        
Sbjct: 395 MESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVND 454

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
             S + ++S + ENG+ PD   ++  I+   + G +EEA   F  +K  G+      Y  
Sbjct: 455 LESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTA 514

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY   GK + +  LL+ M  +  + PN  TYNVL+   C EK + EA +++ KM   
Sbjct: 515 LIDGYCKVGKIDVAYSLLERMLNDACL-PNSYTYNVLIEGLCKEKKMKEASSLVAKMLTM 573

Query: 243 GMKP-----------------------------------DVVTYNTIATAYAQNGEADQA 267
           G+KP                                   DV TY     AY   G  ++ 
Sbjct: 574 GVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEV 633

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
           ++VI +M   G+ P+  T  ++I GY + G    A  F + M + G  P+L I ++LIK 
Sbjct: 634 DDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKN 693

Query: 328 FV------EIMDRDGVDEV-------LAL-----MKEFRVNPDVITYSTIMNAWSTAGFM 369
                   E     G+D V       +AL     M E     DV  Y  ++  +     +
Sbjct: 694 LSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERL 753

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           ++ + +   M + G+ P    Y+ L     +     +A  L+  M+E+G  P +  +  +
Sbjct: 754 EEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLL 813

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G   +GS ++A  VF  +   G + +   ++ L+ G  +        E++ IM+  G 
Sbjct: 814 VCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKGC 873

Query: 490 HPQKSTFLLLAEARRAT 506
            P   T+ LL E    T
Sbjct: 874 QPNPLTYSLLIEGLERT 890



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 119/503 (23%), Positives = 217/503 (43%), Gaps = 34/503 (6%)

Query: 88  PQEAQAIFNNL-IEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           PQ A + FN + +  G K ++ +Y+++L  L   +       I   + ++    + + F 
Sbjct: 81  PQTALSFFNWIALRPGFKHNVHSYSSMLNILIRARLLGVAEKIRISMIKSCCSIEDVLF- 139

Query: 147 AVINAFSESGNMEEAMDTFWKMKESG---LTPTTSTYNTLIKGYG-IAGKPEESVKLLDL 202
                          ++ F KM   G     PT   YNT++          E     L+L
Sbjct: 140 --------------VLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLEL 185

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           ++ +  + PN+ T+N +V  +C   N+ EA     K+  +G+ PD  TY ++   + +N 
Sbjct: 186 LNNQ--ISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNK 243

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
             D A EV + M   G Q N  +   +I G C+ G+I EAL+    M E    P +  + 
Sbjct: 244 GVDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYT 303

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +LI        +     +   MKE    P+V TY+ +++       MD+ +++  +M + 
Sbjct: 304 VLIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEK 363

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ P    Y+ L  GY +E   + A E+L  M  +   PN   +  +I G C    + +A
Sbjct: 364 GLIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKA 423

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           + + +KM E  +SP+L T+ +L+ G  +      A  +L +M   G+ P + T+ +  + 
Sbjct: 424 MALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDT 483

Query: 503 RRATGLTKEAKRILSKIKNK-ERTNEM-----------EAEEDIPVESLERLYHKEATTA 550
               G  +EA  +   +K K  + NE+             + D+    LER+ +      
Sbjct: 484 LCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPN 543

Query: 551 SYPNLLQIPNVVSSDQKGSAAAL 573
           SY   + I  +    +   A++L
Sbjct: 544 SYTYNVLIEGLCKEKKMKEASSL 566


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/477 (28%), Positives = 233/477 (48%), Gaps = 47/477 (9%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS------- 131
           +++ +  GKP  A  +F  +I    KP+L+T  TLL  L    R+ S  SI S       
Sbjct: 138 LSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLV---RYPSSFSIASAREVFDD 194

Query: 132 -----------------------------------QVEENGMDPDSIFFNAVINAFSESG 156
                                               V E  ++PD++ +N ++ A S+ G
Sbjct: 195 MVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKG 254

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            + +  D    MK +GL P   TYN L+ GY   G  +E+ ++++LM ++ N+ P+L TY
Sbjct: 255 RLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM-KQTNILPDLCTY 313

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N+L+   CN  +I E   +M  M +  ++PDVVTYNT+     + G + +A++++ +ME+
Sbjct: 314 NILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMEN 373

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE-YGVHPNLVIFNLLIKGFVEIMDRD 335
           +GV+PN  T  I +   CKE K +E  R  + + E +G  P++V ++ LIK ++++ D  
Sbjct: 374 DGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLS 433

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
           G  E++  M +  +  + IT +TI++A      +D+   + D   K G   D   Y  L 
Sbjct: 434 GALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLI 493

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            GY RE++ EKA E+   M      P V  F ++I G C  G  + A+E FD++ E G+ 
Sbjct: 494 MGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLL 553

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           P+  TF +++ GY +  +  +A E           P   T  +L       G+T++A
Sbjct: 554 PDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 124/505 (24%), Positives = 238/505 (47%), Gaps = 47/505 (9%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           V++   L+N     GK ++A  +   ++ E    P  VTY T+L A++ + R + +  ++
Sbjct: 204 VKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLSDVKDLL 263

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++ NG+ P+ + +N ++  + + G+++EA      MK++ + P   TYN LI G   A
Sbjct: 264 LDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILINGVCNA 323

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT-EAWNVMHKMAASGMKP--- 246
           G   E ++L+D+M +   ++P++ TYN L+   C E  ++ EA  +M +M   G+KP   
Sbjct: 324 GSIREGLELMDVM-KSLKLQPDVVTYNTLIDG-CFELGLSLEAKKLMEQMENDGVKPNQV 381

Query: 247 ---------------------------------DVVTYNTIATAYAQNGEADQAEEVIVE 273
                                            D+VTY+T+  AY + G+   A E++ E
Sbjct: 382 THNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M   G++ N  T   I+   CKE K+ EA     +  + G   + V +  LI G+     
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYFREEK 501

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            +   E+   MK  ++ P V T+++++      G  +   E FD++ ++G+ PD   ++ 
Sbjct: 502 VEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDCTFNS 561

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC-EH 452
           +  GY +E   EKA E     I+  F P+      +++G C +G  ++A+  F+ +  E 
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLITER 621

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            V  +  T+ T++  + + ++   A ++L  M+   + P + T+  +  +    G   EA
Sbjct: 622 EV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDGKLSEA 679

Query: 513 KRILSKIKNK----ERTNEMEAEED 533
             +L K   K    +R   +E E++
Sbjct: 680 DELLKKFSGKFGSMKRNLHLETEKN 704



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 69/254 (27%), Positives = 129/254 (50%), Gaps = 4/254 (1%)

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG---YCKEGKIKEA 302
           P    ++   +AY   G+   A +V  +M    ++PN  TC  ++ G   Y     I  A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGF-VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
                 M + GV  ++  FN+L+ G+ +E    D +  +  ++ EF VNPD +TY+TI+ 
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
           A S  G +   K++  DM + G+ P+   Y+ L  GY +    ++A +++  M ++   P
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           ++  +  +I+G C+ GS+   +E+ D M    + P++ T+ TL+ G  E      A++++
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368

Query: 482 QIMKAFGVHPQKST 495
           + M+  GV P + T
Sbjct: 369 EQMENDGVKPNQVT 382



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/302 (25%), Positives = 143/302 (47%), Gaps = 5/302 (1%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA---YAQNGEADQA 267
           P+   +++ + A+ +      A  V  KM    +KP+++T NT+      Y  +     A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL-RFARTMKEYGVHPNLVIFNLLIK 326
            EV  +M   GV  + +T  ++++GYC EGK+++AL    R + E+ V+P+ V +N ++K
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
              +      V ++L  MK   + P+ +TY+ ++  +   G + +  +I + M +  I P
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   Y+IL  G        +  EL+  M      P+VV + T+I G    G    A ++ 
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368

Query: 447 DKMCEHGVSPNLKTFE-TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           ++M   GV PN  T   +L W   E ++     ++ ++++  G  P   T+  L +A   
Sbjct: 369 EQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLK 428

Query: 506 TG 507
            G
Sbjct: 429 VG 430



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 118/250 (47%), Gaps = 4/250 (1%)

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
           H    P+     I +S Y   GK   AL+  + M    + PNL+  N L+ G V      
Sbjct: 124 HLSPPPSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183

Query: 336 GV---DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM-GKAGIKPDAHAY 391
            +    EV   M +  V+ DV T++ ++N +   G ++    + + M  +  + PD   Y
Sbjct: 184 SIASAREVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTY 243

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + + K   ++      ++LL+ M  +G  PN V +  ++ G+C  GS+  A ++ + M +
Sbjct: 244 NTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
             + P+L T+  L+ G   A       E++ +MK+  + P   T+  L +     GL+ E
Sbjct: 304 TNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLE 363

Query: 512 AKRILSKIKN 521
           AK+++ +++N
Sbjct: 364 AKKLMEQMEN 373



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/201 (23%), Positives = 91/201 (45%), Gaps = 37/201 (18%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+  L   GK + A   F+ L E                              
Sbjct: 520 TVTTFNSLIGGLCHHGKTELAMEKFDELAE------------------------------ 549

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
                +G+ PD   FN++I  + + G +E+A + + +  +    P   T N L+ G    
Sbjct: 550 -----SGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E+++   + +  E  V  +  TYN ++ A+C +K + EA++++ +M    ++PD  T
Sbjct: 605 GMTEKALNFFNTLITEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFT 662

Query: 251 YNTIATAYAQNGEADQAEEVI 271
           YN+I T+  ++G+  +A+E++
Sbjct: 663 YNSIITSLMEDGKLSEADELL 683


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 218/445 (48%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L+E  K +  +++++ +   G KP +VT+ TL+ AL    +  +   ++ ++   G
Sbjct: 60  LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 119

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   F  ++  F E G++E A+    +M E G + T  T N LI GY   G+ E+++
Sbjct: 120 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 179

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             +     +G  +P+  TYN  V   C   ++  A  VM  M   G  PDV TYN +   
Sbjct: 180 GYIQQEIADG-FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 238

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +NG+ ++A+ ++ +M   G  P+  T   +I+  C   +++EAL  AR +   GV P+
Sbjct: 239 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 298

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  FN+LI    ++ D      +   MK     PD +TY+T+++   + G + K  ++  
Sbjct: 299 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 358

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM   G       Y+ +  G  ++   E+AEE+   M   G   N + F T+I G C D 
Sbjct: 359 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 418

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D A E+ ++M   G+ PN  T+ +++  Y +     +A +IL+ M A G      T+ 
Sbjct: 419 KIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 478

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L       G T+ A ++L  ++ K
Sbjct: 479 TLINGLCKAGRTQVALKVLRGMRIK 503



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 209/450 (46%), Gaps = 2/450 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T LM   +E G  + A  +   ++E G   + VT   L+       R       + Q 
Sbjct: 126 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 185

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G +PD I +N  +N   ++ ++  A+     M + G  P   TYN ++      G+ 
Sbjct: 186 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 245

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           EE+  +L+ M   G + P++ T+N L+ A C    + EA ++  ++   G+ PDV T+N 
Sbjct: 246 EEAKGILNQMVDRGCL-PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 304

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A  + G+   A  +  EM+++G  P+  T   +I   C  GK+ +AL   + M+  G
Sbjct: 305 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 364

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              + + +N +I G  + M  +  +EV   M    ++ + IT++T+++       +D   
Sbjct: 365 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 424

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+ + M   G++P+   Y+ +   Y ++ + +KA ++L TM  +GF  +VV + T+I+G 
Sbjct: 425 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 484

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G    A++V   M   G+ P  K +  ++           A  + + M   G  P  
Sbjct: 485 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 544

Query: 494 STFLLLAEAR-RATGLTKEAKRILSKIKNK 522
            T+ ++     R  G  KEA   + ++ +K
Sbjct: 545 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 574



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/320 (26%), Positives = 156/320 (48%), Gaps = 9/320 (2%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           ++ +   YN L+        +    +V  +M A G+KPDVVT+NT+  A  +  +   A 
Sbjct: 50  IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 109

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            ++ EM   GV P+  T   ++ G+ +EG I+ ALR    M E G     V  N+LI G+
Sbjct: 110 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 169

Query: 329 VEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            ++     V++ L  +++   +   PD ITY+T +N       +    ++ D M + G  
Sbjct: 170 CKL---GRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHD 226

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   Y+I+     +  + E+A+ +L  M++ G  P++  F T+I+  C+   ++ A+++
Sbjct: 227 PDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDL 286

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
             ++   GVSP++ TF  L+    +   P  A  + + MK  G  P + T+  L +   +
Sbjct: 287 ARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCS 346

Query: 506 TGLTKEAKRILSKIKNKERT 525
            G   +A   L  +K+ E T
Sbjct: 347 LGKLGKA---LDLLKDMEST 363



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 123/279 (44%)

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G++ D V YN +     +  +    E V  EM   G++P+  T   ++   C+  +++ A
Sbjct: 49  GIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTA 108

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           +     M   GV P+   F  L++GFVE    +    V A M E   +   +T + ++N 
Sbjct: 109 VLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLING 168

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +   G ++            G +PD   Y+    G  +      A +++  M++ G  P+
Sbjct: 169 YCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPD 228

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           V  +  +++  C +G ++ A  + ++M + G  P++ TF TL+       +   A ++ +
Sbjct: 229 VFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLAR 288

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            +   GV P   TF +L  A    G    A R+  ++KN
Sbjct: 289 QVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 327



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 38/270 (14%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M    C R+  +   +++ L ++ + +EA+ +F+ +   G   + +T+ TL+  L   K+
Sbjct: 360 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 419

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    +++Q+   G+ P++I +N+++  + + G++++A D    M  +G      TY T
Sbjct: 420 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 479

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G   AG+ + ++K+L  M  +G ++P  + YN ++++     NI +A ++  +MA  
Sbjct: 480 LINGLCKAGRTQVALKVLRGMRIKG-MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 538

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK-EGKIKE 301
           G  PD +TY                                    I+  G C+  G IKE
Sbjct: 539 GEPPDALTYK-----------------------------------IVFRGLCRGGGPIKE 563

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
           A  F   M + G  P    F +L +G + +
Sbjct: 564 AFDFMLEMVDKGFIPEFSSFRMLAEGLLNL 593



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 100/211 (47%)

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           +G+  + V++N L+   VE      ++ V + M    + PDV+T++T+M A   A  +  
Sbjct: 48  FGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRT 107

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + ++M   G+ PD   ++ L +G+V E   E A  +   M+E G     V    +I+
Sbjct: 108 AVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLIN 167

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C  G ++ A+    +    G  P+  T+ T + G  +      A +++ +M   G  P
Sbjct: 168 GYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDP 227

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              T+ ++       G  +EAK IL+++ ++
Sbjct: 228 DVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 258


>gi|345293243|gb|AEN83113.1| AT5G21222-like protein, partial [Capsella rubella]
 gi|345293245|gb|AEN83114.1| AT5G21222-like protein, partial [Capsella rubella]
 gi|345293247|gb|AEN83115.1| AT5G21222-like protein, partial [Capsella rubella]
 gi|345293249|gb|AEN83116.1| AT5G21222-like protein, partial [Capsella rubella]
 gi|345293251|gb|AEN83117.1| AT5G21222-like protein, partial [Capsella rubella]
 gi|345293253|gb|AEN83118.1| AT5G21222-like protein, partial [Capsella rubella]
 gi|345293255|gb|AEN83119.1| AT5G21222-like protein, partial [Capsella rubella]
 gi|345293257|gb|AEN83120.1| AT5G21222-like protein, partial [Capsella rubella]
          Length = 160

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 100/160 (62%), Positives = 133/160 (83%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           KPS++TYTTL+ ALT QK F+S+ S++S+VE+NG+ PD+I FNA+INA SESGN+++AM 
Sbjct: 1   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 60

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
            F KMKESG  PTTST+NTLIKGYG  GK EES +LL+LM R+  ++PN RT N+LV+AW
Sbjct: 61  IFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 120

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
           CN++ I EAWN+++KM + G+KPDVVT+NT+A AYA+ GE
Sbjct: 121 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIGE 160



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 85/160 (53%), Gaps = 6/160 (3%)

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSR--EGNVKPNLRTYNVLVRAWCNEKNITEA 232
           P+  TY TL+       + +    LL L+S+  +  +KP+   +N ++ A     N+ +A
Sbjct: 2   PSIITYTTLVTALT---RQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQA 58

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI-VEMEHNGVQPNGRTCGIIIS 291
             +  KM  SG KP   T+NT+   Y + G+ +++  ++ + +    +QPN RTC I++ 
Sbjct: 59  MKIFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQ 118

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            +C + KI+EA      M+ YGV P++V FN L + +  I
Sbjct: 119 AWCNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARI 158



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 46/159 (28%), Positives = 89/159 (55%), Gaps = 1/159 (0%)

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           KP++ TY  LV A   +K+     +++ K+  +G+KPD + +N I  A +++G  DQA +
Sbjct: 1   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 60

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGF 328
           +  +M+ +G +P   T   +I GY K GK++E+ R    M ++  + PN    N+L++ +
Sbjct: 61  IFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAW 120

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
                 +    ++  M+ + V PDV+T++T+  A++  G
Sbjct: 121 CNQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIG 159



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 81/155 (52%), Gaps = 1/155 (0%)

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+++ +  L+           +  +++ +++  + PD I ++ I+NA S +G +D+  +I
Sbjct: 2   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 61

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI-ESGFHPNVVIFTTIISGWC 434
           F+ M ++G KP    ++ L KGY +  + E++  LL  M+ +    PN      ++  WC
Sbjct: 62  FEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWC 121

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +   ++ A  +  KM  +GV P++ TF TL   Y+
Sbjct: 122 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYA 156



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 72/158 (45%), Gaps = 1/158 (0%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P +ITY+T++ A +          +   + K G+KPD   ++ +          ++A ++
Sbjct: 2   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 61

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYS 469
              M ESG  P    F T+I G+   G ++ +  + + M  +  + PN +T   L+  + 
Sbjct: 62  FEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWC 121

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
             R+   A  I+  M+++GV P   TF  LA A    G
Sbjct: 122 NQRKIEEAWNIVYKMQSYGVKPDVVTFNTLARAYARIG 159



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 32/119 (26%), Positives = 61/119 (51%), Gaps = 1/119 (0%)

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           KP    Y+ L     R++       L+  + ++G  P+ ++F  II+     G++D+A++
Sbjct: 1   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMK 60

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM-KAFGVHPQKSTFLLLAEA 502
           +F+KM E G  P   TF TL+ GY +  +   +  +L++M +   + P   T  +L +A
Sbjct: 61  IFEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLLELMLRDEMLQPNDRTCNILVQA 119



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/194 (19%), Positives = 80/194 (41%), Gaps = 36/194 (18%)

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           KP ++TY T+ TA  +         +I ++E NG++                        
Sbjct: 1   KPSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLK------------------------ 36

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
                      P+ ++FN +I    E  + D   ++   MKE    P   T++T++  + 
Sbjct: 37  -----------PDTILFNAIINASSESGNLDQAMKIFEKMKESGCKPTTSTFNTLIKGYG 85

Query: 365 TAGFMDKCKEIFDDMGK-AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
             G +++   + + M +   ++P+    +IL + +  +++ E+A  ++  M   G  P+V
Sbjct: 86  KIGKLEESSRLLELMLRDEMLQPNDRTCNILVQAWCNQRKIEEAWNIVYKMQSYGVKPDV 145

Query: 424 VIFTTIISGWCSDG 437
           V F T+   +   G
Sbjct: 146 VTFNTLARAYARIG 159



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/96 (23%), Positives = 47/96 (48%)

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+++ +TT+++           + +  K+ ++G+ P+   F  ++   SE+    +A +I
Sbjct: 2   PSIITYTTLVTALTRQKHFHSLLSLISKVEKNGLKPDTILFNAIINASSESGNLDQAMKI 61

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
            + MK  G  P  STF  L +     G  +E+ R+L
Sbjct: 62  FEKMKESGCKPTTSTFNTLIKGYGKIGKLEESSRLL 97


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 230/457 (50%), Gaps = 14/457 (3%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M + +CR  V + T LMN L   G+  EA A+ + ++E G +P+ +TY T++  +  +  
Sbjct: 175 MFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGD 234

Query: 123 FNSIHSIMSQVEE-NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
             S  +++ ++EE + + P+ + ++A+I++  + G   +A + F +M+E G+ P   TYN
Sbjct: 235 TVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYN 294

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           ++I G+  +G+  ++ +LL  M  E  + P++ TYN L+ A+  E    EA  +  +M  
Sbjct: 295 SMIVGFCSSGRWSDAEQLLQEM-LERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G+ P+ +TYN++   + +    D AE++   M   G  P+  T   +I GYC   +I +
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
            +     M   G+  N V +N LI GF  + D +   ++   M    V PD++T +T+++
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473

Query: 362 AWSTAGFMDKCKEIFDDMGKA-----------GIKPDAHAYSILAKGYVREQEPEKAEEL 410
                G +    E+F  M K+           G++PD   Y+IL  G + E +  +AEEL
Sbjct: 474 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 533

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
              M   G  P+ + ++++I G C    +D A ++F  M     SPN+ TF TL+ GY +
Sbjct: 534 YEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCK 593

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           A +     E+   M   G+      ++ L    R  G
Sbjct: 594 AGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVG 630



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 214/418 (51%), Gaps = 12/418 (2%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +++SL + G+  +AQ +F  + E G  P L TY +++       R++    ++ ++ E
Sbjct: 259 SAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLE 318

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + PD + +NA+INAF + G   EA + + +M   G+ P T TYN++I G+    + + 
Sbjct: 319 RKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDA 378

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  +  LM+ +G   P++ T+  L+  +C  K I +   ++H+M   G+  + VTYNT+ 
Sbjct: 379 AEDMFYLMATKG-CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 437

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY--- 312
             +   G+ + A ++  +M  +GV P+  TC  ++ G C  GK+K+AL   + M++    
Sbjct: 438 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 497

Query: 313 --------GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
                   GV P+++ +N+LI G +        +E+   M    + PD ITYS++++   
Sbjct: 498 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 557

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
               +D+  ++F  MG     P+   ++ L  GY +    +   EL   M   G   + +
Sbjct: 558 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 617

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           I+ T+I G+   G+++ A+++F +M   GV P+  T   ++ G+    +  RA  +L+
Sbjct: 618 IYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 675



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 216/453 (47%), Gaps = 16/453 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   L+       K   A + F  + + G  P +VT+TTLL  L ++ R +       
Sbjct: 114 IYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFH 173

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ E    P+ + F  ++N     G + EA+    +M E GL PT  TY T++ G    G
Sbjct: 174 QMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKG 233

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++ LL  M    ++ PN+  Y+ ++ + C +   ++A N+  +M   G+ PD+ TY
Sbjct: 234 DTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTY 293

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++   +  +G    AE+++ EM    + P+  T   +I+ + KEGK  EA      M  
Sbjct: 294 NSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLP 353

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN + +N +I GF +    D  +++  LM     +PDV T++T+++ +  A  +D 
Sbjct: 354 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 413

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+  +M + G+  +   Y+ L  G+    +   A +L   MI SG  P++V   T++ 
Sbjct: 414 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 473

Query: 432 GWCSDGSMDRAIEVFDKMCE-----------HGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           G C +G +  A+E+F  M +           +GV P++ T+  L+ G     +   AEE+
Sbjct: 474 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 533

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            + M   G+ P   T+     +    GL K+++
Sbjct: 534 YEEMPHRGIVPDTITY-----SSMIDGLCKQSR 561



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 225/465 (48%), Gaps = 6/465 (1%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL +   E    ++A  +F++++     PS+V +  L+  +   +R + + S+  ++E  
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMERK 108

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            +  D   FN +I  F     +  A+ TF K+ + GL P   T+ TL+ G  +  +  E+
Sbjct: 109 QIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEA 168

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +     M  E   +PN+ T+  L+   C E  I EA  ++ +M   G++P  +TY TI  
Sbjct: 169 LDFFHQMF-ETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 257 AYAQNGEADQAEEVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              + G+   A  ++ +ME  + + PN      II   CK+G+  +A      M+E G+ 
Sbjct: 228 GMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+L  +N +I GF         +++L  M E +++PDV+TY+ ++NA+   G   +  E+
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAEL 347

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           +D+M   GI P+   Y+ +  G+ ++   + AE++   M   G  P+V  FTT+I G+C 
Sbjct: 348 YDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCG 407

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              +D  +E+  +M   G+  N  T+ TL+ G+        A ++ Q M + GV P   T
Sbjct: 408 AKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVT 467

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLE 540
              L +     G  K+A  +   ++     ++M+ +   P   +E
Sbjct: 468 CNTLLDGLCDNGKLKDALEMFKAMQK----SKMDLDASHPFNGVE 508



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 107/218 (49%), Gaps = 12/218 (5%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNL------IEGGH-----KPSLVTYTTLLAAL 117
           C  + +   L++ L + GK ++A  +F  +      ++  H     +P ++TY  L+  L
Sbjct: 462 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL 521

Query: 118 TIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT 177
             + +F     +  ++   G+ PD+I ++++I+   +   ++EA   F  M     +P  
Sbjct: 522 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNV 581

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
            T+NTLI GY  AG+ ++ ++L   M R G V   +  Y  L+  +    NI  A ++  
Sbjct: 582 VTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI-IYITLIYGFRKVGNINGALDIFQ 640

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           +M +SG+ PD +T   + T +    E ++A  ++ +++
Sbjct: 641 EMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 678


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 211/385 (54%), Gaps = 5/385 (1%)

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
           I+K F+    ++ ++ E G  P+ + +  +I+   + G +E+A D F++M + GL     
Sbjct: 179 IEKSFD----LLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEW 234

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           TY  LI G    G  ++  ++ + M  +G V PNL TYN ++   C +    +A+ +  +
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEDG-VFPNLYTYNCVMNQHCKDGRTKDAFKLFDE 293

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M   G+  ++VTYNT+     +  +A++A +V+ +M+ +G+ PN  T   +I G+C  GK
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGK 353

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           + +AL   R +K  G+ P+LV +N+L+ GF +  D  G  +V+  M+E  + P  ITY+ 
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTI 413

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++ ++    M+K  ++   M + G+ PD H YS+L  G+  + +  +A  L   M+   
Sbjct: 414 LIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKK 473

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PN VI+ T++ G+C +GS  RA+ +F +M E  + PN+ ++  ++    + R+   AE
Sbjct: 474 LEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAE 533

Query: 479 EILQIMKAFGVHPQKSTFLLLAEAR 503
            +++ M   G+ P  S   L++ A+
Sbjct: 534 GLVEKMIDTGIDPSDSILNLISRAK 558



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 213/445 (47%), Gaps = 8/445 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N+ ++      + + FN +++ G  P    +  LL  +     FN      ++  +  
Sbjct: 100 MINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNE-SKIK 158

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +D D   F  VI    E+G +E++ D   +++E G +P    Y TLI G    G+ E++ 
Sbjct: 159 VDLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAK 218

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M + G V  N  TY VL+          + + +  KM   G+ P++ TYN +   
Sbjct: 219 DLFFEMGKFGLV-ANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQ 277

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + ++G    A ++  EM   GV  N  T   +I G C+E K  EA +    MK  G++PN
Sbjct: 278 HCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPN 337

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
           L+ +N LI GF  +     + + L+L ++ +   ++P ++TY+ +++ +   G      +
Sbjct: 338 LITYNTLIDGFCGV---GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +  +M + GIKP    Y+IL   + R    EKA +L   M E G  P+V  ++ +I G+C
Sbjct: 395 VVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFC 454

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G M+ A  +F  M    + PN   + T++ GY +    +RA  + + M+   + P  +
Sbjct: 455 IKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVA 514

Query: 495 TFLLLAEARRATGLTKEAKRILSKI 519
           ++  + E       +KEA+ ++ K+
Sbjct: 515 SYRYMIEVLCKERKSKEAEGLVEKM 539



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 211/440 (47%), Gaps = 36/440 (8%)

Query: 119 IQKRFNSIHSIMSQVEENGM-DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT 177
           IQ +F +  S++  V E+   +  S  +  +INA+ +S +++ ++  F +M + G  P +
Sbjct: 70  IQSQFFTSSSLLHYVTESETSETKSRLYEVMINAYVQSQSLDSSISYFNEMVDKGFVPGS 129

Query: 178 STYNTL----------------------------------IKGYGIAGKPEESVKLLDLM 203
           + +N L                                  IKG   AG+ E+S  LL + 
Sbjct: 130 NCFNNLLTFVVGSSSFNQWWRFFNESKIKVDLDVYSFGIVIKGCCEAGEIEKSFDLL-VE 188

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            RE    PN+  Y  L+   C    I +A ++  +M   G+  +  TY  +     +NG 
Sbjct: 189 LREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGI 248

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
             Q  E+  +M+ +GV PN  T   +++ +CK+G+ K+A +    M+E GV  N+V +N 
Sbjct: 249 KKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNT 308

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           LI G    M  +  ++V+  MK   +NP++ITY+T+++ +   G + K   +  D+   G
Sbjct: 309 LIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRG 368

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           + P    Y+IL  G+ ++ +   A +++  M E G  P+ + +T +I  +    +M++AI
Sbjct: 369 LSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAI 428

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           ++   M E G++P++ T+  L+ G+    Q   A  + ++M A  + P K  +  +    
Sbjct: 429 QLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGY 488

Query: 504 RATGLTKEAKRILSKIKNKE 523
              G +  A R+  +++ KE
Sbjct: 489 CKEGSSYRALRLFREMEEKE 508



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 31/149 (20%), Positives = 72/149 (48%), Gaps = 1/149 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+++       ++A  + + + E G  P + TY+ L+    I+ + N    +   +
Sbjct: 410 TYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLM 469

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
               ++P+ + +N ++  + + G+   A+  F +M+E  L P  ++Y  +I+      K 
Sbjct: 470 VAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKS 529

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRA 222
           +E+  L++ M   G + P+    N++ RA
Sbjct: 530 KEAEGLVEKMIDTG-IDPSDSILNLISRA 557


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 242/464 (52%), Gaps = 8/464 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEG---GHKPSLVTYTTLLAALTI 119
           M + SC   V S T L+  L +  + QEA  + + + +G   G  P +V+YTT++     
Sbjct: 149 MTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFK 208

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
           +      +S   ++ +  + PD + ++++I A  +   M++AM+    M ++G+ P   T
Sbjct: 209 EGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRT 268

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREG----NVKPNLRTYNVLVRAWCNEKNITEAWNV 235
           Y +++ GY  +G+P+E++  L  +  +G     ++P++ TY  L++ +  +  +     +
Sbjct: 269 YTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHAL 328

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
           +  M  +G+ PD   YN +  AYA+ G+ D+A  V  +M   G+ P+  T G +I   CK
Sbjct: 329 LDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCK 388

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
            G++++A+ +   M + G+ P  +++N LI G       +  +E++  M +  +  + I 
Sbjct: 389 SGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF 448

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           +++I+++    G + + +++FD M + G+KPD   YS L  GY    + ++A +LL  M+
Sbjct: 449 FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMV 508

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G  PN V + T+I+G+C    M  A+ +F +M   GVSP++ T+  ++ G  + R+  
Sbjct: 509 SVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTA 568

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            A+E+   +   G   + ST+ ++        LT +A R+   +
Sbjct: 569 AAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNL 612



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/510 (24%), Positives = 237/510 (46%), Gaps = 41/510 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N   + G   +A + ++ +++    P +VTY++++AAL   +  +    +++
Sbjct: 196 VVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLT 255

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-----LTPTTSTYNTLIKG 186
            + +NG+ P+   + ++++ +  SG  +EA+    K++  G     L P  +TY TL++G
Sbjct: 256 SMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQG 315

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
           Y   G       LLDLM R G + P+   YN+L+ A+  +  + EA  V  KM   G+ P
Sbjct: 316 YATKGALVGMHALLDLMVRNG-IHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNP 374

Query: 247 DVVTYNTIATAYAQNGEAD-----------------------------------QAEEVI 271
           D VTY  +     ++G  +                                   +AEE+I
Sbjct: 375 DAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELI 434

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
           +EM   G+  N      II  +CKEG++ E+ +    M   GV P+++ ++ LI G+   
Sbjct: 435 LEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLA 494

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
              D   ++L+ M    + P+ +TY T++N +     M     +F +M  +G+ PD   Y
Sbjct: 495 GKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITY 554

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           +I+ +G  + +    A+EL + + ESG    +  +  I+ G C +   D A+ +F  +C 
Sbjct: 555 NIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCL 614

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
             +    +TF  ++    +  +   A+++     + G+ P   T+ L+AE     GL +E
Sbjct: 615 MDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEE 674

Query: 512 AKRILSKIKNKERTNEMEAEEDIPVESLER 541
             ++   +++   T +      I  E L+R
Sbjct: 675 LDQLFLSMEDNGCTVDSGMLNFIVRELLQR 704



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 110/488 (22%), Positives = 209/488 (42%), Gaps = 80/488 (16%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI--HSIMSQVEENGMDPDSIFFN 146
           ++A+ +F+ L+  G   S+      LA +       ++  ++ M++     + P    + 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 91

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I     +  ++        + + G      T+  L+KG     +  +++ ++     E
Sbjct: 92  ILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA---ASGMKPDVVTYNTIATAYAQNGE 263
            +  P++ +  +L++  C+E    EA  + H MA     G  PDVV+Y T+   + + G+
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 264 A-----------------------------------DQAEEVIVEMEHNGVQPNGRTCGI 288
           +                                   D+A EV+  M  NGV PN RT   
Sbjct: 212 SGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTS 271

Query: 289 IISGYCKEGKIKEALRFARTMKEYGV-----HPNLVIFNLLIKGF------------VEI 331
           I+ GYC  G+ KEA+ F + ++  GV      P++  +  L++G+            +++
Sbjct: 272 IMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDL 331

Query: 332 MDRDG--------------------VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
           M R+G                    VDE + +  + R   +NPD +TY  ++     +G 
Sbjct: 332 MVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGR 391

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           ++     F+ M   G+ P    Y+ L  G     + E+AEEL++ M++ G   N + F +
Sbjct: 392 VEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNS 451

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           II   C +G +  + ++FD M   GV P++ T+ TL+ GY  A +   A ++L  M + G
Sbjct: 452 IIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVG 511

Query: 489 VHPQKSTF 496
           + P   T+
Sbjct: 512 LKPNTVTY 519



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/357 (26%), Positives = 171/357 (47%), Gaps = 10/357 (2%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           L + G+ ++A   F  +I+ G  P  + Y +L+  L    ++     ++ ++ + G+  +
Sbjct: 386 LCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLN 445

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           +IFFN++I++  + G + E+   F  M   G+ P   TY+TLI GY +AGK +E++KLL 
Sbjct: 446 TIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLS 505

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M   G +KPN  TY  L+  +C    + +A  +  +M +SG+ PD++TYN I     Q 
Sbjct: 506 GMVSVG-LKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQT 564

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
                A+E+ V +  +G Q    T  II+ G CK     +ALR  + +    +      F
Sbjct: 565 RRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTF 624

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           N++I   +++  R+G  E   L   F  N   P+  TY  +       G +++  ++F  
Sbjct: 625 NIMIDALLKV-GRNG--EAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 681

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH---PNVVIFTTIISG 432
           M   G   D+   + + +  ++  E  +A   L  + E  F        +F  ++SG
Sbjct: 682 MEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSG 738



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 55/267 (20%), Positives = 132/267 (49%), Gaps = 1/267 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++  C        +++S  + G+  E++ +F+ ++  G KP ++TY+TL+    +  + 
Sbjct: 438 LDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKM 497

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    ++S +   G+ P+++ +  +IN + +   M +A+  F +M+ SG++P   TYN +
Sbjct: 498 DEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNII 557

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++G     +   + K L +   E   +  L TYN+++   C  K   +A  +   +    
Sbjct: 558 LQGL-FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMD 616

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           +K +  T+N +  A  + G   +A+++ V    NG+ PN  T  ++      +G ++E  
Sbjct: 617 LKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELD 676

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +   +M++ G   +  + N +++  ++
Sbjct: 677 QLFLSMEDNGCTVDSGMLNFIVRELLQ 703



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 12/184 (6%)

Query: 345 KEFRVNPDVITYSTIMNAWS----TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           K FRV  + IT++ ++        T+  MD    +   M +    PD  + +IL KG   
Sbjct: 116 KGFRV--EAITFTPLLKGLCADKRTSDAMDI---VLRRMTELSCMPDVFSCTILLKGLCD 170

Query: 401 EQEPEKAEELLMTMIES---GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           E   ++A EL   M +    G  P+VV +TT+I+G+  +G   +A   + +M +  +SP+
Sbjct: 171 ENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPD 230

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + T+ +++    + +   +A E+L  M   GV P   T+  +     ++G  KEA   L 
Sbjct: 231 VVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLK 290

Query: 518 KIKN 521
           K+++
Sbjct: 291 KVRS 294


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 211/424 (49%), Gaps = 1/424 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L  + K  +A  +F+ + + G  PSL+TYTT++  L       +   ++ ++EE G
Sbjct: 147 LLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKG 206

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + +N VI++  +     EAM  F +M + G+ P   TY++++ G+   G+  E+ 
Sbjct: 207 CKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEAT 266

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M    NV PN  T+ +LV   C E  I EA  V   M  +G++PD  TY+ +   
Sbjct: 267 SLFKQMIGR-NVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDG 325

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y    + D+A+++   M   G  P+ R   I+I+G+CK  ++ EA      M +  + P+
Sbjct: 326 YCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPD 385

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V ++ L++GF +        ++   M  + + PD ITYS +++     G +D+   +  
Sbjct: 386 TVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLK 445

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M ++ I+P    Y+IL +G     + E A EL   +   G  P+VV +T +ISG   +G
Sbjct: 446 AMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEG 505

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
             + A E+F KM  +G  PN  T+   + G+     P  A  +++ M   G     STF 
Sbjct: 506 LSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSSTFQ 565

Query: 498 LLAE 501
           +L +
Sbjct: 566 MLLD 569



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 197/379 (51%), Gaps = 2/379 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C+  V +   +++SL +  +  EA   F+ +++ G  P++VTY+++L       +
Sbjct: 202 MEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQ 261

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            N   S+  Q+    + P+++ F  +++   + G + EA   F  M E+G+ P   TY+ 
Sbjct: 262 LNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSA 321

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ GY +  + +E+ KL D+M  +G   P++R YN+L+   C  + + EA  ++ +M   
Sbjct: 322 LMDGYCLQSQMDEAQKLFDIMVGKG-FAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDR 380

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            + PD VTY+T+   + Q G    A+++  EM   G+ P+  T  I++ G CK G + EA
Sbjct: 381 DLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEA 440

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
            R  + M+E  + P++ I+N+LI+G       +   E+ + +    + P V+TY+ +++ 
Sbjct: 441 FRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISG 500

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G  ++  E+F  M   G  P++  Y++  +G++R  +P  A  L+  M+  GF  +
Sbjct: 501 LLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSAD 560

Query: 423 VVIFTTIISGWCSDGSMDR 441
              F  ++    +D  + R
Sbjct: 561 SSTFQMLLDLESNDEIISR 579



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 213/450 (47%), Gaps = 3/450 (0%)

Query: 72  VRSMTKLMNSLIE--RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           V ++T L+N L    R     A +    + + G +P+ VT+ TLL  L  + +      +
Sbjct: 104 VYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKL 163

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ + G  P  I +  +I    + G+   A+    KM+E G  P    YNT+I     
Sbjct: 164 FDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCK 223

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
             +  E++     M  +G + PN+ TY+ ++  +CN   + EA ++  +M    + P+ V
Sbjct: 224 DRRANEAMYFFSEMVDQG-IPPNVVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTV 282

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           T+  +     + G   +A  V   M  NGV+P+  T   ++ GYC + ++ EA +    M
Sbjct: 283 TFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIM 342

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G  P++ ++N+LI G  +    +    +L+ M +  + PD +TYST+M  +  AG  
Sbjct: 343 VGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRP 402

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
              +++F +M   G+ PD+  YSIL  G  +    ++A  LL  M ES   P++ I+  +
Sbjct: 403 QVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKAMQESKIEPHICIYNIL 462

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G C+ G ++ A E+F  +   G+ P++ T+  ++ G  +      A E+ + M   G 
Sbjct: 463 IQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGLSNEACEMFRKMVVNGC 522

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            P   T+ +  +     G    A R++ ++
Sbjct: 523 LPNSCTYNVAIQGFLRNGDPSNAVRLIEEM 552



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 207/433 (47%), Gaps = 38/433 (8%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A A FN L+     P +V +  LL +L  +K ++++ S+  Q++ + + P+      +I
Sbjct: 52  DAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILI 111

Query: 150 NAFSESG--NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
           N    S   ++  A     KM + GL PT  T+ TL+ G                     
Sbjct: 112 NCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTLLNG--------------------- 150

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
                           C++  I +A  +  ++   G  P ++TY TI     + G    A
Sbjct: 151 ---------------LCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNA 195

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
            +++ +ME  G +P+      +I   CK+ +  EA+ F   M + G+ PN+V ++ ++ G
Sbjct: 196 LQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHG 255

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           F  +   +    +   M    V P+ +T++ +++     G + + + +F+ M + G++PD
Sbjct: 256 FCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPD 315

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
           A+ YS L  GY  + + ++A++L   M+  GF P+V ++  +I+G C    ++ A  +  
Sbjct: 316 AYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLS 375

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           +M +  ++P+  T+ TLM G+ +A +P  A+++ + M ++G+ P   T+ +L +     G
Sbjct: 376 EMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHG 435

Query: 508 LTKEAKRILSKIK 520
              EA R+L  ++
Sbjct: 436 HLDEAFRLLKAMQ 448



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 152/317 (47%), Gaps = 2/317 (0%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI--ATAYAQNGEADQAE 268
           P +  +N L+ +   +K+ +   ++  +M  S ++P+V T   +     ++       A 
Sbjct: 67  PPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAF 126

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
             + +M   G+QP   T G +++G C + KI +A++    + + G  P+L+ +  +IKG 
Sbjct: 127 SALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGL 186

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +I       ++L  M+E    PDV+ Y+T++++       ++    F +M   GI P+ 
Sbjct: 187 CKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNV 246

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             YS +  G+    +  +A  L   MI     PN V FT ++ G C +G +  A  VF+ 
Sbjct: 247 VTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEM 306

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M E+GV P+  T+  LM GY    Q   A+++  IM   G  P    + +L      +  
Sbjct: 307 MTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRR 366

Query: 509 TKEAKRILSKIKNKERT 525
             EAK +LS++ +++ T
Sbjct: 367 LNEAKTLLSEMYDRDLT 383


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 222/452 (49%), Gaps = 14/452 (3%)

Query: 69  CR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           CR  V + T LMN L   G+  EA A+ + ++E G +P  +TY T +  +       S  
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 128 SIMSQVEE-NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
           +++ ++EE + + P+ + ++A+I+   + G   ++ + F +M++ G+ P   TYN +I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
           + I+G+   + +LL  M  E  + PN+ TYN L+ A+  E    EA  +  +M   G+ P
Sbjct: 298 FCISGRWSAAQRLLQEM-LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           + +TYN++   + +    D AE++   M   G  P+  T   +I GYC   +I + +   
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             M   G+  N V +N LI GF  + D +   ++   M    V PD++T +T+++     
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476

Query: 367 GFMDKCKEIFDDMGKA-----------GIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           G +    E+F  M K+           G++PD   Y+IL  G + E +  +AEEL   M 
Sbjct: 477 GKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMP 536

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G  P+ + ++++I G C    +D A ++F  M     SPN+ TF TL+ GY +A +  
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVD 596

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
              E+   M   G+      ++ L    R  G
Sbjct: 597 DGLELFCEMGRRGIVADAIIYITLIYGFRKVG 628



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 215/418 (51%), Gaps = 12/418 (2%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +++ L + G+  ++  +F  + + G  P++VTY  ++    I  R+++   ++ ++ E
Sbjct: 257 SAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLE 316

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + P+ + +NA+INAF + G   EA + + +M   G+ P T TYN++I G+    + + 
Sbjct: 317 RKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDA 376

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  +  LM+ +G   P++ T+  L+  +C  K I +   ++H+M   G+  + VTYNT+ 
Sbjct: 377 AEDMFYLMATKG-CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY--- 312
             +   G+ + A ++  +M  +GV P+  TC  ++ G C  GK+K+AL   + M++    
Sbjct: 436 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495

Query: 313 --------GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
                   GV P+++ +N+LI G +        +E+   M    + PD ITYS++++   
Sbjct: 496 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
               +D+  ++F  MG     P+   ++ L  GY +    +   EL   M   G   + +
Sbjct: 556 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           I+ T+I G+   G+++ A+++F +M   GV P+  T   ++ G+    +  RA  +L+
Sbjct: 616 IYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLE 673



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 214/453 (47%), Gaps = 20/453 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S T L+       K   A + F  L + G  P +VT+TTLL  L +  R +    +  
Sbjct: 116 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFH 175

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+      PD + F  ++N     G + EA+    +M E+GL P   TY T + G    G
Sbjct: 176 QICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMG 231

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++ LL  M    ++KPN+  Y+ ++   C +   +++ N+  +M   G+ P++VTY
Sbjct: 232 DTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTY 291

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   +  +G    A+ ++ EM    + PN  T   +I+ + KEGK  EA      M  
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN + +N +I GF +    D  +++  LM     +PDV T++T+++ +  A  +D 
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+  +M + G+  +   Y+ L  G+    +   A +L   MI SG  P++V   T++ 
Sbjct: 412 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 471

Query: 432 GWCSDGSMDRAIEVFDKMCE-----------HGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           G C +G +  A+E+F  M +           +GV P++ T+  L+ G     +   AEE+
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 531

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            + M   G+ P   T+     +    GL K+++
Sbjct: 532 YEEMPHRGIVPDTITY-----SSMIDGLCKQSR 559



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 223/453 (49%), Gaps = 10/453 (2%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           ++A  +F++++     PS++ +  L+ A+   +R + + S+  ++E   +  D   F  +
Sbjct: 63  EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           I  F     +  A+ TF K+ + GL P   T+ TL+ G  +  +  E++ L   + R   
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR--- 179

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
             P++ T+  L+   C E  + EA  ++ +M  +G++PD +TY T      + G+   A 
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 269 EVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
            ++ +ME  + ++PN      II G CK+G+  ++      M++ G+ PN+V +N +I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           F           +L  M E +++P+V+TY+ ++NA+   G   +  E++D+M   GI P+
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ +  G+ ++   + AE++   M   G  P+V  FTT+I G+C    +D  +E+  
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           +M   G+  N  T+ TL+ G+        A ++ Q M + GV P   T   L +     G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 508 LTKEAKRILSKIKNKERTNEMEAEEDIPVESLE 540
             K+A  +   ++     ++M+ +   P   +E
Sbjct: 478 KLKDALEMFKAMQK----SKMDLDASHPFNGVE 506



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/375 (28%), Positives = 191/375 (50%), Gaps = 12/375 (3%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+   AQ +   ++E    P++VTY  L+ A   + +F     +  ++   G+ P++I +
Sbjct: 302 GRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITY 361

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N++I+ F +   ++ A D F+ M   G +P   T+ TLI GY  A + ++ ++LL  M R
Sbjct: 362 NSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPR 421

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G V  N  TYN L+  +C   ++  A ++  +M +SG+ PD+VT NT+      NG+  
Sbjct: 422 RGLV-ANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLK 480

Query: 266 QAEEVIVEME-----------HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
            A E+   M+            NGV+P+  T  I+I G   EGK  EA      M   G+
Sbjct: 481 DALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGI 540

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P+ + ++ +I G  +    D   ++   M     +P+V+T++T++N +  AG +D   E
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLE 600

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +F +MG+ GI  DA  Y  L  G+ +      A ++   MI SG +P+ +    +++G+ 
Sbjct: 601 LFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFW 660

Query: 435 SDGSMDRAIEVFDKM 449
           S   ++RA+ + + +
Sbjct: 661 SKEELERAVAMLEDL 675



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 196/416 (47%), Gaps = 6/416 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V    KLM +++   +P    +++  +     +  + ++T L+       +     S  
Sbjct: 80  SVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 139

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G+ PD + F  +++       + EA+D F ++      P   T+ TL+ G    
Sbjct: 140 GKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCRE 195

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM-AASGMKPDVV 249
           G+  E+V LLD M   G ++P+  TY   V   C   +   A N++ KM   S +KP+VV
Sbjct: 196 GRVVEAVALLDRMVENG-LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y+ I     ++G    +  + +EM+  G+ PN  T   +I G+C  G+   A R  + M
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            E  + PN+V +N LI  FV+        E+   M    + P+ ITY+++++ +     +
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D  +++F  M   G  PD   ++ L  GY   +  +   ELL  M   G   N V + T+
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 434

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           I G+C  G ++ A+++  +M   GV P++ T  TL+ G  +  +   A E+ + M+
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/218 (23%), Positives = 107/218 (49%), Gaps = 12/218 (5%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNL------IEGGH-----KPSLVTYTTLLAAL 117
           C  + +   L++ L + GK ++A  +F  +      ++  H     +P ++TY  L+  L
Sbjct: 460 CPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGL 519

Query: 118 TIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT 177
             + +F     +  ++   G+ PD+I ++++I+   +   ++EA   F  M     +P  
Sbjct: 520 INEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNV 579

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
            T+NTLI GY  AG+ ++ ++L   M R G V   +  Y  L+  +    NI  A ++  
Sbjct: 580 VTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI-IYITLIYGFRKVGNINGALDIFQ 638

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           +M +SG+ PD +T   + T +    E ++A  ++ +++
Sbjct: 639 EMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQ 676


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 218/445 (48%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L+E  K +  +++++ +   G KP +VT+ TL+ AL    +  +   ++ ++   G
Sbjct: 152 LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRG 211

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   F  ++  F E G++E A+    +M E G + T  T N LI GY   G+ E+++
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 271

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             +     +G  +P+  TYN  V   C   ++  A  VM  M   G  PDV TYN +   
Sbjct: 272 GYIQQEIADG-FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 330

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +NG+ ++A+ ++ +M   G  P+  T   +I+  C   +++EAL  AR +   GV P+
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  FN+LI    ++ D      +   MK     PD +TY+T+++   + G + K  ++  
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM   G       Y+ +  G  ++   E+AEE+   M   G   N + F T+I G C D 
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D A E+ ++M   G+ PN  T+ +++  Y +     +A +IL+ M A G      T+ 
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 570

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L       G T+ A ++L  ++ K
Sbjct: 571 TLINGLCKAGRTQVALKVLRGMRIK 595



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 209/450 (46%), Gaps = 2/450 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T LM   +E G  + A  +   ++E G   + VT   L+       R       + Q 
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G +PD I +N  +N   ++ ++  A+     M + G  P   TYN ++      G+ 
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 337

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           EE+  +L+ M   G + P++ T+N L+ A C    + EA ++  ++   G+ PDV T+N 
Sbjct: 338 EEAKGILNQMVDRGCL-PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A  + G+   A  +  EM+++G  P+  T   +I   C  GK+ +AL   + M+  G
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              + + +N +I G  + M  +  +EV   M    ++ + IT++T+++       +D   
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+ + M   G++P+   Y+ +   Y ++ + +KA ++L TM  +GF  +VV + T+I+G 
Sbjct: 517 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G    A++V   M   G+ P  K +  ++           A  + + M   G  P  
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 494 STFLLLAEAR-RATGLTKEAKRILSKIKNK 522
            T+ ++     R  G  KEA   + ++ +K
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/356 (21%), Positives = 152/356 (42%), Gaps = 3/356 (0%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           +      P    Y  +I+  G  G  +    L+  M REG+ +  L   +  + ++  ++
Sbjct: 65  LARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGH-QVKLGVVHSFLDSYEGQQ 123

Query: 228 NITEAWNVMHKMAAS--GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
              +A +++        G++ D V YN +     +  +    E V  EM   G++P+  T
Sbjct: 124 LFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVT 183

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
              ++   C+  +++ A+     M   GV P+   F  L++GFVE    +    V A M 
Sbjct: 184 FNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML 243

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           E   +   +T + ++N +   G ++            G +PD   Y+    G  +     
Sbjct: 244 EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG 303

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
            A +++  M++ G  P+V  +  +++  C +G ++ A  + ++M + G  P++ TF TL+
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
                  +   A ++ + +   GV P   TF +L  A    G    A R+  ++KN
Sbjct: 364 AALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 38/270 (14%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M    C R+  +   +++ L ++ + +EA+ +F+ +   G   + +T+ TL+  L   K+
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    +++Q+   G+ P++I +N+++  + + G++++A D    M  +G      TY T
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G   AG+ + ++K+L  M  +G ++P  + YN ++++     NI +A ++  +MA  
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKG-MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 630

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK-EGKIKE 301
           G  PD +TY                                    I+  G C+  G IKE
Sbjct: 631 GEPPDALTYK-----------------------------------IVFRGLCRGGGPIKE 655

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
           A  F   M + G  P    F +L +G + +
Sbjct: 656 AFDFMLEMVDKGFIPEFSSFRMLAEGLLNL 685



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 121/286 (42%), Gaps = 2/286 (0%)

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           +A     P    Y  I       G  D  + ++ EM   G Q         +  Y  +  
Sbjct: 65  LARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQL 124

Query: 299 IKEALRFARTMKE--YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
             +A+       +  +G+  + V++N L+   VE      ++ V + M    + PDV+T+
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           +T+M A   A  +     + ++M   G+ PD   ++ L +G+V E   E A  +   M+E
Sbjct: 185 NTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G     V    +I+G+C  G ++ A+    +    G  P+  T+ T + G  +      
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           A +++ +M   G  P   T+ ++       G  +EAK IL+++ ++
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 226/447 (50%), Gaps = 16/447 (3%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+ IF  ++E G  P++ TY  L+                 ++E NG  P+ + +N +I+
Sbjct: 187 AEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIID 246

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           A+ +   + EA      M   GL P   +YN +I G    G+ +E+ ++L+ MS+   V 
Sbjct: 247 AYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYV- 305

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P+  T+N L+  +CN  N  +A  +  +M  +G+ P+VVTY T+  +  + G  ++A E 
Sbjct: 306 PDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEF 365

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + +M   G+ PNGRT   +I G+ ++G +K+A +  + M E G  P ++ +N LI G   
Sbjct: 366 LDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCI 425

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           +   +    +L  M E    PDV++YSTI++ +     ++K  ++  +M   GI PD   
Sbjct: 426 LGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVAT 485

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YS L +G  +++   +  +L   M+  G  P+ V +T++I+ +C +G +D+A+ + D+M 
Sbjct: 486 YSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMI 545

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-------------- 496
           + G SP++ T+  L+ G+++  +   A+ +L  +      P + T+              
Sbjct: 546 QKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKS 605

Query: 497 -LLLAEARRATGLTKEAKRILSKIKNK 522
            L L +     GL  EA R+L  +  K
Sbjct: 606 ALALMKGFCMKGLMNEADRVLESMLQK 632



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 136/485 (28%), Positives = 247/485 (50%), Gaps = 26/485 (5%)

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESG-NMEEAMDTFWKMKESGLTPTTSTYNT 182
           N   SI++  +  G  P  + +NA+++A   +  +++ A   F +M ESG++P   TYN 
Sbjct: 149 NKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIAEGIFKEMVESGVSPNVYTYNI 208

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI+G+  AG  E  +     M R G + PN+ TYN ++ A+C  + I EA+ ++  MA  
Sbjct: 209 LIRGFCTAGNLEMGLFFFGEMERNGCL-PNVVTYNTIIDAYCKLRKIGEAFKLLRLMALK 267

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P++++YN +     + G+  +  E++ EM      P+  T   +I+GYC  G   +A
Sbjct: 268 GLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQA 327

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L     M + G+ PN+V +  LI    +  + +   E L  M++  ++P+  TY+T+++ 
Sbjct: 328 LVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDG 387

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +S  GF+ +  +I  +M + G  P    Y+ L  G+      E A  LL  MIE GF P+
Sbjct: 388 FSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPD 447

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           VV ++TIISG+C +  +++A ++  +M   G+SP++ T+ +L+ G  + R+     ++ Q
Sbjct: 448 VVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQ 507

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
            M + G+ P + T+  L  A    G   +A R+  ++  K  + ++     +    L   
Sbjct: 508 EMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDI-----VTYNVLING 562

Query: 543 YHKEATTASYPNLL-------QIPNVVSSD---------QKGSAAALKKG---RMLLRDA 583
           ++K++ T     LL        +PN ++ +         +  SA AL KG   + L+ +A
Sbjct: 563 FNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEA 622

Query: 584 DSSLE 588
           D  LE
Sbjct: 623 DRVLE 627



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 228/480 (47%), Gaps = 17/480 (3%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C   V +   ++++  +  K  EA  +   +   G  P+L++Y  ++  L  + +
Sbjct: 229 MERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQ 288

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 I+ ++ +    PD + FN +IN +   GN  +A+    +M ++GL+P   TY T
Sbjct: 289 MKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTT 348

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI     AG    +++ LD M R+  + PN RTY  L+  +  +  + +A+ +M +M  +
Sbjct: 349 LINSMCKAGNLNRAMEFLDQM-RDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVEN 407

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P ++TYN +   +   G  + A  ++ EM   G  P+  +   IISG+C+  ++++A
Sbjct: 408 GFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKA 467

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
            +    M   G+ P++  ++ LI+G  +      V ++   M    + PD +TY++++NA
Sbjct: 468 FQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINA 527

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +   G +DK   + D+M + G  PD   Y++L  G+ ++   ++A+ LL+ ++     PN
Sbjct: 528 YCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPN 587

Query: 423 VVIFTTIIS---------------GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            + + T+I                G+C  G M+ A  V + M + G   N + +  ++ G
Sbjct: 588 EITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHG 647

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNE 527
           +S+     +A  + + M   G  P   T + LA++    G   E  ++L       R  E
Sbjct: 648 HSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITE 707



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 110/402 (27%), Positives = 190/402 (47%), Gaps = 20/402 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+NS+ + G    A    + + + G  P+  TYTTL+   + Q      + IM 
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ ENG  P  I +NA+IN     G ME+A     +M E G  P   +Y+T+I G+    
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E++ +L   M  +G + P++ TY+ L++  C ++ + E  ++  +M + G+ PD VTY
Sbjct: 463 ELEKAFQLKVEMVAKG-ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTY 521

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++  AY   G+ D+A  +  EM   G  P+  T  ++I+G+ K+ + KEA R    +  
Sbjct: 522 TSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLY 581

Query: 312 YGVHPNLVIFNLLI---------------KGFVEIMDRDGVDEVL--ALMKEFRVNPDVI 354
               PN + +N LI               KGF      +  D VL   L K +++N +V 
Sbjct: 582 EESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEV- 640

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
            Y+ I++  S  G ++K   ++ +M  +G  P +     LAK    E +  +  +LL   
Sbjct: 641 -YNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYT 699

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           ++S       +   +I     +G+MD    V   M   G+ P
Sbjct: 700 LKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDMALSGLLP 741



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/336 (23%), Positives = 149/336 (44%), Gaps = 18/336 (5%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L+N     G+ ++A  +   +IE G  P +V+Y+T+++     +       + 
Sbjct: 412 TIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLK 471

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+ PD   ++++I    +   + E  D F +M   GL P   TY +LI  Y I 
Sbjct: 472 VEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIE 531

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +++++L D M ++G   P++ TYNVL+  +  +    EA  ++ K+      P+ +T
Sbjct: 532 GDLDKALRLHDEMIQKG-FSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEIT 590

Query: 251 YNT---------------IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
           YNT               +   +   G  ++A+ V+  M   G + N     +II G+ K
Sbjct: 591 YNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSK 650

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL-MKEFRVNPDVI 354
            G I++A    + M   G  P+ V    L K          ++++L   +K  R+    +
Sbjct: 651 VGNIEKAYNLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQLLDYTLKSCRITEAAL 710

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
               ++   S  G MD    +  DM  +G+ P + A
Sbjct: 711 A-KVLIGINSKEGNMDAVFNVLKDMALSGLLPYSSA 745


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 218/445 (48%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L+E  K +  +++++ +   G KP +VT+ TL+ AL    +  +   ++ ++   G
Sbjct: 152 LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 211

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   F  ++  F E G++E A+    +M E G + T  T N LI GY   G+ E+++
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 271

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             +     +G  +P+  TYN  V   C   ++  A  VM  M   G  PDV TYN +   
Sbjct: 272 GYIQQEIADG-FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 330

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +NG+ ++A+ ++ +M   G  P+  T   +I+  C   +++EAL  AR +   GV P+
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  FN+LI    ++ D      +   MK     PD +TY+T+++   + G + K  ++  
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM   G       Y+ +  G  ++   E+AEE+   M   G   N + F T+I G C D 
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D A E+ ++M   G+ PN  T+ +++  Y +     +A +IL+ M A G      T+ 
Sbjct: 511 KIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 570

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L       G T+ A ++L  ++ K
Sbjct: 571 TLINGLCKAGRTQVALKVLRGMRIK 595



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 209/450 (46%), Gaps = 2/450 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T LM   +E G  + A  +   ++E G   + VT   L+       R       + Q 
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G +PD I +N  +N   ++ ++  A+     M + G  P   TYN ++      G+ 
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 337

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           EE+  +L+ M   G + P++ T+N L+ A C    + EA ++  ++   G+ PDV T+N 
Sbjct: 338 EEAKGILNQMVDRGCL-PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A  + G+   A  +  EM+++G  P+  T   +I   C  GK+ +AL   + M+  G
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              + + +N +I G  + M  +  +EV   M    ++ + IT++T+++       +D   
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+ + M   G++P+   Y+ +   Y ++ + +KA ++L TM  +GF  +VV + T+I+G 
Sbjct: 517 ELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G    A++V   M   G+ P  K +  ++           A  + + M   G  P  
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 494 STFLLLAEAR-RATGLTKEAKRILSKIKNK 522
            T+ ++     R  G  KEA   + ++ +K
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/356 (21%), Positives = 152/356 (42%), Gaps = 3/356 (0%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           +      P    Y  +I+  G  G  +    L+  M REG+ +  L   +  + ++  ++
Sbjct: 65  LARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGH-QVKLGVVHSFLDSYEGQQ 123

Query: 228 NITEAWNVMHKMAAS--GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
              +A +++        G++ D V YN +     +  +    E V  EM   G++P+  T
Sbjct: 124 LFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVT 183

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
              ++   C+  +++ A+     M   GV P+   F  L++GFVE    +    V A M 
Sbjct: 184 FNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML 243

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           E   +   +T + ++N +   G ++            G +PD   Y+    G  +     
Sbjct: 244 EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG 303

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
            A +++  M++ G  P+V  +  +++  C +G ++ A  + ++M + G  P++ TF TL+
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
                  +   A ++ + +   GV P   TF +L  A    G    A R+  ++KN
Sbjct: 364 AALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 38/270 (14%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M    C R+  +   +++ L ++ + +EA+ +F+ +   G   + +T+ TL+  L   K+
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    +++Q+   G+ P++I +N+++  + + G++++A D    M  +G      TY T
Sbjct: 512 IDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G   AG+ + ++K+L  M  +G ++P  + YN ++++     NI +A ++  +MA  
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKG-MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 630

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK-EGKIKE 301
           G  PD +TY                                    I+  G C+  G IKE
Sbjct: 631 GEPPDALTYK-----------------------------------IVFRGLCRGGGPIKE 655

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
           A  F   M + G  P    F +L +G + +
Sbjct: 656 AFDFMLEMVDKGFIPEFSSFRMLAEGLLNL 685



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 121/286 (42%), Gaps = 2/286 (0%)

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           +A     P    Y  I       G  D  + ++ EM   G Q         +  Y  +  
Sbjct: 65  LARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQL 124

Query: 299 IKEALRFARTMKE--YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
             +A+       +  +G+  + V++N L+   VE      ++ V + M    + PDV+T+
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           +T+M A   A  +     + ++M   G+ PD   ++ L +G+V E   E A  +   M+E
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G     V    +I+G+C  G ++ A+    +    G  P+  T+ T + G  +      
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           A +++ +M   G  P   T+ ++       G  +EAK IL+++ ++
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  215 bits (547), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 227/478 (47%), Gaps = 40/478 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N++   G   EA  I ++L   G KP  VTYT +L +L   +R+  +  + +++  N 
Sbjct: 238 LINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNK 297

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + FN ++ +  + G ++ A+     M E G  P   TY++++ G    G+ +++V
Sbjct: 298 CAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAV 357

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL  +   G  KP+   Y  +++  C+ +    A  +M +M  S   PD VT+NT+  +
Sbjct: 358 ELLSRLKSYG-CKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIAS 416

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             Q G  D+A +V+ +M  NG  P+  T   II G C E  I +A+     ++ YG  P+
Sbjct: 417 LCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPD 476

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V FN L+KG   +   +  ++++  M      PD  T++T++ +    G + +  E   
Sbjct: 477 IVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLK 536

Query: 378 DMGKAGIKPDAHAYSILAKGYVRE---QEP------------------------------ 404
            M + G  P+   Y+I+    ++    QE                               
Sbjct: 537 IMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNGTPDLITYNTVISNITKAGKM 596

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           E+A +LL  M+ +G  P+ + + ++  G C +   DRAI +  ++ + G+SP+   +  +
Sbjct: 597 EEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDI 656

Query: 465 MWGYSEARQPWRAE---EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           + G+    Q WR +   +    M + G  P +ST+++L EA     L  EAK++L  +
Sbjct: 657 LLGFC---QNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNL 711



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 130/479 (27%), Positives = 225/479 (46%), Gaps = 42/479 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L   G+  +A+ +F  L   G   ++VTY T++       R      ++S +    
Sbjct: 104 LIKRLCSGGRVADAERVFATL---GASATVVTYNTMVNGYCRAGRIEDARRLISGMP--- 157

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD+  FN +I A    G + +A+  F  M   G +P+  TY+ L+     A    +++
Sbjct: 158 FPPDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQAM 217

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY------ 251
            LLD M  +G  +P++ TYNVL+ A CNE ++ EA N++  + + G KPD VTY      
Sbjct: 218 VLLDEMRAKG-CEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKS 276

Query: 252 -----------------------------NTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
                                        NTI T+  Q G  D+A +V+  M  +G  P+
Sbjct: 277 LCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPD 336

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   I+ G C  G++ +A+     +K YG  P+ + +  ++KG   I   +  +E++A
Sbjct: 337 IVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMA 396

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M      PD +T++T++ +    G +D+  ++ + M + G  PD   Y+ +  G   E+
Sbjct: 397 EMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNER 456

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             + A ELL  +   G  P++V F T++ G CS    + A ++   M      P+  TF 
Sbjct: 457 CIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFN 516

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           T++    +     +A E L+IM   G  P +ST+ ++ +A    G T+EA ++LS + N
Sbjct: 517 TVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTN 575



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 207/423 (48%), Gaps = 12/423 (2%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPS-----LVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + SLI+R +  +A A+ +++  GG         +V    L+  L    R      + + +
Sbjct: 65  LRSLIQREEIDDALALVDSIASGGGSGKCLPLPVVPCNILIKRLCSGGRVADAERVFATL 124

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G     + +N ++N +  +G +E+A      M      P T T+N LI+   + G+ 
Sbjct: 125 ---GASATVVTYNTMVNGYCRAGRIEDARRLISGMP---FPPDTFTFNPLIRALCVRGRV 178

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            +++ + D M   G   P++ TY++L+ A C      +A  ++ +M A G +PD+VTYN 
Sbjct: 179 PDALAVFDDMLHRG-CSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNV 237

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A    G+ D+A  ++ ++  +G +P+  T   ++   C   + KE       M    
Sbjct: 238 LINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNK 297

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P+ V FN ++    +    D   +V+  M E    PD++TYS+I++     G +D   
Sbjct: 298 CAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAV 357

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+   +   G KPD  AY+ + KG    ++ E AEEL+  M+ S   P+ V F T+I+  
Sbjct: 358 ELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASL 417

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G +DRAI+V ++M E+G +P++ T+ +++ G    R    A E+L  ++++G  P  
Sbjct: 418 CQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDI 477

Query: 494 STF 496
            TF
Sbjct: 478 VTF 480



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 206/412 (50%), Gaps = 3/412 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ SL ++G    A  + +++ E G  P +VTY+++L  L    R +    ++S+++  G
Sbjct: 308 IVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 367

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD+I +  V+         E A +   +M  S   P   T+NT+I      G  + ++
Sbjct: 368 CKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAI 427

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+++ MS  G   P++ TYN ++   CNE+ I +A  ++  + + G KPD+VT+NT+   
Sbjct: 428 KVVEQMSENG-CNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKG 486

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                  + AE+++V M H+   P+  T   +I+  C++G + +A+   + M E G  PN
Sbjct: 487 LCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPN 546

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +N+++   ++        ++L+ M      PD+ITY+T+++  + AG M++  ++  
Sbjct: 547 QSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLR 604

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G+ PD   Y  LA G  RE   ++A  +L  + + G  P+   +  I+ G+C + 
Sbjct: 605 VMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNW 664

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             D AI+ F  M   G  P+  T+  L+   +       A+++L  + + GV
Sbjct: 665 RTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGV 716



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 182/383 (47%), Gaps = 3/383 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + + +++ L + G+  +A  + + L   G KP  + YTT+L  L   +++     +M+
Sbjct: 337 IVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELMA 396

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +   PD + FN VI +  + G ++ A+    +M E+G  P   TYN++I G     
Sbjct: 397 EMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNER 456

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +++++LL  +   G  KP++ T+N L++  C+     +A  +M  M  S   PD  T+
Sbjct: 457 CIDDAMELLSNLQSYG-CKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTF 515

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+ T+  Q G   QA E +  M  NG  PN  T  I++    K GK +EAL+    M  
Sbjct: 516 NTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTN 575

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
               P+L+ +N +I    +    +   ++L +M    ++PD ITY ++          D+
Sbjct: 576 G--TPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDR 633

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +   +   G+ PDA  Y+ +  G+ +    + A +    M+ SG  P+   +  ++ 
Sbjct: 634 AIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLE 693

Query: 432 GWCSDGSMDRAIEVFDKMCEHGV 454
               +  +D A ++   +C  GV
Sbjct: 694 ALAYECLLDEAKQLLVNLCSLGV 716



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 151/325 (46%), Gaps = 8/325 (2%)

Query: 60  CSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           CS C   E      +   ++ SL ++G    A  +   + E G  P +VTY +++  L  
Sbjct: 400 CSDCPPDEV-----TFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCN 454

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
           ++  +    ++S ++  G  PD + FN ++         E+A      M  S   P  +T
Sbjct: 455 ERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATT 514

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           +NT+I      G   ++++ L +M+  G + PN  TYN++V A        EA  ++  M
Sbjct: 515 FNTVITSLCQKGLLLQAIETLKIMAENGCI-PNQSTYNIVVDALLKAGKTQEALKLLSGM 573

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
             +   PD++TYNT+ +   + G+ ++A +++  M  NG+ P+  T   +  G C+E   
Sbjct: 574 --TNGTPDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLAYGICREDGT 631

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
             A+R    +++ G+ P+   +N ++ GF +    D   +  A M      PD  TY  +
Sbjct: 632 DRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIIL 691

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGI 384
           + A +    +D+ K++  ++   G+
Sbjct: 692 LEALAYECLLDEAKQLLVNLCSLGV 716


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 234/451 (51%), Gaps = 2/451 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R +    +L + L++  K  +A  +F ++I     P+++ ++ L +A+   K+++ + ++
Sbjct: 150 RNLSYRERLRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLAL 208

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             Q+E  G+  +    + +IN F     +  A     K+ + G  P T T++TLI G  +
Sbjct: 209 CKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCL 268

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+  E+++L+D M   G+ KP+L T N LV   C      EA  ++ KM   G +P+ V
Sbjct: 269 EGRVSEALELVDRMVEMGH-KPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAV 327

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +     ++G+   A E++ +ME   ++ +     III G CK G +  A      M
Sbjct: 328 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEM 387

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +  G+  N++ +N+LI GF      D   ++L  M + ++NP+V+T+S +++++   G +
Sbjct: 388 EMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKL 447

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            + +E+  +M   GI PD   Y+ L  G+ +E   +KA +++  M+  G  PN+  F  +
Sbjct: 448 REAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNIL 507

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I+G+C    +D  +E+F KM   GV  +  T+ TL+ G+ E  +   A+E+ Q M +  V
Sbjct: 508 INGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 567

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            P   T+ +L +     G +++A  I  KI+
Sbjct: 568 PPNIVTYKILLDGLCDNGESEKALEIFEKIE 598



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 236/466 (50%), Gaps = 8/466 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+N L   GK  EA  + + ++E G +P+ VTY  +L  +    +      ++ ++
Sbjct: 293 TINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKM 352

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           EE  +  D++ ++ +I+   + G+++ A + F +M+  G+T    TYN LI G+  AG+ 
Sbjct: 353 EERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRW 412

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
           ++  KLL D++ R+  + PN+ T++VL+ ++  E  + EA  +  +M   G+ PD +TY 
Sbjct: 413 DDGAKLLRDMIKRK--INPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 470

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++   + +    D+A +++  M   G  PN RT  I+I+GYCK  +I + L   R M   
Sbjct: 471 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR 530

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           GV  + V +N LI+GF E+   +   E+   M   +V P+++TY  +++     G  +K 
Sbjct: 531 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 590

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            EIF+ + K+ ++ D   Y+I+  G     + + A +L  ++   G  P V  +  +I G
Sbjct: 591 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 650

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G +  A  +F KM E G +P+  T+  L+  +       ++ ++++ +K  G    
Sbjct: 651 LCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVD 710

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVES 538
            ST  ++ +      L+ +     SK  N  ++     + + P +S
Sbjct: 711 ASTIKMVIDM-----LSDDKANYFSKYHNCSKSTSFWNQPEKPSDS 751



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/474 (26%), Positives = 227/474 (47%), Gaps = 16/474 (3%)

Query: 62  FCMNKESCRTVRSMTK---------------LMNSLIERGKPQEAQAIFNNLIEGGHKPS 106
           FC  ++ C    +M K               L+N L   G+  EA  + + ++E GHKP 
Sbjct: 231 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPD 290

Query: 107 LVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW 166
           L+T  TL+  L +  +      ++ ++ E G  P+++ +  V+N   +SG    AM+   
Sbjct: 291 LITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLR 350

Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
           KM+E  +      Y+ +I G    G  + +  L + M  +G +  N+ TYN+L+  +CN 
Sbjct: 351 KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG-ITTNIITYNILIGGFCNA 409

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
               +   ++  M    + P+VVT++ +  ++ + G+  +AEE+  EM H G+ P+  T 
Sbjct: 410 GRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITY 469

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             +I G+CKE  + +A +    M   G  PN+  FN+LI G+ +    D   E+   M  
Sbjct: 470 TSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSL 529

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             V  D +TY+T++  +   G ++  KE+F +M    + P+   Y IL  G     E EK
Sbjct: 530 RGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEK 589

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A E+   + +S    ++ I+  II G C+   +D A ++F  +   GV P +KT+  ++ 
Sbjct: 590 ALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIG 649

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           G  +      AE + + M+  G  P   T+ +L  A    G   ++ +++ ++K
Sbjct: 650 GLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELK 703



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/220 (23%), Positives = 108/220 (49%), Gaps = 1/220 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +R+   L+N   +  +  +   +F  +   G     VTY TL+       + N    +  
Sbjct: 501 IRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQ 560

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++    + P+ + +  +++   ++G  E+A++ F K+++S +      YN +I G   A 
Sbjct: 561 EMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 620

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +++  L   +  +G VKP ++TYN+++   C +  ++EA  +  KM   G  PD  TY
Sbjct: 621 KVDDAWDLFCSLPLKG-VKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTY 679

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           N +  A+  +G+A ++ ++I E++  G   +  T  ++I 
Sbjct: 680 NILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 719



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 79/342 (23%), Positives = 146/342 (42%), Gaps = 50/342 (14%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M+  G  PT +   ++I    ++  P +  + LDLM++    +P              ++
Sbjct: 38  MRSLGGNPTQAQLKSIIASENLSS-PFDFNRFLDLMAKHLKTEPF-------------DR 83

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG--------- 278
            + +A+ V+ K     +   V     I T+  +  E ++ +E I E++            
Sbjct: 84  QLRDAFKVLDKEGTGFVA--VADLRHILTSIGEKLEPNEFDEWIKEVDVGSDGKIRYEDF 141

Query: 279 ---VQPNGRTCGI---IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
              +  N R       + SG   + K  +A+   R M      P ++ F+ L   F  I 
Sbjct: 142 IARMVANDRNLSYRERLRSGLV-DIKADDAIDLFRDMIHSRPLPTVIDFSRL---FSAIA 197

Query: 333 DRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEI---FDDMGKA---G 383
                D VLAL K+     +  ++ T S ++N +       +C+++   F  MGK    G
Sbjct: 198 KTKQYDLVLALCKQMELKGIAHNLYTLSIMINCFC------RCRKLCLAFSAMGKIIKLG 251

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
            +P+   +S L  G   E    +A EL+  M+E G  P+++   T+++G C  G    A+
Sbjct: 252 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 311

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
            + DKM E+G  PN  T+  ++    ++ Q   A E+L+ M+
Sbjct: 312 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKME 353


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 216/394 (54%), Gaps = 3/394 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++  I+ G  +EA  I + +I  G K ++VTY  ++  +          S+ +++  
Sbjct: 350 TALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLM 409

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++PD+  +N +I+ + +S +M +A +   +MK   LTP+  TY+ LI G   +   ++
Sbjct: 410 AGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQK 469

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + ++LD M R G VKPN+  Y  L++A+  E     A  ++  M A+G+ PD+  YN + 
Sbjct: 470 ANEVLDQMIRNG-VKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLI 528

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               +  + ++A+ ++V+M   G++PN  T G  I+ Y K G+I+ A R+ + M   G+ 
Sbjct: 529 IGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIV 588

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN VI+ +LIKG  ++ +          M E  + PD+  YS I+++ S  G   +   +
Sbjct: 589 PNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGV 648

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS--GW 433
           F    K G+ PD   Y+ L  G+ +E + EKA +L   M+ +G +PN+V++ T+I+  G+
Sbjct: 649 FLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGY 708

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           C  G++  A ++FD+M   G+SP+   +  L+ G
Sbjct: 709 CKSGNLTEAFKLFDEMISKGISPDGYIYCILIDG 742



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 235/496 (47%), Gaps = 38/496 (7%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M KE    + +    +  L + G   EA  +   ++E G  P   TYT L+     QKR 
Sbjct: 268 MEKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRS 327

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                I   +  +G++P+   + A+I+ F + GN+EEA+    +M   GL     TYN +
Sbjct: 328 KEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAM 387

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G   AG+  +++ L + M   G ++P+  TYN+L+  +    ++ +A  ++ +M A  
Sbjct: 388 IGGIAKAGEMAKAMSLFNEMLMAG-IEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARK 446

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           + P   TY+ + +    + +  +A EV+ +M  NGV+PN    G +I  Y +E + + A+
Sbjct: 447 LTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAI 506

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
              + M   GV P+L  +N LI G       +    +L  M E  + P+  TY   +N +
Sbjct: 507 ELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLY 566

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV------------------------ 399
           S +G +   +  F DM  +GI P+   Y+IL KG+                         
Sbjct: 567 SKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDI 626

Query: 400 -----------REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
                      +  + ++A  + +  +++G  P+V ++ ++ISG+C +G +++A +++D+
Sbjct: 627 RAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDE 686

Query: 449 MCEHGVSPNLKTFETLM--WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           M  +G++PN+  + TL+  +GY ++     A ++   M + G+ P    + +L +     
Sbjct: 687 MLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKE 746

Query: 507 GLTKEAKRILSKIKNK 522
           G  ++A  +  + + K
Sbjct: 747 GNLEKALSLFHEAQQK 762



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 200/427 (46%), Gaps = 2/427 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   EA ++F   I  G  P+L+    L+  L           +   + E  + PD   +
Sbjct: 186 GFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTY 245

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             VI A  + G++ +      +M E    P   TYN  I G    G  +E++++  LM  
Sbjct: 246 TNVIKAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMME 304

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G + P+  TY +LV  +C +K   EA  +   M +SG+ P+  TY  +   + + G  +
Sbjct: 305 KG-LGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIE 363

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  +  EM   G++ N  T   +I G  K G++ +A+     M   G+ P+   +NLLI
Sbjct: 364 EALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLI 423

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G+++  D     E+LA MK  ++ P   TYS +++    +  + K  E+ D M + G+K
Sbjct: 424 DGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVK 483

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P+   Y  L K YV+E   E A ELL  MI +G  P++  +  +I G C    ++ A  +
Sbjct: 484 PNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKML 543

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
              M E G+ PN  T+   +  YS++ +   AE   + M + G+ P    + +L +    
Sbjct: 544 LVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCD 603

Query: 506 TGLTKEA 512
            G T EA
Sbjct: 604 VGNTVEA 610



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 206/424 (48%), Gaps = 10/424 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ + ++  + + A  +   +I  G  P L  Y  L+  L   K+      ++  + E G
Sbjct: 492 LIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKG 551

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P++  + A IN +S+SG ++ A   F  M  SG+ P    Y  LIKG+   G   E++
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M  +G + P++R Y+ ++ +        EA  V  K   +G+ PDV  YN++ + 
Sbjct: 612 STFKCMLEKGLI-PDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISG 670

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS--GYCKEGKIKEALRFARTMKEYGVH 315
           + + G+ ++A ++  EM HNG+ PN      +I+  GYCK G + EA +    M   G+ 
Sbjct: 671 FCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGIS 730

Query: 316 PNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVNP--DVITYSTIMNAWSTAGFMDKC 372
           P+  I+ +LI G      ++G +++ L+L  E +      +  ++++++++   G + + 
Sbjct: 731 PDGYIYCILIDG----CGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEA 786

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           +E+FDDM    + P+   Y+IL   Y + +  E+AE+L + M      PN + +T+++  
Sbjct: 787 RELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLS 846

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +   G+  + I +F  M   G++ +   +  +   Y +  +   A ++L      G+  +
Sbjct: 847 YNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLE 906

Query: 493 KSTF 496
              F
Sbjct: 907 DDVF 910



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 201/449 (44%), Gaps = 2/449 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+     LM  L++         ++ +++E    P + TYT ++ A            ++
Sbjct: 206 TLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVL 265

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S++E+    P+   +NA I    ++G ++EA++    M E GL P   TY  L+ G+   
Sbjct: 266 SEMEKE-CKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQ 324

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + +E+  + + M   G + PN  TY  L+  +  E NI EA  +  +M   G+K +VVT
Sbjct: 325 KRSKEAKLIFESMPSSG-LNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVT 383

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +    A+ GE  +A  +  EM   G++P+  T  ++I GY K   + +A      MK
Sbjct: 384 YNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMK 443

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              + P+   +++LI G     D    +EVL  M    V P+V  Y T++ A+      +
Sbjct: 444 ARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYE 503

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              E+   M   G+ PD   Y+ L  G  R ++ E+A+ LL+ M E G  PN   +   I
Sbjct: 504 MAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFI 563

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           + +   G +  A   F  M   G+ PN   +  L+ G+ +      A    + M   G+ 
Sbjct: 564 NLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLI 623

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
           P    +  +  +    G TKEA  +  K 
Sbjct: 624 PDIRAYSAIIHSLSKNGKTKEAMGVFLKF 652



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/418 (26%), Positives = 203/418 (48%), Gaps = 8/418 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            +N   + G+ Q A+  F +++  G  P+ V YT L+             S    + E G
Sbjct: 562 FINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKG 621

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   ++A+I++ S++G  +EAM  F K  ++G+ P    YN+LI G+   G  E++ 
Sbjct: 622 LIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKAS 681

Query: 198 KLLDLMSREGNVKPNLRTYNVLVR--AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +L D M   G + PN+  YN L+    +C   N+TEA+ +  +M + G+ PD   Y  + 
Sbjct: 682 QLYDEMLHNG-INPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILI 740

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI--IISGYCKEGKIKEALRFARTMKEYG 313
               + G  ++A  +  E +   V   G       +I  +CK GK+ EA      M +  
Sbjct: 741 DGCGKEGNLEKALSLFHEAQQKSV---GSLSAFNSLIDSFCKHGKVIEARELFDDMVDKK 797

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + PN+V + +LI  + +    +  +++   M+   + P+ +TY++++ +++  G   K  
Sbjct: 798 LTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMI 857

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F DM   GI  DA AY ++A  Y +E +  +A +LL   +  G      +F  +I   
Sbjct: 858 SLFKDMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHL 917

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           C +  +   +E+  +M +  +S + KT  TL+ G+ ++     A ++L +M+  G  P
Sbjct: 918 CKEKQISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 975



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/354 (23%), Positives = 158/354 (44%), Gaps = 43/354 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +R+ + +++SL + GK +EA  +F   ++ G  P +  Y +L++    +        +  
Sbjct: 626 IRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYD 685

Query: 132 QVEENGMDPDSIFFNAVIN--AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           ++  NG++P+ + +N +IN   + +SGN+ EA   F +M   G++P    Y  LI G G 
Sbjct: 686 EMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGK 745

Query: 190 AGKPEESVKLLDLMSREGNVKP--NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
            G  E+++ L      E   K   +L  +N L+ ++C    + EA  +   M    + P+
Sbjct: 746 EGNLEKALSLF----HEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPN 801

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN------------------------- 282
           +VTY  +  AY +    ++AE++ ++ME   + PN                         
Sbjct: 802 IVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFK 861

Query: 283 -----GRTC-----GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
                G  C     G++ S YCKEGK  EAL+        G+     +F+ LI    +  
Sbjct: 862 DMEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEK 921

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
               V E+L+ M +  ++    T +T++  +  +G  D+  ++   M + G  P
Sbjct: 922 QISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 975



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 154/368 (41%), Gaps = 38/368 (10%)

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           E +D+  +          + ++  I  + + G   E+  +      EG   P L   N L
Sbjct: 155 EILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLNEASSVFIASISEGFF-PTLICCNNL 213

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +R       +   W V   M  + + PDV TY  +  A+ + G+  + + V+ EME    
Sbjct: 214 MRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKE-- 271

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
                         CK                    PNL  +N  I G  +    D   E
Sbjct: 272 --------------CK--------------------PNLFTYNAFIGGLCQTGAVDEALE 297

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           V  LM E  + PD  TY+ +++ +       + K IF+ M  +G+ P+   Y+ L  G++
Sbjct: 298 VKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFI 357

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +E   E+A  +   MI  G   NVV +  +I G    G M +A+ +F++M   G+ P+  
Sbjct: 358 KEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTW 417

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK- 518
           T+  L+ GY ++    +A E+L  MKA  + P   T+ +L      +   ++A  +L + 
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQM 477

Query: 519 IKNKERTN 526
           I+N  + N
Sbjct: 478 IRNGVKPN 485



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/331 (21%), Positives = 155/331 (46%), Gaps = 20/331 (6%)

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA-------- 264
           L +Y++L    CN   I +A N++ K+  +  KP +   +++   Y + G +        
Sbjct: 120 LHSYSILAIRLCNSGLIHQADNMLEKLLQT-RKPPLEILDSLVRCYREFGGSNLTVFDIF 178

Query: 265 ----------DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                     ++A  V +     G  P    C  ++    K   +    +   +M E  +
Sbjct: 179 IDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKI 238

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P++  +  +IK   ++ D      VL+ M++    P++ TY+  +      G +D+  E
Sbjct: 239 VPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEK-ECKPNLFTYNAFIGGLCQTGAVDEALE 297

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +   M + G+ PD H Y++L  G+ +++  ++A+ +  +M  SG +PN   +T +I G+ 
Sbjct: 298 VKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFI 357

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +G+++ A+ + D+M   G+  N+ T+  ++ G ++A +  +A  +   M   G+ P   
Sbjct: 358 KEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTW 417

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNKERT 525
           T+ LL +    +    +A  +L+++K ++ T
Sbjct: 418 TYNLLIDGYLKSHDMAKACELLAEMKARKLT 448



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 107/216 (49%), Gaps = 1/216 (0%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           ++S  ++ +   L++S  + GK  EA+ +F+++++    P++VTYT L+ A    +    
Sbjct: 761 QKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEE 820

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              +   +E   + P+++ + +++ ++++ GN  + +  F  M+  G+      Y  +  
Sbjct: 821 AEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMAS 880

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
            Y   GK  E++KLL+    EG +K     ++ L+   C EK I+    ++ +M    + 
Sbjct: 881 AYCKEGKSLEALKLLNKSLVEG-IKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELS 939

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
               T NT+   + ++G  D+A +V+  M+  G  P
Sbjct: 940 LSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVP 975


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 218/445 (48%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L+E  K +  + +++ + E G KP +VT+ TL+ AL    +  +   ++ ++  +G
Sbjct: 156 LLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSSG 215

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   F  ++  F E G+++ A+    +M E G +PT  T N LI GY   G+ E+++
Sbjct: 216 VAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDAL 275

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             +      G  +P+  TYN  V   C   ++  A  VM  M   G  PDV TYN +   
Sbjct: 276 GYIQQEIANG-FEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 334

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +NG+ ++A+ ++ +M   G  P+  T   +I   C   +++EAL  AR +   G+ P+
Sbjct: 335 LCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPD 394

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  FN+LI    ++ D      +   MK     PD +TY+T+++   + G + K  ++  
Sbjct: 395 VYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 454

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M  AG       Y+ +  G  ++   E+AEE+   M   G   N + F T+I G C D 
Sbjct: 455 EMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 514

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D A ++  +M   G+ PN  T+ +++  Y +     +A +ILQ M A G      T+ 
Sbjct: 515 RIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYG 574

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L       G T+ A ++L  ++ K
Sbjct: 575 TLINGLCKAGRTQVALKLLRGMRIK 599



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 209/450 (46%), Gaps = 2/450 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T LM   +E G  + A  +   ++E G  P+ VT   L+       R       + Q 
Sbjct: 222 TFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGYCKLGRVEDALGYIQQE 281

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             NG +PD I +N  +N   ++G++  A+     M + G  P   TYN ++      G+ 
Sbjct: 282 IANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 341

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           EE+  +L+ M   G + P++ T+N L+ A C+   + EA ++  ++   G+ PDV T+N 
Sbjct: 342 EEAKGILNQMVERGCL-PDITTFNTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNI 400

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A  + G+   A  +  EM+ +G  P+  T   +I   C  GK+ +AL   + M+  G
Sbjct: 401 LINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAG 460

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              + V +N +I G  + M  +  +EV   M    ++ + IT++T+++       +D   
Sbjct: 461 CPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDAN 520

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           ++   M   G++P+   Y+ +   Y ++ + +KA ++L TM  +GF  +VV + T+I+G 
Sbjct: 521 QLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGL 580

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G    A+++   M   G+    K +  ++           A  + + M   G  P  
Sbjct: 581 CKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDA 640

Query: 494 STFLLLAEAR-RATGLTKEAKRILSKIKNK 522
            T+ ++     R  G  +EA   L ++ +K
Sbjct: 641 FTYKIVFRGLCRGGGSIREAFDFLLEMVDK 670



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/352 (21%), Positives = 157/352 (44%), Gaps = 4/352 (1%)

Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDL-MSREGNVKPNLRTYNVLVRAWCNEKNITE 231
             P    Y  +I+  G A    + +K+L   M REG+ +  +   +  + ++  ++   +
Sbjct: 73  FAPGPEVYEEIIRKLGAAAGAADLMKVLVTEMRREGH-QVRVGVVHSFLESYARQQLFVD 131

Query: 232 AWN-VMHKM-AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
           A + V++++    G++ D V YN +     +  +    E V  EM   G++P+  T   +
Sbjct: 132 AVDLVLNQLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTL 191

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           +   C+  +++ A+     M   GV P+   F  L++GFVE         V A M E   
Sbjct: 192 MKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGC 251

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
           +P  +T + ++N +   G ++            G +PD   Y+    G  +      A +
Sbjct: 252 SPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALK 311

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           ++  M++ G  P+V  +  +++  C +G ++ A  + ++M E G  P++ TF TL+    
Sbjct: 312 VMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALC 371

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
              +   A ++ + +   G+ P   TF +L  A    G  + A R+  ++K+
Sbjct: 372 SGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKS 423



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 122/270 (45%), Gaps = 38/270 (14%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M    C R+  +   +++ L ++ + +EA+ +F+ +   G   + +T+ TL+  L   KR
Sbjct: 456 MESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKR 515

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +  + ++SQ+   G+ P++I +N+++  + + G++++A D    M  +G      TY T
Sbjct: 516 IDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMTANGFEVDVVTYGT 575

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G   AG+ + ++KLL  M  +G ++   + YN ++++     N  +A N+  +M   
Sbjct: 576 LINGLCKAGRTQVALKLLRGMRIKG-MRATPKAYNPVIQSLFRRNNTRDAMNLFREMTEV 634

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK-EGKIKE 301
           G  PD  TY                                    I+  G C+  G I+E
Sbjct: 635 GEPPDAFTYK-----------------------------------IVFRGLCRGGGSIRE 659

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
           A  F   M + G  P    F +L +G + +
Sbjct: 660 AFDFLLEMVDKGFIPEFSSFRMLAEGLLNL 689


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 222/416 (53%), Gaps = 1/416 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+  L  +G+ ++A    + L+  G + + V+Y TL+  +       +    + ++
Sbjct: 131 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKI 190

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +     PD + +N +I+A  +   + EA   F +M   G++    TYNTLI G+ I GK 
Sbjct: 191 DGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKL 250

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E++ LL+ M  +  + PN+ TYN+LV A C E  + EA +V+  M  + +KPDV+TY+T
Sbjct: 251 KEAIGLLNEMVLK-TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    E  +A+ V   M   GV P+  T  I+I+G+CK   + EAL   + M +  
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P +V ++ LI G  +      V +++  M++     DVITYS++++     G +D+  
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAI 429

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F+ M    I+P+   ++IL  G  +    + A+E+   ++  G+H NV  +  +I+G 
Sbjct: 430 ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGH 489

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           C  G ++ A+ +  KM ++G  PN  TFET++    +  +  +AE++L+ M A G+
Sbjct: 490 CKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 122/466 (26%), Positives = 222/466 (47%), Gaps = 34/466 (7%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A + FN ++   H P ++ +  +L +    K +++  S+  ++E  G+ PD I  N +I
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN- 208
           N F   G +        K+ + G  P T T NTLIKG  + G+ ++++   D +  +G  
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161

Query: 209 ---------------------------------VKPNLRTYNVLVRAWCNEKNITEAWNV 235
                                             KP++  YN ++ A C  + ++EA+ +
Sbjct: 162 LNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGL 221

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
             +MA  G+  DVVTYNT+   +   G+  +A  ++ EM    + PN  T  I++   CK
Sbjct: 222 FSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK 281

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           EGK+KEA      M +  V P+++ ++ L+ G+  + +      V   M    V PDV T
Sbjct: 282 EGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHT 341

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+ ++N +     +D+   +F +M +  + P    YS L  G  +        +L+  M 
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMR 401

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           + G   +V+ ++++I G C +G +DRAI +F+KM +  + PN+ TF  L+ G  +  +  
Sbjct: 402 DRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLK 461

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            A+E+ Q +   G H    T+ ++       GL +EA  +LSK+++
Sbjct: 462 DAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMED 507



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/405 (24%), Positives = 185/405 (45%), Gaps = 42/405 (10%)

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
           N+++A+  F +M     TP    +N ++  +        +V L   +  +G ++P+L T 
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKG-IQPDLITL 97

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N+L+  +C+   IT  ++V+ K+   G  PD VT NT+       G+  +A     ++  
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFAR-------------------TMKEY----- 312
            G Q N  +   +I+G CK G  + A++F R                    M +Y     
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217

Query: 313 -----------GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYST 358
                      G+  ++V +N LI GF  +     + E + L+ E     +NP+V TY+ 
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIV---GKLKEAIGLLNEMVLKTINPNVYTYNI 274

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++A    G + + K +   M KA +KPD   YS L  GY    E +KA+ +   M   G
Sbjct: 275 LVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMG 334

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P+V  +T +I+G+C +  +D A+ +F +M +  + P + T+ +L+ G  ++ +     
Sbjct: 335 VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVW 394

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           +++  M+  G      T+  L +     G    A  + +K+K++E
Sbjct: 395 DLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQE 439



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 140/331 (42%), Gaps = 35/331 (10%)

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           +N+ +A +  ++M      P ++ +N I  ++A+      A  +   +E  G+QP+  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------VEIMDR--- 334
            I+I+ +C  G+I         + + G  P+ V  N LIKG          +   D+   
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 335 --------------DGVDEV---LALMKEFR------VNPDVITYSTIMNAWSTAGFMDK 371
                         +GV ++    A +K  R        PDV+ Y+TI++A      + +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSE 217

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F +M   GI  D   Y+ L  G+    + ++A  LL  M+    +PNV  +  ++ 
Sbjct: 218 AYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             C +G +  A  V   M +  V P++ T+ TLM GY    +  +A+ +   M   GV P
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              T+ +L        +  EA  +  ++  K
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQK 368



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 64/136 (47%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L + G    A A+FN + +   +P++ T+T LL  L    R      +  
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQ 468

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G   +   +N +IN   + G +EEA+    KM+++G  P   T+ T+I       
Sbjct: 469 DLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKD 528

Query: 192 KPEESVKLLDLMSREG 207
           + +++ KLL  M   G
Sbjct: 529 ENDKAEKLLRQMIARG 544


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 217/404 (53%), Gaps = 3/404 (0%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F MN  S  ++ +   ++N L + GK ++A+    ++   G KP++VTY T++    ++ 
Sbjct: 208 FRMNIRS--SLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
           +F     I   +++ G++PD   +N+ I+   + G +EEA     KM E GL P   TYN
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            LI GY   G  +++    D M  +G +  +L TYN+ + A   E  + +A N++ +M  
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKG-IMASLVTYNLFIHALFMEGRMGDADNMIKEMRE 384

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            GM PD VT+N +   Y + G+A +A  ++ EM   G+QP   T   +I    K  ++KE
Sbjct: 385 KGMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKE 444

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A      +++ G+ P++++FN LI G     + D   ++L  M   +V PD ITY+T+M 
Sbjct: 445 ADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQ 504

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +   G +++ +++ D+M + GIKPD  +Y+ L  GY +  + + A  +   M+ +GF P
Sbjct: 505 GYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDP 564

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
            ++ +  +I G C +   + A E+  +M   G++P+  T+ +++
Sbjct: 565 TILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSII 608



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 212/460 (46%), Gaps = 36/460 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +  E  KP EA   F  + E G  P++ T   +L+      R      + +++    
Sbjct: 152 LVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMN 211

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +      FN +IN   + G +++A +    M+  G+ P   TYNT+I G+ + GK + + 
Sbjct: 212 IRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRAR 271

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +   M  +G ++P+  TYN  +   C E  + EA  ++ KM   G+ P+ VTYN +   
Sbjct: 272 VIFQTMKDKG-LEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDG 330

Query: 258 YAQNGEADQ-----------------------------------AEEVIVEMEHNGVQPN 282
           Y   G+ D+                                   A+ +I EM   G+ P+
Sbjct: 331 YCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPD 390

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T  I+I+GYC+ G  K A      M   G+ P LV +  LI    +       D + +
Sbjct: 391 AVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFS 450

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            +++  + PD+I ++ +++     G +D+  ++  +M    + PD   Y+ L +GY RE 
Sbjct: 451 KIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREG 510

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           + E+A +LL  M   G  P+ + + T+ISG+   G M  A  V D+M   G  P + T+ 
Sbjct: 511 KVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYN 570

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            L+ G  + ++   AEE+L+ M + G+ P  ST+L + EA
Sbjct: 571 ALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEA 610



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/446 (23%), Positives = 199/446 (44%), Gaps = 36/446 (8%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           KPS+     L+ + T   R  +I   ++   +      ++ F+ ++ A+ E     EA++
Sbjct: 110 KPSINLIQRLILSPTCTNR--TIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALE 167

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL-------------------LDLMS 204
            F+ +KE G  P   T N ++  +    + + +  L                   ++++ 
Sbjct: 168 CFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLC 227

Query: 205 REGN---------------VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +EG                VKPN+ TYN ++   C       A  +   M   G++PD  
Sbjct: 228 KEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCY 287

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN+  +   + G  ++A  +I +M   G+ PN  T   +I GYC +G + +A  +   M
Sbjct: 288 TYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEM 347

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G+  +LV +NL I            D ++  M+E  + PD +T++ ++N +   G  
Sbjct: 348 ISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNILINGYCRCGDA 407

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +   + D+M   GI+P    Y+ L     +    ++A+ L   + + G  P++++F  +
Sbjct: 408 KRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNAL 467

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G C++G++DRA ++  +M    V P+  T+ TLM GY    +   A ++L  MK  G+
Sbjct: 468 IDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGI 527

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRI 515
            P   ++  L       G  K+A R+
Sbjct: 528 KPDHISYNTLISGYSKRGDMKDAFRV 553



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 72/185 (38%), Gaps = 38/185 (20%)

Query: 373 KEIFDDMGKAGIKPDAHA---YSILAKGYVREQEPEKAEELLMTMIESGFHPNV------ 423
           + IFD++  A  + DA     + +L + Y   ++P +A E    + E GF PN+      
Sbjct: 128 RTIFDELALARDRVDAKTTLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQM 187

Query: 424 -----------------------------VIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
                                          F  +I+  C +G + +A E    M   GV
Sbjct: 188 LSLFLKLNRTQMAWVLYAEMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGV 247

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            PN+ T+ T++ G+    +  RA  I Q MK  G+ P   T+          G  +EA  
Sbjct: 248 KPNVVTYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASG 307

Query: 515 ILSKI 519
           ++ K+
Sbjct: 308 LICKM 312


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 223/426 (52%), Gaps = 2/426 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + +++SL++ GK  +A  +   ++  G  P++VTY++LL  L    + +   +++ 
Sbjct: 220 VFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQ 279

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G  P+ + +N +I+   + G ++EA     +M + G  P   TY  L+  +   G
Sbjct: 280 RMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCG 339

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K E+++ L+++M  +G V PNL TYN L+  +C +  +  A  ++  M   G  P+VV+Y
Sbjct: 340 KAEDAIGLVEVMVEKGYV-PNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSY 398

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+     +  +  +   ++ +M  N   P+  T   II   CK  ++  A      ++E
Sbjct: 399 NTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE 458

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM-KEFRVNPDVITYSTIMNAWSTAGFMD 370
            G  PNLV +N L+ G  +    D  + +L  M ++   +PD+ITY+T+++    +  +D
Sbjct: 459 SGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVD 518

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  ++F  M   G+ PD   YSI+     + +  ++A  +L  M+++GF P  + + T+I
Sbjct: 519 RAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLI 578

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+C  G++D+A+E+   +   G  P++ TF   +   S+  +  +A E+L+ M   G+ 
Sbjct: 579 DGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLV 638

Query: 491 PQKSTF 496
           P   T+
Sbjct: 639 PDTVTY 644



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 221/447 (49%), Gaps = 14/447 (3%)

Query: 67  ESCRTVRSM------------TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL 114
           ++CR V +M            + L++ L + GK  EA A+   +   G  P++VTY T++
Sbjct: 238 DACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTII 297

Query: 115 AALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT 174
                  R +  + ++ ++ + G  P+ + +  +++AF + G  E+A+     M E G  
Sbjct: 298 DGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYV 357

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P   TYN+L+  +    + E + +LL  M ++G V PN+ +YN ++   C    + E   
Sbjct: 358 PNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCV-PNVVSYNTVIAGLCKATKVHEGVL 416

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           ++ +M ++   PD+VT+NTI  A  +    D A E+   ++ +G  PN  T   ++ G C
Sbjct: 417 LLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLC 476

Query: 295 KEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           K  +  +A    R M ++ G  P+++ +N +I G  +    D   ++   M    + PD 
Sbjct: 477 KSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDD 536

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           +TYS ++++     FMD+   + + M K G  P A  Y  L  G+ +    +KA E+L  
Sbjct: 537 VTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQL 596

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           ++  G +P+VV F+  I      G + +A E+ + M   G+ P+  T+ TL+ G+ +A +
Sbjct: 597 LLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNTLLKGFCDASR 656

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLA 500
              A ++ ++M+  G  P  +T+  L 
Sbjct: 657 TEDAVDLFEVMRQCGCEPDNATYTTLV 683



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 125/473 (26%), Positives = 241/473 (50%), Gaps = 21/473 (4%)

Query: 67  ESCRTVRSMTK------------LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL 114
           E+CR +  M +            L++     G    A  +   + E G++P+ +TY  ++
Sbjct: 132 EACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIM 191

Query: 115 AALTIQKRFNSIHSIMSQVEENGMDPDSIF-FNAVINAFSESGNMEEAMDTFWKMKESGL 173
             L   ++ +S   +  ++EE+G  P  +F ++ ++++  +SG +++A      M   G 
Sbjct: 192 HGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGC 251

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
           +P   TY++L+ G   AGK +E+  LL  M+R G   PN+ TYN ++   C    I EA+
Sbjct: 252 SPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSG-CSPNIVTYNTIIDGHCKLGRIDEAY 310

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
           +++ +M   G +P+VVTY  +  A+ + G+A+ A  ++  M   G  PN  T   ++  +
Sbjct: 311 HLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMF 370

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN--- 350
           CK+ +++ A +   +M + G  PN+V +N +I G  +      V E + L+++   N   
Sbjct: 371 CKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATK---VHEGVLLLEQMLSNNCV 427

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           PD++T++TI++A      +D   E+F+ + ++G  P+   Y+ L  G  + +  ++AE L
Sbjct: 428 PDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYL 487

Query: 411 LMTMI-ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L  M  + G  P+++ + T+I G C    +DRA ++F +M   G++P+  T+  ++    
Sbjct: 488 LREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLC 547

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           + R    A  +L++M   G  P   T+  L +    TG   +A  IL  + +K
Sbjct: 548 KWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSK 600



 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 219/447 (48%), Gaps = 2/447 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N L +  +  +A  +   +++ G  P++ +Y T+L       R  +   ++ Q+   G
Sbjct: 50  MINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRG 109

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + +  VIN   +   ++EA     KM + G  P   TY TL+ G+   G  + +V
Sbjct: 110 CPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAV 169

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-MKPDVVTYNTIAT 256
           +L+  M+  G  +PN  TYN ++   C+ + +  A  +  +M  SG   PDV TY+TI  
Sbjct: 170 ELVRKMTERG-YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVD 228

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           +  ++G+ D A  ++  M   G  PN  T   ++ G CK GK+ EA    + M   G  P
Sbjct: 229 SLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSP 288

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N+V +N +I G  ++   D    +L  M +    P+V+TY+ +++A+   G  +    + 
Sbjct: 289 NIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLV 348

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           + M + G  P+   Y+ L   + ++ E E+A +LL +MI+ G  PNVV + T+I+G C  
Sbjct: 349 EVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKA 408

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             +   + + ++M  +   P++ TF T++    +  +   A E+  +++  G  P   T+
Sbjct: 409 TKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTY 468

Query: 497 LLLAEARRATGLTKEAKRILSKIKNKE 523
             L      +    +A+ +L ++  K+
Sbjct: 469 NSLVHGLCKSRRFDQAEYLLREMTRKQ 495



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 215/426 (50%), Gaps = 1/426 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   +++   +  + + A  +   ++  G  P +V+YTT++  L    + +    +M 
Sbjct: 79  VFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMD 138

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G  P+ I +  +++ F   G+++ A++   KM E G  P   TYN ++ G     
Sbjct: 139 KMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGR 198

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K + +++L   M   G+  P++ TY+ +V +      + +A  ++  M + G  P+VVTY
Sbjct: 199 KLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTY 258

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +++     + G+ D+A  ++  M  +G  PN  T   II G+CK G+I EA      M +
Sbjct: 259 SSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVD 318

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PN+V + +L+  F +    +    ++ +M E    P++ TY+++++ +     +++
Sbjct: 319 GGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVER 378

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++   M + G  P+  +Y+ +  G  +  +  +   LL  M+ +   P++V F TII 
Sbjct: 379 ACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIID 438

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM-KAFGVH 490
             C    +D A E+F+ + E G +PNL T+ +L+ G  ++R+  +AE +L+ M +  G  
Sbjct: 439 AMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCS 498

Query: 491 PQKSTF 496
           P   T+
Sbjct: 499 PDIITY 504



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 209/426 (49%), Gaps = 3/426 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L + G+  +A   F  + +    P  VTY T++  L+   R +    ++ ++ +NG
Sbjct: 16  ILRGLCDAGQCSDAVLHFREMSKTC-PPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNG 74

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+   +N V++ F ++  +E A+    +M   G  P   +Y T+I G     + +E+ 
Sbjct: 75  FAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDEAC 134

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +++D M + G  +PN+ TY  LV  +C   ++  A  ++ KM   G +P+ +TYN I   
Sbjct: 135 RVMDKMIQRG-CQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHG 193

Query: 258 YAQNGEADQAEEVIVEMEHNG-VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
                + D A ++  EME +G   P+  T   I+    K GK+ +A R    M   G  P
Sbjct: 194 LCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSP 253

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N+V ++ L+ G  +    D    +L  M     +P+++TY+TI++     G +D+   + 
Sbjct: 254 NVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLL 313

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M   G +P+   Y++L   + +  + E A  L+  M+E G+ PN+  + +++  +C  
Sbjct: 314 EEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKK 373

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             ++RA ++   M + G  PN+ ++ T++ G  +A +      +L+ M +    P   TF
Sbjct: 374 DEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTF 433

Query: 497 LLLAEA 502
             + +A
Sbjct: 434 NTIIDA 439



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 199/404 (49%), Gaps = 3/404 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C   + +   +++   + G+  EA  +   +++GG +P++VTYT LL A     +
Sbjct: 281 MTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGK 340

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 ++  + E G  P+   +N++++ F +   +E A      M + G  P   +YNT
Sbjct: 341 AEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNT 400

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G   A K  E V LL+ M    N  P++ T+N ++ A C    +  A+ + + +  S
Sbjct: 401 VIAGLCKATKVHEGVLLLEQM-LSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQES 459

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEM-EHNGVQPNGRTCGIIISGYCKEGKIKE 301
           G  P++VTYN++     ++   DQAE ++ EM    G  P+  T   +I G CK  ++  
Sbjct: 460 GCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDR 519

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A +    M   G+ P+ V ++++I    +    D  + VL LM +   +P  ITY T+++
Sbjct: 520 AYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLID 579

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +   G +DK  EI   +   G  PD   +SI      +     +A ELL TM+ +G  P
Sbjct: 580 GFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVP 639

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           + V + T++ G+C     + A+++F+ M + G  P+  T+ TL+
Sbjct: 640 DTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 185/388 (47%), Gaps = 3/388 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+++  + GK ++A  +   ++E G+ P+L TY +LL     +        ++S
Sbjct: 325 VVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLS 384

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G  P+ + +N VI    ++  + E +    +M  +   P   T+NT+I       
Sbjct: 385 SMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTY 444

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA-ASGMKPDVVT 250
           + + + +L +L+   G   PNL TYN LV   C  +   +A  ++ +M    G  PD++T
Sbjct: 445 RVDIAYELFNLIQESG-CTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIIT 503

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+     ++   D+A ++ ++M  +G+ P+  T  I+IS  CK   + EA      M 
Sbjct: 504 YNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELML 563

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G  P  + +  LI GF +  + D   E+L L+      PDV+T+S  ++  S  G + 
Sbjct: 564 KNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLR 623

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  E+ + M +AG+ PD   Y+ L KG+      E A +L   M + G  P+   +TT++
Sbjct: 624 QAGELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683

Query: 431 SGWCSDGSM-DRAIEVFDKMCEHGVSPN 457
                  S  D   EV   M + G   N
Sbjct: 684 GHLVDKKSYKDLLAEVSKSMVDTGFKLN 711



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 170/346 (49%), Gaps = 3/346 (0%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M   GL      + ++++G   AG+  ++V     MS+     P+  TYN ++       
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSK--TCPPDSVTYNTMINGLSKSD 58

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
            + +A  ++ +M  +G  P+V +YNT+   + +    + A  ++ +M   G  P+  +  
Sbjct: 59  RLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYT 118

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
            +I+G CK  ++ EA R    M + G  PN++ +  L+ GF  + D DG  E++  M E 
Sbjct: 119 TVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 178

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG-IKPDAHAYSILAKGYVREQEPEK 406
              P+ ITY+ IM+   +   +D   ++F +M ++G   PD   YS +    V+  + + 
Sbjct: 179 GYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDD 238

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  L+  M+  G  PNVV +++++ G C  G +D A  +  +M   G SPN+ T+ T++ 
Sbjct: 239 ACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIID 298

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G+ +  +   A  +L+ M   G  P   T+ +L +A    G  ++A
Sbjct: 299 GHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDA 344



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 75/168 (44%), Gaps = 1/168 (0%)

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
            + +I+     AG        F +M K    PD+  Y+ +  G  +    + A  LL  M
Sbjct: 12  VHKSILRGLCDAGQCSDAVLHFREMSKT-CPPDSVTYNTMINGLSKSDRLDDAIRLLEEM 70

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           +++GF PNV  + T++ G+C    ++ A+ + ++M   G  P++ ++ T++ G  +  Q 
Sbjct: 71  VDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQV 130

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             A  ++  M   G  P   T+  L +     G    A  ++ K+  +
Sbjct: 131 DEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTER 178


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/420 (28%), Positives = 224/420 (53%), Gaps = 1/420 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L  +G+ Q+A    + ++  G     ++Y TL+  L       +   ++ +V
Sbjct: 157 TFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + N + P+ + +N +I++  +   + EA D F +M   G++P   TY+ LI G+ I GK 
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKL 276

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            +++ L + M  E N+KP++ T+N+LV A+C +  + E   V   M   G+KP+ VTYN+
Sbjct: 277 NDAIDLFNKMILE-NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNS 335

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    E ++A+ +   M   GV P+ ++  I+I+G+CK  K  EA+   + M    
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P++V ++ LI G  +        +++  M +  V P + TY++I++A      +DK  
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVDKAI 455

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +   +   GI+P+ + YSIL KG  +  + E A ++   ++  G + NV  +T +I G+
Sbjct: 456 ALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGF 515

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C +G  + A+ +  KM ++G  P+ KT+E ++    +  +   AE++L+ M A GV P++
Sbjct: 516 CVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRPRQ 575



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/466 (25%), Positives = 229/466 (49%), Gaps = 34/466 (7%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A ++FN L+     P    +  +L +L   K ++++  +  ++E  G+ P+ +  N +I
Sbjct: 68  DAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 127

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL---------- 199
           N F + G +  A   F K+ + G  P T T+ TLIKG  + G+ +++             
Sbjct: 128 NCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFH 187

Query: 200 ----------------------LDLMSR-EGN-VKPNLRTYNVLVRAWCNEKNITEAWNV 235
                                 LDL+ R +GN V+PN+  YN ++ + C  K + EA+++
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
             +M + G+ PDVVTY+ + + +   G+ + A ++  +M    ++P+  T  I+++ +CK
Sbjct: 248 FSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCK 307

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           +GK+KE       M + G+ PN V +N L+ G+  + + +    +   M +  VNPD+ +
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           YS ++N +      D+   +F +M +  I PD   YS L  G  +      A +L+  M 
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           + G  P +  + +I+   C    +D+AI +  K+ + G+ PN+ T+  L+ G  ++ +  
Sbjct: 428 DRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLE 487

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            A ++ + +   G +    T+ ++ +     GL  EA  +LSK+++
Sbjct: 488 DARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMED 533



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 82/380 (21%), Positives = 189/380 (49%), Gaps = 1/380 (0%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           I +++    F  + ++++A+  F ++     TP    +N ++ G  +  K   +V  L  
Sbjct: 51  ISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKIL-GSLVKSKHYHTVLYLSQ 109

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
                 +KPNL   N+L+  +C    I  A++V  K+   G  PD +T+ T+       G
Sbjct: 110 KMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKG 169

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
           +  QA     ++   G   +  + G +I G CK G+ + AL   + +    V PN+V++N
Sbjct: 170 QIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYN 229

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            +I    ++   +   ++ + M    ++PDV+TYS +++ +   G ++   ++F+ M   
Sbjct: 230 TIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILE 289

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
            IKPD + ++IL   + ++ + ++ + +   M++ G  PN V + +++ G+C    +++A
Sbjct: 290 NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKA 349

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
             +F+ M + GV+P+++++  ++ G+ + ++   A  + + M    + P   T+  L + 
Sbjct: 350 KSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDG 409

Query: 503 RRATGLTKEAKRILSKIKNK 522
              +G    A +++ ++ ++
Sbjct: 410 LSKSGRISYALQLVDQMHDR 429



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 114/210 (54%), Gaps = 1/210 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           ++S + ++N   +  K  EA  +F  +      P +VTY++L+  L+   R +    ++ 
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G+ P    +N++++A  +   +++A+    K+K+ G+ P   TY+ LIKG   +G
Sbjct: 425 QMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSG 484

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K E++ K+ + +  +G+   N+ TY ++++ +C E    EA  ++ KM  +G  PD  TY
Sbjct: 485 KLEDARKVFEGLLVKGH-NLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             I  +  +  E D AE+++ EM   GV+P
Sbjct: 544 EIIILSLFKKDENDMAEKLLREMIARGVRP 573



 Score = 53.5 bits (127), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/199 (20%), Positives = 83/199 (41%), Gaps = 41/199 (20%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+R+   ++++L +  +  +A A+   L + G +P++ TY+ L+  L             
Sbjct: 434 TIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLC------------ 481

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
                                  +SG +E+A   F  +   G      TY  +I+G+ + 
Sbjct: 482 -----------------------QSGKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVE 518

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E++ LL  M   G + P+ +TY +++ +   +     A  ++ +M A G++P    
Sbjct: 519 GLFNEALALLSKMEDNGCI-PDAKTYEIIILSLFKKDENDMAEKLLREMIARGVRP---- 573

Query: 251 YNTIATAYAQNGEADQAEE 269
              IA  + +  E D + E
Sbjct: 574 -RQIAIWFQKKKEYDVSSE 591


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 255/512 (49%), Gaps = 58/512 (11%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T LMN L   G+  +A A+ + ++E GH+P  VTY T++  +       S  +++ 
Sbjct: 10  VVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLR 69

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++E+ +  + + ++A+++   + GN  +A + F +M E G+ P   TYN +I GY   G
Sbjct: 70  KMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYG 129

Query: 192 KPEESVKLL-DLMSR------------------EG---------------NVKPNLRTYN 217
           K  ++ +LL D++ R                  EG               N+ P   TY+
Sbjct: 130 KWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYS 189

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA-----------YAQNGEADQ 266
            ++  +C    + +A ++   M + G  PD++T NT+              + Q G  + 
Sbjct: 190 SMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNV 249

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A+++  EM  NGV P+  TC  +++G C+ GK+++AL   +  ++  +  +    N++I 
Sbjct: 250 AQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIIN 309

Query: 327 GFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           G  +    + VDE   L     VN    DV+TY+ ++  +   G   + ++I+ +M   G
Sbjct: 310 GMCK---GNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKG 366

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           I P    Y+ +  G+ ++   E+A +++ +M+  G  P+VV F+T+I G+C  G +D  +
Sbjct: 367 IIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGL 426

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF--LLLAE 501
           E+F +MC+ G+  +  T+  L+ G+ +      A++I + M + GV P   TF  +L   
Sbjct: 427 ELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGL 486

Query: 502 ARRATGLTKEAKRILSKIKNKERTNEMEAEED 533
             +A     E ++ L+ +++ +++ + E E+D
Sbjct: 487 CTKA-----ELQKGLTMLEDLQKSVDHELEDD 513



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 180/398 (45%), Gaps = 47/398 (11%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M E+G      T+ TL+ G    G+  +++ L+D M  EG+ +P+  TY  +V   C   
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGH-QPDAVTYGTIVNGMCKLG 59

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           +   A N++ KM  S +K +VV Y+ I     ++G   +A+ +  EM   G+ PN  T  
Sbjct: 60  DTVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYN 119

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
            +I GYC  GK  +A +  R M E  + P++V F+ LI  FV+     G +E+   M   
Sbjct: 120 CMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRR 179

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE---- 403
            + P  ITYS++++ +     ++  K +FD M   G  PD    + L  G  R +     
Sbjct: 180 NIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIH 239

Query: 404 -------PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF---------- 446
                     A++L   MI +G  P++V   T+++G C +G +++A+E+F          
Sbjct: 240 GFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDL 299

Query: 447 ---------DKMCE----------------HGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
                    + MC+                +GV  ++ T+  L+  + +     RAE+I 
Sbjct: 300 DTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIY 359

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             M   G+ P   T+  + +        +EA++++  +
Sbjct: 360 LEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSM 397


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 224/445 (50%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++    G  + A A+ ++++  G KP LVTY ++L  L    R++    +   ++  G
Sbjct: 200 MVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACG 259

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   FN +I  F  +G +EEA+  + +M+   +TP   +++ LI  +   G+ + + 
Sbjct: 260 VAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAA 319

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           + L  M RE  + P+   Y +++  +C    + EA  V  +M A G  PDVVTYNT+   
Sbjct: 320 EYLREM-REFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNG 378

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +      AEE++ EM+  GV P+  T   +I GYC++G I++AL+F  T+ +  + P+
Sbjct: 379 LCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPD 438

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N LI G     D    +E+   M    + P+ +TYS ++++    G +D      D
Sbjct: 439 IVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLD 498

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   GI P+   Y+ + KGY R     K ++ L  M      P+++ + T+I G+  +G
Sbjct: 499 EMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEG 558

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M  A  +   M    V P+  T+  ++ G+S       A+ + + M A G+ P + T++
Sbjct: 559 KMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYM 618

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            +       G +K++ ++  ++  K
Sbjct: 619 SMINGHVVAGNSKKSFQLHDEMLQK 643



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 207/401 (51%), Gaps = 1/401 (0%)

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
           +F  + +++S++E+  + PD +  N +++A   +G++E AM     M   G+ P   TYN
Sbjct: 174 QFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYN 233

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           +++KG    G+ +++ ++   M   G V P++R++N+L+  +C    + EA     +M  
Sbjct: 234 SVLKGLLRNGRWDKAREVFRAMDACG-VAPDVRSFNMLIGGFCRAGELEEALRFYKEMRG 292

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
             + PDVV+++ +   + + GE D A E + EM   G+ P+G    ++I G+C+ G + E
Sbjct: 293 RRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLE 352

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           ALR    M  +G  P++V +N L+ G  +       +E+L  MKE  V PD+ T++T+++
Sbjct: 353 ALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIH 412

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +   G ++K  + FD +    ++PD   Y+ L  G  R+ +  KA EL   M      P
Sbjct: 413 GYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFP 472

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           N V ++ +I   C  G +D A    D+M   G+ PN+ T+ +++ GY  +    + ++ L
Sbjct: 473 NHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFL 532

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             M+   V P   T+  L       G   EA  +L  ++N+
Sbjct: 533 PKMRHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENE 573



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 195/388 (50%), Gaps = 1/388 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           VRS   L+      G+ +EA   +  +      P +V+++ L+   T +   +     + 
Sbjct: 264 VRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLR 323

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E G+ PD + +  VI  F  +G M EA+    +M   G  P   TYNTL+ G     
Sbjct: 324 EMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKER 383

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  ++ +LL+ M   G V P+L T+  L+  +C + NI +A      ++   ++PD+VTY
Sbjct: 384 RLSDAEELLNEMKERG-VPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTY 442

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+     + G+  +A E+  +M    + PN  T  I+I  +C++G++  A  F   M  
Sbjct: 443 NTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVN 502

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN++ +N +IKG+    +     + L  M+  +V PD+ITY+T+++ +   G M +
Sbjct: 503 KGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKMHE 562

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +   M    ++PDA  Y+++  G+      ++A+ +   M   G  P+   + ++I+
Sbjct: 563 AFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMIN 622

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           G    G+  ++ ++ D+M + G++P+ K
Sbjct: 623 GHVVAGNSKKSFQLHDEMLQKGLAPDDK 650



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 37/144 (25%), Positives = 71/144 (49%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +NK     + +   ++      G   + Q     +      P L+TY TL+     + + 
Sbjct: 501 VNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKM 560

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +   +++  +E   + PD++ +N +I+ FS  GNM+EA   + KM   G+ P   TY ++
Sbjct: 561 HEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSM 620

Query: 184 IKGYGIAGKPEESVKLLDLMSREG 207
           I G+ +AG  ++S +L D M ++G
Sbjct: 621 INGHVVAGNSKKSFQLHDEMLQKG 644



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/219 (21%), Positives = 90/219 (41%), Gaps = 35/219 (15%)

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV-------------------------- 349
           P   +F+LLI+ + +        E   L+ + RV                          
Sbjct: 87  PQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPIPAAASNALLAALSRAGWPHLTADA 146

Query: 350 -------NPDVITYS--TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
                  N +V TY+   +++++       +   +  +M K  + PD   ++++     R
Sbjct: 147 YRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFR 206

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
             + E A  L+ +M+  G  P +V + +++ G   +G  D+A EVF  M   GV+P++++
Sbjct: 207 AGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRS 266

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           F  L+ G+  A +   A    + M+   V P   +F  L
Sbjct: 267 FNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCL 305


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 225/439 (51%), Gaps = 42/439 (9%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L +      A+ +F  +I+ G KP  VTY T++  L   +  +    +  Q+ + G
Sbjct: 301 IIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKG 360

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD++ +  +I+   ++ +++ A   F +M + G+ P   TYN LI GY   G+ EE V
Sbjct: 361 VKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVV 420

Query: 198 K-------------------LLDLMSREG---------------NVKPNLRTYNVLVRAW 223
           +                   LLD + + G                +KP++  Y +++  +
Sbjct: 421 QRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGY 480

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
             +  ++E  ++++ M A+G+ P+   +NT+  AYA+    D+   + ++M+  G+ PN 
Sbjct: 481 GKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNV 540

Query: 284 RTCGIIISGYCKEGKIKEA-LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
            T G +I   CK G++ +A L+F + + E GV PN V+FN L+ G   +   + V+E+  
Sbjct: 541 VTYGTLIDALCKLGRVDDAVLQFNQMINE-GVTPNNVVFNSLVYGLCTVDKWEKVEELFL 599

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M    + PD++ ++T++      G + + + + D M   G+KPD  +Y+ L  G+    
Sbjct: 600 EMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFAS 659

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             ++A +LL  M+ +G  PN+V + T++ G+C  G +D A  +F +M   GV+P ++T+ 
Sbjct: 660 RMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYN 719

Query: 463 TLMWG------YSEARQPW 475
           T++ G      +SEAR+ +
Sbjct: 720 TILNGLFRSGRFSEARELY 738



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 214/437 (48%), Gaps = 8/437 (1%)

Query: 64  MNKESCRT-VRSMTKLMNSLIERGKPQEAQAIFNNLIEG---GHKPSLVTYTTLLAALTI 119
           M +  CR  V S   L+  L +R + +EA+ + + +++G      P +V+Y  ++     
Sbjct: 146 MPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFN 205

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
           + + +  +S+     E G+ PD + +N +I+   ++  ++ A D F +M E G+ P   T
Sbjct: 206 EGQVDKAYSLFL---EMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVT 262

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           YNT+I G   A + + +  +   M  +G VKP+  TYN ++   C  + +  A  V  +M
Sbjct: 263 YNTIIDGLCKAQEVDMAEGVFQKMVDKG-VKPSNVTYNTIIDGLCKAQAVDRAEGVFQQM 321

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
              G+KPD VTYNTI     +    D+AE V  +M   GV+P+  T  III G CK   +
Sbjct: 322 IDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSV 381

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
             A    + M + GV PN   +N LI G++     + V + +  M    + PDV TY  +
Sbjct: 382 DRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLL 441

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++     G  ++ + +FD M + GIKP    Y I+  GY ++    +  +LL  M+ +G 
Sbjct: 442 LDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGI 501

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            PN  IF T+I  +     +D  + +F KM + G+SPN+ T+ TL+    +  +   A  
Sbjct: 502 SPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVL 561

Query: 480 ILQIMKAFGVHPQKSTF 496
               M   GV P    F
Sbjct: 562 QFNQMINEGVTPNNVVF 578



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 215/422 (50%), Gaps = 7/422 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L +  +   A+ +F  +++ G KPS VTY T++  L   +  +    +  Q+ + G
Sbjct: 266 IIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRG 325

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +N +I+   ++  +++A   F +M + G+ P   TY  +I G   A   + + 
Sbjct: 326 VKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAE 385

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +   M  +G VKPN  TYN L+  + +     E    + +M+A  ++PDV TY  +   
Sbjct: 386 GVFQQMIDKG-VKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDY 444

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +NG+ ++A  +   M   G++P+    GI++ GY K+G + E       M   G+ PN
Sbjct: 445 LCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPN 504

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
             IFN +I  + +   R  +DEV+ +   MK+  ++P+V+TY T+++A    G +D    
Sbjct: 505 HRIFNTVICAYAK---RAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVL 561

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
            F+ M   G+ P+   ++ L  G     + EK EEL + M+  G  P++V F T++   C
Sbjct: 562 QFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLC 621

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +G +  A  + D M   G+ P++ ++ TL+ G+  A +   A ++L  M + G+ P   
Sbjct: 622 KEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIV 681

Query: 495 TF 496
           ++
Sbjct: 682 SY 683



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 211/452 (46%), Gaps = 22/452 (4%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL + L+   +P   +A+ N L+    +    + + L  +     RFN     M +   N
Sbjct: 29  KLFDELLLHARPASVRAL-NQLLSVVSRAKCSSSSKLAVS-----RFNR----MLRDCSN 78

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            + PD   ++ VI  F   G +E     F  + ++G        N L+KG     +  E+
Sbjct: 79  KVAPDCCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEA 138

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA---ASGMKPDVVTYNT 253
           + +L     E   +  + +YN L++  C+ +   EA  ++H M     S   PDVV+YN 
Sbjct: 139 MHVLLRQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNI 198

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +   G+ D+A  + +EM   GV P+  T   II G CK  ++  A    + M E G
Sbjct: 199 VINGFFNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKG 255

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V PN V +N +I G  +  + D  + V   M +  V P  +TY+TI++    A  +D+ +
Sbjct: 256 VKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAE 315

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F  M   G+KPD   Y+ +  G  + Q  +KAE +   MI+ G  P+ + +T II G 
Sbjct: 316 GVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGL 375

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH--- 490
           C   S+DRA  VF +M + GV PN  T+  L+ GY    Q W  EE++Q +K    H   
Sbjct: 376 CKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQ-W--EEVVQRIKEMSAHDLE 432

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+ LL +     G   EA+ +   +  K
Sbjct: 433 PDVFTYGLLLDYLCKNGKCNEARSLFDSMIRK 464



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 114/479 (23%), Positives = 220/479 (45%), Gaps = 36/479 (7%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T +++ L +      A+ +F  +I+ G KP+  TY  L+       ++  +   + ++
Sbjct: 367 TYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEM 426

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             + ++PD   +  +++   ++G   EA   F  M   G+ P+ + Y  ++ GYG  G  
Sbjct: 427 SAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGAL 486

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E   LL+LM   G + PN R +N ++ A+     I E  ++  KM   G+ P+VVTY T
Sbjct: 487 SEMHDLLNLMVANG-ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGT 545

Query: 254 IATAYAQNGEADQA-----------------------------------EEVIVEMEHNG 278
           +  A  + G  D A                                   EE+ +EM + G
Sbjct: 546 LIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQG 605

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           ++P+      ++   CKEG++ EA R   +M   G+ P+++ +N LI G       D   
Sbjct: 606 IRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAV 665

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           ++L  M    + P++++Y+T+++ +  AG +D    +F +M + G+ P    Y+ +  G 
Sbjct: 666 KLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGL 725

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            R     +A EL + MI+S    ++  ++ I+ G+C +   D A ++F  +C   +  ++
Sbjct: 726 FRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDI 785

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
            TF  ++ G  +  +   A ++   + A G+ P   T+ L+AE     G  +E   + S
Sbjct: 786 ITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFS 844



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 215/448 (47%), Gaps = 7/448 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + GK  EA+++F+++I  G KPS+  Y  +L     +   + +H +++ +  NG
Sbjct: 441 LLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANG 500

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   FN VI A+++   ++E M  F KMK+ GL+P   TY TLI      G+ +++V
Sbjct: 501 ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAV 560

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
              + M  EG V PN   +N LV   C      +   +  +M   G++PD+V +NT+   
Sbjct: 561 LQFNQMINEG-VTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCN 619

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G   +A  +I  M   G++P+  +   +I G+C   ++ EA++    M   G+ PN
Sbjct: 620 LCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPN 679

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
           +V +N L+ G+ +      +D    L +E     V P V TY+TI+N    +G   + +E
Sbjct: 680 IVSYNTLLHGYCK---AGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARE 736

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           ++ +M K+        YSI+  G+ +    ++A ++  ++       +++ F  +I G  
Sbjct: 737 LYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLF 796

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G  + A+++F  +  +G+ P++ T+  +     E       + +  +M+  G  P   
Sbjct: 797 KGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSH 856

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
               L       G    A   LSK+  K
Sbjct: 857 MLNALIRKLLDRGEIPRAGAYLSKLDEK 884



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 208/443 (46%), Gaps = 12/443 (2%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSIMSQVEENGMDPDSIF 144
           G+ +   A F  +++ G +   +    LL  L   KR   ++H ++ Q+ E G     + 
Sbjct: 98  GRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVS 157

Query: 145 FNAVINAFSESGNMEEAMDTFWKM---KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           +N ++    +    EEA +    M   ++S  +P   +YN +I G+   G+ +++  L  
Sbjct: 158 YNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLF- 216

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
               E  V P++ TYN ++   C  + +  A +V  +M   G+KP+ VTYNTI     + 
Sbjct: 217 ---LEMGVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKA 273

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
            E D AE V  +M   GV+P+  T   II G CK   +  A    + M + GV P+ V +
Sbjct: 274 QEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTY 333

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N +I G  +    D  + V   M +  V PD +TY+ I++    A  +D+ + +F  M  
Sbjct: 334 NTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMID 393

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G+KP+   Y+ L  GY+   + E+  + +  M      P+V  +  ++   C +G  + 
Sbjct: 394 KGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNE 453

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF--LLL 499
           A  +FD M   G+ P++  +  ++ GY +        ++L +M A G+ P    F  ++ 
Sbjct: 454 ARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVIC 513

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
           A A+RA  +  E   I  K+K +
Sbjct: 514 AYAKRA--MIDEVMHIFIKMKQQ 534



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 173/354 (48%), Gaps = 1/354 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++L + G+  +A   FN +I  G  P+ V + +L+  L    ++  +  +  ++   G
Sbjct: 546 LIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQG 605

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD +FFN V+    + G + EA      M   GL P   +YNTLI G+  A + +E+V
Sbjct: 606 IRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAV 665

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLLD M   G +KPN+ +YN L+  +C    I  A+ +  +M   G+ P V TYNTI   
Sbjct: 666 KLLDGMVSAG-LKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNG 724

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             ++G   +A E+ V M  +    +  T  II+ G+CK     EA +  +++    +  +
Sbjct: 725 LFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLD 784

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ FN++I G  +   ++   ++ A +    + P V+TY  I       G +++   +F 
Sbjct: 785 IITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFS 844

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            M K+G  P++H  + L +  +   E  +A   L  + E  F       + +IS
Sbjct: 845 VMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLIS 898



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 75/333 (22%), Positives = 153/333 (45%), Gaps = 1/333 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L    K ++ + +F  ++  G +P +V + T+L  L  + R      ++  +   G
Sbjct: 581 LVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMG 640

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD I +N +I+    +  M+EA+     M  +GL P   +YNTL+ GY  AG+ + + 
Sbjct: 641 LKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAY 700

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M R+G V P + TYN ++         +EA  +   M  S     + TY+ I   
Sbjct: 701 CLFREMLRKG-VTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDG 759

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + +N   D+A ++   +    +Q +  T  I+I G  K G+ ++A+     +   G+ P+
Sbjct: 760 FCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPS 819

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V + L+ +  +E    + +D + ++M++    P+    + ++      G + +      
Sbjct: 820 VVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLS 879

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
            + +     +A   S+L   + RE+  + A+ L
Sbjct: 880 KLDEKNFSLEASTTSMLISLFSREEYQQHAKSL 912



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 6/205 (2%)

Query: 61  SFCMNKESCRT-----VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLA 115
           ++C+ +E  R      V +   ++N L   G+  EA+ ++ N+I+     S+ TY+ +L 
Sbjct: 699 AYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILD 758

Query: 116 ALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTP 175
                  F+    I   +    +  D I FN +I+   + G  E+AMD F  +  +GL P
Sbjct: 759 GFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVP 818

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
           +  TY  + +     G  EE   L  +M + G   PN    N L+R   +   I  A   
Sbjct: 819 SVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTA-PNSHMLNALIRKLLDRGEIPRAGAY 877

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQ 260
           + K+       +  T + + + +++
Sbjct: 878 LSKLDEKNFSLEASTTSMLISLFSR 902



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/225 (20%), Positives = 94/225 (41%), Gaps = 1/225 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   L++   + G+   A  +F  ++  G  P + TY T+L  L    RF+    +  
Sbjct: 680 IVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYV 739

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + ++        ++ +++ F ++   +EA   F  +    L     T+N +I G    G
Sbjct: 740 NMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGG 799

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E+++ L   +   G V P++ TY ++      E ++ E   +   M  SG  P+    
Sbjct: 800 RKEDAMDLFAAIPANGLV-PSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHML 858

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
           N +       GE  +A   + +++         T  ++IS + +E
Sbjct: 859 NALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFSRE 903


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 219/445 (49%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L++  K +  + + + ++  G KP + T+  L+ AL    +      +M ++   G
Sbjct: 182 LLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYG 241

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   F  ++  F E GNM  A+    +M  +G   +  T N L+ GY   G+ EE +
Sbjct: 242 LSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVL 301

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             +D MS EG  +P+  T+N LV   C   ++  A  ++  M   G  PD+ TYN++   
Sbjct: 302 SFIDEMSNEG-FRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFG 360

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + GE ++A E++ +M      PN  T   +IS  CKE +++EA   AR +   G+ P+
Sbjct: 361 LCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPD 420

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  FN LI+G     +     E+   MK    +PD  TY+ ++++  + G +++   +  
Sbjct: 421 VCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLK 480

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M  +G   +   Y+ L  G+ + +  E+AEE+   M   G   NVV + T+I G C + 
Sbjct: 481 EMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNR 540

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ A ++ D+M   G+ P+  T+ +L+  +  A    +A +I+Q M + G  P   T+ 
Sbjct: 541 RVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYG 600

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L       G  + A R+L  ++ K
Sbjct: 601 TLILGLSKAGRVELASRLLRTVQLK 625



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 223/494 (45%), Gaps = 37/494 (7%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           ++ T LM   IE G    A  I   ++  G   S VT   L+     + R   + S + +
Sbjct: 247 KTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDE 306

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +   G  PD   FN+++N     G+++ A++    M + G  P   TYN+LI G    G+
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            EE+V++L+ M    +  PN  TYN L+   C E  + EA  +   + + G+ PDV T+N
Sbjct: 367 VEEAVEILNQMILR-DFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 425

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++            A E+  EM+  G  P+  T  ++I   C  G+++EAL   + M+  
Sbjct: 426 SLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESS 485

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G   N+V +N LI GF +    +  +E+   M+   ++ +V+TY+T+++       +++ 
Sbjct: 486 GCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEA 545

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            ++ D M   G+KPD   Y+ L   + R  + +KA +++ TM  +G  P+ V + T+I G
Sbjct: 546 AQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILG 605

Query: 433 WCSDGSMD-----------------------------------RAIEVFDKMCEHGVSPN 457
               G ++                                    A+ +F +M E G  P+
Sbjct: 606 LSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPD 665

Query: 458 LKTFETLMWGYSEARQPW-RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
             T++ +  G      P   A + L  M   G  P  S+FL+LAE   A  +     +++
Sbjct: 666 AVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLV 725

Query: 517 SKIKNKERTNEMEA 530
           +++  +   ++ E 
Sbjct: 726 NRVMKQANFSDSEV 739



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 194/406 (47%), Gaps = 3/406 (0%)

Query: 64  MNKESCRTVR-SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+ E  R  R +   L+N L   G  + A  I + +++ G  P + TY +L+  L     
Sbjct: 307 MSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGE 366

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 I++Q+      P+++ +N +I+   +   +EEA +    +   G+ P   T+N+
Sbjct: 367 VEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNS 426

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI+G  +      +++L + M  +G   P+  TYN+L+ + C+   + EA +++ +M +S
Sbjct: 427 LIQGLCLTNNHRLAMELFEEMKTKG-CHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESS 485

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G   +VVTYNT+   + +N   ++AEE+  EME  G+  N  T   +I G CK  +++EA
Sbjct: 486 GCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEA 545

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
            +    M   G+ P+   +N L+  F    D     +++  M      PD +TY T++  
Sbjct: 546 AQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILG 605

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
            S AG ++    +   +   G+      Y+ + K   RE+   +A  L   M+E G  P+
Sbjct: 606 LSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALFREKRTSEAVRLFREMMEKGDPPD 665

Query: 423 VVIFTTIISGWCSDGS-MDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            V +  +  G CS G  +  A++   +M + G  P+  +F  L  G
Sbjct: 666 AVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEG 711



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 188/386 (48%), Gaps = 8/386 (2%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P S+ +  V+    + G+         +MK +G      T+  LI+ Y      +E+V +
Sbjct: 103 PSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAV 162

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           +D+M  E  +K +  TYN L+    +   +     V  +M + G+KPDV T+N +  A  
Sbjct: 163 VDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALC 222

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +  +   A  ++ EM   G+ P+ +T   ++ G+ +EG +  ALR    M   G   + V
Sbjct: 223 RAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNV 282

Query: 320 IFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEI 375
             N+L+ G+     ++G ++EVL+ + E       PD  T+++++N     G +    EI
Sbjct: 283 TVNVLVHGYC----KEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEI 338

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            D M + G  PD   Y+ L  G  +  E E+A E+L  MI   F PN V + T+IS  C 
Sbjct: 339 LDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCK 398

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +  ++ A E+   +   G+ P++ TF +L+ G         A E+ + MK  G HP + T
Sbjct: 399 ENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFT 458

Query: 496 FLLLAEARRATGLTKEAKRILSKIKN 521
           + +L ++  + G  +EA  +L ++++
Sbjct: 459 YNMLIDSLCSRGRLEEALSLLKEMES 484



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 85/358 (23%), Positives = 162/358 (45%), Gaps = 2/358 (0%)

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
           W  K+    P++  Y  +++  G  G      ++L  M   G  +    T+ +L+ ++  
Sbjct: 94  WASKQPNFVPSSVIYEEVLRKLGKDGSFGSMRRVLQEMKHTG-CEIRRGTFLILIESYAK 152

Query: 226 EKNITEAWNVMHKMAAS-GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
            +   EA  V+  M    G+K D  TYN +        +    E V   M   G++P+  
Sbjct: 153 FELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSRGIKPDVT 212

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T  I+I   C+  +I+ A+     M  YG+ P+   F  L++GF+E  + +G   +   M
Sbjct: 213 TFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGALRIREQM 272

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
                    +T + +++ +   G +++     D+M   G +PD   ++ L  G  R    
Sbjct: 273 VAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHV 332

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           + A E+L  M++ GF P++  + ++I G C  G ++ A+E+ ++M     SPN  T+ TL
Sbjct: 333 KHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTL 392

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +    +  Q   A E+ +++ + G+ P   TF  L +    T   + A  +  ++K K
Sbjct: 393 ISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTK 450


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 214/415 (51%), Gaps = 1/415 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A  ++  +++   K S+VT+  ++  L  + ++      +  +E  G+ P+ + +N VIN
Sbjct: 201 AWFVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVIN 260

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            +   G  E A   F  MK+  L P   TYN+ I       + EE+  +L  +   G V 
Sbjct: 261 GYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLV- 319

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN  TYN L+   CN+ ++ +A+    +M   G+   V TYN +  A       ++AE++
Sbjct: 320 PNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDM 379

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           I EM   GV+P+  T  I I+GYC+ G  K+AL     M E  + P +  +  LI  F +
Sbjct: 380 IKEMREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGK 439

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
                  +E      +  + PD+I ++ +++     G +D+  ++  +M  A + PD   
Sbjct: 440 RNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVT 499

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           ++ L +GY RE++ E+A++LL  M E G  P+ + + T+ISG+   G M  A+EVFD+M 
Sbjct: 500 FNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEML 559

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
             G  P L T+  L+ GYS+  +   AEE+L+ M++ G+ P  ST+L + EA + 
Sbjct: 560 SLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKT 614



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 116/392 (29%), Positives = 209/392 (53%), Gaps = 3/392 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   ++N L   GK ++A+    ++   G KP++VTY T++    ++ +F +   I 
Sbjct: 216 SIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAASKIF 275

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +++  + PD   +N+ I+   +   +EEA     K+ ESGL P   TYN LI G    
Sbjct: 276 KTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGCCNK 335

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +++    D M   G V  ++ TYN+L+ A   EK I EA +++ +M   G++PDVVT
Sbjct: 336 GDLDKAFAYRDEMMNRGIV-ASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDVVT 394

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRFARTM 309
           YN     Y + G A +A  +  EM    ++P   T   +I  + K  ++ EA  +F +++
Sbjct: 395 YNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKKSI 454

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           KE G+ P++++FN LI G     + D   ++L  M   +V PD +T++T+M  +     +
Sbjct: 455 KE-GMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERKV 513

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           ++ K++ D+M + GIKPD  +Y+ L  GY +  + + A E+   M+  GF P ++ +  +
Sbjct: 514 EEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNAL 573

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
           I G+   G  D A E+  +M   G++P+  T+
Sbjct: 574 IQGYSKIGEADHAEELLREMQSKGITPDDSTY 605



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 180/361 (49%), Gaps = 1/361 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++N    RGK + A  IF  + +   KP   TY + ++ L  ++R      ++ 
Sbjct: 252 VVTYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLC 311

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E+G+ P+++ +NA+I+     G++++A     +M   G+  +  TYN LI    +  
Sbjct: 312 KLLESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEK 371

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE+  ++  M RE  V+P++ TYN+ +  +C   N  +A ++  +M    ++P V TY
Sbjct: 372 RIEEAEDMIKEM-REKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETY 430

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++   + +     +AEE   +    G+ P+      +I G+C  G I  A +  + M  
Sbjct: 431 TSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDN 490

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             V P+ V FN L++G+      +   ++L  MKE  + PD I+Y+T+++ +S  G M  
Sbjct: 491 AKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKD 550

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+FD+M   G  P    Y+ L +GY +  E + AEELL  M   G  P+   +  +I 
Sbjct: 551 ALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIE 610

Query: 432 G 432
            
Sbjct: 611 A 611



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 189/413 (45%), Gaps = 36/413 (8%)

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST--------------------YN 181
           ++ F+ +++A+ +    +EA++    MKE+ + P T T                    Y 
Sbjct: 147 TLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYE 206

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGN---------------VKPNLRTYNVLVRAWCNE 226
            ++K   I         +++++ REG                VKPN+ TYN ++  +C  
Sbjct: 207 EMVK-MNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLR 265

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
                A  +   M    +KPD  TYN+  +   +    ++A  V+ ++  +G+ PN  T 
Sbjct: 266 GKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTY 325

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             +I G C +G + +A  +   M   G+  ++  +NLLI         +  ++++  M+E
Sbjct: 326 NALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMRE 385

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             V PDV+TY+  +N +   G   K   +FD+M +  I+P    Y+ L   + +     +
Sbjct: 386 KGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSE 445

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           AEE     I+ G  P++++F  +I G C +G++DRA ++  +M    V P+  TF TLM 
Sbjct: 446 AEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQ 505

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           GY   R+   A+++L  MK  G+ P   ++  L       G  K+A  +  ++
Sbjct: 506 GYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEM 558



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 156/288 (54%), Gaps = 1/288 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++    +G   +A A  + ++  G   S+ TY  L+ AL ++KR      ++ ++ E G
Sbjct: 328 LIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKG 387

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++PD + +N  IN +   GN ++A+  F +M E  + PT  TY +LI  +G   +  E+ 
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE 447

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +      +EG + P++  +N L+   C   NI  A+ ++ +M  + + PD VT+NT+   
Sbjct: 448 EKFKKSIKEGML-PDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQG 506

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y +  + ++A++++ EM+  G++P+  +   +ISGY K G +K+AL     M   G  P 
Sbjct: 507 YCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPT 566

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
           L+ +N LI+G+ +I + D  +E+L  M+   + PD  TY  ++ A  T
Sbjct: 567 LLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKT 614



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 93/193 (48%), Gaps = 1/193 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV + T L++   +R +  EA+  F   I+ G  P ++ +  L+    +    +    ++
Sbjct: 426 TVETYTSLIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLL 485

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++   + PD + FN ++  +     +EEA     +MKE G+ P   +YNTLI GY   
Sbjct: 486 KEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKR 545

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  ++++++ D M   G   P L TYN L++ +        A  ++ +M + G+ PD  T
Sbjct: 546 GDMKDALEVFDEMLSLG-FDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDST 604

Query: 251 YNTIATAYAQNGE 263
           Y  +  A   N +
Sbjct: 605 YLYVIEAMKTNDD 617


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/438 (29%), Positives = 224/438 (51%), Gaps = 9/438 (2%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            +A + FN+++     PS+V +  L +AL   K + ++ S+  Q+E  G+  D +    +
Sbjct: 73  NDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTIL 132

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           IN F    +++       K+ + GL P   T++TLI G+ I GK   +++L D+M   G 
Sbjct: 133 INCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG- 191

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            KPN+ +Y+++++  C     TE   ++  M   G +PDVV YNTI     ++   ++A 
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            +  +M+  G+ P   T   +I G    G+ KEA      MK   + P+LV F++LI   
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLI--- 308

Query: 329 VEIMDRDG-VDE---VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
            +IM ++G V E   +L  M E  V PDV TY+T+MN +     + + +++F+ M   G 
Sbjct: 309 -DIMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGR 367

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            PD  ++SIL  GY + +  ++A++L   M   G  P+ V + T+ISG C       A E
Sbjct: 368 MPDVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEE 427

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           +F  M  +G  PNL T+  L+   S+     +A  + + M+  G+ P   T+ ++ +   
Sbjct: 428 LFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMC 487

Query: 505 ATGLTKEAKRILSKIKNK 522
             G  K+A+ + +++  K
Sbjct: 488 KYGKFKDARELFAELSVK 505



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 199/385 (51%), Gaps = 1/385 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+N     GK   A  +F+ ++  G+KP++ +Y+ ++  L    +   +  ++ 
Sbjct: 161 VITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVIKLLE 220

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++  G +PD + +N +++   +   + EA+  F KMK +G+ PT  TY +LI G    G
Sbjct: 221 HMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGLRNLG 280

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+  LL+ M + GN+ P+L  ++VL+   C E  ++EA  ++  M   G++PDV TY
Sbjct: 281 RWKEAFGLLNEM-KGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDVATY 339

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   Y    E  +A +V   M   G  P+  +  I+++GYCK  +I EA +    M  
Sbjct: 340 NTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKAKRIDEAKQLFDEMTH 399

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P+ V +N LI G  +       +E+   M      P+++TYS +++  S  G++D+
Sbjct: 400 RGLIPDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQ 459

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F  M  +G+KPD   Y+I+  G  +  + + A EL   +   G  PN  + T  I 
Sbjct: 460 AMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTID 519

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSP 456
           G C  G +D A + F +M +   SP
Sbjct: 520 GVCKGGLLDEAHKAFRQMEKDDCSP 544



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 184/400 (46%), Gaps = 36/400 (9%)

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
           N+ +A+  F  M  +   P+   +  L     +  K  ++V  L        +  ++ + 
Sbjct: 71  NINDALSAFNHMVNTNPLPSIVKFGELFSAL-VRMKHYKTVVSLSKQMEMAGISHDVLSL 129

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
            +L+  +C   ++   ++V+ K+   G++P+V+T++T+   +   G+  +A E+   M  
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF-------- 328
            G +PN  +  III G C+ GK  E ++    MK  G  P++VI+N ++           
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249

Query: 329 -VEI---MDRDGV--------------------DEVLALMKEFR---VNPDVITYSTIMN 361
            V I   M   G+                     E   L+ E +   + PD++ +S +++
Sbjct: 250 AVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLID 309

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                G + + + I   M + G++PD   Y+ L  GY    E  +A ++   MI  G  P
Sbjct: 310 IMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMP 369

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +V  F+ +++G+C    +D A ++FD+M   G+ P+  ++ TL+ G  +AR+P  AEE+ 
Sbjct: 370 DVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELF 429

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           + M + G  P   T+ +L +     G   +A  +   ++N
Sbjct: 430 KDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMEN 469



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/247 (28%), Positives = 125/247 (50%), Gaps = 1/247 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV + T L++ L   G+ +EA  + N +  G   P LV ++ L+  +  +   +    I+
Sbjct: 265 TVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVIL 324

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + E G++PD   +N ++N +     + EA   F  M   G  P   +++ L+ GY  A
Sbjct: 325 KTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDVFSFSILVNGYCKA 384

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + +E+ +L D M+  G + P+  +YN L+   C  +   EA  +   M ++G  P++VT
Sbjct: 385 KRIDEAKQLFDEMTHRGLI-PDTVSYNTLISGLCQARRPLEAEELFKDMHSNGYPPNLVT 443

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +    ++ G  DQA  +   ME++G++P+  T  I+I G CK GK K+A      + 
Sbjct: 444 YSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELS 503

Query: 311 EYGVHPN 317
             G+ PN
Sbjct: 504 VKGLQPN 510



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/428 (21%), Positives = 176/428 (41%), Gaps = 55/428 (12%)

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           +NI +A +  + M  +   P +V +  + +A  +         +  +ME  G+  +  + 
Sbjct: 70  RNINDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSL 129

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------VEIMD---- 333
            I+I+ +C+   +         + + G+ PN++ F+ LI GF         +E+ D    
Sbjct: 130 TILINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVA 189

Query: 334 ------------------RDG-VDEVLALMKEFRV---NPDVITYSTIMNAWSTAGFMDK 371
                             R G   EV+ L++  +V    PDV+ Y+TI++       +++
Sbjct: 190 RGYKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNE 249

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              IF  M   GI P    Y+ L  G       ++A  LL  M      P++V F+ +I 
Sbjct: 250 AVHIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLID 309

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             C +G +  A  +   M E GV P++ T+ TLM GY    +   A ++ ++M + G  P
Sbjct: 310 IMCKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMP 369

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI---------PVESLERL 542
              +F +L           EAK++  ++ ++    +  +   +         P+E+ E L
Sbjct: 370 DVFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEA-EEL 428

Query: 543 YHKEATTASYPNLLQIPNVVSS----DQKGSAAALKKGRMLLRDADSSLECSWFATTSMY 598
           + K+  +  YP     PN+V+     D       L +   L R  ++S       T ++ 
Sbjct: 429 F-KDMHSNGYP-----PNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIM 482

Query: 599 LSHSCKSG 606
           +   CK G
Sbjct: 483 IDGMCKYG 490



 Score = 48.1 bits (113), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 23/104 (22%), Positives = 49/104 (47%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L ++G   +A  +F  +   G KP LVTY  ++  +    +F     + +++   G
Sbjct: 447 LLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGKFKDARELFAELSVKG 506

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
           + P++      I+   + G ++EA   F +M++   +P     N
Sbjct: 507 LQPNNWVCTPTIDGVCKGGLLDEAHKAFRQMEKDDCSPAQGCIN 550


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/448 (28%), Positives = 223/448 (49%), Gaps = 7/448 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L   GK  +A  +F+ +I  G +P++VTY TL+  L      N+   ++  +
Sbjct: 139 TFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM 198

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+    PD + + ++I++  +   + EA + F KM   G++P   TY +LI       + 
Sbjct: 199 EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEW 258

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +    LL+ M     + P++  ++ +V A C E  ITEA +V+  M   G++P+VVTYN 
Sbjct: 259 KHVTTLLNQMI-NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 317

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +    E D+A +V   M HNG  PN  +   +I+GYCK  ++ +A      M +  
Sbjct: 318 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 377

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMD 370
           + PN V +N L+ G   +     + + +AL  E   +   PD+ TY  +++       +D
Sbjct: 378 LIPNTVTYNTLMHGLCHV---GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLD 434

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +   +  + + PD   Y+I+  G  R  E E A ++   +   G  PNV  +T +I
Sbjct: 435 EAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMI 494

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G C  G +D A ++F +M  +G SP+  T+ T+  G  + ++  RA ++LQ M A G  
Sbjct: 495 NGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFS 554

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSK 518
              ST  LL E      L +  K+ILS+
Sbjct: 555 ADVSTTTLLVEMLCDDKLDQSVKQILSE 582



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 206/461 (44%), Gaps = 52/461 (11%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A + FN ++     PS V +  LL ++   K++ ++ S+ +Q++  G+ PD    N +I
Sbjct: 50  DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 109

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N+F        A     K+ + GL P T+T+ T                           
Sbjct: 110 NSFCHLNRPGFAFSVLAKILKLGLQPDTATFTT--------------------------- 142

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
                    L+R  C E  I +A ++  KM   G +P+VVTY T+     + G  + A  
Sbjct: 143 ---------LIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIR 193

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           ++  ME    QP+      II   CK+ ++ EA      M   G+ P++  +  LI    
Sbjct: 194 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLC 253

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
            + +   V  +L  M   ++ PDV+ +ST+++A    G + +  ++ D M   G++P+  
Sbjct: 254 NLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVV 313

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+ L  G+  + E ++A ++  TM+ +G+ PNV+ + T+I+G+C    MD+A  +F++M
Sbjct: 314 TYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEM 373

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
           C+  + PN  T+ TLM G     +   A  +   M A G  P  +T+ +L +        
Sbjct: 374 CQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHL 433

Query: 510 KEAKRILSKIKNKE----------------RTNEMEAEEDI 534
            EA  +L  I+                   R  E+EA  DI
Sbjct: 434 DEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 474



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 203/440 (46%), Gaps = 1/440 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           +L+ S+ +  +     ++ N +   G  P + T   L+ +     R     S+++++ + 
Sbjct: 72  RLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKL 131

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G+ PD+  F  +I      G + +A+  F KM   G  P   TY TLI G    G    +
Sbjct: 132 GLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAA 191

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++LL  M  +GN +P++  Y  ++ + C ++ +TEA+N+  KM   G+ PD+ TY ++  
Sbjct: 192 IRLLRSM-EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIH 250

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           +     E      ++ +M ++ + P+      ++   CKEGKI EA      M   GV P
Sbjct: 251 SLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEP 310

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N+V +N L+ G     + D   +V   M      P+VI+Y+T++N +     MDK   +F
Sbjct: 311 NVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLF 370

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M +  + P+   Y+ L  G       + A  L   M+  G  P++  +  ++   C  
Sbjct: 371 EEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKK 430

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             +D A+ +   +    + P+++ +  ++ G   A +   A +I   + + G+ P   T+
Sbjct: 431 SHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTY 490

Query: 497 LLLAEARRATGLTKEAKRIL 516
            ++       GL  EA ++ 
Sbjct: 491 TIMINGLCRRGLLDEANKLF 510


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 223/454 (49%), Gaps = 1/454 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++ L +      A+ +  ++I+ G K  +VTY+T++  L   +  +    ++ 
Sbjct: 199 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQ 258

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G+ PD + +N +I+   ++  ++ A      M + G+ P   TYNT+I G   A 
Sbjct: 259 HMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQ 318

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + +  +L  M  + +VKP+++TYN L+  + +     E    + +M A G+ PDVVTY
Sbjct: 319 AVDRADGVLQHMI-DKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTY 377

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +     +NG+  +A ++   M   G++PN    GI++ GY   G I +       M  
Sbjct: 378 SLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVA 437

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN  IFN+++  + +    D    + + M +  ++PDV+TY  +++A    G +D 
Sbjct: 438 NGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDD 497

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
               F+ M   G+ P++  ++ L  G       EKAEEL   M + G  PNVV F TI+ 
Sbjct: 498 AVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMC 557

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             C++G +  A  + D M   GV PN+ ++ TL+ G+  A +   A ++L +M + G+ P
Sbjct: 558 NLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKP 617

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
              ++  L      TG    A  +  ++  K  T
Sbjct: 618 DLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVT 651



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/496 (25%), Positives = 243/496 (48%), Gaps = 7/496 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++ L +      A+ +  ++I+ G KP +VTY T++  L   +  +    ++ 
Sbjct: 269 VVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQ 328

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +  + PD   +N +I+ +  +G  +E +    +M   GL P   TY+ L+      G
Sbjct: 329 HMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNG 388

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  E+ K+   M R+G +KPN+  Y +L+  +     I +  +++  M A+G+ P+   +
Sbjct: 389 KCTEARKIFYCMIRKG-IKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF 447

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  AYA+    D+A  +   M  +G+ P+  T GI+I   CK G++ +A+     M  
Sbjct: 448 NIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMIN 507

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV PN V+FN L+ G   +   +  +E+   M +  V P+V+ ++TIM      G +  
Sbjct: 508 DGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMV 567

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            + + D M + G++P+  +Y+ L  G+      ++A +LL  M+  G  P+++ + T++ 
Sbjct: 568 AQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLR 627

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C  G +D A  +F +M   GV+P   T+ T++ G    R+   A+E+   M   G   
Sbjct: 628 GYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQW 687

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKE-RTNEMEAEEDIPVESLERLYHKEATT- 549
              T+ ++      T    EA +I   + +K+ R N +     I ++ L +   K+    
Sbjct: 688 DIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFT--IMIDVLFKGGRKKDAMD 745

Query: 550 --ASYPNLLQIPNVVS 563
             AS P+   +PNVV+
Sbjct: 746 LFASIPSHGLVPNVVT 761



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 124/452 (27%), Positives = 215/452 (47%), Gaps = 11/452 (2%)

Query: 71  TVRSMTKLMNSLIERGK----PQEAQAIFNNLIEGGH---KPSLVTYTTLLAALTIQKRF 123
           +VR+   L+N ++ R +     + A ++FN +        +P L TY+ L        R 
Sbjct: 48  SVRAFNHLLN-VVARARCSSTSELAVSLFNRMARACSNKVRPDLCTYSILTGCFCRLGRI 106

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK-MKESGLTPTTSTYNT 182
               +    + + G   + +  N ++N   ++  ++EAMD   + M E G  P   + NT
Sbjct: 107 EHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNT 166

Query: 183 LIKGYGIAGKPEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           L+KG     + EE+++LL  M+ +G  N  PN+ TYN ++   C  + +  A  V+  M 
Sbjct: 167 LLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMI 226

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
             G+K DVVTY+TI     +    D+AE V+  M   GV+P+  T   II G CK   + 
Sbjct: 227 DKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVD 286

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
            A    + M + GV P++V +N +I G  +    D  D VL  M +  V PD+ TY+ ++
Sbjct: 287 RAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLI 346

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           + + + G   +     ++M   G+ PD   YS+L     +  +  +A ++   MI  G  
Sbjct: 347 HGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIK 406

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PNV I+  ++ G+ + G++    ++ D M  +G+SPN   F  ++  Y++      A  I
Sbjct: 407 PNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHI 466

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
              M   G+ P   T+ +L +A    G   +A
Sbjct: 467 FSRMSQHGLSPDVVTYGILIDALCKLGRVDDA 498



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 216/475 (45%), Gaps = 36/475 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++ L +      A  +  ++I+   KP + TY  L+        +  +   + 
Sbjct: 304 VVTYNTIIDGLCKAQAVDRADGVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLE 363

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+DPD + ++ +++   ++G   EA   F+ M   G+ P  + Y  L+ GY   G
Sbjct: 364 EMYARGLDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARG 423

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              +   LLDLM   G + PN   +N+++ A+  +  I EA ++  +M+  G+ PDVVTY
Sbjct: 424 AIADLTDLLDLMVANG-ISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTY 482

Query: 252 NTIATAYAQNGEAD-----------------------------------QAEEVIVEMEH 276
             +  A  + G  D                                   +AEE+  EM  
Sbjct: 483 GILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWD 542

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            GV+PN      I+   C EG++  A R   +M+  GV PN++ +N LI G       D 
Sbjct: 543 QGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDE 602

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             ++L +M    + PD+I+Y T++  +   G +D    +F +M + G+ P A  YS + +
Sbjct: 603 AAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQ 662

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G    +   +A+EL + MI+SG   ++  +  I++G C    +D A ++F  +C   + P
Sbjct: 663 GLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRP 722

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
           N+ TF  ++    +  +   A ++   + + G+ P   T+ ++ +     GL  E
Sbjct: 723 NIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDE 777



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/446 (27%), Positives = 206/446 (46%), Gaps = 13/446 (2%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL + L+   +P   +A FN+L+    +    + + L  +L     FN     M++   N
Sbjct: 35  KLFDELLPHARPASVRA-FNHLLNVVARARCSSTSELAVSL-----FNR----MARACSN 84

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            + PD   ++ +   F   G +E     F  + ++G        N L+ G   A + +E+
Sbjct: 85  KVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEA 144

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG---MKPDVVTYNT 253
           + +L     E    PN+ + N L++  CNEK + EA  ++H MA  G     P+VVTYNT
Sbjct: 145 MDILLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNT 204

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           I     +    D+AE V+  M   GV+ +  T   II G CK   +  A    + M + G
Sbjct: 205 IIDGLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKG 264

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V P++V +N +I G  +    D  + VL  M +  V PDV+TY+TI++    A  +D+  
Sbjct: 265 VKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAD 324

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +   M    +KPD   Y+ L  GY+   E ++    L  M   G  P+VV ++ ++   
Sbjct: 325 GVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYL 384

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C +G    A ++F  M   G+ PN+  +  L+ GY+         ++L +M A G+ P  
Sbjct: 385 CKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNN 444

Query: 494 STFLLLAEARRATGLTKEAKRILSKI 519
             F ++  A     +  EA  I S++
Sbjct: 445 YIFNIVLCAYAKKAMIDEAMHIFSRM 470



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 193/421 (45%), Gaps = 36/421 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L + GK  EA+ IF  +I  G KP++  Y  LL     +     +  ++ 
Sbjct: 374 VVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLD 433

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  NG+ P++  FN V+ A+++   ++EAM  F +M + GL+P   TY  LI      G
Sbjct: 434 LMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLG 493

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +++V   + M  +G V PN   +N LV   C      +A  +  +M   G++P+VV +
Sbjct: 494 RVDDAVLKFNQMINDG-VTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFF 552

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NTI       G+   A+ +I  ME  GV+PN  +   +I G+C  G+  EA +    M  
Sbjct: 553 NTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVS 612

Query: 312 YGVHPNLVIFNLLIKGFVEI------------MDRDGVD----------------EVLAL 343
            G+ P+L+ ++ L++G+ +             M R GV                    + 
Sbjct: 613 VGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSE 672

Query: 344 MKEFRVNP-------DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            KE  +N        D+ TY+ I+N       +D+  +IF  +    ++P+   ++I+  
Sbjct: 673 AKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMID 732

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
              +    + A +L  ++   G  PNVV +  ++     +G +D    +F  M + G +P
Sbjct: 733 VLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTP 792

Query: 457 N 457
           +
Sbjct: 793 D 793



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 189/412 (45%), Gaps = 17/412 (4%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            EA  IF+ + + G  P +VTY  L+ AL    R +      +Q+  +G+ P+S+ FN++
Sbjct: 461 DEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSL 520

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           +         E+A + F++M + G+ P    +NT++      G+   + +L+D M R G 
Sbjct: 521 VYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVG- 579

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V+PN+ +YN L+   C      EA  ++  M + G+KPD+++Y+T+   Y + G  D A 
Sbjct: 580 VRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAY 639

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            +  EM   GV P   T   I+ G     +  EA      M + G   ++  +N+++ G 
Sbjct: 640 CLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGL 699

Query: 329 VEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            +    + VDE   + +      + P++IT++ +++     G      ++F  +   G+ 
Sbjct: 700 CKT---NCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLV 756

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P+   Y I+ K  ++E   ++ + L + M +SG  P+ V+   II      G + RA   
Sbjct: 757 PNVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAY 816

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
             K+ E   S    T   L+  +S       A+ +          P+K  FL
Sbjct: 817 LSKIDEMNFSLEASTTSLLISLFSREEYKNHAKSL----------PEKYLFL 858



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 151/339 (44%), Gaps = 44/339 (12%)

Query: 194 EESVKLLDLM---SREGNVKPNLRTYNVLVRAWCNEKN--ITEAWNVMHKMAASGMKPDV 248
           ++++KL D +   +R  +V+      NV+ RA C+  +      +N M +  ++ ++PD+
Sbjct: 31  DDALKLFDELLPHARPASVRAFNHLLNVVARARCSSTSELAVSLFNRMARACSNKVRPDL 90

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TY+                                   I+   +C+ G+I+        
Sbjct: 91  CTYS-----------------------------------ILTGCFCRLGRIEHGFAAFGL 115

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRD-GVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
           + + G   N V+ N L+ G  +    D  +D +L  M EF   P+V++ +T++       
Sbjct: 116 ILKTGWRVNEVVINQLLNGLCDAKRVDEAMDILLRRMPEFGCMPNVVSCNTLLKGLCNEK 175

Query: 368 FMDKCKEIFDDMGKAG---IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
            +++  E+   M + G     P+   Y+ +  G  + Q  ++AE +L  MI+ G   +VV
Sbjct: 176 RVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKLDVV 235

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            ++TII G C   ++DRA  V   M + GV P++ T+ T++ G  +A+   RAE +LQ M
Sbjct: 236 TYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAEGVLQHM 295

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
              GV P   T+  + +          A  +L  + +K+
Sbjct: 296 IDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKD 334



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/184 (21%), Positives = 77/184 (41%), Gaps = 6/184 (3%)

Query: 61  SFCMNKESCRT-----VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLA 115
           ++C+ +E  R        + + ++  L    +  EA+ ++ N+I+ G +  + TY  +L 
Sbjct: 638 AYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILN 697

Query: 116 ALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTP 175
            L      +    I   +    + P+ I F  +I+   + G  ++AMD F  +   GL P
Sbjct: 698 GLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVP 757

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
              TY  ++K     G  +E   L   M + G   P+    N ++R+      I  A   
Sbjct: 758 NVVTYCIMMKNIIQEGLLDEFDNLFLAMEKSG-CTPDSVMLNAIIRSLLGRGEIMRAGAY 816

Query: 236 MHKM 239
           + K+
Sbjct: 817 LSKI 820


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 224/461 (48%), Gaps = 6/461 (1%)

Query: 67  ESCRTVRSMTK---LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           E C  + S++    L+ SL+  G+  + +A F  L+  G +P    +  ++ A       
Sbjct: 114 EVCSPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDL 173

Query: 124 NSIHSIMSQV--EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
           +   +++ ++   E    PD+  +N VI     SG   +A+  F +M + G+ P   TYN
Sbjct: 174 DVALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYN 233

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           T+I G+   G  E   +L D M  +G  KPN+ TYNVL+   C    + E   +M +MA+
Sbjct: 234 TMIDGHVKGGDLEAGFRLRDQMLHDGP-KPNVVTYNVLLSGLCRTGRMDETRALMDEMAS 292

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
             M PD  TY+ +     + GE+     +  E    GV     TC I+++G CK+GK+ +
Sbjct: 293 HSMLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAK 352

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A +    +   G+ P  VI+N LI G+ ++ D  G   +   MK   + PD ITY+ ++N
Sbjct: 353 AKQVFEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 412

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                  + K +++  +M K+G+ P    ++ L   Y    + EK   +L  M + G   
Sbjct: 413 GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKS 472

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +V+ F +++  +C +G +  A+ + D M    V+PN + + +++  Y E+    +A  ++
Sbjct: 473 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLV 532

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           + MK  GV     T+ LL +    +    EA+ ++  ++N+
Sbjct: 533 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ 573



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 220/428 (51%), Gaps = 7/428 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++  ++ G  +    + + ++  G KP++VTY  LL+ L    R +   ++M ++  + 
Sbjct: 235 MIDGHVKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHS 294

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M PD   ++ + +  + +G  +  +  F +  + G+     T + L+ G    GK  ++ 
Sbjct: 295 MLPDGFTYSILFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAK 354

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++ +++   G V P    YN L+  +C  +++  A+ +  +M +  ++PD +TYN +   
Sbjct: 355 QVFEMLVHTGLV-PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING 413

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +     +AE++++EME +GV P+  T   +I  Y   G++++       M++ G+  +
Sbjct: 414 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 473

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKE 374
           ++ F  ++K F +      + E +A++ +     V P+   Y++I++A+  +G  ++   
Sbjct: 474 VISFGSVVKAFCK---NGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALL 530

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + + M  +G+      Y++L KG  R  + ++AEEL+ T+   G  P+VV + TIIS  C
Sbjct: 531 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 590

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
           + G  D+A+E+  +M ++G+ P L+T  TL+   + A +    E + Q M    V P  S
Sbjct: 591 NKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSS 650

Query: 495 TFLLLAEA 502
            + ++ +A
Sbjct: 651 IYGIMVDA 658



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 175/381 (45%), Gaps = 7/381 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L + L   G+ Q   ++F   ++ G      T + LL  L    +      +   +   G
Sbjct: 305 LFDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTG 364

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P ++ +N +IN + +  ++  A   F +MK   + P   TYN LI G     K E   
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLC---KLEMVT 421

Query: 198 KLLDL---MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           K  DL   M + G V P++ T+N L+ A+     + + + V+  M   G+K DV+++ ++
Sbjct: 422 KAEDLVMEMEKSG-VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSV 480

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             A+ +NG+  +A  ++ +M +  V PN +    II  Y + G  ++AL     MK  GV
Sbjct: 481 VKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGV 540

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
             ++V +NLL+KG       D  +E++  ++   + PDV++Y+TI++A    G  DK  E
Sbjct: 541 SASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALE 600

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +  +M K GI+P       L             E L   M+     P+  I+  ++  + 
Sbjct: 601 LLQEMNKYGIRPTLRTCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 660

Query: 435 SDGSMDRAIEVFDKMCEHGVS 455
              +  +   +  +M E G++
Sbjct: 661 RCENDSKVASLKKEMSEKGIA 681



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 173/379 (45%), Gaps = 1/379 (0%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++ +    G   +    F  +  +G  P T  +N +++    AG  + ++ +L  M R
Sbjct: 126 NLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGR 185

Query: 206 -EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
            EG   P+  +YNV++         ++A  V  +M   G+ P+ +TYNT+   + + G+ 
Sbjct: 186 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDL 245

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           +    +  +M H+G +PN  T  +++SG C+ G++ E       M  + + P+   +++L
Sbjct: 246 EAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSIL 305

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
             G     +   +  + A   +  V     T S ++N     G + K K++F+ +   G+
Sbjct: 306 FDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGL 365

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P    Y+ L  GY + ++   A  +   M      P+ + +  +I+G C    + +A +
Sbjct: 366 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAED 425

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           +  +M + GV P+++TF TL+  Y  A Q  +   +L  M+  G+     +F  + +A  
Sbjct: 426 LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 485

Query: 505 ATGLTKEAKRILSKIKNKE 523
             G   EA  IL  +  K+
Sbjct: 486 KNGKIPEAVAILDDMIYKD 504



 Score =  108 bits (271), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 132/244 (54%), Gaps = 1/244 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   L+++    G+ ++   + +++ + G K  ++++ +++ A     +     +I+
Sbjct: 438 SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAIL 497

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +    + P++  +N++I+A+ ESG+ E+A+    KMK SG++ +  TYN L+KG   +
Sbjct: 498 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRS 557

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + +E+ +L+  +  +G ++P++ +YN ++ A CN+ +  +A  ++ +M   G++P + T
Sbjct: 558 SQIDEAEELIYTLRNQG-LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 616

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            +T+ +A A  G     E +  +M H  V+P+    GI++  Y +     +     + M 
Sbjct: 617 CHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMS 676

Query: 311 EYGV 314
           E G+
Sbjct: 677 EKGI 680



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 41/170 (24%), Positives = 86/170 (50%), Gaps = 1/170 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++ IE G  ++A  +   +   G   S+VTY  LL  L    + +    ++  +   G
Sbjct: 515 IIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG 574

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +N +I+A    G+ ++A++   +M + G+ PT  T +TL+     AG+  +  
Sbjct: 575 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTCHTLVSALASAGRVHDME 634

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
            L   M  + NV+P+   Y ++V A+   +N ++  ++  +M+  G+  D
Sbjct: 635 CLYQQMLHK-NVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 224/458 (48%), Gaps = 9/458 (1%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C  V S   +++ + + G+ +EA  +   +   G+ P +++Y+T++         + +  
Sbjct: 243 CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK 302

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++  ++  G+ P+S  + ++I        + EA + F +M   G+ P T  Y TLI G+ 
Sbjct: 303 LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 362

Query: 189 IAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
             G    + K   ++ SR+  + P++ TY  ++  +C   ++ EA  + H+M   G++PD
Sbjct: 363 KRGDIRAASKFFYEMHSRD--ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 420

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
            VT+  +   Y + G    A  V   M   G  PN  T   +I G CKEG +  A     
Sbjct: 421 SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 480

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWS 364
            M + G+ PN+  +N ++ G  +      ++E + L+ EF    +N D +TY+T+M+A+ 
Sbjct: 481 EMWKIGLQPNIFTYNSIVNGLCK---SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 537

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
            +G MDK +EI  +M   G++P    +++L  G+      E  E+LL  M+  G  PN  
Sbjct: 538 KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 597

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            F +++  +C   ++  A  ++  MC  GV P+ KT+E L+ G+ +AR    A  + Q M
Sbjct: 598 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 657

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           K  G     ST+ +L +         EA+ +  +++ +
Sbjct: 658 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 177/380 (46%), Gaps = 42/380 (11%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++   +RG  + A   F  +      P ++TYT +++             +  ++  
Sbjct: 355 TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 414

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++PDS+ F  +IN + ++G+M++A      M ++G +P   TY TLI G    G  + 
Sbjct: 415 KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 474

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +LL  M + G ++PN+ TYN +V   C   NI EA  ++ +  A+G+  D VTY T+ 
Sbjct: 475 ANELLHEMWKIG-LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 533

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            AY ++GE D+A+E++ EM   G+QP   T  ++++G+C  G +++  +    M   G+ 
Sbjct: 534 DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 593

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMN----------A 362
           PN   FN L+K +     R+ +    A+ K+     V PD  TY  ++           A
Sbjct: 594 PNATTFNSLVKQYCI---RNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 650

Query: 363 WS--------------------TAGFMDK-----CKEIFDDMGKAGIKPDAHAYSILAKG 397
           W                       GF+ +      +E+FD M + G+  D   +   +  
Sbjct: 651 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDT 710

Query: 398 YVREQEPEKAEELLMTMIES 417
             + + P+   + +  +IE+
Sbjct: 711 KYKGKRPDTIVDPIDEIIEN 730



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 134/286 (46%)

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           V  +    G+  +V +YN +     Q G   +A  +++ ME  G  P+  +   +++GYC
Sbjct: 233 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 292

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           + G++ +  +    MK  G+ PN  I+  +I     I      +E  + M    + PD +
Sbjct: 293 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 352

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
            Y+T+++ +   G +    + F +M    I PD   Y+ +  G+ +  +  +A +L   M
Sbjct: 353 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 412

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
              G  P+ V FT +I+G+C  G M  A  V + M + G SPN+ T+ TL+ G  +    
Sbjct: 413 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 472

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
             A E+L  M   G+ P   T+  +      +G  +EA +++ + +
Sbjct: 473 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 518



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 129/274 (47%), Gaps = 3/274 (1%)

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG-KIKE 301
           G  P V  ++         G   +A  V  +M + G+  +  +C + ++   K+  K   
Sbjct: 172 GSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A+   R   E GV  N+  +N++I    ++        +L LM+     PDVI+YST++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +   G +DK  ++ + M + G+KP+++ Y  +     R  +  +AEE    MI  G  P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           + V++TT+I G+C  G +  A + F +M    ++P++ T+  ++ G+ +      A ++ 
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
             M   G+ P   TF  L       G  K+A R+
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRV 443



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 68/137 (49%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   LMN     G  ++ + + N ++  G  P+  T+ +L+    I+    +  +I 
Sbjct: 560 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 619

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   G+ PD   +  ++    ++ NM+EA   F +MK  G + + STY+ LIKG+   
Sbjct: 620 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 679

Query: 191 GKPEESVKLLDLMSREG 207
            K  E+ ++ D M REG
Sbjct: 680 KKFLEAREVFDQMRREG 696


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 223/437 (51%), Gaps = 13/437 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T LMN L   G+  EA A+ + ++E G +P+ +TY T++  +       S  +++ 
Sbjct: 177 VIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 236

Query: 132 QVEE-NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           ++EE + + P+ + ++A+I+   + G   +A + F +M+E G++P   TYN +I G+  +
Sbjct: 237 KMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSS 296

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+  E+ +LL  M  E  + P++ T++VL+ A   E    EA  + ++M   G+ P+ +T
Sbjct: 297 GRWSEAQRLLREMF-ERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTIT 355

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++   +++    D AE +   M   G  P+  T  I+I GYC   ++ + ++    M 
Sbjct: 356 YNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMS 415

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+  N + +  LI GF ++ + +   ++L  M    V P+V+T +T+++     G + 
Sbjct: 416 RRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLK 475

Query: 371 KCKEIFDDMGKA-----------GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
              E+F  M K+            ++PD   Y+IL  G + E +  +AEEL   M   G 
Sbjct: 476 DALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGL 535

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            P+ + + ++I G C    +D A ++FD M   G SP++ TF TL+ GY +  +     E
Sbjct: 536 VPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLE 595

Query: 480 ILQIMKAFGVHPQKSTF 496
           +   M   G+     T+
Sbjct: 596 VFCEMGRRGIVANAITY 612



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 213/417 (51%), Gaps = 12/417 (2%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +++ L + G+  +AQ +F+ + E G  P+L TY  ++       R++    ++ ++ E
Sbjct: 252 SAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFE 311

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             M PD + F+ +INA  + G   EA + + +M   G+ P T TYN++I G+    + + 
Sbjct: 312 RKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDA 371

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + ++  LM+ +G   P++ T+++L+  +C  K + +   ++H+M+  G+  + +TY T+ 
Sbjct: 372 AERMFYLMATKG-CSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLI 430

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY--- 312
             + Q G  + A +++ EM  +GV PN  TC  ++ G C  GK+K+AL   + M++    
Sbjct: 431 HGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMD 490

Query: 313 --------GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
                    V P++  +N+LI G +        +E+   M    + PD ITY+++++   
Sbjct: 491 LDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLC 550

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
               +D+  ++FD MG  G  PD   ++ L  GY +        E+   M   G   N +
Sbjct: 551 KQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAI 610

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            + T+I G+C  G+++ A+++F +M   GV P+  T   ++ G     +  RA + L
Sbjct: 611 TYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 208/436 (47%), Gaps = 15/436 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S T L+       K   A + F  + + G  PSLVT++TLL  L ++ R +       
Sbjct: 111 IYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFH 170

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ +    P+ I F  ++N     G + EA+    +M E GL P   TY T++ G    G
Sbjct: 171 QICK----PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 226

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++ LL  M     +KPN+  Y+ ++     +   T+A N+  +M   G+ P++ TY
Sbjct: 227 DTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTY 286

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   +  +G   +A+ ++ EM    + P+  T  ++I+   KEGK  EA      M  
Sbjct: 287 NCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLP 346

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN + +N +I GF +    D  + +  LM     +PDVIT+S +++ +  A  +D 
Sbjct: 347 RGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDD 406

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++  +M + G+  +   Y+ L  G+ +      A +LL  MI SG  PNVV   T++ 
Sbjct: 407 GMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLD 466

Query: 432 GWCSDGSMDRAIEVFDKMCE-----------HGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           G C++G +  A+E+F  M +           + V P+++T+  L+ G     +   AEE+
Sbjct: 467 GLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEEL 526

Query: 481 LQIMKAFGVHPQKSTF 496
            + M   G+ P   T+
Sbjct: 527 YEEMPHRGLVPDTITY 542



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/465 (24%), Positives = 220/465 (47%), Gaps = 10/465 (2%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL +   E     +A  +F  ++     P ++ +  LL  +   +R + + S+  ++E  
Sbjct: 46  KLQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFCKLLGVVVRMERPDVVISLHRKMEMR 105

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            +  +   F  +I  F     +  A+ TF K+ + G  P+  T++TL+ G  +  +  E+
Sbjct: 106 RIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEA 165

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +     +      KPN+  +  L+   C E  + EA  ++ +M   G++P+ +TY TI  
Sbjct: 166 LHFFHQIC-----KPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 220

Query: 257 AYAQNGEADQAEEVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              + G+   A  ++ +ME  + ++PN      II G  K+G+  +A      M+E G+ 
Sbjct: 221 GMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGIS 280

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PNL  +N +I GF           +L  M E +++PDV+T+S ++NA    G   + +E+
Sbjct: 281 PNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEEL 340

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           +++M   GI P+   Y+ +  G+ ++   + AE +   M   G  P+V+ F+ +I G+C 
Sbjct: 341 YNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCG 400

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              +D  +++  +M   G+  N  T+ TL+ G+ +      A ++LQ M + GV P   T
Sbjct: 401 AKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVT 460

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLE 540
              L +     G  K+A  +  K+  K +   M+ +   P   +E
Sbjct: 461 CNTLLDGLCNNGKLKDALEMF-KVMQKSK---MDLDASHPFNDVE 501



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 171/351 (48%), Gaps = 12/351 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+N+L++ GK  EA+ ++N ++  G  P+ +TY +++   + Q R ++   +  
Sbjct: 318 VVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFY 377

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  PD I F+ +I+ +  +  +++ M    +M   GL   T TY TLI G+   G
Sbjct: 378 LMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLG 437

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM------- 244
               ++ LL  M   G V PN+ T N L+   CN   + +A  +   M  S M       
Sbjct: 438 NLNAALDLLQEMISSG-VCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHP 496

Query: 245 ----KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
               +PDV TYN +       G+  +AEE+  EM H G+ P+  T   +I G CK+ ++ 
Sbjct: 497 FNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLD 556

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           EA +   +M   G  P++V F  LI G+ ++       EV   M    +  + ITY T++
Sbjct: 557 EATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLI 616

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           + +   G ++   +IF +M  +G+ PD      +  G   ++E ++A + L
Sbjct: 617 HGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 101/214 (47%), Gaps = 12/214 (5%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNL------IEGGH-----KPSLVTYTTLLAAL 117
           C  V +   L++ L   GK ++A  +F  +      ++  H     +P + TY  L+  L
Sbjct: 455 CPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGL 514

Query: 118 TIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT 177
             + +F+    +  ++   G+ PD+I +N+VI+   +   ++EA   F  M   G +P  
Sbjct: 515 INEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDV 574

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
            T+ TLI GY   G+  + +++   M R G V  N  TY  L+  +C   NI  A ++  
Sbjct: 575 VTFTTLINGYCKVGRVGDGLEVFCEMGRRGIV-ANAITYRTLIHGFCQVGNINGALDIFQ 633

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           +M +SG+ PD +T   + T      E  +A + +
Sbjct: 634 EMISSGVYPDTITIRNMLTGLWSKEELKRAVQCL 667


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 230/445 (51%), Gaps = 3/445 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L++ L    K  EA A+ + ++  G +P L TY T++  L  +   +   S++ ++
Sbjct: 188 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 247

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+  ++ + + +N +I+   +  +M++A D F KM+  G+ P   TYN+LI      G+ 
Sbjct: 248 EKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRW 307

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            ++ +LL D++ R+  + PN+ T+N L+ A+  E  + EA  +  +M    + P++VTYN
Sbjct: 308 SDASRLLSDMIERK--INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 365

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++   +  +   D+A+++   M      P+  T   +I G+CK  +++E +   R M + 
Sbjct: 366 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQR 425

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+  N V +N LI+G  +  D D   ++   M    V PD+ITYS +++     G ++K 
Sbjct: 426 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 485

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             +F+ + K+ ++P+ + Y+I+ +G  +  + E   +L  ++   G  PNV+I+TT+ISG
Sbjct: 486 LVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 545

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C  G  + A  +F +M E G  P+   + TL+           + E+++ M++ G    
Sbjct: 546 FCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 605

Query: 493 KSTFLLLAEARRATGLTKEAKRILS 517
            ST  ++        L K    +LS
Sbjct: 606 ASTISMVINMLHDGRLEKSYLEMLS 630



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 226/444 (50%), Gaps = 3/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N    R +   A A+   +++ G++P +VT ++LL      KR +   +++ Q+ E G
Sbjct: 122 LLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMG 181

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD++ FN +I+         EA+    +M   G  P   TY T++ G    G  + ++
Sbjct: 182 YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 241

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M + G ++ N+  YN ++   C  K++ +A+++ +KM   G+KPDV TYN++ + 
Sbjct: 242 SLLKKMEK-GKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLISC 300

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G    A  ++ +M    + PN  T   +I  + KEGK+ EA +    M +  + PN
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 360

Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +V +N LI GF  + DR D   ++  LM      PDV+TY+T++  +  A  +++  E+F
Sbjct: 361 IVTYNSLINGFC-MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELF 419

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M + G+  +   Y+ L +G  +  + + A+++   M+  G  P+++ ++ ++ G C  
Sbjct: 420 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 479

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +++A+ VF+ + +  + PN+ T+  ++ G  +A +     ++   +   GV P    +
Sbjct: 480 GKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 539

Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
             +       GL +EA  +  ++K
Sbjct: 540 TTMISGFCRKGLKEEADALFREMK 563



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 216/436 (49%), Gaps = 1/436 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +++ L+N      +  EA A+ + ++E G+KP  VT+ TL+  L +  + +   +++ 
Sbjct: 151 IVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALID 210

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  PD   +  V+N   + G+++ A+    KM++  +      YNT+I G     
Sbjct: 211 RMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYK 270

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +++  L + M  +G +KP++ TYN L+   CN    ++A  ++  M    + P+VVT+
Sbjct: 271 HMDDAFDLFNKMETKG-IKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF 329

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++  A+A+ G+  +AE++  EM    + PN  T   +I+G+C   ++ EA +    M  
Sbjct: 330 NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVS 389

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
               P++V +N LIKGF +    +   E+   M +  +  + +TY+T++     AG  D 
Sbjct: 390 KDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 449

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            ++IF  M   G+ PD   YSIL  G  +  + EKA  +   + +S   PN+  +  +I 
Sbjct: 450 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIE 509

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G ++   ++F  +   GV PN+  + T++ G+        A+ + + MK  G  P
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 569

Query: 492 QKSTFLLLAEARRATG 507
               +  L  AR   G
Sbjct: 570 DSGCYNTLIRARLRDG 585



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 218/427 (51%), Gaps = 6/427 (1%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A A+F  +++    PS++ ++ LL+A+    +F+ + S+  Q++  G+  +   ++
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            ++N F     +  A+    KM + G  P   T ++L+ GY    +  E+V L+D M   
Sbjct: 121 ILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMVEM 180

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  KP+  T+N L+         +EA  ++ +M A G +PD+ TY T+     + G+ D 
Sbjct: 181 G-YKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDL 239

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  ++ +ME   ++ N      II G CK   + +A      M+  G+ P++  +N LI 
Sbjct: 240 ALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNSLIS 299

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
                        +L+ M E ++NP+V+T++++++A++  G + + +++FD+M +  I P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDP 359

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           +   Y+ L  G+      ++A+++   M+     P+VV + T+I G+C    ++  +E+F
Sbjct: 360 NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELF 419

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            +M + G+  N  T+ TL+ G  +A     A++I + M + GV P   T+ +L +     
Sbjct: 420 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD----- 474

Query: 507 GLTKEAK 513
           GL K  K
Sbjct: 475 GLCKYGK 481



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 161/323 (49%), Gaps = 1/323 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L   G+  +A  + +++IE    P++VT+ +L+ A   + +      +  
Sbjct: 291 VFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 350

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +  +DP+ + +N++IN F     ++EA   F  M      P   TYNTLIKG+  A 
Sbjct: 351 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAK 410

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE ++L   MS+ G V  N  TYN L++      +   A  +  KM + G+ PD++TY
Sbjct: 411 RVEEGMELFREMSQRGLV-GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 469

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +     + G+ ++A  V   ++ + ++PN  T  I+I G CK GK+++      ++  
Sbjct: 470 SILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV PN++I+  +I GF     ++  D +   MKE    PD   Y+T++ A    G    
Sbjct: 530 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAA 589

Query: 372 CKEIFDDMGKAGIKPDAHAYSIL 394
             E+  +M   G   DA   S++
Sbjct: 590 SAELIKEMRSCGFVGDASTISMV 612



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 82/290 (28%), Positives = 148/290 (51%), Gaps = 1/290 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+++  + GK  EA+ +F+ +I+    P++VTY +L+    +  R +    I +
Sbjct: 326 VVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFT 385

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +      PD + +N +I  F ++  +EE M+ F +M + GL   T TYNTLI+G   AG
Sbjct: 386 LMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 445

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + + K+   M  +G V P++ TY++L+   C    + +A  V   +  S M+P++ TY
Sbjct: 446 DCDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTY 504

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     + G+ +   ++   +   GV+PN      +ISG+C++G  +EA    R MKE
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 564

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
            G  P+   +N LI+  +   D+    E++  M+      D  T S ++N
Sbjct: 565 DGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 614



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 163/347 (46%), Gaps = 2/347 (0%)

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N  SE   +++A+  F +M +S   P+   ++ L+       K +  + L + M   G +
Sbjct: 55  NGLSEL-KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLG-I 112

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
             N  TY++L+  +C    +  A  V+ KM   G +PD+VT +++   Y       +A  
Sbjct: 113 PHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVA 172

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           ++ +M   G +P+  T   +I G     K  EA+     M   G  P+L  +  ++ G  
Sbjct: 173 LVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLC 232

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +  D D    +L  M++ ++  +V+ Y+TI++       MD   ++F+ M   GIKPD  
Sbjct: 233 KRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVF 292

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+ L            A  LL  MIE   +PNVV F ++I  +  +G +  A ++FD+M
Sbjct: 293 TYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEM 352

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            +  + PN+ T+ +L+ G+    +   A++I  +M +    P   T+
Sbjct: 353 IQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 399



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 115/237 (48%), Gaps = 1/237 (0%)

Query: 55  QPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL 114
           + Q   +  ++K+    V +   L+    +  + +E   +F  + + G   + VTY TL+
Sbjct: 379 EAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLI 438

Query: 115 AALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT 174
             L      +    I  ++  +G+ PD I ++ +++   + G +E+A+  F  +++S + 
Sbjct: 439 QGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKME 498

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P   TYN +I+G   AGK E+   L   +S +G VKPN+  Y  ++  +C +    EA  
Sbjct: 499 PNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG-VKPNVIIYTTMISGFCRKGLKEEADA 557

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           +  +M   G  PD   YNT+  A  ++G+   + E+I EM   G   +  T  ++I+
Sbjct: 558 LFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 614


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 217/445 (48%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L+E  K +  +++++ +   G KP +VT+ TL+ AL    +  +   ++ ++   G
Sbjct: 152 LLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRG 211

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   F  ++  F E G++E A+    +M E G + T  T N LI GY   G+ E+++
Sbjct: 212 VAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDAL 271

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             +     +G  +P+  TYN  V   C   ++  A  VM  M   G  PDV TYN +   
Sbjct: 272 GYIQQEIADG-FEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNC 330

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +NG+ ++A+ ++ +M   G  P+  T   +I+  C   +++EAL  AR +   GV P+
Sbjct: 331 LCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPD 390

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  FN+LI    ++ D      +   MK     PD +TY+T+++   + G + K  ++  
Sbjct: 391 VYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLK 450

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM   G       Y+ +  G  ++   E+AEE+   M   G   N + F T+I G C D 
Sbjct: 451 DMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDK 510

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D A  + ++M   G+ PN  T+ +++  Y +     +A +IL+ M A G      T+ 
Sbjct: 511 KIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYG 570

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L       G T+ A ++L  ++ K
Sbjct: 571 TLINGLCKAGRTQVALKVLRGMRIK 595



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 208/450 (46%), Gaps = 2/450 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T LM   +E G  + A  +   ++E G   + VT   L+       R       + Q 
Sbjct: 218 TFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQE 277

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G +PD I +N  +N   ++ ++  A+     M + G  P   TYN ++      G+ 
Sbjct: 278 IADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQL 337

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           EE+  +L+ M   G + P++ T+N L+ A C    + EA ++  ++   G+ PDV T+N 
Sbjct: 338 EEAKGILNQMVDRGCL-PDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNI 396

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A  + G+   A  +  EM+++G  P+  T   +I   C  GK+ +AL   + M+  G
Sbjct: 397 LINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTG 456

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              + + +N +I G  + M  +  +EV   M    ++ + IT++T+++       +D   
Sbjct: 457 CPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAF 516

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            + + M   G++P+   Y+ +   Y ++ + +KA ++L TM  +GF  +VV + T+I+G 
Sbjct: 517 GLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGL 576

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G    A++V   M   G+ P  K +  ++           A  + + M   G  P  
Sbjct: 577 CKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDA 636

Query: 494 STFLLLAEAR-RATGLTKEAKRILSKIKNK 522
            T+ ++     R  G  KEA   + ++ +K
Sbjct: 637 LTYKIVFRGLCRGGGPIKEAFDFMLEMVDK 666



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/356 (21%), Positives = 152/356 (42%), Gaps = 3/356 (0%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           +      P    Y  +I+  G  G  +    L+  M REG+ +  L   +  + ++  ++
Sbjct: 65  LARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGH-QVKLGVVHSFLDSYEGQQ 123

Query: 228 NITEAWNVMHKMAAS--GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
              +A +++        G++ D V YN +     +  +    E V  EM   G++P+  T
Sbjct: 124 LFDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVT 183

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
              ++   C+  +++ A+     M   GV P+   F  L++GFVE    +    V A M 
Sbjct: 184 FNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARML 243

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           E   +   +T + ++N +   G ++            G +PD   Y+    G  +     
Sbjct: 244 EMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVG 303

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
            A +++  M++ G  P+V  +  +++  C +G ++ A  + ++M + G  P++ TF TL+
Sbjct: 304 HALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLI 363

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
                  +   A ++ + +   GV P   TF +L  A    G    A R+  ++KN
Sbjct: 364 AALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/270 (23%), Positives = 125/270 (46%), Gaps = 38/270 (14%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M    C R+  +   +++ L ++ + +EA+ +F+ +   G   + +T+ TL+  L   K+
Sbjct: 452 MESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKK 511

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    +++Q+   G+ P++I +N+++  + + G++++A D    M  +G      TY T
Sbjct: 512 IDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILETMTANGFEVDVVTYGT 571

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G   AG+ + ++K+L  M  +G ++P  + YN ++++     NI +A ++  +MA  
Sbjct: 572 LINGLCKAGRTQVALKVLRGMRIKG-MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAEV 630

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK-EGKIKE 301
           G  PD +TY                                    I+  G C+  G IKE
Sbjct: 631 GEPPDALTYK-----------------------------------IVFRGLCRGGGPIKE 655

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
           A  F   M + G  P    F +L +G + +
Sbjct: 656 AFDFMLEMVDKGFIPEFSSFRMLAEGLLNL 685



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 121/286 (42%), Gaps = 2/286 (0%)

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           +A     P    Y  I       G  D  + ++ EM   G Q         +  Y  +  
Sbjct: 65  LARDDFAPGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQL 124

Query: 299 IKEALRFARTMKE--YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
             +A+       +  +G+  + V++N L+   VE      ++ V + M    + PDV+T+
Sbjct: 125 FDDAVDLILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTF 184

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           +T+M A   A  +     + ++M   G+ PD   ++ L +G+V E   E A  +   M+E
Sbjct: 185 NTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLE 244

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G     V    +I+G+C  G ++ A+    +    G  P+  T+ T + G  +      
Sbjct: 245 MGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGH 304

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           A +++ +M   G  P   T+ ++       G  +EAK IL+++ ++
Sbjct: 305 ALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDR 350


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 226/415 (54%), Gaps = 2/415 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T ++N L+  G+  +A ++F+ +++ G  P +VTY+++++AL+  +  +    + +
Sbjct: 208 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFT 267

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +NG+ PD I + ++++ +  SG  +EA+  F KM   G+ P   TY  L+      G
Sbjct: 268 RMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNG 327

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  E+ K+ D + + G+ KP+  TY  L+  +  E  + E  +++  M   GM+     +
Sbjct: 328 KSTEARKIFDSLVKRGH-KPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIF 386

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N I  AYA++ + D+A  V   M   G+ P+    G ++   C  G++ +AL    ++K 
Sbjct: 387 NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKS 446

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN+V+F  LI G       D V+E+   M +  +  D I ++ IM      G + +
Sbjct: 447 EGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIE 506

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            K +FD M + GI+P+ + Y+ L  GY  + + ++A +LL  M+ +G  P+ V + TII+
Sbjct: 507 AKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIIN 566

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI-LQIMK 485
           G+  +G ++  + +  +M   GV+P + T+E L+ G  +A +   A+E+ L+++K
Sbjct: 567 GYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 621



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 227/448 (50%), Gaps = 11/448 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIE-GGHKP-SLVTYTTLLAALTIQKRFNSIHSIMS 131
           S T L+  L +    Q+A  + + + +  G  P  +V YTT++  L  + + +  +S+  
Sbjct: 173 SYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFD 232

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G  PD + ++++I+A S++  M++A   F +M ++G+ P    Y +L+ GY  +G
Sbjct: 233 AMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSG 292

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           KP+E++ +   M R G V+P++ TY  L+   C     TEA  +   +   G KPD  TY
Sbjct: 293 KPKEAIGIFKKMCRHG-VEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTY 351

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   YA  G   +  +++  M   G+Q       +I+  Y K  K+ EAL     M++
Sbjct: 352 GTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQ 411

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
            G++P++V +  ++    +I+   G VD+ L+     +   + P+++ ++T+++   T  
Sbjct: 412 QGLNPDIVNYGTVL----DILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCD 467

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
             DK +E+  +M   GI  D   ++ +     ++    +A+ L   M+  G  PN   + 
Sbjct: 468 KWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYN 527

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T+I G+C DG MD A+++   M  +GV P+  T+ T++ GYS+  +      +L+ M   
Sbjct: 528 TLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGK 587

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRI 515
           GV+P   T+ +L +     G T  AK +
Sbjct: 588 GVNPGIVTYEMLLQGLFQAGRTVAAKEL 615



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 207/445 (46%), Gaps = 15/445 (3%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL----TIQKRFNSIHSIMSQVEENGMDP- 140
           G+      +   + E G KP L +YT LL  L    T Q+  + +H IM+  +  G  P 
Sbjct: 150 GRAMRMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLH-IMA--DHKGRCPL 206

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           D + +  VIN     G +++A   F  M + G +P   TY+++I         +++ ++ 
Sbjct: 207 DVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVF 266

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
             M + G V P+   Y  LV  +C+     EA  +  KM   G++PDVVTY  +     +
Sbjct: 267 TRMVKNG-VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCK 325

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
           NG++ +A ++   +   G +P+  T G ++ GY  EG + E       M + G+     I
Sbjct: 326 NGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHI 385

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           FN+++  + +    + VDE L +    R   +NPD++ Y T+++   TAG +D     F+
Sbjct: 386 FNMIMGAYAK---HNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFN 442

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +   G+ P+   ++ L  G     + +K EEL   MI+ G   + + F  I+   C  G
Sbjct: 443 SLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKG 502

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +  A  +FD M   G+ PN  T+ TL+ GY    +   A ++L +M   GV P   T+ 
Sbjct: 503 RVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYN 562

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            +       G  ++   +L ++  K
Sbjct: 563 TIINGYSQNGRIEDGLTLLREMDGK 587



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 136/297 (45%), Gaps = 10/297 (3%)

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV--QPN---GRTCG 287
           +N M +  A+   P++ TY  +     + G  D A   +  +   G+  +PN     + G
Sbjct: 84  FNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQG 143

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
            + +   +  ++   L   R M E G  P+L  + +L+KG  +        ++L +M + 
Sbjct: 144 PLCTAGGRAMRMDIVL---RRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADH 200

Query: 348 --RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
             R   DV+ Y+T++N     G +DK   +FD M   G  PD   YS +     + Q  +
Sbjct: 201 KGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMD 260

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           KA ++   M+++G  P+ +++T+++ G+CS G    AI +F KMC HGV P++ T+  LM
Sbjct: 261 KATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALM 320

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
               +  +   A +I   +   G  P  +T+  L       G   E   +L  +  K
Sbjct: 321 DYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKK 377


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 226/415 (54%), Gaps = 2/415 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T ++N L+  G+  +A ++F+ +++ G  P +VTY+++++AL+  +  +    + +
Sbjct: 207 VVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFT 266

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +NG+ PD I + ++++ +  SG  +EA+  F KM   G+ P   TY  L+      G
Sbjct: 267 RMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNG 326

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  E+ K+ D + + G+ KP+  TY  L+  +  E  + E  +++  M   GM+     +
Sbjct: 327 KSTEARKIFDSLVKRGH-KPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIF 385

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N I  AYA++ + D+A  V   M   G+ P+    G ++   C  G++ +AL    ++K 
Sbjct: 386 NMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKS 445

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN+V+F  LI G       D V+E+   M +  +  D I ++ IM      G + +
Sbjct: 446 EGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIE 505

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            K +FD M + GI+P+ + Y+ L  GY  + + ++A +LL  M+ +G  P+ V + TII+
Sbjct: 506 AKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIIN 565

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI-LQIMK 485
           G+  +G ++  + +  +M   GV+P + T+E L+ G  +A +   A+E+ L+++K
Sbjct: 566 GYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMIK 620



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 226/450 (50%), Gaps = 15/450 (3%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKP----SLVTYTTLLAALTIQKRFNSIHSI 129
           S T L+  L +    Q+A  + +  I   HK      +V YTT++  L  + + +  +S+
Sbjct: 172 SYTILLKGLCDDKTSQQALDLLH--IMADHKGRCPLDVVAYTTVINGLLREGQLDKAYSL 229

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
              + + G  PD + ++++I+A S++  M++A   F +M ++G+ P    Y +L+ GY  
Sbjct: 230 FDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCS 289

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +GKP+E++ +   M R G V+P++ TY  L+   C     TEA  +   +   G KPD  
Sbjct: 290 SGKPKEAIGIFKKMCRHG-VEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDST 348

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY T+   YA  G   +  +++  M   G+Q       +I+  Y K  K+ EAL     M
Sbjct: 349 TYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNM 408

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWST 365
           ++ G++P++V +  ++    +I+   G VD+ L+     +   + P+++ ++T+++   T
Sbjct: 409 RQQGLNPDIVNYGTVL----DILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCT 464

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
               DK +E+  +M   GI  D   ++ +     ++    +A+ L   M+  G  PN   
Sbjct: 465 CDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNT 524

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           + T+I G+C DG MD A+++   M  +GV P+  T+ T++ GYS+  +      +L+ M 
Sbjct: 525 YNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMD 584

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
             GV+P   T+ +L +     G T  AK +
Sbjct: 585 GKGVNPGIVTYEMLLQGLFQAGRTVAAKEL 614



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 213/454 (46%), Gaps = 16/454 (3%)

Query: 78  LMNSLIERGKPQEAQAI-FNNLIEGGHKPSLVTYTTLLAAL----TIQKRFNSIHSIMSQ 132
           L+  L +R +  +A  I    + E G KP L +YT LL  L    T Q+  + +H IM+ 
Sbjct: 140 LLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLH-IMA- 197

Query: 133 VEENGMDP-DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  G  P D + +  VIN     G +++A   F  M + G +P   TY+++I       
Sbjct: 198 -DHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQ 256

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +++ ++   M + G V P+   Y  LV  +C+     EA  +  KM   G++PDVVTY
Sbjct: 257 AMDKATQVFTRMVKNG-VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTY 315

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     +NG++ +A ++   +   G +P+  T G ++ GY  EG + E       M +
Sbjct: 316 TALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMK 375

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            G+     IFN+++  + +    + VDE L +    R   +NPD++ Y T+++   TAG 
Sbjct: 376 KGMQLGHHIFNMIMGAYAK---HNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGR 432

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D     F+ +   G+ P+   ++ L  G     + +K EEL   MI+ G   + + F  
Sbjct: 433 VDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNA 492

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           I+   C  G +  A  +FD M   G+ PN  T+ TL+ GY    +   A ++L +M   G
Sbjct: 493 IMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNG 552

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           V P   T+  +       G  ++   +L ++  K
Sbjct: 553 VKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGK 586



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/438 (22%), Positives = 200/438 (45%), Gaps = 49/438 (11%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLA-------ALTIQKRFNSIHSIMSQVEENGMD 139
           +P +A  +F+ L++ G + S+      L+       A+ I     S+ + M +       
Sbjct: 42  EPGDAHQVFDRLLKRGDRASIFDLNRALSDVARASPAVAI-----SLFNRMPRAGATSAA 96

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P+   +  VI      G ++ A  T  ++  +GL  +   ++ L+KG     +  +++ +
Sbjct: 97  PNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILFSPLLKGLCDRRRTSDAMDI 156

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA------------------- 240
           +     E   KP+L +Y +L++  C++K   +A +++H MA                   
Sbjct: 157 VLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVING 216

Query: 241 ------------------ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
                               G  PDVVTY++I +A ++    D+A +V   M  NGV P+
Sbjct: 217 LLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPD 276

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
                 ++ GYC  GK KEA+   + M  +GV P++V +  L+    +        ++  
Sbjct: 277 CIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFD 336

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            + +    PD  TY T+++ ++T G + +  ++ D M K G++   H ++++   Y +  
Sbjct: 337 SLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHN 396

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           + ++A  +   M + G +P++V + T++   C+ G +D A+  F+ +   G++PN+  F 
Sbjct: 397 KVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFT 456

Query: 463 TLMWGYSEARQPWRAEEI 480
           TL+ G     +  + EE+
Sbjct: 457 TLIHGLCTCDKWDKVEEL 474


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 230/470 (48%), Gaps = 13/470 (2%)

Query: 69   CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
            C  V S   +++ + + G+  EA  +   +   G+ P +++Y+T++         + +  
Sbjct: 666  CWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWK 725

Query: 129  IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
            ++ ++++ G+ P+S  + ++I        + EA + F +M   G+ P T  Y TL+ G+ 
Sbjct: 726  LIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFC 785

Query: 189  IAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G    + K   ++ SR+  + P++ TY  ++  +C   ++ EA  + H+M   G++PD
Sbjct: 786  KRGDIRAASKFFYEMHSRD--ITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPD 843

Query: 248  VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
            ++T+  +   Y + G    A  V   M   G  PN  T   +I G CKEG +  A     
Sbjct: 844  IITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 903

Query: 308  TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWS 364
             M + G+ PN+  +N ++ G  +      ++E + L+ EF    +N D +TY+T+M+A+ 
Sbjct: 904  EMWKIGLQPNIFTYNSIVNGLCK---SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 960

Query: 365  TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             +G MDK +EI  +M   G++P    +++L  G+      E  E+LL  M+  G  PN  
Sbjct: 961  KSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 1020

Query: 425  IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
             F  ++  +C   ++  A  ++  MC  GV P+ KT+E L+ G+  AR    A  + Q M
Sbjct: 1021 TFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEM 1080

Query: 485  KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI 534
            K  G     ST+ +L +         EA+ I  ++    R + + A+++I
Sbjct: 1081 KGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM----RRDGLAADKEI 1126



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 211/432 (48%), Gaps = 1/432 (0%)

Query: 72   VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
            V S + ++N     G+  +   +   + + G KP+  TY +++  L    +        S
Sbjct: 704  VISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFS 763

Query: 132  QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++   G+ PD+I +  +++ F + G++  A   F++M    +TP   TY  +I G+   G
Sbjct: 764  EMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIG 823

Query: 192  KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               E+ KL   M   G ++P++ T+  L+  +C   +I +A+ V + M  +G  P+VVTY
Sbjct: 824  DMVEAGKLFHEMLCRG-LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTY 882

Query: 252  NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             T+     + G+ D A E++ EM   G+QPN  T   I++G CK G I+EA++     + 
Sbjct: 883  TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 942

Query: 312  YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             G++ + V +  L+  + +  + D   E+L  M    + P ++T++ +MN +   G ++ 
Sbjct: 943  AGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLED 1002

Query: 372  CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             +++ + M   GI P+A  ++ L K Y      + A  +   M   G  P+   +  ++ 
Sbjct: 1003 GEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVK 1062

Query: 432  GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            G C+  +M  A  +F +M   G S ++ T+  L+ G+ + ++   A EI   M+  G+  
Sbjct: 1063 GHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAA 1122

Query: 492  QKSTFLLLAEAR 503
             K  F   ++ +
Sbjct: 1123 DKEIFDFFSDTK 1134



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 191/386 (49%), Gaps = 2/386 (0%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G DP    F+       E G + EA   F KM   GL  +  + N  +           +
Sbjct: 595 GSDPR--VFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTAT 652

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
             ++     E  V  N+ +YN+++   C    I EA +++  M   G  PDV++Y+T+  
Sbjct: 653 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVIN 712

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y + GE D+  ++I +M+  G++PN  T G II   C+  K+ EA      M   G+ P
Sbjct: 713 GYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILP 772

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           + +++  L+ GF +  D     +    M    + PDV+TY+ I++ +   G M +  ++F
Sbjct: 773 DTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 832

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M   G++PD   ++ L  GY +    + A  +   MI++G  PNVV +TT+I G C +
Sbjct: 833 HEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 892

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +D A E+  +M + G+ PN+ T+ +++ G  ++     A +++   +A G++    T+
Sbjct: 893 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTY 952

Query: 497 LLLAEARRATGLTKEAKRILSKIKNK 522
             L +A   +G   +A+ IL+++  K
Sbjct: 953 TTLMDAYCKSGEMDKAQEILTEMLGK 978



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/380 (25%), Positives = 175/380 (46%), Gaps = 42/380 (11%)

Query: 76   TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
            T L++   +RG  + A   F  +      P ++TYT +++             +  ++  
Sbjct: 778  TTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLC 837

Query: 136  NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             G++PD I F  ++N + ++G++++A      M ++G +P   TY TLI G    G  + 
Sbjct: 838  RGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 897

Query: 196  SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
            + +LL  M + G ++PN+ TYN +V   C   NI EA  ++ +  A+G+  D VTY T+ 
Sbjct: 898  ANELLHEMWKIG-LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 956

Query: 256  TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             AY ++GE D+A+E++ EM   G+QP   T  ++++G+C  G +++  +    M   G+ 
Sbjct: 957  DAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 1016

Query: 316  PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMN----------A 362
            PN   FN L+K +     R+ +    A+ K+     V PD  TY  ++           A
Sbjct: 1017 PNATTFNCLVKQYC---IRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEA 1073

Query: 363  WS--------------------TAGFMDK-----CKEIFDDMGKAGIKPDAHAYSILAKG 397
            W                       GF  +      +EIFD M + G+  D   +   +  
Sbjct: 1074 WFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIFDFFSDT 1133

Query: 398  YVREQEPEKAEELLMTMIES 417
              + + P+   + +  +IE+
Sbjct: 1134 KYKGKRPDTIVDPIDEIIEN 1153


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 210/401 (52%), Gaps = 3/401 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS--IMSQVEENGMDPDSIF 144
           K  +A  +F  +++    PS+  +  LL+A+   K+F+ + S  ++ ++ + G +P  + 
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
            ++++N +     + +A+    +M E G  P T T+ TLI G  +  K  E+V L+D M 
Sbjct: 82  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           + G  +PNL TY V+V   C   +I  A+N+++KM A+ ++ DVV +NTI  +  +    
Sbjct: 142 QRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 200

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           D A  +  EME  G++PN  T   +IS  C  G+  +A +    M E  ++PNLV FN L
Sbjct: 201 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 260

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I  FV+       +++   M +  ++PD+ TY++++N +     +DK K++F+ M     
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            PD   Y+ L KG+ + +  E   EL   M   G   + V +TT+I G   DG  D A +
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 380

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           VF +M   GV P++ T+  L+ G     +  +A E+   M+
Sbjct: 381 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 421



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 222/444 (50%), Gaps = 1/444 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++ L    K  EA A+ + +++ G +P+LVTY  ++  L  +   +   ++++++
Sbjct: 116 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 175

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E   ++ D + FN +I++  +  ++++A++ F +M+  G+ P   TY++LI      G+ 
Sbjct: 176 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 235

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ +LL  M  E  + PNL T+N L+ A+  E    EA  +   M    + PD+ TYN+
Sbjct: 236 SDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 294

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +  +   D+A+++   M      P+  T   +I G+CK  ++++     R M   G
Sbjct: 295 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 354

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           +  + V +  LI+G     D D   +V   M    V PD++TYS +++     G ++K  
Sbjct: 355 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 414

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+FD M K+ IK D + Y+ + +G  +  + +   +L  ++   G  PNVV + T+ISG 
Sbjct: 415 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 474

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           CS   +  A  +  KM E G  P+  T+ TL+  +        + E+++ M++       
Sbjct: 475 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 534

Query: 494 STFLLLAEARRATGLTKEAKRILS 517
           ST  L+A       L K    +LS
Sbjct: 535 STIGLVANMLHDGRLDKSFLDMLS 558



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 217/437 (49%), Gaps = 1/437 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +++ L+N      +  +A A+ + ++E G++P  +T+TTL+  L +  + +   +++
Sbjct: 78  SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 137

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G  P+ + +  V+N   + G+++ A +   KM+ + +      +NT+I      
Sbjct: 138 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 197

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              ++++ L   M  +G ++PN+ TY+ L+   C+    ++A  ++  M    + P++VT
Sbjct: 198 RHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 256

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +N +  A+ + G+  +AE++  +M    + P+  T   +I+G+C   ++ +A +    M 
Sbjct: 257 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 316

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                P+L  +N LIKGF +    +   E+   M    +  D +TY+T++      G  D
Sbjct: 317 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 376

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             +++F  M   G+ PD   YSIL  G     + EKA E+   M +S    ++ I+TT+I
Sbjct: 377 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 436

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C  G +D   ++F  +   GV PN+ T+ T++ G    R    A  +L+ MK  G  
Sbjct: 437 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 496

Query: 491 PQKSTFLLLAEARRATG 507
           P   T+  L  A    G
Sbjct: 497 PDSGTYNTLIRAHLRDG 513



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 217/429 (50%), Gaps = 3/429 (0%)

Query: 93  AIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAF 152
           A+   +++ G++PS+VT ++LL      KR +   +++ Q+ E G  PD+I F  +I+  
Sbjct: 65  ALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGL 124

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
                  EA+    +M + G  P   TY  ++ G    G  + +  LL+ M     ++ +
Sbjct: 125 FLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM-EAAKIEAD 183

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
           +  +N ++ + C  +++ +A N+  +M   G++P+VVTY+++ +     G    A +++ 
Sbjct: 184 VVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLS 243

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           +M    + PN  T   +I  + KEGK  EA +    M +  + P++  +N LI GF  + 
Sbjct: 244 DMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFC-MH 302

Query: 333 DR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
           DR D   ++   M      PD+ TY+T++  +  +  ++   E+F +M   G+  D   Y
Sbjct: 303 DRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTY 362

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + L +G   + + + A+++   M+  G  P+++ ++ ++ G C++G +++A+EVFD M +
Sbjct: 363 TTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQK 422

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
             +  ++  + T++ G  +A +     ++   +   GV P   T+  +     +  L +E
Sbjct: 423 SEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQE 482

Query: 512 AKRILSKIK 520
           A  +L K+K
Sbjct: 483 AYALLKKMK 491



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 185/367 (50%), Gaps = 9/367 (2%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE--SVKLLDLMSREGNVKPNLRT 215
           +++A+  F  M +S   P+   +N L+       K +   S+ LL  M + G  +P++ T
Sbjct: 23  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLG-YEPSIVT 81

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
            + L+  +C+ K I++A  ++ +M   G +PD +T+ T+      + +A +A  ++  M 
Sbjct: 82  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
             G QPN  T G++++G CK G I  A      M+   +  ++VIFN +I    +     
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRH-- 199

Query: 336 GVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
            VD+ L L KE     + P+V+TYS++++   + G      ++  DM +  I P+   ++
Sbjct: 200 -VDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            L   +V+E +  +AE+L   MI+    P++  + ++I+G+C    +D+A ++F+ M   
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSK 318

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
              P+L T+ TL+ G+ ++++     E+ + M   G+     T+  L +     G    A
Sbjct: 319 DCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNA 378

Query: 513 KRILSKI 519
           +++  ++
Sbjct: 379 QKVFKQM 385



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 118/228 (51%), Gaps = 1/228 (0%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F ++K+    + +   L+    +  + ++   +F  +   G     VTYTTL+  L    
Sbjct: 314 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 373

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
             ++   +  Q+  +G+ PD + ++ +++    +G +E+A++ F  M++S +      Y 
Sbjct: 374 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 433

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           T+I+G   AGK ++   L   +S +G VKPN+ TYN ++   C+++ + EA+ ++ KM  
Sbjct: 434 TMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 492

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
            G  PD  TYNT+  A+ ++G+   + E+I EM       +  T G++
Sbjct: 493 DGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 540


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 122/377 (32%), Positives = 195/377 (51%), Gaps = 6/377 (1%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           P+++ +N VI  F   G ++ A++   +M+E  G+ P   TY TLI G+   G+ E++VK
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVK 204

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           + D M  +G V P+   YN L+  +C+   +  A      M   G+   V TYN +  A 
Sbjct: 205 VFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHAL 264

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
             +  A  A  V+ EM+ NG  P+  T  I+I+GYCKEG  K+AL     M + GV    
Sbjct: 265 FMDARASDAYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATA 324

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           V +  LI  F         D +  +  +  + PDV+ Y+ ++N+  T G M++  EI  +
Sbjct: 325 VTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAE 384

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M K  I PD   Y+ L +G+      ++A  L+  M + G  P++V + T+ISG+   G 
Sbjct: 385 MEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGD 444

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +  A+ V D+M + G +P L T+  L+ G  + RQ   AE +++ M A G+ P  ST++ 
Sbjct: 445 IKDALRVRDEMMDKGFNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYIS 504

Query: 499 LAEARRATGLTKEAKRI 515
           L E     GLT E +R+
Sbjct: 505 LIE-----GLTTEDERM 516



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 207/394 (52%), Gaps = 7/394 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L   GKP  A  +   +     +P+ VTY T++A    + R  +   +M ++ E G
Sbjct: 122 MLRHLCATGKPVRALELLRQM----PRPNAVTYNTVIAGFCARGRVQAALEVMREMRERG 177

Query: 138 -MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIAGKPEE 195
            + PD   +  +I+ + + G ME+A+  F +M   G + P+   YN LI GY   GK + 
Sbjct: 178 GIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVGKLDV 237

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +++  + M + G +   + TYN+L+ A   +   ++A+ V+ +M  +G  PDV TYN + 
Sbjct: 238 ALQYREDMVQRG-IAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYNILI 296

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             Y + G   +A EV  EM   GV+    T   +I  + ++G+++E  R      + G+ 
Sbjct: 297 NGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIR 356

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++V++N LI       D +   E++A M++ R+ PD +TY+T+M  +   G +D+ + +
Sbjct: 357 PDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTL 416

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            D+M K GI+PD  +Y+ L  GY  + + + A  +   M++ GF+P ++ +  +I G C 
Sbjct: 417 IDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQGLCK 476

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
               D A  +  +M   G++P+  T+ +L+ G +
Sbjct: 477 IRQGDDAENLMKEMVAKGITPDDSTYISLIEGLT 510



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 82/288 (28%), Positives = 159/288 (55%), Gaps = 1/288 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+    + GK   A     ++++ G   ++ TY  L+ AL +  R +  ++++ ++++NG
Sbjct: 225 LIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNG 284

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD   +N +IN + + GN ++A++ F +M + G+  T  TY +LI  +   G+ +E+ 
Sbjct: 285 FSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETD 344

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L ++  ++G ++P++  YN L+ + C   ++  A+ +M +M    + PD +TYNT+   
Sbjct: 345 RLFNVAVKKG-IRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRG 403

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           +   G  D+A  +I EM   G+QP+  +   +ISGY  +G IK+ALR    M + G +P 
Sbjct: 404 FCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPT 463

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
           L+ +N LI+G  +I   D  + ++  M    + PD  TY +++   +T
Sbjct: 464 LMTYNALIQGLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTT 511



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 179/366 (48%), Gaps = 11/366 (3%)

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A   F  +    L   T+T+N +++     GKP  +++LL  M R     PN  TYN ++
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMPR-----PNAVTYNTVI 154

Query: 221 RAWCNEKNITEAWNVMHKMAA-SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG- 278
             +C    +  A  VM +M    G+ PD  TY T+ + + + G  + A +V  EM   G 
Sbjct: 155 AGFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGE 214

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           V P+      +I GYC  GK+  AL++   M + G+   +  +NLL+      MD    D
Sbjct: 215 VAPSAVMYNALIGGYCDVGKLDVALQYREDMVQRGIAMTVATYNLLMHAL--FMDARASD 272

Query: 339 E--VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              VL  M++   +PDV TY+ ++N +   G   K  E+F++M + G++  A  Y+ L  
Sbjct: 273 AYAVLEEMQKNGFSPDVFTYNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIY 332

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
            + R+ + ++ + L    ++ G  P+VV++  +I+  C+ G M+RA E+  +M +  + P
Sbjct: 333 VFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPP 392

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +  T+ TLM G+    +   A  ++  M   G+ P   ++  L       G  K+A R+ 
Sbjct: 393 DDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVR 452

Query: 517 SKIKNK 522
            ++ +K
Sbjct: 453 DEMMDK 458



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 61/219 (27%), Positives = 119/219 (54%), Gaps = 1/219 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   + G  ++A  +F  + + G + + VTYT+L+   + + +      + +   + G
Sbjct: 295 LINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKG 354

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +NA+IN+    G+ME A +   +M++  + P   TYNTL++G+ + G+ +E+ 
Sbjct: 355 IRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEAR 414

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L+D M++ G ++P+L +YN L+  +  + +I +A  V  +M   G  P ++TYN +   
Sbjct: 415 TLIDEMTKRG-IQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQG 473

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
             +  + D AE ++ EM   G+ P+  T   +I G   E
Sbjct: 474 LCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTE 512



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 103/192 (53%), Gaps = 2/192 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+++  R T  + T L+     +G+ QE   +FN  ++ G +P +V Y  L+ +      
Sbjct: 315 MSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKKGIRPDVVMYNALINSHCTGGD 374

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
               + IM+++E+  + PD + +N ++  F   G ++EA     +M + G+ P   +YNT
Sbjct: 375 MERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEARTLIDEMTKRGIQPDLVSYNT 434

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY + G  ++++++ D M  +G   P L TYN L++  C  +   +A N+M +M A 
Sbjct: 435 LISGYSMKGDIKDALRVRDEMMDKG-FNPTLMTYNALIQGLCKIRQGDDAENLMKEMVAK 493

Query: 243 GMKPDVVTYNTI 254
           G+ PD  TY ++
Sbjct: 494 GITPDDSTYISL 505


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 219/418 (52%), Gaps = 5/418 (1%)

Query: 76  TKLMNSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           T  +N+ I+    +G+  +A    + L+  G     V+Y TL+  L       +   ++ 
Sbjct: 140 TITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLR 199

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +V+   +  D + ++ +I++  +  N+ +A D + +M    ++    TY+ LI G+ I G
Sbjct: 200 RVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVG 259

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K ++++ L + M+ E N+ P++ T+N+LV A+C E  + EA N +  M   G+KPD+VTY
Sbjct: 260 KLKDAIGLFNKMTSE-NINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTY 318

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++   Y    E + A+ ++  M H GV    R+  I+I+G+CK   + +A++  + M  
Sbjct: 319 NSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHH 378

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             + PN++ +N LI G  +        E++ LM +    PD+ITYS+I++A      +DK
Sbjct: 379 KQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDK 438

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +   +   GI+P+ + Y+IL  G  +    E A  +   ++  G++  V  +T +I 
Sbjct: 439 AIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQ 498

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           G+CS G  D A+ +  KM ++   P+  T+E ++    +  +  +AE++L+ M   G+
Sbjct: 499 GFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGL 556



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/466 (23%), Positives = 229/466 (49%), Gaps = 34/466 (7%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A ++FN L+     P  + +  +L +L   K ++++ S+  ++E  G+ P+ + FN +I
Sbjct: 53  DAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILI 112

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL---------- 199
           N F + G +  A     K+ + G  P T T NT IKG+ + G+  +++            
Sbjct: 113 NCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFH 172

Query: 200 ----------------------LDLMSR-EGN-VKPNLRTYNVLVRAWCNEKNITEAWNV 235
                                 L+L+ R +G  V+ ++  Y+ ++ + C +KN+ +A+++
Sbjct: 173 LDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDL 232

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
             +M +  +  ++VTY+ + + +   G+   A  +  +M    + P+  T  I++  +CK
Sbjct: 233 YSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCK 292

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           EG++KEA      M + G+ P++V +N L+ G+  + + +    +L  M    V   V +
Sbjct: 293 EGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRS 352

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+ ++N +     +D+  ++F +M    I P+   Y+ L  G  +      A EL+  M 
Sbjct: 353 YNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMH 412

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           + G  P+++ +++I+   C +  +D+AI +  K+ + G+ PN+ T+  L+ G  +  +  
Sbjct: 413 DRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLE 472

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            A  I + +   G +   +T+ ++ +   + GL  EA  +LSK+K+
Sbjct: 473 DARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKD 518



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/407 (23%), Positives = 174/407 (42%), Gaps = 36/407 (8%)

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            F  + ++ +A+  F  +     TP    +  ++     +      + L   M   G +K
Sbjct: 44  TFHNNNDVVDAVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRG-IK 102

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN   +N+L+  +C    I  A++V+ K+   G +PD +T NT    +   G+  QA   
Sbjct: 103 PNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNF 162

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART---------------------- 308
             ++   G   +  + G +I+G CK G+ + AL   R                       
Sbjct: 163 HDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCK 222

Query: 309 -------------MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
                        M    +  N+V ++ LI GF  +        +   M    +NPDV T
Sbjct: 223 DKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYT 282

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           ++ +++A+   G + + K     M K GIKPD   Y+ L  GY    E   A+ +L TM 
Sbjct: 283 FNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMS 342

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G    V  +  +I+G+C    +D+A+++F +M    + PN+ T+ +L+ G  ++ +  
Sbjct: 343 HRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRIS 402

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            A E++ +M   G  P   T+  + +A     L  +A  +L K+K++
Sbjct: 403 YALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQ 449



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/329 (22%), Positives = 150/329 (45%), Gaps = 1/329 (0%)

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++V L + + R+    P++  +  ++ +    K+     ++  KM   G+KP+ V +N +
Sbjct: 53  DAVSLFNCLLRQNPTPPDME-FGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNIL 111

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              + Q G    A  V+ ++   G +P+  T    I G+C +G+I +AL F   +   G 
Sbjct: 112 INCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGF 171

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
           H + V +  LI G  ++ +     E+L  +    V  DV+ YSTI+++      ++   +
Sbjct: 172 HLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFD 231

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           ++ +M    I  +   YS L  G+    + + A  L   M     +P+V  F  ++  +C
Sbjct: 232 LYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFC 291

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +G +  A      M + G+ P++ T+ +LM GY    +   A+ IL  M   GV     
Sbjct: 292 KEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVR 351

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNKE 523
           ++ ++        +  +A ++  ++ +K+
Sbjct: 352 SYNIVINGFCKIKMVDQAMKLFKEMHHKQ 380



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/210 (25%), Positives = 108/210 (51%), Gaps = 3/210 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TVRS   ++N   +     +A  +F  +      P+++TY +L+  L    R +    ++
Sbjct: 349 TVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELI 408

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + + G  PD I ++++++A  ++  +++A+    K+K+ G+ P   TY  LI G    
Sbjct: 409 DLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKG 468

Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           G+ E++  +  DL+ +  N+  N  TY V+++ +C+     EA +++ KM  +   PD +
Sbjct: 469 GRLEDARNIFEDLLVKGYNLTVN--TYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAI 526

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           TY  I  +     E D+AE+++ EM   G+
Sbjct: 527 TYEIIICSLFDKDENDKAEKLLREMITRGL 556



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 115/268 (42%), Gaps = 1/268 (0%)

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +++T  T +  N   D        +  N   P+    G I+    K       L   + M
Sbjct: 38  SFSTSTTFHNNNDVVDAVSLFNCLLRQNPTPPDMEF-GQILGSLVKSKHYHTVLSLFQKM 96

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +  G+ PN V FN+LI  F ++        VLA + +    PD IT +T +  +   G +
Sbjct: 97  EYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQI 156

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +     D +   G   D  +Y  L  G  +  E   A ELL  +       +VV+++TI
Sbjct: 157 HQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTI 216

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I   C D +++ A +++ +M    +S N+ T+  L+ G+    +   A  +   M +  +
Sbjct: 217 IDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENI 276

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILS 517
           +P   TF +L +A    G  KEAK  L+
Sbjct: 277 NPDVYTFNILVDAFCKEGRVKEAKNGLA 304



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/313 (20%), Positives = 142/313 (45%), Gaps = 47/313 (15%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L + G+   A  + + + + G +P ++TY+++L AL      +   +++ 
Sbjct: 385 VITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLI 444

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++++ G+ P+   +  +I+   + G +E+A + F  +   G   T +TY  +I+G+   G
Sbjct: 445 KLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHG 504

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E++ LL  M ++ +  P+  TY +++ +  ++    +A  ++ +M   G+    + Y
Sbjct: 505 LFDEALSLLSKM-KDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEY 563

Query: 252 NT------IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG-YCKEGKIKEALR 304
            +       A A+  N ++ Q             Q +G    +++   YC      + + 
Sbjct: 564 GSWSLSFMAAPAHFLNNDSLQC---------TSSQESGNWAKLLLERIYC------DCVL 608

Query: 305 FARTMKEYGVH-PNLVIFN-----------------LLIKGFVEIMDRDGVDEVLALMKE 346
               M++  V  P+++I++                 ++I+GF         DE LAL+ +
Sbjct: 609 TKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGFCS---HGLFDESLALLSK 665

Query: 347 FRVN---PDVITY 356
             VN   PD +TY
Sbjct: 666 MEVNGCIPDAVTY 678


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 225/463 (48%), Gaps = 42/463 (9%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+N L    + +E  A F  ++  G+ P++VTY TL+  L ++ R +    +  ++
Sbjct: 106 TLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM 165

Query: 134 EENGMDPDSIFFNAVINAFSESGNM----------------------------------- 158
           ++ G  PD + +  +I     +GN+                                   
Sbjct: 166 QKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGL 225

Query: 159 ------EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
                 +EA   F +MK  G+ P+  +YN+LI G+  AGK EES +LLD M  +G ++P+
Sbjct: 226 CKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG-LQPD 284

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
           + T+NVL+   C E  + EA  ++  M  SG+ PD+VTYN++   +   G+ + A E+ V
Sbjct: 285 MVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFV 344

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
            M   G +P+  +  ++I+GY K  K++EA++    M   G  PN++ ++ L+KG     
Sbjct: 345 SMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAG 404

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
             D   ++ ++MK   +  +  TY   ++       + +  ++F ++  +  K +    +
Sbjct: 405 KVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLN 464

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            L  G  +  + E A EL   +   G  PNVV +T +I G+C +G +D+A  +  KM  +
Sbjct: 465 CLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEAN 524

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           G +P++ T+ TLM G+ E+ +     ++L  M    V P   T
Sbjct: 525 GCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAIT 567



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 223/493 (45%), Gaps = 40/493 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ S   L++ L +     +  +++N +   G      T   LL  L    R     +  
Sbjct: 68  SLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLNCLCNVNRLREGFAAF 127

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + +   G  P+ + +N +I        + EA   F +M++ G TP   TY TLIKG    
Sbjct: 128 AGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGT 187

Query: 191 GKPEESVKL----LDLMSR-EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G    ++KL    L+ +SR E N KPN+ TYN++V   C      EA  +  +M   GM 
Sbjct: 188 GNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMI 247

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P +++YN++   +   G+ ++++ ++ EM   G+QP+  T  ++I   CKEGK+ EA + 
Sbjct: 248 PSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 307

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS- 364
              M E G+ P+LV +N LI+GF  + D +   E+   M      PDVI+Y+ ++N +S 
Sbjct: 308 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSK 367

Query: 365 ----------------------------------TAGFMDKCKEIFDDMGKAGIKPDAHA 390
                                              AG +D  K++F  M   GI  +++ 
Sbjct: 368 TLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYT 427

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y I   G  +     +A +L   +  S F   +     +I G C  G ++ A E+F+K+ 
Sbjct: 428 YGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLS 487

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
             G  PN+ T+  ++ G+    Q  +A  ++Q M+A G  P   T+  L      +   +
Sbjct: 488 NEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLE 547

Query: 511 EAKRILSKIKNKE 523
           E  ++L ++  K+
Sbjct: 548 EVVQLLHRMAQKD 560



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 90/382 (23%), Positives = 183/382 (47%), Gaps = 2/382 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L + G+  EA+ +F  +   G  PS+++Y +L+       ++     ++ ++ + G
Sbjct: 221 IVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG 280

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + FN +I+   + G + EA      M ESG+ P   TYN+LI+G+ + G    + 
Sbjct: 281 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAR 340

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L   M  +G  +P++ +YNVL+  +     + EA  + ++M   G +P+V+TY+++   
Sbjct: 341 ELFVSMPSKG-CEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKG 399

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G+ D A+++   M+ +G+  N  T GI + G CK   + EA++    +K       
Sbjct: 400 IFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLE 459

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +   N LI G  +    +   E+   +      P+V+TY+ +++ +   G +DK   +  
Sbjct: 460 IENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQ 519

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G  PD   Y+ L +G+    + E+  +LL  M +    P+ +  + ++     D 
Sbjct: 520 KMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDE 579

Query: 438 SMDRAIEVFDKM-CEHGVSPNL 458
                + +  +   + GV  +L
Sbjct: 580 KYQECLHLLPRFPIQKGVDKHL 601



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 177/410 (43%), Gaps = 79/410 (19%)

Query: 154 ESGNME--EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP 211
           ++GN+    A+  F  M  S  TP+ S++N L+ G        +   L + M   G +  
Sbjct: 44  KTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSG-LSS 102

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           +  T N+L+   CN   + E +     +   G  P++VTYNT+                 
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTL----------------- 145

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV-- 329
                             I G C E +I EA R    M++ G  P++V +  LIKG    
Sbjct: 146 ------------------IKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGT 187

Query: 330 -----------EIMDR-------------------DGV------DEVLALMKEFRVN--- 350
                      E+++                    DG+      DE   L +E +     
Sbjct: 188 GNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMI 247

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P +I+Y+++++ +  AG  ++ K + D+M   G++PD   +++L     +E +  +A++L
Sbjct: 248 PSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 307

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           L  MIESG  P++V + ++I G+C  G ++ A E+F  M   G  P++ ++  L+ GYS+
Sbjct: 308 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSK 367

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
             +   A ++   M   G  P   T+  L +     G   +AK++ S +K
Sbjct: 368 TLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMK 417



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/374 (21%), Positives = 164/374 (43%), Gaps = 18/374 (4%)

Query: 224 CNEKNIT--EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
           C   N+T   A +  H M  S   P + ++N + +  A+     Q   +  +M  +G+  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T  I+++  C   +++E       +   G  PN+V +N LIKG            + 
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKC----KEIFDDMGKAGI--KPDAHAYSILA 395
             M++    PDV+TY T++      G ++      +E+ +D+ +  I  KP+   Y+I+ 
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G  +    ++A++L   M   G  P+++ + ++I G+C  G  + +  + D+M + G+ 
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P++ TF  L+    +  +   A+++L +M   G+ P   T+  L E     G    A+ +
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 342

Query: 516 LSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQI---PNVVSSDQKGSAAA 572
              + +K    ++    ++ +    +    E     Y  +L +   PNV++ D      +
Sbjct: 343 FVSMPSKGCEPDV-ISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYD------S 395

Query: 573 LKKGRMLLRDADSS 586
           L KG  L    D +
Sbjct: 396 LLKGIFLAGKVDDA 409



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 108/238 (45%), Gaps = 8/238 (3%)

Query: 293 YCKEGKIK--EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
           +CK G +    AL F   M      P+L  FN L+ G  +I     V  +   M+   ++
Sbjct: 42  HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS 101

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
            D  T + ++N       + +    F  + + G  P+   Y+ L KG   E    +A  L
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC------EHGVSPNLKTFETL 464
            + M + G  P+VV + T+I G C  G+++ A+++  +M       E    PN+ T+  +
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           + G  +  +   A+++ + MK  G+ P   ++  L       G  +E+KR+L ++ ++
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQ 279



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 68/129 (52%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + ++  L++ L + GK + A  +F  L   GH+P++VTYT ++     + + +  + ++ 
Sbjct: 460 IENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQ 519

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++E NG  PD I +N ++  F ES  +EE +    +M +  ++P   T + ++       
Sbjct: 520 KMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDE 579

Query: 192 KPEESVKLL 200
           K +E + LL
Sbjct: 580 KYQECLHLL 588


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 219/419 (52%), Gaps = 7/419 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++T  +     +G+  +A    + +I  G     V+Y TL+  L       +   ++ + 
Sbjct: 265 TLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRN 324

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +   + PD + +N +I+   +  ++ +A D + +     + P   TYN LI G+ I GK 
Sbjct: 325 DGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKL 384

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++++ L + M+ + N+ P++ T+++LV  +C + NI EA NV+  M    +KPDVVTY++
Sbjct: 385 KDAIDLFNKMTSK-NIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSS 443

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    E ++AE +   M H GV  N ++  I+I+G+CK   + EA++  + M    
Sbjct: 444 LMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQ 503

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV---NPDVITYSTIMNAWSTAGFMD 370
           + P+++ ++ LI G  +      +   L L+ E       PD+ITY++I++A      +D
Sbjct: 504 IFPDVITYSSLIDGLCK---SGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVD 560

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +   +   GI+PD + Y+IL KG  +  + E A ++   ++  G++ +V  +T +I
Sbjct: 561 KAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMI 620

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            G+C  G  D A+ +  KM E+G  P+ KT+E ++    E  +   AE++L+ M   G+
Sbjct: 621 QGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/448 (23%), Positives = 213/448 (47%), Gaps = 10/448 (2%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           F  LIE  +  + +    LL +  I     SI     ++ +NG +PD+I     I  F  
Sbjct: 223 FKILIE--YHKTFIKQKCLLKSFEI-----SIEYTPPKILKNGYEPDTITLTTFIKGFCL 275

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN-VKPNL 213
            G + +A+    K+   G      +Y TLI G    G+ + +++LL     +G  V+P++
Sbjct: 276 KGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLR--RNDGKLVQPDV 333

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
             YN ++   C +K++ +A+++  +  +  + PDV TYN + + +   G+   A ++  +
Sbjct: 334 VMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCIVGKLKDAIDLFNK 393

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M    + P+  T  I++ G+CK+G IKEA      M +  + P++V ++ L+ G+  + +
Sbjct: 394 MTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNE 453

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            +  + +   M    V  +V +Y+ ++N +     +D+  ++F +M    I PD   YS 
Sbjct: 454 VNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSS 513

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L  G  +      A EL+  M   G  P+++ + +I+   C    +D+AI +  K+   G
Sbjct: 514 LIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQG 573

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           + P++ T+  L+ G  ++ +   A ++ + +   G +     + ++ +     GL  EA 
Sbjct: 574 IRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEAL 633

Query: 514 RILSKIKNKERTNEMEAEEDIPVESLER 541
            +LSK++      + +  E I +   E+
Sbjct: 634 ALLSKMEENGCIPDAKTYEIIILSLFEK 661



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 139/270 (51%), Gaps = 1/270 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++   + G  +EA+ +   +++   KP +VTY++L+    +    N   SI +
Sbjct: 403 VYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVTYSSLMDGYCLVNEVNKAESIFN 462

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+  +   +N +IN F +   ++EAM  F +M    + P   TY++LI G   +G
Sbjct: 463 TMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSG 522

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +   +++L+D M   G  +P++ TYN ++ A C + ++ +A  ++ K+   G++PD+ TY
Sbjct: 523 RISYALELVDEMHYRGQ-QPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTY 581

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     Q+G+ + A +V  ++   G   +     ++I G+C +G   EAL     M+E
Sbjct: 582 TILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMIQGFCDKGLFDEALALLSKMEE 641

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
            G  P+   + ++I    E  + D  +++L
Sbjct: 642 NGCIPDAKTYEIIILSLFEKDENDMAEKLL 671



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 110/209 (52%), Gaps = 3/209 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V+S   ++N   +     EA  +F  +      P ++TY++L+  L    R +    ++ 
Sbjct: 473 VQSYNIMINGFCKIKMVDEAMKLFKEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVD 532

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  PD I +N++++A  +  ++++A+    K+K  G+ P  +TY  L+KG   +G
Sbjct: 533 EMHYRGQQPDIITYNSILDALCKKHHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSG 592

Query: 192 KPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           K E++ K+  DL+ +  N+  ++  Y V+++ +C++    EA  ++ KM  +G  PD  T
Sbjct: 593 KLEDARKVFEDLLVKGYNL--DVYAYTVMIQGFCDKGLFDEALALLSKMEENGCIPDAKT 650

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           Y  I  +  +  E D AE+++ EM   G+
Sbjct: 651 YEIIILSLFEKDENDMAEKLLREMIMRGL 679


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 213/419 (50%), Gaps = 7/419 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  LM  L  +G+ +++    + ++  G +   V+Y TLL  L           ++  +
Sbjct: 82  TLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMI 141

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+    P+ + +N +I+   +   + EA D + +M   G+ P   TY TLI G+ + G+ 
Sbjct: 142 EDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQL 201

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +  LLD M  + N+ P +  YN+L+ A C E N+ EA N++  M   G+KP VVTY+T
Sbjct: 202 MGAFSLLDEMILK-NINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVTYST 260

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y   GE   A+++   M   GV PN  +  I+I+G CK  ++ EA+   R M    
Sbjct: 261 LMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKN 320

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF--RVNP-DVITYSTIMNAWSTAGFMD 370
           + P+ V +N LI G  +      +   L LM E   R  P DV+TY+++++A      +D
Sbjct: 321 MVPDTVTYNSLIDGLCK---SGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLD 377

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +F  M + GI+P  + Y+ L  G  +    + A+EL   ++  G   +V  +T +I
Sbjct: 378 KATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMI 437

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           SG C +G  D A+ +  KM ++G  PN  TFE ++    E  +  +AE++L  M A G+
Sbjct: 438 SGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 496



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 202/417 (48%), Gaps = 1/417 (0%)

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
           H P ++ +  +L +L   K++ +  S+  Q+E  G+  + +  N +IN F   G M  + 
Sbjct: 6   HTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSF 65

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
               K+ + G  P T T NTL+KG  + G+ ++S+   D +  +G  + +  +Y  L+  
Sbjct: 66  SVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQG-FQMDHVSYGTLLNG 124

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C       A  ++  +     +P+VV YNTI     ++   ++A ++  EM+  G+ P+
Sbjct: 125 LCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPD 184

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   +I G+C  G++  A      M    ++P + I+N+LI    +  +      +LA
Sbjct: 185 AITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLA 244

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
           +M +  + P V+TYST+M+ +   G +   K+IF  M + G+ P+ ++Y+I+  G  + +
Sbjct: 245 VMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCK 304

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             ++A  LL  M+     P+ V + ++I G C  G +  A+ + ++M   G   ++ T+ 
Sbjct: 305 RVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYT 364

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +L+    + +   +A  +   MK  G+ P   T+  L +     G  K A+ +   +
Sbjct: 365 SLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHL 421



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 104/208 (50%), Gaps = 1/208 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   ++N L +  +  EA  +   ++     P  VTY +L+  L    R  S  ++M+
Sbjct: 290 VYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMN 349

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G   D + + ++++A  ++ N+++A   F KMKE G+ PT  TY  LI G    G
Sbjct: 350 EMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGG 409

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + + +L   +  +G    ++ TY V++   C E    EA  +  KM  +G  P+ VT+
Sbjct: 410 RLKNAQELFQHLLVKGCC-IDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTF 468

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGV 279
             I  +  +  E D+AE+++ EM   G+
Sbjct: 469 EIIIRSLFEKDENDKAEKLLHEMIAKGL 496



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 107/228 (46%), Gaps = 2/228 (0%)

Query: 64  MNKESCRT-VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M KE  +  V + + LM+     G+ Q A+ IF+ +++ G  P++ +Y  ++  L   KR
Sbjct: 246 MTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKR 305

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +   +++ ++    M PD++ +N++I+   +SG +  A++   +M   G      TY +
Sbjct: 306 VDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTS 365

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+         +++  L   M   G ++P + TY  L+   C    +  A  +   +   
Sbjct: 366 LLDALCKNQNLDKATALFMKMKERG-IQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVK 424

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
           G   DV TY  + +   + G  D+A  +  +ME NG  PN  T  III
Sbjct: 425 GCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIII 472



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 85/173 (49%), Gaps = 5/173 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+++L +     +A A+F  + E G +P++ TYT L+  L    R  +   +  
Sbjct: 360 VVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQ 419

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G   D   +  +I+   + G  +EA+    KM+++G  P   T+  +I+      
Sbjct: 420 HLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKD 479

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           + +++ KLL  M  +G +  + +  +V V+   NE +  +A  ++H+M A G+
Sbjct: 480 ENDKAEKLLHEMIAKGLLVLDFKVADVFVQ---NEND--KAEKLLHEMIAKGL 527


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 206/397 (51%), Gaps = 1/397 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   ++N L + GK ++A+     +   G KP++VTY T++     + R      I 
Sbjct: 190 SVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIF 249

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++  G+ PDS  + + I+   + G +EEA     KMKE GL PT  TYNTLI GY   
Sbjct: 250 DLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNK 309

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E +    D M REG + P + TYN+L+ A   +  + EA  ++ +M+  G+ PD VT
Sbjct: 310 GNLEMAFDYRDKMVREG-LMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVT 368

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +   Y + G   +A  +  EM   G+QP   T   +I    K G++K+A      + 
Sbjct: 369 YNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIV 428

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P+L++FN LI G     + D    +L  M + +V PD +T++T+M      G ++
Sbjct: 429 RKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVE 488

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             +E+ ++M   GIKPD  +Y+ L  GY +  + + A  +   M+  GF+P ++ +  +I
Sbjct: 489 AARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALI 548

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            G C +   D A ++  +M   G++PN  T+ +L+ G
Sbjct: 549 QGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEG 585



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 216/431 (50%), Gaps = 1/431 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++  ++  + ++A  ++  +     K S+VT+  ++  L  + +       + 
Sbjct: 156 VHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIG 215

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +E  G+ P+ + +N +I+ +   G +E A   F  MK  G+ P + TY + I G    G
Sbjct: 216 LMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEG 275

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K EE+  +L+ M +E  ++P   TYN L+  +CN+ N+  A++   KM   G+ P V TY
Sbjct: 276 KLEEASGMLEKM-KEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTY 334

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  A   + + D+A+ +I EM   G+ P+  T  I+I+GYC+ G +K+A      M  
Sbjct: 335 NMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMIS 394

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P  V +  LI    +       D++   +    + PD+I ++ +++     G MD+
Sbjct: 395 KGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDR 454

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +  +M +  + PD   ++ L +G  RE + E A EL+  M   G  P+ + + T+IS
Sbjct: 455 AFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLIS 514

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+   G M  A  V D+M   G +P L T+  L+ G  +  +   AE++L+ M + G+ P
Sbjct: 515 GYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITP 574

Query: 492 QKSTFLLLAEA 502
             +T+L L E 
Sbjct: 575 NDNTYLSLIEG 585



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 196/408 (48%), Gaps = 36/408 (8%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           + ++ +I A  E    ++A + F  MK  G+ P     N ++  +  + + E++  L   
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           M R   +K ++ T+N+++   C E  + +A   +  M A G+KP+VVTYNTI   Y   G
Sbjct: 182 MFRM-RIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRG 240

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
             + A  +   M+  GV+P+  T G  ISG CKEGK++EA      MKE G+ P  V +N
Sbjct: 241 RVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYN 300

Query: 323 LLIKGFV------------EIMDRDGV-----------------------DEVLALMKEF 347
            LI G+             + M R+G+                       D ++  M E 
Sbjct: 301 TLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEK 360

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            + PD +TY+ ++N +   G + K   + D+M   GI+P    Y+ L     +    ++A
Sbjct: 361 GLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQA 420

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           ++L   ++  G  P++++F  +I G C++G+MDRA  +  +M +  V P+  TF TLM G
Sbjct: 421 DDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQG 480

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
                +   A E+++ MK+ G+ P   ++  L       G  K+A R+
Sbjct: 481 RCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRV 528



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 143/307 (46%)

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           Y++L+RA C  K   +A+     M   G+ P V   N + + + ++   ++A  +  EM 
Sbjct: 124 YDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMF 183

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
              ++ +  T  I+I+  CKEGK+K+A  F   M+  G+ PN+V +N +I G+      +
Sbjct: 184 RMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVE 243

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
           G   +  LMK   V PD  TY + ++     G +++   + + M + G++P A  Y+ L 
Sbjct: 244 GARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLI 303

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            GY  +   E A +    M+  G  P V  +  +I     D  MD A  +  +M E G+ 
Sbjct: 304 DGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLV 363

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P+  T+  L+ GY       +A  +   M + G+ P + T+  L       G  K+A  +
Sbjct: 364 PDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDL 423

Query: 516 LSKIKNK 522
             KI  K
Sbjct: 424 FEKIVRK 430



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 27/111 (24%), Positives = 52/111 (46%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LM      GK + A+ +   +   G KP  ++Y TL++  + +        +  ++   G
Sbjct: 477 LMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIG 536

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
            +P  + +NA+I    ++   + A     +M   G+TP  +TY +LI+G G
Sbjct: 537 FNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGIG 587


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 224/458 (48%), Gaps = 9/458 (1%)

Query: 69   CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
            C  V S   +++ + + G+ +EA  +   +   G+ P +++Y+T++         + +  
Sbjct: 686  CWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWK 745

Query: 129  IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
            ++  ++  G+ P+S  + ++I        + EA + F +M   G+ P T  Y TLI G+ 
Sbjct: 746  LIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFC 805

Query: 189  IAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G    + K   ++ SR  ++ P++ TY  ++  +C   ++ EA  + H+M   G++PD
Sbjct: 806  KRGDIRAASKFFYEMHSR--DITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPD 863

Query: 248  VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
             VT+  +   Y + G    A  V   M   G  PN  T   +I G CKEG +  A     
Sbjct: 864  SVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLH 923

Query: 308  TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWS 364
             M + G+ PN+  +N ++ G  +      ++E + L+ EF    +N D +TY+T+M+A+ 
Sbjct: 924  EMWKIGLQPNIFTYNSIVNGLCK---SGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYC 980

Query: 365  TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             +G MDK +EI  +M   G++P    +++L  G+      E  E+LL  M+  G  PN  
Sbjct: 981  KSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNAT 1040

Query: 425  IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
             F +++  +C   ++  A  ++  MC  GV P+ KT+E L+ G+ +AR    A  + Q M
Sbjct: 1041 TFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEM 1100

Query: 485  KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            K  G     ST+ +L +         EA+ +  +++ +
Sbjct: 1101 KGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 1138



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/380 (25%), Positives = 177/380 (46%), Gaps = 42/380 (11%)

Query: 76   TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
            T L++   +RG  + A   F  +      P ++TYT +++             +  ++  
Sbjct: 798  TTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFC 857

Query: 136  NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             G++PDS+ F  +IN + ++G+M++A      M ++G +P   TY TLI G    G  + 
Sbjct: 858  KGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDS 917

Query: 196  SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
            + +LL  M + G ++PN+ TYN +V   C   NI EA  ++ +  A+G+  D VTY T+ 
Sbjct: 918  ANELLHEMWKIG-LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLM 976

Query: 256  TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             AY ++GE D+A+E++ EM   G+QP   T  ++++G+C  G +++  +    M   G+ 
Sbjct: 977  DAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIA 1036

Query: 316  PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMN----------A 362
            PN   FN L+K +     R+ +    A+ K+     V PD  TY  ++           A
Sbjct: 1037 PNATTFNSLVKQYC---IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEA 1093

Query: 363  WS--------------------TAGFMDK-----CKEIFDDMGKAGIKPDAHAYSILAKG 397
            W                       GF+ +      +E+FD M + G+  D   +   +  
Sbjct: 1094 WFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDT 1153

Query: 398  YVREQEPEKAEELLMTMIES 417
              + + P+   + +  +IE+
Sbjct: 1154 KYKGKRPDTIVDPIDEIIEN 1173



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/286 (25%), Positives = 134/286 (46%)

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           V  +    G+  +V +YN +     Q G   +A  +++ ME  G  P+  +   +++GYC
Sbjct: 676 VFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYC 735

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           + G++ +  +    MK  G+ PN  I+  +I     I      +E  + M    + PD +
Sbjct: 736 RFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTV 795

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
            Y+T+++ +   G +    + F +M    I PD   Y+ +  G+ +  +  +A +L   M
Sbjct: 796 VYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 855

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
              G  P+ V FT +I+G+C  G M  A  V + M + G SPN+ T+ TL+ G  +    
Sbjct: 856 FCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 915

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
             A E+L  M   G+ P   T+  +      +G  +EA +++ + +
Sbjct: 916 DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFE 961



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 68/270 (25%), Positives = 127/270 (47%), Gaps = 1/270 (0%)

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG-KIKEALRF 305
           D   ++         G   +A  V  +M + G+  +  +C + ++   K+  K   A+  
Sbjct: 617 DPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIV 676

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
            R   E GV  N+  +N++I    ++        +L LM+     PDVI+YST++N +  
Sbjct: 677 FREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCR 736

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G +DK  ++ + M + G+KP+++ Y  +     R  +  +AEE    MI  G  P+ V+
Sbjct: 737 FGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVV 796

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +TT+I G+C  G +  A + F +M    ++P++ T+  ++ G+ +      A ++   M 
Sbjct: 797 YTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMF 856

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
             G+ P   TF  L       G  K+A R+
Sbjct: 857 CKGLEPDSVTFTELINGYCKAGHMKDAFRV 886



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 37/137 (27%), Positives = 68/137 (49%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            T+ +   LMN     G  ++ + + N ++  G  P+  T+ +L+    I+    +  +I 
Sbjct: 1003 TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIY 1062

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
              +   G+ PD   +  ++    ++ NM+EA   F +MK  G + + STY+ LIKG+   
Sbjct: 1063 KDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKR 1122

Query: 191  GKPEESVKLLDLMSREG 207
             K  E+ ++ D M REG
Sbjct: 1123 KKFLEAREVFDQMRREG 1139


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 144/525 (27%), Positives = 257/525 (48%), Gaps = 31/525 (5%)

Query: 41  EKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIE 100
           ++K L S  K  +  P   C         R   + T L++ L    +  EA  +F  + +
Sbjct: 265 QRKDLDSAFKVFNEMPLKGCR--------RNEVAYTHLIHGLCVARRIDEAMDLFVKMKD 316

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
               P++ TYT L+ +L   +R +   +++ ++EE G+ P+   +  +I++       E+
Sbjct: 317 DECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEK 376

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A +   +M E GL P   TYN LI GY   G  E++V +++LM     + PN RTYN L+
Sbjct: 377 ARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESR-KLSPNTRTYNELI 435

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           + +C + N+ +A  V++KM    + PDVVTYN++     ++G  D A  ++  M   G+ 
Sbjct: 436 KGYC-KSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLV 494

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+  T   +I   CK  +++EA     ++++ GV+PN+V++  LI G+ +    D    +
Sbjct: 495 PDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLM 554

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L  M      P+ +T++ +++     G + +   + + M K G++P     +IL    ++
Sbjct: 555 LEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLK 614

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
           + + + A      M+ SG  P+   +TT I  +C +G +  A ++  KM E+GVSP+L T
Sbjct: 615 DGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFT 674

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           + +L+ GY +  Q   A ++L+ M+  G  P + TFL L             K +L    
Sbjct: 675 YSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSL------------IKHLLEMKY 722

Query: 521 NKERTNEME-------AEEDIPVESLERLYHKEAT--TASYPNLL 556
            K++ +E E        E D  VE LE++     T    SY  L+
Sbjct: 723 GKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLI 767



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 226/452 (50%), Gaps = 2/452 (0%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C  + +  K++N   + G  +EA    + ++E G  P   TYT+L+     +K  +S   
Sbjct: 215 CPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK 274

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           + +++   G   + + +  +I+    +  ++EAMD F KMK+    PT  TY  LIK   
Sbjct: 275 VFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLC 334

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            + +  E++ L+  M   G +KPN+ TY VL+ + C++    +A  ++ +M   G+ P+V
Sbjct: 335 GSERKSEALNLVKEMEETG-IKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNV 393

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           +TYN +   Y + G  + A +V+  ME   + PN RT   +I GYCK   + +A+     
Sbjct: 394 ITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNK 452

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M E  V P++V +N LI G     + D    +L+LM +  + PD  TY++++++   +  
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKR 512

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +++  ++FD + + G+ P+   Y+ L  GY +  + ++A  +L  M+     PN + F  
Sbjct: 513 VEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNA 572

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G C+DG +  A  + +KM + G+ P + T   L+    +      A    Q M + G
Sbjct: 573 LIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSG 632

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
             P   T+    +     G   +A+ +++K++
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLLDAEDMMAKMR 664



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 150/545 (27%), Positives = 247/545 (45%), Gaps = 65/545 (11%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TVR+ T L+ SL    +  EA  +   + E G KP++ TYT L+ +L  Q +F     ++
Sbjct: 322 TVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELL 381

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            Q+ E G+ P+ I +NA+IN + + G +E+A+D    M+   L+P T TYN LIKGY   
Sbjct: 382 GQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY-CK 440

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
               +++ +L+ M  E  V P++ TYN L+   C   N   A+ ++  M   G+ PD  T
Sbjct: 441 SNVHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT 499

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y ++  +  ++   ++A ++   +E  GV PN      +I GYCK GK+ EA      M 
Sbjct: 500 YTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKML 559

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV----NPDVITYSTIMNAWSTA 366
                PN + FN LI G       DG  +   L++E  V     P V T + +++     
Sbjct: 560 SKNCLPNSLTFNALIHGLCA----DGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD 615

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G  D     F  M  +G KPDAH Y+   + Y RE     AE+++  M E+G  P++  +
Sbjct: 616 GDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTY 675

Query: 427 TTIISGW--------------------------------------------------CSD 436
           +++I G+                                                  C+ 
Sbjct: 676 SSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAM 735

Query: 437 GSM---DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM-KAFGVHPQ 492
            +M   D  +E+ +KM EH V+PN K++E L+ G  E      AE++   M +  G+ P 
Sbjct: 736 SNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPS 795

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASY 552
           +  F  L           EA +++  +       ++E+ + + +  L +   KE  T+ +
Sbjct: 796 ELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCK-VLICGLYKKGEKERGTSVF 854

Query: 553 PNLLQ 557
            NLLQ
Sbjct: 855 QNLLQ 859



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 212/422 (50%), Gaps = 2/422 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+NSL   G   E + ++  ++E    P++ TY  ++            +  +S++ E G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +DPD   + ++I  + +  +++ A   F +M   G       Y  LI G  +A + +E++
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M ++    P +RTY VL+++ C  +  +EA N++ +M  +G+KP++ TY  +  +
Sbjct: 309 DLFVKM-KDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDS 367

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                + ++A E++ +M   G+ PN  T   +I+GYCK G I++A+     M+   + PN
Sbjct: 368 LCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKLSPN 427

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +N LIKG+ +      +  VL  M E +V PDV+TY+++++    +G  D    +  
Sbjct: 428 TRTYNELIKGYCKSNVHKAMG-VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G+ PD   Y+ +     + +  E+A +L  ++ + G +PNVV++T +I G+C  G
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D A  + +KM      PN  TF  L+ G     +   A  + + M   G+ P  ST  
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606

Query: 498 LL 499
           +L
Sbjct: 607 IL 608



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 112/490 (22%), Positives = 203/490 (41%), Gaps = 93/490 (18%)

Query: 70  RTVRSMTKLMNSLIE---RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           R +   T+  N LI+   +    +A  + N ++E    P +VTY +L+        F+S 
Sbjct: 422 RKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
           + ++S + + G+ PD   + ++I++  +S  +EEA D F  +++ G+ P    Y  LI G
Sbjct: 482 YRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDG 541

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA-------------- 232
           Y  AGK +E+  +L+ M  + N  PN  T+N L+   C +  + EA              
Sbjct: 542 YCKAGKVDEAHLMLEKMLSK-NCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQP 600

Query: 233 ---------------------WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
                                ++   +M +SG KPD  TY T    Y + G    AE+++
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMM 660

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            +M  NGV P+  T   +I GY   G+   A    + M++ G  P+   F  LIK  +E+
Sbjct: 661 AKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEM 720

Query: 332 ------------------MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM---- 369
                             M+ D V E+L  M E  V P+  +Y  ++      G +    
Sbjct: 721 KYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAE 780

Query: 370 --------------------------------DKCKEIFDDMGKAGIKPDAHAYSILAKG 397
                                           ++  ++ DDM   G  P   +  +L  G
Sbjct: 781 KVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICG 840

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             ++ E E+   +   +++ G++ + + +  II G    G ++   E+F+ M ++G   +
Sbjct: 841 LYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFS 900

Query: 458 LKTFETLMWG 467
            +T+  L+ G
Sbjct: 901 SQTYSLLIEG 910



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 168/378 (44%), Gaps = 37/378 (9%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           YNTL+      G  +E +K + +   E  V PN+ TYN +V  +C   N+ EA   + K+
Sbjct: 186 YNTLLNSLARFGLVDE-MKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ------------------- 280
             +G+ PD  TY ++   Y Q  + D A +V  EM   G +                   
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304

Query: 281 ----------------PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
                           P  RT  ++I   C   +  EAL   + M+E G+ PN+  + +L
Sbjct: 305 DEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVL 364

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I         +   E+L  M E  + P+VITY+ ++N +   G ++   ++ + M    +
Sbjct: 365 IDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELMESRKL 424

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+   Y+ L KGY +     KA  +L  M+E    P+VV + ++I G C  G+ D A  
Sbjct: 425 SPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYR 483

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           +   M + G+ P+  T+ +++    ++++   A ++   ++  GV+P    +  L +   
Sbjct: 484 LLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYC 543

Query: 505 ATGLTKEAKRILSKIKNK 522
             G   EA  +L K+ +K
Sbjct: 544 KAGKVDEAHLMLEKMLSK 561



 Score = 52.8 bits (125), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 29/134 (21%), Positives = 61/134 (45%)

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+ L     R    ++ +++ M M+E    PN+  +  +++G+C  G+++ A +   K+
Sbjct: 185 CYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKI 244

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
            E G+ P+  T+ +L+ GY + +    A ++   M   G    +  +  L          
Sbjct: 245 VEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRI 304

Query: 510 KEAKRILSKIKNKE 523
            EA  +  K+K+ E
Sbjct: 305 DEAMDLFVKMKDDE 318


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 227/441 (51%), Gaps = 3/441 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L    K  EA A+ + ++  G +P L TY T++  L  +   +   S++ ++E+  
Sbjct: 191 LIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGK 250

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++ D + +  +I+A     N+ +A++ F +M   G+ P   TYN+LI+     G+  ++ 
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310

Query: 198 KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +LL D++ R+ N  PN+ T++ L+ A+  E  + EA  +  +M    + PD+ TY+++  
Sbjct: 311 RLLSDMIERKIN--PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLIN 368

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            +  +   D+A+ +   M      PN  T   +I G+CK  +++E +   R M + G+  
Sbjct: 369 GFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVG 428

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N V +N LI+G  +  D D   ++   M    V PD+ITYS +++     G ++K   +F
Sbjct: 429 NTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVF 488

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           + + K+ ++PD + Y+I+ +G  +  + E   +L  ++   G  PNV+I+TT+ISG+C  
Sbjct: 489 EYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRK 548

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G  + A  +F +M E G  PN  T+ TL+           + E+++ M++ G     ST 
Sbjct: 549 GLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTI 608

Query: 497 LLLAEARRATGLTKEAKRILS 517
            ++        L K    +LS
Sbjct: 609 SMVINMLHDGRLEKSYLEMLS 629



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 216/437 (49%), Gaps = 6/437 (1%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL  +++   K  +A  +F  +++    PS+V +  LL+A+    +F+ + S+  +++  
Sbjct: 50  KLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNL 109

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            +  D   +N +IN F     +  A+    KM + G  P   T ++L+ GY    +  E+
Sbjct: 110 RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 169

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           V L+D M      +PN  T+N L+         +EA  ++ +M A G +PD+ TY T+  
Sbjct: 170 VALVDQMFVM-EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 228

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              + G+ D A  ++ +ME   ++ +      II   C    + +AL     M   G+ P
Sbjct: 229 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 288

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N+V +N LI+             +L+ M E ++NP+V+T+S +++A+   G + + ++++
Sbjct: 289 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 348

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           D+M K  I PD   YS L  G+      ++A+ +   MI     PNVV + T+I G+C  
Sbjct: 349 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 408

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             ++  +E+F +M + G+  N  T+ TL+ G  +A     A++I + M + GV P   T+
Sbjct: 409 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468

Query: 497 LLLAEARRATGLTKEAK 513
            +L +     GL K  K
Sbjct: 469 SILLD-----GLCKYGK 480



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 160/323 (49%), Gaps = 1/323 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+  L   G+  +A  + +++IE    P++VT++ L+ A   + +      +  
Sbjct: 290 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +  +DPD   ++++IN F     ++EA   F  M      P   TYNTLIKG+  A 
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE ++L   MS+ G V  N  TYN L++      +   A  +  KM + G+ PD++TY
Sbjct: 410 RVEEGMELFREMSQRGLV-GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +     + G+ ++A  V   ++ + ++P+  T  I+I G CK GK+++      ++  
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV PN++I+  +I GF     ++  D +   MKE    P+  TY+T++ A    G    
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAA 588

Query: 372 CKEIFDDMGKAGIKPDAHAYSIL 394
             E+  +M   G   DA   S++
Sbjct: 589 SAELIKEMRSCGFVGDASTISMV 611



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 148/290 (51%), Gaps = 1/290 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+++ ++ GK  EA+ +++ +I+    P + TY++L+    +  R +    +  
Sbjct: 325 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 384

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +      P+ + +N +I  F ++  +EE M+ F +M + GL   T TYNTLI+G   AG
Sbjct: 385 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 444

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + + K+   M  +G V P++ TY++L+   C    + +A  V   +  S M+PD+ TY
Sbjct: 445 DCDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 503

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     + G+ +   ++   +   GV+PN      +ISG+C++G  +EA    R MKE
Sbjct: 504 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
            G  PN   +N LI+  +   D+    E++  M+      D  T S ++N
Sbjct: 564 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 113/228 (49%), Gaps = 1/228 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ++K+    V +   L+    +  + +E   +F  + + G   + VTY TL+  L      
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    I  ++  +G+ PD I ++ +++   + G +E+A+  F  +++S + P   TYN +
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I+G   AGK E+   L   +S +G VKPN+  Y  ++  +C +    EA  +  +M   G
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKG-VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
             P+  TYNT+  A  ++G+   + E+I EM   G   +  T  ++I+
Sbjct: 566 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 210/385 (54%), Gaps = 5/385 (1%)

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
           I+K F+    ++ ++ E G  P+ + +  +I+   + G +E+A D F++M + GL     
Sbjct: 179 IEKSFD----LLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEW 234

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           TY  LI G    G  ++  ++ + M   G V PNL TYN ++   C +    +A+ V  +
Sbjct: 235 TYTVLIHGLFKNGIKKQGFEMYEKMQEHG-VFPNLYTYNCVMNQLCKDGRTKDAFKVFDE 293

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M   G+  ++VTYNT+     +  +A++A +V+ +M+   + PN  T   +I G+C  GK
Sbjct: 294 MRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSVGK 353

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           + +AL   R +K  G+ P+LV +N+L+ GF    D  G  +++  M+E  + P  +TY+ 
Sbjct: 354 LGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTI 413

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++ ++ +  M+   ++   M + G+ PD H YS+L  G+  + +  +A  L  +M+E  
Sbjct: 414 LIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKM 473

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PN VI+ T+I G+C +GS  RA+ +F  M E  ++PN+ ++  L+    + R+   AE
Sbjct: 474 LEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKEAE 533

Query: 479 EILQIMKAFGVHPQKSTFLLLAEAR 503
           ++++ M   G+ P  +   L++ A+
Sbjct: 534 DLVEKMIDSGIDPSDTICNLISRAK 558



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 209/445 (46%), Gaps = 8/445 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N+ ++      +   FN +++ G  P    +  LL  +     FN      ++  +  
Sbjct: 100 IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNE-SKIK 158

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   F  VI    E+G +E++ D   +++E G +P    Y TLI G    G+ E++ 
Sbjct: 159 VVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAK 218

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M + G V  N  TY VL+          + + +  KM   G+ P++ TYN +   
Sbjct: 219 DLFFEMGKFGLV-ANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQ 277

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             ++G    A +V  EM   GV  N  T   +I G C+E K  EA +    MK Y ++PN
Sbjct: 278 LCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPN 337

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
           L+ +N LI GF  +     + + L+L ++ +   ++P ++TY+ +++ +   G      +
Sbjct: 338 LITYNTLIDGFCSV---GKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAK 394

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +  +M + GIKP    Y+IL   + R    E A +L  +M E G  P+V  ++ +I G+C
Sbjct: 395 MVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFC 454

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G M+ A  +F  M E  + PN   + T++ GY +    +RA  + + M+   + P  +
Sbjct: 455 IKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVA 514

Query: 495 TFLLLAEARRATGLTKEAKRILSKI 519
           ++  L          KEA+ ++ K+
Sbjct: 515 SYSYLIRVLCKERKLKEAEDLVEKM 539



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 212/467 (45%), Gaps = 50/467 (10%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           AQ++   +I G  +    T ++LL  LT               E       S  +  +IN
Sbjct: 58  AQSLLLQVISGKIQSQFFTSSSLLHYLT---------------ESETSKTKSRLYEVIIN 102

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL--------------------------- 183
           A+ +S +++ ++  F +M + G  P ++ +N L                           
Sbjct: 103 AYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESKIKVVLD 162

Query: 184 -------IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
                  IKG   AG+ E+S  LL +  RE    PN+  Y  L+   C +  I +A ++ 
Sbjct: 163 VYSFGIVIKGCCEAGEIEKSFDLL-VELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLF 221

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
            +M   G+  +  TY  +     +NG   Q  E+  +M+ +GV PN  T   +++  CK+
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKD 281

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
           G+ K+A +    M+E GV  N+V +N LI G    M  +  ++V+  MK + +NP++ITY
Sbjct: 282 GRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITY 341

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           +T+++ + + G + K   +  D+   G+ P    Y++L  G+ R+ +   A +++  M E
Sbjct: 342 NTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEE 401

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G  P+ V +T +I  +    +M+ AI++   M E G+ P++ T+  L+ G+    Q   
Sbjct: 402 RGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNE 461

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           A  + + M    + P +  +  +       G +  A R+   ++ KE
Sbjct: 462 ASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKE 508



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/184 (20%), Positives = 75/184 (40%), Gaps = 36/184 (19%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+++       + A  + +++ E G  P + TY+ L+    I+ + N    +   +
Sbjct: 410 TYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSM 469

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E  ++P+ + +N +I  + + G+   A+  F  M+E  L P  ++Y+ LI         
Sbjct: 470 VEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLI--------- 520

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
                                      R  C E+ + EA +++ KM  SG+ P     N 
Sbjct: 521 ---------------------------RVLCKERKLKEAEDLVEKMIDSGIDPSDTICNL 553

Query: 254 IATA 257
           I+ A
Sbjct: 554 ISRA 557


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 125/421 (29%), Positives = 218/421 (51%), Gaps = 7/421 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ + T L+N L + GK  +A  +F++++  G +P   TYTT++  L           + 
Sbjct: 44  TIVTFTTLINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLF 103

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++EE G   + + ++ +I++  +   + EA+D F  MK   ++PT  TY +LI+G    
Sbjct: 104 KKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNF 163

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + +E+  LL+ M+   N+ PN+ T+NVLV  +C E  +  A  V+  M   G++PDVVT
Sbjct: 164 SRWKEASALLNEMTSL-NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVT 222

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++   Y+   E  +A ++   M   G +P+  +  I+I+GYCK  +I EA +    M 
Sbjct: 223 YNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMI 282

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAG 367
             G  PN V +N LI G  ++     + E   L K    N   P++ TY+ +++ +   G
Sbjct: 283 HQGSTPNNVSYNTLIHGLCQL---GRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQG 339

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
           ++ K   +F  M    +KP+   Y+IL     +    + A EL   +   G  PNV I+T
Sbjct: 340 YLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYT 399

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           TII+G C +G +D A+E F  M + G  P+  ++  ++ G+ + +   RA  ++  M+  
Sbjct: 400 TIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDR 459

Query: 488 G 488
           G
Sbjct: 460 G 460



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 193/387 (49%), Gaps = 1/387 (0%)

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +E  G+ P++   N +IN F +   ++       K  + GL PT  T+ TLI G G  GK
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             ++V+L D M   G  +P+  TY  ++   C       A  +  KM  +G + +VVTY+
Sbjct: 61  FAQAVELFDDMVARG-CQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYS 119

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+  +  +    ++A ++   M+   + P   T   +I G C   + KEA      M   
Sbjct: 120 TLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSL 179

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
            + PN+V FN+L+  F +       + VL  M E  V PDV+TY+++M  +S    + + 
Sbjct: 180 NIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEA 239

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           +++FD M   G KPD  +YSIL  GY + +  ++A++L   MI  G  PN V + T+I G
Sbjct: 240 RKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHG 299

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G +  A ++F  M  +G  PNL T+  L+ G+ +     +A  + + M++  + P 
Sbjct: 300 LCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPN 359

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKI 519
              + +L  A   +G  K+A+ + S++
Sbjct: 360 LVMYNILVNAMCKSGNLKDARELFSEL 386



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 192/357 (53%), Gaps = 2/357 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C+  V + + L++SL +  +  EA  IF+ +      P++ TYT+L+  L    R
Sbjct: 106 MEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSR 165

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +    ++++++    + P+ + FN +++ F + G +  A      M E G+ P   TYN+
Sbjct: 166 WKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNS 225

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ GY +  +  E+ KL D+M  +G  KP++ +Y++L+  +C  K I EA  + ++M   
Sbjct: 226 LMYGYSMWTEVVEARKLFDVMITKG-CKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQ 284

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P+ V+YNT+     Q G   +A+++   M  NG  PN  T  I++ G+CK+G + +A
Sbjct: 285 GSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKA 344

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
            R  R M+   + PNLV++N+L+    +  +     E+ + +    + P+V  Y+TI+N 
Sbjct: 345 FRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIING 404

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
               G +D+  E F +M   G  PD  +Y+++ +G+++ ++  +A  L+  M + GF
Sbjct: 405 LCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGF 461



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 192/423 (45%), Gaps = 4/423 (0%)

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
            G  P+  T   L+      +R +   S++++  + G+ P  + F  +IN   + G   +
Sbjct: 4   AGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQ 63

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A++ F  M   G  P   TY T+I G    G+   +  L   M   G  + N+ TY+ L+
Sbjct: 64  AVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAG-CQLNVVTYSTLI 122

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
            + C  + + EA ++   M A  + P + TY ++           +A  ++ EM    + 
Sbjct: 123 HSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIM 182

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           PN  T  +++  +CKEGK+  A    +TM E GV P++V +N L+ G+    +     ++
Sbjct: 183 PNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKL 242

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
             +M      PDV +YS ++N +  A  +D+ K++F++M   G  P+  +Y+ L  G  +
Sbjct: 243 FDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQ 302

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
                +A++L   M  +G  PN+  +  ++ G+C  G + +A  +F  M    + PNL  
Sbjct: 303 LGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVM 362

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  L+    ++     A E+   +   G+ P    +  +       GL  EA   L   +
Sbjct: 363 YNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEA---LEAFR 419

Query: 521 NKE 523
           N E
Sbjct: 420 NME 422



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 168/406 (41%), Gaps = 45/406 (11%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           + PN  T N+L+  +C  + +   ++V+ K    G++P +VT+ T+     + G+  QA 
Sbjct: 6   LSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAV 65

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           E+  +M   G QP+  T   II+G CK G+   A    + M+E G   N           
Sbjct: 66  ELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLN----------- 114

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
                                   V+TYST++++      +++  +IF  M    I P  
Sbjct: 115 ------------------------VVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTI 150

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y+ L +G       ++A  LL  M      PNVV F  ++  +C +G +  A  V   
Sbjct: 151 FTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKT 210

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M E GV P++ T+ +LM+GYS   +   A ++  +M   G  P   ++ +L         
Sbjct: 211 MTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKR 270

Query: 509 TKEAKRILSKIKNKERT-NEMEAEEDIP-------VESLERLYHKEATTASYPNLLQIPN 560
             EAK++ +++ ++  T N +     I        +   + L+    T  + PNL     
Sbjct: 271 IDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAI 330

Query: 561 VVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYLSHSCKSG 606
           ++  D       L K   L R   S+         ++ ++  CKSG
Sbjct: 331 LL--DGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSG 374



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 23/102 (22%), Positives = 50/102 (49%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N++ + G  ++A+ +F+ L   G +P++  YTT++  L  +   +        +E++G
Sbjct: 366 LVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDG 425

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
             PD   +N +I  F +  +   A+    +M++ G      T
Sbjct: 426 CPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 210/425 (49%), Gaps = 1/425 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+N+    G  +E + +   + E G  PSLVTY  ++  L      +    +  
Sbjct: 236 VYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAFELKK 295

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +++ G+  D   ++ +I+ F +     EA     +M   GL P    Y  LI G+   G
Sbjct: 296 LMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDGFMRQG 355

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E+ ++ + M   G VK NL TYN LV+  C   ++ +A  ++++M   G+KPD  TY
Sbjct: 356 DSGEAFRVKEEMLARG-VKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPDTQTY 414

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y +     + ++++ EM+ + + P   TCG+II+G C+ G I++A R    M  
Sbjct: 415 NNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFEIMVS 474

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV PN VI+  LIKG V+         +L +M +  V PDV+ Y++++     +  M++
Sbjct: 475 LGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSRKMEE 534

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            K+   +M + G+KP+ + Y  L  GY +  E + A+     M+  G  PN V+ T +I 
Sbjct: 535 AKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCTALID 594

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C +GS   A  +F  M    V P+++T+  L+ G     +   A E+L      G+ P
Sbjct: 595 GYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVP 654

Query: 492 QKSTF 496
              T+
Sbjct: 655 DVFTY 659



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 235/480 (48%), Gaps = 37/480 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  + + G  ++A A+ N +I  G KP   TY  ++     ++  + +  ++S+++++ 
Sbjct: 382 LVKGVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSN 441

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P +     +IN     G++E+A   F  M   G+ P    Y TLIKG+   G+ +E+V
Sbjct: 442 LVPTAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAV 501

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L +M ++G V+P++  YN ++   C  + + EA + + +M   G+KP+V TY  +   
Sbjct: 502 RILKVMDKKG-VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHG 560

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y ++GE   A+    EM   G+ PN   C  +I GYCKEG   EA    R M    VHP+
Sbjct: 561 YCKSGEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPD 620

Query: 318 LVIFNLLIKGFV-------------EIMDRDGVDEVL-------------ALMKEFR--- 348
           +  ++ LI G +             E +++  V +V               + K F+   
Sbjct: 621 VRTYSALIHGLLRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHE 680

Query: 349 ------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
                 ++P++ITY+ ++N    AG +++ +E+FD +   G+  +A  Y+ +  GY +  
Sbjct: 681 YMCQKGISPNIITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSG 740

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
              KA  L   M   G  P+  +++ +I G   +G+ ++A+ +F +  + G +    +  
Sbjct: 741 NLSKAFRLFDEMTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFAST-SSLN 799

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            LM G+ ++ +   A ++L+ M    V P   T+ +L +    TG  KEA++    ++ +
Sbjct: 800 ALMDGFCKSGKVIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKR 859



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 218/437 (49%), Gaps = 1/437 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++  + +G   EA  +   ++  G K +L TY  L+  +          ++++++  
Sbjct: 345 TALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIM 404

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ PD+  +N +I  + +  N     D   +MK+S L PT  T   +I G    G  E+
Sbjct: 405 VGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIED 464

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + ++ ++M   G VKPN   Y  L++    E    EA  ++  M   G++PDV+ YN++ 
Sbjct: 465 ASRVFEIMVSLG-VKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVI 523

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               ++ + ++A++ +VEM   G++PN  T G +I GYCK G+++ A R+ + M   G+ 
Sbjct: 524 IGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIA 583

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN V+   LI G+ +         +   M    V+PDV TYS +++     G +    E+
Sbjct: 584 PNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMEL 643

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
             +  + G+ PD   Y+ +  G+ ++    KA +L   M + G  PN++ +  +I+G C 
Sbjct: 644 LSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCK 703

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G ++RA E+FD +   G++ N  T+ T++ GY ++    +A  +   M   GV P    
Sbjct: 704 AGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFV 763

Query: 496 FLLLAEARRATGLTKEA 512
           +  L +  R  G T++A
Sbjct: 764 YSALIDGCRKEGNTEKA 780



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/507 (26%), Positives = 227/507 (44%), Gaps = 49/507 (9%)

Query: 35  KKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAI 94
           K+ N    K L S  K ++  P              T  +   ++N L   G  ++A  +
Sbjct: 423 KEQNTSRVKDLLSEMKKSNLVP--------------TAYTCGMIINGLCRHGSIEDASRV 468

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           F  ++  G KP+ V YTTL+     + RF     I+  +++ G+ PD + +N+VI    +
Sbjct: 469 FEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCK 528

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
           S  MEEA D   +M E GL P   TY  LI GY  +G+ + + +    M   G + PN  
Sbjct: 529 SRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCG-IAPNDV 587

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
               L+  +C E + TEA ++   M    + PDV TY+ +     +NG+   A E++ E 
Sbjct: 588 VCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEF 647

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G+ P+  T   IISG+CK+G I +A +    M + G+ PN++ +N LI G  +  + 
Sbjct: 648 LEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEI 707

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           +   E+   +    +  + +TY+TI++ +  +G + K   +FD+M   G+ PD+  YS L
Sbjct: 708 ERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSAL 767

Query: 395 AKGYVREQEPEKA----------------------------------EELLMTMIESGFH 420
             G  +E   EKA                                   +LL  M++    
Sbjct: 768 IDGCRKEGNTEKALSLFLESVQKGFASTSSLNALMDGFCKSGKVIEANQLLEDMVDKHVK 827

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+ V +T +I   C  G +  A + F  M +  + PN  T+  L+ GY+ A +      +
Sbjct: 828 PDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFAL 887

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATG 507
              M A  + P   T+ ++ +A    G
Sbjct: 888 FDEMIAKDIEPDGVTWSVMIDAHLKEG 914



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 217/439 (49%), Gaps = 1/439 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   ++G   EA + F      G    L+    LL+ L    +        + + E  
Sbjct: 172 LIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNGMLEAN 231

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   +  +INA   +GN +E     ++M+E G +P+  TYN +I G   AG+ +E+ 
Sbjct: 232 VLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGEVDEAF 291

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L  LM ++G V  ++ TY++L+  +  +K  TEA  ++ +M + G+KP  V Y  +   
Sbjct: 292 ELKKLMDKKGLV-ADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTALIDG 350

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G++ +A  V  EM   GV+ N  T   ++ G CK G +++A      M   G+ P+
Sbjct: 351 FMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVGIKPD 410

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +N +I+G+++  +   V ++L+ MK+  + P   T   I+N     G ++    +F+
Sbjct: 411 TQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDASRVFE 470

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G+KP+A  Y+ L KG+V+E   ++A  +L  M + G  P+V+ + ++I G C   
Sbjct: 471 IMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGLCKSR 530

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M+ A +   +M E G+ PN+ T+  L+ GY ++ +   A+   + M   G+ P      
Sbjct: 531 KMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPNDVVCT 590

Query: 498 LLAEARRATGLTKEAKRIL 516
            L +     G T EA  I 
Sbjct: 591 ALIDGYCKEGSTTEATSIF 609



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 209/424 (49%), Gaps = 12/424 (2%)

Query: 76   TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
            T L++   + G   EA +IF  ++     P + TY+ L+  L    +      ++S+  E
Sbjct: 590  TALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLE 649

Query: 136  NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             G+ PD   +N++I+ F + G + +A      M + G++P   TYN LI G   AG+ E 
Sbjct: 650  KGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIER 709

Query: 196  SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
            + +L D +  +G +  N  TY  ++  +C   N+++A+ +  +M   G+ PD   Y+ + 
Sbjct: 710  ARELFDGIPGKG-LAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALI 768

Query: 256  TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
                + G  ++A  + +E    G      +   ++ G+CK GK+ EA +    M +  V 
Sbjct: 769  DGCRKEGNTEKALSLFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKHVK 827

Query: 316  PNLVIFNLLIK-----GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            P+ V + +LI      GF++  ++  VD     M++  + P+ +TY+ +++ ++ AG   
Sbjct: 828  PDHVTYTILIDYHCKTGFLKEAEQFFVD-----MQKRNLMPNALTYTALLSGYNMAGRRS 882

Query: 371  KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
            +   +FD+M    I+PD   +S++   +++E +  K  +L+  M++ G + +  +   +I
Sbjct: 883  EMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLI 942

Query: 431  SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
               C    +   ++V +K+ E G++ +L T  TL+  + +A +   A  +L+ M  F   
Sbjct: 943  DPLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWV 1002

Query: 491  PQKS 494
            P  +
Sbjct: 1003 PDST 1006



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 200/454 (44%), Gaps = 14/454 (3%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           V +  L+     +  F+   S     + NG     +  N +++   ++  +E     FW+
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLE----LFWR 222

Query: 168 ----MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
               M E+ +     TY  LI  +  AG  +E  +LL  M  +G   P+L TYNV++   
Sbjct: 223 FYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKG-CSPSLVTYNVVIGGL 281

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C    + EA+ +   M   G+  DV TY+ +   + +     +A+ ++ EM   G++P  
Sbjct: 282 CRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGH 341

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
                +I G+ ++G   EA R    M   GV  NL  +N L+KG  +  D +  D +L  
Sbjct: 342 VAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNE 401

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M    + PD  TY+ ++  +       + K++  +M K+ + P A+   ++  G  R   
Sbjct: 402 MIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGS 461

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            E A  +   M+  G  PN VI+TT+I G   +G    A+ +   M + GV P++  + +
Sbjct: 462 IEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNS 521

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           ++ G  ++R+   A++ L  M   G+ P   T+  L      +G  + A R       KE
Sbjct: 522 VIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYF-----KE 576

Query: 524 RTNEMEAEEDIPVESLERLYHKEATTASYPNLLQ 557
                 A  D+   +L   Y KE +T    ++ +
Sbjct: 577 MLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFR 610



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 161/340 (47%), Gaps = 8/340 (2%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L+N L + G+ + A+ +F+ +   G   + VTY T++         +    +  ++   G
Sbjct: 697  LINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKG 756

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            + PDS  ++A+I+   + GN E+A+  F +  + G   +TS+ N L+ G+  +GK  E+ 
Sbjct: 757  VPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFA-STSSLNALMDGFCKSGKVIEAN 815

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +LL+ M  + +VKP+  TY +L+   C    + EA      M    + P+ +TY  + + 
Sbjct: 816  QLLEDMV-DKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSG 874

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            Y   G   +   +  EM    ++P+G T  ++I  + KEG   + L+    M + G + +
Sbjct: 875  YNMAGRRSEMFALFDEMIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVS 934

Query: 318  LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
              + ++LI     +  ++ V EVL ++++     +N  + T ST++  +  AG MD    
Sbjct: 935  KNVCHVLID---PLCRKEHVSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAAR 991

Query: 375  IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
            +   M +    PD+   + L        + E A + L  M
Sbjct: 992  VLKSMVRFKWVPDSTELNDLINVEQDSTDSENAGDFLKQM 1031


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 228/445 (51%), Gaps = 3/445 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L++ L    K  EA A+ + ++  G +P L TY T++  L  +   +   S++ ++
Sbjct: 171 TFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKM 230

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+  ++ D + +  +I+A     N+ +A++ F +M   G+ P   TYN+LI+     G+ 
Sbjct: 231 EKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 290

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            ++ +LL D++ R+ N  PN+ T++ L+ A+  E  + EA  +  +M    + PD+ TY+
Sbjct: 291 SDASRLLSDMIERKIN--PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 348

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++   +  +   D+A+ +   M      PN  T   +I G+CK  +++E +   R M + 
Sbjct: 349 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQR 408

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+  N V +N LI+G  +  D D   ++   M    V PD+ITYS +++     G ++K 
Sbjct: 409 GLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKA 468

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             +F+ + K+ ++PD + Y+I+ +G  +  + E   +L  ++   G  PNV+I+TT+ISG
Sbjct: 469 LVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISG 528

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C  G  + A  +F +M E G  PN  T+ TL+           + E+++ M++ G    
Sbjct: 529 FCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 588

Query: 493 KSTFLLLAEARRATGLTKEAKRILS 517
            ST  ++        L K    +LS
Sbjct: 589 ASTISMVINMLHDGRLEKSYLEMLS 613



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 216/437 (49%), Gaps = 6/437 (1%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL  +++   K  +A  +F  +++    PS+V +  LL+A+    +F+ + S+  +++  
Sbjct: 34  KLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNL 93

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            +  D   +N +IN F     +  A+    KM + G  P   T ++L+ GY    +  E+
Sbjct: 94  RISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 153

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           V L+D M      +PN  T+N L+         +EA  ++ +M A G +PD+ TY T+  
Sbjct: 154 VALVDQMFVM-EYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVN 212

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              + G+ D A  ++ +ME   ++ +      II   C    + +AL     M   G+ P
Sbjct: 213 GLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRP 272

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N+V +N LI+             +L+ M E ++NP+V+T+S +++A+   G + + ++++
Sbjct: 273 NVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLY 332

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           D+M K  I PD   YS L  G+      ++A+ +   MI     PNVV + T+I G+C  
Sbjct: 333 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 392

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             ++  +E+F +M + G+  N  T+ TL+ G  +A     A++I + M + GV P   T+
Sbjct: 393 KRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 452

Query: 497 LLLAEARRATGLTKEAK 513
            +L +     GL K  K
Sbjct: 453 SILLD-----GLCKYGK 464



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/323 (27%), Positives = 160/323 (49%), Gaps = 1/323 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+  L   G+  +A  + +++IE    P++VT++ L+ A   + +      +  
Sbjct: 274 VVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 333

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +  +DPD   ++++IN F     ++EA   F  M      P   TYNTLIKG+  A 
Sbjct: 334 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 393

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE ++L   MS+ G V  N  TYN L++      +   A  +  KM + G+ PD++TY
Sbjct: 394 RVEEGMELFREMSQRGLV-GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 452

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +     + G+ ++A  V   ++ + ++P+  T  I+I G CK GK+++      ++  
Sbjct: 453 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 512

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV PN++I+  +I GF     ++  D +   MKE    P+  TY+T++ A    G    
Sbjct: 513 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAA 572

Query: 372 CKEIFDDMGKAGIKPDAHAYSIL 394
             E+  +M   G   DA   S++
Sbjct: 573 SAELIKEMRSCGFVGDASTISMV 595



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 148/290 (51%), Gaps = 1/290 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+++ ++ GK  EA+ +++ +I+    P + TY++L+    +  R +    +  
Sbjct: 309 VVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFE 368

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +      P+ + +N +I  F ++  +EE M+ F +M + GL   T TYNTLI+G   AG
Sbjct: 369 LMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAG 428

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + + K+   M  +G V P++ TY++L+   C    + +A  V   +  S M+PD+ TY
Sbjct: 429 DCDMAQKIFKKMVSDG-VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTY 487

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     + G+ +   ++   +   GV+PN      +ISG+C++G  +EA    R MKE
Sbjct: 488 NIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKE 547

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
            G  PN   +N LI+  +   D+    E++  M+      D  T S ++N
Sbjct: 548 DGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 597



 Score = 95.9 bits (237), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 113/228 (49%), Gaps = 1/228 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ++K+    V +   L+    +  + +E   +F  + + G   + VTY TL+  L      
Sbjct: 371 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 430

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    I  ++  +G+ PD I ++ +++   + G +E+A+  F  +++S + P   TYN +
Sbjct: 431 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 490

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I+G   AGK E+   L   +S +G VKPN+  Y  ++  +C +    EA  +  +M   G
Sbjct: 491 IEGMCKAGKVEDGWDLFCSLSLKG-VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 549

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
             P+  TYNT+  A  ++G+   + E+I EM   G   +  T  ++I+
Sbjct: 550 TLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 597


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 226/445 (50%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N++ E+G   EA  +   L   G +  +V+Y  +L  L + KR+  +  +M ++    
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + FN +I     +G  E   +   +M E G TP    Y T+I G    G  E + 
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L+ M   G +KPN+  YN +++  C+ +   EA  ++ +M       D VT+N +   
Sbjct: 307 EILNRMPSYG-LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + QNG  D+  E++ +M  +G  P+  T   +I+G+CKEG I EA+   ++M   G  PN
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V + +++KG          +E+++ M +    P+ +T++T++N     G +++  E+  
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G  PD  +YS +  G  +  + E+A ELL  M+  G  PN +I+++I      +G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +++ I++FD + +  +  +   +  ++    +  +  RA +    M + G  P +ST+ 
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
           +L +   + GL KEA+ +LS++ ++
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCSR 630



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 209/444 (47%), Gaps = 1/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L  RG+  +A  + + +   G  P    Y  +L A      F +   ++  +   G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              D+   N V+NA  E G ++EA+    K+   G      +YN ++KG  +A +  +  
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+D M R  +  PN+ T+N L+   C          V+ +M+  G  PD+  Y TI   
Sbjct: 237 ELMDEMVRV-DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G  + A E++  M   G++PN      ++ G C   + KEA      M +     +
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V FN+L+  F +    D V E+L  M      PDVITY+T++N +   G +D+   +  
Sbjct: 356 DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 415

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G KP+  +Y+I+ KG         AEEL+  MI+ G  PN V F T+I+  C  G
Sbjct: 416 SMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 475

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +++AIE+  +M  +G SP+L ++ T++ G  +A +   A E+L +M   G+ P    + 
Sbjct: 476 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYS 535

Query: 498 LLAEARRATGLTKEAKRILSKIKN 521
            +A A    G   +  ++   IK+
Sbjct: 536 SIACALSREGRVNKVIQMFDNIKD 559



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 197/418 (47%), Gaps = 1/418 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P+  T+  ++  L  + R      ++ ++   G  P    ++ ++ A   SG    ++  
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
              M   G T  T   N ++      G  +E+V LL  ++  G  + ++ +YN +++  C
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG-CEADIVSYNAVLKGLC 227

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
             K   +   +M +M      P++VT+NT+     +NG  ++  EV+ +M  +G  P+ R
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
               II G CKEG ++ A      M  YG+ PN+V +N ++KG          +E+L+ M
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            +     D +T++ +++ +   G +D+  E+ + M   G  PD   Y+ +  G+ +E   
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           ++A  LL +M   G  PN V +T ++ G CS G    A E+  +M + G  PN  TF TL
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +    +     +A E+L+ M   G  P   ++  + +     G T+EA  +L+ + NK
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 188/398 (47%), Gaps = 34/398 (8%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           + + + + ++     P++VT+ TL+  L     F  +H +++Q+ E+G  PD   +  +I
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL--------- 200
           +   + G++E A +   +M   GL P    YNT++KG   A + +E+ +LL         
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353

Query: 201 ----------DLMSREGNVK---------------PNLRTYNVLVRAWCNEKNITEAWNV 235
                     D   + G V                P++ TY  ++  +C E  I EA  +
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
           +  M++ G KP+ V+Y  +       G    AEE++ +M   G  PN  T   +I+  CK
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           +G +++A+   + M   G  P+L+ ++ +I G  +    +   E+L +M    ++P+ I 
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           YS+I  A S  G ++K  ++FD++    I+ DA  Y+ +     +  E ++A +    M+
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
            +G  PN   +T +I G  S+G    A E+  ++C  G
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 168/375 (44%), Gaps = 39/375 (10%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           YN ++ GY  AG+   + +L   +     V PN  T+  +VR  C    I +A  V+ +M
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAAAVP----VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
           +  G  P    Y+ I  A  ++G    +  V+  M   G   +   C ++++  C++G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            EA+   R +  +G   ++V +N ++KG         V+E++  M      P+++T++T+
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +      G  ++  E+   M + G  PD   Y+ +  G  +E   E A E+L  M   G 
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 420 HPNVVIFTTIISGWCS-----------------------------------DGSMDRAIE 444
            PNVV + T++ G CS                                   +G +DR IE
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + ++M  HG  P++ T+ T++ G+ +      A  +L+ M + G  P   ++ ++ +   
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437

Query: 505 ATGLTKEAKRILSKI 519
           + G   +A+ ++S++
Sbjct: 438 SAGRWVDAEELMSQM 452



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 121/231 (52%), Gaps = 1/231 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T ++N   + G   EA  +  ++   G KP+ V+YT +L  L    R+     +MS
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G  P+ + FN +IN   + G +E+A++   +M  +G +P   +Y+T+I G G AG
Sbjct: 451 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K EE+++LL++M  +G + PN   Y+ +  A   E  + +   +   +  + ++ D V Y
Sbjct: 511 KTEEALELLNVMVNKG-ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           N + ++  +  E D+A +    M  NG  PN  T  ++I G   EG  KEA
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA 620



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 3/276 (1%)

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           VV YN +   Y + G+   A  +   +    V PN  T   ++ G C  G+I +AL    
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M   G  P   +++++++             VL  M       D    + ++NA    G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +D+   +   +   G + D  +Y+ + KG    +     EEL+  M+     PN+V F 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T+I   C +G  +R  EV  +M EHG +P+++ + T++ G  +      A EIL  M ++
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           G+ P    +  + +   +    KEA+ +LS++  K+
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 76/140 (54%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + +++ L + GK +EA  + N ++  G  P+ + Y+++  AL+ + R N +  +   +
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++  +  D++ +NAVI++  +    + A+D F  M  +G  P  STY  LIKG    G  
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 194 EESVKLLDLMSREGNVKPNL 213
           +E+ +LL  +   G ++ +L
Sbjct: 618 KEAQELLSELCSRGALRKHL 637


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 209/431 (48%), Gaps = 4/431 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+      GK ++A  I   L   G  P ++TY  L+       +   I   + 
Sbjct: 142 VIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYC---KSGEIDKALQ 198

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +E   + PD + +N ++ +  +SG ++EAM+   +  +    P   TY  LI+      
Sbjct: 199 VLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCNDS 258

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              +++KLLD M ++G  KP++ TYNVL+   C E  + EA   ++ M   G +P+V+T+
Sbjct: 259 GVGQAMKLLDEMRKKG-CKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITH 317

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N I  +    G    AE ++ +M   G  P+  T  I+I+  C++  +  A+     M +
Sbjct: 318 NIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK 377

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           +G  PN + +N L+ GF +    D   E L +M      PD++TY+T++ A    G  D 
Sbjct: 378 HGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKADA 437

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             EI + +   G  P    Y+ +  G  +  + E A ELL  M   G  P+++ ++T++ 
Sbjct: 438 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLR 497

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G   +G +D AI++F  M    + P+  T+  +M G  +A+Q  RA + L  M   G  P
Sbjct: 498 GLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKP 557

Query: 492 QKSTFLLLAEA 502
            K+T+ +L E 
Sbjct: 558 TKATYTILIEG 568



 Score =  211 bits (538), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 200/377 (53%), Gaps = 4/377 (1%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD I   ++I  F  SG   +A      ++ SG  P   TYN LI GY  +G+ ++++++
Sbjct: 140 PDVIACTSLIRGFCRSGKTRKATRIMEILENSGAVPDVITYNVLIGGYCKSGEIDKALQV 199

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           L+ MS    V P++ TYN ++R+ C+   + EA  V+ +       PDV+TY  +  A  
Sbjct: 200 LERMS----VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATC 255

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
            +    QA +++ EM   G +P+  T  ++I+G CKEG++ EA++F   M  YG  PN++
Sbjct: 256 NDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVI 315

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
             N++++           + +LA M     +P V+T++ ++N       + +  ++ + M
Sbjct: 316 THNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKM 375

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            K G  P++ +Y+ L  G+ +E++ ++A E L  M+  G +P++V + T+++  C DG  
Sbjct: 376 PKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKA 435

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D A+E+ +++   G SP L T+ T++ G ++  +   A E+L+ M+  G+ P   T+  L
Sbjct: 436 DAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTL 495

Query: 500 AEARRATGLTKEAKRIL 516
                  G   EA +I 
Sbjct: 496 LRGLGCEGKVDEAIKIF 512



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 161/369 (43%), Gaps = 36/369 (9%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M +E    V + T L+ +        +A  + + + + G KP +VTY  L+  +  + R 
Sbjct: 236 MQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEGRL 295

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +     ++ +   G  P+ I  N ++ +   +G   +A      M   G +P+  T+N L
Sbjct: 296 DEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSVVTFNIL 355

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I           ++ +L+ M + G + PN  +YN L+  +C EK +  A   +  M + G
Sbjct: 356 INFLCRKRLLGRAIDVLEKMPKHGCM-PNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRG 414

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             PD+VTYNT+ TA  ++G+AD A E++ ++   G  P   T   +I G  K GK + A 
Sbjct: 415 CYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAA 474

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M+  G+ P+++                                   TYST++   
Sbjct: 475 ELLEEMRRKGLKPDII-----------------------------------TYSTLLRGL 499

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G +D+  +IF DM    IKP A  Y+ +  G  + Q+  +A + L  M+E G  P  
Sbjct: 500 GCEGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTK 559

Query: 424 VIFTTIISG 432
             +T +I G
Sbjct: 560 ATYTILIEG 568



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 88/341 (25%), Positives = 162/341 (47%), Gaps = 38/341 (11%)

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N+ +R       + E    + +M   G  PDV+   ++   + ++G+  +A  ++  +E+
Sbjct: 111 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILEN 170

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF-------- 328
           +G  P+  T  ++I GYCK G+I +AL+    M    V P++V +N +++          
Sbjct: 171 SGAVPDVITYNVLIGGYCKSGEIDKALQVLERM---SVAPDVVTYNTILRSLCDSGKLKE 227

Query: 329 -VEIMDR-----------------------DGVDEVLALMKEFR---VNPDVITYSTIMN 361
            +E++DR                        GV + + L+ E R     PDV+TY+ ++N
Sbjct: 228 AMEVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLIN 287

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                G +D+  +  ++M   G +P+   ++I+ +          AE LL  M+  G  P
Sbjct: 288 GICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSP 347

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +VV F  +I+  C    + RAI+V +KM +HG  PN  ++  L+ G+ + ++  RA E L
Sbjct: 348 SVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYL 407

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +IM + G +P   T+  L  A    G    A  IL+++ +K
Sbjct: 408 EIMVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSK 448



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 151/302 (50%), Gaps = 2/302 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K+ C+  V +   L+N + + G+  EA    NN+   G +P+++T+  +L ++    R
Sbjct: 270 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGR 329

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +     +++ +   G  P  + FN +IN       +  A+D   KM + G  P + +YN 
Sbjct: 330 WMDAERLLADMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNP 389

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ G+    K + +++ L++M   G   P++ TYN L+ A C +     A  +++++++ 
Sbjct: 390 LLHGFCQEKKMDRAIEYLEIMVSRG-CYPDIVTYNTLLTALCKDGKADAAVEILNQLSSK 448

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P ++TYNT+     + G+ + A E++ EM   G++P+  T   ++ G   EGK+ EA
Sbjct: 449 GCSPVLITYNTVIDGLTKVGKTEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEA 508

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           ++    M+   + P+ V +N ++ G  +        + LA M E    P   TY+ ++  
Sbjct: 509 IKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEG 568

Query: 363 WS 364
            +
Sbjct: 569 IA 570



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 36/134 (26%), Positives = 67/134 (50%), Gaps = 3/134 (2%)

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           A +I  +  VR  E E+  + L  MI  G  P+V+  T++I G+C  G   +A  + + +
Sbjct: 109 ASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEIL 168

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G  P++ T+  L+ GY ++ +  +A   LQ+++   V P   T+  +  +   +G  
Sbjct: 169 ENSGAVPDVITYNVLIGGYCKSGEIDKA---LQVLERMSVAPDVVTYNTILRSLCDSGKL 225

Query: 510 KEAKRILSKIKNKE 523
           KEA  +L +   +E
Sbjct: 226 KEAMEVLDRQMQRE 239


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 224/461 (48%), Gaps = 36/461 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++  ++N+L + GK ++     + + E G  P +VTY TL++A + Q        +M 
Sbjct: 225 VYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMH 284

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  P    +N VIN   + G  E A + F +M  SGL+P ++TY +L+      G
Sbjct: 285 AMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 344

Query: 192 KPEES-------------------VKLLDLMSREGNVK---------------PNLRTYN 217
              E+                     ++ L +R GN+                P+   Y 
Sbjct: 345 DAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 404

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +L++ +C +  I+EA N+ ++M   G   DVVTYNTI     +     +A+++  EM   
Sbjct: 405 ILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 464

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G+ P+  T  I+I G+CK G ++ A+   + MKE  +  ++V +N L+ GF ++ D D  
Sbjct: 465 GLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTA 524

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E+ A M    + P  I++S ++NA  + G + +   ++D+M    IKP     + + KG
Sbjct: 525 KEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKG 584

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH--GVS 455
           Y R       E  L  MI  GF P+ + + T+I G+  + +M +A  +  KM E   G+ 
Sbjct: 585 YCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLV 644

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           P++ T+ +++ G+    Q   AE +L+ M   GV+P +ST+
Sbjct: 645 PDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTY 685



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 201/425 (47%), Gaps = 38/425 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++N L + GK + A+ +F  ++  G  P   TY +LL     +       +I S
Sbjct: 295 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFS 354

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +    + PD + F+++++ F+ SGN+++A+  F  +KE+GL P    Y  LI+GY   G
Sbjct: 355 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 414

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD---- 247
              E++ L + M ++G    ++ TYN ++   C  K + EA  + ++M   G+ PD    
Sbjct: 415 MISEAMNLRNEMLQQG-CAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTL 473

Query: 248 -------------------------------VVTYNTIATAYAQNGEADQAEEVIVEMEH 276
                                          VVTYNT+   + + G+ D A+E+  +M  
Sbjct: 474 TILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVS 533

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
             + P   +  I+++  C +G + EA R    M    + P ++I N +IKG+    +   
Sbjct: 534 KEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASD 593

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM--GKAGIKPDAHAYSIL 394
            +  L  M      PD I+Y+T++  +     M K   +   M   + G+ PD   Y+ +
Sbjct: 594 GEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSI 653

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G+ RE + ++AE +L  MIE G +P+   +T++I+G+ S  ++  A    D+M + G 
Sbjct: 654 LHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQRGF 713

Query: 455 SPNLK 459
           SP+ K
Sbjct: 714 SPDDK 718



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 219/453 (48%), Gaps = 19/453 (4%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  S++ +++ L+  G+  +AQ+    +I    + S V+   ++         NS+ S  
Sbjct: 102 TSLSLSAMIHILVRSGRLSDAQSCVLRMI----RRSGVSRVEIV---------NSLVSTY 148

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S    N    DS+F + +I  F ++  + EA + F  ++  G T +    N LI      
Sbjct: 149 SNCGSN----DSVF-DLLIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRI 203

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E + ++   +SR G V  N+ T N++V A C +  + +    + ++   G+ PD+VT
Sbjct: 204 GWVELAWRIYQEISRSG-VGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVT 262

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+ +AY+  G  ++A E++  M   G  P   T   +I+G CK GK + A      M 
Sbjct: 263 YNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 322

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P+   +  L+    +  D    + + + M+   V PD++ +S++M+ ++ +G +D
Sbjct: 323 RSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 382

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K    F+ + +AG+ PD   Y+IL +GY R+    +A  L   M++ G   +VV + TI+
Sbjct: 383 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTIL 442

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C    +  A ++F++M E G+ P+  T   L+ G+ +      A E+ + MK   + 
Sbjct: 443 HGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIK 502

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
               T+  L +     G    AK I + + +KE
Sbjct: 503 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 535



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 184/377 (48%), Gaps = 1/377 (0%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           NA+I +    G +E A   + ++  SG+     T N ++      GK E+    L  +  
Sbjct: 194 NALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQE 253

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G V P++ TYN L+ A+ ++  + EA+ +MH M + G  P V TYNT+     ++G+ +
Sbjct: 254 KG-VYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYE 312

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A+EV  EM  +G+ P+  T   ++   CK+G   E       M+   V P+LV F+ ++
Sbjct: 313 RAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMM 372

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
             F    + D        +KE  + PD + Y+ ++  +   G + +   + ++M + G  
Sbjct: 373 SLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCA 432

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
            D   Y+ +  G  + +   +A++L   M E G  P+    T +I G C  G++  A+E+
Sbjct: 433 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMEL 492

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F KM E  +  ++ T+ TL+ G+ +      A+EI   M +  + P   +F +L  A  +
Sbjct: 493 FKKMKEKRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCS 552

Query: 506 TGLTKEAKRILSKIKNK 522
            G   EA R+  ++ +K
Sbjct: 553 KGHLSEAFRVWDEMISK 569



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 91/186 (48%), Gaps = 3/186 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ++KE   T  S + L+N+L  +G   EA  +++ +I    KP+++   +++         
Sbjct: 532 VSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNSMIKGYCRSGNA 591

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM--KESGLTPTTSTYN 181
           +     + ++   G  PD I +N +I  F +  NM +A     KM  K+ GL P   TYN
Sbjct: 592 SDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYN 651

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           +++ G+    + +E+  +L  M   G V P+  TY  L+  + ++ N+TEA+    +M  
Sbjct: 652 SILHGFCRENQMKEAEAVLRKMIERG-VNPDRSTYTSLINGFVSQDNLTEAFRFHDEMLQ 710

Query: 242 SGMKPD 247
            G  PD
Sbjct: 711 RGFSPD 716


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 230/452 (50%), Gaps = 3/452 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + ++N     G+  +   +F  +I+ G  P +VTYTT++  L   + F+    +  
Sbjct: 199 VVSYSIVINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQ 258

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ +NG  P++  +N +I+ +   G  +E +    +M   GL P   TY +L+      G
Sbjct: 259 QMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNG 318

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+    D M R+G +KP + TY +L+  +  +  ++E  + +  M  +G+ PD   +
Sbjct: 319 RCREARFFFDSMIRKG-IKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIF 377

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRFARTMK 310
           N   +AYA+ G  D+A ++  +M  +G+ PN    G +I   CK G++ +A ++F + + 
Sbjct: 378 NIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMIN 437

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E GV PN+V+FN L+ G   +   +  +E++  M +  + P+ + ++T++      G + 
Sbjct: 438 E-GVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVM 496

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + + + D M   G++PDA +Y+ L  GY      ++AE++   M+  G  P  V + T++
Sbjct: 497 EGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLL 556

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+CS   +D A  +F +M   GV+P + T+ T++ G  + ++   A+E+   M   G  
Sbjct: 557 HGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 616

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
               T+ ++      +    EA ++   + +K
Sbjct: 617 CDIYTYNIILNGLCKSNCVDEAFKMFQSLCSK 648



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 221/468 (47%), Gaps = 12/468 (2%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           K  C T  S   L+N L + G+ +EA+  F+++I  G KP + TY  L+     +   + 
Sbjct: 301 KPDCYTYGS---LLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKGALSE 357

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
           +HS +  + ENG+ PD   FN   +A+++ G +++AMD F KM++ GL+P    Y  LI 
Sbjct: 358 MHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALID 417

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
                G+ +++    + M  EG V PN+  +N LV   C       A  ++++M   G+ 
Sbjct: 418 ALCKLGRVDDAEVKFNQMINEG-VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGIC 476

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P+ V +NT+       G   +   +I  MEH GV+P+  +   +ISGYC  G+  EA + 
Sbjct: 477 PNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKV 536

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNA 362
              M   G+ P  V +N L+ G+        +D+   L +E     V P V+TY+TI++ 
Sbjct: 537 FDGMVSIGLSPTEVTYNTLLHGYCSA---SRIDDAYCLFREMLRKGVTPGVVTYNTILHG 593

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
                   + KE++ +M  +G K D + Y+I+  G  +    ++A ++  ++   G   N
Sbjct: 594 LFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 653

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           ++ FT +I      G  + A+++F  +  +G+ PN+ T+  +     E       + +  
Sbjct: 654 IITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFS 713

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEA 530
            M+  G  P       L       G    A   LSK+   ER   +EA
Sbjct: 714 AMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKL--DERNFSVEA 759



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 214/483 (44%), Gaps = 34/483 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++ L +      A+ +F  +I+ G KP+  TY  L+       ++  +  ++ 
Sbjct: 234 VVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWKEVVQMLE 293

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD   + +++N   ++G   EA   F  M   G+ P  STY  LI GY   G
Sbjct: 294 EMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILIHGYATKG 353

Query: 192 KPEESVKLLDLMS----------------------------------REGNVKPNLRTYN 217
              E    LDLM                                   R+  + PN+  Y 
Sbjct: 354 ALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYG 413

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            L+ A C    + +A    ++M   G+ P++V +N++        + ++AEE++ EM   
Sbjct: 414 ALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQ 473

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G+ PN      +I   C  G++ E  R    M+  GV P+   +  LI G+      D  
Sbjct: 474 GICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEA 533

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           ++V   M    ++P  +TY+T+++ + +A  +D    +F +M + G+ P    Y+ +  G
Sbjct: 534 EKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHG 593

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             + +   +A+EL + MI SG   ++  +  I++G C    +D A ++F  +C  G+  N
Sbjct: 594 LFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 653

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + TF  ++    +  +   A ++   + A G+ P   T+ L+AE     G  +E   + S
Sbjct: 654 IITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFS 713

Query: 518 KIK 520
            ++
Sbjct: 714 AME 716



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 202/443 (45%), Gaps = 5/443 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSIMSQVEEN 136
           L+      G  +   A F  +++ G +   +    LL  L   KR   ++  ++ ++ E 
Sbjct: 96  LIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQRMPEL 155

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG---LTPTTSTYNTLIKGYGIAGKP 193
           G  PD++ +  ++         EEA++    M +       P   +Y+ +I G+   G+ 
Sbjct: 156 GCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQV 215

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++   L   M   G + P++ TY  ++   C  +    A  V  +M  +G KP+  TYN 
Sbjct: 216 DKPYNLFLEMIDRG-IPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNC 274

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y   G+  +  +++ EM   G++P+  T G +++  CK G+ +EA  F  +M   G
Sbjct: 275 LIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKG 334

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P +  + +LI G+        +   L LM E  ++PD   ++   +A++  G +DK  
Sbjct: 335 IKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAM 394

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           +IF+ M + G+ P+   Y  L     +    + AE     MI  G  PN+V+F +++ G 
Sbjct: 395 DIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGL 454

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C+    +RA E+  +M + G+ PN   F TL+       +      ++ +M+  GV P  
Sbjct: 455 CTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDA 514

Query: 494 STFLLLAEARRATGLTKEAKRIL 516
            ++  L      TG T EA+++ 
Sbjct: 515 FSYTPLISGYCLTGRTDEAEKVF 537



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 191/423 (45%), Gaps = 13/423 (3%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL + L+   +P   +A FN+L+    +    + + L  +      FN     M +   +
Sbjct: 35  KLFDELLHHARPASVRA-FNHLLTAVSRARCSSASELAVS-----HFNR----MVRECSD 84

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            + P+   ++ +I  F   G++E     F  + ++G        N L+KG     +  E+
Sbjct: 85  KVAPNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEA 144

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK---PDVVTYNT 253
           + +L     E    P+  +Y +L++  CNEK   EA  ++H MA    +   P+VV+Y+ 
Sbjct: 145 MDVLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSI 204

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +   G+ D+   + +EM   G+ P+  T   +I G CK      A    + M + G
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 264

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             PN   +N LI G++ I     V ++L  M    + PD  TY +++N     G   + +
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREAR 324

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
             FD M + GIKP    Y IL  GY  +    +    L  M+E+G  P+  IF    S +
Sbjct: 325 FFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 384

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G +D+A+++F+KM +HG+SPN+  +  L+    +  +   AE     M   GV P  
Sbjct: 385 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 444

Query: 494 STF 496
             F
Sbjct: 445 VVF 447



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 178/359 (49%), Gaps = 1/359 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++L + G+  +A+  FN +I  G  P++V + +L+  L    ++     ++ ++ + G
Sbjct: 415 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 474

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+++FFN +I      G + E       M+  G+ P   +Y  LI GY + G+ +E+ 
Sbjct: 475 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAE 534

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+ D M   G + P   TYN L+  +C+   I +A+ +  +M   G+ P VVTYNTI   
Sbjct: 535 KVFDGMVSIG-LSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHG 593

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             Q     +A+E+ + M ++G + +  T  II++G CK   + EA +  +++   G+  N
Sbjct: 594 LFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLN 653

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ F ++I   ++   ++   ++ A +    + P+V+TY  +       G +++   +F 
Sbjct: 654 IITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFS 713

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            M K G  P++   + L +  +   +  +A   L  + E  F       + ++S + SD
Sbjct: 714 AMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSD 772



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/395 (23%), Positives = 171/395 (43%), Gaps = 19/395 (4%)

Query: 145 FNAVINAFSE---SGNMEEAMDTFWKMKE---SGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           FN ++ A S    S   E A+  F +M       + P   TY+ LI  +   G  E    
Sbjct: 52  FNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNLCTYSILIGRFCRMGHLEHGFA 111

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM-HKMAASGMKPDVVTYNTIATA 257
              L+ + G    ++   N L++  C+ K + EA +V+  +M   G  PD V+Y  +   
Sbjct: 112 AFGLILKTGWRMDHI-AINQLLKGLCHGKRVGEAMDVLLQRMPELGCMPDTVSYTILLKG 170

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTC-------GIIISGYCKEGKIKEALRFARTMK 310
                 A++A    +E+ H     +GR C        I+I+G+  EG++ +       M 
Sbjct: 171 LCNEKRAEEA----LELLHMMADDHGRRCPPNVVSYSIVINGFFTEGQVDKPYNLFLEMI 226

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G+ P++V +  +I G  +    D  + V   M +    P+  TY+ +++ + + G   
Sbjct: 227 DRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNYTYNCLIHGYLSIGKWK 286

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  ++ ++M   G+KPD + Y  L     +     +A     +MI  G  P V  +  +I
Sbjct: 287 EVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSMIRKGIKPKVSTYGILI 346

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+ + G++       D M E+G+SP+   F      Y++     +A +I   M+  G+ 
Sbjct: 347 HGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLS 406

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
           P    +  L +A    G   +A+   +++ N+  T
Sbjct: 407 PNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVT 441



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 62/312 (19%), Positives = 143/312 (45%), Gaps = 1/312 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++  C        L+ +L   G+  E + + + +   G +P   +YT L++   +  R 
Sbjct: 471 LDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRT 530

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +   +   G+ P  + +N +++ +  +  +++A   F +M   G+TP   TYNT+
Sbjct: 531 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTI 590

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           + G     +  E+ +L   M   G  K ++ TYN+++   C    + EA+ +   + + G
Sbjct: 591 LHGLFQTKRFSEAKELYLNMINSGT-KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG 649

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++ +++T+  +  A  + G  + A ++   +  NG+ PN  T  ++     +EG ++E  
Sbjct: 650 LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFD 709

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M++ G  PN  + N L++  +   D       L+ + E   + +  T S +M+ +
Sbjct: 710 SLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIF 769

Query: 364 STAGFMDKCKEI 375
           ++  +    K +
Sbjct: 770 TSDEYQHHAKSL 781


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 226/445 (50%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N++ E+G   EA  +   L   G +  +V+Y  +L  L + KR+  +  +M ++    
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + FN +I     +G  E   +   +M E G TP    Y T+I G    G  E + 
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L+ M   G +KPN+  YN +++  C+ +   EA  ++ +M       D VT+N +   
Sbjct: 307 EILNRMPSYG-LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + QNG  D+  E++ +M  +G  P+  T   +I+G+CKEG I EA+   ++M   G  PN
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V + +++KG          +E+++ M +    P+ +T++T++N     G +++  E+  
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G  PD  +YS +  G  +  + E+A ELL  M+  G  PN +I+++I      +G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +++ I++FD + +  +  +   +  ++    +  +  RA +    M + G  P +ST+ 
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
           +L +   + GL KEA+ +LS++ ++
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCSR 630



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 209/444 (47%), Gaps = 1/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L  RG+  +A  + + +   G  P    Y  +L A      F +   ++  +   G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              D+   N V+NA  E G ++EA+    K+   G      +YN ++KG  +A +  +  
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+D M R  +  PN+ T+N L+   C          V+ +M+  G  PD+  Y TI   
Sbjct: 237 ELMDEMVRV-DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G  + A E++  M   G++PN      ++ G C   + KEA      M +     +
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V FN+L+  F +    D V E+L  M      PDVITY+T++N +   G +D+   +  
Sbjct: 356 DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 415

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G KP+  +Y+I+ KG         AEEL+  MI+ G  PN V F T+I+  C  G
Sbjct: 416 SMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 475

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +++AIE+  +M  +G SP+L ++ T++ G  +A +   A E+L +M   G+ P    + 
Sbjct: 476 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYS 535

Query: 498 LLAEARRATGLTKEAKRILSKIKN 521
            +A A    G   +  ++   IK+
Sbjct: 536 SIACALSREGRVNKVIQMFDNIKD 559



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 197/418 (47%), Gaps = 1/418 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P+  T+  ++  L  + R      ++ ++   G  P    ++ ++ A   SG    ++  
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
              M   G T  T   N ++      G  +E+V LL  ++  G  + ++ +YN +++  C
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG-CEADIVSYNAVLKGLC 227

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
             K   +   +M +M      P++VT+NT+     +NG  ++  EV+ +M  +G  P+ R
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
               II G CKEG ++ A      M  YG+ PN+V +N ++KG          +E+L+ M
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            +     D +T++ +++ +   G +D+  E+ + M   G  PD   Y+ +  G+ +E   
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           ++A  LL +M   G  PN V +T ++ G CS G    A E+  +M + G  PN  TF TL
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +    +     +A E+L+ M   G  P   ++  + +     G T+EA  +L+ + NK
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 188/398 (47%), Gaps = 34/398 (8%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           + + + + ++     P++VT+ TL+  L     F  +H +++Q+ E+G  PD   +  +I
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL--------- 200
           +   + G++E A +   +M   GL P    YNT++KG   A + +E+ +LL         
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353

Query: 201 ----------DLMSREGNVK---------------PNLRTYNVLVRAWCNEKNITEAWNV 235
                     D   + G V                P++ TY  ++  +C E  I EA  +
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
           +  M++ G KP+ V+Y  +       G    AEE++ +M   G  PN  T   +I+  CK
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           +G +++A+   + M   G  P+L+ ++ +I G  +    +   E+L +M    ++P+ I 
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           YS+I  A S  G ++K  ++FD++    I+ DA  Y+ +     +  E ++A +    M+
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
            +G  PN   +T +I G  S+G    A E+  ++C  G
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 168/375 (44%), Gaps = 39/375 (10%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           YN ++ GY  AG+   + +L   +     V PN  T+  +VR  C    I +A  V+ +M
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAAAVP----VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
           +  G  P    Y+ I  A  ++G    +  V+  M   G   +   C ++++  C++G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            EA+   R +  +G   ++V +N ++KG         V+E++  M      P+++T++T+
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +      G  ++  E+   M + G  PD   Y+ +  G  +E   E A E+L  M   G 
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 420 HPNVVIFTTIISGWCS-----------------------------------DGSMDRAIE 444
            PNVV + T++ G CS                                   +G +DR IE
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + ++M  HG  P++ T+ T++ G+ +      A  +L+ M + G  P   ++ ++ +   
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437

Query: 505 ATGLTKEAKRILSKI 519
           + G   +A+ ++S++
Sbjct: 438 SAGRWVDAEELMSQM 452



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 121/231 (52%), Gaps = 1/231 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T ++N   + G   EA  +  ++   G KP+ V+YT +L  L    R+     +MS
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G  P+ + FN +IN   + G +E+A++   +M  +G +P   +Y+T+I G G AG
Sbjct: 451 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K EE+++LL++M  +G + PN   Y+ +  A   E  + +   +   +  + ++ D V Y
Sbjct: 511 KTEEALELLNVMVNKG-ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           N + ++  +  E D+A +    M  NG  PN  T  ++I G   EG  KEA
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA 620



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 3/276 (1%)

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           VV YN +   Y + G+   A  +   +    V PN  T   ++ G C  G+I +AL    
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M   G  P   +++++++             VL  M       D    + ++NA    G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +D+   +   +   G + D  +Y+ + KG    +     EEL+  M+     PN+V F 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T+I   C +G  +R  EV  +M EHG +P+++ + T++ G  +      A EIL  M ++
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           G+ P    +  + +   +    KEA+ +LS++  K+
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 76/140 (54%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + +++ L + GK +EA  + N ++  G  P+ + Y+++  AL+ + R N +  +   +
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++  +  D++ +NAVI++  +    + A+D F  M  +G  P  STY  LIKG    G  
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 194 EESVKLLDLMSREGNVKPNL 213
           +E+ +LL  +   G ++ +L
Sbjct: 618 KEAQELLSELCSRGALRKHL 637


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 236/501 (47%), Gaps = 56/501 (11%)

Query: 69  CR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           CR  V + T LMN L   G+  EA A+ + ++E G +P  +TY T +  +       S  
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 128 SIMSQVEE-NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
           +++ ++EE + + P+ + ++A+I+   + G   ++ + F +M++ G+ P   TYN +I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
           + I+G+   + +LL  M  E  + PN+ TYN L+ A+  E    EA  +  +M   G+ P
Sbjct: 298 FCISGRWSAAQRLLQEM-LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIP 356

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           + +TYN++   + +    D AE++   M   G  P+  T   +I GYC   +I + +   
Sbjct: 357 NTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELL 416

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDR--------------------------DGV--- 337
             M   G+  N V +N LI GF  + D                           DG+   
Sbjct: 417 HEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDN 476

Query: 338 ---DEVLALMKEFR--------------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
               + L + K  +              V PDV+TY+ ++      G   + +E++++M 
Sbjct: 477 GKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMP 536

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             GI PD   YS +  G  ++   ++A ++ ++M    F PNVV F T+I+G+C  G +D
Sbjct: 537 HRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVD 596

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST----- 495
             +E+F +M   G+  +   + TL++G+ +      A +I Q M + GV+P   T     
Sbjct: 597 DGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNML 656

Query: 496 --FLLLAEARRATGLTKEAKR 514
             F    E  RA  + ++ +R
Sbjct: 657 TGFWSKEELERAVAMLEDLQR 677



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 218/423 (51%), Gaps = 12/423 (2%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +++ L + G+  ++  +F  + + G  P++VTY  ++    I  R+++   ++ ++ E
Sbjct: 257 SAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLE 316

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + P+ + +NA+INAF + G   EA + + +M   G+ P T TYN++I G+    + + 
Sbjct: 317 RKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDA 376

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  +  LM+ +G   P++ T+  L+  +C  K I +   ++H+M   G+  + VTYNT+ 
Sbjct: 377 AEDMFYLMATKG-CSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLI 435

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY--- 312
             +   G+ + A ++  +M  +GV P+  TC  ++ G C  GK+K+AL   + M++    
Sbjct: 436 HGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMD 495

Query: 313 --------GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
                   GV P+++ +N+LI G +        +E+   M    + PD ITYS++++   
Sbjct: 496 LDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLC 555

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
               +D+  ++F  MG     P+   ++ L  GY +    +   EL   M   G   + +
Sbjct: 556 KQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAI 615

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           I+ T+I G+   G+++ A+++F +M   GV P+  T   ++ G+    +  RA  +L+ +
Sbjct: 616 IYITLIYGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675

Query: 485 KAF 487
           + +
Sbjct: 676 QRY 678



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 214/453 (47%), Gaps = 20/453 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S T L+       K   A + F  L + G  P +VT+TTLL  L +  R +    +  
Sbjct: 116 IYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFH 175

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+      PD + F  ++N     G + EA+    +M E+GL P   TY T + G    G
Sbjct: 176 QICR----PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMG 231

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++ LL  M    ++KPN+  Y+ ++   C +   +++ N+  +M   G+ P++VTY
Sbjct: 232 DTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTY 291

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   +  +G    A+ ++ EM    + PN  T   +I+ + KEGK  EA      M  
Sbjct: 292 NCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLP 351

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN + +N +I GF +    D  +++  LM     +PDV T++T+++ +  A  +D 
Sbjct: 352 RGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDD 411

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+  +M + G+  +   Y+ L  G+    +   A +L   MI SG  P++V   T++ 
Sbjct: 412 GMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLD 471

Query: 432 GWCSDGSMDRAIEVFDKMCE-----------HGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           G C +G +  A+E+F  M +           +GV P++ T+  L+ G     +   AEE+
Sbjct: 472 GLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEEL 531

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            + M   G+ P   T+     +    GL K+++
Sbjct: 532 YEEMPHRGIVPDTITY-----SSMIDGLCKQSR 559



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/453 (25%), Positives = 223/453 (49%), Gaps = 10/453 (2%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           ++A  +F++++     PS++ +  L+ A+   +R + + S+  ++E   +  D   F  +
Sbjct: 63  EDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTIL 122

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           I  F     +  A+ TF K+ + GL P   T+ TL+ G  +  +  E++ L   + R   
Sbjct: 123 IKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR--- 179

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
             P++ T+  L+   C E  + EA  ++ +M  +G++PD +TY T      + G+   A 
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 269 EVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
            ++ +ME  + ++PN      II G CK+G+  ++      M++ G+ PN+V +N +I G
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           F           +L  M E +++P+V+TY+ ++NA+   G   +  E++D+M   GI P+
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ +  G+ ++   + AE++   M   G  P+V  FTT+I G+C    +D  +E+  
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           +M   G+  N  T+ TL+ G+        A ++ Q M + GV P   T   L +     G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 508 LTKEAKRILSKIKNKERTNEMEAEEDIPVESLE 540
             K+A  +   ++     ++M+ +   P   +E
Sbjct: 478 KLKDALEMFKAMQK----SKMDLDASHPFNGVE 506



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 196/416 (47%), Gaps = 6/416 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V    KLM +++   +P    +++  +     +  + ++T L+       +     S  
Sbjct: 80  SVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTILIKCFCSCSKLPFALSTF 139

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G+ PD + F  +++       + EA+D F ++      P   T+ TL+ G    
Sbjct: 140 GKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQI----CRPDVLTFTTLMNGLCRE 195

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM-AASGMKPDVV 249
           G+  E+V LLD M   G ++P+  TY   V   C   +   A N++ KM   S +KP+VV
Sbjct: 196 GRVVEAVALLDRMVENG-LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVV 254

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y+ I     ++G    +  + +EM+  G+ PN  T   +I G+C  G+   A R  + M
Sbjct: 255 IYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEM 314

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            E  + PN+V +N LI  FV+        E+   M    + P+ ITY+++++ +     +
Sbjct: 315 LERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRL 374

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D  +++F  M   G  PD   ++ L  GY   +  +   ELL  M   G   N V + T+
Sbjct: 375 DAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTL 434

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           I G+C  G ++ A+++  +M   GV P++ T  TL+ G  +  +   A E+ + M+
Sbjct: 435 IHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQ 490


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 226/445 (50%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N++ E+G   EA  +   L   G +  +V+Y  +L  L + KR+  +  +M ++    
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + FN +I     +G  E   +   +M E G TP    Y T+I G    G  E + 
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L+ M   G +KPN+  YN +++  C+ +   EA  ++ +M       D VT+N +   
Sbjct: 307 EILNRMPSYG-LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + QNG  D+  E++ +M  +G  P+  T   +I+G+CKEG I EA+   ++M   G  PN
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V + +++KG          +E+++ M +    P+ +T++T++N     G +++  E+  
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G  PD  +YS +  G  +  + E+A ELL  M+  G  PN +I+++I      +G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +++ I++FD + +  +  +   +  ++    +  +  RA +    M + G  P +ST+ 
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
           +L +   + GL KEA+ +LS++ ++
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCSR 630



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 209/444 (47%), Gaps = 1/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L  RG+  +A  + + +   G  P    Y  +L A      F +   ++  +   G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              D+   N V+NA  E G ++EA+    K+   G      +YN ++KG  +A +  +  
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+D M R  +  PN+ T+N L+   C          V+ +M+  G  PD+  Y TI   
Sbjct: 237 ELMDEMVRV-DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G  + A E++  M   G++PN      ++ G C   + KEA      M +     +
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V FN+L+  F +    D V E+L  M      PDVITY+T++N +   G +D+   +  
Sbjct: 356 DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 415

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G KP+  +Y+I+ KG         AEEL+  MI+ G  PN V F T+I+  C  G
Sbjct: 416 SMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 475

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +++AIE+  +M  +G SP+L ++ T++ G  +A +   A E+L +M   G+ P    + 
Sbjct: 476 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYS 535

Query: 498 LLAEARRATGLTKEAKRILSKIKN 521
            +A A    G   +  ++   IK+
Sbjct: 536 SIACALSREGRVNKVIQMFDNIKD 559



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 197/418 (47%), Gaps = 1/418 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P+  T+  ++  L  + R      ++ ++   G  P    ++ ++ A   SG    ++  
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
              M   G T  T   N ++      G  +E+V LL  ++  G  + ++ +YN +++  C
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG-CEADIVSYNAVLKGLC 227

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
             K   +   +M +M      P++VT+NT+     +NG  ++  EV+ +M  +G  P+ R
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
               II G CKEG ++ A      M  YG+ PN+V +N ++KG          +E+L+ M
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            +     D +T++ +++ +   G +D+  E+ + M   G  PD   Y+ +  G+ +E   
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           ++A  LL +M   G  PN V +T ++ G CS G    A E+  +M + G  PN  TF TL
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +    +     +A E+L+ M   G  P   ++  + +     G T+EA  +L+ + NK
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 188/398 (47%), Gaps = 34/398 (8%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           + + + + ++     P++VT+ TL+  L     F  +H +++Q+ E+G  PD   +  +I
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL--------- 200
           +   + G++E A +   +M   GL P    YNT++KG   A + +E+ +LL         
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353

Query: 201 ----------DLMSREGNVK---------------PNLRTYNVLVRAWCNEKNITEAWNV 235
                     D   + G V                P++ TY  ++  +C E  I EA  +
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
           +  M++ G KP+ V+Y  +       G    AEE++ +M   G  PN  T   +I+  CK
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           +G +++A+   + M   G  P+L+ ++ +I G  +    +   E+L +M    ++P+ I 
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           YS+I  A S  G ++K  ++FD++    I+ DA  Y+ +     +  E ++A +    M+
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
            +G  PN   +T +I G  S+G    A E+  ++C  G
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 168/375 (44%), Gaps = 39/375 (10%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           YN ++ GY  AG+   + +L   +     V PN  T+  +VR  C    I +A  V+ +M
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAAAVP----VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
           +  G  P    Y+ I  A  ++G    +  V+  M   G   +   C ++++  C++G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            EA+   R +  +G   ++V +N ++KG         V+E++  M      P+++T++T+
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +      G  ++  E+   M + G  PD   Y+ +  G  +E   E A E+L  M   G 
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 420 HPNVVIFTTIISGWCS-----------------------------------DGSMDRAIE 444
            PNVV + T++ G CS                                   +G +DR IE
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + ++M  HG  P++ T+ T++ G+ +      A  +L+ M + G  P   ++ ++ +   
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437

Query: 505 ATGLTKEAKRILSKI 519
           + G   +A+ ++S++
Sbjct: 438 SAGRWVDAEELMSQM 452



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 121/231 (52%), Gaps = 1/231 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T ++N   + G   EA  +  ++   G KP+ V+YT +L  L    R+     +MS
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G  P+ + FN +IN   + G +E+A++   +M  +G +P   +Y+T+I G G AG
Sbjct: 451 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K EE+++LL++M  +G + PN   Y+ +  A   E  + +   +   +  + ++ D V Y
Sbjct: 511 KTEEALELLNVMVNKG-ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           N + ++  +  E D+A +    M  NG  PN  T  ++I G   EG  KEA
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA 620



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 3/276 (1%)

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           VV YN +   Y + G+   A  +   +    V PN  T   ++ G C  G+I +AL    
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M   G  P   +++++++             VL  M       D    + ++NA    G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +D+   +   +   G + D  +Y+ + KG    +     EEL+  M+     PN+V F 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T+I   C +G  +R  EV  +M EHG +P+++ + T++ G  +      A EIL  M ++
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           G+ P    +  + +   +    KEA+ +LS++  K+
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 76/140 (54%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + +++ L + GK +EA  + N ++  G  P+ + Y+++  AL+ + R N +  +   +
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++  +  D++ +NAVI++  +    + A+D F  M  +G  P  STY  LIKG    G  
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 194 EESVKLLDLMSREGNVKPNL 213
           +E+ +LL  +   G ++ +L
Sbjct: 618 KEAQELLSELCSRGALRKHL 637


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 226/445 (50%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N++ E+G   EA  +   L   G +  +V+Y  +L  L + KR+  +  +M ++    
Sbjct: 187 VLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVD 246

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + FN +I     +G  E   +   +M E G TP    Y T+I G    G  E + 
Sbjct: 247 CAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVAN 306

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L+ M   G +KPN+  YN +++  C+ +   EA  ++ +M       D VT+N +   
Sbjct: 307 EILNRMPSYG-LKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDF 365

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + QNG  D+  E++ +M  +G  P+  T   +I+G+CKEG I EA+   ++M   G  PN
Sbjct: 366 FCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPN 425

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V + +++KG          +E+++ M +    P+ +T++T++N     G +++  E+  
Sbjct: 426 TVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLK 485

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G  PD  +YS +  G  +  + E+A ELL  M+  G  PN +I+++I      +G
Sbjct: 486 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREG 545

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +++ I++FD + +  +  +   +  ++    +  +  RA +    M + G  P +ST+ 
Sbjct: 546 RVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 605

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
           +L +   + GL KEA+ +LS++ ++
Sbjct: 606 MLIKGLASEGLAKEAQELLSELCSR 630



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 209/444 (47%), Gaps = 1/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L  RG+  +A  + + +   G  P    Y  +L A      F +   ++  +   G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              D+   N V+NA  E G ++EA+    K+   G      +YN ++KG  +A +  +  
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+D M R  +  PN+ T+N L+   C          V+ +M+  G  PD+  Y TI   
Sbjct: 237 ELMDEMVRV-DCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDG 295

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G  + A E++  M   G++PN      ++ G C   + KEA      M +     +
Sbjct: 296 ICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLD 355

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V FN+L+  F +    D V E+L  M      PDVITY+T++N +   G +D+   +  
Sbjct: 356 DVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 415

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G KP+  +Y+I+ KG         AEEL+  MI+ G  PN V F T+I+  C  G
Sbjct: 416 SMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 475

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +++AIE+  +M  +G SP+L ++ T++ G  +A +   A E+L +M   G+ P    + 
Sbjct: 476 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYS 535

Query: 498 LLAEARRATGLTKEAKRILSKIKN 521
            +A A    G   +  ++   IK+
Sbjct: 536 SIACALSREGRVNKVIQMFDNIKD 559



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 197/418 (47%), Gaps = 1/418 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P+  T+  ++  L  + R      ++ ++   G  P    ++ ++ A   SG    ++  
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
              M   G T  T   N ++      G  +E+V LL  ++  G  + ++ +YN +++  C
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFG-CEADIVSYNAVLKGLC 227

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
             K   +   +M +M      P++VT+NT+     +NG  ++  EV+ +M  +G  P+ R
Sbjct: 228 MAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIR 287

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
               II G CKEG ++ A      M  YG+ PN+V +N ++KG          +E+L+ M
Sbjct: 288 MYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEM 347

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            +     D +T++ +++ +   G +D+  E+ + M   G  PD   Y+ +  G+ +E   
Sbjct: 348 FQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLI 407

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           ++A  LL +M   G  PN V +T ++ G CS G    A E+  +M + G  PN  TF TL
Sbjct: 408 DEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTL 467

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +    +     +A E+L+ M   G  P   ++  + +     G T+EA  +L+ + NK
Sbjct: 468 INFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNK 525



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 188/398 (47%), Gaps = 34/398 (8%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           + + + + ++     P++VT+ TL+  L     F  +H +++Q+ E+G  PD   +  +I
Sbjct: 234 DVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATII 293

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL--------- 200
           +   + G++E A +   +M   GL P    YNT++KG   A + +E+ +LL         
Sbjct: 294 DGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCP 353

Query: 201 ----------DLMSREGNVK---------------PNLRTYNVLVRAWCNEKNITEAWNV 235
                     D   + G V                P++ TY  ++  +C E  I EA  +
Sbjct: 354 LDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVML 413

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
           +  M++ G KP+ V+Y  +       G    AEE++ +M   G  PN  T   +I+  CK
Sbjct: 414 LKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCK 473

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           +G +++A+   + M   G  P+L+ ++ +I G  +    +   E+L +M    ++P+ I 
Sbjct: 474 KGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTII 533

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           YS+I  A S  G ++K  ++FD++    I+ DA  Y+ +     +  E ++A +    M+
Sbjct: 534 YSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMV 593

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
            +G  PN   +T +I G  S+G    A E+  ++C  G
Sbjct: 594 SNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCSRG 631



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 87/375 (23%), Positives = 168/375 (44%), Gaps = 39/375 (10%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           YN ++ GY  AG+   + +L   +     V PN  T+  +VR  C    I +A  V+ +M
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAAAVP----VPPNAYTFFPVVRGLCTRGRIADALEVLDEM 137

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
           +  G  P    Y+ I  A  ++G    +  V+  M   G   +   C ++++  C++G +
Sbjct: 138 SFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCV 197

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            EA+   R +  +G   ++V +N ++KG         V+E++  M      P+++T++T+
Sbjct: 198 DEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTL 257

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +      G  ++  E+   M + G  PD   Y+ +  G  +E   E A E+L  M   G 
Sbjct: 258 IGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGL 317

Query: 420 HPNVVIFTTIISGWCS-----------------------------------DGSMDRAIE 444
            PNVV + T++ G CS                                   +G +DR IE
Sbjct: 318 KPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIE 377

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + ++M  HG  P++ T+ T++ G+ +      A  +L+ M + G  P   ++ ++ +   
Sbjct: 378 LLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLC 437

Query: 505 ATGLTKEAKRILSKI 519
           + G   +A+ ++S++
Sbjct: 438 SAGRWVDAEELMSQM 452



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 121/231 (52%), Gaps = 1/231 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T ++N   + G   EA  +  ++   G KP+ V+YT +L  L    R+     +MS
Sbjct: 391 VITYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMS 450

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G  P+ + FN +IN   + G +E+A++   +M  +G +P   +Y+T+I G G AG
Sbjct: 451 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 510

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K EE+++LL++M  +G + PN   Y+ +  A   E  + +   +   +  + ++ D V Y
Sbjct: 511 KTEEALELLNVMVNKG-ISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLY 569

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           N + ++  +  E D+A +    M  NG  PN  T  ++I G   EG  KEA
Sbjct: 570 NAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEA 620



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 3/276 (1%)

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           VV YN +   Y + G+   A  +   +    V PN  T   ++ G C  G+I +AL    
Sbjct: 79  VVAYNAMVAGYCRAGQLAAARRLAAAVP---VPPNAYTFFPVVRGLCTRGRIADALEVLD 135

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M   G  P   +++++++             VL  M       D    + ++NA    G
Sbjct: 136 EMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKGCTLDTGNCNLVLNAICEQG 195

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +D+   +   +   G + D  +Y+ + KG    +     EEL+  M+     PN+V F 
Sbjct: 196 CVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFN 255

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T+I   C +G  +R  EV  +M EHG +P+++ + T++ G  +      A EIL  M ++
Sbjct: 256 TLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSY 315

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           G+ P    +  + +   +    KEA+ +LS++  K+
Sbjct: 316 GLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKD 351



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 76/140 (54%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + +++ L + GK +EA  + N ++  G  P+ + Y+++  AL+ + R N +  +   +
Sbjct: 498 SYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++  +  D++ +NAVI++  +    + A+D F  M  +G  P  STY  LIKG    G  
Sbjct: 558 KDTTIRSDAVLYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLA 617

Query: 194 EESVKLLDLMSREGNVKPNL 213
           +E+ +LL  +   G ++ +L
Sbjct: 618 KEAQELLSELCSRGALRKHL 637


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/499 (28%), Positives = 240/499 (48%), Gaps = 26/499 (5%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++ KL+ +     K  +A  +FN        P++  +T L+  L     F     +  ++
Sbjct: 32  TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKL 91

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            + G   D   +N +I  F  SG ++ AM+ F +MK  G  P   TY  L+   G AG+ 
Sbjct: 92  VQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRV 151

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+    D M   G + PN+ TYN+L+ A+     +  A  +  +M   G +P VVTYN 
Sbjct: 152 QEARSFFDAMLERG-LTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNI 210

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A    G    A ++  +M  +G  P+  T   +++G  K G+++EA +  R M + G
Sbjct: 211 LLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRG 270

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V  +LV +N L+    +  + D V +++  M     +PD  +++TIM+A   A   D  +
Sbjct: 271 VAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAR 330

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+F  M ++G KPD  +Y+IL   Y R  +  +A ++L  M+E+GF P    + ++I   
Sbjct: 331 EVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWL 390

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
            +DG +D A  V ++M   G  P++ T+  LM    +  +  RA  + Q MK  GV P  
Sbjct: 391 ATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDT 450

Query: 494 STF----------------LLLAEARRATG--LTKEAKRILSKIKNKERTNEMEAE---- 531
            ++                L+L +  +A G  + K   RIL +  ++    E+EA+    
Sbjct: 451 LSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQLKHE 510

Query: 532 -EDIPVESLERLYHKEATT 549
            + +PVES  RL  ++A T
Sbjct: 511 SQFMPVES--RLTSQKAKT 527



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/261 (24%), Positives = 123/261 (47%), Gaps = 12/261 (4%)

Query: 235 VMHKMAASG--MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
           ++ +M A G  ++P+ +    + TAY +  ++  A ++  + E     P       +I  
Sbjct: 17  LLKEMVAEGRPLRPNTLV--KLITAYGRGNKSGDAFDLFNQAESFACSPTVHAFTKLIDI 74

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVN- 350
               G+ + A    + + + G   +   +N+LI+ F     R G +D  + + +E ++  
Sbjct: 75  LVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYF----GRSGQLDSAMEMFREMKIKG 130

Query: 351 --PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             PD  TY  ++NA   AG + + +  FD M + G+ P+   Y++L   + +  + + A 
Sbjct: 131 SEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMAL 190

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            L   M   GF P+VV +  ++   CS G +  A ++F KM   G SP+  T+ TL+ G 
Sbjct: 191 GLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGL 250

Query: 469 SEARQPWRAEEILQIMKAFGV 489
            ++ +   A ++ + M   GV
Sbjct: 251 GKSGRVEEAHKVFREMVDRGV 271



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/263 (21%), Positives = 111/263 (42%), Gaps = 4/263 (1%)

Query: 262 GEADQAEEVIVEMEHNG--VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           G  D  E ++ EM   G  ++PN  T   +I+ Y +  K  +A       + +   P + 
Sbjct: 9   GILDPLETLLKEMVAEGRPLRPN--TLVKLITAYGRGNKSGDAFDLFNQAESFACSPTVH 66

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            F  LI   V   + +  + V   + +     D   Y+ ++  +  +G +D   E+F +M
Sbjct: 67  AFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEMFREM 126

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G +PD + Y  L     +    ++A      M+E G  PN+  +  ++  +   G +
Sbjct: 127 KIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQL 186

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D A+ +F +M   G  P++ T+  L+     A +   A ++   M   G  P   T+  L
Sbjct: 187 DMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTL 246

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
                 +G  +EA ++  ++ ++
Sbjct: 247 VNGLGKSGRVEEAHKVFREMVDR 269


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 114/484 (23%), Positives = 229/484 (47%), Gaps = 41/484 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + TKL++ L +  + ++A  +   ++   H P   T T ++ +L +  R +    ++ ++
Sbjct: 41  TYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 100

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              GM  ++I ++A+++   +   ++EA+     M E G  PT  TYN++I G+  A + 
Sbjct: 101 LHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRV 160

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+   ++ M  EG   P++ TY  L+  +C  +++     ++ ++   G  PD+VTY+T
Sbjct: 161 DEAHGFMEQMVAEG-CHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYST 219

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G    A ++  EM      P   T   +I GYC+ G + EA+R    M +  
Sbjct: 220 VIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDK 276

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P++V +  L+  F ++   D   E+   M   +++PDV+T++++++     G M+   
Sbjct: 277 CAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDAL 336

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG- 432
           E+ +++ + G  P  + Y+ +  GY +  +  KAEEL+      GF PN V +  +++G 
Sbjct: 337 ELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGC 396

Query: 433 ------------------------------------WCSDGSMDRAIEVFDKMCEHGVSP 456
                                                C DG  D A++ +++M + G  P
Sbjct: 397 CRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVP 456

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
              TF T+++   +A QP +A E+L+ M  +G  P   T   +  A    G+ ++A  + 
Sbjct: 457 AAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELA 516

Query: 517 SKIK 520
           S+++
Sbjct: 517 SELR 520



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/416 (25%), Positives = 203/416 (48%), Gaps = 6/416 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L++ L +  +  EA A+   + E G  P++VTY +++      +R +  H  M Q+
Sbjct: 111 TYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQM 170

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  PD I + A+I  F +S ++   ++   ++   G TP   TY+T+I G   AG+ 
Sbjct: 171 VAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRL 230

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++V + + MS      P   TYN L+  +C   ++ EA  ++ KM      PDVVTY T
Sbjct: 231 RDAVDIFEEMS----CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTT 286

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           + +A+ + G  D A E+  +M  N + P+  T   ++ G C EG++++AL     +   G
Sbjct: 287 LMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRG 346

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P +  +N ++ G+ +       +E++A  +     P+ +TY+ ++     AG  D+  
Sbjct: 347 CPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQAL 406

Query: 374 EIFDDM-GKAGIKPDAHA-YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
           +  D +  + G  P + A Y+I+     R+   + A +    MI+ G+ P    F T++ 
Sbjct: 407 QYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVF 466

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
             C      +A E+ ++M ++G +P   T + ++  Y  A    +A+E+   ++ +
Sbjct: 467 ALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLY 522



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 203/430 (47%), Gaps = 21/430 (4%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           + +N++ GG    L     L  AL + ++ N  H            PD + +  +++  S
Sbjct: 6   LLHNVVIGG----LCRAGRLRHALGVYRQMNDAHP-----------PDFLTYTKLVHGLS 50

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           ++  + +A+    +M  +   P  +T   +++   +  + +++ +L++ M   G +  N 
Sbjct: 51  KARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRG-MAANA 109

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            TY+ LV   C  + + EA  ++  MA  G  P VVTYN+I T + +    D+A   + +
Sbjct: 110 ITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQ 169

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M   G  P+  T   +I G+CK   +   L     +   G  P++V ++ +I G  +   
Sbjct: 170 MVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGR 229

Query: 334 -RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
            RD VD    + +E    P  ITY++++  +  AG MD+   +   M      PD   Y+
Sbjct: 230 LRDAVD----IFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYT 285

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            L   + +    + A EL   M+ +   P+VV FT+++ G C +G M+ A+E+ +++   
Sbjct: 286 TLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 345

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G  P + T+  ++ GY +A Q  +AEE++   ++ G  P   T+ +L       G T +A
Sbjct: 346 GCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQA 405

Query: 513 KRILSKIKNK 522
            + L ++ ++
Sbjct: 406 LQYLDQLNSE 415



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 181/385 (47%), Gaps = 14/385 (3%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   ++       +  EA      ++  G  P ++TYT L+      +       ++
Sbjct: 143 TVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELL 202

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +V   G  PD + ++ VI+   ++G + +A+D F +M      PT  TYN+LI GY  A
Sbjct: 203 GEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMS---CAPTAITYNSLIGGYCRA 259

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +E+++LL  M  +    P++ TY  L+ A+C    + +A+ +  +M A+ + PDVVT
Sbjct: 260 GDMDEAIRLLGKMV-DDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVT 318

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           + ++       G  + A E++ E+   G  P   T   ++ GYCK  ++++A       +
Sbjct: 319 FTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFR 378

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR-----VNPDVITYSTIMNAWS 364
             G  PN V +N+L+ G      R G  D+ L  + +           V  Y+ I++A  
Sbjct: 379 SRGFVPNTVTYNILVAGCC----RAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALC 434

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G  D   + +++M + G  P A  ++ +     +  +P++A ELL  MI+ G  P   
Sbjct: 435 RDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPG 494

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKM 449
               ++S +C  G + +A E+  ++
Sbjct: 495 TCDAVVSAYCRAGMIQKADELASEL 519



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 61/242 (25%), Positives = 119/242 (49%), Gaps = 1/242 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T LM++  + G+  +A  +F  ++     P +VT+T+L+  L  + R      ++ 
Sbjct: 281 VVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 340

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  P    +N V++ + ++  + +A +     +  G  P T TYN L+ G   AG
Sbjct: 341 EITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAG 400

Query: 192 KPEESVKLLDLMSREGNVKP-NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           + +++++ LD ++ EG   P ++  Y +++ A C +    +A     +M   G  P   T
Sbjct: 401 RTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAAT 460

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           + T+  A  +  +  QA E++ EM   G  P   TC  ++S YC+ G I++A   A  ++
Sbjct: 461 FATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 520

Query: 311 EY 312
            Y
Sbjct: 521 LY 522



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 146/349 (41%), Gaps = 39/349 (11%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           + P    +NV++   C    +  A  V  +M      PD +TY  +    ++      A 
Sbjct: 1   MNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKARRLRDAV 59

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           +V+ EM      P+  T  +++   C   ++ +A      M   G+  N + ++ L+ G 
Sbjct: 60  QVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGL 119

Query: 329 VEIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            +    + +DE +AL   M E    P V+TY++I+  +  A  +D+     + M   G  
Sbjct: 120 CKC---ERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCH 176

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS-------------- 431
           PD   Y+ L  G+ + ++  +  ELL  +   GF P++V ++T+I               
Sbjct: 177 PDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDI 236

Query: 432 ------------------GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
                             G+C  G MD AI +  KM +   +P++ T+ TLM  + +  +
Sbjct: 237 FEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGR 296

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              A E+ Q M A  + P   TF  L +     G  ++A  +L +I  +
Sbjct: 297 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 345


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 119/397 (29%), Positives = 209/397 (52%), Gaps = 14/397 (3%)

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + ++G  P+ I +NA+++     G M +A   + +M ++G +P   TYNTL+ G+   G+
Sbjct: 1   MRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGE 60

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +E++K+ D   + G V P++ TYN L+  +C    + EA  ++ +M +  + PDVVTYN
Sbjct: 61  LDEALKIFDGAVKRGFV-PDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYN 119

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK-IKEALRFARTMKE 311
           ++     +NG  D+A  +IV+    G  PN  T   +ISG C+E + + EAL+   ++ +
Sbjct: 120 SLVNGLCKNGRVDEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLK 176

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGF 368
            G  P +  +N+LI G   ++  D V+E   L   + +  + PD ITY+  ++    AG 
Sbjct: 177 QGYEPEVPTYNILIDG---LLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGR 233

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           ++    +  DM + G  PD  +++ +  G  +E+  ++AE LL  M   G  PN + F T
Sbjct: 234 VEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNT 293

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF- 487
           +I G C  G   +A+  F +M + GV P + T+  L+ G  +ARQ  R +E + +  A  
Sbjct: 294 LICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMI 353

Query: 488 --GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             G  P   T+  L +     G   +A+R+L  ++ K
Sbjct: 354 EKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAK 390



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/423 (27%), Positives = 207/423 (48%), Gaps = 8/423 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L   G+  +AQA++  +I+ G+ P +VTY TLL         +    I     + G
Sbjct: 16  LLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGAVKRG 75

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + +NA+IN F ++  ++EA     +M    L P   TYN+L+ G    G+ +E+ 
Sbjct: 76  FVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEAR 135

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNE-KNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            L+     +    PN+ TY+ L+   C E + ++EA  +   +   G +P+V TYN +  
Sbjct: 136 MLI----VDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILID 191

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              +    ++A E+   +  +G++P+  T  + I G CK G++++AL   + M E G  P
Sbjct: 192 GLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVP 251

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++V  N +I G  +    D  + +L+ M+    +P+ I+++T++     AG   K    F
Sbjct: 252 DVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTF 311

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE---LLMTMIESGFHPNVVIFTTIISGW 433
            +M K G+KP    Y+IL  G  + ++  + +E   L   MIE G  P+VV ++ +I G 
Sbjct: 312 KEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGL 371

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G +D A  +   M   G  PN+ T+ +L+ G     +   A E+   M   G  P  
Sbjct: 372 GKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDT 431

Query: 494 STF 496
            T+
Sbjct: 432 ITY 434



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 178/365 (48%), Gaps = 10/365 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N   +  K  EAQ I   ++     P +VTY +L+  L    R +    +  
Sbjct: 80  VVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRVDEARML-- 137

Query: 132 QVEENGMDPDSIFFNAVINAFS-ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            + + G  P+ I ++ +I+    E   + EA+  F  + + G  P   TYN LI G    
Sbjct: 138 -IVDKGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNILIDGLLKE 196

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +  E+ +L   + + G ++P+  TY V +   C    + +A  ++  M   G  PDVV+
Sbjct: 197 DRVNEAFELFSGLVKHG-LEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVS 255

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +N +     +    D+AE ++  ME  G  PN  +   +I G C+ GK K+A+   + M 
Sbjct: 256 HNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEML 315

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL----ALMKEFRVNPDVITYSTIMNAWSTA 366
           + GV P +V +N+L+ G  +      + E +    A++++ RV PDV+TYS +++    A
Sbjct: 316 KRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRV-PDVVTYSALIDGLGKA 374

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G +D  + +   M   G  P+ + Y+ L  G    ++ ++A EL + M+E G  P+ + +
Sbjct: 375 GKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITY 434

Query: 427 TTIIS 431
            TIIS
Sbjct: 435 GTIIS 439



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/330 (28%), Positives = 158/330 (47%), Gaps = 43/330 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR-FNSIHSIM 130
           V +   L+N L + G+  EA+ +   +++ G  P+++TY+TL++ L  + R  +    + 
Sbjct: 115 VVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRGVSEALKLF 171

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             V + G +P+   +N +I+   +   + EA + F  + + GL P   TY   I G   A
Sbjct: 172 GSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKA 231

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ E+++ +L  M  +G V P++ ++N ++   C EK + EA  ++  M A G  P+ ++
Sbjct: 232 GRVEDALLMLKDMDEKGCV-PDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAIS 290

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK---EGKIKEALRFAR 307
           +NT+     + G+  +A     EM   GV+P   T  I++ G CK   EG+IKEA+    
Sbjct: 291 FNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFD 350

Query: 308 TMKEYGVHPNLVIFNLLIKGF------------VEIMDRDG------------------- 336
            M E G  P++V ++ LI G             +  M+  G                   
Sbjct: 351 AMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLE 410

Query: 337 -VDEVLAL---MKEFRVNPDVITYSTIMNA 362
            VDE L L   M E    PD ITY TI++A
Sbjct: 411 KVDEALELFVAMVEKGCVPDTITYGTIISA 440



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 101/198 (51%), Gaps = 5/198 (2%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+++ C   V S   ++N L +  +  EA+ + + +   G  P+ +++ TL+       +
Sbjct: 244 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 303

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSES---GNMEEAMDTFWKMKESGLTPTTST 179
           +    +   ++ + G+ P  + +N +++   ++   G ++EA+  F  M E G  P   T
Sbjct: 304 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 363

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           Y+ LI G G AGK +++ +LL  M  +G + PN+ TYN L+   C  + + EA  +   M
Sbjct: 364 YSALIDGLGKAGKLDDARRLLGAMEAKGCI-PNVYTYNSLISGLCGLEKVDEALELFVAM 422

Query: 240 AASGMKPDVVTYNTIATA 257
              G  PD +TY TI +A
Sbjct: 423 VEKGCVPDTITYGTIISA 440


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 224/461 (48%), Gaps = 6/461 (1%)

Query: 67  ESCRTVRSMTK---LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           E C  + S++    L+ SL+  G+  + +A F  L+  G +P    +  ++ A       
Sbjct: 114 EVCSPLPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDL 173

Query: 124 NSIHSIMSQV--EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
           +   +++ ++   E    PD+  +N VI     SG   +A+  F +M + G+ P   TYN
Sbjct: 174 DVALAMVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYN 233

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           T+I G+   G  E   +L D M  +G  KPN+ TYNVL+   C    + E   +M +MA+
Sbjct: 234 TMIDGHVKGGDLEAGFRLRDQMLHDGP-KPNIVTYNVLLSGLCRAGRMDETRVLMDEMAS 292

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
             M PD  TY+ +     + GE+     +  E    GV     TC I+++G CK+GK+ +
Sbjct: 293 HSMFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAK 352

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A +    +   G+ P  VI+N LI G+ ++ D  G   +   MK   + PD ITY+ ++N
Sbjct: 353 AEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALIN 412

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                  + K +++  +M K+G+ P    ++ L   Y    + EK   +L  M + G   
Sbjct: 413 GLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKS 472

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +V+ F +++  +C +G +  A+ + D M    V+PN + + +++  Y E+    +A  ++
Sbjct: 473 DVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLV 532

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           + MK  GV     T+ LL +    +    EA+ ++  ++N+
Sbjct: 533 EKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQ 573



 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 220/428 (51%), Gaps = 7/428 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++  ++ G  +    + + ++  G KP++VTY  LL+ L    R +    +M ++  + 
Sbjct: 235 MIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHS 294

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M PD   ++ + +  + +G     +  F +  + G+     T + L+ G    GK  ++ 
Sbjct: 295 MFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAE 354

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L+++   G V P    YN L+  +C  +++  A+ +  +M +  ++PD +TYN +   
Sbjct: 355 QVLEMLVHTGLV-PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING 413

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +     +AE++++EME +GV P+  T   +I  Y   G++++       M++ G+  +
Sbjct: 414 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 473

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKE 374
           ++ F  ++K F +      + E +A++ +     V P+   Y++I++A+  +G  ++   
Sbjct: 474 VISFGSVVKAFCK---NGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFL 530

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + + M  +G+      Y++L KG  R  + ++AEEL+ T+   G  P+VV + TIIS  C
Sbjct: 531 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 590

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
           + G  D+A+E+  +M ++G+ P L+T+ TL+   + A +    E + Q M    V P  S
Sbjct: 591 NKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSS 650

Query: 495 TFLLLAEA 502
            + ++ +A
Sbjct: 651 IYGIMVDA 658



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 176/381 (46%), Gaps = 7/381 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L + L   G+ +   ++F   ++ G      T + LL  L    +      ++  +   G
Sbjct: 305 LFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTG 364

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P ++ +N +IN + +  ++  A   F +MK   + P   TYN LI G     K E   
Sbjct: 365 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLC---KLEMVT 421

Query: 198 KLLDL---MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           K  DL   M + G V P++ T+N L+ A+     + + + V+  M   G+K DV+++ ++
Sbjct: 422 KAEDLVMEMEKSG-VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSV 480

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             A+ +NG+  +A  ++ +M +  V PN +    II  Y + G  ++A      MK  GV
Sbjct: 481 VKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGV 540

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
             ++V +NLL+KG       D  +E++  ++   + PDV++Y+TI++A    G  DK  E
Sbjct: 541 SASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALE 600

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +  +M K GI+P    Y  L             E L   M+     P+  I+  ++  + 
Sbjct: 601 LLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 660

Query: 435 SDGSMDRAIEVFDKMCEHGVS 455
              +  +   +  +M E G++
Sbjct: 661 RCENDSKVASLKKEMSEKGIA 681



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 169/390 (43%), Gaps = 46/390 (11%)

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P+ S+ N L++     G+  +      L+   G  +P+   +N +V+A     ++  A  
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAG-ARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 235 VMHKMAAS--GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
           ++ +M  S     PD  +YN +     ++G+   A +V  EM   GV PN  T   +I G
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVN- 350
           + K G ++   R    M   G  PN+V +N+L+ G      R G +DE   LM E   + 
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLC----RAGRMDETRVLMDEMASHS 294

Query: 351 --PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             PD  TYS + +  +  G       +F +  K G+   A+  SIL  G  ++ +  KAE
Sbjct: 295 MFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAE 354

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM------------------- 449
           ++L  ++ +G  P  VI+ T+I+G+C    +  A  +F++M                   
Sbjct: 355 QVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGL 414

Query: 450 CE----------------HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C+                 GV P+++TF TL+  Y  A Q  +   +L  M+  G+    
Sbjct: 415 CKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDV 474

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNKE 523
            +F  + +A    G   EA  IL  +  K+
Sbjct: 475 ISFGSVVKAFCKNGKIPEAVAILDDMIYKD 504



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 132/244 (54%), Gaps = 1/244 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   L+++    G+ ++   + +++ + G K  ++++ +++ A     +     +I+
Sbjct: 438 SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAIL 497

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +    + P++  +N++I+A+ ESG+ E+A     KMK SG++ +  TYN L+KG   +
Sbjct: 498 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRS 557

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + +E+ +L+  +  +G ++P++ +YN ++ A CN+ +  +A  ++ +M   G++P + T
Sbjct: 558 SQIDEAEELIYTLRNQG-LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 616

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+T+ +A A  G     E +  +M H  V+P+    GI++  Y +     +     + M 
Sbjct: 617 YHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMS 676

Query: 311 EYGV 314
           E G+
Sbjct: 677 EKGI 680



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 87/170 (51%), Gaps = 1/170 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++ IE G  ++A  +   +   G   S+VTY  LL  L    + +    ++  +   G
Sbjct: 515 IIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG 574

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +N +I+A    G+ ++A++   +M + G+ PT  TY+TL+     AG+  +  
Sbjct: 575 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDME 634

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
            L   M  + NV+P+   Y ++V A+   +N ++  ++  +M+  G+  D
Sbjct: 635 CLYQQMLHK-NVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 683


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 211/389 (54%), Gaps = 3/389 (0%)

Query: 136 NGMDPDSIFFNAVINAFSES-GNME-EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +G  P  + +N+V++A   S G+++  A + + +M  S ++P   TYN LI+G+   G+ 
Sbjct: 171 SGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGEL 230

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++ +     M R G + PN+ TYN L+ A+C    I EA+ ++  M++ GM+P++++YN 
Sbjct: 231 QKGLGCFGEMERNGCL-PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNV 289

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           I     + G   +A E++ EM + G  P+  T   +++GYCKEG   +AL     M   G
Sbjct: 290 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 349

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V P++V +  LI    +  + +   E    M+   + P+  TY+T+++ +S  G +++  
Sbjct: 350 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 409

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            I ++M ++G  P    Y+    G+   +  E+A  ++  M+E G  P+VV ++TIISG+
Sbjct: 410 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 469

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G +DRA ++  +M E GVSP+  T+ +L+ G  E R+   A ++ Q M   G+ P +
Sbjct: 470 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 529

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK 522
            T+  L  A    G   +A  +  ++ +K
Sbjct: 530 FTYTTLINAYCVEGDLNKALHLHDEMIHK 558



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/509 (25%), Positives = 236/509 (46%), Gaps = 22/509 (4%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C   V +   L+++  + G+  EA  +  ++   G +P+L++Y  ++  L  +  
Sbjct: 240 MERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGS 299

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 I+ ++   G  PD + +N ++N + + GN  +A+    +M  +G++P+  TY  
Sbjct: 300 MKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTA 359

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI     A     +++  D M   G ++PN RTY  L+  +  +  + EA+ ++++M  S
Sbjct: 360 LINSMCKARNLNRAMEFFDQMRIRG-LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTES 418

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P VVTYN     +      ++A  V+ EM   G+ P+  +   IISG+C++G++  A
Sbjct: 419 GFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRA 478

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
            +  + M E GV P+ V ++ LI+G  E+       ++   M +  + PD  TY+T++NA
Sbjct: 479 FQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINA 538

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +   G ++K   + D+M   G  PDA  YS+L  G  ++    +A+ LL  +I     P+
Sbjct: 539 YCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPS 598

Query: 423 VVIFTT---------------IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            V + T               +I G+C  G M  A  VF+ M E    P    +  ++ G
Sbjct: 599 DVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHG 658

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNE 527
           +       +A  + + M   G  P   T + L +A    G+ +E   ++       R NE
Sbjct: 659 HCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRSCRLNE 718

Query: 528 MEAEEDIPVESLERLYHKEATTASYPNLL 556
            E       + L  + HKE    +  N+L
Sbjct: 719 AEL-----AKVLVEINHKEGNMEAVLNVL 742



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 216/421 (51%), Gaps = 46/421 (10%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFN---SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNM 158
           G  P +++Y ++L A+ ++ R +   S   +  ++  + + P+   +N +I  F   G +
Sbjct: 172 GFMPGVLSYNSVLDAI-VRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGEL 230

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
           ++ +  F +M+ +G  P   TYNTLI  Y   G+ +E+  LL  MS +G ++PNL +YNV
Sbjct: 231 QKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKG-MQPNLISYNV 289

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           ++   C E ++ EAW ++ +M   G  PD VTYNT+   Y + G   QA  +  EM  NG
Sbjct: 290 IINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNG 349

Query: 279 V-----------------------------------QPNGRTCGIIISGYCKEGKIKEAL 303
           V                                   +PN RT   +I G+ ++G + EA 
Sbjct: 350 VSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAY 409

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIM 360
           R    M E G  P++V +N  I G   +++R  ++E L +++E     + PDV++YSTI+
Sbjct: 410 RILNEMTESGFSPSVVTYNAFIHGHC-VLER--MEEALGVVQEMVEKGLAPDVVSYSTII 466

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           + +   G +D+  ++  +M + G+ PDA  YS L +G    +   +A +L   M++ G  
Sbjct: 467 SGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLP 526

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+   +TT+I+ +C +G +++A+ + D+M   G  P+  T+  L+ G ++  +   A+ +
Sbjct: 527 PDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRL 586

Query: 481 L 481
           L
Sbjct: 587 L 587



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 195/470 (41%), Gaps = 88/470 (18%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++N L   G  +EA  I   +   G  P  VTY TLL     +  F+    I +++
Sbjct: 286 SYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEM 345

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             NG+ P  + + A+IN+  ++ N+  AM+ F +M+  GL P   TY TLI G+   G  
Sbjct: 346 VRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLL 405

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+ ++L+ M+  G   P++ TYN  +   C  + + EA  V+ +M   G+ PDVV+Y+T
Sbjct: 406 NEAYRILNEMTESG-FSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYST 464

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG--------------------- 292
           I + + + GE D+A ++  EM   GV P+  T   +I G                     
Sbjct: 465 IISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMG 524

Query: 293 --------------YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF-VEIMDRDGV 337
                         YC EG + +AL     M   G  P+ V +++LI G   +   R+  
Sbjct: 525 LPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAK 584

Query: 338 DEVLALMKEFRVNPDVITYSTIM---------------NAWSTAGFMDKCKEIFDDMGKA 382
             +  L+ E  V  DV TY T++                 +   G M +   +F+ M + 
Sbjct: 585 RLLFKLIYEESVPSDV-TYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVER 643

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW--------- 433
             KP    Y+++  G+ R     KA  L   MI SGF P+ V   T+I            
Sbjct: 644 NHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEM 703

Query: 434 ----------C----------------SDGSMDRAIEVFDKMCEHGVSPN 457
                     C                 +G+M+  + V   M + G+ PN
Sbjct: 704 SEVIGDTLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPN 753



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/287 (31%), Positives = 154/287 (53%), Gaps = 8/287 (2%)

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ--AEEVIV 272
            ++++V+++ +   I +A N ++   +SG  P V++YN++  A  ++  + +  AEEV  
Sbjct: 144 VFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYR 203

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           EM  + V PN  T  I+I G+C  G++++ L     M+  G  PN+V +N LI  + + M
Sbjct: 204 EMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCK-M 262

Query: 333 DRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
            R  +DE   L+K      + P++I+Y+ I+N     G M +  EI ++MG  G  PD  
Sbjct: 263 GR--IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEV 320

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+ L  GY +E    +A  +   M+ +G  P+VV +T +I+  C   +++RA+E FD+M
Sbjct: 321 TYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQM 380

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
              G+ PN +T+ TL+ G+S       A  IL  M   G  P   T+
Sbjct: 381 RIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTY 427


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 220/445 (49%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L+E  K +  ++++N +   G +P +VT  TL+ AL    +  +   ++ ++  +G
Sbjct: 168 LLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHG 227

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   F  ++  F E G++E A+    KM E+G +PT  T N LI GY   G+ E+++
Sbjct: 228 VAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDAL 287

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             +     +G  +P+  TYN  V   C   +++ A  VM  M   G  PDV TYNT+   
Sbjct: 288 GYIQQEIADG-FEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINC 346

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            ++NGE D+A+ ++ +M   G  P+  T   +I     + +++EAL  AR +   G+ P+
Sbjct: 347 LSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPD 406

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  FN+LI    ++ D      +   MK     PD +TY+ +++   + G +    ++ +
Sbjct: 407 VYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLN 466

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G       Y+ +     ++   E+AEE+   M   G   + V F T+I G C   
Sbjct: 467 EMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAK 526

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D A E+ ++M + G+ PN  T+ +++  Y +     +A +IL+ M A G      T+ 
Sbjct: 527 RIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYG 586

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L       G T+ A ++L  ++ K
Sbjct: 587 TLINGLCKAGRTQVALKLLRGMRIK 611



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 208/450 (46%), Gaps = 2/450 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T LM   IE G  + A  +   ++E G  P+ VT   L+       R       + Q 
Sbjct: 234 TFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQE 293

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G +PD + +N  ++   ++G++  A+     M + G  P   TYNT+I      G+ 
Sbjct: 294 IADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGEL 353

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+  +++ M   G + P+  T+N L+ A  ++  + EA ++  ++   G+ PDV T+N 
Sbjct: 354 DEAKGIVNQMVDRGCL-PDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNI 412

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A  + G+      +  EM+ +G  P+  T  I+I   C  GK+  AL     M+  G
Sbjct: 413 LINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNG 472

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              + V +N +I    + M  +  +EV   M    ++   +T++T+++    A  +D   
Sbjct: 473 CPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKRIDDAT 532

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+ + M K G++P+   Y+ +   Y ++   +KA ++L TM  +GF  +VV + T+I+G 
Sbjct: 533 ELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGTLINGL 592

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G    A+++   M   G+ P  K +  ++           A  + + M   G  P  
Sbjct: 593 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEVGEPPDA 652

Query: 494 STF-LLLAEARRATGLTKEAKRILSKIKNK 522
            T+ ++     R  G  KEA   L ++ NK
Sbjct: 653 LTYKIVFRSLCRGGGPIKEAFDFLVEMVNK 682



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 197/417 (47%), Gaps = 10/417 (2%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFN-SIHSIMSQVEEN--GMDPDSIFFNAVINAFSESGNM 158
           GH+   V   + + +    +RF+ ++  +++Q++ +  G+  D++ FN ++N   E   +
Sbjct: 119 GHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKL 178

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
           +     + +M   G+ P   T NTLIK    A +   +V +L+ MS  G V P+  T+  
Sbjct: 179 KLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHG-VAPDETTFTT 237

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L++ +  E +I  A  V  KM  +G  P  VT N +   Y + G  + A   I +   +G
Sbjct: 238 LMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADG 297

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
            +P+  T    + G C+ G +  AL+    M + G  P++  +N +I    +  + D   
Sbjct: 298 FEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAK 357

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            ++  M +    PD  T++T++ A S+   +++  ++  ++   G+ PD + ++IL    
Sbjct: 358 GIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNILINAL 417

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +  +P     L   M  SG  P+ V +  +I   CS G +  A+++ ++M  +G   + 
Sbjct: 418 CKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNALDLLNEMESNGCPRST 477

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
            T+ T++    +  +   AEE+   M A G+     TF  L +     GL K AKRI
Sbjct: 478 VTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLID-----GLCK-AKRI 528



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/382 (21%), Positives = 168/382 (43%), Gaps = 9/382 (2%)

Query: 146 NAVINAFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           + ++ A  E  + E A+      +      P+++ Y  +++  G AG  +    L+  M 
Sbjct: 57  DRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMR 116

Query: 205 REGNVKPNLRTYNV--LVRAWCNEKNITEAWN-VMHKMAAS--GMKPDVVTYNTIATAYA 259
           REG+    +R   V   V ++   +   +A + V++++     G++ D V +N +     
Sbjct: 117 REGH---QVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLV 173

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +  +    E V  EM   G+QP+  T   +I   C+  +++ A+     M  +GV P+  
Sbjct: 174 EGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDET 233

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            F  L++GF+E    +    V A M E   +P  +T + ++N +   G ++         
Sbjct: 234 TFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQE 293

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G +PD   Y+    G  +      A +++  M++ G  P+V  + T+I+    +G +
Sbjct: 294 IADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGEL 353

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D A  + ++M + G  P+  TF TL+   S   +   A ++ + +   G+ P   TF +L
Sbjct: 354 DEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVKGLSPDVYTFNIL 413

Query: 500 AEARRATGLTKEAKRILSKIKN 521
             A    G      R+  ++K+
Sbjct: 414 INALCKVGDPHLGIRLFEEMKS 435



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/236 (25%), Positives = 122/236 (51%), Gaps = 3/236 (1%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M    C R+  +   ++++L ++ + +EA+ +F+ +   G   S VT+ TL+  L   KR
Sbjct: 468 MESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDGLCKAKR 527

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    ++ Q+ + G+ P++I +N+++  + + GN+++A D    M  +G      TY T
Sbjct: 528 IDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEIDVVTYGT 587

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G   AG+ + ++KLL  M  +G ++P  + YN ++++     N+ +A N+  +M   
Sbjct: 588 LINGLCKAGRTQVALKLLRGMRIKG-IRPTPKAYNPVIQSLFRRNNLRDALNLFREMTEV 646

Query: 243 GMKPDVVTYNTIATAYAQ-NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           G  PD +TY  +  +  +  G   +A + +VEM + G  P   +  ++  G    G
Sbjct: 647 GEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLG 702



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/327 (22%), Positives = 136/327 (41%), Gaps = 9/327 (2%)

Query: 205 REGNVKPNLRTYNV-----LVRAWCNEKNITEAWNVMHK-MAASGMKPDVVTYNTIATAY 258
           R G+    LR Y +     L+ A   + +   A  +++  +A     P    Y  I    
Sbjct: 40  RRGHRPAPLRVYAISDQDRLLAALREQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKL 99

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE---YGVH 315
              G  D  E ++ EM   G Q         +  Y +  +  +A+       +   +GV 
Sbjct: 100 GTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQ 159

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            + V+FN L+   VE      ++ V   M    + PDV+T +T++ A   A  +     +
Sbjct: 160 ADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLM 219

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            ++M   G+ PD   ++ L +G++ E   E A  +   M+E+G  P  V    +I+G+C 
Sbjct: 220 LEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCK 279

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G ++ A+    +    G  P+  T+ T + G  +      A +++ +M   G  P   T
Sbjct: 280 MGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFT 339

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNK 522
           +  +       G   EAK I++++ ++
Sbjct: 340 YNTVINCLSKNGELDEAKGIVNQMVDR 366


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 213/434 (49%), Gaps = 2/434 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +  K++++L +RG   EA  +   +I+ G   +L TY   +  L    R      ++  +
Sbjct: 189 AFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 248

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
               + PD + +N +I    +    +EAM    +M   G  P   TYNT+I GY      
Sbjct: 249 RAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMV 307

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+ +LL     +G V P+  TY  L+   C E ++  A  + ++  A G+KPD+V YN+
Sbjct: 308 QEATELLKDAVFKGFV-PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 366

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +       G    A +V+ EM   G  P+ +T  I+I+G CK G I +A          G
Sbjct: 367 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 426

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P++  FN LI G+ + +  D   +++  M E+ + PD ITY++++N    AG +++  
Sbjct: 427 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 486

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E F +M   G  P+   Y+IL + + R  + E+A ++++ M + G HP+ V F T+I G+
Sbjct: 487 ETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGF 546

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C +G ++ A  +F K+ E G S    TF TL+  +S       AE+I   M + G     
Sbjct: 547 CRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADS 606

Query: 494 STFLLLAEARRATG 507
            T+ +L +    T 
Sbjct: 607 YTYRVLIDGSCKTA 620



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 208/432 (48%), Gaps = 1/432 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+  L ++  PQEA      ++  G  P   TY T++              ++ 
Sbjct: 256 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK 315

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
                G  PD + + ++IN     G++E A++ F + +  G+ P    YN+L+KG  + G
Sbjct: 316 DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQG 375

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++++++ M+ EG   P+++TYN+++   C   NI++A  VM+     G  PDV T+
Sbjct: 376 LILHALQVMNEMAEEG-CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF 434

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   Y +  + D A +++  M   G+ P+  T   +++G CK GK+ E     + M  
Sbjct: 435 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 494

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G HPN + +N+LI+ F      +   +V+  M +  ++PD ++++T++  +   G ++ 
Sbjct: 495 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 554

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F  + + G    A  ++ L   +  +     AE++   M+  G   +   +  +I 
Sbjct: 555 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 614

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C   ++DRA     +M + G  P++ TF  ++   +   + ++A  I+ IM   GV P
Sbjct: 615 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674

Query: 492 QKSTFLLLAEAR 503
           +    +L A+ +
Sbjct: 675 EVVDTILNADKK 686



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 206/451 (45%), Gaps = 6/451 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T  + S     +P  A  +   L   G     V Y T++  L      +    +  
Sbjct: 121 LHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFD 176

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+    + P+   FN V++A  + G++ EA     K+ + G++    TYN  I+G   AG
Sbjct: 177 QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 236

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+V+L+D M       P++ TYN L+R  C +    EA + + +M   G  PD  TY
Sbjct: 237 RLPEAVRLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTY 294

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NTI   Y +     +A E++ +    G  P+  T   +I+G C EG ++ AL      + 
Sbjct: 295 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQA 354

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P++V++N L+KG           +V+  M E   +PD+ TY+ ++N     G +  
Sbjct: 355 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 414

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + +D    G  PD   ++ L  GY +  + + A +L+  M E G  P+ + + ++++
Sbjct: 415 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 474

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G ++   E F +M   G  PN  T+  L+  +  + +   A +++  M   G+HP
Sbjct: 475 GLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHP 534

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              +F  L       G  + A  +  K++ K
Sbjct: 535 DAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 565



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 208/448 (46%), Gaps = 12/448 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M++L++     +A  ++  ++  G  P L T+T  L +  +  R +    ++  +   G
Sbjct: 92  IMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG 151

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
               ++ +  V+      G+  +A   F +M  + + P  + +N ++      G   E+ 
Sbjct: 152 ----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAG 207

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  + + G +  NL TYN+ +R  C    + EA  ++  M A  + PDVVTYNT+   
Sbjct: 208 LLLGKVIQRG-MSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRG 265

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +     +A   +  M + G  P+  T   II GYCK   ++EA    +     G  P+
Sbjct: 266 LCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 325

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
            V +  LI G     D   V+  L L  E +   + PD++ Y++++      G +    +
Sbjct: 326 QVTYCSLINGLCAEGD---VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 382

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + ++M + G  PD   Y+I+  G  +      A  ++   I  G+ P+V  F T+I G+C
Sbjct: 383 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 442

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
               +D A+++ ++M E+G++P+  T+ +++ G  +A +     E  Q M   G HP   
Sbjct: 443 KRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPI 502

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
           T+ +L E    +   +EA +++ K+  +
Sbjct: 503 TYNILIENFCRSNKMEEASKVIVKMSQE 530



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 165/361 (45%), Gaps = 8/361 (2%)

Query: 138 MDPDSI--FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           + P +I   + A I A++ +G + +A+D F +M      P    YN ++     A   ++
Sbjct: 45  LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 104

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + K+   M   G V P+L T+ + +R++C       A  ++  +   G     V Y T+ 
Sbjct: 105 AHKVYVRMLAAG-VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVV 159

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
                +G    A ++  +M H  V PN      ++   CK G + EA      + + G+ 
Sbjct: 160 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 219

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            NL  +N+ I+G  E         ++  M+ + V PDV+TY+T++          +    
Sbjct: 220 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHY 278

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
              M   G  PD   Y+ +  GY +    ++A ELL   +  GF P+ V + ++I+G C+
Sbjct: 279 LRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCA 338

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G ++RA+E+F++    G+ P++  + +L+ G         A +++  M   G HP   T
Sbjct: 339 EGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQT 398

Query: 496 F 496
           +
Sbjct: 399 Y 399



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 149/300 (49%), Gaps = 4/300 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +E C   +++   ++N L + G   +A  + N+ I  G+ P + T+ TL+     + +
Sbjct: 387 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 446

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +S   ++ ++ E G+ PD+I +N+V+N   ++G + E  +TF +M   G  P   TYN 
Sbjct: 447 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 506

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI+ +  + K EE+ K++  MS+EG + P+  ++N L+  +C   ++  A+ +  K+   
Sbjct: 507 LIENFCRSNKMEEASKVIVKMSQEG-LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 565

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G      T+NT+  A++       AE++  EM   G + +  T  ++I G CK   +  A
Sbjct: 566 GYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA 625

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M + G  P++  F  +I              ++ +M +  V P+V+   TI+NA
Sbjct: 626 YMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNA 683


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 213/434 (49%), Gaps = 2/434 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +  K++++L +RG   EA  +   +I+ G   +L TY   +  L    R      ++  +
Sbjct: 188 AFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 247

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
               + PD + +N +I    +    +EAM    +M   G  P   TYNT+I GY      
Sbjct: 248 RAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMV 306

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+ +LL     +G V P+  TY  L+   C E ++  A  + ++  A G+KPD+V YN+
Sbjct: 307 QEATELLKDAVFKGFV-PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 365

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +       G    A +V+ EM   G  P+ +T  I+I+G CK G I +A          G
Sbjct: 366 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 425

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P++  FN LI G+ + +  D   +++  M E+ + PD ITY++++N    AG +++  
Sbjct: 426 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 485

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E F +M   G  P+   Y+IL + + R  + E+A ++++ M + G HP+ V F T+I G+
Sbjct: 486 ETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGF 545

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C +G ++ A  +F K+ E G S    TF TL+  +S       AE+I   M + G     
Sbjct: 546 CRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADS 605

Query: 494 STFLLLAEARRATG 507
            T+ +L +    T 
Sbjct: 606 YTYRVLIDGSCKTA 619



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 208/432 (48%), Gaps = 1/432 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+  L ++  PQEA      ++  G  P   TY T++              ++ 
Sbjct: 255 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK 314

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
                G  PD + + ++IN     G++E A++ F + +  G+ P    YN+L+KG  + G
Sbjct: 315 DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQG 374

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++++++ M+ EG   P+++TYN+++   C   NI++A  VM+     G  PDV T+
Sbjct: 375 LILHALQVMNEMAEEG-CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF 433

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   Y +  + D A +++  M   G+ P+  T   +++G CK GK+ E     + M  
Sbjct: 434 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 493

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G HPN + +N+LI+ F      +   +V+  M +  ++PD ++++T++  +   G ++ 
Sbjct: 494 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 553

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F  + + G    A  ++ L   +  +     AE++   M+  G   +   +  +I 
Sbjct: 554 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 613

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C   ++DRA     +M + G  P++ TF  ++   +   + ++A  I+ IM   GV P
Sbjct: 614 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 673

Query: 492 QKSTFLLLAEAR 503
           +    +L A+ +
Sbjct: 674 EVVDTILNADKK 685



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 206/451 (45%), Gaps = 6/451 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T  + S     +P  A  +   L   G     V Y T++  L      +    +  
Sbjct: 120 LHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFD 175

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+    + P+   FN V++A  + G++ EA     K+ + G++    TYN  I+G   AG
Sbjct: 176 QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 235

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+V+L+D M       P++ TYN L+R  C +    EA + + +M   G  PD  TY
Sbjct: 236 RLPEAVRLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTY 293

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NTI   Y +     +A E++ +    G  P+  T   +I+G C EG ++ AL      + 
Sbjct: 294 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQA 353

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P++V++N L+KG           +V+  M E   +PD+ TY+ ++N     G +  
Sbjct: 354 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 413

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + +D    G  PD   ++ L  GY +  + + A +L+  M E G  P+ + + ++++
Sbjct: 414 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 473

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G ++   E F +M   G  PN  T+  L+  +  + +   A +++  M   G+HP
Sbjct: 474 GLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHP 533

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              +F  L       G  + A  +  K++ K
Sbjct: 534 DAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 564



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/448 (24%), Positives = 208/448 (46%), Gaps = 12/448 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M++L++     +A  ++  ++  G  P L T+T  L +  +  R +    ++  +   G
Sbjct: 91  IMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG 150

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
               ++ +  V+      G+  +A   F +M  + + P  + +N ++      G   E+ 
Sbjct: 151 ----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAG 206

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  + + G +  NL TYN+ +R  C    + EA  ++  M A  + PDVVTYNT+   
Sbjct: 207 LLLGKVIQRG-MSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRG 264

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +     +A   +  M + G  P+  T   II GYCK   ++EA    +     G  P+
Sbjct: 265 LCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 324

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
            V +  LI G     D   V+  L L  E +   + PD++ Y++++      G +    +
Sbjct: 325 QVTYCSLINGLCAEGD---VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 381

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + ++M + G  PD   Y+I+  G  +      A  ++   I  G+ P+V  F T+I G+C
Sbjct: 382 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 441

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
               +D A+++ ++M E+G++P+  T+ +++ G  +A +     E  Q M   G HP   
Sbjct: 442 KRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPI 501

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
           T+ +L E    +   +EA +++ K+  +
Sbjct: 502 TYNILIENFCRSNKMEEASKVIVKMSQE 529



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 161/353 (45%), Gaps = 6/353 (1%)

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            + A I A++ +G + +A+D F +M      P    YN ++     A   +++ K+   M
Sbjct: 52  LYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAHKVYVRM 111

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
              G V P+L T+ + +R++C       A  ++  +   G     V Y T+      +G 
Sbjct: 112 LAAG-VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGH 166

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
              A ++  +M H  V PN      ++   CK G + EA      + + G+  NL  +N+
Sbjct: 167 THDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNI 226

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
            I+G  E         ++  M+ + V PDV+TY+T++          +       M   G
Sbjct: 227 WIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQG 285

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
             PD   Y+ +  GY +    ++A ELL   +  GF P+ V + ++I+G C++G ++RA+
Sbjct: 286 CLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERAL 345

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           E+F++    G+ P++  + +L+ G         A +++  M   G HP   T+
Sbjct: 346 ELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTY 398



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 149/300 (49%), Gaps = 4/300 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +E C   +++   ++N L + G   +A  + N+ I  G+ P + T+ TL+     + +
Sbjct: 386 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 445

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +S   ++ ++ E G+ PD+I +N+V+N   ++G + E  +TF +M   G  P   TYN 
Sbjct: 446 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 505

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI+ +  + K EE+ K++  MS+EG + P+  ++N L+  +C   ++  A+ +  K+   
Sbjct: 506 LIENFCRSNKMEEASKVIVKMSQEG-LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 564

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G      T+NT+  A++       AE++  EM   G + +  T  ++I G CK   +  A
Sbjct: 565 GYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA 624

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M + G  P++  F  +I              ++ +M +  V P+V+   TI+NA
Sbjct: 625 YMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNA 682


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 223/467 (47%), Gaps = 36/467 (7%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A + FN ++   H P ++ +  +L +    K +++  S+  ++E  G+ PD I  N +I
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N F   G +        K+ + G  P T T NTLIKG  + G+ ++++   D +  +G  
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG-F 160

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           + N  +Y  L+   C   +   A  ++ K+     KP+VV Y+TI  A  +     +A  
Sbjct: 161 QLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYG 220

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  EM   G+  +  T   +I G+C EGK+KEA+     M    ++PN+  +N+L+    
Sbjct: 221 LFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +         VLA+M +  V PDVITYST+M+ +     + K + +F+ M   G+ PD H
Sbjct: 281 KEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHP---------------------------- 421
            Y+IL  G+ + +  ++A  L   M +    P                            
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 422 -------NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
                  NV+ ++++I G C +G +DRAI +F+KM + G+ PN  TF  L+ G  +  + 
Sbjct: 401 HDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRL 460

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             A+E+ Q +   G H    T+ ++ +     GL +EA  +LSK+++
Sbjct: 461 KDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMED 507



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 208/392 (53%), Gaps = 1/392 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+  L  +G+ ++A    + L+  G + + V+Y TL+  +       +   ++ ++
Sbjct: 131 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKI 190

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +     P+ + ++ +I+A  +   + EA   F +M   G++    TY+TLI G+ I GK 
Sbjct: 191 DGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKL 250

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E++ LL+ M  +  + PN+ TYN+LV A C E  + EA +V+  M  + +KPDV+TY+T
Sbjct: 251 KEAIGLLNEMVLK-TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    E  +A+ V   M   GV P+  T  I+I+G+CK   + EAL   + M +  
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P +V ++ LI G  +      V +++  M +     +VITYS++++     G +D+  
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAI 429

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F+ M   GI+P+   ++IL  G  +    + A+E+   ++  G+H NV  +  +I G 
Sbjct: 430 ALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGH 489

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           C  G ++ A+ +  KM ++G  P+  TFE ++
Sbjct: 490 CKQGLLEEALTMLSKMEDNGCIPDAVTFEIII 521



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 160/330 (48%), Gaps = 5/330 (1%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + ++++L +     EA  +F+ +   G    +VTY+TL+    I+ +      +++++  
Sbjct: 203 STIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVL 262

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             ++P+   +N +++A  + G ++EA      M ++ + P   TY+TL+ GY +  + ++
Sbjct: 263 KTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKK 322

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  + + MS  G V P++ TY +L+  +C  K + EA N+  +M    M P +VTY+++ 
Sbjct: 323 AQHVFNAMSLMG-VTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLI 381

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               ++G      ++I EM   G   N  T   +I G CK G +  A+     MK+ G+ 
Sbjct: 382 DGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIR 441

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLA--LMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           PN   F +L+ G  +        EV    L K + +N  V TY+ +++     G +++  
Sbjct: 442 PNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLN--VYTYNVMIDGHCKQGLLEEAL 499

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
            +   M   G  PDA  + I+     ++ E
Sbjct: 500 TMLSKMEDNGCIPDAVTFEIIIIALFKKDE 529



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/246 (28%), Positives = 122/246 (49%), Gaps = 5/246 (2%)

Query: 102  GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
            G +P L T   L+       +     SI++++ + G  PD+I F  +IN     G + +A
Sbjct: 956  GIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKA 1015

Query: 162  MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV-KPNLRTYNVLV 220
            +    K+   G      +Y TLI G    G    ++KLL  +  +G + KP++  YN ++
Sbjct: 1016 LHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKI--DGRLTKPDVVMYNTII 1073

Query: 221  RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
             A C  + +++A+ +  +M   G+  DVVTYNT+   +   G+  +A  ++ +M    + 
Sbjct: 1074 DALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTIN 1133

Query: 281  PNGRTCGIIISGYCKEGK--IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
            PN RT  I++   CKEGK  + E+L     M++ G   N V F ++I    E  + D V+
Sbjct: 1134 PNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVE 1193

Query: 339  EVLALM 344
            ++L  M
Sbjct: 1194 KLLHEM 1199



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 67/265 (25%), Positives = 127/265 (47%), Gaps = 2/265 (0%)

Query: 227  KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
            K+ + A ++ H++   G++PD+ T N +   +   G+      ++ ++   G  P+  T 
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 287  GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
              +I+G C +G++ +AL F   +   G   N V +  LI G  +I D     ++L  +  
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDG 1059

Query: 347  FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
                PDV+ Y+TI++A      + K   +F +M   GI  D   Y+ L  G+    + ++
Sbjct: 1060 RLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKE 1119

Query: 407  AEELLMTMIESGFHPNVVIFTTIISGWCSDGS--MDRAIEVFDKMCEHGVSPNLKTFETL 464
            A  LL  M+    +PNV  +  ++   C +G   +D ++ +  KM ++G   N  TFE +
Sbjct: 1120 AIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEII 1179

Query: 465  MWGYSEARQPWRAEEILQIMKAFGV 489
            +    E  +  + E++L  M A G+
Sbjct: 1180 ISALFEKDENDKVEKLLHEMIARGL 1204



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 136/331 (41%), Gaps = 35/331 (10%)

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           +N+ +A +  ++M      P ++ +N I  ++A+      A  +   +E  G+QP+  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF------------------ 328
            I+I+ +C  G+I         + + G  P+ V  N LIKG                   
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 329 -----------------VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
                             +I D     ++L  +      P+V+ YSTI++A      + +
Sbjct: 158 QGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSE 217

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F +M   GI  D   YS L  G+  E + ++A  LL  M+    +PNV  +  ++ 
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             C +G +  A  V   M +  V P++ T+ TLM GY    +  +A+ +   M   GV P
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              T+ +L        +  EA  +  ++  K
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQK 368



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 128/267 (47%), Gaps = 5/267 (1%)

Query: 121  KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
            K +++  S+  ++E  G+ PD    N +IN F   G +        K+ + G  P T T+
Sbjct: 940  KHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITF 999

Query: 181  NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
             TLI G  + G+  +++   D +  +G  + N  +Y  L+   C   +   A  ++ K+ 
Sbjct: 1000 TTLINGLCLKGQVNKALHFHDKLLAQG-FQLNQVSYGTLINGVCKIGDTRAAIKLLRKID 1058

Query: 241  ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
                KPDVV YNTI  A  ++    +A  +  EM   G+  +  T   +I G+C  GK+K
Sbjct: 1059 GRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLK 1118

Query: 301  EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYS 357
            EA+     M    ++PN+  +N+L+    +   +D +DE L+++ +   N    + +T+ 
Sbjct: 1119 EAIGLLNKMVLKTINPNVRTYNILVDALCK-EGKDLLDESLSMLSKMEDNGCKANAVTFE 1177

Query: 358  TIMNAWSTAGFMDKCKEIFDDMGKAGI 384
             I++A       DK +++  +M   G+
Sbjct: 1178 IIISALFEKDENDKVEKLLHEMIARGL 1204



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 114/208 (54%), Gaps = 3/208 (1%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
            + T L+N L  +G+  +A    + L+  G + + V+Y TL+  +       +   ++ ++
Sbjct: 998  TFTTLINGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKI 1057

Query: 134  EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            +     PD + +N +I+A  +   + +A   F++M   G++    TYNTLI G+ I GK 
Sbjct: 1058 DGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKL 1117

Query: 194  EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN--ITEAWNVMHKMAASGMKPDVVTY 251
            +E++ LL+ M  +  + PN+RTYN+LV A C E    + E+ +++ KM  +G K + VT+
Sbjct: 1118 KEAIGLLNKMVLK-TINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTF 1176

Query: 252  NTIATAYAQNGEADQAEEVIVEMEHNGV 279
              I +A  +  E D+ E+++ EM   G+
Sbjct: 1177 EIIISALFEKDENDKVEKLLHEMIARGL 1204



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 103/193 (53%), Gaps = 3/193 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+N   +     EA  +F  + +    P +VTY++L+  L    R   +  ++ 
Sbjct: 339 VHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLID 398

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G   + I ++++I+   ++G+++ A+  F KMK+ G+ P T T+  L+ G    G
Sbjct: 399 EMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGG 458

Query: 192 KPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           + +++ ++  DL+++  ++  N+ TYNV++   C +  + EA  ++ KM  +G  PD VT
Sbjct: 459 RLKDAQEVFQDLLTKGYHL--NVYTYNVMIDGHCKQGLLEEALTMLSKMEDNGCIPDAVT 516

Query: 251 YNTIATAYAQNGE 263
           +  I  A  +  E
Sbjct: 517 FEIIIIALFKKDE 529



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 107/222 (48%), Gaps = 2/222 (0%)

Query: 302  ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
            A+  +  ++  G+ P+L   N+LI  F  +        +LA + +   +PD IT++T++N
Sbjct: 945  AVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLIN 1004

Query: 362  AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                 G ++K     D +   G + +  +Y  L  G  +  +   A +LL  +      P
Sbjct: 1005 GLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKP 1064

Query: 422  NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            +VV++ TII   C    + +A  +F +M   G+S ++ T+ TL++G+    +   A  +L
Sbjct: 1065 DVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLL 1124

Query: 482  QIMKAFGVHPQKSTFLLLAEA--RRATGLTKEAKRILSKIKN 521
              M    ++P   T+ +L +A  +    L  E+  +LSK+++
Sbjct: 1125 NKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMED 1166



 Score = 47.4 bits (111), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 57/110 (51%), Gaps = 5/110 (4%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++ L + G+ ++AQ +F +L+  G+  ++ TY  ++     Q       +++S++
Sbjct: 446 TFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKM 505

Query: 134 EENGMDPDSIFFNAVINAF---SESGNMEEAMDTFWKMKE--SGLTPTTS 178
           E+NG  PD++ F  +I A     E+G         W++ E   G TP+ +
Sbjct: 506 EDNGCIPDAVTFEIIIIALFKKDENGGNVGFDKKVWEIVEHKKGETPSIT 555


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 220/416 (52%), Gaps = 1/416 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L   L  +G+ Q+A    + ++  G     ++Y TL+  L       +   ++ +V
Sbjct: 157 TFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRV 216

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + N + P+ + +N +I++  +   + EA D F +M   G++P   TY+ LI G+ I GK 
Sbjct: 217 DGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKL 276

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++++ L + M  E N+KP++ T+N+LV A+C +  + E   V   M   G+KP+ VTYN+
Sbjct: 277 KDAIDLFNKMILE-NIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNS 335

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    E ++A+ +   M   GV P+ ++  I+I+G+CK  K  EA+   + M    
Sbjct: 336 LMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKN 395

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P++V ++ LI G  +        +++  M +  V P++ TY++I++A      +DK  
Sbjct: 396 IIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAI 455

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +       G +PD   YSIL KG  +  + E A ++   ++  G++ +V  +T +I G+
Sbjct: 456 ALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGF 515

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           C +G  + A+ +  KM ++G  P+ KT+E ++    +  +   AE++L+ M A G+
Sbjct: 516 CVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/466 (24%), Positives = 225/466 (48%), Gaps = 34/466 (7%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A ++FN L+     P    +  +L +L   K ++++  +  ++E  G+ P+ +  N +I
Sbjct: 68  DAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 127

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL---------- 199
           N F + G +  A   F K+ + G  P T T+ TL KG  + G+ +++             
Sbjct: 128 NCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFH 187

Query: 200 ----------------------LDLMSR-EGN-VKPNLRTYNVLVRAWCNEKNITEAWNV 235
                                 LDL+ R +GN V+PN+  YN ++ + C  K + EA+++
Sbjct: 188 FDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDL 247

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
             +M + G+ PDVVTY+ + + +   G+   A ++  +M    ++P+  T  I+++ +CK
Sbjct: 248 FSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCK 307

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           +GK+KE       M + G+ PN V +N L+ G+  + + +    +   M +  VNPD+ +
Sbjct: 308 DGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQS 367

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           YS ++N +      D+   +F +M +  I PD   YS L  G  +      A +L+  M 
Sbjct: 368 YSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMH 427

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           + G  PN+  + +I+   C    +D+AI +  K  + G  P++ T+  L+ G  ++ +  
Sbjct: 428 DRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLE 487

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            A ++ + +   G +     + ++ +     GL  EA  +LSK+++
Sbjct: 488 DARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMED 533



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/388 (26%), Positives = 197/388 (50%), Gaps = 7/388 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L++ L + G+ + A  +   +     +P++V Y T++ ++   K  N    + S++
Sbjct: 192 SYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEM 251

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+ PD + ++A+I+ F   G +++A+D F KM    + P   T+N L+  +   GK 
Sbjct: 252 VSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKM 311

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E   + D+M ++G +KPN  TYN L+  +C  K + +A ++ + MA  G+ PD+ +Y+ 
Sbjct: 312 KEGKTVFDMMMKQG-IKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSI 370

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + +  + D+A  +  EM    + P+  T   +I G  K G+I  AL+    M + G
Sbjct: 371 MINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRG 430

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMD 370
           V PN+  +N ++    +      VD+ +AL+ +F+     PD+ TYS ++     +G ++
Sbjct: 431 VPPNICTYNSILDALCK---THQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLE 487

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             +++F+D+   G   D +AY+I+ +G+  E    +A  LL  M ++G  P+   +  II
Sbjct: 488 DARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIII 547

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
                    D A ++  +M   G+  N 
Sbjct: 548 LSLFKKDENDMAEKLLREMIARGLPLNF 575



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 81/372 (21%), Positives = 185/372 (49%), Gaps = 1/372 (0%)

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            F  + ++++A+  F ++     TP    +N ++ G  +  K   +V  L        +K
Sbjct: 59  TFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKIL-GSLVKSKHYHTVLYLSQKMEFRGIK 117

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PNL   N+L+  +C    I  A++V  K+   G  PD +T+ T++      G+  QA   
Sbjct: 118 PNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLF 177

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             ++   G   +  + G +I G CK G+ + AL   + +    V PN+V++N +I    +
Sbjct: 178 HDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCK 237

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           +   +   ++ + M    ++PDV+TYS +++ +   G +    ++F+ M    IKPD + 
Sbjct: 238 VKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYT 297

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           ++IL   + ++ + ++ + +   M++ G  PN V + +++ G+C    +++A  +F+ M 
Sbjct: 298 FNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMA 357

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           + GV+P+++++  ++ G+ + ++   A  + + M    + P   T+  L +    +G   
Sbjct: 358 QGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRIS 417

Query: 511 EAKRILSKIKNK 522
            A +++ ++ ++
Sbjct: 418 YALQLVDQMHDR 429



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 58/212 (27%), Positives = 114/212 (53%), Gaps = 3/212 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           ++S + ++N   +  K  EA  +F  +      P +VTY++L+  L+   R +    ++ 
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G+ P+   +N++++A  ++  +++A+    K K+ G  P  STY+ LIKG   +G
Sbjct: 425 QMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSG 484

Query: 192 KPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           K E++ K+  DL+ +  N+  ++  Y ++++ +C E    EA  ++ KM  +G  PD  T
Sbjct: 485 KLEDARKVFEDLLVKGYNL--DVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKT 542

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
           Y  I  +  +  E D AE+++ EM   G+  N
Sbjct: 543 YEIIILSLFKKDENDMAEKLLREMIARGLPLN 574


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 227/445 (51%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N++ ++G   EA  +  +L   G +P +V+Y  +L  L + KR+  +  +M ++    
Sbjct: 235 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 294

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + FN +I+    +G  E   +   +M E G TP    Y T+I G    G  E + 
Sbjct: 295 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAH 354

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L+ M   G +KPN+  YN L++  C+ +   E   ++ +M       D VT+N +   
Sbjct: 355 EILNRMPSYG-LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 413

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + QNG  D+  E++ +M  +G  P+  T   +I+G+CKEG I EA+   ++M   G  PN
Sbjct: 414 FCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 473

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + + +++KG          +++++ M +     + IT++T++N     G +++  E+  
Sbjct: 474 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 533

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G  PD  +YS +  G  +  + ++A ELL  M+  G  PN +I+++I S    +G
Sbjct: 534 QMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 593

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +++ I++FD + +  +  +   +  ++    +  +  RA E L  M + G  P +ST+ 
Sbjct: 594 RINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 653

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
           +L     + G  KEA+ +L+++ +K
Sbjct: 654 ILIRGLASEGFVKEAQEMLTELCSK 678



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 187/396 (47%), Gaps = 34/396 (8%)

Query: 92  QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINA 151
           Q +   ++     P++VT+ TL++ L     F  +H +++Q+ E+G  PD   +  +I+ 
Sbjct: 284 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDG 343

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL----------- 200
             + G++E A +   +M   GL P    YNTL+KG   A + EE+ +LL           
Sbjct: 344 ICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLD 403

Query: 201 --------DLMSREGNVK---------------PNLRTYNVLVRAWCNEKNITEAWNVMH 237
                   D   + G V                P++ TY  ++  +C E  I EA  ++ 
Sbjct: 404 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 463

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
            M A G KP+ ++Y  +            AE+++ +M   G   N  T   +I+  CK+G
Sbjct: 464 SMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKG 523

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
            +++A+   + M   G  P+L+ ++ +I G  +    D   E+L +M    ++P+ I YS
Sbjct: 524 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 583

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           +I +A S  G ++K  ++FD++    I+ DA  Y+ +     +  E E+A E L  M+ S
Sbjct: 584 SIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSS 643

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           G  PN   +T +I G  S+G +  A E+  ++C  G
Sbjct: 644 GCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 679



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 159/355 (44%), Gaps = 39/355 (10%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           YN ++ GY  AG+ E + +L   +     V PN  TY  +VRA C    I +A  V+ +M
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP----VPPNAYTYFPVVRALCARGRIADALAVLDEM 185

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
              G  P    Y+ I  A  + G    A  V+ ++   G   +   C ++++  C +G +
Sbjct: 186 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 245

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            EAL   R +  +G  P++V +N ++KG         V E++  M      P+++T++T+
Sbjct: 246 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 305

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++     G  ++  E+   M + G  PD   Y+ +  G  +E   E A E+L  M   G 
Sbjct: 306 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 365

Query: 420 HPNVVIFTTIISGWCS-----------------------------------DGSMDRAIE 444
            PNVV + T++ G CS                                   +G +DR IE
Sbjct: 366 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 425

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           + ++M EHG  P++ T+ T++ G+ +      A  +L+ M A G  P   ++ ++
Sbjct: 426 LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 480



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 124/231 (53%), Gaps = 1/231 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T ++N   + G   EA  +  ++   G KP+ ++YT +L  L   +R+     +MS
Sbjct: 439 VITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMS 498

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G   + I FN +IN   + G +E+A++   +M  +G +P   +Y+T+I G G AG
Sbjct: 499 QMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 558

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E+++LL++M  +G + PN   Y+ +  A   E  I +   +   +  + ++ D V Y
Sbjct: 559 KTDEALELLNVMVNKG-MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLY 617

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           N + ++  + GE ++A E +  M  +G  PN  T  I+I G   EG +KEA
Sbjct: 618 NAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEA 668



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 125/273 (45%), Gaps = 3/273 (1%)

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +   Y + G+ + A  +   +    V PN  T   ++   C  G+I +AL     M 
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  P   +++++++             VL  +       DV   + ++NA    G +D
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +  D+   G +PD  +Y+ + KG    +     +EL+  M+     PN+V F T+I
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           S  C +G  +R  EV  +M EHG +P+++ + T++ G  +      A EIL  M ++G+ 
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           P    +  L +   +    +E + +L+++ +K+
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 399



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 77/140 (55%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + +++ L + GK  EA  + N ++  G  P+ + Y+++ +AL+ + R N +  +   +
Sbjct: 546 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 605

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++  +  D++ +NAVI++  + G  E A++    M  SG  P  STY  LI+G    G  
Sbjct: 606 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 665

Query: 194 EESVKLLDLMSREGNVKPNL 213
           +E+ ++L  +  +G ++ +L
Sbjct: 666 KEAQEMLTELCSKGALRKHL 685


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 224/447 (50%), Gaps = 9/447 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIMSQ 132
           + T L+  L   GK  EA  +F+ ++  G +P+ VTY TL+  L  +     +I  + S 
Sbjct: 146 TFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSM 205

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           V++N  +P+ I +N +I+   +   + EA++ F +M   G++P  STYN++I G     +
Sbjct: 206 VQKN-CEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSE 264

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +    L++ M  +  + PN+  +  LV A C E  +T A +V+  M   G++PDVVTY 
Sbjct: 265 WKHVATLMNEMV-DSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYT 323

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +   +    E D+A++V   M   G  PN  +   +I+GYCK  +I +A+     M + 
Sbjct: 324 ALMDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQR 383

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFM 369
            + PN+V +N LI G   +     + + +AL  E   +   PD++TY  +++       +
Sbjct: 384 ELVPNIVTYNTLIHGLCHV---GRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHL 440

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D+   +   +  + + PD  +Y+I+  G  R  E E A +L  ++   G HP+V  +T +
Sbjct: 441 DQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIM 500

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I+G C  G +  A ++F +M   G SP+  T+  +  G+    +   A ++LQ M   G 
Sbjct: 501 INGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGF 560

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRIL 516
               ST  L+ E     GL +  K+IL
Sbjct: 561 SADASTITLIVEMLSDDGLDQSVKQIL 587



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/502 (23%), Positives = 222/502 (44%), Gaps = 39/502 (7%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           EA + FN ++     PS+V +  +L ++   K ++++ S+  Q++  G+  D      VI
Sbjct: 57  EALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAIVI 116

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG-- 207
           N+F     ++       K+ + G  P T+T+ TLI+G  + GK  E++ L D M  EG  
Sbjct: 117 NSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEGFQ 176

Query: 208 --------------------------------NVKPNLRTYNVLVRAWCNEKNITEAWNV 235
                                           N +PN+ TYN ++     ++ + EA N+
Sbjct: 177 PNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNI 236

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
             +M A G+ P+V TYN+I     +  E      ++ EM  + + PN      ++   CK
Sbjct: 237 FSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCK 296

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           EG +  A      M + GV P++V +  L+ G     + D  D+V   M      P+VI+
Sbjct: 297 EGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNVIS 356

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           YST++N +     +DK   +F++M +  + P+   Y+ L  G         A  L   M+
Sbjct: 357 YSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMV 416

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
            SG  P++V +  ++   C    +D+A+ +   +    ++P+++++  ++ G     +  
Sbjct: 417 ASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELE 476

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP 535
            A ++   + + G+HP   T+ ++       GL  EA ++      +E   +  + +D  
Sbjct: 477 AAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLF-----REMNTDGCSPDDCT 531

Query: 536 VESLERLYHKEATTASYPNLLQ 557
              + R + +   T S   LLQ
Sbjct: 532 YNLITRGFLRNNETLSAIQLLQ 553



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 92/397 (23%), Positives = 198/397 (49%), Gaps = 14/397 (3%)

Query: 60  CSFCMNKESCRTVRSMTK------------LMNSLIERGKPQEAQAIFNNLIEGGHKPSL 107
           C    ++ + R +RSM +            +++ L +  +  EA  IF+ +I  G  P++
Sbjct: 190 CKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNV 249

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
            TY +++  L     +  + ++M+++ ++ + P+ + F  +++A  + G +  A D    
Sbjct: 250 STYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDV 309

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M + G+ P   TY  L+ G+ +  + +E+ K+ D M R+G   PN+ +Y+ L+  +C  +
Sbjct: 310 MIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKG-CAPNVISYSTLINGYCKIQ 368

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
            I +A  +  +M    + P++VTYNT+       G    A  +  EM  +G  P+  T  
Sbjct: 369 RIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYR 428

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           I++   CK   + +A+   + ++   + P++  +N++I G   + + +   ++ + +   
Sbjct: 429 ILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSK 488

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            ++PDV TY+ ++N     G + +  ++F +M   G  PD   Y+++ +G++R  E   A
Sbjct: 489 GLHPDVWTYTIMINGLCLQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSA 548

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            +LL  M+  GF  +    T I+     DG +D++++
Sbjct: 549 IQLLQEMLGRGFSADASTITLIVEMLSDDG-LDQSVK 584



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/305 (25%), Positives = 148/305 (48%), Gaps = 1/305 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V   T L+++L + G    A  + + +I+ G +P +VTYT L+    ++   +    +  
Sbjct: 284 VVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFD 343

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  P+ I ++ +IN + +   +++AM  F +M +  L P   TYNTLI G    G
Sbjct: 344 TMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVG 403

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  +++ L   M   G + P+L TY +L+   C  +++ +A  ++  +  S + PD+ +Y
Sbjct: 404 RLRDAIALFHEMVASGQI-PDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNLAPDIQSY 462

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     + GE + A ++   +   G+ P+  T  I+I+G C +G + EA +  R M  
Sbjct: 463 NIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATKLFREMNT 522

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P+   +NL+ +GF+   +     ++L  M     + D  T + I+   S  G    
Sbjct: 523 DGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLIVEMLSDDGLDQS 582

Query: 372 CKEIF 376
            K+I 
Sbjct: 583 VKQIL 587


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 237/509 (46%), Gaps = 53/509 (10%)

Query: 68  SCRTVRSMTKLMNSLIERG----KPQEAQAIFNNLIEGG-HKPSLVTYTTLLAALTIQKR 122
           +CRT     +L +S+  R      PQ   AI + L     +  +      L+  L   +R
Sbjct: 46  TCRTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQKSRR 105

Query: 123 FN---SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM----------------- 162
                S+ +++S++E +   P+   F  +I AFSE G +EEA+                 
Sbjct: 106 SRICCSVFNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNM 163

Query: 163 -----------DTFWK----MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
                      DT WK    M   G +P   TY TLI G    G   ++ +L D M  E 
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI-EK 222

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
            + P +  Y +L+R  C E  I+EA ++   M  SGM P++ TYNT+   Y +     +A
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
            E+  EM  +G+ PN  T GI+I G CK  ++  A +F   M  +GV PN+ ++N LI G
Sbjct: 283 LELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342

Query: 328 FVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           + +      + E L+L  E     + PDV TYS ++        M++   +  +M K G 
Sbjct: 343 YCK---AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+A  Y+ L  GY +E   EKA E+   M E G  PN++ F+T+I G+C  G M+ A+ 
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           ++ +M   G+ P++  +  L+ G+ +      A  + + M+  G+HP   T   L +   
Sbjct: 460 LYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519

Query: 505 ATGLTKEA-KRILSKIKNK---ERTNEME 529
             G   +A K  L+K        +TNE++
Sbjct: 520 KDGRISDAIKLFLAKTGTDTTGSKTNELD 548



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 216/438 (49%), Gaps = 14/438 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L+++G+      ++ +++  G  P++VTY TL+     Q  F     +  ++ E  
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P  + +  +I        + EA   F  M+ SG+ P   TYNT++ GY      ++++
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L   M  +G + PN+ T+ +L+   C    +  A   +  MA+ G+ P++  YN +   
Sbjct: 284 ELYXEMLGDG-LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G   +A  +  E+E + + P+  T  I+I G C   +++EA    + MK+ G  PN
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +N LI G+ +  + +   EV + M E  + P++IT+ST+++ +  AG M+    ++ 
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G+ PD  AY+ L  G+ ++   ++A  L   M E+G HPNV   + +I G C DG
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522

Query: 438 SMDRAIEVF-------------DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +  AI++F             +++     SPN   +  L+ G     + ++A +    M
Sbjct: 523 RISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDM 582

Query: 485 KAFGVHPQKSTFLLLAEA 502
           +  G+ P   T +++ + 
Sbjct: 583 RCSGLRPDVFTCIVIIQG 600



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 208/442 (47%), Gaps = 30/442 (6%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M+   +    ++A  ++  ++  G  P++VT+  L+  L       S    +  +   G
Sbjct: 269 MMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +N +I+ + ++GN+ EA+    ++++  + P   TY+ LIKG     + EE+ 
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M ++G + PN  TYN L+  +C E N+ +A  V  +M   G++P+++T++T+   
Sbjct: 389 GLLQEMKKKGFL-PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDG 447

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G+ + A  +  EM   G+ P+      +I G+ K+G  KEA R  + M+E G+HPN
Sbjct: 448 YCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPN 507

Query: 318 LVIFNLLIKGFVE----------IMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWS 364
           +   + LI G  +           + + G D   +   E      +P+ + Y+ ++    
Sbjct: 508 VFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLC 567

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
           T G + K  + F DM  +G++PD     ++ +G+ R         L   +++ G  PN  
Sbjct: 568 TDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSS 627

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ-- 482
           ++  +  G+   G +  A+      C  GV P L    +  WG    R  ++   + +  
Sbjct: 628 VYRVLAKGYEESGYLKSALS----FCGEGVQP-LDRVNSEPWGSYTIRSRFQLCVVTEKK 682

Query: 483 -----IMKAFGVHPQKSTFLLL 499
                 + AFG+H    +F+LL
Sbjct: 683 ECHSSYLTAFGIH----SFVLL 700



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 107/240 (44%), Gaps = 28/240 (11%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           +P +A  +F  +     +P +VT T  L+A       +    I + +   G+D D    N
Sbjct: 729 RPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNN 788

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           ++IN +S+ G +  A   F   ++  +T    T+ ++I G+ + G+ EE+++L   M +E
Sbjct: 789 SLINMYSKCGEIGTARRLFDGTQKKDVT----TWTSMIVGHALHGQAEEALQLFTEM-KE 843

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            N            RA  N++N         +  +S + P+ VT+  +  A +  G  ++
Sbjct: 844 TN-----------KRARKNKRN--------GEXESSLVLPNDVTFMGVLMACSHAGLVEE 884

Query: 267 AEEVIVEM-EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            ++    M E   ++P     G ++   C+ G + EA  F   M    V PN V++  L+
Sbjct: 885 GKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRTLL 941



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 82/421 (19%), Positives = 158/421 (37%), Gaps = 96/421 (22%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH-----SIM 130
           T L+  L   G+  +A   F+++   G +P + T       + IQ  F ++H      + 
Sbjct: 560 TALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFT-----CIVIIQGHFRAMHLRDVMMLQ 614

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF--------------W-------KMK 169
           + + + G+ P+S  +  +   + ESG ++ A+                 W       + +
Sbjct: 615 ADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGEGVQPLDRVNSEPWGSYTIRSRFQ 674

Query: 170 ESGLTPTTSTYNTLIKGYGIAG--------------KPEESVKLLDLMSREGNVKPNLRT 215
              +T     +++ +  +GI                 P E +K +  + ++G+ +PN   
Sbjct: 675 LCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQRPN--- 731

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
                          +A  +  +M     +PD+VT     +A A  G  D  E +   + 
Sbjct: 732 ---------------KALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIR 776

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALR-FARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
           H G+  +      +I+ Y K G+I  A R F  T K+       +I    + G  E    
Sbjct: 777 HRGLDTDLCLNNSLINMYSKCGEIGTARRLFDGTQKKDVTTWTSMIVGHALHGQAE---- 832

Query: 335 DGVDEVLALMKEFR-------------------VNPDVITYSTIMNAWSTAGFMDKCKEI 375
               E L L  E +                   V P+ +T+  ++ A S AG +++ K+ 
Sbjct: 833 ----EALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQH 888

Query: 376 FDDMGK-AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           F  M +   ++P    +  +     R     +A E ++ M      PN V++ T++ G C
Sbjct: 889 FRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLL-GAC 944

Query: 435 S 435
           S
Sbjct: 945 S 945


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/431 (28%), Positives = 211/431 (48%), Gaps = 4/431 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+      GK ++A  I   L   G  P ++TY  L+       +   I   + 
Sbjct: 141 VIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVITYNVLIGGYC---KSGEIDKALE 197

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +E   + PD + +N ++ +  +SG ++EAM+   +  +    P   TY  LI+      
Sbjct: 198 VLERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDS 257

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              +++KLLD M ++G  KP++ TYNVL+   C E  + EA   ++ M + G KP+V+T+
Sbjct: 258 GVGQAMKLLDEMRKKG-CKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITH 316

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N I  +    G    AE ++ +M   G  P+  T  I+I+  C++  +  A+     M +
Sbjct: 317 NIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPK 376

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           +G  PN + +N L+ GF +    D   E L +M      PD++TY+T++ A    G +D 
Sbjct: 377 HGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDA 436

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             EI + +   G  P    Y+ +  G  +  + E A ELL  M   G  P+++ ++T++ 
Sbjct: 437 AVEILNQLSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLR 496

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G   +G +D AI++F  M    + P+  T+  +M G  +A+Q  RA + L  M   G  P
Sbjct: 497 GLGREGKVDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKP 556

Query: 492 QKSTFLLLAEA 502
            ++T+ +L E 
Sbjct: 557 TEATYTILIEG 567



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/406 (25%), Positives = 202/406 (49%), Gaps = 39/406 (9%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N  +     +G +EE +    +M   G  P      +LI+G+  +GK +++ ++++++  
Sbjct: 110 NIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEILEN 169

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G V P++ TYNVL+  +C    I +A  V+ +M+ +   PDVVTYNTI  +   +G+  
Sbjct: 170 SGAV-PDVITYNVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDSGKLK 225

Query: 266 QAEEV-----------------------------------IVEMEHNGVQPNGRTCGIII 290
           +A EV                                   + EM   G +P+  T  ++I
Sbjct: 226 EAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLI 285

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
           +G CKEG++ EA++F   M  YG  PN++  N++++           + +L+ M     +
Sbjct: 286 NGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCS 345

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P V+T++ ++N       + +  ++ + M K G  P++ +Y+ L  G+ +E++ ++A E 
Sbjct: 346 PSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEY 405

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           L  M+  G +P++V + T+++  C DG +D A+E+ +++   G SP L T+ T++ G ++
Sbjct: 406 LEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVIDGLTK 465

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
             +   A E+L+ M+  G+ P   T+  L       G   EA +I 
Sbjct: 466 VGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIF 511



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/335 (29%), Positives = 172/335 (51%), Gaps = 10/335 (2%)

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ EE +K L+ M  +G++ P++     L+R +C      +A  +M  +  SG  PDV+T
Sbjct: 120 GELEEGLKFLERMIYQGDI-PDVIACTSLIRGFCRSGKTKKATRIMEILENSGAVPDVIT 178

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +   Y ++GE D+A EV   +E   V P+  T   I+   C  GK+KEA+       
Sbjct: 179 YNVLIGGYCKSGEIDKALEV---LERMSVAPDVVTYNTILRSLCDSGKLKEAMEVLDRQL 235

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
           +   +P+++ + +LI+      +  GV + + L+ E R     PDV+TY+ ++N     G
Sbjct: 236 QRECYPDVITYTILIEA---TCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGICKEG 292

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +D+  +  ++M   G KP+   ++I+ +          AE LL  M+  G  P+VV F 
Sbjct: 293 RLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLRKGCSPSVVTFN 352

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +I+  C    + RAI+V +KM +HG  PN  ++  L+ G+ + ++  RA E L+IM + 
Sbjct: 353 ILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDRAIEYLEIMVSR 412

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G +P   T+  L  A    G    A  IL+++ +K
Sbjct: 413 GCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSK 447



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 78/302 (25%), Positives = 153/302 (50%), Gaps = 2/302 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K+ C+  V +   L+N + + G+  EA    NN+   G KP+++T+  +L ++    R
Sbjct: 269 MRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGR 328

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +     ++S +   G  P  + FN +IN       +  A+D   KM + G  P + +YN 
Sbjct: 329 WMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNP 388

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ G+    K + +++ L++M   G   P++ TYN L+ A C +  +  A  +++++++ 
Sbjct: 389 LLHGFCQEKKMDRAIEYLEIMVSRG-CYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSK 447

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P ++TYNT+     + G+ + A E++ EM   G++P+  T   ++ G  +EGK+ EA
Sbjct: 448 GCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEA 507

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           ++    M+   + P+ V +N ++ G  +        + LA M E    P   TY+ ++  
Sbjct: 508 IKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEG 567

Query: 363 WS 364
            +
Sbjct: 568 IA 569



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/134 (27%), Positives = 67/134 (50%), Gaps = 3/134 (2%)

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           A +I  +  VR  E E+  + L  MI  G  P+V+  T++I G+C  G   +A  + + +
Sbjct: 108 ASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIMEIL 167

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G  P++ T+  L+ GY ++ +  +A E+L+ M    V P   T+  +  +   +G  
Sbjct: 168 ENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERM---SVAPDVVTYNTILRSLCDSGKL 224

Query: 510 KEAKRILSKIKNKE 523
           KEA  +L +   +E
Sbjct: 225 KEAMEVLDRQLQRE 238


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 218/454 (48%), Gaps = 3/454 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ S   L+ SL+  G+  + +A F  L+  G +P    +   + A       +   +++
Sbjct: 122 SLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDEALAML 181

Query: 131 SQV--EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
            ++   E    PD+  +N VI     SG   +A+  F +M + G+ P   TYNT+I G+ 
Sbjct: 182 RRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHV 241

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G  E   +L D M ++G  KPN+ TYNVL+   C    + E   +M +M +  M PD 
Sbjct: 242 KGGDLEAGFRLRDQMLQDGR-KPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDG 300

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TY+ +     + G++     +  E    GV     TC I+++G CK+GK+ +A +    
Sbjct: 301 FTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEM 360

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           +   G+ P   I+N LI G+ ++ D  G   +   MK   + PD ITY+ ++N       
Sbjct: 361 LVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEM 420

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           + + +++  +M K+G+ P    ++ L   Y R  + EK   +L  M + G   NV+ F +
Sbjct: 421 ITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGS 480

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++  +C +G +  A+ + D M    V PN + + +++  Y E+    +A  +++ MK+ G
Sbjct: 481 VVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSG 540

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           V     T+ LL +         EA+ ++  + N+
Sbjct: 541 VSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQ 574



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/480 (22%), Positives = 214/480 (44%), Gaps = 43/480 (8%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  +A  +F+ +++ G  P+ +TY T++          +   +  Q+ ++G  P+ + +
Sbjct: 209 GKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTY 268

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +++    +G M+E      +M    + P   TY+ L  G    G     + L     +
Sbjct: 269 NVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGESLK 328

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ----- 260
           +G V     T ++L+   C +  + +A  V+  +  +G+ P    YNT+   Y Q     
Sbjct: 329 KG-VIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQ 387

Query: 261 -------------------------NGEAD-----QAEEVIVEMEHNGVQPNGRTCGIII 290
                                    NG        +AE++++EME +GV P+  T   +I
Sbjct: 388 GAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLI 447

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF--- 347
             Y + G++++       M++ G+  N++ F  ++K F +      + E +A++ +    
Sbjct: 448 DAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCK---NGKIPEAVAILDDMIHK 504

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            V P+   Y++I++A+  +G  ++   + + M  +G+      Y++L KG  +  + ++A
Sbjct: 505 DVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEA 564

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           EEL+  +   G  P+VV + TIIS  C+ G  DRA+E+  +M ++ + P L+T+  L+  
Sbjct: 565 EELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSA 624

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE-ARRATGLTKEAKRILSKIKNKERTN 526
              A +    E + Q M    V P  S +    E   +   L KE         + ERTN
Sbjct: 625 LGSAGRVHDMECLYQHMVHKNVEPSSSIYGTRCENESKVASLKKEMSEKGIAFDDTERTN 684



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 49/217 (22%), Positives = 116/217 (53%), Gaps = 1/217 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   L+++    G+ ++   + +++ + G K +++++ +++ A     +     +I+
Sbjct: 439 SVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAIL 498

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +    + P++  +N++I+A+ ESG  E+A     KMK SG++ +  TYN L+KG    
Sbjct: 499 DDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKN 558

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + +E+ +L+  ++ +G ++P++ +YN ++ A CN+ +   A  ++ +M    ++P + T
Sbjct: 559 SQIDEAEELIYNLTNQG-LRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRT 617

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           Y+ + +A    G     E +   M H  V+P+    G
Sbjct: 618 YHPLLSALGSAGRVHDMECLYQHMVHKNVEPSSSIYG 654



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 72/153 (47%), Gaps = 1/153 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ++K+     +    ++++ IE G  ++A  +   +   G   S+ TY  LL  L    + 
Sbjct: 502 IHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQI 561

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    ++  +   G+ PD + +N +I+A    G+ + A++   +M +  + PT  TY+ L
Sbjct: 562 DEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPL 621

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
           +   G AG+  +   L   M  + NV+P+   Y
Sbjct: 622 LSALGSAGRVHDMECLYQHMVHK-NVEPSSSIY 653


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 217/409 (53%), Gaps = 4/409 (0%)

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
           +K S+++   LL+AL  +  F  +  +  ++    + P+ I FN VIN   + G + +A 
Sbjct: 191 YKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAG 250

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGY---GIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           D    MK  G  P   TYNTLI GY   G  GK  ++  +L  M  E  V PN  T+NVL
Sbjct: 251 DVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMV-ENKVSPNSVTFNVL 309

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +  +C ++N++ A  V  +M + G+KP VVTYN++       G+ ++A+ ++ EM  + +
Sbjct: 310 IDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNL 369

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           +PN  T   +I+GYCK+  ++EA      + + G+ PN++ FN L+ G+ +    +    
Sbjct: 370 KPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFL 429

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +  +M E    P+  TY+ ++  +   G M++ K + ++M   G+K D   Y+IL   + 
Sbjct: 430 LQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWC 489

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
            ++EP+KA  L+  M++ G  P+ + +  +++G+C +G++  A+ +  +M + G   N+ 
Sbjct: 490 EKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVV 549

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           T+  L+ GY    +   A  +L  M   G+ P ++T+ ++ E     G 
Sbjct: 550 TYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGF 598



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 207/401 (51%), Gaps = 12/401 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S   L+++L++  +    + ++  +I     P+L+T+ T++  L    + N    ++
Sbjct: 194 SVLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVV 253

Query: 131 SQVEENGMDPDSIFFNAVINAFSE---SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
             ++  G  P+ + +N +I+ + +    G M +A     +M E+ ++P + T+N LI G+
Sbjct: 254 DDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGF 313

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
                   ++K+ + M  +G +KP + TYN LV   CNE  + EA  ++ +M +S +KP+
Sbjct: 314 CKDENLSAALKVFEEMQSQG-LKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPN 372

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           V+TYN +   Y +    ++A E+   +   G+ PN  T   ++ GYCK GK++EA    +
Sbjct: 373 VITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQK 432

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAW 363
            M E G  PN   +N LI GF     R+G ++EV  L+ E +   V  D +TY+ +++AW
Sbjct: 433 VMLEKGFLPNASTYNCLIVGFC----REGKMEEVKNLLNEMQCRGVKADTVTYNILISAW 488

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
                  K   + D+M   G+KP    Y+IL  GY  E     A  L   M + G   NV
Sbjct: 489 CEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANV 548

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           V +  +I G+C  G ++ A  + ++M E G+ PN  T+E +
Sbjct: 549 VTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 89/322 (27%), Positives = 167/322 (51%), Gaps = 9/322 (2%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ-- 266
           + PNL T+N ++   C    + +A +V+  M   G  P+VVTYNT+   Y + G   +  
Sbjct: 226 ISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMY 285

Query: 267 -AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A+ ++ EM  N V PN  T  ++I G+CK+  +  AL+    M+  G+ P +V +N L+
Sbjct: 286 KADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLV 345

Query: 326 KGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            G   + +   ++E   L+ E     + P+VITY+ ++N +     +++ +E+FD++GK 
Sbjct: 346 NG---LCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQ 402

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ P+   ++ L  GY +  + E+A  L   M+E GF PN   +  +I G+C +G M+  
Sbjct: 403 GLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEV 462

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
             + ++M   GV  +  T+  L+  + E ++P +A  ++  M   G+ P   T+ +L   
Sbjct: 463 KNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNG 522

Query: 503 RRATGLTKEAKRILSKIKNKER 524
               G  + A  +  +++ + R
Sbjct: 523 YCMEGNLRAALNLRKQMEKEGR 544



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 90/279 (32%), Positives = 155/279 (55%), Gaps = 1/279 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A  +F  +   G KP++VTY +L+  L  + + N    ++ ++  + + P+ I +NA+IN
Sbjct: 322 ALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALIN 381

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            + +   +EEA + F  + + GLTP   T+NTL+ GY   GK EE+  L  +M  +G + 
Sbjct: 382 GYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFL- 440

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN  TYN L+  +C E  + E  N++++M   G+K D VTYN + +A+ +  E  +A  +
Sbjct: 441 PNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARL 500

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           I EM   G++P+  T  I+++GYC EG ++ AL   + M++ G   N+V +N+LI+G+  
Sbjct: 501 IDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCR 560

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
               +  + +L  M E  + P+  TY  I       GF+
Sbjct: 561 KGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFL 599



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 115/235 (48%), Gaps = 3/235 (1%)

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           +++  Y +  K    L   +   +Y    +++  N L+   V+  +  GV+ V   M   
Sbjct: 165 MLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGVEFVYKEMIRR 224

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV---REQEP 404
           +++P++IT++T++N     G ++K  ++ DDM   G  P+   Y+ L  GY    R  + 
Sbjct: 225 KISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKM 284

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            KA+ +L  M+E+   PN V F  +I G+C D ++  A++VF++M   G+ P + T+ +L
Sbjct: 285 YKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSL 344

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           + G     +   A+ +L  M +  + P   T+  L        L +EA+ +   I
Sbjct: 345 VNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNI 399


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 226/445 (50%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N++ ++G   EA  +  +L   G +P +V+Y  +L  L + KR+  +  +M ++    
Sbjct: 198 VLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 257

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + FN +I+    +G  E   +   +M E G TP    Y T+I G    G  E + 
Sbjct: 258 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAH 317

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L+ M   G +KPN+  YN L++  C+ +   E   ++ +M       D VT+N +   
Sbjct: 318 EILNRMPSYG-LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 376

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + QNG  D+  E++ +M   G  P+  T   +I+G+CKEG I EA+   ++M   G  PN
Sbjct: 377 FCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 436

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + + +++KG          +++++ M +     + IT++T++N     G +++  E+  
Sbjct: 437 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 496

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G  PD  +YS +  G  +  + ++A ELL  M+  G  PN +I+++I S    +G
Sbjct: 497 QMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 556

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +++ I++FD + +  +  +   +  ++    +  +  RA E L  M + G  P +ST+ 
Sbjct: 557 RINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 616

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
           +L     + G  KEA+ +L+++ +K
Sbjct: 617 ILIRGLASEGFVKEAQEMLTELCSK 641



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 187/396 (47%), Gaps = 34/396 (8%)

Query: 92  QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINA 151
           Q +   ++     P++VT+ TL++ L     F  +H +++Q+ E+G  PD   +  +I+ 
Sbjct: 247 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDG 306

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL----------- 200
             + G++E A +   +M   GL P    YNTL+KG   A + EE+ +LL           
Sbjct: 307 ICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLD 366

Query: 201 --------DLMSREGNVK---------------PNLRTYNVLVRAWCNEKNITEAWNVMH 237
                   D   + G V                P++ TY  ++  +C E  I EA  ++ 
Sbjct: 367 DVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLK 426

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
            M A G KP+ ++Y  +            AE+++ +M   G   N  T   +I+  CK+G
Sbjct: 427 SMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKG 486

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
            +++A+   + M   G  P+L+ ++ +I G  +    D   E+L +M    ++P+ I YS
Sbjct: 487 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 546

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           +I +A S  G ++K  ++FD++    I+ DA  Y+ +     +  E E+A E L  M+ S
Sbjct: 547 SIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSS 606

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           G  PN   +T +I G  S+G +  A E+  ++C  G
Sbjct: 607 GCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 158/355 (44%), Gaps = 39/355 (10%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           YN ++ GY  AG+ E + +L   +     V PN  TY  +VRA C    I +A  V+ +M
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP----VPPNAYTYFPVVRALCARGRIADALAVLDEM 148

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
              G  P    Y+ I  A  + G    A  V+ ++   G   +   C ++++  C +G +
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            EAL   R +  +G  P++V +N ++KG         V E++  M      P+++T++T+
Sbjct: 209 DEALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 268

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++     G  ++  E+   M + G  PD   Y+ +  G  +E   E A E+L  M   G 
Sbjct: 269 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 328

Query: 420 HPNVVIFTTIISGWCS-----------------------------------DGSMDRAIE 444
            PNVV + T++ G CS                                   +G +DR IE
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           + ++M E G  P++ T+ T++ G+ +      A  +L+ M A G  P   ++ ++
Sbjct: 389 LLEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 443



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 124/231 (53%), Gaps = 1/231 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T ++N   + G   EA  +  ++   G KP+ ++YT +L  L   +R+     +MS
Sbjct: 402 VITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMS 461

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G   + I FN +IN   + G +E+A++   +M  +G +P   +Y+T+I G G AG
Sbjct: 462 QMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 521

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E+++LL++M  +G + PN   Y+ +  A   E  I +   +   +  + ++ D V Y
Sbjct: 522 KTDEALELLNVMVNKG-MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLY 580

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           N + ++  + GE ++A E +  M  +G  PN  T  I+I G   EG +KEA
Sbjct: 581 NAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEA 631



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 65/273 (23%), Positives = 125/273 (45%), Gaps = 3/273 (1%)

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +   Y + G+ + A  +   +    V PN  T   ++   C  G+I +AL     M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  P   +++++++             VL  +       DV   + ++NA    G +D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +  D+   G +PD  +Y+ + KG    +     +EL+  M+     PN+V F T+I
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           S  C +G  +R  EV  +M EHG +P+++ + T++ G  +      A EIL  M ++G+ 
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           P    +  L +   +    +E + +L+++ +K+
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 362



 Score = 77.0 bits (188), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 77/140 (55%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + +++ L + GK  EA  + N ++  G  P+ + Y+++ +AL+ + R N +  +   +
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++  +  D++ +NAVI++  + G  E A++    M  SG  P  STY  LI+G    G  
Sbjct: 569 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 628

Query: 194 EESVKLLDLMSREGNVKPNL 213
           +E+ ++L  +  +G ++ +L
Sbjct: 629 KEAQEMLTELCSKGALRKHL 648


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 250/528 (47%), Gaps = 45/528 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V+S   +MN L+E G   +A  ++  + + G  P + T+T  + +  I  R  +   ++
Sbjct: 110 SVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLL 169

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + +   G + +++ + AVI+ F +     EA   F +M + G+ P   T+N LI      
Sbjct: 170 NNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKK 229

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +ES KL   + + G V PNL T+N+ ++  C +  I EA  ++  + + G+ PDV++
Sbjct: 230 GNVQESEKLFSKVMKRG-VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS 288

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+   + ++ +  +AE  + +M ++GV+PN  T   II+G+CK G ++ A +  R   
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348

Query: 311 EYGVHPNLVIFNLLIKG-------------FVEIMDRDG-------------------VD 338
             G  P+   ++ LI G             F E M++                     V 
Sbjct: 349 FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVL 408

Query: 339 EVLALMK---EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
           + L LMK   E   +PD+ TY+ ++N     G +     I +D    G  PD   ++ L 
Sbjct: 409 QALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            GY +++  +KA E+L TM+  G  P+V+ + T+++G C    +D  ++ F  M E G +
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCT 528

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           PN+ T+  L+  + + R+   A E+ + MK  G+ P   T   L     + G   +A  +
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588

Query: 516 LSKIKNKERTNEMEAEEDIPVESL---------ERLYHKEATTASYPN 554
              I+ + + +   A  +I + +          E+L+HK   +   P+
Sbjct: 589 FVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPD 636



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 219/440 (49%), Gaps = 2/440 (0%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C  + +  KL++ L ++G  QE++ +F+ +++ G  P+L T+   +  L  +   +    
Sbjct: 213 CPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAAR 272

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++  +   G+ PD I +N +I  F +   + EA     KM  SG+ P   TYNT+I G+ 
Sbjct: 273 LLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFC 332

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            AG  + + K+L     +G + P+  TY+ L+   CN+ ++  A  V ++    G K  +
Sbjct: 333 KAGMMQNADKILRDAMFKGFI-PDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSI 391

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           + YNT+    ++ G   QA +++ +M  +G  P+  T  ++++G CK G + +A      
Sbjct: 392 ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILND 451

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
               G  P++  FN LI G+ +  + D   E+L  M    + PDVITY+T++N    A  
Sbjct: 452 AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARK 511

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D   + F  M + G  P+   Y+IL + + ++++  +A EL   M   G  P++V   T
Sbjct: 512 LDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCT 571

Query: 429 IISGWCSDGSMDRAIEVFDKM-CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +I G CS+G +D+A E+F  +  E+  S +   F  ++  +        AE++   M   
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGS 631

Query: 488 GVHPQKSTFLLLAEARRATG 507
              P   T+ ++ ++   TG
Sbjct: 632 DCAPDNYTYRVMIDSYCKTG 651



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 224/507 (44%), Gaps = 77/507 (15%)

Query: 88  PQEAQAIFNNL-IEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN---------- 136
           P  A  +FN +  E G K +L TY  ++  L +  +F ++  +++++ +N          
Sbjct: 20  PLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVY 79

Query: 137 --------------------------GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE 170
                                       +P    +NA++N   E G   +A   + +MK+
Sbjct: 80  IGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKD 139

Query: 171 SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
            G+ P   T+   +K + I G+P  +++LL+ M  +G  + N  +Y  ++  +  E    
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQG-CEFNAVSYCAVISGFYKENCQI 198

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
           EA+++  +M   G+ PD++T+N +     + G   ++E++  ++   GV PN  T  I I
Sbjct: 199 EAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFI 258

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
            G C++G I EA R   ++   G+ P+++ +N LI GF +       +  L  M    V 
Sbjct: 259 QGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVE 318

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P+  TY+TI+N +  AG M    +I  D    G  PD   YS L  G   + +  +A  +
Sbjct: 319 PNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAV 378

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS--------------- 455
               +E GF  +++++ T++ G    G + +A+++   M EHG S               
Sbjct: 379 FYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCK 438

Query: 456 --------------------PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
                               P++ TF TL+ GY + R   +A EIL  M + G+ P   T
Sbjct: 439 MGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVIT 498

Query: 496 F--LL--LAEARRATGLTKEAKRILSK 518
           +  LL  L +AR+   +    K +L K
Sbjct: 499 YNTLLNGLCKARKLDNVVDTFKAMLEK 525



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/515 (21%), Positives = 221/515 (42%), Gaps = 57/515 (11%)

Query: 32  IPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEA 91
           +  KK N  E ++L+S                M +  C  + +    +  L  +G   EA
Sbjct: 225 VLCKKGNVQESEKLFSKV--------------MKRGVCPNLFTFNIFIQGLCRKGAIDEA 270

Query: 92  QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINA 151
             +  +++  G  P +++Y TL+       +       + ++  +G++P+   +N +IN 
Sbjct: 271 ARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIING 330

Query: 152 FSES-----------------------------------GNMEEAMDTFWKMKESGLTPT 176
           F ++                                   G+M  AM  F++  E G   +
Sbjct: 331 FCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHS 390

Query: 177 TSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
              YNTL+KG    G   ++++L+  M   G   P++ TYN++V   C    +++A  ++
Sbjct: 391 IILYNTLVKGLSKQGLVLQALQLMKDMMEHG-CSPDIWTYNLVVNGLCKMGCLSDANGIL 449

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
           +   A G  PD+ T+NT+   Y +    D+A E++  M  +G+ P+  T   +++G CK 
Sbjct: 450 NDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKA 509

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDV 353
            K+   +   + M E G  PN++ +N+LI+ F +  DR  V E + L KE +   + PD+
Sbjct: 510 RKLDNVVDTFKAMLEKGCTPNIITYNILIESFCK--DRK-VSEAMELFKEMKTRGLTPDI 566

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKA-GIKPDAHAYSILAKGYVREQEPEKAEELLM 412
           +T  T++    + G +DK  E+F  + K          ++I+   +  +     AE+L  
Sbjct: 567 VTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFH 626

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M  S   P+   +  +I  +C  G++D A     +    G+ P+  T   ++       
Sbjct: 627 KMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTH 686

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           +   A  I+ +M   G+ P++   +  A+ +    
Sbjct: 687 RLSEAVVIINLMVQNGIVPEEVNSIFEADKKEVAA 721



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 138/352 (39%), Gaps = 48/352 (13%)

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN--GVQPNGRTCGIIISGYCKEGKI 299
            G K  + TY  +      +G+ +  E+V+ EM  N       G   GI+   Y ++GK+
Sbjct: 34  DGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIM-RDYGRKGKV 92

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
           +EA                          V + +R         M  +   P V +Y+ I
Sbjct: 93  QEA--------------------------VNVFER---------MDFYDCEPSVQSYNAI 117

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           MN     G+  +  +++  M   GI PD + ++I  K +     P  A  LL  M   G 
Sbjct: 118 MNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGC 177

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
             N V +  +ISG+  +     A  +FD+M + G+ P++ TF  L+    +      +E+
Sbjct: 178 EFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEK 237

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI----- 534
           +   +   GV P   TF +  +     G   EA R+L  I ++  T ++ +   +     
Sbjct: 238 LFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFC 297

Query: 535 ---PVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDA 583
               +   E   HK   +   PN      +++   K  A  ++    +LRDA
Sbjct: 298 KHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCK--AGMMQNADKILRDA 347


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 237/509 (46%), Gaps = 53/509 (10%)

Query: 68  SCRTVRSMTKLMNSLIERG----KPQEAQAIFNNLIEGG-HKPSLVTYTTLLAALTIQKR 122
           +CRT     +L +S+  R      PQ   AI + L     +  +      L+  L   +R
Sbjct: 46  TCRTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRR 105

Query: 123 FN---SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM----------------- 162
                S+ +++S++E +   P+   F  +I AFSE G +EEA+                 
Sbjct: 106 SRICCSVFNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNM 163

Query: 163 -----------DTFWK----MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
                      DT WK    M   G +P   TY TLI G    G   ++ +L D M  E 
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI-EK 222

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
            + P +  Y +L+R  C E  I+EA ++   M  SGM P++ TYNT+   Y +     +A
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
            E+  EM  +G+ PN  T GI+I G CK  ++  A +F   M  +GV PN+ ++N LI G
Sbjct: 283 LELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342

Query: 328 FVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           + +      + E L+L  E     + PDV TYS ++        M++   +  +M K G 
Sbjct: 343 YCK---AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+A  Y+ L  GY +E   EKA E+   M E G  PN++ F+T+I G+C  G M+ A+ 
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           ++ +M   G+ P++  +  L+ G+ +      A  + + M+  G+HP   T   L +   
Sbjct: 460 LYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519

Query: 505 ATGLTKEA-KRILSKIKNK---ERTNEME 529
             G   +A K  L+K        +TNE++
Sbjct: 520 KDGRISDAIKLFLAKTGTDTTGSKTNELD 548



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 100/476 (21%), Positives = 197/476 (41%), Gaps = 47/476 (9%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+  L    + +EA  +   + + G  P+ VTY TL+     +        + S
Sbjct: 368 VFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCS 427

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ E G++P+ I F+ +I+ + ++G ME AM  + +M   GL P    Y  LI G+   G
Sbjct: 428 QMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDG 487

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP----- 246
             +E+ +L   M +E  + PN+ T + L+   C +  I++A  +   +A +G        
Sbjct: 488 NTKEAFRLHKEM-QEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKT 544

Query: 247 ---DVVTYNTIATAYAQ-NGEADQAEEVI--VEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
              D   Y   + A +   G ++    VI   ++     QP        +  + K  K  
Sbjct: 545 NELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATNNQPKAH-----LHTHLKPPKSN 599

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV----------------DEVLALM 344
           + L+  R ++       L+ F +L++     +D   +                 ++ AL+
Sbjct: 600 QTLK--RYLQSSNTSKVLLFFRILLRKNPSSIDSFSLMFALKACTLKSSLVEGKQMHALV 657

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
             F   P +   +++++ +S  G +     +FD++    +     +++ +   YV  Q P
Sbjct: 658 INFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKNLI----SWTSVISAYVDNQRP 713

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            KA +L   M      P++V  T  +S     G++D    +   +   G+  +L    +L
Sbjct: 714 NKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSL 773

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  YS+  +   A     ++      P   TF+ +  A    GL +E K+    +K
Sbjct: 774 INMYSKCGEIGTARRFSLVL------PNDVTFMGVLMACSHAGLVEEGKQHFRSMK 823



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 43/193 (22%), Positives = 88/193 (45%), Gaps = 9/193 (4%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T ++++ ++  +P +A  +F  +     +P +VT T  L+A       +    I + +
Sbjct: 699 SWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYI 758

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+D D    N++IN +S+ G +  A       + S + P   T+  ++     AG  
Sbjct: 759 RHRGLDTDLCLNNSLINMYSKCGEIGTA------RRFSLVLPNDVTFMGVLMACSHAGLV 812

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           EE  +    M  + +++P +  +  +V   C    +TEA+  + KM    ++P+ V + T
Sbjct: 813 EEGKQHFRSMKEDYSLRPRISHFGCMVDLLCRAGLLTEAYEFILKMP---VRPNAVVWRT 869

Query: 254 IATAYAQNGEADQ 266
           +  A +  G  D+
Sbjct: 870 LLGACSLQGMWDK 882



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 40/231 (17%)

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE 231
           G  P      +LI  Y   G   ++  + D +  +     NL ++  ++ A+ + +   +
Sbjct: 661 GFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSK-----NLISWTSVISAYVDNQRPNK 715

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           A  +  +M    ++PD+VT     +A A  G  D  E +   + H G+  +      +I+
Sbjct: 716 ALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLIN 775

Query: 292 GYCKEGKIKEALRFA-----------------------------RTMKE-YGVHPNLVIF 321
            Y K G+I  A RF+                             R+MKE Y + P +  F
Sbjct: 776 MYSKCGEIGTARRFSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHF 835

Query: 322 NLLIKGFVEIMDRDG-VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             +    V+++ R G + E    + +  V P+ + + T++ A S  G  DK
Sbjct: 836 GCM----VDLLCRAGLLTEAYEFILKMPVRPNAVVWRTLLGACSLQGMWDK 882


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 215/426 (50%), Gaps = 1/426 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   L+  L++    + A  +   ++  G + ++ T   ++ AL    +F+ + S +
Sbjct: 82  SINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFL 141

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S++E NG+  D + +N +I A+   G +EEA +    M + GL P+  TYN +I G    
Sbjct: 142 SEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKK 201

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+   +  +L  M   G + P+  TYN L+   C   N +EA  +  +M   G+ PD+V+
Sbjct: 202 GRYARAKGILIEMLNIG-LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVS 260

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           ++++   +++N   DQA     +M+  G+ P+     +++ GYC+ G + EAL+    M 
Sbjct: 261 FSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML 320

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G   +++ +N ++ G  +       D++   M E    PD  T++T+++     G M 
Sbjct: 321 EQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMT 380

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +F  M +  IKPD  AY+ L  G+ +  E EKA EL   MI     PN + +  +I
Sbjct: 381 KALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILI 440

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           + +CS G +  A  ++D M E G+ P L T  T++ GY  +    +A+E L  M A GV 
Sbjct: 441 NAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVA 500

Query: 491 PQKSTF 496
           P   ++
Sbjct: 501 PDHISY 506



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 220/437 (50%), Gaps = 1/437 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +    G  +EA  I N++ + G KPSL TY  ++  L  + R+     I+ ++   G
Sbjct: 159 LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 218

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD+  +N ++       N  EA + F +M   G+ P   ++++LI  +      ++++
Sbjct: 219 LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQAL 278

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M + G V  N+  Y VL+  +C   N+ EA  +  +M   G   DV+ YNTI   
Sbjct: 279 VYFRDMKKFGLVPDNV-IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNG 337

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +      A+++  EM   G  P+  T   +I G+C++G + +AL    TM +  + P+
Sbjct: 338 LCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPD 397

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N LI GF ++ + +   E+   M   ++ P+ ITY  ++NA+ + G + +   ++D
Sbjct: 398 IVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWD 457

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + GIKP     + + KGY R  +  KA+E L  MI  G  P+ + + T+I+G+  + 
Sbjct: 458 VMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVRED 517

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
           +MD+A    +KM + G+ P++ T+  +M G+    +   AE +L+ M   G++P +ST+ 
Sbjct: 518 NMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYT 577

Query: 498 LLAEARRATGLTKEAKR 514
            L           EA R
Sbjct: 578 ALINGHVTQDNLNEAFR 594



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 112/374 (29%), Positives = 193/374 (51%), Gaps = 1/374 (0%)

Query: 84  ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
            R    EA+ IF  ++  G  P LV++++L+A  +  +  +        +++ G+ PD++
Sbjct: 235 RRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNV 294

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            +  +++ +  +GNM EA+    +M E G       YNT++ G        ++ KL D M
Sbjct: 295 IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEM 354

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
              G + P+  T+  L+   C + N+T+A ++   M    +KPD+V YNT+   + + GE
Sbjct: 355 VERGAL-PDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 413

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            ++A E+   M    + PN  T GI+I+ YC  G + EA R    M E G+ P LV  N 
Sbjct: 414 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 473

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           +IKG+    D    DE L  M    V PD I+Y+T++N +     MDK     + M K G
Sbjct: 474 VIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDKAFLWINKMEKEG 533

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           + PD   Y+++  G+ R+   ++AE +L  MIE G +P+   +T +I+G  +  +++ A 
Sbjct: 534 LLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAF 593

Query: 444 EVFDKMCEHGVSPN 457
              D+M + G +P+
Sbjct: 594 RFHDEMLQRGFAPD 607



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 194/413 (46%), Gaps = 42/413 (10%)

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           +++ F+ +I  + ++  + E  + F  ++  G   + +  N+L+ G       E + ++ 
Sbjct: 47  NNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVH 106

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
             + R G ++ N+ T N++V A C +    +  + + +M  +G+  D+VTYNT+  AY +
Sbjct: 107 REVVRSG-IELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCR 165

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
            G  ++A E++  M   G++P+  T   II+G CK+G+   A      M   G+ P+   
Sbjct: 166 EGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTT 225

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +N L+   VE   RD   E   +  E     V PD++++S+++  +S    +D+    F 
Sbjct: 226 YNTLL---VESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFR 282

Query: 378 DMGKAGIKPDAHAYSILAKGYVR-----------------------------------EQ 402
           DM K G+ PD   Y++L  GY R                                   E+
Sbjct: 283 DMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEK 342

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
               A++L   M+E G  P+   FTT+I G C DG+M +A+ +F  M +  + P++  + 
Sbjct: 343 MLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYN 402

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           TL+ G+ +  +  +A E+   M +  + P   T+ +L  A  + G   EA R+
Sbjct: 403 TLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRL 455



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/309 (21%), Positives = 131/309 (42%), Gaps = 35/309 (11%)

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           GN   N   +++L+R +   + + E       + + G    +   N++     +    + 
Sbjct: 42  GNCGTNNLVFDLLIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVEL 101

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A EV  E+  +G++ N  T  I+++  CK+GK  +   F   M+  G++ ++V       
Sbjct: 102 AWEVHREVVRSGIELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMV------- 154

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
                                       TY+T++ A+   G +++  EI + M   G+KP
Sbjct: 155 ----------------------------TYNTLIGAYCREGLLEEAFEIMNSMADKGLKP 186

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
               Y+ +  G  ++    +A+ +L+ M+  G  P+   + T++   C   +   A E+F
Sbjct: 187 SLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIF 246

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            +M   GV P+L +F +L+  +S  R   +A    + MK FG+ P    + +L       
Sbjct: 247 GEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRN 306

Query: 507 GLTKEAKRI 515
           G   EA +I
Sbjct: 307 GNMLEALKI 315



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 24/102 (23%), Positives = 44/102 (43%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L+N  +      +A    N + + G  P ++TY  ++     Q R      ++ ++
Sbjct: 505 SYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKM 564

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTP 175
            E G++PD   + A+IN      N+ EA     +M + G  P
Sbjct: 565 IEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAP 606



 Score = 44.7 bits (104), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 20/67 (29%), Positives = 31/67 (46%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +MN    +G+ QEA+ +   +IE G  P   TYT L+     Q   N       ++ + G
Sbjct: 544 VMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQRG 603

Query: 138 MDPDSIF 144
             PD +F
Sbjct: 604 FAPDDVF 610


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 225/444 (50%), Gaps = 3/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N L  R +   A AI   +++ G+ PS+VT  +LL       R +   +++ Q+ E G
Sbjct: 106 MINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 165

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD++ F  +++   +     EA+    +M   G  P   TY  +I G    G+P+ ++
Sbjct: 166 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 225

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ M + G ++ ++  Y+ ++ + C  +++ +A N+  +M   G++PDV TY+++ + 
Sbjct: 226 NLLNKMEK-GKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISC 284

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G    A  ++ +M    + PN  T   +I  + KEGK+ EA +    M +  + PN
Sbjct: 285 LCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPN 344

Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +V +N LI GF  + DR D   ++  LM      PDV+TY+T++N +  A  +    E+F
Sbjct: 345 IVTYNSLINGFC-MHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELF 403

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            DM + G+  +   Y+ L  G+ +  + + A+ +   M+  G HPN++ + T++ G C +
Sbjct: 404 RDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKN 463

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +++A+ VF+ + +  + P++ T+  +  G  +A +     ++   +   GV P    +
Sbjct: 464 GKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAY 523

Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
             +       GL +EA  +  K+K
Sbjct: 524 NTMISGFCKKGLKEEAYTLFIKMK 547



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 234/445 (52%), Gaps = 3/445 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++ L +  K  EA A+   ++  G +P LVTY  ++  L  +   +   ++++++
Sbjct: 172 TFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKM 231

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+  ++ D + ++ VI++  +  ++++A++ F +M   G+ P   TY++LI      G+ 
Sbjct: 232 EKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 291

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            ++ +LL D++ R+  + PN+ T+N L+ A+  E  + EA  +  +M    + P++VTYN
Sbjct: 292 SDASRLLSDMLERK--INPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYN 349

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++   +  +   D+A+++   M      P+  T   +I+G+CK  K+ + +   R M   
Sbjct: 350 SLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRR 409

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+  N V +  LI GF +  D D    V   M    V+P+++TY+T+++     G ++K 
Sbjct: 410 GLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 469

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             +F+ + K+ ++PD + Y+I+++G  +  + E   +L  ++   G  P+V+ + T+ISG
Sbjct: 470 MVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISG 529

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C  G  + A  +F KM E G  P+  T+ TL+  +        + E+++ M++      
Sbjct: 530 FCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGD 589

Query: 493 KSTFLLLAEARRATGLTKEAKRILS 517
            ST+ L+ +      L K    +LS
Sbjct: 590 ASTYGLVTDMLHDGRLDKGFLEVLS 614



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 216/437 (49%), Gaps = 6/437 (1%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL  + +   K  EA  +F  +++    PS+V ++ LL+A+   K+F+ + S   ++E  
Sbjct: 35  KLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEIL 94

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G+  +   +N +IN       +  A+    KM + G  P+  T N+L+ G+    +  E+
Sbjct: 95  GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           V L+D M   G  +P+  T+  LV         +EA  ++ +M   G +PD+VTY  +  
Sbjct: 155 VALVDQMVEMG-YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVIN 213

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              + GE D A  ++ +ME   ++ +      +I   CK   + +AL     M   G+ P
Sbjct: 214 GLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRP 273

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++  ++ LI              +L+ M E ++NP+V+T++++++A++  G + + +++F
Sbjct: 274 DVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLF 333

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           D+M +  I P+   Y+ L  G+      ++A+++   M+     P+VV + T+I+G+C  
Sbjct: 334 DEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKA 393

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             +   +E+F  M   G+  N  T+ TL+ G+ +A     A+ + + M + GVHP   T+
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453

Query: 497 LLLAEARRATGLTKEAK 513
             L +     GL K  K
Sbjct: 454 NTLLD-----GLCKNGK 465



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 160/323 (49%), Gaps = 1/323 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L   G+  +A  + ++++E    P++VT+ +L+ A   + +      +  
Sbjct: 275 VFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 334

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +  +DP+ + +N++IN F     ++EA   F  M      P   TYNTLI G+  A 
Sbjct: 335 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAK 394

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  + ++L   MSR G V  N  TY  L+  +    +   A  V  +M + G+ P+++TY
Sbjct: 395 KVVDGMELFRDMSRRGLV-GNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+     +NG+ ++A  V   ++ + ++P+  T  I+  G CK GK+++      ++  
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P+++ +N +I GF +   ++    +   MKE    PD  TY+T++ A    G    
Sbjct: 514 KGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAA 573

Query: 372 CKEIFDDMGKAGIKPDAHAYSIL 394
             E+  +M       DA  Y ++
Sbjct: 574 SAELIKEMRSCRFAGDASTYGLV 596



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/278 (25%), Positives = 133/278 (47%), Gaps = 27/278 (9%)

Query: 55  QPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL 114
           + Q   +  ++K+    V +   L+N   +  K  +   +F ++   G   + VTYTTL+
Sbjct: 363 EAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLI 422

Query: 115 AALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT 174
                    ++   +  Q+  +G+ P+ + +N +++   ++G +E+AM  F  +++S + 
Sbjct: 423 HGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKME 482

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P   TYN + +G   AGK E+   L   +S +G VKP++  YN ++  +C +    EA+ 
Sbjct: 483 PDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG-VKPDVIAYNTMISGFCKKGLKEEAYT 541

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           +  KM   G  PD  TYNT+  A+ ++G+   + E+I EM         R+C        
Sbjct: 542 LFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEM---------RSC-------- 584

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
                    RFA     YG+  +++    L KGF+E++
Sbjct: 585 ---------RFAGDASTYGLVTDMLHDGRLDKGFLEVL 613


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 212/429 (49%), Gaps = 2/429 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +  K++++L +RG   EA  +   +I+ G   +L TY   +  L    R      ++  +
Sbjct: 191 AFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAGRLPEAVRLVDGM 250

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
               + PD + +N +I    +    +EAM    +M   G  P   TYNT+I GY      
Sbjct: 251 RAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMV 309

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+ +LL     +G V P+  TY  L+   C E ++  A  + ++  A G+KPD+V YN+
Sbjct: 310 QEATELLKDAVFKGFV-PDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNS 368

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +       G    A +V+ EM   G  P+ +T  I+I+G CK G I +A          G
Sbjct: 369 LVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKG 428

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P++  FN LI G+ + +  D   +++  M E+ + PD ITY++++N    AG +++  
Sbjct: 429 YLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVN 488

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E F +M   G  P+   Y+IL + + R  + E+A ++++ M + G HP+ V F T+I G+
Sbjct: 489 ETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGF 548

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C +G ++ A  +F K+ E G S    TF TL+  +S       AE+I   M + G     
Sbjct: 549 CRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADS 608

Query: 494 STFLLLAEA 502
            T+ +L + 
Sbjct: 609 YTYRVLIDG 617



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 208/432 (48%), Gaps = 1/432 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+  L ++  PQEA      ++  G  P   TY T++              ++ 
Sbjct: 258 VVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLK 317

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
                G  PD + + ++IN     G++E A++ F + +  G+ P    YN+L+KG  + G
Sbjct: 318 DAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQG 377

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++++++ M+ EG   P+++TYN+++   C   NI++A  VM+     G  PDV T+
Sbjct: 378 LILHALQVMNEMAEEG-CHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF 436

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   Y +  + D A +++  M   G+ P+  T   +++G CK GK+ E     + M  
Sbjct: 437 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 496

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G HPN + +N+LI+ F      +   +V+  M +  ++PD ++++T++  +   G ++ 
Sbjct: 497 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 556

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F  + + G    A  ++ L   +  +     AE++   M+  G   +   +  +I 
Sbjct: 557 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 616

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C   ++DRA     +M + G  P++ TF  ++   +   + ++A  I+ IM   GV P
Sbjct: 617 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676

Query: 492 QKSTFLLLAEAR 503
           +    +L A+ +
Sbjct: 677 EVVDTILNADKK 688



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 206/451 (45%), Gaps = 6/451 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T  + S     +P  A  +   L   G     V Y T++  L      +    +  
Sbjct: 123 LHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVVCGLYAHGHTHDARQLFD 178

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+    + P+   FN V++A  + G++ EA     K+ + G++    TYN  I+G   AG
Sbjct: 179 QMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGLCEAG 238

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+V+L+D M       P++ TYN L+R  C +    EA + + +M   G  PD  TY
Sbjct: 239 RLPEAVRLVDGM--RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTY 296

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NTI   Y +     +A E++ +    G  P+  T   +I+G C EG ++ AL      + 
Sbjct: 297 NTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQA 356

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P++V++N L+KG           +V+  M E   +PD+ TY+ ++N     G +  
Sbjct: 357 KGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISD 416

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + +D    G  PD   ++ L  GY +  + + A +L+  M E G  P+ + + ++++
Sbjct: 417 ATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLN 476

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G ++   E F +M   G  PN  T+  L+  +  + +   A +++  M   G+HP
Sbjct: 477 GLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHP 536

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              +F  L       G  + A  +  K++ K
Sbjct: 537 DAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 567



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 207/445 (46%), Gaps = 12/445 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M++L++     +A  ++  ++  G  P L T+T  L +  +  R +    ++  +   G
Sbjct: 94  IMDALVDAAYHDQAHKVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG 153

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
               ++ +  V+      G+  +A   F +M  + + P  + +N ++      G   E+ 
Sbjct: 154 ----AVAYCTVVCGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAG 209

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  + + G +  NL TYN+ +R  C    + EA  ++  M A  + PDVVTYNT+   
Sbjct: 210 LLLGKVIQRG-MSINLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRG 267

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +     +A   +  M + G  P+  T   II GYCK   ++EA    +     G  P+
Sbjct: 268 LCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPD 327

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
            V +  LI G     D   V+  L L  E +   + PD++ Y++++      G +    +
Sbjct: 328 QVTYCSLINGLCAEGD---VERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQ 384

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + ++M + G  PD   Y+I+  G  +      A  ++   I  G+ P+V  F T+I G+C
Sbjct: 385 VMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYC 444

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
               +D A+++ ++M E+G++P+  T+ +++ G  +A +     E  Q M   G HP   
Sbjct: 445 KRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPI 504

Query: 495 TFLLLAEARRATGLTKEAKRILSKI 519
           T+ +L E    +   +EA +++ K+
Sbjct: 505 TYNILIENFCRSNKMEEASKVIVKM 529



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 165/361 (45%), Gaps = 8/361 (2%)

Query: 138 MDPDSI--FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           + P +I   + A I A++ +G + +A+D F +M      P    YN ++     A   ++
Sbjct: 47  LSPATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQ 106

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + K+   M   G V P+L T+ + +R++C       A  ++  +   G     V Y T+ 
Sbjct: 107 AHKVYVRMLAAG-VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRG----AVAYCTVV 161

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
                +G    A ++  +M H  V PN      ++   CK G + EA      + + G+ 
Sbjct: 162 CGLYAHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMS 221

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            NL  +N+ I+G  E         ++  M+ + V PDV+TY+T++          +    
Sbjct: 222 INLFTYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHY 280

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
              M   G  PD   Y+ +  GY +    ++A ELL   +  GF P+ V + ++I+G C+
Sbjct: 281 LRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCA 340

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G ++RA+E+F++    G+ P++  + +L+ G         A +++  M   G HP   T
Sbjct: 341 EGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQT 400

Query: 496 F 496
           +
Sbjct: 401 Y 401



 Score =  125 bits (313), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 170/350 (48%), Gaps = 8/350 (2%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +E C   +++   ++N L + G   +A  + N+ I  G+ P + T+ TL+     + +
Sbjct: 389 MAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLK 448

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +S   ++ ++ E G+ PD+I +N+V+N   ++G + E  +TF +M   G  P   TYN 
Sbjct: 449 LDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNI 508

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI+ +  + K EE+ K++  MS+EG + P+  ++N L+  +C   ++  A+ +  K+   
Sbjct: 509 LIENFCRSNKMEEASKVIVKMSQEG-LHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEK 567

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G      T+NT+  A++       AE++  EM   G + +  T  ++I G CK   +  A
Sbjct: 568 GYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRA 627

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M + G  P++  F  +I              ++ +M +  V P+V+   TI+NA
Sbjct: 628 YMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVPEVV--DTILNA 685

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
                 +   K + +D+ K G       Y +L +G VR+ +  +   +L+
Sbjct: 686 DKKE--IAAPKILVEDLMKKG-HISYPTYEVLHEG-VRDNKLTRKHRMLL 731


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 237/509 (46%), Gaps = 53/509 (10%)

Query: 68  SCRTVRSMTKLMNSLIERG----KPQEAQAIFNNLIEGG-HKPSLVTYTTLLAALTIQKR 122
           +CRT     +L +S+  R      PQ   AI + L     +  +      L+  L   +R
Sbjct: 46  TCRTANQALELFHSVSRRADLAKNPQLYSAIIHVLTGAKLYAKARCLMRDLIQCLQNSRR 105

Query: 123 FN---SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM----------------- 162
                S+ +++S++E +   P+   F  +I AFSE G +EEA+                 
Sbjct: 106 SRICCSVFNVLSRLESSKFTPN--VFGVLIIAFSEMGLVEEALWVYYKMDVLPAMQACNM 163

Query: 163 -----------DTFWK----MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
                      DT WK    M   G +P   TY TLI G    G   ++ +L D M  E 
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMI-EK 222

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
            + P +  Y +L+R  C E  I+EA ++   M  SGM P++ TYNT+   Y +     +A
Sbjct: 223 KIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKA 282

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
            E+  EM  +G+ PN  T GI+I G CK  ++  A +F   M  +GV PN+ ++N LI G
Sbjct: 283 LELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342

Query: 328 FVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           + +      + E L+L  E     + PDV TYS ++        M++   +  +M K G 
Sbjct: 343 YCK---AGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGF 399

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+A  Y+ L  GY +E   EKA E+   M E G  PN++ F+T+I G+C  G M+ A+ 
Sbjct: 400 LPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMG 459

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           ++ +M   G+ P++  +  L+ G+ +      A  + + M+  G+HP   T   L +   
Sbjct: 460 LYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLC 519

Query: 505 ATGLTKEA-KRILSKIKNK---ERTNEME 529
             G   +A K  L+K        +TNE++
Sbjct: 520 KDGRISDAIKLFLAKTGTDTTGSKTNELD 548



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 216/438 (49%), Gaps = 14/438 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L+++G+      ++ +++  G  P++VTY TL+     Q  F     +  ++ E  
Sbjct: 164 VLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKK 223

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P  + +  +I        + EA   F  M+ SG+ P   TYNT++ GY      ++++
Sbjct: 224 IFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKAL 283

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L   M  +G + PN+ T+ +L+   C    +  A   +  MA+ G+ P++  YN +   
Sbjct: 284 ELYQEMLGDG-LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDG 342

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G   +A  +  E+E + + P+  T  I+I G C   +++EA    + MK+ G  PN
Sbjct: 343 YCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPN 402

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +N LI G+ +  + +   EV + M E  + P++IT+ST+++ +  AG M+    ++ 
Sbjct: 403 AVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYT 462

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G+ PD  AY+ L  G+ ++   ++A  L   M E+G HPNV   + +I G C DG
Sbjct: 463 EMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDG 522

Query: 438 SMDRAIEVF-------------DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +  AI++F             +++     SPN   +  L+ G     + ++A +    M
Sbjct: 523 RISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDM 582

Query: 485 KAFGVHPQKSTFLLLAEA 502
           +  G+ P   T +++ + 
Sbjct: 583 RCSGLRPDVFTCIVIIQG 600



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 188/390 (48%), Gaps = 14/390 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M+   +    ++A  ++  ++  G  P++VT+  L+  L       S    +  +   G
Sbjct: 269 MMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFG 328

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +N +I+ + ++GN+ EA+    ++++  + P   TY+ LIKG     + EE+ 
Sbjct: 329 VVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEAD 388

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M ++G + PN  TYN L+  +C E N+ +A  V  +M   G++P+++T++T+   
Sbjct: 389 GLLQEMKKKGFL-PNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDG 447

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G+ + A  +  EM   G+ P+      +I G+ K+G  KEA R  + M+E G+HPN
Sbjct: 448 YCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPN 507

Query: 318 LVIFNLLIKGFVE----------IMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWS 364
           +   + LI G  +           + + G D   +   E      +P+ + Y+ ++    
Sbjct: 508 VFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLC 567

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
           T G + K  + F DM  +G++PD     ++ +G+ R         L   +++ G  PN  
Sbjct: 568 TDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSS 627

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
           ++  +  G+   G +  A+   + +   G+
Sbjct: 628 VYRVLAKGYEESGYLKSALRCSEDLSGIGI 657


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 235/487 (48%), Gaps = 46/487 (9%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSIMSQVEEN 136
           LM+      +P    A+F  ++  G K   +T  TLL  L    R   +++ ++ ++ E 
Sbjct: 163 LMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNVLLHRMSEL 222

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG--LTPTTSTYNTLIKGYGIAGKPE 194
           G  P+++ ++ V+ A  ++   + A+D    M + G   +P    Y+T+I G+   G+  
Sbjct: 223 GCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETG 282

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++  L   M+R+G VKP++ TYN+++ A C  + + +A  V+ +M   G +PD VTY+ +
Sbjct: 283 KACSLFHEMTRQG-VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCM 341

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA-------- 306
              YA  G   +A ++  EM+  G+ PN  TC   ++  CK G+ KEA  F         
Sbjct: 342 IHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGH 401

Query: 307 ---------------------------RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
                                       +MK  G+  N  +F +LI  + +   R  VD+
Sbjct: 402 KPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAK---RGMVDD 458

Query: 340 VLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            + +  E +   V+PDV+TYST+++ +S  G +    E F+ M   GI+P+   YS + +
Sbjct: 459 AMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQ 518

Query: 397 GYVREQEPEKAEELLMTMIESGF-HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
           G+       KA+EL+  MI  G   P++V F+++I+  C DG +  A ++FD   + G  
Sbjct: 519 GFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGER 578

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P + TF +L+ GY    +  +A +IL  M+  GV P   T+  L +     G   +   +
Sbjct: 579 PGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTL 638

Query: 516 LSKIKNK 522
             +++ K
Sbjct: 639 FREMQRK 645



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 112/495 (22%), Positives = 218/495 (44%), Gaps = 70/495 (14%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + +++     G+  +A ++F+ +   G KP +VTY  ++ AL   +  +    ++ 
Sbjct: 265 VVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLR 324

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+  +G  PD++ ++ +I+ ++  G ++EA   F +MK+ GL P   T N+ +      G
Sbjct: 325 QMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHG 384

Query: 192 KPEESVKLLDLMSREGN----------------------------------VKPNLRTYN 217
           + +E+ +  D M+ +G+                                  +  N   + 
Sbjct: 385 RSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFT 444

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +L+ A+     + +A  +  +M   G+ PDVVTY+T+ + +++ G    A E   +M   
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVAR 504

Query: 278 GVQPNGRTCGIIISGYC------------------------------------KEGKIKE 301
           G+QPN      II G+C                                    K+G++ +
Sbjct: 505 GIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMD 564

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A        + G  P ++ FN LI G+  +   D   ++L  M+   V PD++TY+T+++
Sbjct: 565 AHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLD 624

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +   G ++    +F +M + G+KP+   Y I+  G  R      A +    MIESG   
Sbjct: 625 GYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTV 684

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            V I+  I+ G C +   D AI +F K+    V  ++    T++    + ++   A+E+ 
Sbjct: 685 TVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELF 744

Query: 482 QIMKAFGVHPQKSTF 496
             + A G+ P +ST+
Sbjct: 745 ATISASGLLPNESTY 759



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 209/445 (46%), Gaps = 6/445 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIE--GGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           S + ++ +L +    Q A  +   + +  G   P +V Y+T++     +       S+  
Sbjct: 230 SYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIHGFFNEGETGKACSLFH 289

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD + +N +I+A  ++  M++A     +M   G  P T TY+ +I GY   G
Sbjct: 290 EMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLG 349

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+ K+   M + G + PN+ T N  + + C      EA      M A G KPD+ +Y
Sbjct: 350 RLKEAAKMFREMKKRGLI-PNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSY 408

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   YA  G       +   M+ NG+  N     I+I  Y K G + +A+     M++
Sbjct: 409 CTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQ 468

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P++V ++ +I  F  +       E    M    + P+   YS+I+  +   G + K
Sbjct: 469 QGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVK 528

Query: 372 CKEIFDDMGKAGI-KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
            KE+  +M   GI +PD   +S +     ++     A ++     + G  P V+ F ++I
Sbjct: 529 AKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLI 588

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+C  G MD+A ++ D M   GV P++ T+ TL+ GY +  +      + + M+  GV 
Sbjct: 589 DGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVK 648

Query: 491 PQKSTF-LLLAEARRATGLTKEAKR 514
           P   T+ ++LA   RA G T  A++
Sbjct: 649 PNTVTYGIMLAGLFRA-GRTVAARK 672



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 114/473 (24%), Positives = 210/473 (44%), Gaps = 57/473 (12%)

Query: 41  EKKQLYSNSKPTD-SQPQTHCSFCMN---------KESCRTVRSMTK------------L 78
           +K +L      TD +QP T    CM          KE+ +  R M K             
Sbjct: 317 DKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSF 376

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK-------RFNSIHS--- 128
           + SL + G+ +EA   F+++   GHKP + +Y TLL     +         FNS+ S   
Sbjct: 377 LASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGI 436

Query: 129 -------------------------IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
                                    I +++++ G+ PD + ++ VI+ FS  G + +AM+
Sbjct: 437 AANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAME 496

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
            F +M   G+ P T+ Y+++I+G+ + G   ++ +L+  M  +G  +P++  ++ ++ + 
Sbjct: 497 KFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSL 556

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C +  + +A ++       G +P V+T+N++   Y   G+ D+A +++  ME  GV+P+ 
Sbjct: 557 CKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDI 616

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T   ++ GY K G+I + L   R M+  GV PN V + +++ G           +    
Sbjct: 617 VTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHE 676

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M E      V  Y  I+         D+   +F  +G   +K      + +     + Q 
Sbjct: 677 MIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQR 736

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
            E+A+EL  T+  SG  PN   +  +I     DG ++ A  +F  M + G+ P
Sbjct: 737 KEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVP 789



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 183/386 (47%), Gaps = 4/386 (1%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK- 198
           P    +N +++    +   +  +  F  +  +GL     T NTL+K    A + EE+V  
Sbjct: 155 PTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAVNV 214

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG--MKPDVVTYNTIAT 256
           LL  MS  G V PN  +Y+++++A C+      A +++  MA  G    PDVV Y+T+  
Sbjct: 215 LLHRMSELGCV-PNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVIH 273

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            +   GE  +A  +  EM   GV+P+  T  +II   CK   + +A    R M   G  P
Sbjct: 274 GFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQP 333

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           + V ++ +I G+  +       ++   MK+  + P+++T ++ + +    G   +  E F
Sbjct: 334 DTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFF 393

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           D M   G KPD  +Y  L  GY  E        L  +M  +G   N  +FT +I  +   
Sbjct: 394 DSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKR 453

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +D A+ +F +M + GVSP++ T+ T++  +S   +   A E    M A G+ P  + +
Sbjct: 454 GMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVY 513

Query: 497 LLLAEARRATGLTKEAKRILSKIKNK 522
             + +     G   +AK ++S++ NK
Sbjct: 514 SSIIQGFCMHGGLVKAKELVSEMINK 539



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/292 (21%), Positives = 142/292 (48%), Gaps = 1/292 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + ++NSL + G+  +A  IF+   + G +P ++T+ +L+    +  + +    I+  +E 
Sbjct: 550 SSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEV 609

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++PD + +N +++ + ++G + + +  F +M+  G+ P T TY  ++ G   AG+   
Sbjct: 610 VGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVA 669

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + K    M   G     +  Y +++   C      EA  +  K+    +K  +   NT+ 
Sbjct: 670 ARKKFHEMIESGTT-VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMI 728

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            A  +    ++A+E+   +  +G+ PN  T G++I    K+G +++A     +M++ G+ 
Sbjct: 729 NAMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIV 788

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
           P   + N +I+  +E  +       L+ +   R+  +  T S +++ +S  G
Sbjct: 789 PGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKG 840



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 109/265 (41%), Gaps = 40/265 (15%)

Query: 80  NSLIER----GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           NSLI+     GK  +A  I + +   G +P +VTY TLL       R N   ++  +++ 
Sbjct: 585 NSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQR 644

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY--------------- 180
            G+ P+++ +  ++     +G    A   F +M ESG T T S Y               
Sbjct: 645 KGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADE 704

Query: 181 --------------------NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
                               NT+I       + EE+ +L   +S  G + PN  TY V++
Sbjct: 705 AIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASG-LLPNESTYGVMI 763

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
                +  + +A N+   M  SG+ P     N I     + GE  +A   + +++   + 
Sbjct: 764 INLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRIL 823

Query: 281 PNGRTCGIIISGYCKEGKIKEALRF 305
               T  +++S + ++GK +E ++ 
Sbjct: 824 LEASTTSLMLSLFSRKGKYQEDIKL 848


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/528 (25%), Positives = 250/528 (47%), Gaps = 45/528 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V+S   +MN L+E G   +A  ++  + + G  P + T+T  + +  I  R  +   ++
Sbjct: 110 SVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLL 169

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + +   G + +++ + AVI+ F +     EA   F +M + G+ P   T+N LI      
Sbjct: 170 NNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKK 229

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +ES KL   + + G V PNL T+N+ ++  C +  I EA  ++  + + G+ PDV++
Sbjct: 230 GNVQESEKLFSKVMKRG-VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVIS 288

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+   + ++ +  +AE  + +M ++GV+PN  T   II+G+CK G ++ A +  R   
Sbjct: 289 YNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAM 348

Query: 311 EYGVHPNLVIFNLLIKG-------------FVEIMDRDG-------------------VD 338
             G  P+   ++ LI G             F E M++                     V 
Sbjct: 349 FKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVL 408

Query: 339 EVLALMK---EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
           + L LMK   E   +PD+ TY+ ++N     G +     I +D    G  PD   ++ L 
Sbjct: 409 QALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLI 468

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            GY +++  +KA E+L TM+  G  P+V+ + T+++G C    +D  ++ F  M E G +
Sbjct: 469 DGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCT 528

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           PN+ T+  L+  + + R+   A E+ + MK  G+ P   T   L     + G   +A  +
Sbjct: 529 PNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYEL 588

Query: 516 LSKIKNKERTNEMEAEEDIPVESL---------ERLYHKEATTASYPN 554
              I+ + + +   A  +I + +          E+L+HK   +   P+
Sbjct: 589 FVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPD 636



 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 220/440 (50%), Gaps = 2/440 (0%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C  + +  KL++ L ++G  QE++ +F+ +++ G  P+L T+   +  L  +   +    
Sbjct: 213 CPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAAR 272

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++  +   G+ PD I +N +I  F +   + EA     KM  SG+ P   TYNT+I G+ 
Sbjct: 273 LLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFC 332

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            AG  + + K+L     +G + P+  TY+ L+   CN+ ++  A  V ++    G K  +
Sbjct: 333 KAGMMQNADKILRDAMFKGFI-PDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSI 391

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           + YNT+    ++ G   QA +++ +M  +G  P+  T  ++++G CK G + +A      
Sbjct: 392 ILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILND 451

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
               G  P++  FN LI G+ +  + D   E+L  M    + PDVITY+T++N    A  
Sbjct: 452 AIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARK 511

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D   + F  M + G  P+   Y+IL + + ++++  +A EL   M   G  P++V   T
Sbjct: 512 LDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCT 571

Query: 429 IISGWCSDGSMDRAIEVFDKM-CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +I G CS+G +D+A E+F  +  E+  S +   F  ++  + E      AE++   M   
Sbjct: 572 LICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGS 631

Query: 488 GVHPQKSTFLLLAEARRATG 507
              P   T+ ++ ++   TG
Sbjct: 632 DCAPDNYTYRVMIDSYCKTG 651



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 125/510 (24%), Positives = 225/510 (44%), Gaps = 77/510 (15%)

Query: 85  RGKPQEAQAIFNNL-IEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN------- 136
           +  P  A  +FN +  E G K +L TY  ++  L +  +F ++  +++++ +N       
Sbjct: 17  QNDPLNALKMFNQVKTEDGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLE 76

Query: 137 -----------------------------GMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
                                          +P    +NA++N   E G   +A   + +
Sbjct: 77  GVYIGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMR 136

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           MK+ G+ P   T+   +K + I G+P  +++LL+ M  +G  + N  +Y  ++  +  E 
Sbjct: 137 MKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQG-CEFNAVSYCAVISGFYKEN 195

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
              EA+++  +M   G+ PD++T+N +     + G   ++E++  ++   GV PN  T  
Sbjct: 196 CQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFN 255

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           I I G C++G I EA R   ++   G+ P+++ +N LI GF +       +  L  M   
Sbjct: 256 IFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNS 315

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            V P+  TY+TI+N +  AG M    +I  D    G  PD   YS L  G   + +  +A
Sbjct: 316 GVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRA 375

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS------------ 455
             +    +E GF  +++++ T++ G    G + +A+++   M EHG S            
Sbjct: 376 MAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNG 435

Query: 456 -----------------------PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
                                  P++ TF TL+ GY + R   +A EIL  M + G+ P 
Sbjct: 436 LCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPD 495

Query: 493 KSTF--LL--LAEARRATGLTKEAKRILSK 518
             T+  LL  L +AR+   +    K +L K
Sbjct: 496 VITYNTLLNGLCKARKLDNVVDTFKAMLEK 525



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/515 (21%), Positives = 221/515 (42%), Gaps = 57/515 (11%)

Query: 32  IPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEA 91
           +  KK N  E ++L+S                M +  C  + +    +  L  +G   EA
Sbjct: 225 VLCKKGNVQESEKLFSKV--------------MKRGVCPNLFTFNIFIQGLCRKGAIDEA 270

Query: 92  QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINA 151
             +  +++  G  P +++Y TL+       +       + ++  +G++P+   +N +IN 
Sbjct: 271 ARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIING 330

Query: 152 FSES-----------------------------------GNMEEAMDTFWKMKESGLTPT 176
           F ++                                   G+M  AM  F++  E G   +
Sbjct: 331 FCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHS 390

Query: 177 TSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
              YNTL+KG    G   ++++L+  M   G   P++ TYN++V   C    +++A  ++
Sbjct: 391 IILYNTLVKGLSKQGLVLQALQLMKDMMEHG-CSPDIWTYNLVVNGLCKMGCLSDANGIL 449

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
           +   A G  PD+ T+NT+   Y +    D+A E++  M  +G+ P+  T   +++G CK 
Sbjct: 450 NDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKA 509

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDV 353
            K+   +   + M E G  PN++ +N+LI+ F +  DR  V E + L KE +   + PD+
Sbjct: 510 RKLDNVVDTFKAMLEKGCTPNIITYNILIESFCK--DRK-VSEAMELFKEMKTRGLTPDI 566

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKA-GIKPDAHAYSILAKGYVREQEPEKAEELLM 412
           +T  T++    + G +DK  E+F  + K          ++I+   +  +     AE+L  
Sbjct: 567 VTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFH 626

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M  S   P+   +  +I  +C  G++D A     +    G+ P+  T   ++       
Sbjct: 627 KMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTH 686

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           +   A  I+ +M   G+ P++   +  A+ +    
Sbjct: 687 RLSEAVVIINLMVQNGIVPEEVNSIFEADKKEVAA 721



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/352 (22%), Positives = 138/352 (39%), Gaps = 48/352 (13%)

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN--GVQPNGRTCGIIISGYCKEGKI 299
            G K  + TY  +      +G+ +  E+V+ EM  N       G   GI+   Y ++GK+
Sbjct: 34  DGFKHTLETYKCMIEKLGLHGKFEAMEDVLAEMRKNVDSKMLEGVYIGIM-RDYGRKGKV 92

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
           +EA                          V + +R         M  +   P V +Y+ I
Sbjct: 93  QEA--------------------------VNVFER---------MDFYDCEPSVQSYNAI 117

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           MN     G+  +  +++  M   GI PD + ++I  K +     P  A  LL  M   G 
Sbjct: 118 MNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGC 177

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
             N V +  +ISG+  +     A  +FD+M + G+ P++ TF  L+    +      +E+
Sbjct: 178 EFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEK 237

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI----- 534
           +   +   GV P   TF +  +     G   EA R+L  I ++  T ++ +   +     
Sbjct: 238 LFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFC 297

Query: 535 ---PVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDA 583
               +   E   HK   +   PN      +++   K  A  ++    +LRDA
Sbjct: 298 KHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCK--AGMMQNADKILRDA 347


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 227/445 (51%), Gaps = 3/445 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++ L    K  EA A+ + +++ G +P LVTY T++  L  +   +   S++ ++
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKM 249

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+  ++ D + +N +I+   +  +M++A++ F +M   G+ P   TY++LI      G+ 
Sbjct: 250 EKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRW 309

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            ++ +LL D++ R+  + PN+ T++ L+ A+  E  + EA  +  +M    + PD+ TY+
Sbjct: 310 SDASRLLSDMIERK--INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 367

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++   +  +   D+A+ +   M      PN  T   +I G+CK  +++E +   R M + 
Sbjct: 368 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQR 427

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+  N V +  LI GF +  D D    V   M    V+P+++TY+ +++     G + K 
Sbjct: 428 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKA 487

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             +F+ + ++ ++PD + Y+I+ +G  +  + E   EL   +   G  PNV+ + T+ISG
Sbjct: 488 MVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISG 547

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C  GS + A  +  KM E G  PN  T+ TL+           + E+++ M++ G    
Sbjct: 548 FCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGD 607

Query: 493 KSTFLLLAEARRATGLTKEAKRILS 517
            ST  L+        L K    +LS
Sbjct: 608 ASTIGLVTNMLHDGRLDKSFLDMLS 632



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 219/436 (50%), Gaps = 6/436 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L N L +  K  +A  +F ++++    PS+V +  LL+A+    +F  + S+  Q++  G
Sbjct: 54  LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   ++  IN F     +  A+    KM + G  P   T ++L+ GY  + +  ++V
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L+D M   G  KP+  T+  L+         +EA  ++ +M   G +PD+VTY T+   
Sbjct: 174 ALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+ D A  ++ +ME   ++ +      II G CK   + +AL     M   G+ P+
Sbjct: 233 LCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPD 292

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  ++ LI              +L+ M E ++NP+V+T+S +++A+   G + + ++++D
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K  I PD   YS L  G+      ++A+ +   MI     PNVV ++T+I G+C   
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++  +E+F +M + G+  N  T+ TL+ G+ +AR    A+ + + M + GVHP   T+ 
Sbjct: 413 RVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYN 472

Query: 498 LLAEARRATGLTKEAK 513
           +L +     GL K  K
Sbjct: 473 ILLD-----GLCKNGK 483



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 224/450 (49%), Gaps = 1/450 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +++ L+N      +  +A A+ + ++E G+KP   T+TTL+  L +  + +   +++ 
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVD 212

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G  PD + +  V+N   + G+++ A+    KM++  +      YNT+I G     
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK 272

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++++ L   M  +G ++P++ TY+ L+   CN    ++A  ++  M    + P+VVT+
Sbjct: 273 HMDDALNLFTEMDNKG-IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTF 331

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  A+ + G+  +AE++  EM    + P+  T   +I+G+C   ++ EA      M  
Sbjct: 332 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 391

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
               PN+V ++ LIKGF +    +   E+   M +  +  + +TY+T+++ +  A   D 
Sbjct: 392 KDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDN 451

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            + +F  M   G+ P+   Y+IL  G  +  +  KA  +   +  S   P++  +  +I 
Sbjct: 452 AQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIE 511

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G ++   E+F  +   GVSPN+  + T++ G+        A+ +L+ MK  G  P
Sbjct: 512 GMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLP 571

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKN 521
              T+  L  AR   G  + +  ++ ++++
Sbjct: 572 NSGTYNTLIRARLRDGDREASAELIKEMRS 601



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 219/444 (49%), Gaps = 3/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            +N    R +   A A+   +++ G++P +VT ++LL      KR +   +++ Q+ E G
Sbjct: 124 FINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 183

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD+  F  +I+         EA+    +M + G  P   TY T++ G    G  + ++
Sbjct: 184 YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLAL 243

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M + G ++ ++  YN ++   C  K++ +A N+  +M   G++PDV TY+++ + 
Sbjct: 244 SLLKKMEK-GKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G    A  ++ +M    + PN  T   +I  + KEGK+ EA +    M +  + P+
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +  ++ LI GF  + DR D    +  LM      P+V+TYST++  +  A  +++  E+F
Sbjct: 363 IFTYSSLINGFC-MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELF 421

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M + G+  +   Y+ L  G+ + ++ + A+ +   M+  G HPN++ +  ++ G C +
Sbjct: 422 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKN 481

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G + +A+ VF+ +    + P++ T+  ++ G  +A +     E+   +   GV P    +
Sbjct: 482 GKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAY 541

Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
             +       G  +EA  +L K+K
Sbjct: 542 NTMISGFCRKGSKEEADSLLKKMK 565



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 217/437 (49%), Gaps = 1/437 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++    KL++++ +  K +   ++   +   G    L TY+  +     + + +   +++
Sbjct: 82  SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++ + G +PD +  ++++N +  S  + +A+    +M E G  P T T+ TLI G  + 
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K  E+V L+D M + G  +P+L TY  +V   C   +I  A +++ KM    ++ DVV 
Sbjct: 202 NKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVI 260

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNTI     +    D A  +  EM++ G++P+  T   +IS  C  G+  +A R    M 
Sbjct: 261 YNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMI 320

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E  ++PN+V F+ LI  FV+       +++   M +  ++PD+ TYS+++N +     +D
Sbjct: 321 ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 380

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + K +F+ M      P+   YS L KG+ + +  E+  EL   M + G   N V +TT+I
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLI 440

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+      D A  VF +M   GV PN+ T+  L+ G  +  +  +A  + + ++   + 
Sbjct: 441 HGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTME 500

Query: 491 PQKSTFLLLAEARRATG 507
           P   T+ ++ E     G
Sbjct: 501 PDIYTYNIMIEGMCKAG 517



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/323 (26%), Positives = 162/323 (50%), Gaps = 1/323 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L   G+  +A  + +++IE    P++VT++ L+ A   + +      +  
Sbjct: 293 VFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 352

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +  +DPD   ++++IN F     ++EA   F  M      P   TY+TLIKG+  A 
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAK 412

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE ++L   MS+ G V  N  TY  L+  +   ++   A  V  +M + G+ P+++TY
Sbjct: 413 RVEEGMELFREMSQRGLVG-NTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTY 471

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     +NG+  +A  V   ++ + ++P+  T  I+I G CK GK+++       +  
Sbjct: 472 NILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSL 531

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV PN++ +N +I GF     ++  D +L  MKE    P+  TY+T++ A    G  + 
Sbjct: 532 KGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREA 591

Query: 372 CKEIFDDMGKAGIKPDAHAYSIL 394
             E+  +M   G   DA    ++
Sbjct: 592 SAELIKEMRSCGFAGDASTIGLV 614



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 74/316 (23%), Positives = 136/316 (43%), Gaps = 6/316 (1%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P++  +N L+ A           ++  +M   G+  D+ TY+     + +  +   A  V
Sbjct: 81  PSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAV 140

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + +M   G +P+  T   +++GYC   +I +A+     M E G  P+   F  LI G   
Sbjct: 141 LAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHG--- 197

Query: 331 IMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           +   +   E +AL   M +    PD++TY T++N     G +D    +   M K  I+ D
Sbjct: 198 LFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEAD 257

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ +  G  + +  + A  L   M   G  P+V  ++++IS  C+ G    A  +  
Sbjct: 258 VVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLS 317

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            M E  ++PN+ TF  L+  + +  +   AE++   M    + P   T+  L        
Sbjct: 318 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 377

Query: 508 LTKEAKRILSKIKNKE 523
              EAK +   + +K+
Sbjct: 378 RLDEAKHMFELMISKD 393



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 118/226 (52%), Gaps = 1/226 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ++K+    V + + L+    +  + +E   +F  + + G   + VTYTTL+      +  
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           ++   +  Q+   G+ P+ + +N +++   ++G + +AM  F  ++ S + P   TYN +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I+G   AGK E+  +L   +S +G V PN+  YN ++  +C + +  EA +++ KM   G
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKG-VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDG 568

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
             P+  TYNT+  A  ++G+ + + E+I EM   G   +  T G++
Sbjct: 569 PLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 136/464 (29%), Positives = 232/464 (50%), Gaps = 14/464 (3%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M KE C     + + L+N L   G+  EA  +   +IE G +P++ TYT  + AL   + 
Sbjct: 259 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEH 318

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +++++++ G  P+   + A+I+  S  G +E A+  + KM + GL P T TYN 
Sbjct: 319 EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNA 378

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI    + G+   ++K+   M   G++  N +TYN +++  C   +I +A  +  KM   
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSL-ANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM 437

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P VVTYNT+   Y   G  + A  ++  M+ NG +P+  T   ++SG+ K GK++ A
Sbjct: 438 GPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESA 497

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMK---EFRVNPDVITYST 358
             + + M E G++PN V +  LI G      +DG VD  L+L+K   E   NP+V +Y+ 
Sbjct: 498 SFYFQEMVECGLNPNPVSYTALIDGH----SKDGKVDIALSLLKRMEEMGCNPNVESYNA 553

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++N  S      + ++I D M + G+ P+   Y+ L  G  R    + A ++   M +  
Sbjct: 554 VINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 613

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PN+  ++++I G C +G  D A    ++M E G  P L T+ TL+ G     + + AE
Sbjct: 614 CLPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAE 669

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           ++++ MK  G  P +  +  L  A         A +I   I+ K
Sbjct: 670 QLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAK 713



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 218/445 (48%), Gaps = 1/445 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   L+N L ++GK +EA+ I + + +    P + TYT+L+      +  +    + 
Sbjct: 197 SLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVF 256

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G DP+S+ ++ +IN     G ++EA+D   +M E G+ PT  TY   I      
Sbjct: 257 DRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAI 316

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              EE+++L+  M + G  +PN++TY  L+        +  A  + HKM   G+ P+ VT
Sbjct: 317 EHEEEAIELVARMKKRG-CRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 375

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +       G    A ++   ME +G   N +T   II G C  G I++A+     M 
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G  P +V +N LI G++   + +    +L LMKE    PD  TY+ +++ +S  G ++
Sbjct: 436 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                F +M + G+ P+  +Y+ L  G+ ++ + + A  LL  M E G +PNV  +  +I
Sbjct: 496 SASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI 555

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G   +     A ++ DKM E G+ PN+ T+ TL+ G     +   A +I   M+     
Sbjct: 556 NGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 615

Query: 491 PQKSTFLLLAEARRATGLTKEAKRI 515
           P   T+  L       G   EA+R+
Sbjct: 616 PNLYTYSSLIYGLCQEGKADEAERM 640



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 232/499 (46%), Gaps = 41/499 (8%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  CR  V++ T L++ L   GK + A  +++ +++ G  P+ VTY  L+  L +  R
Sbjct: 329 MKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGR 388

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F++   I   +E +G   ++  +N +I      G++E+AM  F KM + G  PT  TYNT
Sbjct: 389 FSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNT 448

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY   G    + +LLDLM +E   +P+  TYN LV  +     +  A     +M   
Sbjct: 449 LINGYLTKGNVNNAARLLDLM-KENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVEC 507

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P+ V+Y  +   ++++G+ D A  ++  ME  G  PN  +   +I+G  KE +  EA
Sbjct: 508 GLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEA 567

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
            +    M E G+ PN++ +  LI G           ++   M++ +  P++ TYS+++  
Sbjct: 568 EKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYG 627

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G  D+ +     M + G +P    YS L  G  R+    +AE+L+  M E GF P+
Sbjct: 628 LCQEGKADEAER----MSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPD 683

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ--------- 473
             I+ +++   C +  +D A+++F  +   G   +L  +  L+    +A Q         
Sbjct: 684 REIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFD 743

Query: 474 -----PWRAEEI---------------------LQIMKAFGVHPQKSTFLLLAEARRATG 507
                 W A+EI                     L IM++    P   T+++L       G
Sbjct: 744 NMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIG 803

Query: 508 LTKEAKRILSKIKNKERTN 526
            + E++ +  K+K  + +N
Sbjct: 804 KSIESEPLADKLKVLKDSN 822



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 222/433 (51%), Gaps = 1/433 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+ ++  ++  G +PSL+T+ TL+  L+ + +      I+SQ+ +  + PD   + ++I 
Sbjct: 182 ARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLIL 241

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
               + N++ A   F +M + G  P + TY+TLI G    G+ +E++ +L+ M  +G ++
Sbjct: 242 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG-IE 300

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P + TY + + A C  ++  EA  ++ +M   G +P+V TY  + +  ++ G+ + A  +
Sbjct: 301 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 360

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             +M   G+ PN  T   +I+  C  G+   AL+    M+ +G   N   +N +IKG   
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 420

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
             D +    +   M +    P V+TY+T++N + T G ++    + D M + G +PD   
Sbjct: 421 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 480

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ L  G+ +  + E A      M+E G +PN V +T +I G   DG +D A+ +  +M 
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E G +PN++++  ++ G S+  +   AE+I   M   G+ P   T+  L +     G T+
Sbjct: 541 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQ 600

Query: 511 EAKRILSKIKNKE 523
            A +I   ++ ++
Sbjct: 601 FAFKIFHDMEKRK 613



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 8/313 (2%)

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           +L + N L+      + +  A N+  +M  SG++P ++T+NT+    ++ G+  +AE ++
Sbjct: 162 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELIL 221

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL-RFARTMKEYGVHPNLVIFNLLIKGFVE 330
            ++    + P+  T   +I G+C+   +  A   F R +KE G  PN V ++ LI G   
Sbjct: 222 SQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKE-GCDPNSVTYSTLING--- 277

Query: 331 IMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           + +   VDE L +++E     + P V TY+  + A       ++  E+   M K G +P+
Sbjct: 278 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 337

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ L  G  R  + E A  L   M++ G  PN V +  +I+  C  G    A+++F 
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 397

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            M  HG   N +T+  ++ G        +A  + + M   G  P   T+  L       G
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 457

Query: 508 LTKEAKRILSKIK 520
               A R+L  +K
Sbjct: 458 NVNNAARLLDLMK 470



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 137/269 (50%)

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + +L+ + R+    P      ++++A  NE+ I    + +++++  G    + + NT+  
Sbjct: 112 ISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLI 171

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
             A+    + A  +  +M ++G+QP+  T   +I+   K+GK++EA      + +Y + P
Sbjct: 172 QLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSP 231

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++  +  LI G     + D    V   M +   +P+ +TYST++N     G +D+  ++ 
Sbjct: 232 DVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDML 291

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M + GI+P  + Y++        +  E+A EL+  M + G  PNV  +T +ISG    
Sbjct: 292 EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL 351

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           G ++ AI ++ KM + G+ PN  T+  L+
Sbjct: 352 GKLEVAIGLYHKMLKEGLVPNTVTYNALI 380



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 106/227 (46%), Gaps = 6/227 (2%)

Query: 288 IIISGYCK-EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
           I++   C+ E +I+    F   +   G   +L   N L+    +    +G   +   M  
Sbjct: 132 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 191

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             + P ++T++T++N  S  G + + + I   + +  + PD   Y+ L  G+ R +  + 
Sbjct: 192 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 251

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  +   M++ G  PN V ++T+I+G C++G +D A+++ ++M E G+ P + T+   + 
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 311

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
                     A E++  MK  G  P   T+  L      +GL++  K
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL-----ISGLSRLGK 353


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 119/490 (24%), Positives = 243/490 (49%), Gaps = 2/490 (0%)

Query: 32  IPAKKNNPGEKKQLYS-NSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQE 90
           I +K  +   +  LYS NS  + S   + C FC ++ +        +++ + I   K  +
Sbjct: 5   ISSKAKSFLHRNLLYSGNSGTSPSSSFSICGFCFSRRAYSNGSDYREMLRNGIRFMKLDD 64

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           +  +F ++++    PS+  ++ LL+A++  K+++ +  +  Q++  G+  +    N ++N
Sbjct: 65  SLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLN 124

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            F     +  A+    KM + G  P+  T+ +L+ G+    +  +++ + D M   G  K
Sbjct: 125 CFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG-YK 183

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN+  YN ++   C  K +  A +++++M   G+ PDVVTYN++ +    +G    A  +
Sbjct: 184 PNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRM 243

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +  M    + P+  T   +I    KEG++ EA  F   M    + P++V ++LLI G   
Sbjct: 244 VSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCM 303

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
               D  +E+   M      PDV+TYS ++N +  +  ++   ++F +M + G+  +   
Sbjct: 304 YSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+IL +GY R  +   AEE+   M+  G HPN++ +  ++ G C +G +++A+ +   M 
Sbjct: 364 YTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQ 423

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           ++G+  ++ T+  ++ G  +A +   A +I   +   G+ P   T+  +       GL +
Sbjct: 424 KNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRR 483

Query: 511 EAKRILSKIK 520
           EA  +  K+K
Sbjct: 484 EADALFRKMK 493



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 191/380 (50%), Gaps = 1/380 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N      +   A +    +I+ GH+PS+VT+ +LL       R      +  Q+   G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + +N +I+   +S  ++ A+D   +M++ G+ P   TYN+LI G   +G+  ++ 
Sbjct: 182 YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDAT 241

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +++  M++   + P++ T+N L+ A   E  ++EA     +M    + PD+VTY+ +   
Sbjct: 242 RMVSCMTKR-EIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYG 300

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                  D+AEE+   M   G  P+  T  I+I+GYCK  K++  ++    M + GV  N
Sbjct: 301 LCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRN 360

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V + +LI+G+      +  +E+   M    V+P++ITY+ +++     G ++K   I  
Sbjct: 361 TVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILA 420

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM K G+  D   Y+I+ +G  +  E   A ++  ++   G  P++  +TT++ G    G
Sbjct: 421 DMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKG 480

Query: 438 SMDRAIEVFDKMCEHGVSPN 457
               A  +F KM E G+ PN
Sbjct: 481 LRREADALFRKMKEDGILPN 500



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/200 (23%), Positives = 97/200 (48%)

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           +++  +  M  D   ++   M + R  P +  +S +++A S     D    +++ M   G
Sbjct: 52  MLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLG 111

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           I  +    +IL   + R  +   A   L  MI+ G  P++V F ++++G+C    +  A+
Sbjct: 112 IPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDAL 171

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
            +FD+M   G  PN+  + T++ G  +++Q   A ++L  M+  G+ P   T+  L    
Sbjct: 172 YMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGL 231

Query: 504 RATGLTKEAKRILSKIKNKE 523
            ++G   +A R++S +  +E
Sbjct: 232 CSSGRWSDATRMVSCMTKRE 251



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 75/167 (44%), Gaps = 2/167 (1%)

Query: 46  YSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKP 105
           Y  SK  +   +  C     +   R   + T L+      GK   A+ IF  ++  G  P
Sbjct: 336 YCKSKKVEHGMKLFCEM-SQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHP 394

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
           +++TY  LL  L    +      I++ +++NGMD D + +N +I    ++G + +A D +
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIY 454

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
             +   GL P   TY T++ G    G   E+  L   M  +G + PN
Sbjct: 455 CSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDG-ILPN 500


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 197/378 (52%), Gaps = 6/378 (1%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           P+++ +N VI  F   G ++ A+D   +M+E  G+ P   TY T+I G+   G+ +E+VK
Sbjct: 143 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 202

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           + D M  +G VKP    YN L+  +C++  +  A     +M   G+   V TYN +  A 
Sbjct: 203 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 262

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
             +G   +A E++ EM   G+ P+  T  I+I+G+CKEG +K+AL     M   GV   +
Sbjct: 263 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 322

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           V +  LI    +       D++        + PD++ Y+ ++N+ ST+G +D+  EI  +
Sbjct: 323 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 382

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M K  I PD   Y+ L +G       ++A +L+  M E G  P++V + T+ISG+   G 
Sbjct: 383 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 442

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +  A+ + ++M   G +P L T+  L+ G  +  Q   AE +++ M   G+ P  ST++ 
Sbjct: 443 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 502

Query: 499 LAEARRATGLTKEAKRIL 516
           L E     GLT E +R +
Sbjct: 503 LIE-----GLTTEDERAI 515



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 202/394 (51%), Gaps = 7/394 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE-N 136
           ++  L   GKP  A  +   +     +P+ VTY T++A    + R  +   IM ++ E  
Sbjct: 120 MLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 175

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIAGKPEE 195
           G+ P+   +  VI+ + + G ++EA+  F +M   G + P    YN LI GY   GK + 
Sbjct: 176 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 235

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++   D M   G V   + TYN+LV A   +   TEA+ ++ +M   G+ PDV TYN + 
Sbjct: 236 ALLYRDRMVERG-VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 294

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + + G   +A E+   M   GV+    T   +I    K+G+++E  +        G+ 
Sbjct: 295 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR 354

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+LV++N LI       + D   E++  M++ R+ PD +TY+T+M      G +D+ +++
Sbjct: 355 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 414

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            D+M + GI+PD   Y+ L  GY  + + + A  +   M+  GF+P ++ +  +I G C 
Sbjct: 415 IDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 474

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +G  D A  +  +M E+G++P+  T+ +L+ G +
Sbjct: 475 NGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 508



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 183/366 (50%), Gaps = 11/366 (3%)

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A   F  M    L   T+T+N +++    AGKP  +++LL  M R     PN  TYN ++
Sbjct: 98  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNTVI 152

Query: 221 RAWCNEKNITEAWNVMHKMAA-SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG- 278
             +C+   +  A ++M +M    G+ P+  TY T+ + + + G  D+A +V  EM   G 
Sbjct: 153 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 212

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           V+P       +I GYC +GK+  AL +   M E GV   +  +NLL+      MD  G +
Sbjct: 213 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL--FMDGRGTE 270

Query: 339 --EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             E++  M    + PDV TY+ ++N     G + K  EIF++M + G++     Y+ L  
Sbjct: 271 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 330

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
              ++ + ++ ++L    +  G  P++V++  +I+   + G++DRA E+  +M +  ++P
Sbjct: 331 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 390

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +  T+ TLM G     +   A +++  M   G+ P   T+  L       G  K+A RI 
Sbjct: 391 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 450

Query: 517 SKIKNK 522
           +++ NK
Sbjct: 451 NEMMNK 456



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 148/288 (51%), Gaps = 1/288 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+    ++GK   A    + ++E G   ++ TY  L+ AL +  R    + ++ ++   G
Sbjct: 223 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 282

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N +IN   + GN+++A++ F  M   G+  T  TY  LI      G+ +E+ 
Sbjct: 283 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 342

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL D   R G ++P+L  YN L+ +     NI  A+ +M +M    + PD VTYNT+   
Sbjct: 343 KLFDEAVRRG-IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 401

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G  D+A ++I EM   G+QP+  T   +ISGY  +G +K+ALR    M   G +P 
Sbjct: 402 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 461

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
           L+ +N LI+G  +    D  + ++  M E  + PD  TY +++   +T
Sbjct: 462 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 509



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 156/327 (47%), Gaps = 2/327 (0%)

Query: 86  GKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
           G+  EA  +F+ ++  G  KP  V Y  L+     Q + ++      ++ E G+      
Sbjct: 195 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 254

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +N +++A    G   EA +   +M   GL P   TYN LI G+   G  ++++++ + MS
Sbjct: 255 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 314

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G V+  + TY  L+ A   +  + E   +  +    G++PD+V YN +  +++ +G  
Sbjct: 315 RRG-VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 373

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           D+A E++ EME   + P+  T   ++ G C  G++ EA +    M E G+ P+LV +N L
Sbjct: 374 DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTL 433

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G+    D      +   M     NP ++TY+ ++      G  D  + +  +M + GI
Sbjct: 434 ISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 493

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELL 411
            PD   Y  L +G   E E    +E L
Sbjct: 494 TPDDSTYISLIEGLTTEDERAIDDERL 520



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 101/189 (53%), Gaps = 2/189 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M++   R TV + T L+ +L ++G+ QE   +F+  +  G +P LV Y  L+ + +    
Sbjct: 313 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 372

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    IM ++E+  + PD + +N ++      G ++EA     +M E G+ P   TYNT
Sbjct: 373 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 432

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY + G  ++++++ + M  +G   P L TYN L++  C      +A N++ +M  +
Sbjct: 433 LISGYSMKGDVKDALRIRNEMMNKG-FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 491

Query: 243 GMKPDVVTY 251
           G+ PD  TY
Sbjct: 492 GITPDDSTY 500


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 218/430 (50%), Gaps = 1/430 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A A F  ++    +PS+V +   L ++  +K+++++ S+ +Q++  G+  +    N +I
Sbjct: 75  DALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILI 134

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N      ++  A+    KM + G+ P   T+NTLI G  I G+ +E+V L + M R G+ 
Sbjct: 135 NCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGH- 193

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +P++ +Y+ ++   C   N + A  ++ KM   G KP++V Y TI  +  ++   + A +
Sbjct: 194 QPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMD 253

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           ++ EM   G+ P+  T   I+ G+C  G + EA      M    V PN V F +L+ G  
Sbjct: 254 LLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLC 313

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +         V   M +    P+  TY+ +M+ +     MD+ +++ D M   G  P  H
Sbjct: 314 KEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVH 373

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           +Y+IL  GY + +  ++A+ LL+ M E    P+ V ++T++ G C  G    A+ +F +M
Sbjct: 374 SYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEM 433

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
           C  G+ P+L T+ TL+ G  +      A ++L+ M+   + P    + +L E     G  
Sbjct: 434 CSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKL 493

Query: 510 KEAKRILSKI 519
           + AK + SK+
Sbjct: 494 EVAKELFSKL 503



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/431 (27%), Positives = 216/431 (50%), Gaps = 7/431 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L+N     G+ +EA  +FN ++  GH+P +++Y+T++  L      +    ++ ++
Sbjct: 164 TFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKM 223

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           EE G  P+ + +  +I++  +   + +AMD   +M + G+ P   TY+T++ G+   G  
Sbjct: 224 EEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFCSLGHL 283

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+  L + M    NV PN  T+ +LV   C E  ++EA  V   M   G +P+  TYN 
Sbjct: 284 NEATILFNEMVGR-NVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNA 342

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y  N + D+A++V+  M   G  P   +  I+I+GYCK  ++ EA      M E  
Sbjct: 343 LMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKE 402

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMD 370
           + P+ V ++ L++G  ++       E L L KE     + PD++TYST+++     G +D
Sbjct: 403 LTPDTVTYSTLMQGLCQV---GRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLD 459

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  ++   M ++ I+PD   Y+IL +G     + E A+EL   +   G  P +  +T +I
Sbjct: 460 EALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMI 519

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G   +G  D A E+F KM + G  PN  ++  ++ G+ + +    A  ++  M      
Sbjct: 520 KGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFS 579

Query: 491 PQKSTFLLLAE 501
              STF +L +
Sbjct: 580 ADSSTFQMLLD 590



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 111/394 (28%), Positives = 202/394 (51%), Gaps = 1/394 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + ++N L + G    A  +   + E G KP+LV YTT++ +L      N    ++S
Sbjct: 197 VISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLS 256

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G+ PD + ++ +++ F   G++ EA   F +M    + P T T+  L+ G    G
Sbjct: 257 EMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEG 316

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E+  + + M+++G  +PN  TYN L+  +C    + EA  V+  M   G  P V +Y
Sbjct: 317 MVSEARCVFEAMTKKG-AEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSY 375

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y +    D+A+ ++VEM    + P+  T   ++ G C+ G+ +EAL   + M  
Sbjct: 376 NILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCS 435

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P+L+ ++ L+ G  +    D   ++L  M+E ++ PD++ Y+ ++     AG ++ 
Sbjct: 436 SGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEV 495

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            KE+F  +   GI+P    Y+I+ KG ++E   ++A EL   M + GF PN   +  II 
Sbjct: 496 AKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQ 555

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           G+  +     AI + D+M     S +  TF+ L+
Sbjct: 556 GFLQNQDSSTAIRLIDEMVGKRFSADSSTFQMLL 589



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 211/451 (46%), Gaps = 1/451 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S+  L+N L        A ++   + + G +P  +T+ TL+    I+        + +
Sbjct: 127 VYSLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFN 186

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  PD I ++ VIN   +SGN   A+    KM+E G  P    Y T+I       
Sbjct: 187 EMVRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDT 246

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              +++ LL  M   G + P++ TY+ ++  +C+  ++ EA  + ++M    + P+ VT+
Sbjct: 247 LVNDAMDLLSEMVDRG-IPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTF 305

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     + G   +A  V   M   G +PN  T   ++ GYC   ++ EA +    M +
Sbjct: 306 TILVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVD 365

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P +  +N+LI G+ +    D    +L  M E  + PD +TYST+M      G   +
Sbjct: 366 KGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQE 425

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F +M  +G+ PD   YS L  G  +    ++A +LL +M ES   P++V++  +I 
Sbjct: 426 ALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIE 485

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G    G ++ A E+F K+   G+ P ++T+  ++ G  +      A E+ + M+  G  P
Sbjct: 486 GMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLP 545

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              ++ ++ +       +  A R++ ++  K
Sbjct: 546 NSCSYNVIIQGFLQNQDSSTAIRLIDEMVGK 576



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 181/366 (49%), Gaps = 3/366 (0%)

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
           S ++++A+ +F++M      P+   +   +       +    V L + M   G V  N+ 
Sbjct: 70  SISIDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFG-VTHNVY 128

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           + N+L+   C   ++  A +V+ KM   G++PD +T+NT+       GE  +A  +  EM
Sbjct: 129 SLNILINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEM 188

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV-EIMD 333
              G QP+  +   +I+G CK G    AL+  R M+E G  PNLV +  +I     + + 
Sbjct: 189 VRRGHQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLV 248

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            D +D +L+ M +  + PDV+TYSTI++ + + G +++   +F++M    + P+   ++I
Sbjct: 249 NDAMD-LLSEMVDRGIPPDVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTI 307

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L  G  +E    +A  +   M + G  PN   +  ++ G+C +  MD A +V D M + G
Sbjct: 308 LVDGLCKEGMVSEARCVFEAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKG 367

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            +P + ++  L+ GY + R+   A+ +L  M    + P   T+  L +     G  +EA 
Sbjct: 368 CAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEAL 427

Query: 514 RILSKI 519
            +  ++
Sbjct: 428 NLFKEM 433



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/318 (25%), Positives = 149/318 (46%)

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
           N +P++  +   + +   +K  +   ++ ++M   G+  +V + N +     +      A
Sbjct: 87  NPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFA 146

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
             V+ +M   G+QP+  T   +I+G C EG+IKEA+     M   G  P+++ ++ +I G
Sbjct: 147 ISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVING 206

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             +  +     ++L  M+E    P+++ Y+TI+++      ++   ++  +M   GI PD
Sbjct: 207 LCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPD 266

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              YS +  G+       +A  L   M+     PN V FT ++ G C +G +  A  VF+
Sbjct: 267 VVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFE 326

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            M + G  PN  T+  LM GY    Q   A+++L IM   G  P   ++ +L        
Sbjct: 327 AMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRR 386

Query: 508 LTKEAKRILSKIKNKERT 525
              EAK +L ++  KE T
Sbjct: 387 RLDEAKSLLVEMSEKELT 404



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 109/211 (51%), Gaps = 1/211 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ++K     V S   L+N   +R +  EA+++   + E    P  VTY+TL+  L    R 
Sbjct: 364 VDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRP 423

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
               ++  ++  +G+ PD + ++ +++   + G+++EA+     M+ES + P    YN L
Sbjct: 424 QEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNIL 483

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I+G  IAGK E + +L   +  +G ++P +RTY ++++    E    EA+ +  KM   G
Sbjct: 484 IEGMFIAGKLEVAKELFSKLFADG-IQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDG 542

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
             P+  +YN I   + QN ++  A  +I EM
Sbjct: 543 FLPNSCSYNVIIQGFLQNQDSSTAIRLIDEM 573


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 221/438 (50%), Gaps = 1/438 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N+   RG   EA  + + +   G KP L TY  L+  L  +  +     ++ ++   G
Sbjct: 265 LVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVG 324

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P++  FN ++       ++ EA   F +M + G+ P   ++++++  +   G+   ++
Sbjct: 325 LCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRAL 384

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
              + M   G V P+   Y +L+  +C   +++ A  + ++M   G   DVVTYNT+   
Sbjct: 385 AYFEKMKGVGLV-PDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNG 443

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D A+E+  EM   GV P+  T   +I GYCK+G + +AL    TM    + P+
Sbjct: 444 LCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPD 503

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N L+ GF ++ + +   E+   M    + P  I++S ++N + + G + +   ++D
Sbjct: 504 VVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWD 563

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M + GIKP     + + KGY+R     KA + L TMI  G  P+ + + T+I+ +  + 
Sbjct: 564 EMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEE 623

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
           + DRA  + + M E G+ PNL T+  ++ G+S   +   AE +L  M   G++P KST+ 
Sbjct: 624 NFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYT 683

Query: 498 LLAEARRATGLTKEAKRI 515
            L     +    KEA R+
Sbjct: 684 SLINGYVSKDNMKEAFRV 701



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 198/370 (53%), Gaps = 1/370 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           EA+ +FN +++ G  P L+++++++   +         +   +++  G+ PD++ +  +I
Sbjct: 347 EAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDTVIYTILI 406

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N +  + ++  A+    +M E G      TYNTL+ G       +++ +L   M   G V
Sbjct: 407 NGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKEMVERG-V 465

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            P+  T   L+  +C + N+T+A ++   M    +KPDVVTYNT+   + + GE ++A+E
Sbjct: 466 FPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKE 525

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  +M    + P+  +  I+I+G+C  G + EA R    MKE G+ P LV  N +IKG++
Sbjct: 526 LWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYL 585

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
              +    ++ L  M    V PD ITY+T++N++      D+   + ++M + G+ P+  
Sbjct: 586 RAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLV 645

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+ +  G+ R    ++AE +L  MI+ G +P+   +T++I+G+ S  +M  A  V D+M
Sbjct: 646 TYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSKDNMKEAFRVHDEM 705

Query: 450 CEHGVSPNLK 459
            + G  P+ K
Sbjct: 706 LQRGFVPDDK 715



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 205/454 (45%), Gaps = 36/454 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ + ++  K +E    F  L + G   S+     LL A+      +    +     ++G
Sbjct: 160 LIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSG 219

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              +    N ++NA  + G ++       +M+E G+     TYNTL+  Y   G   E+ 
Sbjct: 220 NIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAF 279

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L+D M+ +G +KP L TYN L+   C E +   A  V+ +M   G+ P+  T+N +   
Sbjct: 280 GLVDCMAGKG-LKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVE 338

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +  +  +AE V  EM   GV P+  +   I+  + + G++  AL +   MK  G+ P+
Sbjct: 339 SCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPD 398

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            VI+ +LI G+    D  G  ++   M E     DV+TY+T++N       +D   E+F 
Sbjct: 399 TVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFK 458

Query: 378 DMGKAGI-----------------------------------KPDAHAYSILAKGYVREQ 402
           +M + G+                                   KPD   Y+ L  G+ +  
Sbjct: 459 EMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVG 518

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           E EKA+EL   MI     P+ + F+ +I+G+CS G +  A  ++D+M E G+ P L T  
Sbjct: 519 EMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCN 578

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           T++ GY  A    +A + L  M + GV P   T+
Sbjct: 579 TIIKGYLRAGNLSKANDFLNTMISEGVPPDCITY 612



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 195/418 (46%), Gaps = 42/418 (10%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           + F+ +I  + ++  + E  + F  +++ G   + +  N L+      G  + + K+ + 
Sbjct: 155 VVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYED 214

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
             + GN+  N+ T N++V A C +  +      + +M   G+  D+VTYNT+  AY + G
Sbjct: 215 FVKSGNI-VNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
              +A  ++  M   G++P   T   +I+G CKEG  + A R    M   G+ PN   FN
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 323 LLIKGFVEIMDRDGV---DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            ++   VE   ++ V   + V   M +  V PD+I++S+I+  +S  G + +    F+ M
Sbjct: 334 PML---VESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKM 390

Query: 380 GKAGIKPDAHAYSILAKGYVREQEP----------------------------------- 404
              G+ PD   Y+IL  GY R  +                                    
Sbjct: 391 KGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKML 450

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           + A+EL   M+E G  P+    TT+I G+C DG+M +A+ +F+ M    + P++ T+ TL
Sbjct: 451 DDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTL 510

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           M G+ +  +  +A+E+   M +  + P   +F +L     + GL  EA R+  ++K K
Sbjct: 511 MDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEK 568



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 88/174 (50%), Gaps = 1/174 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + L+N     G   EA  +++ + E G KP+LVT  T++         +  +  ++ +
Sbjct: 541 SFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTM 600

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+ PD I +N +IN+F +  N + A      M+E GL P   TYN ++ G+   G+ 
Sbjct: 601 ISEGVPPDCITYNTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRM 660

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
           +E+  +L  M  +G + P+  TY  L+  + ++ N+ EA+ V  +M   G  PD
Sbjct: 661 QEAEMVLHKMIDKG-INPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 72/139 (51%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   ++   +  G   +A    N +I  G  P  +TY TL+ +   ++ F+    ++
Sbjct: 573 TLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDRAFFLI 632

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + +EE G+ P+ + +NA++  FS  G M+EA     KM + G+ P  STY +LI GY   
Sbjct: 633 NNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLINGYVSK 692

Query: 191 GKPEESVKLLDLMSREGNV 209
              +E+ ++ D M + G V
Sbjct: 693 DNMKEAFRVHDEMLQRGFV 711


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  208 bits (530), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 225/454 (49%), Gaps = 36/454 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L E  + +  ++++N + + G +P +VT  TL+ AL    +  +   ++ ++  + 
Sbjct: 166 LLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHA 225

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   F  ++  F E G++E A+    KM E+G +PT  T N LI GY   G+ E+++
Sbjct: 226 VAPDETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDAL 285

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             +     +G  +P+  TYN  V   C   +++ A  VM  M   G  PDV TYNT+   
Sbjct: 286 GYIQKEIADG-FEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINC 344

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            ++NGE D+A+ ++ +M   G  P+  T   +I   C + +++EAL  AR +   G+ P+
Sbjct: 345 LSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPD 404

Query: 318 LVIFNLLIKGFVEIMD-RDGV-------------DEV------------------LALMK 345
           +  FN+LI    ++ D   G+             DEV                  L L+K
Sbjct: 405 VYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLK 464

Query: 346 EFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
           E   N      +TY+TI++A      +++ +E+FD M   GI   A  ++ L  G  + +
Sbjct: 465 EMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAK 524

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             + A EL+  M++ G  P+ + + +I++ +C  G + +A ++ + M  +G   ++ T+ 
Sbjct: 525 RIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYG 584

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           TL+ G  +A +   A ++L+ M+  G+ P    +
Sbjct: 585 TLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAY 618



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 210/450 (46%), Gaps = 2/450 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T LM   IE G  + A  +   ++E G  P+ VT   L+       R       + + 
Sbjct: 232 TFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKE 291

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G +PD + +N  ++   ++G++  A+     M + G  P   TYNT+I      G+ 
Sbjct: 292 IADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGEL 351

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+  +++ M   G + P+  T+N L+ A C++  + EA ++  ++   G+ PDV T+N 
Sbjct: 352 DEAKGIVNQMVDRGCL-PDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNI 410

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A  + G+      +  EM+ +G  P+  T  I+I   C  GK+  AL   + M+  G
Sbjct: 411 LINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG 470

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              + V +N +I    + M  +  +EV   M    ++   +T++T+++    A  +D   
Sbjct: 471 CPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDAT 530

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+ + M K G++P    Y+ +   Y ++ + +KA ++L TM  +GF  +VV + T+I+G 
Sbjct: 531 ELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGL 590

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G    A+++   M   G+ P  K +  ++           A  + + M   G  P  
Sbjct: 591 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDA 650

Query: 494 STFLLLAEAR-RATGLTKEAKRILSKIKNK 522
            T+ ++     R  G  KEA   L ++ NK
Sbjct: 651 LTYKIVFRGLCRGGGPIKEAFDFLVEMVNK 680



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/476 (22%), Positives = 207/476 (43%), Gaps = 44/476 (9%)

Query: 77  KLMNSLIERGKPQEAQAIFNN-LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           +L+ +L E+  P+ A  + N+ L      PS   Y  ++  L     F+ +  ++ ++  
Sbjct: 58  RLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRR 117

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIAGKPE 194
            G +  +    + + +++     ++A+D    ++   G+   T+ YN L+       + +
Sbjct: 118 EGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMK 177

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
               + + M+  G ++P++ T N L++A C    +  A  ++ +M++  + PD  T+ T+
Sbjct: 178 LLESVYNEMTDRG-IQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTL 236

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              + + G  + A  V  +M   G  P   T  ++I+GYCK G++++AL + +     G 
Sbjct: 237 MQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGF 296

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P+ V +N  +    +        +V+ LM +   +PDV TY+T++N  S  G +D+ K 
Sbjct: 297 EPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKG 356

Query: 375 IFDDMGK-----------------------------------AGIKPDAHAYSILAKGYV 399
           I + M                                      G+ PD + ++IL     
Sbjct: 357 IVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALC 416

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +  +P     L   M  SG  P+ V +  +I   CS G +  A+++  +M  +G   +  
Sbjct: 417 KVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTV 476

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           T+ T++    +  +   AEE+   M A G+     TF  L +     GL K AKRI
Sbjct: 477 TYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLID-----GLCK-AKRI 526



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/400 (22%), Positives = 181/400 (45%), Gaps = 6/400 (1%)

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           ++  + S +      P    +  +I     +G  +       +M+  G         + +
Sbjct: 72  ALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFV 131

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           + Y    + +++V L+        V+ +   YN L+        +    +V ++M   G+
Sbjct: 132 ESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGI 191

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           +PDVVT NT+  A  +  +   A  ++ EM  + V P+  T   ++ G+ +EG I+ ALR
Sbjct: 192 QPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALR 251

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA-LMKEFR--VNPDVITYSTIMN 361
               M E G  P  V  N+LI G+ + M R  V++ L  + KE      PD +TY+T ++
Sbjct: 252 VKTKMMETGCSPTRVTVNVLINGYCK-MGR--VEDALGYIQKEIADGFEPDQVTYNTFVH 308

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                G +    ++ D M + G  PD   Y+ +     +  E ++A+ ++  M++ G  P
Sbjct: 309 CLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLP 368

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +   F T+I   CS   ++ A+++  ++   G+SP++ TF  L+    +   P     + 
Sbjct: 369 DTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLF 428

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           + MK+ G  P + T+ +L +   + G    A  +L ++++
Sbjct: 429 EEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMES 468



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 115/220 (52%), Gaps = 3/220 (1%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M    C R+  +   ++++L ++ + +EA+ +F+ +   G   S VT+ TL+  L   KR
Sbjct: 466 MESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKR 525

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    ++ Q+ + G+ P +I +N+++  + + G++++A D    M  +G      TY T
Sbjct: 526 IDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGT 585

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G   AG+ + ++KLL  M  +G ++P  + YN ++++     N+ +A ++  +M   
Sbjct: 586 LINGLCKAGRTQVALKLLRGMRIKG-IRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEV 644

Query: 243 GMKPDVVTYNTIATAYAQ-NGEADQAEEVIVEMEHNGVQP 281
           G  PD +TY  +     +  G   +A + +VEM + G  P
Sbjct: 645 GEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMP 684



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 60/285 (21%), Positives = 118/285 (41%), Gaps = 1/285 (0%)

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           +A     P    Y  I       G  D  E ++ EM   G +         +  Y +  +
Sbjct: 80  LAREDFAPSRAVYEEIIQKLGTAGAFDLMEGLVREMRREGHEAGAGVVRSFVESYARLRR 139

Query: 299 IKEALRFART-MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
             +A+   R  +  +GV  +  ++N L+    E      ++ V   M +  + PDV+T +
Sbjct: 140 FDDAVDLVRNQLNTFGVQADTAVYNHLLNVLAEGSRMKLLESVYNEMTDRGIQPDVVTLN 199

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           T++ A   A  +     + ++M    + PD   ++ L +G++ E   E A  +   M+E+
Sbjct: 200 TLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAALRVKTKMMET 259

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  P  V    +I+G+C  G ++ A+    K    G  P+  T+ T +    +      A
Sbjct: 260 GCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHA 319

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            +++ +M   G  P   T+  +       G   EAK I++++ ++
Sbjct: 320 LKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDR 364


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 119/399 (29%), Positives = 203/399 (50%), Gaps = 1/399 (0%)

Query: 84  ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
           + G  ++A+A+F+ +I  G  P    Y +L+     +K     + ++ ++++  +     
Sbjct: 362 KEGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPY 421

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            +   +     SG+++ A +   +M  SG  P    Y TLIK +    +  ++V++L  M
Sbjct: 422 TYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEM 481

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            RE  + P+   YN L+      K + EA + + +M  +G KPD  TY    + Y + GE
Sbjct: 482 -REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGE 540

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
              A++ + EM   GV PN   C  +I+ YCK+GK+ EA    R+M E G+  +   + +
Sbjct: 541 FASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTV 600

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           L+ G V+    +  +E+   M+   + PDV +Y T+++ +S  G M K   IFD+M +AG
Sbjct: 601 LMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAG 660

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           +  +   Y++L  G+ R  E EKA+ELL  M   GF PN V + TII G+C  G +  A 
Sbjct: 661 LTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAF 720

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           ++FD+M   G+ P+   + TL+ G        RA  I +
Sbjct: 721 QLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFE 759



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 133/549 (24%), Positives = 248/549 (45%), Gaps = 69/549 (12%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G    A  I   +   G +P++V YTTL+     + RF     ++ ++ E G+ PD+  +
Sbjct: 434 GDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCY 493

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N++I   S++  M+EA     +M E+G  P   TY   I GY  AG+   + K +  M  
Sbjct: 494 NSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEM-L 552

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           E  V PN      L+  +C +  + EA +    M   G+  D  TY  +     +NG+ +
Sbjct: 553 ECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVN 612

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            AEE+  EM   G+ P+  + G +I G+ K G +++A      M + G+  N++I+N+L+
Sbjct: 613 DAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLL 672

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF    + +   E+L  M      P+ +TY TI++ +  +G + +  ++FD+M   G+ 
Sbjct: 673 GGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEMKLKGLV 732

Query: 386 PDAHAYSILAKGYVREQEPEKA----------------------------------EELL 411
           PD+  Y+ L  G  R  + E+A                                   +++
Sbjct: 733 PDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFKFGKTELTTDMI 792

Query: 412 MTMIESGFH----PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +++  F     PN V +  +I   C +G+++ A E+F  M +  + P + T+ +L+ G
Sbjct: 793 NRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNG 852

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE---- 523
           Y +  +      +   + A G+ P    + ++  A    G+T +A  +L ++  K     
Sbjct: 853 YDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDD 912

Query: 524 -----------------RTNEMEAEEDIPVESLERL-YHKEATTASYPNLLQIPN--VVS 563
                            +  EME  E + VE++ RL Y  +++T     ++++ N   +S
Sbjct: 913 GCKLSISTCRALLSGFAKVGEMEVAEKV-VENMVRLKYIPDSST-----VIELINESCIS 966

Query: 564 SDQKGSAAA 572
           S+Q+ +A A
Sbjct: 967 SNQRMAADA 975



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 106/421 (25%), Positives = 188/421 (44%), Gaps = 60/421 (14%)

Query: 67  ESCRTVRSM------------TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL 114
           E+C   RSM            T LMN L++ GK  +A+ IF+ +   G  P + +Y TL 
Sbjct: 578 EACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTL- 636

Query: 115 AALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT 174
                                             I+ FS+ GNM++A   F +M ++GLT
Sbjct: 637 ----------------------------------IDGFSKLGNMQKASSIFDEMVQAGLT 662

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
                YN L+ G+  +G+ E++ +LLD MS +G   PN  TY  ++  +C   ++ EA+ 
Sbjct: 663 SNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKG-FPPNAVTYCTIIDGYCKSGDLAEAFQ 721

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           +  +M   G+ PD   Y T+     +  + ++A   I E    G   +      +I+   
Sbjct: 722 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERA-ITIFETNEKGCASSSAPFNALINWVF 780

Query: 295 KEGKIKEALRFAR-----TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           K GK +            +  ++G  PN V +N++I    +  + +   E+   M++  +
Sbjct: 781 KFGKTELTTDMINRLMDGSFDKFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANL 839

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            P VITY++++N +   G   +   +FD++  AGI+PD   YS++   +++E    KA  
Sbjct: 840 MPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALV 899

Query: 410 LLMTM-----IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           LL  M     ++ G   ++     ++SG+   G M+ A +V + M      P+  T   L
Sbjct: 900 LLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIEL 959

Query: 465 M 465
           +
Sbjct: 960 I 960



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/356 (24%), Positives = 166/356 (46%), Gaps = 17/356 (4%)

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL--TPTTSTYNTLIKGYGIAGKPEES 196
           D   + F  +I+ + E G ++EA+  F   K+  L   P+ +  N L+       + +  
Sbjct: 149 DDRVLLFGILIDGYIEKGFLDEAVFVFSSTKDLDLDLVPSLARCNHLLDALLKRNRLDLF 208

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
             +   M  E NV  ++++Y +L+ A C + N+  A +V+ K           T   + T
Sbjct: 209 WDVYKGMV-ERNVVFDVQSYEMLIGAHCRDGNVQLAKDVLLK-----------TEEELGT 256

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A       D+A E+   M   G+ P+ ++  ++I G CK+ ++++A      M   G+  
Sbjct: 257 ATLN---VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFA 313

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           + V +++LI G ++  + D  + ++  M     + D + Y   +   S  G M+K K +F
Sbjct: 314 DNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALF 373

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           D M   G+ P A AY+ L +G+ RE+   K  ELL+ + +     +   + T + G CS 
Sbjct: 374 DGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSS 433

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           G +D A  +  +M   G  PN+  + TL+  + +  +   A  +L+ M+  G+ P 
Sbjct: 434 GDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPD 489


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 222/452 (49%), Gaps = 42/452 (9%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+N L    +  E  A+   ++  G+ P +VTYTTL+  L ++ R +    + +++
Sbjct: 133 TLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRM 192

Query: 134 EENGMDPDSIFFNAVINAFSESGNM----------------------------------- 158
           ++ G  P++I +  ++     +GN+                                   
Sbjct: 193 QKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDAL 252

Query: 159 ------EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
                 +EA D F +MK  G+TPT  +Y +LI G+   GK EE+ +L + M  +G V+PN
Sbjct: 253 CKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQG-VQPN 311

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
           + T+NVL+   C E  + EA +++  M   G+ P+++TYN++   +   G+ + A E+ V
Sbjct: 312 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFV 371

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
            M   G +P+     ++I+GYCK  K++EA++    M + G  P++  +  L+ G  +  
Sbjct: 372 SMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGG 431

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
                 ++  +MK + +  D+  Y   +N     G + +  E+F+ +    IK D   ++
Sbjct: 432 KVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFN 491

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            L  G  +  + E A EL   + +    P+VV +  +I  +C  G + +A  +F KM ++
Sbjct: 492 CLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKN 551

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           G +P+  T+ TL+ G+ E+++  +  E+L +M
Sbjct: 552 GCTPDKITYATLIRGFFESKKLEKVVELLHMM 583



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 216/445 (48%), Gaps = 6/445 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S T L++ L +     +   ++N +   G  P   T   LL  L    R     ++M+
Sbjct: 96  LSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMA 155

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  PD + +  +I        + +A   F +M++ G TP   TY TL+KG    G
Sbjct: 156 GILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTG 215

Query: 192 KPEESVKLLDLMSREG-----NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
               ++KL   M  +      N KP + +Y++++ A C ++   EA ++  +M   GM P
Sbjct: 216 NISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTP 275

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
            V++Y ++   +   G+ ++A+ +  EM + GVQPN  T  ++I   CKEGK+ EA    
Sbjct: 276 TVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLL 335

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             M + G+ PNL+ +N LI+GF  + D +   E+   M      PDVI Y+ ++N +   
Sbjct: 336 EVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKT 395

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             +++  ++++ M + G +PD   Y  L  G  +  +   A++L   M   G   ++ I+
Sbjct: 396 SKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIY 455

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
              ++G C +G +  A+E+F+K+  + +  +++ F  L+ G  +A +   A E+ + +  
Sbjct: 456 GIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQ 515

Query: 487 FGVHPQKSTF-LLLAEARRATGLTK 510
             + P   T+ +++ E  R   + K
Sbjct: 516 EELQPDVVTYNIMIHEFCRGGQVVK 540



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/444 (24%), Positives = 211/444 (47%), Gaps = 15/444 (3%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A   F+ ++     P L ++T LL+ L   K ++ +  + +Q+  +G+ PD    N ++
Sbjct: 79  QAFQFFHLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILL 138

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N       + E +     +   G  P   TY TLIKG  +  +  ++  L   M + G  
Sbjct: 139 NCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG-C 197

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMA------ASGMKPDVVTYNTIATAYAQNGE 263
            PN  TY  L++  C   NI+ A  +  +M           KP V++Y+ I  A  ++  
Sbjct: 198 TPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRR 257

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D+A ++  EM+  G+ P   +   +I G+C  GK +EA R    M   GV PN+V FN+
Sbjct: 258 EDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNV 317

Query: 324 LIKGFVEIMDRDG----VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           LI    +++ ++G      ++L +M +  + P+++TY++++  +   G ++  +E+F  M
Sbjct: 318 LI----DVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSM 373

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G +PD   Y++L  GY +  + E+A +L   M++ G  P+V  +  +++G    G +
Sbjct: 374 PSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKV 433

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             A ++F  M  +G+  +L  +   + G  +    + A E+   +K++ +      F  L
Sbjct: 434 GDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCL 493

Query: 500 AEARRATGLTKEAKRILSKIKNKE 523
            +     G  + A  +  K+  +E
Sbjct: 494 IDGLCKAGKLETAWELFEKLPQEE 517



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 91/346 (26%), Positives = 175/346 (50%), Gaps = 1/346 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            V S + ++++L +  +  EA+ +F  +   G  P++++YT+L+       ++     + 
Sbjct: 241 VVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLF 300

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++   G+ P+ + FN +I+   + G + EA D    M + G+ P   TYN+LI+G+ + 
Sbjct: 301 NEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLV 360

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    + +L   M  +G  +P++  Y VL+  +C    + EA  + + M   G +PDV T
Sbjct: 361 GDLNSARELFVSMPSKG-CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 419

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  + T   Q G+   A+++   M+  G+  +    GI ++G CK G + EA+     +K
Sbjct: 420 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 479

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            Y +  ++  FN LI G  +    +   E+   + +  + PDV+TY+ +++ +   G + 
Sbjct: 480 SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVV 539

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           K   +F  M K G  PD   Y+ L +G+   ++ EK  ELL  M++
Sbjct: 540 KANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQ 585



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 141/282 (50%), Gaps = 1/282 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L + GK  EA+ +   +I+ G  P+L+TY +L+    +    NS   +  
Sbjct: 312 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFV 371

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G +PD I +  +IN + ++  +EEAM  +  M + G  P   TY  L+ G    G
Sbjct: 372 SMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGG 431

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  ++ KL  +M   G +  +L  Y + +   C    + EA  + +K+ +  +K D+  +
Sbjct: 432 KVGDAKKLFGVMKVYG-IPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECF 490

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     + G+ + A E+  ++    +QP+  T  I+I  +C+ G++ +A    + M++
Sbjct: 491 NCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEK 550

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
            G  P+ + +  LI+GF E    + V E+L +M +  V+ DV
Sbjct: 551 NGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 131/480 (27%), Positives = 230/480 (47%), Gaps = 36/480 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++  ++N+L + GK ++     + + E G  P +VTY TL++A + +        +M+
Sbjct: 235 VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMN 294

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  P    +N VIN   + G  E A + F +M  SGL+P ++TY +L+      G
Sbjct: 295 AMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKG 354

Query: 192 KPEESVK-------------------LLDLMSREGNVK---------------PNLRTYN 217
              E+ K                   ++ L +R GN+                P+   Y 
Sbjct: 355 DVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYT 414

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +L++ +C +  I+ A N+ ++M   G   DVVTYNTI     +     +A+++  EM   
Sbjct: 415 ILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTER 474

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
            + P+  T  I+I G+CK G ++ A+   + MKE  +  ++V +N L+ GF ++ D D  
Sbjct: 475 ALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTA 534

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E+ A M    + P  I+YS ++NA  + G + +   ++D+M    IKP     + + KG
Sbjct: 535 KEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKG 594

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH--GVS 455
           Y R       E  L  MI  GF P+ + + T+I G+  + +M +A  +  KM E   G+ 
Sbjct: 595 YCRSGNASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLV 654

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P++ T+ +++ G+    Q   AE +L+ M   GV+P +ST+  +     +     EA RI
Sbjct: 655 PDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRI 714



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 196/424 (46%), Gaps = 36/424 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++N L + GK + A+ +F  ++  G  P   TY +LL     +        + S
Sbjct: 305 VYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFS 364

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +    + PD + F+++++ F+ SGN+++A+  F  +KE+GL P    Y  LI+GY   G
Sbjct: 365 DMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG 424

Query: 192 KPEESVKLLDLMSREG----------------------------------NVKPNLRTYN 217
               ++ L + M ++G                                   + P+  T  
Sbjct: 425 MISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLT 484

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +L+   C   N+  A  +  KM    ++ DVVTYNT+   + + G+ D A+E+  +M   
Sbjct: 485 ILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSK 544

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
            + P   +  I+++  C +G + EA R    M    + P ++I N +IKG+    +    
Sbjct: 545 EILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDG 604

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG--KAGIKPDAHAYSILA 395
           +  L  M      PD I+Y+T++  +     M K   +   M   + G+ PD   Y+ + 
Sbjct: 605 ESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSIL 664

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G+ R+ + ++AE +L  MIE G +P+   +T +I+G+ S  ++  A  + D+M + G S
Sbjct: 665 HGFCRQNQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFS 724

Query: 456 PNLK 459
           P+ K
Sbjct: 725 PDDK 728



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 119/453 (26%), Positives = 217/453 (47%), Gaps = 19/453 (4%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  S++ +++ L+  G+  +AQ+    +I    + S V+   ++         NS+ S  
Sbjct: 112 TSLSLSAMIHILVRSGRLSDAQSCLLRMI----RRSGVSRLEIV---------NSLDSTF 158

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S    N    DS+F + +I  + ++  + EA + F  ++  G T +    N LI      
Sbjct: 159 SNCGSN----DSVF-DLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRI 213

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E +  +   +SR G V  N+ T N++V A C +  + +    + ++   G+ PD+VT
Sbjct: 214 GWVELAWGVYQEISRSG-VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVT 272

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+ +AY+  G  ++A E++  M   G  P   T   +I+G CK GK + A      M 
Sbjct: 273 YNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEML 332

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P+   +  L+    +  D    ++V + M+   V PD++ +S++M+ ++ +G +D
Sbjct: 333 RSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLD 392

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K    F+ + +AG+ PD   Y+IL +GY R+     A  L   M++ G   +VV + TI+
Sbjct: 393 KALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTIL 452

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C    +  A ++F++M E  + P+  T   L+ G+ +      A E+ Q MK   + 
Sbjct: 453 HGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIR 512

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
               T+  L +     G    AK I + + +KE
Sbjct: 513 LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKE 545



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 50/186 (26%), Positives = 92/186 (49%), Gaps = 3/186 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ++KE   T  S + L+N+L  +G   EA  +++ +I    KP+++   +++         
Sbjct: 542 VSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNA 601

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE--SGLTPTTSTYN 181
           +   S + ++   G  PD I +N +I  F    NM +A     KM+E   GL P   TYN
Sbjct: 602 SDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYN 661

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           +++ G+    + +E+  +L  M   G V P+  TY  ++  + ++ N+TEA+ +  +M  
Sbjct: 662 SILHGFCRQNQMKEAEVVLRKMIERG-VNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQ 720

Query: 242 SGMKPD 247
            G  PD
Sbjct: 721 RGFSPD 726


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 219/412 (53%), Gaps = 2/412 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++L + G+  EAQ +   + + G KP +VTY  L+     ++  +    + +++ + G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++PD + +N +I+ + ++  ++EAM  F ++    L PT ++YN+LI G   +G+     
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLLD M       P++ TYN+L+ A C E  I EA  V+  M   G+KP++VTYN +   
Sbjct: 391 KLLDEMHGSAQ-PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y      + A+++   M  +G++P+     ++I+GYCK   + EA+   + M+   + P+
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  +N LI G   +     V E+L  M +   +PDVITY+ +++A+      DK   +F 
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR 569

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            + + GI PD +    +     + ++ + AE+ L  ++  G  PNV  +T +I+  C DG
Sbjct: 570 QIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDG 628

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           S   A+ +  KM ++   P+  TFE ++    +  +  +AE++ + M A G+
Sbjct: 629 SFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 220/449 (48%), Gaps = 2/449 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L++ L + G   +A  + + + E G     VTY +L+       R+  +  +++++  
Sbjct: 199 SALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR 258

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             +DPD   FN +I+A  + G + EA      M + G  P   TYN L++GY       E
Sbjct: 259 ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHE 318

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +L + M + G ++P++  YNVL+  +C  K + EA  +  ++    + P + +YN++ 
Sbjct: 319 ARELFNRMVKRG-LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
                +G     ++++ EM  +   P+  T  I+I   CKEG+I EAL     M + GV 
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVK 437

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN+V +N ++ G+    + +   ++   M +  + PD++ Y+ ++N +     +D+   +
Sbjct: 438 PNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVL 497

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F +M    + PD  +Y+ L  G          +ELL  M +SG  P+V+ +  ++  +C 
Sbjct: 498 FKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCK 557

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
               D+AI +F ++ E G+ P+  T   ++    +  +   AE+ L+ +   G  P   T
Sbjct: 558 TQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQT 616

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKER 524
           + +L  A    G   EA  +LSK+++ +R
Sbjct: 617 YTILINALCKDGSFGEAMLLLSKMEDNDR 645



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 218/446 (48%), Gaps = 1/446 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   ++N     G   +A     NL+  G+     TY TL+  L+   +  +   ++ ++
Sbjct: 127 TFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM 186

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E++ + P+ + ++A+I+   + G + +A+    ++ E G+     TYN+LI G    G+ 
Sbjct: 187 EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRW 246

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E  +LL  M RE NV P+  T+N+L+ A C E  I EA  V+  M+  G KPD+VTYN 
Sbjct: 247 QEVTQLLTKMVRE-NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNA 305

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y       +A E+   M   G++P+     ++I GYCK   + EA+   + +    
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P +  +N LI G         V ++L  M      PDV+TY+ +++A    G + +  
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +   M K G+KP+   Y+ +  GY        A+++   M++SG  P+++ +  +I+G+
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C    +D AI +F +M    + P++ ++ +L+ G     +    +E+L  M   G  P  
Sbjct: 486 CKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDV 545

Query: 494 STFLLLAEARRATGLTKEAKRILSKI 519
            T+ +L +A   T    +A  +  +I
Sbjct: 546 ITYNILLDAFCKTQPFDKAISLFRQI 571



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/489 (24%), Positives = 229/489 (46%), Gaps = 3/489 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL+ +++  G    A ++F  L   G  PS+ T+T L+     Q       S+++ + ++
Sbjct: 60  KLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKS 119

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  P+ + FN +IN F  +G + +A+D    +   G      TY TLI G    G+ + +
Sbjct: 120 GYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAA 179

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + LL  M +  +V+PNL  Y+ L+   C +  +++A  +  ++   G+  D VTYN++  
Sbjct: 180 LHLLQEMEKS-SVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLID 238

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
                G   +  +++ +M    V P+  T  I+I   CKEG+I EA      M + G  P
Sbjct: 239 GCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKP 298

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++V +N L++G+    +     E+   M +  + PDV+ Y+ +++ +     +D+   +F
Sbjct: 299 DIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            ++    + P   +Y+ L  G          ++LL  M  S   P+VV +  +I   C +
Sbjct: 359 KELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKE 418

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +  A+ V   M + GV PN+ T+  +M GY        A++I   M   G+ P    +
Sbjct: 419 GRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNY 478

Query: 497 LLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI--PVESLERLYHKEATTASYPN 554
            +L      T +  EA  +  ++++K    ++ +   +   + +L R+ H +       +
Sbjct: 479 NVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCD 538

Query: 555 LLQIPNVVS 563
             Q P+V++
Sbjct: 539 SGQSPDVIT 547



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 185/383 (48%), Gaps = 1/383 (0%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P +  F+ ++ A    G+   A+  F +++  G++P+ +T+  LI  Y        +  L
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           L  + + G  +PNL T+N ++  +C    I +A +    + A G   D  TY T+    +
Sbjct: 113 LATILKSG-YQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +NG+   A  ++ EME + VQPN      +I G CK+G + +AL     + E G+  + V
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            +N LI G   +     V ++L  M    V+PD  T++ +++A    G + + + +   M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            K G KPD   Y+ L +GY   +   +A EL   M++ G  P+V+ +  +I G+C    +
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D A+ +F ++C   + P + ++ +L+ G   + +    +++L  M      P   T+ +L
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
            +A    G   EA  +L  +  K
Sbjct: 412 IDALCKEGRILEALGVLVMMMKK 434



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 158/343 (46%), Gaps = 11/343 (3%)

Query: 46  YSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKP 105
           Y  +K  D         C NK    T+ S   L++ L   G+    + + + +      P
Sbjct: 345 YCKTKMVDEAMVLFKELC-NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP 403

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
            +VTY  L+ AL  + R      ++  + + G+ P+ + +NA+++ +    N+  A D F
Sbjct: 404 DVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
            +M +SGL P    YN LI GY      +E++ L   M R  N+ P++ +YN L+   CN
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM-RHKNLIPDIASYNSLIDGLCN 522

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
              I     ++ +M  SG  PDV+TYN +  A+ +    D+A  +  ++   G+ P+  T
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYT 581

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALM 344
              I+   CK  K+K A    + +  +G  PN+  + +LI        +DG   E + L+
Sbjct: 582 NHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC----KDGSFGEAMLLL 637

Query: 345 KEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
            +   N   PD IT+  I+         DK +++ ++M   G+
Sbjct: 638 SKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/394 (21%), Positives = 157/394 (39%), Gaps = 40/394 (10%)

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C  +N+ +A    ++M      P    ++ +  A  + G    A  +  +++  G+ P+ 
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF--------------- 328
            T  I+I+ Y  +     A     T+ + G  PNLV FN +I GF               
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 329 ----------------VEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
                           +  + ++G +   L L++E     V P+++ YS +++     GF
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +     +   +G+ GI  DA  Y+ L  G       ++  +LL  M+     P+   F  
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I   C +G +  A  V   M + G  P++ T+  LM GY        A E+   M   G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESL---ERLYHK 545
           + P    + +L +    T +  EA  +  ++ NK     + +   + ++ L    R+ H 
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSL-IDGLCNSGRISHV 389

Query: 546 EATTASYPNLLQIPNVVSSDQKGSAAALKKGRML 579
           +          Q P+VV+ +    A   K+GR+L
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALC-KEGRIL 422



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 44/208 (21%), Positives = 84/208 (40%), Gaps = 37/208 (17%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   L++ L   G+    Q + + + + G  P ++TY  LL A    + F+   S+  
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR 569

Query: 132 QVEE----------------------------------NGMDPDSIFFNAVINAFSESGN 157
           Q+ E                                  +G  P+   +  +INA  + G+
Sbjct: 570 QIVEGIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGS 629

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG--NVKPNL-R 214
             EAM    KM+++   P   T+  +I       + +++ KL + M   G  N++ +L +
Sbjct: 630 FGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGLVNIEKSLNQ 689

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           ++NV   A    +++TE + V    A S
Sbjct: 690 SHNVFFPASSGFQSVTEFYRVQASHAGS 717


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 148/549 (26%), Positives = 247/549 (44%), Gaps = 59/549 (10%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  +M K+   L  +GK QEA+ I  ++   G  P   TYT+L+         +    + 
Sbjct: 204 TFNAMIKI---LCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMF 260

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ ++G DP+S+ ++A+IN     G +EEAMD   +M + G+ PT   Y   I     A
Sbjct: 261 DRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDA 320

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+  E+VKLL  M + G   PN++TY  L+     +     A  V HKM A G+ P  VT
Sbjct: 321 GRSCEAVKLLGKMKKRG-CGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVT 379

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +       G  + A  +   M  +   PN  T  +II G+C  G I++A      M 
Sbjct: 380 YSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQML 439

Query: 311 EYGVHPNLVIFNLLI-----KGF-------VEIMDRDG--------------------VD 338
           + G  PN++ +N++I     +G+       +E+M  +G                    ++
Sbjct: 440 KAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLE 499

Query: 339 EVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
              +L   M E  ++P+V+TY+ I+N + T   +D    +F  M ++G  P +  Y+++ 
Sbjct: 500 HAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMI 559

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G+ +     +AE     M++ G  PNV+ +T+ I G C +G    A ++F +M +    
Sbjct: 560 SGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYF 619

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           PNL T+ +L+ G  +  Q   AE +L      G  P   T+  L       G   EA ++
Sbjct: 620 PNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTYTTLVRGLCGKGRCYEADQL 675

Query: 516 LSKIKNK--------ERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQK 567
           +  +K K         R   +   +++ VES  +++    TT   P L        SD K
Sbjct: 676 VESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCL--------SDYK 727

Query: 568 GSAAALKKG 576
               AL K 
Sbjct: 728 ALICALCKA 736



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 221/453 (48%), Gaps = 1/453 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ S + L+  L +       + ++  ++  G +P+L T+  ++  L  + +      IM
Sbjct: 166 TLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFNAMIKILCNKGKVQEAELIM 225

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   G  PD+  + ++I    ++GN++ A + F +M + G  P + TY+ LI G    
Sbjct: 226 GHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSE 285

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ EE++ +L+ M  +G ++P +  Y + + + C+     EA  ++ KM   G  P+V T
Sbjct: 286 GRLEEAMDMLEEMIDKG-IEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQT 344

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  + +  +++G+ + A  V  +M  +G+ P   T   +I+    EG+ + AL     M 
Sbjct: 345 YTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWML 404

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            +   PN   +N++IKGF  I        +   M +   +P+VITY+ I++ +   G+M+
Sbjct: 405 SHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMN 464

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               + + M   G+K D   Y+ L  G+ R  + E A  L   M+E G  PNVV +  II
Sbjct: 465 NAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAII 524

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+ +   +D A+ +F KM E G  P+  T+  ++ G+S+  +   AE     M   G+ 
Sbjct: 525 NGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLL 584

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           P   T+    +     G T  A +I  ++K ++
Sbjct: 585 PNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRD 617



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 196/408 (48%), Gaps = 8/408 (1%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G  Q+A AIF+ +++ G  P+++TY  ++     Q   N+   ++  ++ NG+  D+  +
Sbjct: 426 GYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTY 485

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             +I+ FS  G +E A   F +M E G++P   TYN +I GY    K ++++ L   M  
Sbjct: 486 ANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVE 545

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            GNV P+  TYN+++  +     I+EA N   KM   G+ P+V+TY +      +NG   
Sbjct: 546 SGNV-PSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTS 604

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A ++  EM+     PN  T   +I G C+EG+ ++A R    + + G  PN+  +  L+
Sbjct: 605 LAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAER----LLDDGCEPNVDTYTTLV 660

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           +G          D+++  MK+  + P    Y  ++        ++   +IFD M   G +
Sbjct: 661 RGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQ 720

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P    Y  L     +    +KA+ +  TM++  ++ + V++T ++ G   +G  D ++E+
Sbjct: 721 PCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLEL 780

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              M     + N   F+T +    E      + EI QI K  G+  +K
Sbjct: 781 LHVMESRNCTLN---FQTRVMLARELSALGCSIEIPQISKQLGIVKEK 825



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 125/512 (24%), Positives = 221/512 (43%), Gaps = 44/512 (8%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C   V++ T L++ L   GK + A  +++ ++  G  P+ VTY+ L+  L ++ R
Sbjct: 333 MKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGR 392

Query: 123 FNSI-----------------------------------HSIMSQVEENGMDPDSIFFNA 147
           F +                                     +I  Q+ + G  P+ I +N 
Sbjct: 393 FETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNI 452

Query: 148 VINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
           +I+ + + G M  AM     MK +GL   T TY  LI G+   GK E +  L + M   G
Sbjct: 453 IIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHG 512

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
            + PN+ TYN ++  +     + +A  +  KM  SG  P   TYN + + +++     +A
Sbjct: 513 -ISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEA 571

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
           E    +M   G+ PN  T    I G CK G+   A +    MK+    PNL  ++ LI G
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDG 631

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             +    +G  E    + +    P+V TY+T++      G   +  ++ + M K G++P 
Sbjct: 632 LCQ----EGQAEDAERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPS 687

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y  L  G  +  E E A ++  +M+ +GF P +  +  +I   C      +A  +F 
Sbjct: 688 EEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQ 747

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            M +   + +   +  L+ G  +  +   + E+L +M++        T ++LA    A G
Sbjct: 748 TMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQTRVMLARELSALG 807

Query: 508 LTKEAKRI---LSKIKNKERTNEMEAEEDIPV 536
            + E  +I   L  +K K++       +DI +
Sbjct: 808 CSIEIPQISKQLGIVKEKQKQTADVLRDDIAL 839



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 94/190 (49%), Gaps = 4/190 (2%)

Query: 337 VDEVLALMKEFRVNPD----VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           V  V+ ++ E     D    + ++ST++            ++++ +M  +GI+P+   ++
Sbjct: 147 VKRVIQVLSEINTTYDFGYTLYSFSTLLIQLGKFDMDGLGRDVYIEMLNSGIRPNLFTFN 206

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            + K    + + ++AE ++  +   G  P+   +T++I G C +G++D A E+FD+M + 
Sbjct: 207 AMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRMVKD 266

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G  PN  T+  L+ G     +   A ++L+ M   G+ P    + +   +    G + EA
Sbjct: 267 GCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRSCEA 326

Query: 513 KRILSKIKNK 522
            ++L K+K +
Sbjct: 327 VKLLGKMKKR 336



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 97/232 (41%), Gaps = 5/232 (2%)

Query: 54  SQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTL 113
           S+ +  C   + +     V + T  ++ L + G+   A  IF+ + +  + P+L TY++L
Sbjct: 569 SEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSL 628

Query: 114 LAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL 173
           +  L  + +      ++    ++G +P+   +  ++      G   EA      MK+ GL
Sbjct: 629 IDGLCQEGQAEDAERLL----DDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGL 684

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
            P+   Y  L+ G     + E ++K+ D M   G  +P L  Y  L+ A C      +A 
Sbjct: 685 QPSEEIYRALLVGQCKNLEVESALKIFDSMVTTG-FQPCLSDYKALICALCKANFRQKAQ 743

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
            +   M       D V +  +     + GE D + E++  ME      N +T
Sbjct: 744 CMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESRNCTLNFQT 795


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 231/476 (48%), Gaps = 26/476 (5%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+++  ++ K +EA A+   +  GG   +L++Y +++  L  + R + +  ++ 
Sbjct: 242 VVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVE 301

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD + +N ++N F + GN+ + +    +M   GL+P   TY TLI     AG
Sbjct: 302 EMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAG 361

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               +V++ D M   G ++PN RTY  L+  +C +  + EA+ V+ +M  SG  P VVTY
Sbjct: 362 NLSRAVEIFDQMRVRG-LRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTY 420

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y   G   +A  ++  M   G+ P+  +   +I+G+C+E ++ +A +    M E
Sbjct: 421 NALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVE 480

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            GV P+ V ++ LI+G      +  + E   L +E     + PD +TY++++NA+   G 
Sbjct: 481 KGVLPDTVTYSSLIQGLCL---QQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGE 537

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           + K   + D+M + G  PD   YS+L  G  ++   + A+ LL+ +      P+ V + T
Sbjct: 538 LSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNT 597

Query: 429 II---------------SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           +I                G+C  G M+ A  VF  M +    PN   +  ++ G+S    
Sbjct: 598 LIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGN 657

Query: 474 PWRAEEILQIMK--AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNE 527
             +A  +   ++  +F  H      L+ A AR   G+  E  R+L  I    R N+
Sbjct: 658 VHKAYNLYMELEHSSFACHTVAVIALVKALARE--GMNDELSRLLQNILRSCRLND 711



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 211/427 (49%), Gaps = 6/427 (1%)

Query: 102 GHKPSLVTYTTLLAAL-----TIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESG 156
           G  P++++Y  +L AL     +  + ++    +   +  NG+ P+   +N +I      G
Sbjct: 162 GFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQG 221

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
           ++E+ +    KM++ G++P   TYNTLI       K +E++ LL  M+  G V  NL +Y
Sbjct: 222 DLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAMA-VGGVAANLISY 280

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N ++   C +  ++E   ++ +M   G+ PD VTYNT+   + + G   Q   ++ EM  
Sbjct: 281 NSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVG 340

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G+ PN  T   +I+  CK G +  A+     M+  G+ PN   +  LI GF +    + 
Sbjct: 341 KGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNE 400

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             +VL+ M     +P V+TY+ +++ +   G + +   I   M + G+ PD  +YS +  
Sbjct: 401 AYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIA 460

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G+ RE+E  KA ++   M+E G  P+ V ++++I G C    +  A ++F +M   G+ P
Sbjct: 461 GFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPP 520

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +  T+ +L+  Y    +  +A  +   M   G  P   T+ +L         TK AKR+L
Sbjct: 521 DEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLL 580

Query: 517 SKIKNKE 523
            K+  +E
Sbjct: 581 LKLFYEE 587



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 104/393 (26%), Positives = 201/393 (51%), Gaps = 6/393 (1%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAF-----SESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +++     +G  P  + +NAV++A      S   + ++A   F  M  +G++P   TYN 
Sbjct: 153 TLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDAERVFRDMVRNGVSPNVYTYNV 212

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I+G    G  E+ +  +  M +EG + PN+ TYN L+ A C +K + EA  ++  MA  
Sbjct: 213 IIRGVVSQGDLEKGLGFMRKMEKEG-ISPNVVTYNTLIDASCKKKKVKEAMALLRAMAVG 271

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+  ++++YN++       G   +  E++ EM   G+ P+  T   +++G+CKEG + + 
Sbjct: 272 GVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNLHQG 331

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L     M   G+ PN+V +  LI    +  +     E+   M+   + P+  TY+T+++ 
Sbjct: 332 LVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDG 391

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +   G M++  ++  +M  +G  P    Y+ L  GY      ++A  +L  M+E G  P+
Sbjct: 392 FCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPD 451

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           VV ++T+I+G+C +  + +A ++ ++M E GV P+  T+ +L+ G    ++   A ++ +
Sbjct: 452 VVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFDLFR 511

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
            M   G+ P + T+  L  A    G   +A R+
Sbjct: 512 EMMRRGLPPDEVTYTSLINAYCVDGELSKALRL 544



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/363 (27%), Positives = 186/363 (51%), Gaps = 12/363 (3%)

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP-----EES 196
           S  F+ V+ + S  G + +A+         G  PT  +YN ++              +++
Sbjct: 132 SAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRSSSNHRDYDDA 191

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            ++   M R G V PN+ TYNV++R   ++ ++ +    M KM   G+ P+VVTYNT+  
Sbjct: 192 ERVFRDMVRNG-VSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLID 250

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A  +  +  +A  ++  M   GV  N  +   +I+G C +G++ E       M+  G+ P
Sbjct: 251 ASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVP 310

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCK 373
           + V +N L+ GF +      + + L L+ E     ++P+V+TY+T++N    AG + +  
Sbjct: 311 DEVTYNTLVNGFCK---EGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAV 367

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           EIFD M   G++P+   Y+ L  G+ ++    +A ++L  MI SGF P+VV +  ++ G+
Sbjct: 368 EIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGY 427

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G +  A+ +   M E G+ P++ ++ T++ G+   R+  +A ++ + M   GV P  
Sbjct: 428 CFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDT 487

Query: 494 STF 496
            T+
Sbjct: 488 VTY 490



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/401 (24%), Positives = 187/401 (46%), Gaps = 16/401 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+N + + G    A  IF+ +   G +P+  TYTTL+     +   N  + ++S
Sbjct: 347 VVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLS 406

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G  P  + +NA+++ +   G ++EA+     M E GL P   +Y+T+I G+    
Sbjct: 407 EMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRER 466

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  ++ ++ + M  +G V P+  TY+ L++  C ++ + EA+++  +M   G+ PD VTY
Sbjct: 467 ELGKAFQMKEEMVEKG-VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTY 525

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++  AY  +GE  +A  +  EM   G  P+  T  ++I+G  K+ + K A R    +  
Sbjct: 526 TSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFY 585

Query: 312 YGVHPNLVIFNLLI---------------KGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
               P+ V +N LI               KGF      +  D V   M +    P+   Y
Sbjct: 586 EESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIY 645

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           + +++  S  G + K   ++ ++  +       A   L K   RE   ++   LL  ++ 
Sbjct: 646 NLMIHGHSRGGNVHKAYNLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNILR 705

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           S    +  +   ++     +G+MD  + V  +M + G+ P+
Sbjct: 706 SCRLNDAKVAKVLVEVNFKEGNMDAVLNVLTEMAKDGLLPD 746


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 230/468 (49%), Gaps = 36/468 (7%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+ ++N ++E G +P++VTY T+L +   Q +      ++ Q+++ G  P+ + +N ++N
Sbjct: 174 AREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVN 233

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
             S SG +E+A +   +M   GL  +  TY+ LI+GY   G+ +E+ +L + M   G V 
Sbjct: 234 GLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAV- 292

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P L TYN ++   C    +++A  ++  M    + PD+V+YNT+   Y + G   +A  +
Sbjct: 293 PTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLL 352

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             E+   G+ P+  T   +I G C+ G +  A+R    M ++G  P++  F +L++GF +
Sbjct: 353 FAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCK 412

Query: 331 I----MDRDGVDEVL-------------ALMKEFRVN------------------PDVIT 355
           +    M ++  DE+L              ++ E ++                   PD+IT
Sbjct: 413 LGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLIT 472

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+  ++     G + +  E+   M   G+ PD   Y+ +   ++      KA  + + M+
Sbjct: 473 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEML 532

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G  P+VV +T +I  +   G +  AI  F +M E GV PN+ T+  L+ G  + R+  
Sbjct: 533 SKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMD 592

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           +A +    M+A G+ P K T+ +L       G  +EA R+   + ++E
Sbjct: 593 QAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDRE 640



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 210/422 (49%), Gaps = 6/422 (1%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI---HSIMSQVEENGMDPDSIFFNAVIN 150
           +F  ++  G  P L     +L  L  + R +SI     + + + E G+ P  + +N +++
Sbjct: 141 VFYKMVSKGMLPDLKNCNRVLRLL--RDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLD 198

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           +F + G ++EA+    +M++ G  P   TYN L+ G   +G+ E++ +L+  M R G ++
Sbjct: 199 SFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLG-LE 257

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
            +  TY+ L+R +C +  + EA  +  +M + G  P +VTYNTI     + G    A ++
Sbjct: 258 VSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKL 317

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +  M +  + P+  +   +I GY + G I EA      ++  G+ P++V +N LI G   
Sbjct: 318 LDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCR 377

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           + D D    +   M +   +PDV T++ ++  +   G +   KE+FD+M   G++PD  A
Sbjct: 378 MGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFA 437

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y     G ++  +P KA  +   M+  GF P+++ +   I G    G++  A E+  KM 
Sbjct: 438 YITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKML 497

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
            +G+ P+  T+ +++  +  A    +A  +   M + G+ P   T+ +L  +    G  K
Sbjct: 498 YNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLK 557

Query: 511 EA 512
            A
Sbjct: 558 LA 559



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 110/449 (24%), Positives = 216/449 (48%), Gaps = 6/449 (1%)

Query: 75  MTKLMNSLIERGKPQEAQAIFN-NLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + +++N++  R +P  A   F     + G K S +TY  +L  L       S + +M +V
Sbjct: 50  LVRVLNTV--RHRPAVALRFFRWAERQTGFKRSELTYAVILDILARNGLMRSAYCVMEKV 107

Query: 134 EENGMDPDSIFFNAVINA---FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
               M+   +    +      +++   +E+ +  F+KM   G+ P     N +++     
Sbjct: 108 VSVKMENGVVDVLILDLLLWIYAKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDR 167

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
               +  + +  +  E  ++P + TYN ++ ++C +  + EA  ++ +M   G  P+ VT
Sbjct: 168 DSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVT 227

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +    + +GE +QA+E+I EM   G++ +  T   +I GYC++G++ EA R    M 
Sbjct: 228 YNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEML 287

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  P LV +N ++ G  +        ++L +M    + PD+++Y+T++  ++  G + 
Sbjct: 288 SRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIG 347

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +F ++   G+ P    Y+ L  G  R  + + A  L   MI+ G  P+V  FT ++
Sbjct: 348 EAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILV 407

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+C  G++  A E+FD+M   G+ P+   + T + G  +   P +A  + + M A G  
Sbjct: 408 RGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFP 467

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
           P   T+ +  +     G  KEA  ++ K+
Sbjct: 468 PDLITYNVFIDGLHKLGNLKEASELVKKM 496



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 183/388 (47%), Gaps = 1/388 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+    E+G+  EA  +   ++  G  P+LVTY T++  L    R +    ++  +    
Sbjct: 266 LIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKN 325

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +N +I  ++  GN+ EA   F +++  GL P+  TYNTLI G    G  + ++
Sbjct: 326 LMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAM 385

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L D M + G   P++ T+ +LVR +C   N+  A  +  +M   G++PD   Y T    
Sbjct: 386 RLKDEMIKHGP-DPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVG 444

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+  +A  +  EM   G  P+  T  + I G  K G +KEA    + M   G+ P+
Sbjct: 445 ELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPD 504

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +  +I   +          V   M    + P V+TY+ ++++++  G +      F 
Sbjct: 505 HVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFF 564

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M + G+ P+   Y+ L  G  + ++ ++A +    M   G  PN   +T +I+  C+ G
Sbjct: 565 EMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLG 624

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLM 465
               A+ ++  M +  + P+  T   L+
Sbjct: 625 HWQEALRLYKDMLDREIQPDSCTHSALL 652



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/333 (29%), Positives = 157/333 (47%), Gaps = 1/333 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +NK     + S   L+      G   EA  +F  L   G  PS+VTY TL+  L      
Sbjct: 322 VNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDL 381

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +  ++ ++G DPD   F  ++  F + GN+  A + F +M   GL P    Y T 
Sbjct: 382 DVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITR 441

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G    G P ++  + + M   G   P+L TYNV +       N+ EA  ++ KM  +G
Sbjct: 442 IVGELKLGDPSKAFGMQEEMLARG-FPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNG 500

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           + PD VTY +I  A+   G   +A  V +EM   G+ P+  T  ++I  Y   G++K A+
Sbjct: 501 LVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAI 560

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M E GVHPN++ +N LI G  ++   D   +    M+   ++P+  TY+ ++N  
Sbjct: 561 LHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINEN 620

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              G   +   ++ DM    I+PD+  +S L K
Sbjct: 621 CNLGHWQEALRLYKDMLDREIQPDSCTHSALLK 653



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 1/216 (0%)

Query: 83  IERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS 142
           ++ G P +A  +   ++  G  P L+TY   +  L           ++ ++  NG+ PD 
Sbjct: 446 LKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDH 505

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           + + ++I+A   +G++ +A   F +M   G+ P+  TY  LI  Y + G+ + ++     
Sbjct: 506 VTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFE 565

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           M  +G V PN+ TYN L+   C  + + +A+    +M A G+ P+  TY  +       G
Sbjct: 566 MHEKG-VHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLG 624

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
              +A  +  +M    +QP+  T   ++    K+ K
Sbjct: 625 HWQEALRLYKDMLDREIQPDSCTHSALLKHLNKDYK 660



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 137/288 (47%), Gaps = 14/288 (4%)

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQA----EEVI-VEMEHNGVQPNGRTCGIIISGYCKE 296
           +G K   +TY  I    A+NG    A    E+V+ V+ME+  V        + I  Y K+
Sbjct: 75  TGFKRSELTYAVILDILARNGLMRSAYCVMEKVVSVKMENGVVDVLILDLLLWI--YAKK 132

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VD---EVLALMKEFRVNPD 352
             +++ L     M   G+ P+L   N +++    + DRD  +D   EV  +M E  + P 
Sbjct: 133 SMLEKCLLVFYKMVSKGMLPDLKNCNRVLR---LLRDRDSSIDVAREVYNVMVECGIRPT 189

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
           V+TY+T+++++   G + +  ++   M K G  P+   Y++L  G     E E+A+EL+ 
Sbjct: 190 VVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQ 249

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M+  G   +   +  +I G+C  G +D A  + ++M   G  P L T+ T+M+G  +  
Sbjct: 250 EMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWG 309

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +   A ++L +M    + P   ++  L       G   EA  + ++++
Sbjct: 310 RVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELR 357


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 211/432 (48%), Gaps = 1/432 (0%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           NK   R   S T L++   E  +  EA  +F+ + E    P++ TYT ++ AL    R  
Sbjct: 267 NKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKT 326

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
              ++  ++ E    P+   +  +I +  E  N ++A      M E GL P+  TYN LI
Sbjct: 327 EALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALI 386

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            GY   G    ++++L LM    N  PN RTYN L+  +C  KNI +A +++HKM    +
Sbjct: 387 DGYCKKGLSASALEILSLM-ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKL 445

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           +P+VVTYN +     + G+   A +++  M  +G+ P+  T  + I   CK G ++EA  
Sbjct: 446 QPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARS 505

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
              ++KE G+  N VI++ LI G+ ++        +L  M      P+ ITY+++++ + 
Sbjct: 506 LFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYC 565

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
                 + + + D M K  I+P A  Y+IL    +++ E ++A ++   M+ +G HP+V 
Sbjct: 566 KEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVF 625

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           I+T  I  +CS G +  A  +  KM   G+ P+   +   +  Y        A  IL+ M
Sbjct: 626 IYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRM 685

Query: 485 KAFGVHPQKSTF 496
              G  P   T+
Sbjct: 686 HEVGCEPSYYTY 697



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 221/451 (49%), Gaps = 1/451 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + ++  ++N   + G   EA+   + +++ G      TYT+L+      K  ++ ++I  
Sbjct: 204 IFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFL 263

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G   + + +  +I+ F E+  ++EA+  F +M E    PT  TY  +I      G
Sbjct: 264 SMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLG 323

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E++ +   M+ E + +PN+ TY VL+ + C + N  +A  +++ M   G+ P VVTY
Sbjct: 324 RKTEALNMFKEMT-EKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTY 382

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y + G +  A E++  ME N   PN RT   +I G+C+   I +A+     M E
Sbjct: 383 NALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLE 442

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             + PN+V +N+LI G  +  D     ++L+LM E  + PD  TYS  ++     G +++
Sbjct: 443 RKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEE 502

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            + +F+ + + GIK +   YS L  GY +  +      LL  M+ +G  PN + + ++I 
Sbjct: 503 ARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLID 562

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C + +   A  + D M +  + P   T+  L+    +  +  +A ++   M + G HP
Sbjct: 563 GYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHP 622

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
               +     A  + G  K+A+ ++ K+  K
Sbjct: 623 DVFIYTAFIHAYCSHGRLKDAEVLICKMNAK 653



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 108/410 (26%), Positives = 200/410 (48%), Gaps = 2/410 (0%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M++++C  TVR+ T ++ +L + G+  EA  +F  + E   +P++ TYT L+ +L     
Sbjct: 300 MHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSN 359

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F+    I++ + E G+ P  + +NA+I+ + + G    A++    M+ +  +P   TYN 
Sbjct: 360 FDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNE 419

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+       +++ LL  M  E  ++PN+ TYN+L+   C E ++  A+ ++  M  S
Sbjct: 420 LILGFCRGKNIHKAMSLLHKM-LERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNES 478

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ PD  TY+       + G  ++A  +   ++  G++ N      +I GYCK GK+ + 
Sbjct: 479 GLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDG 538

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M   G  PN + +N LI G+ +  +      ++ +M +  + P   TY+ +++ 
Sbjct: 539 RFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDN 598

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
                  D+  ++FD M   G  PD   Y+     Y      + AE L+  M   G  P+
Sbjct: 599 LLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPD 658

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            +++T  I  +   GS+D A  +  +M E G  P+  T+  L+   S A+
Sbjct: 659 TMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAK 708



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 124/517 (23%), Positives = 203/517 (39%), Gaps = 64/517 (12%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C+  V + T L+ SL E     +A+ I N ++E G  PS+VTY  L+     +  
Sbjct: 335 MTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGL 394

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
             S   I+S +E N   P++  +N +I  F    N+ +AM    KM E  L P   TYN 
Sbjct: 395 SASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNI 454

Query: 183 LIKGYGIAGKPEESVKLLDLMSREG----------------------------------N 208
           LI G    G    + KLL LM+  G                                   
Sbjct: 455 LIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKG 514

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           +K N   Y+ L+  +C    +++   ++ KM ++G  P+ +TYN++   Y +     +A 
Sbjct: 515 IKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEAR 574

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            ++  M    ++P   T  I+I    K+ +  +A      M   G HP++ I+   I  +
Sbjct: 575 LLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAY 634

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
                    + ++  M    + PD + Y+  ++A+   G +D    I   M + G +P  
Sbjct: 635 CSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSY 694

Query: 389 HAYSILAKGYV-----------------------------REQEPEKAEELLMTMIESGF 419
           + YS L K                                R  + E   +L   M E G 
Sbjct: 695 YTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGC 754

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            PN   +   I+G C  G ++ A  +FD M E G SPN   + +L+    +      A  
Sbjct: 755 APNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIR 814

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
            L IM      P   +  LL       G  ++AKR+ 
Sbjct: 815 WLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVF 851



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/314 (24%), Positives = 146/314 (46%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V PN+ T N +V  +C   N+ EA   + K+  +G+  D  TY ++   Y +N   D A 
Sbjct: 200 VTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAAN 259

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            + + M + G   N  +   +I G+C+  ++ EAL+    M E    P +  + ++I   
Sbjct: 260 AIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFAL 319

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            ++  +     +   M E    P+V TY+ ++ +       D  K+I + M + G+ P  
Sbjct: 320 CQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSV 379

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y+ L  GY ++     A E+L  M  +   PN   +  +I G+C   ++ +A+ +  K
Sbjct: 380 VTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHK 439

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M E  + PN+ T+  L+ G  +      A ++L +M   G+ P + T+ +  +     GL
Sbjct: 440 MLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGL 499

Query: 509 TKEAKRILSKIKNK 522
            +EA+ +   +K K
Sbjct: 500 VEEARSLFESLKEK 513



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 140/308 (45%)

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           K  LR YN+L+        I E  +V  +M    + P++ T NT+   Y + G   +AE 
Sbjct: 166 KLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAEL 225

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
            + ++   G+  +  T   +I GYC+   +  A     +M   G   N V +  LI GF 
Sbjct: 226 YVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFC 285

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           E    D   ++ + M E    P V TY+ I+ A    G   +   +F +M +   +P+ H
Sbjct: 286 EARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVH 345

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y++L      +   + A+++L  M+E G  P+VV +  +I G+C  G    A+E+   M
Sbjct: 346 TYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLM 405

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
             +  SPN +T+  L+ G+   +   +A  +L  M    + P   T+ +L   +   G  
Sbjct: 406 ESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDL 465

Query: 510 KEAKRILS 517
             A ++LS
Sbjct: 466 GSAYKLLS 473



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/421 (21%), Positives = 178/421 (42%), Gaps = 32/421 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            +++L +RG  +EA+++F +L E G K + V Y+TL+       + +    ++ ++   G
Sbjct: 490 FIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAG 549

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+SI +N++I+ + +  N +EA      M +  + P   TY  LI       + +++ 
Sbjct: 550 CVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAH 609

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            + D M   G+  P++  Y   + A+C+   + +A  ++ KM A G+ PD + Y     A
Sbjct: 610 DMFDQMLSTGS-HPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDA 668

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA--------------- 302
           Y + G  D A  ++  M   G +P+  T   +I  +    K KE                
Sbjct: 669 YGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIK-HLSNAKPKEVSSSSELSDLSSGVAS 727

Query: 303 ---------------LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
                          L     M E+G  PN   +   I G  ++   +    +   MKE 
Sbjct: 728 NDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEK 787

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
             +P+   Y++++      G   +     D M +    P   +  +L  G   E   EKA
Sbjct: 788 GQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKA 847

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           + +  + ++  ++ + +++  +I G    G  D+  ++F  M   G   + KT+  L+ G
Sbjct: 848 KRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEG 907

Query: 468 Y 468
           +
Sbjct: 908 F 908



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 145/357 (40%), Gaps = 34/357 (9%)

Query: 80  NSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           NSLI+        +EA+ + + +I+   +P+  TYT L+  L     F+  H +  Q+  
Sbjct: 558 NSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLS 617

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  PD   + A I+A+   G +++A     KM   G+ P T  Y   I  YG  G  + 
Sbjct: 618 TGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDG 677

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK--------------------NITEAW-- 233
           +  +L  M   G  +P+  TY+ L++   N K                    + +  W  
Sbjct: 678 AFGILKRMHEVG-CEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRR 736

Query: 234 -------NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
                  ++  KMA  G  P+  TY    T   + G  + A  +   M+  G  PN    
Sbjct: 737 VDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIY 796

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             ++   C+ G   EA+R+   M E    P+L    LL+ G  +  + +    V     +
Sbjct: 797 NSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQ 856

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
              N D + +  +++     G  DKC ++F  M   G +     YS+L +G+   QE
Sbjct: 857 CEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYSMLIEGFDGIQE 913



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 71/336 (21%), Positives = 130/336 (38%), Gaps = 81/336 (24%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+++L++  +  +A  +F+ ++  G  P +  YT  + A     R      ++ ++
Sbjct: 591 TYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKM 650

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+ PD++ +   I+A+   G+++ A     +M E G  P+  TY+ LIK    A KP
Sbjct: 651 NAKGIMPDTMLYTLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNA-KP 709

Query: 194 EESVKL---------------------------LDLMSR--EGNVKPNLRTYNVLVRAWC 224
           +E                               LDL  +  E    PN  TY   +   C
Sbjct: 710 KEVSSSSELSDLSSGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLC 769

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ---NGEADQAEEVIVEMEHNGVQP 281
               +  A  +   M   G  P+   YN++     Q    GEA +  ++++E  H    P
Sbjct: 770 KVGCLEVAHRLFDHMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRH---LP 826

Query: 282 NGRTCGIIISGYCKEGKIKEALR-FARTMK-EYG-------------------------- 313
           +  +C +++ G   EG  ++A R F   ++ EY                           
Sbjct: 827 HLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLF 886

Query: 314 ---------VHPNLVIFNLLIKGFVEIMDRDGVDEV 340
                    +HP    +++LI+GF      DG+ E+
Sbjct: 887 GIMETQGCQIHPK--TYSMLIEGF------DGIQEI 914



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 36/177 (20%), Positives = 79/177 (44%)

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
           F+    +  Y+ ++   S    +D+ K ++ +M    + P+    + +  GY +     +
Sbjct: 163 FKFKLTLRCYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVE 222

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           AE  +  ++++G   +   +T++I G+C + ++D A  +F  M   G   N  ++  L+ 
Sbjct: 223 AELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIH 282

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           G+ EAR+   A ++   M      P   T+ ++  A    G   EA  +  ++  K 
Sbjct: 283 GFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKH 339


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  208 bits (529), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 131/494 (26%), Positives = 238/494 (48%), Gaps = 46/494 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSI 129
           TV + + LM+      +P     +F  ++  G K   +T +TLL  L    R   +++ +
Sbjct: 156 TVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAVNVL 215

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG--LTPTTSTYNTLIKGY 187
           + ++ E G  P+   ++ ++    ++   + A+D F  M + G   +P    YNT+I G+
Sbjct: 216 LHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVIHGF 275

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G+  ++  L   M+R+G VKP++ TYN+++ A C  + + +A  V+ +M  +G +PD
Sbjct: 276 FKEGETGKACSLFHEMTRQG-VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPD 334

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
            VTYN +   YA  G   +A ++  +M+  G+ PN   C   ++  CK G+ KEA     
Sbjct: 335 TVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFD 394

Query: 308 TMKEYGVHPNLV-----------------------------------IFNLLIKGFVEIM 332
           +M   G  P++V                                   +FN+LI  + +  
Sbjct: 395 SMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAK-- 452

Query: 333 DRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
            R  VD+ + +  E +   V+PDV+TYST+++A+S  G +    E F+ M   GI+P+  
Sbjct: 453 -RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTA 511

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGF-HPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
            Y  + +G+       KA+EL+  MI  G   P++V F ++I+  C DG +  A ++FD 
Sbjct: 512 VYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDL 571

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           + + G  P++ TF +L+ GY    +  +A +IL  M+  GV     T+  L +     G 
Sbjct: 572 VTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGR 631

Query: 509 TKEAKRILSKIKNK 522
             +   +  +++ K
Sbjct: 632 INDGLTLFREMQRK 645



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/520 (23%), Positives = 232/520 (44%), Gaps = 72/520 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++   + G+  +A ++F+ +   G KP +VTY  ++ AL   +  +    ++ 
Sbjct: 265 VVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLR 324

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+  NG  PD++ +N +I+ ++  G ++EA   F KMK  GL P     N+ +      G
Sbjct: 325 QMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHG 384

Query: 192 KPEESVKLLDLMSREGNVKPNL-----------------------------------RTY 216
           + +E+ ++ D M+ +G+ KP++                                   R +
Sbjct: 385 RSKEAAEIFDSMTAKGH-KPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVF 443

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N+L+ A+     + +A  +  +M   G+ PDVVTY+T+ +A+++ G    A E   +M  
Sbjct: 444 NILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVA 503

Query: 277 NGVQPNGRTCGIIISGYC------------------------------------KEGKIK 300
            G+QPN      II G+C                                    K+G++ 
Sbjct: 504 RGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVM 563

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           +A      + + G  P+++ F  LI G+  +   D   ++L  M+   V  D++TYST++
Sbjct: 564 DAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLL 623

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           + +   G ++    +F +M + G+KP+   Y I+  G  R      A +    MIESG  
Sbjct: 624 DGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTT 683

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
             V I+  I+ G C +   D AI +F K+    V  ++    T++    + ++   A+E+
Sbjct: 684 VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKEL 743

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
              + A G+ P +ST+ ++       G  ++A  + S ++
Sbjct: 744 FATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSME 783



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 195/414 (47%), Gaps = 35/414 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK-------RFNSIHS-- 128
            + SL + G+ +EA  IF+++   GHKP +V+Y TLL     +         FNS+ S  
Sbjct: 376 FLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNG 435

Query: 129 --------------------------IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
                                     I +++++ G+ PD + ++ VI+AFS  G + +AM
Sbjct: 436 IAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAM 495

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
           + F +M   G+ P T+ Y+++I+G+ + G   ++ +L+  M  +G  +P++  +N ++ +
Sbjct: 496 EKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINS 555

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C +  + +A ++   +   G +PDV+T+ ++   Y   G+ D+A +++  ME  GV+ +
Sbjct: 556 LCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETD 615

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   ++ GY K G+I + L   R M+  GV PN V + +++ G           +   
Sbjct: 616 IVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFH 675

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M E      V  Y  I+         D+   +F  +G   +K      + +     + Q
Sbjct: 676 EMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQ 735

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
             E+A+EL  T+  SG  PN   +  +I     DG+++ A  +F  M + G+ P
Sbjct: 736 RKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVP 789



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 142/290 (48%), Gaps = 1/290 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++NSL + G+  +A  IF+ + + G +P ++T+T+L+    +  + +    I+  +E  G
Sbjct: 552 VINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVG 611

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++ D + ++ +++ + ++G + + +  F +M+  G+ P T TY  ++ G   AG+   + 
Sbjct: 612 VETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAAR 671

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K    M   G     +  Y +++   C      EA  +  K+    +K  +   NT+  A
Sbjct: 672 KKFHEMIESGTT-VTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINA 730

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    ++A+E+   +  +G+ PN  T G++I    K+G +++A     +M++ G+ P 
Sbjct: 731 MYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPG 790

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
             + N +I+  +E  +       L+ +   R+  +  T S +++ +S  G
Sbjct: 791 SRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKG 840



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/234 (20%), Positives = 102/234 (43%), Gaps = 1/234 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + + L++   + G+  +   +F  +   G KP+ VTY  +LA L    R  +      
Sbjct: 616 IVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFH 675

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E+G       +  ++     +   +EA+  F K+    +  + +  NT+I       
Sbjct: 676 EMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQ 735

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE+ +L   +S  G + PN  TY V++     +  + +A N+   M  SG+ P     
Sbjct: 736 RKEEAKELFATISASG-LLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLL 794

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           N I     + GE  +A   + +++   +     T  +++S + ++GK  E ++ 
Sbjct: 795 NRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKL 848



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 70/179 (39%), Gaps = 41/179 (22%)

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE---------------- 405
           A + A F   C+E     G   +    H YSIL     R + P+                
Sbjct: 134 ALALALFNRVCRE---QAGPRVVPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKI 190

Query: 406 ----------------KAEE----LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
                           + EE    LL  M E G  PNV  ++ I+ G C +    RA+++
Sbjct: 191 HQITASTLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDL 250

Query: 446 FDKMCEHG--VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           F  M + G   SPN+  + T++ G+ +  +  +A  +   M   GV P   T+ L+ +A
Sbjct: 251 FQMMAKEGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDA 309


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 213/410 (51%), Gaps = 3/410 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   ++N     G+  +A  +F  +++ G +P++VTYTT++  L   +  +    +  
Sbjct: 203 VVSYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQ 262

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G+ PD+  +N +I+ +   G  +E +    +M   GL P   TY +L+      G
Sbjct: 263 QMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNG 322

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+    D M R+G +KPN+  Y +L+  +  +  ++E  ++++ M  +G+ PD   +
Sbjct: 323 RCREARFFFDSMIRKG-IKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRFARTMK 310
           N I TAYA+    D+A  +  +M+  G+ P+    G +I   CK G++ +A L+F + M 
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E GV PN+ +FN L+ G   +   +   E    M    + PDV+ ++TI+    T G + 
Sbjct: 442 E-GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K + + D M + G +PD  +Y+ L  G+      ++A + L  M+  G  P+   + T++
Sbjct: 501 KAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
            G+C  G +D A  VF +M  +G++P + T+ T++ G    R+   A+E+
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKEL 610



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 190/392 (48%), Gaps = 9/392 (2%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL + L+   +P    A FN+L+    + S    +T  + L +     S+ + M +    
Sbjct: 35  KLFDGLLTHARPASIIA-FNHLLTAVSRVSGRRSSTTESELVV-----SLFNRMIRECTI 88

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            + PD   ++ +I  F   G +E    TF  + +SG        N L+KG   A +  E+
Sbjct: 89  KVTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREA 148

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK---PDVVTYNT 253
           + +L     E    P++ +YN L++ +CNEK   EA  ++H MA S  +   P+VV+Y T
Sbjct: 149 MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAT 208

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +   G+ D+A  + +EM   G+QPN  T   +I G CK   +  A    + M + G
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V P+   +N LI G++ I     V  +L  M    + PD  TY +++N     G   + +
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
             FD M + GIKP+   Y IL  GY  +    +  +LL  M+E+G  P+  IF  I + +
Sbjct: 329 FFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
                +D A+ +F+KM + G+SP++  F  L+
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNFGALI 420



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 174/382 (45%), Gaps = 11/382 (2%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            EA  IFN + + G  P +V +  L+ AL    R +      +Q+   G+ P+   FN++
Sbjct: 395 DEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL 454

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           +         E+A + +++M   G+ P    +NT++      G+  ++ +L+DLM R G 
Sbjct: 455 VYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGT 514

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            +P++ +Y  L+   C    I EA   +  M + G+KPD  TYNT+   Y + G  D A 
Sbjct: 515 -RPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAY 573

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            V  EM  NG+ P   T   I+ G     +  EA      M   G   N+ I+N+++ G 
Sbjct: 574 GVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGL 633

Query: 329 VEIMDRDGVDEVLALM-----KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
            +    + VDE   L      K+F++  ++ T++ ++ A   +G  +    +F  +   G
Sbjct: 634 SK---NNCVDEAFKLFQSLCSKDFQL--EITTFNIMIGALFKSGRNEDAMHLFATISSYG 688

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           + PD   Y ++A+  + E   E+ ++L   M +SG  PN  +   ++      G + RA 
Sbjct: 689 LVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAG 748

Query: 444 EVFDKMCEHGVSPNLKTFETLM 465
               K+ E   S    T   L+
Sbjct: 749 AYLSKLDEKNFSLEASTTAMLI 770



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 86/348 (24%), Positives = 164/348 (47%), Gaps = 1/348 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+++L + G+  +A   FN ++  G  P++  + +L+  L    ++        
Sbjct: 413 VVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYF 472

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD +FFN ++      G + +A      M+  G  P   +Y TLI G+ + G
Sbjct: 473 EMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVG 532

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+ K LD+M   G +KP+  TYN L+  +C    I +A+ V  +M  +G+ P VVTY
Sbjct: 533 RIDEAAKSLDVMLSVG-LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTY 591

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +TI           +A+E+ + M  +G Q N     II++G  K   + EA +  +++  
Sbjct: 592 STILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCS 651

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
                 +  FN++I    +    +    + A +  + + PDV TY  I       G++++
Sbjct: 652 KDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEE 711

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
             ++F  M K+G  P++   + L +  +   +  +A   L  + E  F
Sbjct: 712 FDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLSKLDEKNF 759



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 164/358 (45%), Gaps = 13/358 (3%)

Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA 232
           +TP   TY+ LI  +   G+ E       L+ + G    N+   N L++  C+ K + EA
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNI-VINQLLKGLCDAKRLREA 148

Query: 233 WNVMHK-MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC----- 286
            +++ K M   G  PDVV+YNT+   +     A++A    +E+ H      GR+C     
Sbjct: 149 MDILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEA----LELLHMMADSQGRSCPPNVV 204

Query: 287 --GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
               +I+G+  EG++ +A      M + G+ PN+V +  +I G  +    D  + V   M
Sbjct: 205 SYATVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQM 264

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            +  V PD  TY+ +++ + + G   +   + ++M   G+KPD + Y  L          
Sbjct: 265 IDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRC 324

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            +A     +MI  G  PNV I+  +I G+ + G++    ++ + M E+G+SP+   F  +
Sbjct: 325 REARFFFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNII 384

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              Y++      A  I   MK  G+ P    F  L +A    G   +A    +++ N+
Sbjct: 385 FTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNE 442


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 213/405 (52%), Gaps = 17/405 (4%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A ++FN L++    P  + +  +L +L   K ++++  +  ++E  G+ P+ +  N +I
Sbjct: 45  DAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILI 104

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG----------YGIAGKPEESVKL 199
           N+F + G++  A     K+ + G  P T T NTLIKG          + I GK +++V L
Sbjct: 105 NSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDL 164

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
            + M  E N+ P++ T+ +LV  +C E  + EA NV+  M   G+KP VVTYN++   Y 
Sbjct: 165 FNKMILE-NINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYF 223

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
              + ++A+ +   M   GV P+ ++  I+I+G+CK   + EA+   + M    + PN+V
Sbjct: 224 LVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVV 283

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIF 376
            ++ LI G  +      +   L L+ E       P+++TYS+I++A      +D    + 
Sbjct: 284 TYSSLIDGLCK---SGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALL 340

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             M   GI+P+ + Y+IL KG  +  + E A ++   ++  G + NV  +T +I G+C  
Sbjct: 341 TQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDK 400

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           G  D A+ +  KM ++G  PN KT+E ++    +  +   AE++L
Sbjct: 401 GLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLL 445



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 184/371 (49%), Gaps = 11/371 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE-- 135
           L+NS  + G    A ++   +++ G+KP+ +T  TL+  L +  + +  H I+ ++++  
Sbjct: 103 LINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAV 162

Query: 136 --------NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
                     ++PD   F  +++ F + G ++EA +    M   G+ P   TYN+L+ GY
Sbjct: 163 DLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGY 222

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
            +  +  ++  + + M++ G V P++++Y++L+  +C  K + EA  ++ +M    + P+
Sbjct: 223 FLVKQVNKAKSIFNTMAQLG-VSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPN 281

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           VVTY+++     ++G+   A +++ EM   G  PN  T   I+   CK  ++  A+    
Sbjct: 282 VVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALLT 341

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            MK  G+ PN+  + +LIKG  +    +   +V   +     N +V TY+ ++  +   G
Sbjct: 342 QMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKG 401

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
             D+   +   M   G  P+A  Y I+     ++ E E AE+LL  MIE+ F   V +  
Sbjct: 402 LFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTN 461

Query: 428 TIISGWCSDGS 438
            +I+     GS
Sbjct: 462 DLIASIWVTGS 472



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 186/381 (48%), Gaps = 11/381 (2%)

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            F  + ++++A+  F ++ +   TP    +N ++ G  +  K   +V  L        +K
Sbjct: 36  TFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKIL-GSLVKSKHYHTVLYLSQKMEFRGIK 94

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ---- 266
           PNL   N+L+ ++C   +I  A++V+ K+   G KP+ +T NT+      NG+       
Sbjct: 95  PNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCI 154

Query: 267 ------AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
                 A ++  +M    + P+  T  I++ G+CKEG++KEA      M   G+ P +V 
Sbjct: 155 VGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVT 214

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           +N L+ G+  +   +    +   M +  V+PD+ +YS ++N +     MD+  E+  +M 
Sbjct: 215 YNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMH 274

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
              I P+   YS L  G  +  +   A +L+  M + G  PN+V +++I+   C +  +D
Sbjct: 275 HKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVD 334

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            AI +  +M   G+ PN+ T+  L+ G  ++ +   A ++ + +   G +    T+ ++ 
Sbjct: 335 NAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMI 394

Query: 501 EARRATGLTKEAKRILSKIKN 521
           +     GL  EA  +LSK+++
Sbjct: 395 QGFCDKGLFDEALTLLSKMED 415



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 150/296 (50%), Gaps = 2/296 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++   + G+ +EA+ +   ++  G KP +VTY +L+    + K+ N   SI +
Sbjct: 177 VYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFN 236

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G+ PD   ++ +IN F +   M+EAM+   +M    + P   TY++LI G   +G
Sbjct: 237 TMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSG 296

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K   ++KL+D M   G   PN+ TY+ ++ A C    +  A  ++ +M   G++P++ TY
Sbjct: 297 KISYALKLVDEMHDRGQ-PPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTY 355

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     Q+G+ + A +V  ++   G   N  T  ++I G+C +G   EAL     M++
Sbjct: 356 TILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMED 415

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV-ITYSTIMNAWSTA 366
            G  PN   + ++I    +  + +  +++L  M E   +  V +T   I + W T 
Sbjct: 416 NGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTG 471



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 132/286 (46%), Gaps = 10/286 (3%)

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           + + Y + +T +  N + D A  +   +      P       I+    K       L  +
Sbjct: 26  NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLS 85

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
           + M+  G+ PNLV  N+LI  F ++        VL  + +    P+ IT +T++      
Sbjct: 86  QKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLN 145

Query: 367 G-------FMDKCK---EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           G        + K K   ++F+ M    I PD + ++IL  G+ +E   ++A+ +L  M+ 
Sbjct: 146 GKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMI 205

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G  P VV + +++ G+     +++A  +F+ M + GVSP+++++  L+ G+ + +    
Sbjct: 206 QGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDE 265

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           A E+L+ M    + P   T+  L +    +G    A +++ ++ ++
Sbjct: 266 AMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDR 311



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/159 (24%), Positives = 84/159 (52%), Gaps = 1/159 (0%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           +K+    V + + L++ L + GK   A  + + + + G  P++VTY+++L AL    + +
Sbjct: 275 HKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVD 334

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           +  ++++Q++  G+ P+   +  +I    +SG +E+A   F  +   G      TY  +I
Sbjct: 335 NAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMI 394

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
           +G+   G  +E++ LL  M   G + PN +TY +++ + 
Sbjct: 395 QGFCDKGLFDEALTLLSKMEDNGCI-PNAKTYEIIILSL 432


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 216/418 (51%), Gaps = 7/418 (1%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           +T LM  L  +G+ +++    + ++  G + + V+Y TLL  L           ++  +E
Sbjct: 205 LTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIE 264

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           +    PD + +N +I+   +   + EA D + +M   G+ P   TY+TLI G+ +AG+  
Sbjct: 265 DRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLM 324

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            +  LL+ M+ + N+ P++ TY +L+ A C E  + EA N++  M   G+KP+VVTY+T+
Sbjct: 325 GAFSLLNEMTLK-NINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTL 383

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              Y   GE   A+++   M    V P+  +  I+I+G CK   + EA+   R M    V
Sbjct: 384 MDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNV 443

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF--RVNP-DVITYSTIMNAWSTAGFMDK 371
            PN V +N LI G  +      +   L LMKE   R  P DVITY+++++       +DK
Sbjct: 444 VPNTVTYNSLIDGLCK---SGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDK 500

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F  M + GI+P+ + Y+ L  G  +    + A++L   ++  G   +V  +  +I 
Sbjct: 501 AIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIG 560

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           G C +G +D A+ +  KM ++G  P+  TFE ++    E  +  +AE++L  M A G+
Sbjct: 561 GLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 618



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 220/467 (47%), Gaps = 34/467 (7%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            +A + FN ++   + PS++ +  +L +L   K F +  S+  Q+E  G++PD +  + +
Sbjct: 114 HDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSIL 173

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG- 207
           IN F   G M  +     K+ + G  P T    TL+KG  + G+ ++S+   D +  +G 
Sbjct: 174 INCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGF 233

Query: 208 ---------------------------------NVKPNLRTYNVLVRAWCNEKNITEAWN 234
                                            + +P++  YN ++   C +K + EA++
Sbjct: 234 QMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYD 293

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
              +M + G+ PDV+TY+T+   +   G+   A  ++ EM    + P+  T  I+I   C
Sbjct: 294 FYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALC 353

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           KEGK+KEA      M + GV PN+V ++ L+ G+  + +     ++   M +  VNP V 
Sbjct: 354 KEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVC 413

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           +Y+ ++N       +D+   +  +M    + P+   Y+ L  G  +      A +L+  +
Sbjct: 414 SYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKEL 473

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
              G   +V+ +T+++ G C + ++D+AI +F KM E G+ PN  T+  L+ G  +  + 
Sbjct: 474 HHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARL 533

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             A+++ Q +   G      T+ ++       G+  EA  + SK+++
Sbjct: 534 KNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMED 580


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/511 (26%), Positives = 244/511 (47%), Gaps = 84/511 (16%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL----------AALTIQK 121
           V + T LMN L   G+  EA A+ + ++E G +P+ +TY T++          +AL + +
Sbjct: 179 VVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 238

Query: 122 RFNSIHSIMSQV--------------------------------EENGMDPDSIFFNAVI 149
           +   +  I   V                                E   + PD + +NA+I
Sbjct: 239 KMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALI 298

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           NAF + G   EA + + +M   G+ P+T TY+++I G+    + + +  +  LM+ +G  
Sbjct: 299 NAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKG-C 357

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            P++ T+N L+  +C  K + +   ++H+M  +G+  + +TY T+   + Q G+ + A++
Sbjct: 358 SPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQD 417

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV-----HPNLVIFNLL 324
           ++ EM  +GV PN  TC  ++ G C  GK+K+AL   + M++  +     HP    FN  
Sbjct: 418 LLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHP----FN-- 471

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
                                   V PDV TY+ +++     G   + +E++++M   GI
Sbjct: 472 -----------------------GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGI 508

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            PD   Y+ +  G  ++   ++A ++  +M    F PNVV FTT+I+G+C  G +D  +E
Sbjct: 509 VPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLE 568

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           +F +M   G+  N  T+ TL+ G+ +      A +I Q M A GV+P   T         
Sbjct: 569 LFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITI-----RNM 623

Query: 505 ATGL--TKEAKRILSKIKNKERTNEMEAEED 533
            TGL   +E KR ++ +++ + +   + E++
Sbjct: 624 LTGLWSKEELKRAVAMLEDLQMSVGYQLEDE 654



 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 221/454 (48%), Gaps = 21/454 (4%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV + + L++ L    +  EA  +F+ +     KP++VT+TTL+  L  + R     +++
Sbjct: 147 TVVTFSTLLHGLCVEDRISEALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALL 202

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE-SGLTPTTSTY-----NTLI 184
            ++ E+G+ P+ I +  +++   + G+   A++   KM+E S + P    +       +I
Sbjct: 203 DRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMI 262

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G+  +G+  E+ +LL  M     + P++ TYN L+ A+  E    EA  +  +M   G+
Sbjct: 263 NGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGI 322

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P  +TY+++   + +    D AE +   M   G  P+  T   +I+GYC+  ++ + ++
Sbjct: 323 IPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIK 382

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               M E G+  N + +  LI GF ++ D +   ++L  M    V P+V+T +T+++   
Sbjct: 383 LLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLC 442

Query: 365 TAGFMDKCKEIFDDMGKA-----------GIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
             G +    E+F  M K+           G++PD   Y+IL  G + E +  +AEEL   
Sbjct: 443 DNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEE 502

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M   G  P+ + + ++I G C    +D A ++FD M     SPN+ TF TL+ GY +A +
Sbjct: 503 MPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGR 562

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
                E+   M   G+     T++ L    R  G
Sbjct: 563 VDDGLELFCEMGRRGIVANAITYITLIHGFRKVG 596



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 217/457 (47%), Gaps = 32/457 (7%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL +   E    ++A  +F +++     PS++ +  L+  +    R + + S+  ++E  
Sbjct: 48  KLRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEMR 107

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            +  ++  F  ++  F     +  A+ TF K+ + G  PT  T++TL+ G  +  +  E+
Sbjct: 108 RVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEA 167

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + L   M      KPN+ T+  L+   C E  + EA  ++ +M   G++P+ +TY TI  
Sbjct: 168 LDLFHQMC-----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD 222

Query: 257 AYAQNGEADQAEEVIVEMEH-NGVQPN-------GRTCGIIISGYCKEGKIKEALRFART 308
              + G+   A  ++ +ME  + ++PN        RTC  +I+G+C  G+  EA +  + 
Sbjct: 223 GMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTC--MINGFCSSGRWSEAQQLLQE 280

Query: 309 MKEY-GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
           M E   + P++V +N LI  FV+       +E+   M    + P  ITYS++++ +    
Sbjct: 281 MLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQN 340

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +D  + +F  M   G  PD   ++ L  GY R +  +   +LL  M E+G   N + +T
Sbjct: 341 RLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYT 400

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T+I G+C  G ++ A ++  +M   GV PN+ T  TL+ G  +  +   A E+ + M+  
Sbjct: 401 TLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKS 460

Query: 488 -----------GVHPQKSTFLLLAEARRATGLTKEAK 513
                      GV P   T+ +L      +GL  E K
Sbjct: 461 KMDIDASHPFNGVEPDVQTYNIL-----ISGLINEGK 492


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 228/457 (49%), Gaps = 15/457 (3%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L+    + G  ++A A+F  ++    +P ++T+  L+  L    +  +   I+  +   G
Sbjct: 573  LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLG 632

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            + P+ + +NA+++   +SG +EEA     +M  SG  P + TY +L+     A + ++++
Sbjct: 633  VPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDAL 692

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L+  +   G   P+  TYN+LV          +A  V+ +M   G  PDVVTYNT+  +
Sbjct: 693  QLVSELKSFG-WDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDS 751

Query: 258  YAQNGEADQAEEVIVEMEHN---GVQPNGRTCGIIISGYCKEGKIKEALRFARTM--KEY 312
              + G+ ++A  +  +M         PN  T  ++I+G CK G+I EA    + M  K  
Sbjct: 752  LCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSC 811

Query: 313  GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR-----VNPDVITYSTIMNAWSTAG 367
             V PN++ +N  + G  +   +  + E   LM+  R     V+PD +T+ST+++     G
Sbjct: 812  DVLPNIITYNSFLDGLCK---QSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCG 868

Query: 368  FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
              D+   +FDDM   G  P+   Y++L  G  +  + E+A  ++ +M++ G  P+V+ ++
Sbjct: 869  QTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYS 928

Query: 428  TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA- 486
             ++  +C    +D A+E+   M   G +PN+ TF +++ G  ++ Q   A ++   M   
Sbjct: 929  VLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLK 988

Query: 487  FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
             G+ P K T+  L +    TG   +A+ +L  + + +
Sbjct: 989  HGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAMPDPD 1025



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 217/449 (48%), Gaps = 9/449 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNN-LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           ++ SL   G+   A  IF   +   G  P++VTY T++  L       +   +  ++ E 
Sbjct: 186 VLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVER 245

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  PD + +N +I++  ++G++EEA      M      P   TY+ LI G    G+ +E+
Sbjct: 246 GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEA 305

Query: 197 VKLLDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK--PDVVTYNT 253
            +L+  M+R+  +V PN+ TYN  +   C +    EA  +M  +    ++  PD VT++T
Sbjct: 306 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 365

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G+ D+A  V  +M   G  PN  T   +++G CK  K++ A     +M + G
Sbjct: 366 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 425

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V P+++ +++L+  F +    D   E+L  M      P+V+T+++I++    +    +  
Sbjct: 426 VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAF 485

Query: 374 EIFDDMG-KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           ++FDDM  K G+ PD   Y  L  G  R     +AE LL  M +    P+   F   I+G
Sbjct: 486 QMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPD----PDTYAFNCCING 541

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
               G + RA++V+++M E  + P+  TF  L+ G  +A    +A  + + M A  + P 
Sbjct: 542 LSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 601

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKN 521
             TF  L +     G  + A+ IL  + N
Sbjct: 602 VMTFGALIDGLCKAGQVEAARDILDLMGN 630



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 129/519 (24%), Positives = 243/519 (46%), Gaps = 25/519 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNL-IEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           V +   +++ L +  +  EA  +F+++ ++ G  P  +TY TL+  L    R     +++
Sbjct: 465 VVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALL 524

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +     DPD+  FN  IN  S+ G++  A+  + +M E  L P   T+N LI G   A
Sbjct: 525 DAMP----DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKA 580

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E++  L + M  + N++P++ T+  L+   C    +  A +++  M   G+ P+VVT
Sbjct: 581 GNFEQASALFEEMVAK-NLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 639

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +     ++G  ++A + + EM  +G  P+  T G ++   C+  +  +AL+    +K
Sbjct: 640 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 699

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            +G  P+ V +N+L+ G  +    +    VL  M     +PDV+TY+T++++   AG ++
Sbjct: 700 SFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLE 759

Query: 371 KCKEIFDDMGKAGIK---PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH--PNVVI 425
           + + +  DM     +   P+   YS+L  G  +    ++A EL+  M+       PN++ 
Sbjct: 760 EARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIIT 819

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHG--VSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           + + + G C    M  A E+   + +    VSP+  TF TL+ G  +  Q   A  +   
Sbjct: 820 YNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDD 879

Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP-------- 535
           M A G  P   T+ +L      T   + A  ++  + +K  T ++     +         
Sbjct: 880 MIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASH 939

Query: 536 VESLERLYHKEATTASYPNLLQIPNVVS----SDQKGSA 570
           V+    L H  A+    PN++   +++     SDQ G A
Sbjct: 940 VDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEA 978



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 110/480 (22%), Positives = 224/480 (46%), Gaps = 21/480 (4%)

Query: 60  CSFCMNKESCRTVRSM--------------TKLMNSLIERGKPQEAQAIFNNLIEGGHKP 105
           C   M  E+C  +RS+              + L++ L + G+  EA ++F+++I GG+ P
Sbjct: 334 CKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVP 393

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
           +++TY  L+  L    +    H+++  + + G+ PD I ++ +++AF ++  ++EA++  
Sbjct: 394 NVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 453

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
             M   G TP   T+N++I G   + +  E+ ++ D M+ +  + P+  TY  L+     
Sbjct: 454 HGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFR 513

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
                +A  ++  M      PD   +N      ++ G+  +A +V   M    + P+  T
Sbjct: 514 TGRAGQAEALLDAMP----DPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVT 569

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
             I+I+G CK G  ++A      M    + P+++ F  LI G  +    +   ++L LM 
Sbjct: 570 FNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMG 629

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
              V P+V+TY+ +++    +G +++  +  ++M  +G  PD+  Y  L     R    +
Sbjct: 630 NLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTD 689

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
            A +L+  +   G+ P+ V +  ++ G    G  ++AI V ++M   G  P++ T+ TL+
Sbjct: 690 DALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLI 749

Query: 466 WGYSEARQPWRAEEILQIMK---AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
               +A     A  +   M    +    P   T+ +L       G   EA+ ++ ++  K
Sbjct: 750 DSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRK 809



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 200/422 (47%), Gaps = 10/422 (2%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
            T+ S  K +N L++ G P +A  +F + +    +P+  TY+TLL A    K    +   
Sbjct: 109 HTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRA--TYKAGGDVERT 166

Query: 130 MSQVEENGMDPDSIF-FNAVINAFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLIKGY 187
           +           S+  +N V+ +   +G    A++ F  +M   G+ PT  TYNT+I G 
Sbjct: 167 LGFFRRIRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGL 226

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
             + +    ++L + +   G+  P++ TYN L+ + C   ++ EA  +   M++    P+
Sbjct: 227 CKSNELGAGMELFEELVERGH-HPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPN 285

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNG--VQPNGRTCGIIISGYCKEGKIKEALRF 305
           VVTY+ +     + G  D+A E+I EM      V PN  T    + G CK+    EA   
Sbjct: 286 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 345

Query: 306 ARTMKE--YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
            R++++    V P+ V F+ LI G  +    D    V   M      P+VITY+ ++N  
Sbjct: 346 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGL 405

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
             A  M++   + + M   G+ PD   YS+L   + +    ++A ELL  M   G  PNV
Sbjct: 406 CKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNV 465

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           V F +II G C       A ++FD M  +HG+ P+  T+ TL+ G     +  +AE +L 
Sbjct: 466 VTFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLD 525

Query: 483 IM 484
            M
Sbjct: 526 AM 527



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 210/472 (44%), Gaps = 70/472 (14%)

Query: 72   VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
            V +   L++ L + G+ +EA      ++  G  P  +TY +L+ AL    R +    ++S
Sbjct: 637  VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 696

Query: 132  QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +++  G DPD++ +N +++   +SG  E+A+    +M   G  P   TYNTLI     AG
Sbjct: 697  ELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAG 756

Query: 192  KPEESVKL---------------------------------------LDLMSREGNVKPN 212
              EE+ +L                                        ++M +  +V PN
Sbjct: 757  DLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPN 816

Query: 213  LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK--PDVVTYNTIATAYAQNGEADQAEEV 270
            + TYN  +   C +  + EA  +M  +    ++  PD VT++T+     + G+ D+A  V
Sbjct: 817  IITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNV 876

Query: 271  IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
              +M   G  PN  T  ++++G CK  K++ A     +M + GV P+++ +++L+  F +
Sbjct: 877  FDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCK 936

Query: 331  IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG-KAGIKPDAH 389
                D   E+L  M      P+V+T+++I++    +    +  ++FDDM  K G+ PD  
Sbjct: 937  ASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKI 996

Query: 390  AYSILAKGYVREQEPEKAEELLMTM--------------------IESGFH--------P 421
             Y  L  G  R     +AE LL  M                    +    H        P
Sbjct: 997  TYCTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVP 1056

Query: 422  NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
            + V F  +I+G C  G+ ++A  +F++M    + P++ TF  L+ G  +A Q
Sbjct: 1057 DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQ 1108



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 87/345 (25%), Positives = 167/345 (48%), Gaps = 13/345 (3%)

Query: 72   VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHK--PSLVTYTTLLAALTIQKRFNSIHSI 129
            V + + L+N L + G+  EA+ +   ++       P+++TY + L  L  Q        +
Sbjct: 780  VVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACEL 839

Query: 130  MSQVEENGM--DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            M  + +  +   PD++ F+ +I+   + G  +EA + F  M   G  P   TYN L+ G 
Sbjct: 840  MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGL 899

Query: 188  GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
                K E +  +++ M  +G V P++ TY+VLV A+C   ++ EA  ++H MA+ G  P+
Sbjct: 900  CKTDKMERAHAMIESMVDKG-VTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPN 958

Query: 248  VVTYNTIATAYAQNGEADQAEEVIVEME-HNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
            VVT+N+I     ++ ++ +A ++  +M   +G+ P+  T   +I G  + G   +A    
Sbjct: 959  VVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLL 1018

Query: 307  RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
              M +    P+   FN  I G  ++ D   V   L  M E  + PD +T++ ++     A
Sbjct: 1019 DAMPD----PDTYAFNCCINGLSKLGD---VSRALHRMLELELVPDKVTFNILIAGACKA 1071

Query: 367  GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
            G  ++   +F++M    ++PD   +  L  G  +  + E   +++
Sbjct: 1072 GNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 70/283 (24%), Positives = 135/283 (47%), Gaps = 42/283 (14%)

Query: 60   CSFCMNKESCRTVRSM--------------TKLMNSLIERGKPQEAQAIFNNLIEGGHKP 105
            C   M  E+C  +RS+              + L++ L + G+  EA  +F+++I GG+ P
Sbjct: 828  CKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVP 887

Query: 106  SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
            ++VTY  L+  L    +    H+++  + + G+ PD I ++ +++AF ++ +++EA++  
Sbjct: 888  NVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELL 947

Query: 166  WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV----- 220
              M   G TP   T+N++I G   + +  E+ ++ D M+ +  + P+  TY  L+     
Sbjct: 948  HGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFR 1007

Query: 221  RAWCNEKNI---------TEAWNV--------------MHKMAASGMKPDVVTYNTIATA 257
              W  +  +         T A+N               +H+M    + PD VT+N +   
Sbjct: 1008 TGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAG 1067

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
              + G  +QA  +  EM    +QP+  T G +I G CK G+++
Sbjct: 1068 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVE 1110



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/312 (24%), Positives = 133/312 (42%), Gaps = 23/312 (7%)

Query: 288 IIISGYCKEGKIKEALRFAR-TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
           I++   C+ G+   AL   R  M   GV P +V +N +I G  +  +     E+   + E
Sbjct: 185 IVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVE 244

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
              +PDV+TY+T++++   AG +++ + +  DM      P+   YS+L  G  +    ++
Sbjct: 245 RGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDE 304

Query: 407 AEELL--MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG--VSPNLKTFE 462
           A EL+  MT       PN++ + + + G C       A E+   + +    VSP+  TF 
Sbjct: 305 ARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFS 364

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           TL+ G  +  Q   A  +   M A G  P   T+  L          + A  ++  + +K
Sbjct: 365 TLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDK 424

Query: 523 ERTNEMEAEEDIP--------VESLERLYHKEATTASYPNLLQIPNVVS----SDQKGSA 570
             T ++     +         V+    L H  A+    PN++   +++     SD+ G A
Sbjct: 425 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEA 484

Query: 571 ------AALKKG 576
                  ALK G
Sbjct: 485 FQMFDDMALKHG 496


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 224/452 (49%), Gaps = 45/452 (9%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +++ L N L    +  EA A    ++  G+ P++VTYTTL+  L ++ R +    +  ++
Sbjct: 128 TLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRM 187

Query: 134 EENGMDPDSIFFNAVINAFSESGNM----------------------------------- 158
           ++ G  P+++ +  +I    ++GN+                                   
Sbjct: 188 QKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGL 247

Query: 159 ------EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
                 +EA + F +MK  G+ P   +Y+TLI G+  AGK ++S  L D M  +G V+P+
Sbjct: 248 CKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQG-VQPD 306

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
           + T++VL+   C E  +TEA  ++  M   G+ P+++TYN++   +   G+ + A E+ +
Sbjct: 307 MVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFL 366

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
            M   G++P+  +   +I+GYCK  K+KEA+     M + G  PN+  +  L+KG  +  
Sbjct: 367 SMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKG 426

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
                 ++  +MK + V+ +   Y   ++       + +  E+F+++     K +   YS
Sbjct: 427 KVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYS 486

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            L  G  +  + E A EL   + + G  P+VV +  +I G+C  G +D A  +F+KM E+
Sbjct: 487 CLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEEN 546

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           G +P++  + TL+ G+ E     + EE+++++
Sbjct: 547 GCTPDIIAYNTLLCGFCEGN---KLEEVIKLL 575



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 232/496 (46%), Gaps = 13/496 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S  +L+  L +     +  +++N +   G  P L T + L   L    R +   + M+
Sbjct: 91  ISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMA 150

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  P+ + +  +I        + EA   F +M++ G TP   TY TLIKG    G
Sbjct: 151 GILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTG 210

Query: 192 KPEESVKL----LDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
               ++KL    L+  S+ G N KP + TY++++   C      EA  +  +M A GM P
Sbjct: 211 NVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIP 270

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           DV++Y+T+   +   G+ DQ++ +  EM   GVQP+  T  ++I   CKEGK+ EA +  
Sbjct: 271 DVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLL 330

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             M + G+ PNL+ +N LI GF  + D +   E+   M    + PD I+Y+T++N +   
Sbjct: 331 EVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKT 390

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             + +   ++++M + G  P+   Y  L KG  ++ +   A++L   M   G   N  I+
Sbjct: 391 WKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIY 450

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
              + G C +  +  A+E+F+++  +    N++ +  L+ G  +A +   A E+ + +  
Sbjct: 451 GIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQ 510

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI--------PVES 538
            G+ P   T+ ++       G    A  +  K++    T ++ A   +         +E 
Sbjct: 511 EGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEE 570

Query: 539 LERLYHKEATTASYPN 554
           + +L HK       PN
Sbjct: 571 VIKLLHKMVQKDVSPN 586



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 93/378 (24%), Positives = 184/378 (48%), Gaps = 1/378 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + +++ L + G+  EA+ +F  +   G  P +++Y+TL+       +++    +  
Sbjct: 237 VITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFD 296

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G+ PD + F+ +I+   + G + EA      M + G+ P   TYN+LI G+ + G
Sbjct: 297 EMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVG 356

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               + +L   M  +G ++P+  +Y  L+  +C    + EA N+ ++M   G  P+V TY
Sbjct: 357 DLNSARELFLSMPSKG-LEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTY 415

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+     Q G+   A+++   M+  GV  N +  GI + G CK   + EA+     +K 
Sbjct: 416 GTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKS 475

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           Y    N+  ++ LI G  +    +   E+   + +  + PDV+TY+ +++ +   G +D 
Sbjct: 476 YNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDN 535

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F+ M + G  PD  AY+ L  G+    + E+  +LL  M++    PN    T ++ 
Sbjct: 536 ANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVD 595

Query: 432 GWCSDGSMDRAIEVFDKM 449
             C D    + +++  K 
Sbjct: 596 MLCKDEKYKKFVDLLPKF 613



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/334 (26%), Positives = 162/334 (48%), Gaps = 13/334 (3%)

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++    DLM R   + P + ++N L+       + ++ +++ ++M  +G+ PD+ T + +
Sbjct: 74  QAFHFFDLMMRSHPIPP-ISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSIL 132

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
           A          +A   +  +   G  PN  T   +I G C E +I EA R    M++ G 
Sbjct: 133 ANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGC 192

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE-------FRVN--PDVITYSTIMNAWST 365
            PN V +  LIKG  +      V+  L L KE       + VN  P VITYS I++    
Sbjct: 193 TPNAVTYGTLIKGLCQ---TGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCK 249

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G  D+ KE+F++M   G+ PD  +YS L  G+    + ++++ L   M++ G  P++V 
Sbjct: 250 VGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVT 309

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           F+ +I   C +G +  A ++ + M + G+ PNL T+ +L+ G+        A E+   M 
Sbjct: 310 FSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMP 369

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           + G+ P + ++  L      T   KEA  + +++
Sbjct: 370 SKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEM 403



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 91/201 (45%), Gaps = 16/201 (7%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P + +++ ++   +      +   ++++M  AG+ PD    SILA          +A   
Sbjct: 89  PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           +  ++  G+ PNVV +TT+I G C +  +  A  +F +M + G +PN  T+ TL+ G  +
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ 208

Query: 471 ARQPWRA----EEILQIMKAFGVH--PQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
                 A    +E+L     +GV+  P   T+ ++ +     G   EAK +         
Sbjct: 209 TGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFE------- 261

Query: 525 TNEMEAEEDIP-VESLERLYH 544
             EM+A+  IP V S   L H
Sbjct: 262 --EMKAQGMIPDVISYSTLIH 280


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/448 (28%), Positives = 215/448 (47%), Gaps = 7/448 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L   GK  EA  +F+ +   G +P ++TY TL+  L      ++    +  +
Sbjct: 126 TFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSM 185

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+    P  + ++ +I++  +   + EA+  F  M   G++P   TY++LI G  I G  
Sbjct: 186 EQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHW 245

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+++L   M     + P+  T+N LV A C E  + +A  V+  M  S +KPDVVTYN+
Sbjct: 246 KEAIRLFYAMIHR-KIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNS 304

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +    E  +   V   M   G  P+  +   +I+GYCK   + +A+     M + G
Sbjct: 305 LMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQG 364

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMD 370
           + P+ V +N LI G   +     + + +AL  E  V    PD++TY  + +       + 
Sbjct: 365 LIPDTVTYNTLIHGLCHV---GRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLA 421

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +   +    + PD H YSI+  G  R  E E A +L   +   G HP+V  +T +I
Sbjct: 422 EAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMI 481

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G C  G +  A ++F +M E+G SPN  T+  +  G+    +  RA ++ Q M + G  
Sbjct: 482 NGLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFS 541

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSK 518
              ST  LL E     GL +  K+IL +
Sbjct: 542 IDVSTTTLLVEMLSDDGLDQSVKQILCE 569



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 215/433 (49%), Gaps = 1/433 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A ++FN ++     PS+V ++ LL ++T  K ++++ S+  Q++  G+  ++   N +I
Sbjct: 37  DALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILI 96

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N+F     +  A      + + G  P+T+T+ TLI+G  + GK  E+++L D M+ EG  
Sbjct: 97  NSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG-F 155

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +P++ TY  L+   C   N + A   +  M     +P VV Y+TI  +  ++ +  +A  
Sbjct: 156 QPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALS 215

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  +M   G+ PN  T   +I G C  G  KEA+R    M    + P+ + FN L+    
Sbjct: 216 LFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALC 275

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +         V+ +M +  + PDV+TY+++M+       M K   +FD M + G  P   
Sbjct: 276 KEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVI 335

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           +Y+ L  GY + Q  +KA  L   M + G  P+ V + T+I G C  G +  AI +F +M
Sbjct: 336 SYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEM 395

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
             +G  P+L T+  L     +  +   A  +L++++   + P    + ++ +     G  
Sbjct: 396 VVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGEL 455

Query: 510 KEAKRILSKIKNK 522
           + A+ + SK+ +K
Sbjct: 456 EAARDLFSKLSSK 468



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 202/389 (51%), Gaps = 5/389 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M + +CR TV   + +++SL +  +  EA ++F++++  G  P+  TY++L+  L I   
Sbjct: 185 MEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGH 244

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +     +   +    + PD + FN +++A  + G + +A      M +S L P   TYN+
Sbjct: 245 WKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNS 304

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ G+ +  +  ++V + D M R+G V P++ +Y  L+  +C  + + +A  +  +M+  
Sbjct: 305 LMDGHCLRSEMGKTVNVFDTMVRKGCV-PSVISYTTLINGYCKIQIMDKAMGLFEEMSQQ 363

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ PD VTYNT+       G    A  +  EM   G  P+  T  I+    CK  ++ EA
Sbjct: 364 GLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEA 423

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           +   + ++   + P++ I+++++ G     + +   ++ + +    ++PDV TY+ ++N 
Sbjct: 424 MVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMING 483

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G + +  ++F +M + G  P+A  Y+++ +G++R  E  +A +L   M+  GF  +
Sbjct: 484 LCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSID 543

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           V   TT++    SD  +D++++    +CE
Sbjct: 544 VST-TTLLVEMLSDDGLDQSVK--QILCE 569



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/358 (21%), Positives = 138/358 (38%), Gaps = 70/358 (19%)

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
           N   I +A ++ ++M      P +V ++ + T+  +         +  +M+  G+  N  
Sbjct: 31  NVNTIDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTY 90

Query: 285 TCGIIIS-----------------------------------GYCKEGKIKEALRFARTM 309
           T  I+I+                                   G C EGKI EAL+    M
Sbjct: 91  TLNILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKM 150

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G  P+++ +  LI G  ++ +       L  M++    P V+ YSTI+++      +
Sbjct: 151 TGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQL 210

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYV-----------------REQEPE------- 405
            +   +F DM   GI P+   YS L  G                   R+  P+       
Sbjct: 211 TEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTL 270

Query: 406 -----------KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
                      KA  ++  MI+S   P+VV + +++ G C    M + + VFD M   G 
Sbjct: 271 VDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGC 330

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            P++ ++ TL+ GY + +   +A  + + M   G+ P   T+  L       G  ++A
Sbjct: 331 VPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDA 388



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 95/225 (42%)

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           I +AL     M      P++V F+ L+     +     V  +   M  F +  +  T + 
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++N++     +     +  D+ K G +P    ++ L +G   E +  +A +L   M   G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
           F P+V+ + T+I+G C  G+   AI     M +    P +  + T++    + RQ   A 
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            +   M A G+ P   T+  L       G  KEA R+   + +++
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRK 259


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 224/445 (50%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++++ E+G   E   +   L   G +P +V+Y  +L  L + KR++ +  +M ++   G
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVG 243

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+   FN +I     +G  E+  +   +M E G TP    Y T+I G    G  E + 
Sbjct: 244 CPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVAN 303

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L  M   G +KPN+  YN +++  C+ +   EA +++ +M       D VT+N +   
Sbjct: 304 DILSRMPSYG-LKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDF 362

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + QNG  D+  E++ +M  +G  P+  T   +I+G+CKEG + EA+   + M   G  PN
Sbjct: 363 FCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPN 422

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + + +++KG           E+++ M +    P+ +T++T++N     G +++  E+  
Sbjct: 423 TISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLVEQAIELLK 482

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G  PD  +YS +  G  +  + E+A ELL  MI  G  PN +I++++ S    +G
Sbjct: 483 QMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREG 542

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
             D+ I++FD + +  V  +   +  ++    +  +  RA +    M + G  P +ST+ 
Sbjct: 543 RTDKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYT 602

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
           +L     + GL +EA+ +LS++ ++
Sbjct: 603 ILIRGLASEGLVREAQDLLSELCSR 627



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 213/444 (47%), Gaps = 1/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ SL  RG   +A  + + +   G   +      +L A      F S    +  +   G
Sbjct: 114 IVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAVRALQVLHAKG 173

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              DS   N V++A  E G ++E ++   K+   G  P   +YN ++KG  +A + ++  
Sbjct: 174 CTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVE 233

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+  M R G   PN+ T+N L+   C      +    + +M   G  PD+  Y TI   
Sbjct: 234 ELMVEMVRVG-CPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDLRMYATIIDG 292

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             ++G  + A +++  M   G++PN      ++ G C   + +EA      M +     +
Sbjct: 293 ICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLD 352

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V FN+L+  F +    D V E+L  M E    PDVITY+T++N +   G +D+   +  
Sbjct: 353 DVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLK 412

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G KP+  +Y+I+ KG  R +    A+EL+  MI+ G  PN V F T+I+  C  G
Sbjct: 413 NMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKG 472

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +++AIE+  +M  +G SP+L ++ T++ G  +A +   A E+L +M   G+ P    + 
Sbjct: 473 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYS 532

Query: 498 LLAEARRATGLTKEAKRILSKIKN 521
            +A A    G T +  ++   I++
Sbjct: 533 SMASALSREGRTDKIIQMFDSIQD 556



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 202/414 (48%), Gaps = 9/414 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   ++  L    +  + + +   ++  G  P++ T+ TL+A L     F  +H  +S
Sbjct: 213 IVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALS 272

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ E+G  PD   +  +I+   + G+ E A D   +M   GL P    YNT++KG   A 
Sbjct: 273 QMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAE 332

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE+  LL  M +E +   +  T+N+LV  +C    +     ++ +M   G  PDV+TY
Sbjct: 333 RWEEAEDLLAEMFQE-DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITY 391

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   + + G  D+A  ++  M   G +PN  +  I++ G C+  +  +A      M +
Sbjct: 392 TTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQ 451

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVN---PDVITYSTIMNAWSTAG 367
            G  PN V FN LI      M + G V++ + L+K+  VN   PD+I+YST+++    AG
Sbjct: 452 QGCLPNPVTFNTLIN----FMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 507

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
             ++  E+ + M   GI P+   YS +A    RE   +K  ++  ++ ++    +  ++ 
Sbjct: 508 KTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYN 567

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            +IS  C     DRAI+ F  M  +G  PN  T+  L+ G +       A+++L
Sbjct: 568 AVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLL 621



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/445 (21%), Positives = 204/445 (45%), Gaps = 7/445 (1%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           ++ L+ SL   G+  +A    +     G    +V Y  ++A      R   + +      
Sbjct: 47  LSALIRSLCAAGRTADAARALDT---AGDAAGVVAYNAMIAGYC---RAGQVAAARRLAA 100

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
              + P++  +  ++ +    G + +A+    +M   G   T    + +++     G   
Sbjct: 101 AVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            +V+ L ++  +G    +    N++V A C +  + E   ++ K+ + G +PD+V+YN +
Sbjct: 161 SAVRALQVLHAKGCTLDS-GNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAV 219

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                     D  EE++VEM   G  PN  T   +I+  C+ G  ++       M E+G 
Sbjct: 220 LKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGC 279

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P+L ++  +I G  +    +  +++L+ M  + + P+V+ Y+T++    +A   ++ ++
Sbjct: 280 TPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAED 339

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +  +M +     D   ++IL   + +    ++  ELL  M+E G  P+V+ +TT+I+G+C
Sbjct: 340 LLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFC 399

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +G +D A+ +   M   G  PN  ++  ++ G   A +   A+E++  M   G  P   
Sbjct: 400 KEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPV 459

Query: 495 TFLLLAEARRATGLTKEAKRILSKI 519
           TF  L       GL ++A  +L ++
Sbjct: 460 TFNTLINFMCKKGLVEQAIELLKQM 484



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 78/147 (53%), Gaps = 1/147 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + +++ L + GK +EA  + N +I  G  P+ + Y+++ +AL+ + R + I  +   +
Sbjct: 495 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSI 554

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++  +  D+  +NAVI++  +    + A+D F  M  +G  P  STY  LI+G    G  
Sbjct: 555 QDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLV 614

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVL 219
            E+  LL +L SR    K  +R + ++
Sbjct: 615 REAQDLLSELCSRRAVRKHLVRHFGIV 641


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 222/445 (49%), Gaps = 13/445 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T LMN L   G+  EA A+ + ++E G +P+ +TY T++  +       S  +++ 
Sbjct: 182 VVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 241

Query: 132 QVEE-NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           ++EE + + P+ + +N +I+   + G   +A + F +M+E  + P   TYN +I G+ I+
Sbjct: 242 KMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCIS 301

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+  ++ +LL  M  E  + P++ T++ L+ A+  E    EA  +  +M    + P  VT
Sbjct: 302 GRWSDAEQLLQEM-LERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVT 360

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+++   + +    D AE +       G  P+  T   +I+GYC+  ++ + ++    M 
Sbjct: 361 YSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMT 420

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G+  N + +  LI GF ++ D +   ++L  M    V P+V+T +T+++     G + 
Sbjct: 421 EAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLK 480

Query: 371 KCKEIFDDMGKA-----------GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
              E+F  M K+           G++PD   Y+IL  G + E +  +AEEL   M   G 
Sbjct: 481 DALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGI 540

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            P+ + ++++I G C    +D A ++FD M     SP++ TF TL+ GY +A       E
Sbjct: 541 VPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGLE 600

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARR 504
           +   M   G+     T++ L    R
Sbjct: 601 LFCEMGQRGIVADAITYITLIYGFR 625



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 216/419 (51%), Gaps = 27/419 (6%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L + G+  +A  +F  + E    P +VTY  ++    I  R++    ++ ++ E  
Sbjct: 259 IIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERK 318

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++PD + F+A+INAF + G   EA + + +M    + P+T TY+++I G+    + + + 
Sbjct: 319 INPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAE 378

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +  L   +G   P++ T+N L+  +C  K + +   ++H+M  +G+  + +TY T+   
Sbjct: 379 HMFYLTPTKG-CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHG 437

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + Q G+ + A++++ EM  +GV PN  TC  ++ G C  GK+K+AL   + M++      
Sbjct: 438 FCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQK------ 491

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR-VNPDVITYSTIMNAWSTAGFMDKCKEIF 376
                         MD D         + F  V PDV TY+ ++      G   + +E++
Sbjct: 492 ------------SKMDIDAS-------RPFNGVEPDVQTYNILICGLINEGKFLEAEELY 532

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M   GI PD   YS +  G  ++   ++A ++  +M    F P+VV F T+I+G+C  
Sbjct: 533 EEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKA 592

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           G +D  +E+F +M + G+  +  T+ TL++G+ +      A +I Q M + GV+P   T
Sbjct: 593 GMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDGALDIFQEMISSGVYPDTIT 651



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/465 (25%), Positives = 225/465 (48%), Gaps = 10/465 (2%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL +   E     +A  +F  ++     PS++ +  L+  +    R + + S+  ++E  
Sbjct: 51  KLQSGFHEIKGLDDAIDLFGYMVRSRPLPSVIDFCKLMGVVVRMGRPDVVISLHKKMEML 110

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            M  ++  F  ++  F     +  A+ TF K+ + G  PT  T+NTL+ G  +  +  E+
Sbjct: 111 RMPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEA 170

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + L   M      KPN+ T+  L+   C E  + EA  ++ +M   G++P+ +TY TI  
Sbjct: 171 LDLFHQMC-----KPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD 225

Query: 257 AYAQNGEADQAEEVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              + G+   A  ++ +ME  + + PN      II G  K+G+  +A      M+E  + 
Sbjct: 226 GMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIF 285

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++V +N +I GF         +++L  M E ++NPDV+T+S ++NA+   G   + +E+
Sbjct: 286 PDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEEL 345

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           +D+M    I P    YS +  G+ ++   + AE +       G  P+++ F T+I+G+C 
Sbjct: 346 YDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCR 405

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              +D  I++  +M E G+  N  T+ TL+ G+ +      A+++LQ M + GV P   T
Sbjct: 406 AKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVT 465

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLE 540
              L +     G  K+A  +   ++     ++M+ +   P   +E
Sbjct: 466 CNTLLDGLCDNGKLKDALEMFKAMQK----SKMDIDASRPFNGVE 506



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 215/451 (47%), Gaps = 20/451 (4%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T LM       K   A + F  + + G  P++VT+ TLL  L ++ R +    +  Q+
Sbjct: 118 SFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQM 177

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            +    P+ + F  ++N     G + EA+    +M E GL P   TY T++ G    G  
Sbjct: 178 CK----PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDT 233

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             ++ LL  M    ++ PN+  YN ++     +   ++A N+  +M    + PD+VTYN 
Sbjct: 234 VSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNC 293

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +  +G    AE+++ EM    + P+  T   +I+ + KEGK  EA      M    
Sbjct: 294 MINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRS 353

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P+ V ++ +I GF +    D  + +  L      +PD+IT++T++  +  A  +D   
Sbjct: 354 IIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGI 413

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           ++  +M +AG+  +   Y+ L  G+ +  +   A++LL  MI SG  PNVV   T++ G 
Sbjct: 414 KLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGL 473

Query: 434 CSDGSMDRAIEVFDKMCE-----------HGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           C +G +  A+E+F  M +           +GV P+++T+  L+ G     +   AEE+ +
Sbjct: 474 CDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYE 533

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            M   G+ P   T+     +    GL K+++
Sbjct: 534 EMPHRGIVPDTITY-----SSMIDGLCKQSR 559



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 171/352 (48%), Gaps = 14/352 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+N+ ++ GK  EA+ +++ ++     PS VTY++++     Q R ++   +  
Sbjct: 323 VVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFY 382

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
                G  PD I FN +I  +  +  +++ +    +M E+GL   T TY TLI G+   G
Sbjct: 383 LTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVG 442

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS--------- 242
               +  LL  M   G V PN+ T N L+   C+   + +A  +   M  S         
Sbjct: 443 DLNAAQDLLQEMISSG-VCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRP 501

Query: 243 --GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
             G++PDV TYN +       G+  +AEE+  EM H G+ P+  T   +I G CK+ ++ 
Sbjct: 502 FNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLD 561

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEI-MDRDGVDEVLALMKEFRVNPDVITYSTI 359
           EA +   +M      P++V FN LI G+ +  M  DG+ E+   M +  +  D ITY T+
Sbjct: 562 EATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDDGL-ELFCEMGQRGIVADAITYITL 620

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           +  +     +D   +IF +M  +G+ PD      +  G   ++E E+A  +L
Sbjct: 621 IYGFRKVDNIDGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAML 672


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/525 (25%), Positives = 242/525 (46%), Gaps = 22/525 (4%)

Query: 55  QPQTHCSFCMNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTL 113
           Q    C   M +  C   V +   L+++  + G+  EA  +  ++   G +P+L++Y  +
Sbjct: 27  QKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVI 86

Query: 114 LAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL 173
           +  L  +        I+ ++   G  PD + +N ++N + + GN  +A+    +M  +G+
Sbjct: 87  INGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGV 146

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
           +P+  TY  LI     A     +++  D M   G ++PN RTY  L+  +  +  + EA+
Sbjct: 147 SPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG-LRPNERTYTTLIDGFSRQGLLNEAY 205

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
            ++++M  SG  P VVTYN     +      ++A  V+ EM   G+ P+  +   IISG+
Sbjct: 206 RILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGF 265

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           C++G++  A +  + M E GV P+ V ++ LI+G  E+       ++   M +  + PD 
Sbjct: 266 CRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDE 325

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
            TY+T++NA+   G ++K   + D+M   G  PDA  YS+L  G  ++    +A+ LL  
Sbjct: 326 FTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFK 385

Query: 414 MIESGFHPNVVIFTTIIS---------------GWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           +I     P+ V + T+I                G+C  G M  A  VF+ M E    P  
Sbjct: 386 LIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGE 445

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
             +  ++ G+       +A  + + M   G  P   T + L +A    G+ +E   ++  
Sbjct: 446 AVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGD 505

Query: 519 IKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVS 563
                R NE E       + L  + HKE    +  N+ ++ N +S
Sbjct: 506 TLRSCRLNEAEL-----AKVLVEINHKEGNMEAVLNVSRLYNKLS 545



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 191/355 (53%), Gaps = 1/355 (0%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M  S ++P   TYN LI+G+   G+ ++ +     M R G + PN+ TYN L+ A+C   
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCL-PNVVTYNTLIDAYCKMG 59

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
            I EA+ ++  M++ GM+P++++YN I     + G   +A E++ EM + G  P+  T  
Sbjct: 60  RIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYN 119

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
            +++GYCKEG   +AL     M   GV P++V +  LI    +  + +   E    M+  
Sbjct: 120 TLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIR 179

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            + P+  TY+T+++ +S  G +++   I ++M ++G  P    Y+    G+   +  E+A
Sbjct: 180 GLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEA 239

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             ++  M+E G  P+VV ++TIISG+C  G +DRA ++  +M E GVSP+  T+ +L+ G
Sbjct: 240 LGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQG 299

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             E R+   A ++ Q M   G+ P + T+  L  A    G   +A  +  ++ +K
Sbjct: 300 LCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHK 354



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/382 (29%), Positives = 196/382 (51%), Gaps = 42/382 (10%)

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +N +I  F   G +++ +  F +M+ +G  P   TYNTLI  Y   G+ +E+ 
Sbjct: 6   VSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAF 65

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  MS +G ++PNL +YNV++   C E ++ EAW ++ +M   G  PD VTYNT+   
Sbjct: 66  GLLKSMSSKG-MQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNG 124

Query: 258 YAQNGEADQAEEVIVEMEHNGV-----------------------------------QPN 282
           Y + G   QA  +  EM  NGV                                   +PN
Sbjct: 125 YCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPN 184

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
            RT   +I G+ ++G + EA R    M E G  P++V +N  I G   +++R  ++E L 
Sbjct: 185 ERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHC-VLER--MEEALG 241

Query: 343 LMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +++E     + PDV++YSTI++ +   G +D+  ++  +M + G+ PDA  YS L +G  
Sbjct: 242 VVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLC 301

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
             +   +A +L   M++ G  P+   +TT+I+ +C +G +++A+ + D+M   G  P+  
Sbjct: 302 EMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAV 361

Query: 460 TFETLMWGYSEARQPWRAEEIL 481
           T+  L+ G ++  +   A+ +L
Sbjct: 362 TYSVLINGLNKQARTREAKRLL 383


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 218/427 (51%), Gaps = 6/427 (1%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A A+F  +++    PS++ ++ LL+A+    +F+ + S+  Q++  GM  +   ++
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYS 120

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN F     +  A+    KM + G  P   T ++L+ GY  + +  E+V L+D M   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +PN  T+N L+         +EA  ++ +M A G +PD+VTY  +     + G+ D 
Sbjct: 181 G-YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  ++ +ME   ++P       II G CK   + +AL   + M+  G+ PN+V ++ LI 
Sbjct: 240 AFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
                        +L+ M E ++NPDV T+S +++A+   G + + ++++D+M K  I P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
               YS L  G+      ++A+++   M+     P+VV ++T+I G+C    +D  +E+F
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELF 419

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            +M + G+  N  T+ TL+ G  +A     A+EI + M + GV P   T+  L +     
Sbjct: 420 REMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD----- 474

Query: 507 GLTKEAK 513
           GL K  K
Sbjct: 475 GLCKNGK 481



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 220/444 (49%), Gaps = 3/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N    R +   A A+   +++ G++P++VT ++LL      KR +   +++ Q+   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+++ FN +I+         EA+    +M   G  P   TY  ++ G    G  + + 
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ M  +G ++P +  Y  ++   C  K++ +A N+  +M   G++P+VVTY+++ + 
Sbjct: 242 ILLNKM-EQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G    A  ++ +M    + P+  T   +I  + KEGK+ EA +    M +  + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +V ++ LI GF  + DR D   ++   M      PDV++YST++  +  A  +D+  E+F
Sbjct: 361 IVTYSSLINGFC-MHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELF 419

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M + G+  +   Y+ L +G  +  + + A+E+   M+  G  PN++ + T++ G C +
Sbjct: 420 REMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +++A+ VF+ +    + P + T+  ++ G  +A +     ++   +   GV P    +
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539

Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
             +       G  +EA  +  ++K
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMK 563



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 217/450 (48%), Gaps = 1/450 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +++ L+N      +  EA A+ + +   G++P+ VT+ TL+  L +  + +   +++ 
Sbjct: 151 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALID 210

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  PD + +  V+N   + G+ + A     KM++  L P    Y T+I G     
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNK 270

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++++ L   M  +G ++PN+ TY+ L+   CN    ++A  ++  M    + PDV T+
Sbjct: 271 HMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  A+ + G+  +AE++  EM    + P+  T   +I+G+C   ++ EA +    M  
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
               P++V ++ LIKGF +    D   E+   M +  +  + +TY+T++     AG  D 
Sbjct: 390 KHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDM 449

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +EIF +M   G+ P+   Y+ L  G  +  + EKA  +   +  S   P +  +  +I 
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G ++   ++F  +   GV P++  + T++ G+        A+ + + MK  G  P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKN 521
               +  L  AR   G  + +  ++ ++++
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRS 599



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 183/383 (47%), Gaps = 1/383 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N L +RG    A  + N + +G  +P ++ YTT++  L   K  +   ++  ++E  G
Sbjct: 227 VVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKG 286

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ + ++++I+     G   +A      M E  + P   T++ LI  +   GK  E+ 
Sbjct: 287 IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 346

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL D M +  ++ P++ TY+ L+  +C    + EA  +   M +    PDVV+Y+T+   
Sbjct: 347 KLYDEMVKR-SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKG 405

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + +    D+  E+  EM   G+  N  T   +I G  + G    A    + M   GV PN
Sbjct: 406 FCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPN 465

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ +N L+ G  +    +    V   ++  ++ P + TY+ ++     AG ++   ++F 
Sbjct: 466 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 525

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           ++   G+KPD  AY+ +  G+ R+   E+A+ L   M E G  PN   + T+I     DG
Sbjct: 526 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 585

Query: 438 SMDRAIEVFDKMCEHGVSPNLKT 460
             + + E+  +M   G + +  T
Sbjct: 586 DREASAELIKEMRSCGFAGDAST 608



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 80/300 (26%), Positives = 150/300 (50%), Gaps = 2/300 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+++ ++ GK  EA+ +++ +++    PS+VTY++L+    +  R +    +  
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +      PD + ++ +I  F ++  ++E M+ F +M + GL   T TY TLI+G   AG
Sbjct: 386 FMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAG 445

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + + ++   M  +G V PN+ TYN L+   C    + +A  V   +  S M+P + TY
Sbjct: 446 DCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     + G+ +   ++   +   GV+P+      +ISG+C++G  +EA    + MKE
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PN   +N LI+  +   DR+   E++  M+      D  T   + N     G +DK
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD-GRLDK 623



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 171/354 (48%), Gaps = 36/354 (10%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +++ L +     +A  +F  +   G +P++VTY++L++ L    R++    ++S + E
Sbjct: 260 TTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 319

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             ++PD   F+A+I+AF + G + EA   + +M +  + P+  TY++LI G+ +  + +E
Sbjct: 320 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 379

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE------------------------ 231
           + ++ + M  + +  P++ +Y+ L++ +C  K + E                        
Sbjct: 380 AKQMFEFMVSK-HCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438

Query: 232 -----------AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
                      A  +  +M + G+ P+++TYNT+     +NG+ ++A  V   ++ + ++
Sbjct: 439 QGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 498

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P   T  I+I G CK GK+++       +   GV P++V +N +I GF     ++  D +
Sbjct: 499 PTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADAL 558

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
              MKE    P+   Y+T++ A    G  +   E+  +M   G   DA    ++
Sbjct: 559 FKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 56/243 (23%), Positives = 125/243 (51%), Gaps = 1/243 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ + + L+N      +  EA+ +F  ++     P +V+Y+TL+      KR +    + 
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELF 419

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G+  +++ +  +I    ++G+ + A + F +M   G+ P   TYNTL+ G    
Sbjct: 420 REMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK E+++ + + + R   ++P + TYN+++   C    + + W++   ++  G+KPDVV 
Sbjct: 480 GKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+ + + + G  ++A+ +  EM+ +G  PN      +I    ++G  + +    + M+
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598

Query: 311 EYG 313
             G
Sbjct: 599 SCG 601



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 116/228 (50%), Gaps = 1/228 (0%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F ++K     V S + L+    +  +  E   +F  + + G   + VTYTTL+  L    
Sbjct: 386 FMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAG 445

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
             +    I  ++  +G+ P+ + +N +++   ++G +E+AM  F  ++ S + PT  TYN
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            +I+G   AGK E+   L   +S +G VKP++  YN ++  +C + +  EA  +  +M  
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
            G  P+   YNT+  A  ++G+ + + E+I EM   G   +  T G++
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 224/446 (50%), Gaps = 4/446 (0%)

Query: 58  THCSFCMNKESCRTVR-SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAA 116
           +HCSF +   S   VR    K+  + +   K  +A  +F ++++    PS+V ++ LL+A
Sbjct: 33  SHCSFWVRDFS--GVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLSA 90

Query: 117 LTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPT 176
           +    +F+ + S+  Q++  G+  +   ++ +IN F     +  A+    KM + G  P 
Sbjct: 91  IAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPD 150

Query: 177 TSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
             T N+L+ G+    +  ++V L+  M   G  +P+  T+N L+         +EA  ++
Sbjct: 151 IVTLNSLLNGFCHGNRISDAVSLVGQMVEMG-YQPDSFTFNTLIHGLFRHNRASEAVALV 209

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
            +M   G +PD+VTY  +     + G+ D A  ++ +ME   ++P       II   C  
Sbjct: 210 DRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNY 269

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
             + +AL     M   G+ PN+V +N LI+             +L+ M E ++NP+V+T+
Sbjct: 270 KNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           S +++A+   G + + ++++D+M K  I PD   YS L  G+      ++A+ +   MI 
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
               PNVV + T+I G+C    +D  +E+F +M + G+  N  T+ TL+ G+ +AR+   
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEA 502
           A+ + + M + GV P   T+ +L + 
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDG 475



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 221/444 (49%), Gaps = 3/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N    R +   A A+   +++ G++P +VT  +LL       R +   S++ Q+ E G
Sbjct: 122 LINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMG 181

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PDS  FN +I+         EA+    +M   G  P   TY  ++ G    G  + ++
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M  +G ++P +  YN ++ A CN KN+ +A N+  +M   G++P+VVTYN++   
Sbjct: 242 SLLKKME-QGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRC 300

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G    A  ++ +M    + PN  T   +I  + KEGK+ EA +    M +  + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 360

Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +  ++ LI GF  + DR D    +  LM      P+V+TY+T++  +  A  +D+  E+F
Sbjct: 361 IFTYSSLINGFC-MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELF 419

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M + G+  +   Y+ L  G+ + +E + A+ +   M+  G  P+++ ++ ++ G C++
Sbjct: 420 REMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNN 479

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G ++ A+ VF+ +    + P++ T+  ++ G  +A +     ++   +   GV P   T+
Sbjct: 480 GKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTY 539

Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
             +       GL +EA  +  ++K
Sbjct: 540 TTMMSGFCRKGLKEEADALFREMK 563



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 225/445 (50%), Gaps = 3/445 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L++ L    +  EA A+ + ++  G +P LVTY  ++  L  +   +   S++ ++
Sbjct: 188 TFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKM 247

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+  ++P  + +N +I+A     N+ +A++ F +M   G+ P   TYN+LI+     G+ 
Sbjct: 248 EQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRW 307

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            ++ +LL D++ R+  + PN+ T++ L+ A+  E  + EA  +  +M    + PD+ TY+
Sbjct: 308 SDASRLLSDMIERK--INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 365

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++   +  +   D+A+ +   M      PN  T   +I G+CK  ++ E +   R M + 
Sbjct: 366 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQR 425

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+  N V +  LI GF +  + D    V   M    V PD++TYS +++     G ++  
Sbjct: 426 GLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETA 485

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             +F+ + ++ ++PD + Y+I+ +G  +  + E   +L  ++   G  PNVV +TT++SG
Sbjct: 486 LVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 545

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C  G  + A  +F +M E G  P+  T+ TL+  +        + E+++ M++      
Sbjct: 546 FCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGD 605

Query: 493 KSTFLLLAEARRATGLTKEAKRILS 517
            ST  L+        L K   ++LS
Sbjct: 606 ASTIGLVTNMLHDGRLDKSFLKMLS 630



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/436 (25%), Positives = 208/436 (47%), Gaps = 1/436 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + ++  L+N      +  +A ++   ++E G++P   T+ TL+  L    R +   +++ 
Sbjct: 151 IVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVD 210

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  PD + +  V+N   + G+++ A+    KM++  + P    YNT+I       
Sbjct: 211 RMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALCNYK 270

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              +++ L   M  +G ++PN+ TYN L+R  CN    ++A  ++  M    + P+VVT+
Sbjct: 271 NVNDALNLFTEMDNKG-IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTF 329

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  A+ + G+  +AE++  EM    + P+  T   +I+G+C   ++ EA      M  
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 389

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
               PN+V +N LIKGF +    D   E+   M +  +  + +TY+T+++ +  A   D 
Sbjct: 390 KDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDN 449

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            + +F  M   G+ PD   YSIL  G     + E A  +   +  S   P++  +  +I 
Sbjct: 450 AQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIE 509

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G ++   ++F  +   GV PN+ T+ T+M G+        A+ + + MK  G  P
Sbjct: 510 GMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLP 569

Query: 492 QKSTFLLLAEARRATG 507
              T+  L  A    G
Sbjct: 570 DSGTYNTLIRAHLRDG 585



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/316 (22%), Positives = 132/316 (41%), Gaps = 6/316 (1%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P++  ++ L+ A           ++  +M   G+  ++ TY+ +   + +  +   A  V
Sbjct: 79  PSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAV 138

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + +M   G +P+  T   +++G+C   +I +A+     M E G  P+   FN LI G   
Sbjct: 139 LAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFR 198

Query: 331 IMDRDGVDEVLALMKEFRV---NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
               +   E +AL+    V    PD++TY  ++N     G +D    +   M +  I+P 
Sbjct: 199 ---HNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPG 255

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ +       +    A  L   M   G  PNVV + ++I   C+ G    A  +  
Sbjct: 256 VVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLS 315

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            M E  ++PN+ TF  L+  + +  +   AE++   M    + P   T+  L        
Sbjct: 316 DMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 375

Query: 508 LTKEAKRILSKIKNKE 523
              EAK +   + +K+
Sbjct: 376 RLDEAKHMFELMISKD 391



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 112/226 (49%), Gaps = 1/226 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ++K+    V +   L+    +  +  E   +F  + + G   + VTYTTL+      +  
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           ++   +  Q+  +G+ PD + ++ +++    +G +E A+  F  ++ S + P   TYN +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I+G   AGK E+   L   +S +G VKPN+ TY  ++  +C +    EA  +  +M   G
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKG-VKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEG 566

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
             PD  TYNT+  A+ ++G+   + E+I EM       +  T G++
Sbjct: 567 PLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 612



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 81/177 (45%)

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M + R  P ++ +S +++A +     D    + + M   GI  + + YSIL   + R  +
Sbjct: 72  MVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQ 131

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
              A  +L  M++ G+ P++V   ++++G+C    +  A+ +  +M E G  P+  TF T
Sbjct: 132 LSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNT 191

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           L+ G     +   A  ++  M   G  P   T+ ++       G    A  +L K++
Sbjct: 192 LIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKME 248



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/225 (20%), Positives = 96/225 (42%)

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
           K+ +A+     M +    P++V F+ L+    ++   D V  +   M+   ++ ++ TYS
Sbjct: 61  KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            ++N +     +     +   M K G +PD    + L  G+        A  L+  M+E 
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G+ P+   F T+I G         A+ + D+M   G  P+L T+  ++ G  +      A
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             +L+ M+   + P    +  + +A        +A  + +++ NK
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNK 285


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 219/412 (53%), Gaps = 2/412 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++L + G+  EAQ +   + + G KP +VTY  L+     ++  +    + +++ + G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++PD + +N +I+ + ++  ++EAM  F ++    L PT ++YN+LI G   +G+     
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLLD M       P++ TYN+L+ A C E  I EA  V+  M   G+KP++VTYN +   
Sbjct: 391 KLLDEMHGSAQ-PPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDG 449

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y      + A+++   M  +G++P+     ++I+GYCK   + EA+   + M+   + P+
Sbjct: 450 YCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPD 509

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  +N LI G   +     V E+L  M +   +PDVITY+ +++A+      DK   +F 
Sbjct: 510 IASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFR 569

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            + + GI PD +    +     + ++ + AE+ L  ++  G  PNV  +T +I+  C DG
Sbjct: 570 QIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDG 628

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           S   A+ +  KM ++   P+  TFE ++    +  +  +AE++ + M A G+
Sbjct: 629 SFGEAMLLLSKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 220/449 (48%), Gaps = 2/449 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L++ L + G   +A  + + + E G     VTY +L+       R+  +  +++++  
Sbjct: 199 SALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVR 258

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             +DPD   FN +I+A  + G + EA      M + G  P   TYN L++GY       E
Sbjct: 259 ENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHE 318

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +L + M + G ++P++  YNVL+  +C  K + EA  +  ++    + P + +YN++ 
Sbjct: 319 ARELFNRMVKRG-LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLI 377

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
                +G     ++++ EM  +   P+  T  I+I   CKEG+I EAL     M + GV 
Sbjct: 378 DGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVK 437

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN+V +N ++ G+    + +   ++   M +  + PD++ Y+ ++N +     +D+   +
Sbjct: 438 PNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVL 497

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F +M    + PD  +Y+ L  G          +ELL  M +SG  P+V+ +  ++  +C 
Sbjct: 498 FKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCK 557

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
               D+AI +F ++ E G+ P+  T   ++    +  +   AE+ L+ +   G  P   T
Sbjct: 558 TQPFDKAISLFRQIVE-GIWPDFYTNHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQT 616

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKER 524
           + +L  A    G   EA  +LSK+++ +R
Sbjct: 617 YTILINALCKDGSFGEAMLLLSKMEDNDR 645



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 218/446 (48%), Gaps = 1/446 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   ++N     G   +A     NL+  G+     TY TL+  L+   +  +   ++ ++
Sbjct: 127 TFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEM 186

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E++ + P+ + ++A+I+   + G + +A+    ++ E G+     TYN+LI G    G+ 
Sbjct: 187 EKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRW 246

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E  +LL  M RE NV P+  T+N+L+ A C E  I EA  V+  M+  G KPD+VTYN 
Sbjct: 247 QEVTQLLTKMVRE-NVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNA 305

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y       +A E+   M   G++P+     ++I GYCK   + EA+   + +    
Sbjct: 306 LMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKN 365

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P +  +N LI G         V ++L  M      PDV+TY+ +++A    G + +  
Sbjct: 366 LVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKEGRILEAL 425

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +   M K G+KP+   Y+ +  GY        A+++   M++SG  P+++ +  +I+G+
Sbjct: 426 GVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNYNVLINGY 485

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C    +D AI +F +M    + P++ ++ +L+ G     +    +E+L  M   G  P  
Sbjct: 486 CKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCDSGQSPDV 545

Query: 494 STFLLLAEARRATGLTKEAKRILSKI 519
            T+ +L +A   T    +A  +  +I
Sbjct: 546 ITYNILLDAFCKTQPFDKAISLFRQI 571



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 119/489 (24%), Positives = 229/489 (46%), Gaps = 3/489 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL+ +++  G    A ++F  L   G  PS+ T+T L+     Q       S+++ + ++
Sbjct: 60  KLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILKS 119

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  P+ + FN +IN F  +G + +A+D    +   G      TY TLI G    G+ + +
Sbjct: 120 GYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKAA 179

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + LL  M +  +V+PNL  Y+ L+   C +  +++A  +  ++   G+  D VTYN++  
Sbjct: 180 LHLLQEMEKS-SVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLID 238

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
                G   +  +++ +M    V P+  T  I+I   CKEG+I EA      M + G  P
Sbjct: 239 GCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKP 298

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++V +N L++G+    +     E+   M +  + PDV+ Y+ +++ +     +D+   +F
Sbjct: 299 DIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            ++    + P   +Y+ L  G          ++LL  M  S   P+VV +  +I   C +
Sbjct: 359 KELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKE 418

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +  A+ V   M + GV PN+ T+  +M GY        A++I   M   G+ P    +
Sbjct: 419 GRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNY 478

Query: 497 LLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI--PVESLERLYHKEATTASYPN 554
            +L      T +  EA  +  ++++K    ++ +   +   + +L R+ H +       +
Sbjct: 479 NVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCD 538

Query: 555 LLQIPNVVS 563
             Q P+V++
Sbjct: 539 SGQSPDVIT 547



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 185/383 (48%), Gaps = 1/383 (0%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P +  F+ ++ A    G+   A+  F +++  G++P+ +T+  LI  Y        +  L
Sbjct: 53  PPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSL 112

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           L  + + G  +PNL T+N ++  +C    I +A +    + A G   D  TY T+    +
Sbjct: 113 LATILKSG-YQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLS 171

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +NG+   A  ++ EME + VQPN      +I G CK+G + +AL     + E G+  + V
Sbjct: 172 KNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAV 231

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            +N LI G   +     V ++L  M    V+PD  T++ +++A    G + + + +   M
Sbjct: 232 TYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMM 291

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            K G KPD   Y+ L +GY   +   +A EL   M++ G  P+V+ +  +I G+C    +
Sbjct: 292 SKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMV 351

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D A+ +F ++C   + P + ++ +L+ G   + +    +++L  M      P   T+ +L
Sbjct: 352 DEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNIL 411

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
            +A    G   EA  +L  +  K
Sbjct: 412 IDALCKEGRILEALGVLVMMMKK 434



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/343 (26%), Positives = 158/343 (46%), Gaps = 11/343 (3%)

Query: 46  YSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKP 105
           Y  +K  D         C NK    T+ S   L++ L   G+    + + + +      P
Sbjct: 345 YCKTKMVDEAMVLFKELC-NKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPP 403

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
            +VTY  L+ AL  + R      ++  + + G+ P+ + +NA+++ +    N+  A D F
Sbjct: 404 DVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIF 463

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
            +M +SGL P    YN LI GY      +E++ L   M R  N+ P++ +YN L+   CN
Sbjct: 464 NRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM-RHKNLIPDIASYNSLIDGLCN 522

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
              I     ++ +M  SG  PDV+TYN +  A+ +    D+A  +  ++   G+ P+  T
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYT 581

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALM 344
              I+   CK  K+K A    + +  +G  PN+  + +LI        +DG   E + L+
Sbjct: 582 NHAIVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALC----KDGSFGEAMLLL 637

Query: 345 KEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
            +   N   PD IT+  I+         DK +++ ++M   G+
Sbjct: 638 SKMEDNDRPPDAITFEIIIGVLLQRNETDKAEKLREEMIARGL 680



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/394 (21%), Positives = 157/394 (39%), Gaps = 40/394 (10%)

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C  +N+ +A    ++M      P    ++ +  A  + G    A  +  +++  G+ P+ 
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF--------------- 328
            T  I+I+ Y  +     A     T+ + G  PNLV FN +I GF               
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 329 ----------------VEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
                           +  + ++G +   L L++E     V P+++ YS +++     GF
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +     +   +G+ GI  DA  Y+ L  G       ++  +LL  M+     P+   F  
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I   C +G +  A  V   M + G  P++ T+  LM GY        A E+   M   G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESL---ERLYHK 545
           + P    + +L +    T +  EA  +  ++ NK     + +   + ++ L    R+ H 
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSL-IDGLCNSGRISHV 389

Query: 546 EATTASYPNLLQIPNVVSSDQKGSAAALKKGRML 579
           +          Q P+VV+ +    A   K+GR+L
Sbjct: 390 KKLLDEMHGSAQPPDVVTYNILIDALC-KEGRIL 422


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 197/378 (52%), Gaps = 6/378 (1%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           P+++ +N VI  F   G ++ A+D   +M+E  G+ P   TY T+I G+   G+ +E+VK
Sbjct: 512 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 571

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           + D M  +G VKP    YN L+  +C++  +  A     +M   G+   V TYN +  A 
Sbjct: 572 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 631

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
             +G   +A E++ EM   G+ P+  T  I+I+G+CKEG +K+AL     M   GV   +
Sbjct: 632 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 691

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           V +  LI    +       D++        + PD++ Y+ ++N+ ST+G +D+  EI  +
Sbjct: 692 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 751

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M K  I PD   Y+ L +G       ++A +L+  M E G  P++V + T+ISG+   G 
Sbjct: 752 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 811

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +  A+ + ++M   G +P L T+  L+ G  +  Q   AE +++ M   G+ P  ST++ 
Sbjct: 812 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 871

Query: 499 LAEARRATGLTKEAKRIL 516
           L E     GLT E +R +
Sbjct: 872 LIE-----GLTTEDERAI 884



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 202/394 (51%), Gaps = 7/394 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE-N 136
           ++  L   GKP  A  +   +     +P+ VTY T++A    + R  +   IM ++ E  
Sbjct: 489 MLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 544

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIAGKPEE 195
           G+ P+   +  VI+ + + G ++EA+  F +M   G + P    YN LI GY   GK + 
Sbjct: 545 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 604

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++   D M   G V   + TYN+LV A   +   TEA+ ++ +M   G+ PDV TYN + 
Sbjct: 605 ALLYRDRMVERG-VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 663

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + + G   +A E+   M   GV+    T   +I    K+G+++E  +        G+ 
Sbjct: 664 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR 723

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+LV++N LI       + D   E++  M++ R+ PD +TY+T+M      G +D+ +++
Sbjct: 724 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 783

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            D+M + GI+PD   Y+ L  GY  + + + A  +   M+  GF+P ++ +  +I G C 
Sbjct: 784 IDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 843

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +G  D A  +  +M E+G++P+  T+ +L+ G +
Sbjct: 844 NGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 877



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 183/366 (50%), Gaps = 11/366 (3%)

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A   F  M    L   T+T+N +++    AGKP  +++LL  M R     PN  TYN ++
Sbjct: 467 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNTVI 521

Query: 221 RAWCNEKNITEAWNVMHKMAA-SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG- 278
             +C+   +  A ++M +M    G+ P+  TY T+ + + + G  D+A +V  EM   G 
Sbjct: 522 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 581

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           V+P       +I GYC +GK+  AL +   M E GV   +  +NLL+      MD  G +
Sbjct: 582 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL--FMDGRGTE 639

Query: 339 --EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             E++  M    + PDV TY+ ++N     G + K  EIF++M + G++     Y+ L  
Sbjct: 640 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 699

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
              ++ + ++ ++L    +  G  P++V++  +I+   + G++DRA E+  +M +  ++P
Sbjct: 700 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 759

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +  T+ TLM G     +   A +++  M   G+ P   T+  L       G  K+A RI 
Sbjct: 760 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 819

Query: 517 SKIKNK 522
           +++ NK
Sbjct: 820 NEMMNK 825



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 148/288 (51%), Gaps = 1/288 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+    ++GK   A    + ++E G   ++ TY  L+ AL +  R    + ++ ++   G
Sbjct: 592 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 651

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N +IN   + GN+++A++ F  M   G+  T  TY  LI      G+ +E+ 
Sbjct: 652 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 711

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL D   R G ++P+L  YN L+ +     NI  A+ +M +M    + PD VTYNT+   
Sbjct: 712 KLFDEAVRRG-IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 770

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G  D+A ++I EM   G+QP+  T   +ISGY  +G +K+ALR    M   G +P 
Sbjct: 771 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 830

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
           L+ +N LI+G  +    D  + ++  M E  + PD  TY +++   +T
Sbjct: 831 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 878



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 173/376 (46%), Gaps = 5/376 (1%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           FN ++     +G    A++   +M      P   TYNT+I G+   G+ + ++ ++  M 
Sbjct: 486 FNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMR 541

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-MKPDVVTYNTIATAYAQNGE 263
             G + PN  TY  ++  WC    + EA  V  +M   G +KP+ V YN +   Y   G+
Sbjct: 542 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 601

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D A      M   GV     T  +++     +G+  EA      M   G+ P++  +N+
Sbjct: 602 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 661

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           LI G  +  +     E+   M    V   V+TY+ ++ A S  G + +  ++FD+  + G
Sbjct: 662 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG 721

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           I+PD   Y+ L   +      ++A E++  M +    P+ V + T++ G C  G +D A 
Sbjct: 722 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEAR 781

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           ++ D+M E G+ P+L T+ TL+ GYS       A  I   M   G +P   T+  L +  
Sbjct: 782 KLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 841

Query: 504 RATGLTKEAKRILSKI 519
              G   +A+ ++ ++
Sbjct: 842 CKNGQGDDAENMVKEM 857



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 156/327 (47%), Gaps = 2/327 (0%)

Query: 86  GKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
           G+  EA  +F+ ++  G  KP  V Y  L+     Q + ++      ++ E G+      
Sbjct: 564 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 623

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +N +++A    G   EA +   +M   GL P   TYN LI G+   G  ++++++ + MS
Sbjct: 624 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 683

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G V+  + TY  L+ A   +  + E   +  +    G++PD+V YN +  +++ +G  
Sbjct: 684 RRG-VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 742

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           D+A E++ EME   + P+  T   ++ G C  G++ EA +    M E G+ P+LV +N L
Sbjct: 743 DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTL 802

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G+    D      +   M     NP ++TY+ ++      G  D  + +  +M + GI
Sbjct: 803 ISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 862

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELL 411
            PD   Y  L +G   E E    +E L
Sbjct: 863 TPDDSTYISLIEGLTTEDERAIDDERL 889



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 101/189 (53%), Gaps = 2/189 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M++   R TV + T L+ +L ++G+ QE   +F+  +  G +P LV Y  L+ + +    
Sbjct: 682 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 741

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    IM ++E+  + PD + +N ++      G ++EA     +M E G+ P   TYNT
Sbjct: 742 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 801

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY + G  ++++++ + M  +G   P L TYN L++  C      +A N++ +M  +
Sbjct: 802 LISGYSMKGDVKDALRIRNEMMNKG-FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 860

Query: 243 GMKPDVVTY 251
           G+ PD  TY
Sbjct: 861 GITPDDSTY 869


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 208/412 (50%), Gaps = 7/412 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   ++N L + GK ++A+    ++   G KP++VTY T++     + R      ++
Sbjct: 235 TVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVL 294

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++  G++PDS  + ++I+   + G +EEA     KMKE GL PT  TYNTLI GY   
Sbjct: 295 DIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNK 354

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   ++    D M R   + P + TYN+L+ A   E  + EA  ++  M  SG+ PD +T
Sbjct: 355 GDLVKAFGYRDEMVRRA-ILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSIT 413

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +   Y + G A +A  +  EM   G+QP   T   +I    K  ++K A      + 
Sbjct: 414 YNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKII 473

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAG 367
             G  P+L++FN LI G         +D   AL+KE     + PD +TY+T+M      G
Sbjct: 474 REGASPDLIMFNALIDGHCA---NGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREG 530

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +++ +E+  +M + GI+PD  +Y+ L  GY +  +   A  +   M+  GF+P ++ + 
Sbjct: 531 KVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYN 590

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            +I G C +   D A E+  +M   G++P+  T+ +L+ G  +      A +
Sbjct: 591 ALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEASD 642



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/399 (29%), Positives = 202/399 (50%), Gaps = 1/399 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           K ++ T+  ++  L  + +       +  +E  G+ P+ + +N VI+ +   G +E A  
Sbjct: 233 KSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARM 292

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
               MK  G+ P + TY +LI G    GK EE+  +L+ M +E  + P   TYN L+  +
Sbjct: 293 VLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKM-KEIGLLPTAVTYNTLIDGY 351

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           CN+ ++ +A+    +M    + P V TYN +  A    G+ D+A+ +I +M  +G+ P+ 
Sbjct: 352 CNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDS 411

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T  I+I+GYC+ G  K+A      M   G+ P LV +  LI    +       D++   
Sbjct: 412 ITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEK 471

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           +     +PD+I ++ +++     G +D+   +  +M K  I PD   Y+ L +G  RE +
Sbjct: 472 IIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGK 531

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            E+A ELL  M   G  P+ + + T+ISG+   G ++ A  + D+M   G +P L T+  
Sbjct: 532 VEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNA 591

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           L+ G  + +Q   AEE+L+ M + G+ P  ST+  L E 
Sbjct: 592 LIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEG 630



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 191/381 (50%), Gaps = 1/381 (0%)

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           SI F+ +I A  E    ++A + F  MKE G+ P   T+N ++  +    + E    L  
Sbjct: 166 SIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYA 225

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M R   +K  + T+N+++   C E  + +A + +  M   G+KP+VVTYNT+   Y   
Sbjct: 226 EMFRL-KIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSR 284

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           G  + A  V+  M++ GV+P+  T G +ISG CK GK++EA      MKE G+ P  V +
Sbjct: 285 GRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTY 344

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N LI G+    D          M    + P V TY+ +++A    G MD+   +  DMG 
Sbjct: 345 NTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGD 404

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
           +GI PD+  Y+IL  GY R    +KA  L   MI  G  P +V +T++I        M  
Sbjct: 405 SGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKA 464

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A ++F+K+   G SP+L  F  L+ G+       RA  +L+ M    + P + T+  L +
Sbjct: 465 ADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQ 524

Query: 502 ARRATGLTKEAKRILSKIKNK 522
            R   G  +EA+ +L ++K +
Sbjct: 525 GRCREGKVEEARELLKEMKRR 545



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 191/395 (48%), Gaps = 2/395 (0%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G K S+V +  L+ A    KR +        ++E G+ P    FNA+++ F +    E  
Sbjct: 162 GTKSSIV-FDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETV 220

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
              + +M    +  T  T+N +I      GK +++   +  M   G VKPN+ TYN ++ 
Sbjct: 221 WVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLG-VKPNVVTYNTVIH 279

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
            +C+   +  A  V+  M   G++PD  TY ++ +   + G+ ++A  ++ +M+  G+ P
Sbjct: 280 GYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLP 339

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
              T   +I GYC +G + +A  +   M    + P +  +NLLI         D  D ++
Sbjct: 340 TAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMI 399

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M +  + PD ITY+ ++N +   G   K   + D+M   GI+P    Y+ L     + 
Sbjct: 400 KDMGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKR 459

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
              + A++L   +I  G  P++++F  +I G C++G++DRA  +  +M +  + P+  T+
Sbjct: 460 NRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTY 519

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            TLM G     +   A E+L+ MK  G+ P   ++
Sbjct: 520 NTLMQGRCREGKVEEARELLKEMKRRGIRPDHISY 554



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 80/188 (42%), Gaps = 3/188 (1%)

Query: 336 GVDEV---LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           GV +V   LA+ ++       I +  ++ A       D   E FD M + G+ P    ++
Sbjct: 146 GVKDVFHELAITRDRLGTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFN 205

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            +   +++  + E    L   M        V  F  +I+  C +G + +A +    M   
Sbjct: 206 AMLSLFLKLNQTETVWVLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENL 265

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           GV PN+ T+ T++ GY    +   A  +L IMK  GV P   T+  L       G  +EA
Sbjct: 266 GVKPNVVTYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEA 325

Query: 513 KRILSKIK 520
             IL K+K
Sbjct: 326 SGILEKMK 333


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/420 (28%), Positives = 217/420 (51%), Gaps = 7/420 (1%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           +  LM  L  +G+ +++    + ++  G +   V+Y  LL  L           ++  +E
Sbjct: 83  LNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIE 142

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           +    PD + ++ +I+   +   ++EA D + +M   G+ P   TY TLI G+ +AG+  
Sbjct: 143 DRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLM 202

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           E+  LL+ M  + N+ PN+ TYN L+   C E  + E+ N++  M   G+KPDVV Y+ +
Sbjct: 203 EAFGLLNEMILK-NINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSIL 261

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              Y   GE  +A+++ + M   GV P+  +  III+G CK  ++ EA+   R M    +
Sbjct: 262 MDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNM 321

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF--RVNP-DVITYSTIMNAWSTAGFMDK 371
            P+ V ++ LI G  ++     +  +L L KE   R  P +++TY+++++       +DK
Sbjct: 322 IPDTVTYSSLIDGLCKL---GRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDK 378

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F  M + GI+P+ + Y+ L  G  +    +K + L   ++  G+  +V  +T +IS
Sbjct: 379 AIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMIS 438

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C +G  D A+ +  KM ++G  PN  TFE ++    E  +  +AE++L  M A G+ P
Sbjct: 439 GLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 203/417 (48%), Gaps = 1/417 (0%)

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
           H P ++ +  +L +L   K + ++ S+  Q+E  G+ PD +  + +IN F   G M  + 
Sbjct: 6   HIPPIIEFGKILGSLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSF 65

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
               K+ + G  P T   NTL+KG  + G+ ++S+   D +  +G  + +  +Y +L+  
Sbjct: 66  SVLGKILKLGYQPNTIILNTLMKGLCLKGEVKKSLHFHDKVVAQG-FQMDQVSYGILLNG 124

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C       A  ++  +     +PDVV Y+TI     ++   D+A ++  EM   G+ P+
Sbjct: 125 LCKIGETRCAIKLLRTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPD 184

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   +I G+C  G++ EA      M    ++PN+  +N LI    +         +LA
Sbjct: 185 VITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLA 244

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
           +M +  V PDV+ YS +M+ +   G + K K+IF  M + G+ PD ++Y+I+  G  + +
Sbjct: 245 VMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGK 304

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             ++A  LL  M+     P+ V ++++I G C  G +   +++  +M   G   NL T+ 
Sbjct: 305 RVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYN 364

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +L+ G  + +   +A  +   MK  G+ P K T+  L +     G  K+ + +   +
Sbjct: 365 SLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHL 421



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 162/350 (46%), Gaps = 36/350 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+      G+  EA  + N +I     P++ TY TL+  L  + +     ++++
Sbjct: 185 VITYTTLICGFCLAGQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLA 244

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G+ PD + ++ +++ +   G +++A   F  M ++G+ P   +YN +I G     
Sbjct: 245 VMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGK 304

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E++ LL  M  + N+ P+  TY+ L+   C    IT   ++  +M   G   ++VTY
Sbjct: 305 RVDEAMNLLREMLHK-NMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTY 363

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++     +N   D+A  + ++M+  G+QPN  T   +I G CK G++K+     +    
Sbjct: 364 NSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQ---- 419

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
                     +LL+KG+                       DV TY+ +++     G  D+
Sbjct: 420 ----------HLLVKGYC---------------------IDVWTYTVMISGLCKEGMFDE 448

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
              +   M   G  P+A  + I+ +  + + E +KAE+LL  MI  G  P
Sbjct: 449 ALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 139/285 (48%)

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           +M A G+ PD+VT + +   +   G+   +  V+ ++   G QPN      ++ G C +G
Sbjct: 35  QMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILNTLMKGLCLKG 94

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
           ++K++L F   +   G   + V + +L+ G  +I +     ++L  +++    PDV+ YS
Sbjct: 95  EVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLLRTIEDRSTRPDVVMYS 154

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           TI++       +D+  +++ +M   GI PD   Y+ L  G+    +  +A  LL  MI  
Sbjct: 155 TIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLMEAFGLLNEMILK 214

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
             +PN+  + T+I   C +G +  +  +   M + GV P++  +  LM GY    +  +A
Sbjct: 215 NINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKA 274

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           ++I  +M   GV+P   ++ ++           EA  +L ++ +K
Sbjct: 275 KQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHK 319


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 233/474 (49%), Gaps = 21/474 (4%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           TKL++ L       +A  + + L   GH P L+ Y  ++       R +S + ++ +++ 
Sbjct: 96  TKLIHGLFTSKTIDKAIQVMHILENHGH-PDLIAYNAIITGFCRANRIDSAYQVLDRMKN 154

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  PD + +N +I +    G ++ A++   ++ +    PT  TY  LI+   + G  +E
Sbjct: 155 KGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDE 214

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++KLLD M  E N++P++ TYN ++R  C E  +  A+ ++  +++ G  PDV+TYN + 
Sbjct: 215 AMKLLDEM-LEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILL 273

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
                 G+ +   E++ +M   G + N  T  ++IS  C++GK++E +   + MK+ G+ 
Sbjct: 274 RGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLK 333

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+   ++ LI    +    D   EVL +M      PD++ Y+TI+         D+   I
Sbjct: 334 PDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSI 393

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F+ +G+ G  P+A +Y+ +           +A  +++ M++ G  P+ + + ++IS  C 
Sbjct: 394 FEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCR 453

Query: 436 DGSMDRAIEVFDKM------CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           DG +D AIE+   M      C+    P++ ++  ++ G  +  +   A E+L  M   G 
Sbjct: 454 DGMVDEAIELLVDMEMESSECK----PSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGC 509

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLY 543
            P ++T+  L E     G   +A+ + + + N +  +E          S ERLY
Sbjct: 510 RPNETTYTFLIEGIGFGGCLNDARDLATTLVNMDAISE---------HSFERLY 554



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 195/413 (47%), Gaps = 9/413 (2%)

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           FN     +  +   G  PD +    +I+    S  +++A+     ++  G  P    YN 
Sbjct: 73  FNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDLIAYNA 131

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G+  A + + + ++LD M  +G   P++ TYN+L+ + C+   +  A    +++   
Sbjct: 132 IITGFCRANRIDSAYQVLDRMKNKG-FSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKE 190

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
             KP VVTY  +  A    G  D+A +++ EM    +QP+  T   II G C+EG +  A
Sbjct: 191 NCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRA 250

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
            +   ++   G  P+++ +N+L++G +     +   E+++ M       +V+TYS ++++
Sbjct: 251 FQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLISS 310

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G +++   +  DM K G+KPD + Y  L     +E   + A E+L  MI  G  P+
Sbjct: 311 VCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPD 370

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           +V + TI++  C     D A+ +F+K+ E G SPN  ++ ++           RA  ++ 
Sbjct: 371 IVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTGHKVRALGMIL 430

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP 535
            M   GV P   T+  L       G+  EA  +L  +       EME+ E  P
Sbjct: 431 EMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDM-------EMESSECKP 476



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 179/392 (45%), Gaps = 9/392 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ SL  RG    A    N L++   KP++VTYT L+ A  +Q   +    ++ ++ E  
Sbjct: 167 LIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEIN 226

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N++I      G ++ A      +   G  P   TYN L++G    GK E   
Sbjct: 227 LQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGY 286

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+  M   G  + N+ TY+VL+ + C +  + E   ++  M   G+KPD   Y+ +  A
Sbjct: 287 ELMSDMVARG-CEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAA 345

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G  D A EV+  M  +G  P+      I++  CK+ +  EAL     + E G  PN
Sbjct: 346 LCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPN 405

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +N +         +     ++  M +  V+PD ITY+++++     G +D+  E+  
Sbjct: 406 ASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLV 465

Query: 378 D--MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           D  M  +  KP   +Y+I+  G  +      A E+L  M++ G  PN   +T +I G   
Sbjct: 466 DMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGF 525

Query: 436 DGSMDRAIEV------FDKMCEHGVSPNLKTF 461
            G ++ A ++       D + EH      KTF
Sbjct: 526 GGCLNDARDLATTLVNMDAISEHSFERLYKTF 557


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 120/428 (28%), Positives = 213/428 (49%), Gaps = 6/428 (1%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           +T+L++ L   G+   A  + + L++ G      +   LL AL   + F  +++++++++
Sbjct: 273 LTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMK 332

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK--ESG---LTPTTSTYNTLIKGYGI 189
           E  + P+ + F  +IN   +   ++EA++ F KM   ES    + P   TYNTLI G   
Sbjct: 333 EMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCK 392

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+ EE + L++ M  +    PN  TYN L+  +C    I  A  +  +M   G+ P+VV
Sbjct: 393 VGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVV 452

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           T NT+     ++G  + A E   EM+  G++ N  T   +I  +C    I++A+     M
Sbjct: 453 TLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEM 512

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            E G  P+ +++  LI G  +    D    VL+ MKE   +PD+++++ ++N +     +
Sbjct: 513 LEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKL 572

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D+  E+  +M  AGIKPD   Y+ L   + +  +   A  L+  M++ G  P VV +  +
Sbjct: 573 DEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGAL 632

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHG-VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           I  +C +G++D A+++F  M     V PN   +  L+       Q   A  ++  MK  G
Sbjct: 633 IHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKG 692

Query: 489 VHPQKSTF 496
           V P  +TF
Sbjct: 693 VKPNTNTF 700



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 235/499 (47%), Gaps = 20/499 (4%)

Query: 61  SFCMNKESCRTVRSMTKLMNSLIE----RGKPQEAQAIFNNLIE--GGHKPSLVTYTTLL 114
           SF +  E C + R +T + N LI+    +G+  +A  + + +++      P+  T   + 
Sbjct: 178 SFLVYNELCPS-RRLTHIRNILIDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVF 236

Query: 115 AALTIQKRFN------SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           +AL+ + +         I  ++S+  E+ + P+SI+   +I+    SG  + A D    +
Sbjct: 237 SALSKRDKVGRAVDEEEIVGLVSKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGL 296

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
            + G     ++ N L+   G A + +    LL  M +E +++PN+ T+ +L+   C  + 
Sbjct: 297 MKLGGVMEAASCNALLTALGRAREFKRMNTLLAEM-KEMDIQPNVVTFGILINHLCKFRR 355

Query: 229 ITEAWNVMHKMAASG-----MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN-GVQPN 282
           + EA  V  KM         ++PDV+TYNT+     + G  ++   ++  M       PN
Sbjct: 356 VDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPN 415

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   +I GYCK   I+ A      M + GV PN+V  N L+ G  +    +G  E   
Sbjct: 416 TVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFN 475

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M+   +  + +TY+ ++ A+     ++K  E+FD+M +AG  PDA  Y  L  G  +  
Sbjct: 476 EMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAG 535

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           + ++A  +L  M E+GF P++V F  +I+G+C    +D A E+  +M   G+ P+  T+ 
Sbjct: 536 KLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYN 595

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           TL+  +S+      A  +++ M   G+ P   T+  L  A    G   EA +I   + + 
Sbjct: 596 TLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSST 655

Query: 523 ERTNEMEAEEDIPVESLER 541
            +        +I + SL R
Sbjct: 656 SKVPPNTVIYNILINSLCR 674



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 57/212 (26%), Positives = 107/212 (50%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + GK   A  + + + E G  P +V++  L+     + + +  + ++ ++E  G
Sbjct: 527 LISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAG 586

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +N +I+ FS++G+   A     KM + GL PT  TY  LI  Y + G  +E++
Sbjct: 587 IKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAM 646

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+   MS    V PN   YN+L+ + C +  +  A ++M  M   G+KP+  T+N +   
Sbjct: 647 KIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKG 706

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
             +     +A E++  M  +   P+  T  I+
Sbjct: 707 LQEKNWLSKAFELMDRMTEHACNPDYITMEIL 738


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 228/469 (48%), Gaps = 11/469 (2%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C    S   +++ L + GK +EA ++   +   G+ P +V+Y+ ++      ++   +  
Sbjct: 249 CWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLK 308

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +M +++  G+ P+   +N++I+   ++G + EA      MK   + P    Y TLI G+G
Sbjct: 309 LMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFG 368

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            +G      KL D M R+  + P+  TY  ++   C    + EA  +  +M + G+KPD 
Sbjct: 369 KSGNVSVEYKLFDEMKRK-KIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDE 427

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTY  +   Y + GE  +A  +  +M   G+ PN  T   ++ G CK G++  A      
Sbjct: 428 VTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHE 487

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWST 365
           M E G+ PN+  +N LI G  ++     +++ + LM+E  +    PD ITY+TIM+A+  
Sbjct: 488 MSEKGLQPNVCTYNALINGLCKV---GNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCK 544

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G M K  E+   M   G++P    +++L  G+      E  E L+  M++ G  PN   
Sbjct: 545 MGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATT 604

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           F +++  +C   +M   IE++  M   GV P+  T+  L+ G+ +AR    A  + + M 
Sbjct: 605 FNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMV 664

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI 534
             G     +++  L +        +EA+++  ++    RT+   AE++I
Sbjct: 665 EKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEM----RTHGFIAEKEI 709



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 211/425 (49%), Gaps = 3/425 (0%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           + A  +F    E G   + V+Y  +L  L    +    HS++ Q+E  G  PD + ++ +
Sbjct: 234 RTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVI 293

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           ++ + +   + + +    +++  GL P   TYN++I      G+  E+ ++L +M  +  
Sbjct: 294 VDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQ-R 352

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           + P+   Y  L+  +    N++  + +  +M    + PD VTY ++     Q G+  +A 
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           ++  EM   G++P+  T   +I GYCK G++KEA      M E G+ PN+V +  L+ G 
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +  + D  +E+L  M E  + P+V TY+ ++N     G +++  ++ ++M  AG  PD 
Sbjct: 473 CKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDT 532

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y+ +   Y +  E  KA ELL  M++ G  P +V F  +++G+C  G ++    +   
Sbjct: 533 ITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKW 592

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAE-EILQIMKAFGVHPQKSTFLLLAEARRATG 507
           M + G+ PN  TF +LM  Y   R   RA  EI + M A GV P  +T+ +L +      
Sbjct: 593 MLDKGIMPNATTFNSLMKQYC-IRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKAR 651

Query: 508 LTKEA 512
             KEA
Sbjct: 652 NMKEA 656



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 199/406 (49%), Gaps = 1/406 (0%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G KP+  TY ++++ L    R      ++  ++   + PD++ +  +I+ F +SGN+   
Sbjct: 317 GLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVE 376

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
              F +MK   + P   TY ++I G   AGK  E+ KL   M  +G +KP+  TY  L+ 
Sbjct: 377 YKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKG-LKPDEVTYTALID 435

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
            +C    + EA+++ ++M   G+ P+VVTY  +     + GE D A E++ EM   G+QP
Sbjct: 436 GYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQP 495

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N  T   +I+G CK G I++A++    M   G  P+ + +  ++  + ++ +     E+L
Sbjct: 496 NVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELL 555

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
            +M +  + P ++T++ +MN +  +G ++  + +   M   GI P+A  ++ L K Y   
Sbjct: 556 RIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIR 615

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
                  E+   M   G  P+   +  +I G C   +M  A  +  +M E G S    ++
Sbjct: 616 NNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASY 675

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            +L+ G+ + ++   A ++ + M+  G   +K  + +  +     G
Sbjct: 676 NSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYEEG 721



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 186/376 (49%), Gaps = 1/376 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++   + G       +F+ +      P  VTYT+++  L    +      + S++  
Sbjct: 361 TTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLS 420

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ PD + + A+I+ + ++G M+EA     +M E GLTP   TY  L+ G    G+ + 
Sbjct: 421 KGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDI 480

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +LL  MS +G ++PN+ TYN L+   C   NI +A  +M +M  +G  PD +TY TI 
Sbjct: 481 ANELLHEMSEKG-LQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIM 539

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            AY + GE  +A E++  M   G+QP   T  ++++G+C  G +++  R  + M + G+ 
Sbjct: 540 DAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIM 599

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN   FN L+K +    +     E+   M    V PD  TY+ ++     A  M +   +
Sbjct: 600 PNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFL 659

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
             +M + G    A +Y+ L KG+ + ++ E+A +L   M   GF     I+   +     
Sbjct: 660 HKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFVDVNYE 719

Query: 436 DGSMDRAIEVFDKMCE 451
           +G+ +  +E+ D+  E
Sbjct: 720 EGNWENTLELCDEAIE 735



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 196/385 (50%), Gaps = 4/385 (1%)

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +D  ++F   + N+F     +  A   F +  E G+   T +YN ++      GK +E+ 
Sbjct: 216 VDSCNLFLARLSNSFD---GIRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAH 272

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M   GNV P++ +Y+V+V  +C  + + +   +M ++   G+KP+  TYN+I + 
Sbjct: 273 SLLIQMEFRGNV-PDVVSYSVIVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISF 331

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G   +AE+V+  M++  + P+      +ISG+ K G +    +    MK   + P+
Sbjct: 332 LCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPD 391

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +  +I G  +        ++ + M    + PD +TY+ +++ +  AG M +   + +
Sbjct: 392 FVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHN 451

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + G+ P+   Y+ L  G  +  E + A ELL  M E G  PNV  +  +I+G C  G
Sbjct: 452 QMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVG 511

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
           ++++A+++ ++M   G  P+  T+ T+M  Y +  +  +A E+L+IM   G+ P   TF 
Sbjct: 512 NIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFN 571

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
           +L      +G+ ++ +R++  + +K
Sbjct: 572 VLMNGFCMSGMLEDGERLIKWMLDK 596



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 102/380 (26%), Positives = 188/380 (49%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           + F+       E+G + EA   F K+   G+  +  + N  +     +     +   +  
Sbjct: 182 LVFDVFFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFR 241

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
              E  V  N  +YN+++   C    + EA +++ +M   G  PDVV+Y+ I   Y Q  
Sbjct: 242 EYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVE 301

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
           +  +  +++ E++  G++PN  T   IIS  CK G++ EA +  R MK   + P+ V++ 
Sbjct: 302 QLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYT 361

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            LI GF +  +     ++   MK  ++ PD +TY+++++    AG + + +++F +M   
Sbjct: 362 TLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSK 421

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+KPD   Y+ L  GY +  E ++A  L   M+E G  PNVV +T ++ G C  G +D A
Sbjct: 422 GLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIA 481

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            E+  +M E G+ PN+ T+  L+ G  +     +A ++++ M   G  P   T+  + +A
Sbjct: 482 NELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDA 541

Query: 503 RRATGLTKEAKRILSKIKNK 522
               G   +A  +L  + +K
Sbjct: 542 YCKMGEMAKAHELLRIMLDK 561


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 243/477 (50%), Gaps = 11/477 (2%)

Query: 64  MNKESCRT---VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           M KE  R    V S   +++   ++G+  +A  +FN +++ G  P + TY +++ AL   
Sbjct: 221 MAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKA 280

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
           +  +    ++ Q+ + G++PD + +NA+I+ +S SG+ +E+   F KM   GL P T T+
Sbjct: 281 RAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTF 340

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           ++ +      G+ +++ ++   M+ +G++ P++ +Y++L+  +  E    +  N+ H MA
Sbjct: 341 SSFMSSLCKHGRSKDAEEIFQYMTTKGHM-PDIVSYSILLHGYATEGRFADMNNLFHSMA 399

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
             G+  +    N + +A+A+ G  D+A  V  EM+  GV+PN  T   +IS +C+ G++ 
Sbjct: 400 DKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLA 459

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA-LMKEFRVNPDVITYSTI 359
           +A+     M   G+ PN  +++ LI GF    D     E ++ +M +    P+++ +S+I
Sbjct: 460 DAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSI 519

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +++    G +   +++F+ +   G +P    ++ L  GY    + EKA  +L  M+  G 
Sbjct: 520 IHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGI 579

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            P+VV   T++SG+C  G +D  + +F +M    V P   T+  ++ G   A +   A++
Sbjct: 580 EPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKK 639

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPV 536
           +   M   G      T+ +L +      LT EA  +  K+        M+ + DI +
Sbjct: 640 MFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL------GAMDCKFDITI 690



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 223/464 (48%), Gaps = 40/464 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSI 129
           TVR+   LM+      +P    A    L+  G K   +  TT L  L   KR + ++  +
Sbjct: 123 TVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEAVDVL 182

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG--LTPTTSTYNTLIKGY 187
           + ++ E    PD+I +N VI +       +EA+D   +M + G   +P   ++NT+I G+
Sbjct: 183 LHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 242

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G+  ++  L + M ++G V P++ TYN +V A C  + + +A  V+ +M   G++PD
Sbjct: 243 FKQGEVSKACNLFNEMVQKG-VVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPD 301

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
            VTYN I   Y+ +G   ++ ++  +M   G+ P+  T    +S  CK G+ K+A    +
Sbjct: 302 GVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQ 361

Query: 308 TMKEYGVHPNLVIFNLLIKGF---------------------------VEIM-----DRD 335
            M   G  P++V +++L+ G+                           + I+      R 
Sbjct: 362 YMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRG 421

Query: 336 GVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
            +DE + +  E +   V P+V+TYST+++A+   G +    E F  M   GI+P+   Y 
Sbjct: 422 MMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYH 481

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFH-PNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
            L  G+    +  KA+E +  M+  G H PN+V F++II   C +G +  A +VF+ +  
Sbjct: 482 SLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIH 541

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G  P + TF +L+ GY    +  +A  +L  M + G+ P   T
Sbjct: 542 IGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVT 585



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/417 (25%), Positives = 197/417 (47%), Gaps = 7/417 (1%)

Query: 88  PQEAQAIFNNLIEGGHKPSLV-----TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS 142
           P    A+FN +      P +      TY  L+      +R +   + ++++   G+   +
Sbjct: 100 PALVLALFNRICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGT 159

Query: 143 IFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           I     +     +   +EA+D    +M E    P   +YNT+IK      + +E++ ++ 
Sbjct: 160 IQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQ 219

Query: 202 LMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
            M++EG    P++ ++N ++  +  +  +++A N+ ++M   G+ PDV TYN+I  A  +
Sbjct: 220 RMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCK 279

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
               D+AE V+ +M   GV+P+G T   II GY   G  KE+ +  R M   G+ P+ V 
Sbjct: 280 ARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVT 339

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           F+  +    +       +E+   M      PD+++YS +++ ++T G       +F  M 
Sbjct: 340 FSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMA 399

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             GI  + H  +IL   + +    ++A  +   M   G  PNVV ++T+IS +C  G + 
Sbjct: 400 DKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLA 459

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            A+E F +M   G+ PN   + +L+ G+       +A+E +  M + G+H     F 
Sbjct: 460 DAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFF 516



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 212/442 (47%), Gaps = 20/442 (4%)

Query: 66  KESCRTVRSMTK------------LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTL 113
           KES +  R MT              M+SL + G+ ++A+ IF  +   GH P +V+Y+ L
Sbjct: 319 KESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSIL 378

Query: 114 LAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL 173
           L     + RF  ++++   + + G+  +    N +I+A ++ G M+EAM  F +M+  G+
Sbjct: 379 LHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGV 438

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
            P   TY+TLI  +   G+  ++++    M   G ++PN   Y+ L+  +C   ++ +A 
Sbjct: 439 RPNVVTYSTLISAFCRMGRLADAMEKFSQMISIG-IEPNTAVYHSLIHGFCMHGDLVKAK 497

Query: 234 NVMHKMAASGM-KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
             + +M + G+ +P++V +++I  +    G    A++V   + H G +P   T   +I G
Sbjct: 498 EFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDG 557

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RV 349
           YC  GK+++A      M   G+ P++V  N L+ G+ +      +D+ L L +E    +V
Sbjct: 558 YCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCK---SGKIDDGLILFREMLHKKV 614

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            P  +TY+ +++    AG     K++F +M  +G   D   Y IL KG  R    ++A  
Sbjct: 615 KPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAIT 674

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L   +       ++ I  T+I+        + A ++F  +   G+ PN+ T+  ++    
Sbjct: 675 LFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLL 734

Query: 470 EARQPWRAEEILQIMKAFGVHP 491
           +      A+ +   M+  G  P
Sbjct: 735 KEGSVEEADTMFSSMEKSGCAP 756



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 78/337 (23%), Positives = 160/337 (47%), Gaps = 2/337 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+++    G+  +A   F+ +I  G +P+   Y +L+    +          +S
Sbjct: 442 VVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFIS 501

Query: 132 QVEENGMD-PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           ++   G+  P+ +FF+++I++    G + +A D F  +   G  PT  T+N+LI GY + 
Sbjct: 502 EMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLV 561

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK E++  +LD M   G ++P++ T N LV  +C    I +   +  +M    +KP  VT
Sbjct: 562 GKMEKAFGVLDAMVSVG-IEPDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVT 620

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +     + G    A+++  EM  +G   +  T  I++ G C+     EA+     + 
Sbjct: 621 YNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLG 680

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                 ++ I N +I    ++  R+  +++ A +    + P+V TY  ++      G ++
Sbjct: 681 AMDCKFDITILNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVE 740

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
           +   +F  M K+G  P +   + + +  +++ +  KA
Sbjct: 741 EADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 777



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/385 (24%), Positives = 162/385 (42%), Gaps = 39/385 (10%)

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
           T  TY  L+     A +P+     +  + R G +K         ++  C+ K   EA +V
Sbjct: 123 TVRTYGILMDCCCRARRPDLGPAFVARLLRAG-LKTGTIQATTFLKCLCHAKRTDEAVDV 181

Query: 236 M-HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG--VQPNGRTCGIIISG 292
           + H+M+     PD ++YNT+  +   +  + +A +++  M   G    P+  +   +I G
Sbjct: 182 LLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHG 241

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
           + K+G++ +A      M + GV P++  +N ++    +    D  + VL  M +  V PD
Sbjct: 242 FFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPD 301

Query: 353 VITYSTIMNAWSTAG--------------------------FMDK-CK--------EIFD 377
            +TY+ I++ +S +G                          FM   CK        EIF 
Sbjct: 302 GVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAEEIFQ 361

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G  PD  +YSIL  GY  E        L  +M + G   N      +IS     G
Sbjct: 362 YMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAHAKRG 421

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            MD A+ VF +M   GV PN+ T+ TL+  +    +   A E    M + G+ P  + + 
Sbjct: 422 MMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNTAVYH 481

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L       G   +AK  +S++ +K
Sbjct: 482 SLIHGFCMHGDLVKAKEFISEMMSK 506



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 100/228 (43%), Gaps = 1/228 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   + GK  +   +F  ++    KP+ VTY  +L  L    R ++   +  ++ ++G
Sbjct: 589 LVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSG 648

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              D   +  ++     +   +EA+  F K+         +  NT+I       + EE+ 
Sbjct: 649 TAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEAN 708

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   +S  G V PN+ TY V++R    E ++ EA  +   M  SG  P     N I   
Sbjct: 709 DLFAAISTSGLV-PNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRM 767

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
             Q G+  +A   + +++   +     T  +++S +  +GK +E ++F
Sbjct: 768 LLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKF 815



 Score = 44.7 bits (104), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           +  ++N+L +  + +EA  +F  +   G  P++ TY  ++  L  +       ++ S +E
Sbjct: 691 LNTMINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSME 750

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           ++G  P S   N +I    + G++ +A     K+  + ++   ST + L+  +   GK  
Sbjct: 751 KSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHR 810

Query: 195 ESVKLL 200
           E +K L
Sbjct: 811 EQIKFL 816


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 117/378 (30%), Positives = 197/378 (52%), Gaps = 6/378 (1%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           P+++ +N VI  F   G ++ A+D   +M+E  G+ P   TY T+I G+   G+ +E+VK
Sbjct: 517 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 576

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           + D M  +G VKP    YN L+  +C++  +  A     +M   G+   V TYN +  A 
Sbjct: 577 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 636

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
             +G   +A E++ EM   G+ P+  T  I+I+G+CKEG +K+AL     M   GV   +
Sbjct: 637 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 696

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           V +  LI    +       D++        + PD++ Y+ ++N+ ST+G +D+  EI  +
Sbjct: 697 VTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 756

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M K  I PD   Y+ L +G       ++A +L+  M E G  P++V + T+ISG+   G 
Sbjct: 757 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGD 816

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +  A+ + ++M   G +P L T+  L+ G  +  Q   AE +++ M   G+ P  ST++ 
Sbjct: 817 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 876

Query: 499 LAEARRATGLTKEAKRIL 516
           L E     GLT E +R +
Sbjct: 877 LIE-----GLTTEDERAI 889



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 202/394 (51%), Gaps = 7/394 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L   GKP  A  +   +     +P+ VTY T++A    + R  +   IM ++ E G
Sbjct: 494 MLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 549

Query: 138 -MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIAGKPEE 195
            + P+   +  VI+ + + G ++EA+  F +M   G + P    YN LI GY   GK + 
Sbjct: 550 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 609

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++   D M   G V   + TYN+LV A   +   TEA+ ++ +M   G+ PDV TYN + 
Sbjct: 610 ALLYRDRMVERG-VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 668

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + + G   +A E+   M   GV+    T   +I    K+G+++E  +        G+ 
Sbjct: 669 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIR 728

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+LV++N LI       + D   E++  M++ R+ PD +TY+T+M      G +D+ +++
Sbjct: 729 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 788

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            D+M + GI+PD   Y+ L  GY  + + + A  +   M+  GF+P ++ +  +I G C 
Sbjct: 789 IDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 848

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +G  D A  +  +M E+G++P+  T+ +L+ G +
Sbjct: 849 NGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 882



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 183/366 (50%), Gaps = 11/366 (3%)

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A   F  M    L   T+T+N +++    AGKP  +++LL  M R     PN  TYN ++
Sbjct: 472 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNTVI 526

Query: 221 RAWCNEKNITEAWNVMHKMAA-SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG- 278
             +C+   +  A ++M +M    G+ P+  TY T+ + + + G  D+A +V  EM   G 
Sbjct: 527 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 586

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           V+P       +I GYC +GK+  AL +   M E GV   +  +NLL+      MD  G +
Sbjct: 587 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL--FMDGRGTE 644

Query: 339 --EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             E++  M    + PDV TY+ ++N     G + K  EIF++M + G++     Y+ L  
Sbjct: 645 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIY 704

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
              ++ + ++ ++L    +  G  P++V++  +I+   + G++DRA E+  +M +  ++P
Sbjct: 705 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 764

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +  T+ TLM G     +   A +++  M   G+ P   T+  L       G  K+A RI 
Sbjct: 765 DDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIR 824

Query: 517 SKIKNK 522
           +++ NK
Sbjct: 825 NEMMNK 830



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 148/288 (51%), Gaps = 1/288 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+    ++GK   A    + ++E G   ++ TY  L+ AL +  R    + ++ ++   G
Sbjct: 597 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 656

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N +IN   + GN+++A++ F  M   G+  T  TY  LI      G+ +E+ 
Sbjct: 657 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETD 716

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL D   R G ++P+L  YN L+ +     NI  A+ +M +M    + PD VTYNT+   
Sbjct: 717 KLFDEAVRRG-IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 775

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G  D+A ++I EM   G+QP+  T   +ISGY  +G +K+ALR    M   G +P 
Sbjct: 776 LCLLGRVDEARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 835

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
           L+ +N LI+G  +    D  + ++  M E  + PD  TY +++   +T
Sbjct: 836 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 883



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 173/376 (46%), Gaps = 5/376 (1%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           FN ++     +G    A++   +M      P   TYNT+I G+   G+ + ++ ++  M 
Sbjct: 491 FNIMLRHLCSAGKPARALELLRQMPR----PNAVTYNTVIAGFCSRGRVQAALDIMREMR 546

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-MKPDVVTYNTIATAYAQNGE 263
             G + PN  TY  ++  WC    + EA  V  +M   G +KP+ V YN +   Y   G+
Sbjct: 547 ERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGK 606

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D A      M   GV     T  +++     +G+  EA      M   G+ P++  +N+
Sbjct: 607 LDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNI 666

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           LI G  +  +     E+   M    V   V+TY+ ++ A S  G + +  ++FD+  + G
Sbjct: 667 LINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRG 726

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           I+PD   Y+ L   +      ++A E++  M +    P+ V + T++ G C  G +D A 
Sbjct: 727 IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEAR 786

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           ++ D+M E G+ P+L T+ TL+ GYS       A  I   M   G +P   T+  L +  
Sbjct: 787 KLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGL 846

Query: 504 RATGLTKEAKRILSKI 519
              G   +A+ ++ ++
Sbjct: 847 CKNGQGDDAENMVKEM 862



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 156/327 (47%), Gaps = 2/327 (0%)

Query: 86  GKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
           G+  EA  +F+ ++  G  KP  V Y  L+     Q + ++      ++ E G+      
Sbjct: 569 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 628

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +N +++A    G   EA +   +M   GL P   TYN LI G+   G  ++++++ + MS
Sbjct: 629 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 688

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G V+  + TY  L+ A   +  + E   +  +    G++PD+V YN +  +++ +G  
Sbjct: 689 RRG-VRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 747

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           D+A E++ EME   + P+  T   ++ G C  G++ EA +    M E G+ P+LV +N L
Sbjct: 748 DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNTL 807

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G+    D      +   M     NP ++TY+ ++      G  D  + +  +M + GI
Sbjct: 808 ISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 867

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELL 411
            PD   Y  L +G   E E    +E L
Sbjct: 868 TPDDSTYISLIEGLTTEDERAIDDERL 894



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 101/189 (53%), Gaps = 2/189 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M++   R TV + T L+ +L ++G+ QE   +F+  +  G +P LV Y  L+ + +    
Sbjct: 687 MSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 746

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    IM ++E+  + PD + +N ++      G ++EA     +M E G+ P   TYNT
Sbjct: 747 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTERGIQPDLVTYNT 806

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY + G  ++++++ + M  +G   P L TYN L++  C      +A N++ +M  +
Sbjct: 807 LISGYSMKGDVKDALRIRNEMMNKG-FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 865

Query: 243 GMKPDVVTY 251
           G+ PD  TY
Sbjct: 866 GITPDDSTY 874


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/433 (29%), Positives = 214/433 (49%), Gaps = 13/433 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L +  +P  AQ +F ++      PS+VTY TLL  L    R   +   M+
Sbjct: 10  VVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLF---RTGKLERAMA 66

Query: 132 QVEE--NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             +E  +    D I FN ++     +G +E A++ F KM +   +P   TY+ LI G   
Sbjct: 67  LFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVITYSVLIDGLCK 125

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           A +  ++V+LL+ M   G   P++ TY +LV   C E  +  AW V+ +M  +G  P++V
Sbjct: 126 ANRVSQAVELLESMKARG-CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLV 184

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN++     +      A  ++ +M   G  PN  T G +I G CK G++K+A      M
Sbjct: 185 TYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADM 244

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTA 366
            + G  P+L+I+N+LI G  +    D VDE +AL++      + PDV+TYS+++     +
Sbjct: 245 IDKGGTPDLMIYNMLINGLCK---ADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 301

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             +D+   +   +   G  PD   YS L  G  +  + ++A +L   M   G   +VV +
Sbjct: 302 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTY 361

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           +T+I G C  G +D A  +  +M   G  P+  T+ +L+ G  +      A E+++ M+ 
Sbjct: 362 STLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMER 421

Query: 487 FGVHPQKSTFLLL 499
               P   T+ +L
Sbjct: 422 SNCAPSAVTYNIL 434



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 105/395 (26%), Positives = 188/395 (47%), Gaps = 3/395 (0%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G +P++VTY +L+  L      +    +   ++     P  + +N +++    +G +E A
Sbjct: 5   GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           M  F +M +   +    ++N L+ G   AGK E +++    M  +    PN+ TY+VL+ 
Sbjct: 65  MALFQEMLDRR-SHDVISFNILVTGLCRAGKIETALEFFRKM--DDRCSPNVITYSVLID 121

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C    +++A  ++  M A G  PDV+TY  +     +  +   A EV+ EM   G  P
Sbjct: 122 GLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVP 181

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N  T   ++ G C+  ++ +AL   R M   G  PN+V +  LI G  ++        +L
Sbjct: 182 NLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAML 241

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
           A M +    PD++ Y+ ++N    A  +D+   +       GIKPD   YS +  G  R 
Sbjct: 242 ADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRS 301

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
              ++A  LL+ +   G  P+V++++T+I G C  G +D A ++++ M   G   ++ T+
Sbjct: 302 NRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTY 361

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            TL+ G  +A +   A  +L  M   G  P   T+
Sbjct: 362 STLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTY 396



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 171/350 (48%), Gaps = 3/350 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++ L +  K   A  +   +++ G  P+LVTY +LL  L   +R +   ++M 
Sbjct: 148 VITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMR 207

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  P+ + +  +I+   + G +++A      M + G TP    YN LI G   A 
Sbjct: 208 DMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKAD 267

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +ES+ LL   +  G +KP++ TY+ ++   C    + EA  ++  + + G  PDV+ Y
Sbjct: 268 QVDESIALLR-RAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILY 326

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +T+     + G+ D+A ++   M  +G   +  T   +I G CK G++ EA      M  
Sbjct: 327 STLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVR 386

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P+ + +N LIKG  ++   D   E++  M+     P  +TY+ +++       +D 
Sbjct: 387 MGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDS 446

Query: 372 CK-EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT-MIESGF 419
              + F +M   G+ PD   YSIL +G  + ++  +   L++  M++ G+
Sbjct: 447 AALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGY 496



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 122/258 (47%), Gaps = 8/258 (3%)

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M  +G +PN  T   +I G CK  +   A      MK     P++V +N L+ G      
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLF---- 56

Query: 334 RDG-VDEVLALMKEF--RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           R G ++  +AL +E   R + DVI+++ ++     AG ++   E F  M      P+   
Sbjct: 57  RTGKLERAMALFQEMLDRRSHDVISFNILVTGLCRAGKIETALEFFRKMDDR-CSPNVIT 115

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YS+L  G  +     +A ELL +M   G  P+V+ +T ++ G C +  +  A EV  +M 
Sbjct: 116 YSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREML 175

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           + G  PNL T+ +L+ G   AR+   A  +++ M   G  P   T+  L +     G  K
Sbjct: 176 DAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVK 235

Query: 511 EAKRILSKIKNKERTNEM 528
           +A  +L+ + +K  T ++
Sbjct: 236 DACAMLADMIDKGGTPDL 253


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 228/488 (46%), Gaps = 37/488 (7%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C  + +  K++N   + G  +EA    + ++E G  P   TYT+L+     +K  +S   
Sbjct: 215 CPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFK 274

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +  ++   G   + + +  +I+       ++EAMD F KMK+    PT  TY  LIK   
Sbjct: 275 VFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALC 334

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            + +  E++ L+  M  +G +KPN+ TY VL+ + C++  + +A  ++ +M   G+ P+V
Sbjct: 335 GSERKSEALNLVKEMEEKG-IKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNV 393

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           +TYN +   Y + G  + A +V+  ME   ++PN RT   +I GYCK   + +A+     
Sbjct: 394 ITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNK 452

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M E  V P++V +N LI G     + D    +L+LM +  + PD  TY++++++   +  
Sbjct: 453 MLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKR 512

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +++  ++FD + +  + P+   Y+ L  GY +  +  +A  +L  M+     PN + F  
Sbjct: 513 VEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNA 572

Query: 429 IISGWCSDGSM-----------------------------------DRAIEVFDKMCEHG 453
           +I G C+DG +                                   D A   F +M   G
Sbjct: 573 LIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSG 632

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
             P+  T+ T +  Y    +   AE+++  MK  GV P   T+  L +     G T  A 
Sbjct: 633 TKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAF 692

Query: 514 RILSKIKN 521
            +L ++ +
Sbjct: 693 VVLKRMHD 700



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 226/430 (52%), Gaps = 2/430 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R   + T L++ L    +  EA  +F  + +    P++ TYT L+ AL   +R +   ++
Sbjct: 286 RNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNL 345

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++EE G+ P+   +  +I++      +E+A +   +M E GL P   TYN LI GY  
Sbjct: 346 VKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCK 405

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G  E+++ +++LM    N++PN RTYN L++ +C ++N+ +A  V++KM    + PDVV
Sbjct: 406 RGMIEDALDVVELMESR-NLRPNTRTYNELIKGYC-KRNVHKAMGVLNKMLERKVLPDVV 463

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN++     ++G  D A  ++  M   G+ P+  T   +I   CK  +++EA     ++
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSL 523

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           ++  V PN+V++  LI G+ +    +    +L  M      P+ +T++ +++   T G +
Sbjct: 524 EQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKL 583

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +   + + M K  ++P     +IL    +++ + + A      M+ SG  P+   +TT 
Sbjct: 584 KEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTF 643

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I  +C +G +  A ++  KM E+GVSP+L T+ +L+ GY +  +   A  +L+ M   G 
Sbjct: 644 IQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGC 703

Query: 490 HPQKSTFLLL 499
            P + TFL L
Sbjct: 704 EPSQHTFLSL 713



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 151/553 (27%), Positives = 247/553 (44%), Gaps = 66/553 (11%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  + C  TVR+ T L+ +L    +  EA  +   + E G KP++ TYT L+ +L  Q +
Sbjct: 314 MKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCK 373

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 ++ Q+ E G+ P+ I +NA+IN + + G +E+A+D    M+   L P T TYN 
Sbjct: 374 LEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNE 433

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LIKGY       +++ +L+ M  E  V P++ TYN L+   C   N   A+ ++  M   
Sbjct: 434 LIKGY-CKRNVHKAMGVLNKM-LERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDR 491

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ PD  TY ++  +  ++   ++A ++   +E   V PN      +I GYCK GK+ EA
Sbjct: 492 GLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEA 551

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE----FRVNPDVITYST 358
                 M      PN + FN LI G       DG  +   L++E      + P V T + 
Sbjct: 552 HLMLEKMLSKNCLPNSLTFNALIHGLCT----DGKLKEATLLEEKMVKIDLQPTVSTDTI 607

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++     G  D     F  M  +G KPDAH Y+   + Y RE   + AE+++  M E+G
Sbjct: 608 LIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMVAKMKENG 667

Query: 419 FHPNVVIFTTIIS----------------------------------------------- 431
             P++  ++++I                                                
Sbjct: 668 VSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEMKYGKVKG 727

Query: 432 ---GWCSDGSM---DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
              G C   +M   D  +E+ +KM EHGV+PN K++E LM G  E      AE++   M+
Sbjct: 728 GEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQ 787

Query: 486 AF-GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYH 544
              G+ P +  F  L           EA +++  +       ++E+ + I +  L +   
Sbjct: 788 QKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCK-ILICRLYKKGE 846

Query: 545 KEATTASYPNLLQ 557
           KE  T+ + NLLQ
Sbjct: 847 KERGTSVFQNLLQ 859



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 210/437 (48%), Gaps = 2/437 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+NSL   G   E + ++  ++E    P++ TY  ++            +  +S + E G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAG 248

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +DPD   + ++I  + +  +++ A   F +M   G       Y  LI G  +  + +E++
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAM 308

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M ++ +  P +RTY VL++A C  +  +EA N++ +M   G+KP++ TY  +  +
Sbjct: 309 DLFVKM-KDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDS 367

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                + ++A E++ +M   G+ PN  T   +I+GYCK G I++AL     M+   + PN
Sbjct: 368 LCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPN 427

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +N LIKG+ +      +  VL  M E +V PDV+TY+++++    +G  D    +  
Sbjct: 428 TRTYNELIKGYCKRNVHKAMG-VLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G+ PD   Y+ +     + +  E+A +L  ++ +    PNVV++T +I G+C  G
Sbjct: 487 LMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAG 546

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ A  + +KM      PN  TF  L+ G     +   A  + + M    + P  ST  
Sbjct: 547 KVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDT 606

Query: 498 LLAEARRATGLTKEAKR 514
           +L       G    A R
Sbjct: 607 ILIHRLLKDGDFDHAYR 623



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 113/490 (23%), Positives = 201/490 (41%), Gaps = 93/490 (18%)

Query: 70  RTVRSMTKLMNSLIE---RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           R +R  T+  N LI+   +    +A  + N ++E    P +VTY +L+        F+S 
Sbjct: 422 RNLRPNTRTYNELIKGYCKRNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSA 481

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
           + ++S + + G+ PD   + ++I++  +S  +EEA D F  +++  + P    Y  LI G
Sbjct: 482 YRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDG 541

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA-------------- 232
           Y  AGK  E+  +L+ M  + N  PN  T+N L+   C +  + EA              
Sbjct: 542 YCKAGKVNEAHLMLEKMLSK-NCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQP 600

Query: 233 ---------------------WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
                                +    +M +SG KPD  TY T    Y + G    AE+++
Sbjct: 601 TVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAEDMV 660

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            +M+ NGV P+  T   +I GY   G+   A    + M + G  P+   F  LIK  +E+
Sbjct: 661 AKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLLEM 720

Query: 332 ------------------MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM---- 369
                             M+ D V E+L  M E  V P+  +Y  +M      G +    
Sbjct: 721 KYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAE 780

Query: 370 --------------------------------DKCKEIFDDMGKAGIKPDAHAYSILAKG 397
                                           ++  ++ DDM   G  P   +  IL   
Sbjct: 781 KVFDHMQQKEGISPSELVFNALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICR 840

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             ++ E E+   +   +++ G++ + + +  II G    G ++   E+F+ M ++G + +
Sbjct: 841 LYKKGEKERGTSVFQNLLQCGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFS 900

Query: 458 LKTFETLMWG 467
            +T+  L+ G
Sbjct: 901 SQTYSLLIEG 910



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/456 (23%), Positives = 195/456 (42%), Gaps = 49/456 (10%)

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSI-MSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           +K S+ +Y +LL  L        +  I +  ++      D++F    +       N +E+
Sbjct: 119 YKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVADTLF----VLDLCRKMNKDES 174

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
            +  +K+           YNTL+      G  +E +K + +   E  V PN+ TYN +V 
Sbjct: 175 FELKYKL-------IIGCYNTLLNSLARFGLVDE-MKQVYMEMLEDKVCPNIYTYNKMVN 226

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ- 280
            +C   N+ EA   +  +  +G+ PD  TY ++   Y Q  + D A +V  EM   G + 
Sbjct: 227 GYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRR 286

Query: 281 ----------------------------------PNGRTCGIIISGYCKEGKIKEALRFA 306
                                             P  RT  ++I   C   +  EAL   
Sbjct: 287 NEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLV 346

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
           + M+E G+ PN+  + +LI         +   E+L  M E  + P+VITY+ ++N +   
Sbjct: 347 KEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKR 406

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G ++   ++ + M    ++P+   Y+ L KGY + +   KA  +L  M+E    P+VV +
Sbjct: 407 GMIEDALDVVELMESRNLRPNTRTYNELIKGYCK-RNVHKAMGVLNKMLERKVLPDVVTY 465

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            ++I G C  G+ D A  +   M + G+ P+  T+ +++    ++++   A ++   ++ 
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQ 525

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             V P    +  L +     G   EA  +L K+ +K
Sbjct: 526 KDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSK 561


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 248/486 (51%), Gaps = 35/486 (7%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++ + + +G   EA  +   +I  G   +LV  T+L+     Q   +S  ++ +++
Sbjct: 332 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 391

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY------ 187
            E+G+ P+ + ++ +I     SGN+E+A + + +MK +G+ P+    N+L++GY      
Sbjct: 392 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 451

Query: 188 -------------GIA---------------GKPEESVKLLDLMSREGNVKPNLRTYNVL 219
                        G+A               GK +E+  LLD M  +G V PN+ +YN +
Sbjct: 452 EEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV-PNVVSYNDM 510

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +   C + N+  A +V   M A  +KP+VVTY+ +     + G++++A ++  +M    +
Sbjct: 511 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 570

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            P   T   II+G CK G++ EA    +   E G  P+ + +N ++ GF++  + D    
Sbjct: 571 APTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 630

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           V   M EF V+P+V+TY++++N +  +  +D   +  D+M + G++ D  AYS L  G+ 
Sbjct: 631 VYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFC 690

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           + ++ E A++L   ++E G  PN +++ ++ISG+    +M+ A+  + KM    +  +L 
Sbjct: 691 KRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLG 750

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+ TL+ G  +  +   A ++   M + G+ P   TF +L       G  + A++IL ++
Sbjct: 751 TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEM 810

Query: 520 KNKERT 525
             K  T
Sbjct: 811 DRKNMT 816



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 200/396 (50%), Gaps = 2/396 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ + ++ G+ +EA+  F    E G K     Y+ ++ A+  +   N    ++ +++E G
Sbjct: 266 MVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELLEEMKERG 325

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P    F +VI A    GNM EA+    +M   G         +L+KGY   G  + ++
Sbjct: 326 WVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSAL 385

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L + ++ +G + PN  TY+VL+   CN  NI +A  +  +M  +G+ P V   N++   
Sbjct: 386 NLFNKITEDG-LFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRG 444

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y +    ++A ++  E    GV  N  T  I++S  CK GK+ EA      M   G+ PN
Sbjct: 445 YLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPN 503

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N +I G     + D    V + M    + P+V+TYS +++     G  +K  ++FD
Sbjct: 504 VVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFD 563

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M    I P    ++ +  G  +  +  +A + L   +E GF P+ + + +I+ G+  +G
Sbjct: 564 QMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEG 623

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           ++D A+ V+ +MCE GVSPN+ T+ +L+ G+ ++ +
Sbjct: 624 NIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNR 659



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 205/433 (47%), Gaps = 2/433 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V ++  L+   ++    +EA  +F+  ++ G   ++ TY  +++ L    + +   S++
Sbjct: 434 SVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLL 492

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   GM P+ + +N +I      GNM+ A   F  M    L P   TY+ LI G    
Sbjct: 493 DNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKK 552

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E+++ L D M    N+ P   T+N ++   C    ++EA + +      G  P  +T
Sbjct: 553 GDSEKALDLFDQM-LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 611

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN+I   + + G  D A  V  EM   GV PN  T   +I+G+CK  +I  AL+    M+
Sbjct: 612 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 671

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G+  ++  ++ LI GF +  D +   ++   + E  ++P+ I Y+++++ +     M+
Sbjct: 672 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 731

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                +  M    I  D   Y+ L  G ++E     A +L M M+  G  P+++ F  ++
Sbjct: 732 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 791

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G C+ G ++ A ++ ++M    ++P++  + TL+ GY        A  +   M   G+ 
Sbjct: 792 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 851

Query: 491 PQKSTFLLLAEAR 503
           P   T+ +L   +
Sbjct: 852 PDDVTYDILINGK 864



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/430 (23%), Positives = 183/430 (42%), Gaps = 17/430 (3%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
            A+ + N  + G   PS V +   L  +   KRF+              + D   FN ++
Sbjct: 153 HARKLLNRYVSGDSDPSPVVFVDHL--INCAKRFD-------------FELDHRVFNYLL 197

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           NA+  +  +E A+D F  M    + P     N L+          E   L + M   G +
Sbjct: 198 NAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG-I 256

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
             +  T +V+VRA   E  + EA     +    G+K D   Y+ I  A  +   ++   E
Sbjct: 257 YGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLE 316

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           ++ EM+  G  P+  T   +I     +G + EALR    M   G   NLV+   L+KG+ 
Sbjct: 317 LLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYC 376

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
              + D    +   + E  + P+ +TYS ++     +G ++K  E++  M   GI P   
Sbjct: 377 AQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVF 436

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
             + L +GY++    E+A +L    ++ G   N+  +  ++S  C  G MD A  + D M
Sbjct: 437 NVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNM 495

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G+ PN+ ++  ++ G+        A  +   M A  + P   T+ +L +     G +
Sbjct: 496 VNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDS 555

Query: 510 KEAKRILSKI 519
           ++A  +  ++
Sbjct: 556 EKALDLFDQM 565



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 37/259 (14%)

Query: 68  SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           SC T  S   +++  I+ G    A A++  + E G  P++VTYT+L+       R +   
Sbjct: 608 SCMTYNS---IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 664

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
               ++ E G++ D   ++A+I+ F +  +ME A D F+++ E GL+P    YN++I G+
Sbjct: 665 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 724

Query: 188 GIAGKPEESV-------------------KLLDLMSREGN---------------VKPNL 213
                 E ++                    L+D + +EG                + P++
Sbjct: 725 RDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDI 784

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            T++VLV   CN+  +  A  ++ +M    M P V+ YNT+   Y + G   +A  +  E
Sbjct: 785 ITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDE 844

Query: 274 MEHNGVQPNGRTCGIIISG 292
           M   G+ P+  T  I+I+G
Sbjct: 845 MLDRGLVPDDVTYDILING 863


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 225/484 (46%), Gaps = 41/484 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L +  + ++A      ++  G  P + TYT ++ AL ++ R +     + ++
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
               + P+ + +  +I+   + G ++EA+    KM++    PT  TYN+LI G   A + 
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK-CVPTAVTYNSLISGLCKAERA 131

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+  LL+ M   G + P++ TY  L+  +C  K   +A  V  ++ A G +PDVVTY+ 
Sbjct: 132 SEAYDLLEEMVYSGCI-PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190

Query: 254 IATAYAQNGEADQAEEVIVEMEHNG-VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           +     + G   +A ++   M  +G   PN  T   +ISG+C+ GK+ EA+     M E 
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G  P++V +  L+ GF ++   D   ++L  M    + PDV+T++++M+       +   
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL--------------------- 411
             I  +M +    P  + Y+ +  GY R  + E+A + +                     
Sbjct: 311 VHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLC 370

Query: 412 --------MTMIESG----FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH-GVSPNL 458
                   M ++E       +P+VV++TT+I G C +  +D A  V+ KM E  G  PN 
Sbjct: 371 KVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNS 430

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+ TL+ G   A    RA   ++     G  P   T+ LL +A R     ++A+ +L  
Sbjct: 431 ITYSTLITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLDD 486

Query: 519 IKNK 522
           +  +
Sbjct: 487 MVQR 490



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 195/408 (47%), Gaps = 10/408 (2%)

Query: 107 LVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW 166
            VTYT+L+  L   KR       + ++   G  PD   + AVI+A      + EA     
Sbjct: 11  FVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLE 70

Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
           +M    LTP   TY  LI G    G+ +E+V LL  M ++    P   TYN L+   C  
Sbjct: 71  EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK--CVPTAVTYNSLISGLCKA 128

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           +  +EA++++ +M  SG  PD+ TY T+ T + ++ ++D A  V  ++   G +P+  T 
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 287 GIIISGYCKEGKIKEALR-FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
             +I G CKEG++KEA+  F R +K     PN V +N LI GF  +   D    +L  M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           E   +PDV+TY+T+MN +     +D   ++ + M + G+ PD   ++ L  G  RE    
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
            A  +L  M      P V  + TI+ G+C    ++ A +   +  E    PN+ +F  ++
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMI 366

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            G  +  +   A E+++  +    +P    +  + +     GL +E K
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID-----GLCREKK 409



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 211/429 (49%), Gaps = 46/429 (10%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M K+   T  +   L++ L +  +  EA  +   ++  G  P + TYTTL+      K+ 
Sbjct: 107 MRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKS 166

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNT 182
           +    +  Q+   G  PD + ++ +I+   + G ++EA+D F +M +SG   P T TYN+
Sbjct: 167 DDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNS 226

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+   GK +E++ LL+ M+  G+  P++ TY  L+  +C    + +A++++++M   
Sbjct: 227 LISGFCRMGKMDEAMNLLERMAETGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ PDVVT+ ++     +      A  ++ EM      P   T   I+ GYC+  +++EA
Sbjct: 286 GLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA 345

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
            +F   ++E    PN+V FN++I+G  ++       E++   +  R NPDV+ Y+T+++ 
Sbjct: 346 RKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID- 402

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES-GFHP 421
                                             G  RE++ ++A  +   M+E  G  P
Sbjct: 403 ----------------------------------GLCREKKVDEACRVYRKMLEEPGCLP 428

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           N + ++T+I+G C+ G +DRA    +K    G  PN+ T+  L+  + +A +   A E+L
Sbjct: 429 NSITYSTLITGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELL 484

Query: 482 QIM--KAFG 488
             M  + FG
Sbjct: 485 DDMVQRGFG 493



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 200/431 (46%), Gaps = 6/431 (1%)

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           V  N    D + + ++I    +   +E+A+    KM   G  P   TY  +I    +  +
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             E+ K L+ M+   N+ PN+ TY VL+   C    + EA  ++ KM    + P  VTYN
Sbjct: 62  LHEARKFLEEMANR-NLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++ +   +   A +A +++ EM ++G  P+  T   +I+G+CK  K  +ALR    +   
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 313 GVHPNLVIFNLLIKGFV-EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           G  P++V ++ LI G   E   ++ +D    ++K     P+ +TY+++++ +   G MD+
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + + M + G  PD   Y+ L  G+ +    + A +LL  M   G  P+VV FT+++ 
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C +  +  A+ +  +M     SP + T+ T++ GY  A Q   A + +  ++     P
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPP 357

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTAS 551
              +F ++         + EA  ++ + + + R N         ++ L R    +     
Sbjct: 358 NVVSFNIMIRGLCKVNRSSEAMELVEEAR-RRRCNPDVVMYTTVIDGLCREKKVDEACRV 416

Query: 552 YPNLLQIPNVV 562
           Y  +L+ P  +
Sbjct: 417 YRKMLEEPGCL 427


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 231/484 (47%), Gaps = 37/484 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV + + ++N L   G  Q   AI   ++  G KP+ V YTTL+ A   + R      I+
Sbjct: 424 TVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 483

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ E G+ PD   +N++I  F ++  MEEA     +M E  L P   TY   I GY  A
Sbjct: 484 ERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKA 543

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ E + +  + M   G V PN+  Y  L+   C E N+TEA++V   + +  +  DV T
Sbjct: 544 GEMEIADRYFNEMLSCG-VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 602

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +    ++NG+  +A  +  E++  G+ PN  T   +ISG CK+G + +A +    M 
Sbjct: 603 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 662

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G++P++V +N+LI G  +  + +    +   ++   + P+ +TY+ +++ +  +    
Sbjct: 663 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 722

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              ++ ++M   G+ PDA  Y+++     +E++ EKA +L   M+E GF  + V F T+I
Sbjct: 723 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLI 781

Query: 431 SGWCSDGSMDRAIEVFDKM-------------------CEHG----------------VS 455
            G+C  G +  A  + ++M                   C+ G                V 
Sbjct: 782 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 841

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P  KT+ +L+ GY           + + M A G+ P K T+ ++ +A    G   EA ++
Sbjct: 842 PTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKL 901

Query: 516 LSKI 519
             +I
Sbjct: 902 KDEI 905



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 219/454 (48%), Gaps = 36/454 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N      + +EA+ +   +I+ G KP  +TY  L+     Q        I  ++   G
Sbjct: 291 LINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACG 350

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++ + I +N ++N   ++G ME+A++   +M E G+ P + TY+ LI+G+        + 
Sbjct: 351 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 410

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LLD M +   + P + TY+V++   C   N+     ++ +M  +G+KP+ V Y T+ TA
Sbjct: 411 ELLDEMKKR-KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTA 469

Query: 258 YAQNGEADQAEEVIVEMEHNGV-----------------------------------QPN 282
           +A+ G  +++  ++  M   G+                                   +PN
Sbjct: 470 HAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 529

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T G  I GY K G+++ A R+   M   GV PN+ I+  LI+G  +  +      V  
Sbjct: 530 AHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 589

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            +   RV  DV TYS +++  S  G M +   IF ++ + G+ P+A  Y+ L  G  ++ 
Sbjct: 590 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 649

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             +KA +LL  M   G +P++V +  +I G C  G ++RA  +FD +   G++PN  T+ 
Sbjct: 650 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 709

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            ++ GY +++ P  A ++L+ M   GV P    +
Sbjct: 710 AMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIY 743



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 223/436 (51%), Gaps = 1/436 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           EA  +  ++++ G  P L TY  L+    ++KR      ++ ++ + G+ P+ I +NA+I
Sbjct: 268 EAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALI 327

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           + F   G++E+A     +M   G+      +NTL+ G   AGK E++++++  M  +G V
Sbjct: 328 DGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKG-V 386

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +P+ +TY++L+   C  +N+  A+ ++ +M    + P V+TY+ I     + G       
Sbjct: 387 EPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNA 446

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           ++ EM  NG++PN      +++ + KEG+++E+      M+E G+ P++  +N LI GF 
Sbjct: 447 ILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFC 506

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +    +     L  M E R+ P+  TY   ++ +S AG M+     F++M   G+ P+  
Sbjct: 507 KAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVG 566

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+ L +G+ +E    +A  +   ++      +V  ++ +I G   +G M  A  +F ++
Sbjct: 567 IYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSEL 626

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
            E G+ PN  T+ +L+ G  +     +A ++L+ M   G++P   T+ +L +     G  
Sbjct: 627 QEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEI 686

Query: 510 KEAKRILSKIKNKERT 525
           + AK +   I+ +  T
Sbjct: 687 ERAKNLFDDIEGRGLT 702



 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 222/473 (46%), Gaps = 37/473 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N + + GK ++A  I   ++E G +P   TY+ L+      +       ++ ++++  
Sbjct: 361 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK 420

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P  + ++ +IN     GN++       +M  +GL P    Y TL+  +   G+ EES 
Sbjct: 421 LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 480

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L+ M RE  + P++  YN L+  +C  K + EA   + +M    ++P+  TY      
Sbjct: 481 MILERM-REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 539

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR---------- 307
           Y++ GE + A+    EM   GV PN      +I G+CKEG + EA    R          
Sbjct: 540 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 599

Query: 308 -------------------------TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
                                     ++E G+ PN   +N LI G  +  + D   ++L 
Sbjct: 600 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 659

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M    +NPD++TY+ +++    AG +++ K +FDD+   G+ P+   Y+ +  GY + +
Sbjct: 660 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 719

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
            P  A +LL  M+  G  P+  I+  I++  C +   ++A+++F +M E G +  + +F 
Sbjct: 720 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFN 778

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           TL+ GY ++ +   A  +L+ M      P   T+  L +     G+  EAKR+
Sbjct: 779 TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL 831



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 223/452 (49%), Gaps = 1/452 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LM+S  + G   EA  +F        +PSL++  +LL  L    +      +   +  + 
Sbjct: 151 LMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHK 210

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +  +I+A  + GN+++A     +M E G +P   TYN +I G   A   +E++
Sbjct: 211 VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAI 270

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L   M  +G V P+L TY++L+  +C EK   EA  ++ +M   G+KP+ +TYN +   
Sbjct: 271 ELKRSMVDKGLV-PDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDG 329

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G+ +QA  +  EM   G++ N      +++G CK GK+++AL   + M E GV P+
Sbjct: 330 FMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPD 389

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              ++LLI+G     +     E+L  MK+ ++ P V+TYS I+N     G +     I  
Sbjct: 390 SQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILR 449

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G+KP+A  Y+ L   + +E   E++  +L  M E G  P+V  + ++I G+C   
Sbjct: 450 EMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAK 509

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M+ A     +M E  + PN  T+   + GYS+A +   A+     M + GV P    + 
Sbjct: 510 RMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYT 569

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNEME 529
            L E     G   EA  +   I ++    +++
Sbjct: 570 ALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQ 601



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 222/452 (49%), Gaps = 1/452 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ S   L+  L++  K +    +F+ +      P + TYT +++A            ++
Sbjct: 179 SLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVL 238

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ E G  P+ + +N +I     +  ++EA++    M + GL P   TY+ LI G+ + 
Sbjct: 239 LEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCME 298

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +  E+ KL+ L   +  +KP   TYN L+  +  + +I +A+ +  +M A G++ +++ 
Sbjct: 299 KRSREA-KLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLII 357

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +NT+     + G+ ++A E++ EM   GV+P+ +T  ++I G+C+   +  A      MK
Sbjct: 358 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 417

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           +  + P ++ ++++I G     +  G + +L  M    + P+ + Y+T+M A +  G ++
Sbjct: 418 KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE 477

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + + I + M + GI PD   Y+ L  G+ + +  E+A   LM M+E    PN   +   I
Sbjct: 478 ESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFI 537

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+   G M+ A   F++M   GV PN+  +  L+ G+ +      A  + + + +  V 
Sbjct: 538 DGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVL 597

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
               T+ +L       G   EA  I S+++ K
Sbjct: 598 QDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK 629



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 204/424 (48%), Gaps = 4/424 (0%)

Query: 62   FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
            F +++   + V++ + L++ L   GK  EA  IF+ L E G  P+  TY +L++    Q 
Sbjct: 590  FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 649

Query: 122  RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
              +    ++ ++   G++PD + +N +I+   ++G +E A + F  ++  GLTP   TY 
Sbjct: 650  NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 709

Query: 182  TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
             ++ GY  +  P  + +LL+ M   G V P+   YNV++   C E+   +A ++  +M  
Sbjct: 710  AMVDGYCKSKNPTAAFQLLEEMLLRG-VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 768

Query: 242  SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
             G     V++NT+   Y ++G+  +A  ++ EM      PN  T   +I   CK G + E
Sbjct: 769  KGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGE 827

Query: 302  ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
            A R    M+E  V P    +  L+ G+  I +   V  +   M    + PD +TY  +++
Sbjct: 828  AKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMID 887

Query: 362  AWSTAG-FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
            A+   G  M+ CK + D++   G+     AY  L +   +++E  +  +LL  + ESGF 
Sbjct: 888  AYCREGNVMEACK-LKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFR 946

Query: 421  PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
              +   + I  G+   G+MD A EV   M + G   N  +   L+ G         ++ +
Sbjct: 947  LGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNL 1006

Query: 481  LQIM 484
            L+ M
Sbjct: 1007 LKQM 1010



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 191/413 (46%), Gaps = 2/413 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L+    + G   EA ++F  ++       + TY+ L+  L+   + +    I S+++E
Sbjct: 569 TALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQE 628

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ P++  +N++I+   + GN+++A     +M   G+ P   TYN LI G   AG+ E 
Sbjct: 629 KGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIER 688

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  L D +   G + PN  TY  +V  +C  KN T A+ ++ +M   G+ PD   YN I 
Sbjct: 689 AKNLFDDIEGRG-LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 747

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               +  + ++A ++  EM   G      +   +I GYCK GK++EA      M E    
Sbjct: 748 NFCCKEEKFEKALDLFQEMLEKGFAST-VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 806

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN V +  LI    +         +   M+E  V P   TY+++++ +   G M +   +
Sbjct: 807 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 866

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F++M   GI+PD   Y ++   Y RE    +A +L   ++  G   +V  +  +I   C 
Sbjct: 867 FEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCK 926

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
                  +++ +++ E G    L T   +  G+  A     A E+L+ M  FG
Sbjct: 927 KEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 979



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 205/431 (47%), Gaps = 2/431 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+ + A   FN ++  G  P++  YT L+     +       S+   +    +  D   +
Sbjct: 544 GEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTY 603

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           + +I+  S +G M EA   F +++E GL P   TYN+LI G    G  +++ +LL+ M  
Sbjct: 604 SVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCI 663

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G + P++ TYN+L+   C    I  A N+   +   G+ P+ VTY  +   Y ++    
Sbjct: 664 KG-INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 722

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A +++ EM   GV P+     +I++  CKE K ++AL   + M E G   + V FN LI
Sbjct: 723 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKG-FASTVSFNTLI 781

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           +G+ +       + +L  M E +  P+ +TY+++++    AG M + K ++ +M +  + 
Sbjct: 782 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 841

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P A  Y+ L  GY       +   L   M+  G  P+ + +  +I  +C +G++  A ++
Sbjct: 842 PTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKL 901

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
            D++   G+  ++  ++ L+    +  + +   ++L  +   G      T  ++A   + 
Sbjct: 902 KDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQI 961

Query: 506 TGLTKEAKRIL 516
            G   EA  +L
Sbjct: 962 AGNMDEAAEVL 972



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/292 (27%), Positives = 146/292 (50%)

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R  N  PN   +++L+ ++     + EA NV         +P +++ N++     +  + 
Sbjct: 137 RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKV 196

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           +   +V   M  + V P+  T   +IS +CK G +K+A R    M E G  PNLV +N++
Sbjct: 197 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVI 256

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G       D   E+   M +  + PD+ TY  ++N +       + K +  +M   G+
Sbjct: 257 IGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGL 316

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           KP+   Y+ L  G++R+ + E+A  +   M+  G   N++I+ T+++G C  G M++A+E
Sbjct: 317 KPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALE 376

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           +  +M E GV P+ +T+  L+ G+   +   RA E+L  MK   + P   T+
Sbjct: 377 IMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTY 428



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 132/276 (47%), Gaps = 7/276 (2%)

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P+ V ++ +  +Y + G   +A  V +  ++   +P+  +C  ++    K  K++   + 
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              M  + V P++  +  +I    ++ +      VL  M E   +P+++TY+ I+     
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
           A  +D+  E+   M   G+ PD + Y IL  G+  E+   +A+ +L+ MI+ G  P  + 
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +  +I G+   G +++A  + D+M   G+  NL  + TL+ G  +A +  +A EI+Q M 
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382

Query: 486 AFGVHPQKSTFLLLAEAR-------RATGLTKEAKR 514
             GV P   T+ LL E         RA  L  E K+
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKK 418



 Score = 44.3 bits (103), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 58/127 (45%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            ++++    G   EA  + + ++  G   S+  Y  L+ AL  ++ F  +  +++++ E+G
Sbjct: 885  MIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESG 944

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
                    + +   F  +GNM+EA +    M + G    T++   L+ G       E+S 
Sbjct: 945  FRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSD 1004

Query: 198  KLLDLMS 204
             LL  M+
Sbjct: 1005 NLLKQMA 1011


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 219/445 (49%), Gaps = 9/445 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L   G+  EA+ +  +      +P +++Y  ++A   +  + ++   +++ +    
Sbjct: 96  LIKKLCASGRTAEARRVLASC-----EPDVMSYNAMVAGYCVTGQLDNARRLVAAMP--- 147

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M+PD+  +N +I      G  + A+     M   G  P   TY  L++        +++V
Sbjct: 148 MEPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAV 207

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLLD M R+    P++ TYNV+V   C E  + +A   +  + + G +P+ V+YN +   
Sbjct: 208 KLLDEM-RDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKG 266

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                  + AE+++ EM   G  PN  T  ++IS  C+ G ++ A+     + +YG  PN
Sbjct: 267 LCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPN 326

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +N ++  F +    D     + LM      PD+++Y+T++ A    G +D   E+  
Sbjct: 327 SLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLH 386

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +   G  P   +Y+ +  G  +  + E+A ELL  M+  G  P+++ ++TI SG C +G
Sbjct: 387 QLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREG 446

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ AI+ F K+ + G+ PN   +  ++ G  + R    A ++   M + G  P +ST+ 
Sbjct: 447 RIEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYT 506

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
           +L E     GL KEA+ +++++ ++
Sbjct: 507 ILIEGLAYEGLVKEAREMMAELCSR 531



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 192/375 (51%), Gaps = 9/375 (2%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           A+I     SG   EA       +     P   +YN ++ GY + G+ + + +L+  M  E
Sbjct: 95  ALIKKLCASGRTAEARRVLASCE-----PDVMSYNAMVAGYCVTGQLDNARRLVAAMPME 149

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
               P+  TYN L+R  C       A  V+  M   G  PDVVTY  +  A  +     Q
Sbjct: 150 ----PDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQ 205

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A +++ EM   G  P+  T  ++++G C+EG++ +A+ F +++  YG  PN V +N+++K
Sbjct: 206 AVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLK 265

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           G       +  ++++A M      P+V+T++ +++     G ++   EI D + K G  P
Sbjct: 266 GLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTP 325

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           ++ +Y+ +   + ++++ ++A   +  M+ SG +P++V + T+++  C  G +D A+E+ 
Sbjct: 326 NSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELL 385

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            ++ + G +P L ++ T++ G ++A +   A E+L  M   G+ P   T+  ++      
Sbjct: 386 HQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCRE 445

Query: 507 GLTKEAKRILSKIKN 521
           G  +EA +   K+++
Sbjct: 446 GRIEEAIKAFCKVQD 460



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/386 (25%), Positives = 196/386 (50%), Gaps = 1/386 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           +P   TY TL+  L  + R ++  +++  +   G  PD + +  ++ A  +    ++A+ 
Sbjct: 149 EPDTYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVK 208

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              +M++ G  P   TYN ++ G    G+ +++++ L  +   G  +PN  +YN++++  
Sbjct: 209 LLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYG-CEPNTVSYNIVLKGL 267

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C  +   +A  +M +M+  G  P+VVT+N + +   + G  + A E++ ++   G  PN 
Sbjct: 268 CTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNS 327

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            +   I+  +CK+ K+  A+ F   M   G +P++V +N L+       + D   E+L  
Sbjct: 328 LSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 387

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           +K+    P +I+Y+T+++  + AG  ++  E+ ++M   G++PD   YS ++ G  RE  
Sbjct: 388 LKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGR 447

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            E+A +    + + G  PN V++  I+ G C   +   AI++F  M  +G  PN  T+  
Sbjct: 448 IEEAIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTI 507

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGV 489
           L+ G +       A E++  + + GV
Sbjct: 508 LIEGLAYEGLVKEAREMMAELCSRGV 533



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 173/383 (45%), Gaps = 36/383 (9%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+ +  +R   ++A  + + + + G  P +VTY  ++  +  + R +     + 
Sbjct: 187 VVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLK 246

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G +P+++ +N V+     +   E+A     +M   G  P   T+N LI      G
Sbjct: 247 SLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRG 306

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E ++++LD + + G   PN  +YN ++ A+C +K +  A   +  M +SG  PD+V+Y
Sbjct: 307 LVEPAMEILDQIPKYG-CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSY 365

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+ TA  + GE D A E++ +++  G  P   +   +I G  K GK +EAL     M  
Sbjct: 366 NTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTEEALELLNEMVT 425

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P                                   D+ITYSTI +     G +++
Sbjct: 426 KGLQP-----------------------------------DIITYSTISSGLCREGRIEE 450

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             + F  +   GI+P+   Y+ +  G  + +    A +L   M+ +G  PN   +T +I 
Sbjct: 451 AIKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIE 510

Query: 432 GWCSDGSMDRAIEVFDKMCEHGV 454
           G   +G +  A E+  ++C  GV
Sbjct: 511 GLAYEGLVKEAREMMAELCSRGV 533



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 131/262 (50%), Gaps = 5/262 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L  RG  + A  I + + + G  P+ ++Y  +L A   QK+ +   + + 
Sbjct: 292 VVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 351

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G  PD + +N ++ A    G ++ A++   ++K+ G TP   +YNT+I G   AG
Sbjct: 352 LMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 411

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K EE+++LL+ M  +G ++P++ TY+ +    C E  I EA     K+   G++P+ V Y
Sbjct: 412 KTEEALELLNEMVTKG-LQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMGIRPNTVLY 470

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N I     +      A ++   M  NG  PN  T  I+I G   EG +KEA      +  
Sbjct: 471 NAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAREMMAELCS 530

Query: 312 YGVHPNLVIFNLLIKGFVEIMD 333
            GV    V   L+ KG + ++D
Sbjct: 531 RGV----VSKTLVNKGAIRLLD 548



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/231 (21%), Positives = 109/231 (47%), Gaps = 11/231 (4%)

Query: 295 KEGKIKEALRFARTMKEYGVHPNLV-IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           + G ++EA+R   +M   G+ P+       LIK             VLA        PDV
Sbjct: 68  RRGDLEEAIRLVESMA--GLEPSAAGPCAALIKKLCASGRTAEARRVLA-----SCEPDV 120

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           ++Y+ ++  +   G +D  + +   M    ++PD + Y+ L +G       + A  +L  
Sbjct: 121 MSYNAMVAGYCVTGQLDNARRLVAAMP---MEPDTYTYNTLIRGLCGRGRTDNALAVLDD 177

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M+  G  P+VV +T ++   C      +A+++ D+M + G +P++ T+  ++ G  +  +
Sbjct: 178 MLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDIVTYNVVVNGICQEGR 237

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
              A E L+ + ++G  P   ++ ++ +        ++A+++++++  K R
Sbjct: 238 VDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSRKGR 288


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 248/486 (51%), Gaps = 35/486 (7%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++ + + +G   EA  +   +I  G   +LV  T+L+     Q   +S  ++ +++
Sbjct: 292 TFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQGNLDSALNLFNKI 351

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY------ 187
            E+G+ P+ + ++ +I     SGN+E+A + + +MK +G+ P+    N+L++GY      
Sbjct: 352 TEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFNVNSLLRGYLKAPLW 411

Query: 188 -------------GIA---------------GKPEESVKLLDLMSREGNVKPNLRTYNVL 219
                        G+A               GK +E+  LLD M  +G V PN+ +YN +
Sbjct: 412 EEASKLFDEAVDCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMV-PNVVSYNDM 470

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +   C + N+  A +V   M A  +KP+VVTY+ +     + G++++A ++  +M    +
Sbjct: 471 ILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNI 530

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            P   T   II+G CK G++ EA    +   E G  P+ + +N ++ GF++  + D    
Sbjct: 531 APTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALA 590

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           V   M EF V+P+V+TY++++N +  +  +D   +  D+M + G++ D  AYS L  G+ 
Sbjct: 591 VYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFC 650

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           + ++ E A++L   ++E G  PN +++ ++ISG+    +M+ A+  + KM    +  +L 
Sbjct: 651 KRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLG 710

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+ TL+ G  +  +   A ++   M + G+ P   TF +L       G  + A++IL ++
Sbjct: 711 TYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEM 770

Query: 520 KNKERT 525
             K  T
Sbjct: 771 DRKNMT 776



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 202/403 (50%), Gaps = 5/403 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV  M +   + ++ G+ +EA+  F    E G K     Y+ ++ A+  +   N    ++
Sbjct: 222 TVHVMVR---ACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLELL 278

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++E G  P    F +VI A    GNM EA+    +M   G         +L+KGY   
Sbjct: 279 EEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYCAQ 338

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  + ++ L + ++ +G + PN  TY+VL+   CN  NI +A  +  +M  +G+ P V  
Sbjct: 339 GNLDSALNLFNKITEDG-LFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVFN 397

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            N++   Y +    ++A ++  E    GV  N  T  I++S  CK GK+ EA      M 
Sbjct: 398 VNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKMDEACSLLDNMV 456

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ PN+V +N +I G     + D    V + M    + P+V+TYS +++     G  +
Sbjct: 457 NQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSE 516

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K  ++FD M    I P    ++ +  G  +  +  +A + L   +E GF P+ + + +I+
Sbjct: 517 KALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIV 576

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
            G+  +G++D A+ V+ +MCE GVSPN+ T+ +L+ G+ ++ +
Sbjct: 577 DGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNR 619



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 205/433 (47%), Gaps = 2/433 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V ++  L+   ++    +EA  +F+  ++ G   ++ TY  +++ L    + +   S++
Sbjct: 394 SVFNVNSLLRGYLKAPLWEEASKLFDEAVDCG-VANIFTYNIMMSWLCKGGKMDEACSLL 452

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   GM P+ + +N +I      GNM+ A   F  M    L P   TY+ LI G    
Sbjct: 453 DNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKK 512

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E+++ L D M    N+ P   T+N ++   C    ++EA + +      G  P  +T
Sbjct: 513 GDSEKALDLFDQM-LSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMT 571

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN+I   + + G  D A  V  EM   GV PN  T   +I+G+CK  +I  AL+    M+
Sbjct: 572 YNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMR 631

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G+  ++  ++ LI GF +  D +   ++   + E  ++P+ I Y+++++ +     M+
Sbjct: 632 EKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNME 691

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                +  M    I  D   Y+ L  G ++E     A +L M M+  G  P+++ F  ++
Sbjct: 692 AALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLV 751

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G C+ G ++ A ++ ++M    ++P++  + TL+ GY        A  +   M   G+ 
Sbjct: 752 NGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLV 811

Query: 491 PQKSTFLLLAEAR 503
           P   T+ +L   +
Sbjct: 812 PDDVTYDILINGK 824



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/430 (23%), Positives = 183/430 (42%), Gaps = 17/430 (3%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
            A+ + N  + G   PS V +   L  +   KRF+              + D   FN ++
Sbjct: 113 HARKLLNRYVSGDSDPSPVVFVDHL--INCAKRFD-------------FELDHRVFNYLL 157

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           NA+  +  +E A+D F  M    + P     N L+          E   L + M   G +
Sbjct: 158 NAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMVLRG-I 216

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
             +  T +V+VRA   E  + EA     +    G+K D   Y+ I  A  +   ++   E
Sbjct: 217 YGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSNLGLE 276

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           ++ EM+  G  P+  T   +I     +G + EALR    M   G   NLV+   L+KG+ 
Sbjct: 277 LLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLMKGYC 336

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
              + D    +   + E  + P+ +TYS ++     +G ++K  E++  M   GI P   
Sbjct: 337 AQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQMKLNGIPPSVF 396

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
             + L +GY++    E+A +L    ++ G   N+  +  ++S  C  G MD A  + D M
Sbjct: 397 NVNSLLRGYLKAPLWEEASKLFDEAVDCGV-ANIFTYNIMMSWLCKGGKMDEACSLLDNM 455

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G+ PN+ ++  ++ G+        A  +   M A  + P   T+ +L +     G +
Sbjct: 456 VNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDS 515

Query: 510 KEAKRILSKI 519
           ++A  +  ++
Sbjct: 516 EKALDLFDQM 525



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/259 (25%), Positives = 120/259 (46%), Gaps = 37/259 (14%)

Query: 68  SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           SC T  S   +++  I+ G    A A++  + E G  P++VTYT+L+       R +   
Sbjct: 568 SCMTYNS---IVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLAL 624

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
               ++ E G++ D   ++A+I+ F +  +ME A D F+++ E GL+P    YN++I G+
Sbjct: 625 KTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGF 684

Query: 188 GIAGKPEESV-------------------KLLDLMSREG---------------NVKPNL 213
                 E ++                    L+D + +EG                + P++
Sbjct: 685 RDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDI 744

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            T++VLV   CN+  +  A  ++ +M    M P V+ YNT+   Y + G   +A  +  E
Sbjct: 745 ITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDE 804

Query: 274 MEHNGVQPNGRTCGIIISG 292
           M   G+ P+  T  I+I+G
Sbjct: 805 MLDRGLVPDDVTYDILING 823


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 213/401 (53%), Gaps = 9/401 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEG-GHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           TV +   ++N L + GK ++A+  F   +EG G KP++V+Y T++   + +        I
Sbjct: 248 TVYTFNIMVNVLCKEGKLKKARE-FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRI 306

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           +  +   G++PDS  + ++I+   + G +EEA   F KM E GL P   TYNTLI GY  
Sbjct: 307 LDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCN 366

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G  E +    D M ++G + P++ TYN+LV A   E  + EA +++ +M   G+ PD +
Sbjct: 367 KGDLERAFSYRDEMVKKG-IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 425

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN +   Y++ G A +A ++  EM   G++P   T   +I    +  ++KEA      +
Sbjct: 426 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 485

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTA 366
            + GV P++++FN ++ G         V+    L+KE     V PD +T++T+M      
Sbjct: 486 LDQGVSPDVIMFNAMVDGHCA---NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 542

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G +++ + + D+M + GIKPD  +Y+ L  GY R  + + A  +   M+  GF+P ++ +
Sbjct: 543 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 602

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +I   C +   D A E+  +M   G+SP+  T+ +L+ G
Sbjct: 603 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 643



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 196/397 (49%), Gaps = 1/397 (0%)

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
           ++ T+  ++  L  + +       +  +E  G  P+ + +N +I+ +S  GN+E A    
Sbjct: 248 TVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRIL 307

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
             M+  G+ P + TY +LI G    G+ EE+  L D M   G V PN  TYN L+  +CN
Sbjct: 308 DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV-PNAVTYNTLIDGYCN 366

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
           + ++  A++   +M   G+ P V TYN +  A    G   +A+++I EM   G+ P+  T
Sbjct: 367 KGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAIT 426

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
             I+I+GY + G  K+A      M   G+ P  V +  LI            D++   + 
Sbjct: 427 YNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL 486

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           +  V+PDVI ++ +++     G +++   +  +M +  + PD   ++ L +G  RE + E
Sbjct: 487 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 546

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +A  LL  M   G  P+ + + T+ISG+   G +  A  V D+M   G +P L T+  L+
Sbjct: 547 EARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 606

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
               + ++   AEE+L+ M   G+ P  ST+L L E 
Sbjct: 607 KCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 643



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 190/381 (49%), Gaps = 1/381 (0%)

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           SI F+ ++    E    +EA   F+ MKE G+ P   T N ++  +    + E +  L  
Sbjct: 179 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 238

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M R   +   + T+N++V   C E  + +A   +  M   G KP+VV+YNTI   Y+  
Sbjct: 239 EMFRL-RISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 297

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           G  + A  ++  M   G++P+  T G +ISG CKEG+++EA      M E G+ PN V +
Sbjct: 298 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 357

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N LI G+    D +        M +  + P V TY+ +++A    G M +  ++  +M K
Sbjct: 358 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 417

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            GI PDA  Y+IL  GY R    +KA +L   M+  G  P  V +T++I        M  
Sbjct: 418 KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 477

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A ++F+K+ + GVSP++  F  ++ G+       RA  +L+ M    V P + TF  L +
Sbjct: 478 ADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQ 537

Query: 502 ARRATGLTKEAKRILSKIKNK 522
            R   G  +EA+ +L ++K +
Sbjct: 538 GRCREGKVEEARMLLDEMKRR 558



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 55/115 (47%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   LM      GK +EA+ + + +   G KP  ++Y TL++    +        +  ++
Sbjct: 531 TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 590

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
              G +P  + +NA+I    ++   + A +   +M   G++P  STY +LI+G G
Sbjct: 591 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 645


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/422 (28%), Positives = 206/422 (48%), Gaps = 1/422 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A  +F    E G   +  +Y  +  +L    R    H ++ Q+E  G  PD I ++ VIN
Sbjct: 237 ALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVIN 296

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            + + G ++  +    +M+  GL P   TYN +I      GK  E+ ++L  M  EG + 
Sbjct: 297 GYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG-IA 355

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P+   Y  L+  +C   N++ A+ +  +M    + PD +TY  +     Q G   +A+++
Sbjct: 356 PDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKL 415

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             EM    ++P+  T   +I GYCKEGK+KEA      M + G+ PN+V +  L  G  +
Sbjct: 416 FHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCK 475

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
             + D  +E+L  M    +  ++ TY++++N    AG +D+  ++  DM  AG  PDA  
Sbjct: 476 CGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVT 535

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ L   Y + +E  +A ELL  M++    P VV F  +++G+C  G ++   ++   M 
Sbjct: 536 YTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWML 595

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E G+ PN  T+ +L+  Y          EI + M A GV P  +T+ +L +        K
Sbjct: 596 EKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMK 655

Query: 511 EA 512
           EA
Sbjct: 656 EA 657



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 201/407 (49%), Gaps = 20/407 (4%)

Query: 126 IHSIMSQVEENGMDPD--SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +  ++   ++ G DP    IFF  ++    E+G ++EA   F KM   GL  +  + N  
Sbjct: 168 VEQLIYTYKDWGSDPRVFDIFFQVLV----EAGMLDEARKLFDKMLNYGLLISVDSCNLF 223

Query: 184 IK-------GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
           I        G  IA K             E  V  N  +YN++  + C    + EA  ++
Sbjct: 224 ISHLSEDLDGIKIALKVFVEFP-------EVGVCWNTASYNIITHSLCQLGRVVEAHQLL 276

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
            +M   G  PDV++Y+T+   Y Q GE  +  ++I EM+  G++PN  T   +I   CK 
Sbjct: 277 LQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKT 336

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
           GK+ EA R  R M   G+ P+ VI+  LI GF ++ +      +   M++ +++PD ITY
Sbjct: 337 GKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITY 396

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           + ++      G + +  ++F +M    ++PD   Y+ L  GY +E + ++A  L   M++
Sbjct: 397 TAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQ 456

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G  PN+V +T +  G C  G +D A E+  +MC  G+  N+ T+ +L+ G  +A    +
Sbjct: 457 MGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQ 516

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           A ++++ M+  G HP   T+  L +A   +     A  +L ++ ++E
Sbjct: 517 AVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRE 563



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 210/436 (48%), Gaps = 1/436 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + ++N   + G+ Q    +   +   G KP+  TY  ++  L    +      ++ 
Sbjct: 288 VISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLR 347

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD + +  +I+ F + GN+  A   F +M++  ++P   TY  +I G    G
Sbjct: 348 EMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTG 407

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ KL   M  +  ++P+  TY  L+  +C E  + EA+++ ++M   G+ P++VTY
Sbjct: 408 RVMEADKLFHEMVCK-RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTY 466

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +A    + GE D A E++ EM   G++ N  T   +++G CK G I +A++  + M+ 
Sbjct: 467 TALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEV 526

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G HP+ V +  L+  + +  +     E+L  M +  + P V+T++ +MN +  +G ++ 
Sbjct: 527 AGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLED 586

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +++   M + GI P+A  Y+ L K Y          E+   M   G  P+   +  +I 
Sbjct: 587 GEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIK 646

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C   +M  A  +   M   G +  + ++  L+ G+ + ++   A E+ + M+  G+  
Sbjct: 647 GHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVA 706

Query: 492 QKSTFLLLAEARRATG 507
            +  + + A+     G
Sbjct: 707 DREIYNIFADINYDEG 722



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 186/372 (50%), Gaps = 2/372 (0%)

Query: 146 NAVINAFSES-GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           N  I+  SE    ++ A+  F +  E G+   T++YN +       G+  E+ +LL  M 
Sbjct: 221 NLFISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQME 280

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
             G + P++ +Y+ ++  +C    +     ++ +M   G+KP+  TYN +     + G+ 
Sbjct: 281 LRGCI-PDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKV 339

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +AE V+ EM   G+ P+G     +I G+CK G +  A R    M++  + P+ + +  +
Sbjct: 340 AEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAV 399

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G  +       D++   M   R+ PD +TY+ +++ +   G M +   + + M + G+
Sbjct: 400 ICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGL 459

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+   Y+ LA G  +  E + A ELL  M   G   N+  + ++++G C  G++D+A++
Sbjct: 460 TPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVK 519

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           +   M   G  P+  T+ TLM  Y ++R+  RA E+L+ M    + P   TF +L     
Sbjct: 520 LMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFC 579

Query: 505 ATGLTKEAKRIL 516
            +G+ ++ +++L
Sbjct: 580 MSGMLEDGEKLL 591



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 184/388 (47%), Gaps = 1/388 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++   + G    A  +F+ + +    P  +TYT ++  L    R      +  ++  
Sbjct: 362 TTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVC 421

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             ++PD + + A+I+ + + G M+EA     +M + GLTP   TY  L  G    G+ + 
Sbjct: 422 KRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDT 481

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +LL  M R+G ++ N+ TYN LV   C   NI +A  +M  M  +G  PD VTY T+ 
Sbjct: 482 ANELLHEMCRKG-LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 540

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            AY ++ E  +A E++ +M    +QP   T  ++++G+C  G +++  +  + M E G+ 
Sbjct: 541 DAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIM 600

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN   +N LIK +    +     E+   M    V PD  TY+ ++     A  M +   +
Sbjct: 601 PNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFL 660

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
             DM   G      +Y+ L KG+ + ++  +A EL   M   G   +  I+         
Sbjct: 661 HRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYD 720

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFET 463
           +G M+  +E+ D+  E  +  +++T  T
Sbjct: 721 EGKMELTLELCDEAIEKCLVGDIQTKNT 748



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 1/190 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++E   TV +   LMN     G  ++ + +   ++E G  P+  TY +L+    I+   
Sbjct: 560 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 619

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            +   I   +   G+ PD   +N +I    ++ NM+EA      M   G   T S+YN L
Sbjct: 620 RATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNAL 679

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           IKG+    K  E+ +L + M REG V  +   YN+      +E  +     +  +     
Sbjct: 680 IKGFYKRKKFLEARELFEQMRREGLV-ADREIYNIFADINYDEGKMELTLELCDEAIEKC 738

Query: 244 MKPDVVTYNT 253
           +  D+ T NT
Sbjct: 739 LVGDIQTKNT 748


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 221/448 (49%), Gaps = 8/448 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L   GK  +A  +F+ +I  G +P++VTY TL+  L      N+   ++  +
Sbjct: 141 TFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSM 200

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+    PD + + ++I++  +   + EA + F KM   G++P   TY +LI       + 
Sbjct: 201 EQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEW 260

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +    LL+ M     + P++  ++ +V A C E  ITEA +V+  M   G++P+VVTYN 
Sbjct: 261 KHVTTLLNQMI-NSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNA 319

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +    E D+A +V   M HNG  PN  +   +I+GYCK  ++ +A      M +  
Sbjct: 320 LMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKE 379

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMD 370
           + PN V +N L+           + + +AL  E   +   PD+ TY  +++       +D
Sbjct: 380 LIPNTVTYNTLM----HXCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLD 435

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +   +  + + PD   Y+I+  G  R  E E A ++   +   G  PNV  +T +I
Sbjct: 436 EAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMI 495

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G C  G +D A ++F +M  +G SP+  T+ T+  G  + ++  RA ++LQ M A G  
Sbjct: 496 NGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFS 555

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSK 518
              ST  LL E      L +  K+ILS+
Sbjct: 556 ADVSTTTLLVEMLCDDKLDQSVKQILSE 583



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 205/461 (44%), Gaps = 53/461 (11%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A + FN ++     PS V +  LL ++   K++ ++ S+ +Q++  G+ PD    N +I
Sbjct: 52  DALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILI 111

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N+F     +  A     K+ + G  P T+T+ T                           
Sbjct: 112 NSFCHLNRLGFAFSVLAKILKLGHQPDTATFTT--------------------------- 144

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
                    L+R  C E  I +A ++  KM   G +P+VVTY T+     + G  + A  
Sbjct: 145 ---------LIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIR 195

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           ++  ME    QP+      II   CK+ ++ EA      M   G+ P++  +  LI    
Sbjct: 196 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLC 255

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
            + +   V  +L  M   ++ PDV+ +ST+++A    G + +  ++ D M   G++P+  
Sbjct: 256 NLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVV 315

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+ L  G+  + E ++A ++  TM+ +G+ PNV+ + T+I+G+C    MD+A  +F++M
Sbjct: 316 TYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEM 375

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
           C+  + PN  T+ TLM      R    A  +   M A G  P  +T+ +L +        
Sbjct: 376 CQKELIPNTVTYNTLMHXCHVGRL-QDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHL 434

Query: 510 KEAKRILSKIKNKE----------------RTNEMEAEEDI 534
            EA  +L  I+                   R  E+EA  DI
Sbjct: 435 DEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 475



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 70/259 (27%), Positives = 133/259 (51%), Gaps = 2/259 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V   + ++++L + GK  EA  + + +I  G +P++VTY  L+    +Q   +    +  
Sbjct: 279 VVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFD 338

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  NG  P+ I +N +IN + +   M++A   F +M +  L P T TYNTL+    + G
Sbjct: 339 TMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHXCHV-G 397

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + ++++ L   M   G + P+L TY +L+   C + ++ EA  ++  +  S M PD+  Y
Sbjct: 398 RLQDAIALFHEMVAHGQI-PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 456

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     + GE + A ++   +   G++PN RT  I+I+G C+ G + EA +    M  
Sbjct: 457 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDG 516

Query: 312 YGVHPNLVIFNLLIKGFVE 330
            G  P+   +N + +G ++
Sbjct: 517 NGCSPDGCTYNTITQGLLQ 535



 Score = 47.0 bits (110), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 29/127 (22%), Positives = 61/127 (48%), Gaps = 1/127 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           ++  T +++ +   G+ + A+ IF+NL   G +P++ TYT ++  L  +   +  + +  
Sbjct: 453 IQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFM 512

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++ NG  PD   +N +     ++     A+    +M   G +   ST  TL+       
Sbjct: 513 EMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARGFSADVST-TTLLVEMLCDD 571

Query: 192 KPEESVK 198
           K ++SVK
Sbjct: 572 KLDQSVK 578


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 239/506 (47%), Gaps = 41/506 (8%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A A+F  +I     PSLV ++   +A+   K+FN +     Q+E NG+  +    N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN F        A     K+ + G  P T+T+NTLIKG  + GK  E+V L+D M   
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +P++ TYN +V   C   + + A +++ KM    +K DV TY+TI  +  ++G  D 
Sbjct: 188 G-CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246

Query: 267 AEEVIVEMEHNGVQ-----------------------------------PNGRTCGIIIS 291
           A  +  EME  G++                                   PN  T  +++ 
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
            + KEGK++EA    + M   G+ PN++ +N L+ G+         + +L LM   + +P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           D++T+++++  +     +D   ++F ++ K G+  +A  YSIL +G+ +  + + AEEL 
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M+  G  P+V+ +  ++ G C +G +++A+E+F+ + +  +   +  + T++ G  + 
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAE 531
            +   A  +   +   GV P   T+ ++       G   EA  +L K++      +  A 
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME-----EDGNAP 541

Query: 532 EDIPVESLERLYHKEATTASYPNLLQ 557
            D    +L R + ++    +   L++
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIE 567



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 224/441 (50%), Gaps = 3/441 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L   GK  EA  + + ++E G +P +VTY +++  +      +    ++ ++EE  
Sbjct: 164 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   ++ +I++    G ++ A+  F +M+  G+  +  TYN+L++G   AGK  +  
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283

Query: 198 KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            LL D++SRE  + PN+ T+NVL+  +  E  + EA  +  +M   G+ P+++TYNT+  
Sbjct: 284 LLLKDMVSRE--IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y       +A  ++  M  N   P+  T   +I GYC   ++ + ++  R + + G+  
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N V +++L++GF +       +E+   M    V PDV+TY  +++     G ++K  EIF
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           +D+ K+ +      Y+ + +G  +  + E A  L  ++   G  PNV+ +T +ISG C  
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           GS+  A  +  KM E G +PN  T+ TL+  +        + ++++ MK+ G     S+ 
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 581

Query: 497 LLLAEARRATGLTKEAKRILS 517
            ++ +   +  L K    +LS
Sbjct: 582 KMVIDMLLSGELDKSFLDMLS 602



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 70/129 (54%), Gaps = 3/129 (2%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T ++  + + GK ++A  +F +L   G KP+++TYT +++ L  +   +  + ++ ++EE
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +G  P+   +N +I A    G++  +     +MK  G +   S+   +I    ++G+ ++
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML-LSGELDK 595

Query: 196 SVKLLDLMS 204
           S   LD++S
Sbjct: 596 S--FLDMLS 602


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/484 (25%), Positives = 226/484 (46%), Gaps = 41/484 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L +  + ++A      ++  G  P + TYT ++ AL ++ R +     + ++
Sbjct: 13  TYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLEEM 72

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
               + P+ + +  +I+   + G ++EA+    KM++  + PT  TYN+LI G   A + 
Sbjct: 73  ANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISGLCKAERA 131

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+  LL+ M   G + P++ TY  L+  +C  K   +A  V  ++ A G +PDVVTY+ 
Sbjct: 132 SEAYDLLEEMVYSGCI-PDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSC 190

Query: 254 IATAYAQNGEADQAEEVIVEMEHNG-VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           +     + G   +A ++   M  +G   PN  T   +ISG+C+ GK+ EA+     M E 
Sbjct: 191 LIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAET 250

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G  P++V +  L+ GF ++   D   ++L  M    + PDV+T++++M+       +   
Sbjct: 251 GSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDA 310

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL--------------------- 411
             I  +M +    P  + Y+ +  GY R  + E+A + +                     
Sbjct: 311 VHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVVSFNIMIRGLC 370

Query: 412 --------MTMIESG----FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH-GVSPNL 458
                   M ++E       +P+VV++TT+I G C +  +D A  V+ KM E  G  PN 
Sbjct: 371 KVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNS 430

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+ TL+ G   A    RA   ++     G  P   T+ LL +A R     ++A+ +L  
Sbjct: 431 ITYSTLVTGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELLDD 486

Query: 519 IKNK 522
           +  +
Sbjct: 487 MVQR 490



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 196/414 (47%), Gaps = 5/414 (1%)

Query: 107 LVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW 166
            VTYT+L+  L   KR       + ++   G  PD   + AVI+A      + EA     
Sbjct: 11  FVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFLE 70

Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
           +M    LTP   TY  LI G    G+ +E+V LL  M ++    P   TYN L+   C  
Sbjct: 71  EMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKK--CVPTAVTYNSLISGLCKA 128

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           +  +EA++++ +M  SG  PD+ TY T+ T + ++ ++D A  V  ++   G +P+  T 
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 287 GIIISGYCKEGKIKEALR-FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
             +I G CKEG++KEA+  F R +K     PN V +N LI GF  +   D    +L  M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           E   +PDV+TY+T+MN +     +D   ++ + M + G+ PD   ++ L  G  RE    
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
            A  +L  M      P V  + TI+ G+C    ++ A +   +  E    PN+ +F  ++
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLE--EMDCPPNVVSFNIMI 366

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            G  +  +   A E+++  +    +P    +  + +         EA R+  K+
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKM 420



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 212/430 (49%), Gaps = 46/430 (10%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M K+   T  +   L++ L +  +  EA  +   ++  G  P + TYTTL+      K+ 
Sbjct: 107 MRKKCVPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKS 166

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNT 182
           +    +  Q+   G  PD + ++ +I+   + G ++EA+D F +M +SG   P T TYN+
Sbjct: 167 DDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNS 226

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+   GK +E++ LL+ M+  G+  P++ TY  L+  +C    + +A++++++M   
Sbjct: 227 LISGFCRMGKMDEAMNLLERMAETGS-SPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRK 285

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ PDVVT+ ++     +      A  ++ EM      P   T   I+ GYC+  +++EA
Sbjct: 286 GLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEA 345

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
            +F   ++E    PN+V FN++I+G  ++       E++   +  R NPDV+ Y+T+++ 
Sbjct: 346 RKF--MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVID- 402

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES-GFHP 421
                                             G  RE++ ++A  +   M+E  G  P
Sbjct: 403 ----------------------------------GLCREKKVDEACRVYRKMLEEPGCLP 428

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           N + ++T+++G C+ G +DRA    +K    G  PN+ T+  L+  + +A +   A E+L
Sbjct: 429 NSITYSTLVTGLCNAGMLDRARGYIEK----GCVPNIGTYNLLIDAFRKANRDEDARELL 484

Query: 482 QIM--KAFGV 489
             M  + FGV
Sbjct: 485 DDMVQRGFGV 494



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 200/431 (46%), Gaps = 6/431 (1%)

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           V  N    D + + ++I    +   +E+A+    KM   G  P   TY  +I    +  +
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             E+ K L+ M+   N+ PN+ TY VL+   C    + EA  ++ KM    + P  VTYN
Sbjct: 62  LHEARKFLEEMANR-NLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYN 119

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++ +   +   A +A +++ EM ++G  P+  T   +I+G+CK  K  +ALR    +   
Sbjct: 120 SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 179

Query: 313 GVHPNLVIFNLLIKGFV-EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           G  P++V ++ LI G   E   ++ +D    ++K     P+ +TY+++++ +   G MD+
Sbjct: 180 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 239

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + + M + G  PD   Y+ L  G+ +    + A +LL  M   G  P+VV FT+++ 
Sbjct: 240 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMD 299

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C +  +  A+ +  +M     SP + T+ T++ GY  A Q   A + +  ++     P
Sbjct: 300 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMDCPP 357

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTAS 551
              +F ++         + EA  ++ + + + R N         ++ L R    +     
Sbjct: 358 NVVSFNIMIRGLCKVNRSSEAMELVEEAR-RRRCNPDVVMYTTVIDGLCREKKVDEACRV 416

Query: 552 YPNLLQIPNVV 562
           Y  +L+ P  +
Sbjct: 417 YRKMLEEPGCL 427


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 220/434 (50%), Gaps = 1/434 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A  +F  +     +P L+ ++ L + +   K+++ +  +  Q+E  G+  +    +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN       +  A     K+ + G  P T T++TLI G  + G+  E+++L+D M   
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G+ KP L T N LV   C    +++A  ++ +M  +G +P+ VTY  +     ++G+   
Sbjct: 172 GH-KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A E++ +ME   ++ +     III G CK+G +  A      M+  G   +++I+  LI+
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GF      D   ++L  M + ++ PDV+ +S +++ +   G + + +E+  +M + GI P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   Y+ L  G+ +E + +KA  +L  M+  G  PN+  F  +I+G+C    +D  +E+F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            KM   GV  +  T+ TL+ G+ E  +   A+E+ Q M +  V P   ++ +L +     
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470

Query: 507 GLTKEAKRILSKIK 520
           G  ++A  I  KI+
Sbjct: 471 GEPEKALEIFEKIE 484



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 218/427 (51%), Gaps = 3/427 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ ++  L+N L   GK  +A  + + ++E G +P+ VTY  +L  +    +      ++
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++EE  +  D++ ++ +I+   + G+++ A + F +M+  G       Y TLI+G+  A
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295

Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           G+ ++  KLL D++ R+  + P++  ++ L+  +  E  + EA  +  +M   G+ PD V
Sbjct: 296 GRWDDGAKLLRDMIKRK--ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY ++   + +  + D+A  ++  M   G  PN RT  I+I+GYCK   I + L   R M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              GV  + V +N LI+GF E+   +   E+   M   RV PD+++Y  +++     G  
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +K  EIF+ + K+ ++ D   Y+I+  G     + + A +L  ++   G  P+V  +  +
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G C  GS+  A  +F KM E G SPN  T+  L+  +       ++ ++++ +K  G 
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593

Query: 490 HPQKSTF 496
               ST 
Sbjct: 594 SVDASTL 600



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 218/447 (48%), Gaps = 1/447 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L+N L   G+  EA  + + ++E GHKP+L+T   L+  L +  + +    ++ ++
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E G  P+ + +  V+    +SG    AM+   KM+E  +      Y+ +I G    G  
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + +  L + M  +G  K ++  Y  L+R +C      +   ++  M    + PDVV ++ 
Sbjct: 264 DNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + + G+  +AEE+  EM   G+ P+  T   +I G+CKE ++ +A      M   G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             PN+  FN+LI G+ +    D   E+   M    V  D +TY+T++  +   G ++  K
Sbjct: 383 CGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAK 442

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+F +M    ++PD  +Y IL  G     EPEKA E+   + +S    ++ I+  II G 
Sbjct: 443 ELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGM 502

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C+   +D A ++F  +   GV P++KT+  ++ G  +      A+ + + M+  G  P  
Sbjct: 503 CNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNG 562

Query: 494 STFLLLAEARRATGLTKEAKRILSKIK 520
            T+ +L  A    G   ++ +++ +IK
Sbjct: 563 CTYNILIRAHLGEGDATKSAKLIEEIK 589



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 202/417 (48%), Gaps = 20/417 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++  ++ GK +EA+ +   +I+ G  P  VTYT+L+     + + +  + ++ 
Sbjct: 317 VVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD 376

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  P+   FN +IN + ++  +++ ++ F KM   G+   T TYNTLI+G+   G
Sbjct: 377 LMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 436

Query: 192 KPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           K E + +L  +++SR   V+P++ +Y +L+   C+     +A  +  K+  S M+ D+  
Sbjct: 437 KLEVAKELFQEMVSRR--VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGI 494

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN I        + D A ++   +   GV+P+ +T  I+I G CK+G + EA    R M+
Sbjct: 495 YNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKME 554

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G  PN   +N+LI+  +   D     +++  +K    + D    ST+  A ST     
Sbjct: 555 EDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDA---STLRFALSTLA--- 608

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE--KAEELLMTMIESGFHPNVVIFTT 428
                   M KAG +PD   ++ L + +  E+      A  L   M   G+ PNVV + T
Sbjct: 609 -------RMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNT 661

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +I G  +   + +   V D+M E G  PN  T  T + G    +Q      IL + K
Sbjct: 662 VIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGL--CKQDLHGSAILLLRK 716



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/346 (21%), Positives = 155/346 (44%), Gaps = 18/346 (5%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +R+   L+N   +     +   +F  +   G     VTY TL+       +      +  
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++    + PD + +  +++   ++G  E+A++ F K+++S +      YN +I G   A 
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +++  L   +  +G VKP+++TYN+++   C + +++EA  +  KM   G  P+  TY
Sbjct: 507 KVDDAWDLFCSLPLKG-VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTY 565

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  A+   G+A ++ ++I E++  G   +  T             ++ AL     M +
Sbjct: 566 NILIRAHLGEGDATKSAKLIEEIKRCGFSVDAST-------------LRFALSTLARMLK 612

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV---NPDVITYSTIMNAWSTAGF 368
            G  P++  F  L++ F  + +   V +   L K  +     P+V+TY+T++        
Sbjct: 613 AGHEPDVFTFTTLLRPFC-LEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNM 671

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           + +   + D M + G +P+A   S    G  ++     A  LL  M
Sbjct: 672 ISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKM 717



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 116/256 (45%), Gaps = 23/256 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + G+P++A  IF  + +   +  +  Y  ++  +    + +    +   +   G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N +I    + G++ EA   F KM+E G +P   TYN LI+ +   G   +S 
Sbjct: 523 VKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSA 582

Query: 198 KLLDLMSREG---------------------NVKPNLRTYNVLVRAWCNEKN--ITEAWN 234
           KL++ + R G                       +P++ T+  L+R +C E+N  + +A  
Sbjct: 583 KLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPT 642

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           +   M A G KP+VVTYNT+           Q   V+ +M   G QPN  T    ISG C
Sbjct: 643 LFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLC 702

Query: 295 KEGKIKEALRFARTMK 310
           K+     A+   R M+
Sbjct: 703 KQDLHGSAILLLRKME 718



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/211 (21%), Positives = 95/211 (45%), Gaps = 22/211 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++   ++  L ++G   EA  +F  + E GH P+  TY  L+ A   +        ++ 
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIE 586

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++  G   D+               +  A+ T  +M ++G  P   T+ TL++ + +  
Sbjct: 587 EIKRCGFSVDA-------------STLRFALSTLARMLKAGHEPDVFTFTTLLRPFCL-- 631

Query: 192 KPEESVKLLDLMSREGNVK-----PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
             EE+  + D  +   N+K     PN+ TYN +++   N   I++   V+ +M   G +P
Sbjct: 632 --EENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQP 689

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           + VT +T  +   +      A  ++ +ME++
Sbjct: 690 NAVTKSTFISGLCKQDLHGSAILLLRKMEND 720


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/446 (29%), Positives = 218/446 (48%), Gaps = 20/446 (4%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T  ++ L+    P  A  +F ++       S  T+  +L  L    +      ++ Q+  
Sbjct: 85  TASLHPLLSSLPPAPAFVLFADIFRLRLPLSTTTFNIMLRHLCTAGKPVRALELLRQMPS 144

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPE 194
               P+++ +N VI  F   G ++  ++   +M+E  G+ P   TY T+I G+   GK E
Sbjct: 145 ----PNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVE 200

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++ K+ D M  EG V+PN   YN L+  +C++ N+  A     +M   G+   V TYN  
Sbjct: 201 DATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLF 260

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                  G A +A  ++ EM   G+ P+  T  I+I+GYCKEGK K+A++    M   G+
Sbjct: 261 VHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGI 320

Query: 315 HPNLVIFNLLI-----KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              +V +  LI     KG V+  DR   D V        + PD+  Y+ ++N+  T G M
Sbjct: 321 RATVVTYTSLIHALSMKGMVQETDRLFNDAV-----RRGIRPDLFMYNALINSHCTGGDM 375

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D+  EI  +M K  I PD   Y+ L +G       ++A  L+  M + G  P++V + T+
Sbjct: 376 DRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTL 435

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           ISG+   G +  A++V D+M   G +P L T+  ++ G     Q   AE++++ M   G+
Sbjct: 436 ISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGI 495

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRI 515
            P  ST++ L E     GLT E +R+
Sbjct: 496 TPDDSTYISLIE-----GLTTEDERL 516



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/353 (26%), Positives = 170/353 (48%), Gaps = 15/353 (4%)

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
           +T+T+N +++    AGKP  +++LL  M       PN  TYN ++  +C    +     +
Sbjct: 115 STTTFNIMLRHLCTAGKPVRALELLRQMP-----SPNAVTYNTVIAGFCARGRVQAGIEI 169

Query: 236 MHKMAA-SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG-VQPNGRTCGIIISGY 293
           M +M    G+ PD  TY T+ + + + G+ + A +V  EM   G V+PN      +I GY
Sbjct: 170 MREMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGY 229

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---V 349
           C +G ++ ALR+   M + GV   +  +NL    FV  +  +G   E  AL++E     +
Sbjct: 230 CDQGNLEVALRYRGEMVDRGVSMTVATYNL----FVHTLFMEGRAAEAHALVEEMGEKGL 285

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            PD  TY+ ++N +   G   K  ++F+ M   GI+     Y+ L      +   ++ + 
Sbjct: 286 APDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDR 345

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L    +  G  P++ ++  +I+  C+ G MDRA E+  +M +  ++P+  T+ TLM G  
Sbjct: 346 LFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLC 405

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              +   A  +++ M   G+ P   ++  L       G  K+A ++  ++  K
Sbjct: 406 LLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGK 458



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 152/314 (48%), Gaps = 21/314 (6%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEG--------------------GHKPSLVTYT 111
           V   TK+ + ++  GK +    ++N LI G                    G   ++ TY 
Sbjct: 199 VEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYN 258

Query: 112 TLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES 171
             +  L ++ R    H+++ ++ E G+ PD+  +N +IN + + G  ++AM  F  M   
Sbjct: 259 LFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGK 318

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE 231
           G+  T  TY +LI    + G  +E+ +L +   R G ++P+L  YN L+ + C   ++  
Sbjct: 319 GIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRRG-IRPDLFMYNALINSHCTGGDMDR 377

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           A+ +M +M    + PD VTYNT+       G  D+A  +I EM   G+QP+  +   +IS
Sbjct: 378 AFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLIS 437

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
           GY  +G IK+A++    M   G +P L+ +N +IKG          ++++  M    + P
Sbjct: 438 GYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITP 497

Query: 352 DVITYSTIMNAWST 365
           D  TY +++   +T
Sbjct: 498 DDSTYISLIEGLTT 511



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 97/184 (52%), Gaps = 1/184 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV + T L+++L  +G  QE   +FN+ +  G +P L  Y  L+ +       +    IM
Sbjct: 323 TVVTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIM 382

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++E+  + PD + +N ++      G ++EA     +M + G+ P   +YNTLI GY + 
Sbjct: 383 GEMEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMK 442

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +++VK+ D M  +G   P L TYN +++  C      +A +++ +M  +G+ PD  T
Sbjct: 443 GDIKDAVKVRDEMMGKG-FNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDST 501

Query: 251 YNTI 254
           Y ++
Sbjct: 502 YISL 505



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/294 (19%), Positives = 127/294 (43%), Gaps = 11/294 (3%)

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           T+N +       G+  +A E++ +M      PN  T   +I+G+C  G+++  +   R M
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAGIEIMREM 173

Query: 310 KEYG-VHPNLVIFNLLIKGFVEIMDRDGVDEVL-ALMKEFRVNPDVITYSTIMNAWSTAG 367
           +E G + P+   +  +I G+ ++   +   +V   ++ E +V P+ + Y+ ++  +   G
Sbjct: 174 RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQG 233

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            ++       +M   G+      Y++       E    +A  L+  M E G  P+   + 
Sbjct: 234 NLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYN 293

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +I+G+C +G   +A+++F+ M   G+   + T+ +L+   S        + +       
Sbjct: 294 ILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRR 353

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLER 541
           G+ P    +  L  +    G    A  I+ +++ K  T      +D+   +L R
Sbjct: 354 GIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRIT-----PDDVTYNTLMR 402


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 239/506 (47%), Gaps = 41/506 (8%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A A+F  +I     PSLV ++   +A+   K+FN +     Q+E NG+  +    N
Sbjct: 68  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN F        A     K+ + G  P T+T+NTLIKG  + GK  E+V L+D M   
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 187

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +P++ TYN +V   C   + + A +++ KM    +K DV TY+TI  +  ++G  D 
Sbjct: 188 G-CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 246

Query: 267 AEEVIVEMEHNGVQ-----------------------------------PNGRTCGIIIS 291
           A  +  EME  G++                                   PN  T  +++ 
Sbjct: 247 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 306

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
            + KEGK++EA    + M   G+ PN++ +N L+ G+         + +L LM   + +P
Sbjct: 307 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 366

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           D++T+++++  +     +D   ++F ++ K G+  +A  YSIL +G+ +  + + AEEL 
Sbjct: 367 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 426

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M+  G  P+V+ +  ++ G C +G +++A+E+F+ + +  +   +  + T++ G  + 
Sbjct: 427 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 486

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAE 531
            +   A  +   +   GV P   T+ ++       G   EA  +L K++      +  A 
Sbjct: 487 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME-----EDGNAP 541

Query: 532 EDIPVESLERLYHKEATTASYPNLLQ 557
            D    +L R + ++    +   L++
Sbjct: 542 NDCTYNTLIRAHLRDGDLTASAKLIE 567



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 237/469 (50%), Gaps = 14/469 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L   GK  EA  + + ++E G +P +VTY +++  +      +    ++ ++EE  
Sbjct: 164 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 223

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   ++ +I++    G ++ A+  F +M+  G+  +  TYN+L++G   AGK  +  
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283

Query: 198 KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            LL D++SRE  + PN+ T+NVL+  +  E  + EA  +  +M   G+ P+++TYNT+  
Sbjct: 284 LLLKDMVSRE--IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y       +A  ++  M  N   P+  T   +I GYC   ++ + ++  R + + G+  
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N V +++L++GF +       +E+   M    V PDV+TY  +++     G ++K  EIF
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           +D+ K+ +      Y+ + +G  +  + E A  L  ++   G  PNV+ +T +ISG C  
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           GS+  A  +  KM E G +PN  T+ TL+  +        + ++++ MK+ G     S+ 
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 581

Query: 497 -----LLLAEARRATGLTKEAKRILSK-IKNKERTNEMEAEEDIPVESL 539
                +LL+  +R T      +  LSK  K+++   E+   E I + SL
Sbjct: 582 KMVIDMLLSAMKRLT-----LRYCLSKGSKSRQDLLELSGSEKIRLSSL 625



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/177 (24%), Positives = 83/177 (46%), Gaps = 11/177 (6%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T ++  + + GK ++A  +F +L   G KP+++TYT +++ L  +   +  + ++ ++EE
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK--- 192
           +G  P+   +N +I A    G++  +     +MK  G +   S+   +I     A K   
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLT 596

Query: 193 -----PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
                 + S    DL+   G+ K  L +   +    CN   IT + NV + + A GM
Sbjct: 597 LRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCN--TITTSLNV-NTIEARGM 650


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/378 (30%), Positives = 197/378 (52%), Gaps = 6/378 (1%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           P+++ +N VI  F   G ++ A+D   +M+E  G+ P   TY T+I G+   G+ +E+VK
Sbjct: 70  PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 129

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           + D M  +G VKP    YN L+  +C++  +  A     +M   G+   V TYN +  A 
Sbjct: 130 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 189

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
             +G   +A E++ EM   G+ P+  T  I+I+G+CKEG +K+AL     M   GV   +
Sbjct: 190 FMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 249

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           V +  LI    +       D++        + PD++ Y+ ++N+ ST+G +D+  EI  +
Sbjct: 250 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 309

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M K  I PD   Y+ L +G       ++A +L+  M + G  P++V + T+ISG+   G 
Sbjct: 310 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGD 369

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +  A+ + ++M   G +P L T+  L+ G  +  Q   AE +++ M   G+ P  ST++ 
Sbjct: 370 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 429

Query: 499 LAEARRATGLTKEAKRIL 516
           L E     GLT E +R +
Sbjct: 430 LIE-----GLTTEDERAI 442



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/394 (28%), Positives = 202/394 (51%), Gaps = 7/394 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE-N 136
           ++  L   GKP  A  +   +     +P+ VTY T++A    + R  +   IM ++ E  
Sbjct: 47  MLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 102

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIAGKPEE 195
           G+ P+   +  VI+ + + G ++EA+  F +M   G + P    YN LI GY   GK + 
Sbjct: 103 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 162

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++   D M   G V   + TYN+LV A   +   TEA+ ++ +M   G+ PDV TYN + 
Sbjct: 163 ALLYRDRMVERG-VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILI 221

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + + G   +A E+   M   GV+    T   +I    K+G+++E  +        G+ 
Sbjct: 222 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIR 281

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+LV++N LI       + D   E++  M++ R+ PD +TY+T+M      G +D+ +++
Sbjct: 282 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 341

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            D+M K GI+PD   Y+ L  GY  + + + A  +   M+  GF+P ++ +  +I G C 
Sbjct: 342 IDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 401

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +G  D A  +  +M E+G++P+  T+ +L+ G +
Sbjct: 402 NGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 435



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 183/366 (50%), Gaps = 11/366 (3%)

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A   F  M    L   T+T+N +++    AGKP  +++LL  M R     PN  TYN ++
Sbjct: 25  AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNTVI 79

Query: 221 RAWCNEKNITEAWNVMHKMAA-SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG- 278
             +C+   +  A ++M +M    G+ P+  TY T+ + + + G  D+A +V  EM   G 
Sbjct: 80  AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 139

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           V+P       +I GYC +GK+  AL +   M E GV   +  +NLL+      MD  G +
Sbjct: 140 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL--FMDGRGTE 197

Query: 339 --EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             E++  M    + PDV TY+ ++N     G + K  EIF++M + G++     Y+ L  
Sbjct: 198 AYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIY 257

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
              ++ + ++ ++L    +  G  P++V++  +I+   + G++DRA E+  +M +  ++P
Sbjct: 258 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 317

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +  T+ TLM G     +   A +++  M   G+ P   T+  L       G  K+A RI 
Sbjct: 318 DDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIR 377

Query: 517 SKIKNK 522
           +++ NK
Sbjct: 378 NEMMNK 383



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 149/288 (51%), Gaps = 1/288 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+    ++GK   A    + ++E G   ++ TY  L+ AL +  R    + ++ ++   G
Sbjct: 150 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 209

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N +IN   + GN+++A++ F  M   G+  T  TY +LI      G+ +E+ 
Sbjct: 210 LAPDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETD 269

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL D   R G ++P+L  YN L+ +     NI  A+ +M +M    + PD VTYNT+   
Sbjct: 270 KLFDEAVRRG-IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 328

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G  D+A ++I EM   G+QP+  T   +ISGY  +G +K+ALR    M   G +P 
Sbjct: 329 LCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 388

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
           L+ +N LI+G  +    D  + ++  M E  + PD  TY +++   +T
Sbjct: 389 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 436



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 88/327 (26%), Positives = 156/327 (47%), Gaps = 2/327 (0%)

Query: 86  GKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
           G+  EA  +F+ ++  G  KP  V Y  L+     Q + ++      ++ E G+      
Sbjct: 122 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 181

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +N +++A    G   EA +   +M   GL P   TYN LI G+   G  ++++++ + MS
Sbjct: 182 YNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYNILINGHCKEGNVKKALEIFENMS 241

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G V+  + TY  L+ A   +  + E   +  +    G++PD+V YN +  +++ +G  
Sbjct: 242 RRG-VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 300

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           D+A E++ EME   + P+  T   ++ G C  G++ EA +    M + G+ P+LV +N L
Sbjct: 301 DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTL 360

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G+    D      +   M     NP ++TY+ ++      G  D  + +  +M + GI
Sbjct: 361 ISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 420

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELL 411
            PD   Y  L +G   E E    +E L
Sbjct: 421 TPDDSTYISLIEGLTTEDERAIDDERL 447



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 101/189 (53%), Gaps = 2/189 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M++   R TV + T L+ +L ++G+ QE   +F+  +  G +P LV Y  L+ + +    
Sbjct: 240 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 299

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    IM ++E+  + PD + +N ++      G ++EA     +M + G+ P   TYNT
Sbjct: 300 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 359

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY + G  ++++++ + M  +G   P L TYN L++  C      +A N++ +M  +
Sbjct: 360 LISGYSMKGDVKDALRIRNEMMNKG-FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 418

Query: 243 GMKPDVVTY 251
           G+ PD  TY
Sbjct: 419 GITPDDSTY 427


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 220/419 (52%), Gaps = 7/419 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++T L+  L  +G+  +A    + ++  G   + V Y TL+  L    + ++   ++ +V
Sbjct: 128 TLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRV 187

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +   + P+ + +N +I++  +   + EA D + +M   G++P   TY+ LI G+ I GK 
Sbjct: 188 DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKL 247

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            +++ L + M  E  + P++ T+++LV  +C E  + EA NV+  M   G+KPDVVTY +
Sbjct: 248 NDAIGLFNKMISE-EINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCS 306

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    + ++A+ +   M   GV  N ++  I+I+G+CK  K+ EA+   + M    
Sbjct: 307 LMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKN 366

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMD 370
           + P++V +N LI G  +      +   L L+ E     V  D ITY++I++A      +D
Sbjct: 367 IIPDVVTYNSLIDGLCK---SGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVD 423

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +   M   GI+PD + Y+IL  G  +    + A+ +   ++  G++  V  +T +I
Sbjct: 424 KAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMI 483

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            G+C +   D+A+ +  KM ++G  PN KT+E ++    E  +   AE++L+ M A G+
Sbjct: 484 QGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 211/425 (49%), Gaps = 1/425 (0%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           FN ++     P +  +  +L +L     + +  S+  ++E NG+  D + FN +IN FS+
Sbjct: 44  FNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQ 103

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
            G+   +   F  + + G  P   T  TLIKG  + G+  +++   D +   G    N  
Sbjct: 104 LGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALG-FHLNKV 162

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
            Y  L+   C     + A  ++ ++    ++P+VV YNTI  +  +    ++A ++  EM
Sbjct: 163 CYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEM 222

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G+ P+  T   +ISG+C  GK+ +A+     M    ++P++  F++L+ GF +    
Sbjct: 223 VSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRV 282

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
                VLA+M +  + PDV+TY ++M+ +     ++K K IF+ M + G+  +  +Y+I+
Sbjct: 283 KEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIM 342

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G+ + ++ ++A  L   M      P+VV + ++I G C  G +  A+++ D+M + GV
Sbjct: 343 INGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGV 402

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
             +  T+ +++    +  Q  +A  +L  MK  G+ P   T+ +L +     G  K+A+ 
Sbjct: 403 PHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQN 462

Query: 515 ILSKI 519
           I   +
Sbjct: 463 IFEDL 467



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/348 (24%), Positives = 160/348 (45%), Gaps = 36/348 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++     GK  +A  +FN +I     P + T++ L+     + R     ++++
Sbjct: 231 VVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLA 290

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G+ PD + + ++++ +     + +A   F  M + G+T    +YN +I G+    
Sbjct: 291 MMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIK 350

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E++ L   M  + N+ P++ TYN L+   C    I+ A  ++ +M   G+  D +TY
Sbjct: 351 KVDEAMNLFKEMHCK-NIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITY 409

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N+I  A  +N + D+A  ++ +M+  G+QP+  T  I+I G CK G++K+A         
Sbjct: 410 NSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQN------- 462

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
                  +  +LL+KG+                     N  V TY+ ++  +      DK
Sbjct: 463 -------IFEDLLVKGY---------------------NITVYTYTVMIQGFCDNDLFDK 494

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
              +   M   G  P+A  Y I+      + E + AE+LL  MI  G 
Sbjct: 495 ALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/314 (22%), Positives = 160/314 (50%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           +  +L T+N+L+  +    +   +++V   +   G +P+ +T  T+       G+  QA 
Sbjct: 87  IASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQAL 146

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
               ++   G   N    G +I+G CK G+   AL+  R +    V PN+V++N +I   
Sbjct: 147 HFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSM 206

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            ++   +   ++ + M    ++PDV+TYS +++ +   G ++    +F+ M    I PD 
Sbjct: 207 CKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDV 266

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
           + +SIL  G+ +E   ++A+ +L  M++ G  P+VV + +++ G+C    +++A  +F+ 
Sbjct: 267 YTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNT 326

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M + GV+ N++++  ++ G+ + ++   A  + + M    + P   T+  L +    +G 
Sbjct: 327 MAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGK 386

Query: 509 TKEAKRILSKIKNK 522
              A +++ ++ ++
Sbjct: 387 ISYALKLVDEMHDR 400



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 31/152 (20%), Positives = 66/152 (43%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++L +  +  +A A+   + + G +P + TYT L+  L    R     +I   +   G
Sbjct: 412 ILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKG 471

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            +     +  +I  F ++   ++A+    KM+++G  P   TY  +I       + + + 
Sbjct: 472 YNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAE 531

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
           KLL  M   G +    + Y +  R +    N+
Sbjct: 532 KLLREMIARGLLFGWKKAYCLFTRFFQRRSNL 563


>gi|255571081|ref|XP_002526491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534166|gb|EEF35882.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 884

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 143/546 (26%), Positives = 255/546 (46%), Gaps = 32/546 (5%)

Query: 62  FCMNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           F M K  C   V +   L+N+   RG+  +A    + +I+ G KPSL+T++T++ A   +
Sbjct: 302 FVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNE 361

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
                   I   ++E G+ P+   +N +++ + ++ ++ +A   + +M++ G+ P  +T+
Sbjct: 362 GNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATF 421

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           N L+ G    GK  +S +L    S    V P+   Y+V V   C    + EA   +  M 
Sbjct: 422 NILVAGNYKYGKEADSYELFRDWSLSSLV-PDCSLYDVSVAGLCWAGQLDEAMQFLEDML 480

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
             GM P VV +N++  AY++ G  D A +    M   G+ P+  TC  ++ G  K+G+++
Sbjct: 481 EKGMPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQ 540

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           EA      M + G+  N V F +L+ G+ ++ D  G   +   M+   + PD I +S  +
Sbjct: 541 EARDLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFI 600

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           +  S AG +++  E F +M K G  P+   Y+ L  G     +  +A +L   M + G  
Sbjct: 601 DGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLL 660

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P++     II+G+C +G M  A + F +M   GV+P+  T+ TL+ GY +      A+E 
Sbjct: 661 PDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEF 720

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLE 540
           L  M A G  P  +T+ +  +   ++     A  +L         +E+ A   +P     
Sbjct: 721 LNKMYASGWDPDITTYNIRIQGFCSSQKISRAVTML---------DELIAVGVVP----- 766

Query: 541 RLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYLS 600
                   T +Y  ++   N V +D    A  L    + +    + +      TT++ LS
Sbjct: 767 -------NTVTYNTMM---NAVCTDMLDRAMVLTAKLLKMAFVPNVV------TTNVLLS 810

Query: 601 HSCKSG 606
           H CK G
Sbjct: 811 HFCKQG 816



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 203/448 (45%), Gaps = 1/448 (0%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           +  LM   +      E+  I + + E G +PS    + L   L     + S+  ++  + 
Sbjct: 211 LNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMI 270

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
            +G  P +  FN +I  F + G +  A    + M +    P    YN LI  Y I G+  
Sbjct: 271 RDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTS 330

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           +++  L LM + G  KP+L T++ ++ A+CNE N+ EA  +   +   G+ P+V  YNT+
Sbjct: 331 DALGFLHLMIKNG-CKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTL 389

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
            + Y +  +  QA  +  EM   G+ P+G T  I+++G  K GK  ++    R      +
Sbjct: 390 MSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLSSL 449

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P+  ++++ + G       D   + L  M E  + P V+ +++++ A+S AGF D   +
Sbjct: 450 VPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNAHK 509

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
            +  M   G+ P +   S +  G  ++   ++A +LL  MI+ G   N V FT ++ G+ 
Sbjct: 510 AYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMIDKGLPVNKVAFTVLLDGYF 569

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G    A  ++ +M   G+ P+   F   + G S+A     A E    M   G  P   
Sbjct: 570 KVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNF 629

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
            +  L       G   EA ++  +++ K
Sbjct: 630 VYNSLIHGLCNCGKLHEALKLEREMRQK 657



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 186/392 (47%), Gaps = 2/392 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  ++  +F +       P    Y   +A L    + +     +  + E GM P  + F
Sbjct: 432 GKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAF 491

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N+VI A+S +G  + A   +  M   GL P++ST ++++ G    G+ +E+  LL  M  
Sbjct: 492 NSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEARDLLYKMID 551

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G +  N   + VL+  +    +   A ++ ++M A G+ PD + ++      ++ G  +
Sbjct: 552 KG-LPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGLSKAGLVE 610

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A E   EM   G  PN      +I G C  GK+ EAL+  R M++ G+ P++   N++I
Sbjct: 611 EAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDIFTTNIII 670

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF +        +  A M    V PD +TY+T++  +     M    E  + M  +G  
Sbjct: 671 NGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYCKVLDMVSADEFLNKMYASGWD 730

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   Y+I  +G+   Q+  +A  +L  +I  G  PN V + T+++  C+D  +DRA+ +
Sbjct: 731 PDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNTVTYNTMMNAVCTD-MLDRAMVL 789

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
             K+ +    PN+ T   L+  + +   P +A
Sbjct: 790 TAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKA 821



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/422 (21%), Positives = 190/422 (45%), Gaps = 1/422 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +++ L   L+  G       +   +I  G +P    +  ++     +       S++  +
Sbjct: 245 AISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVM 304

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            +   +PD   +N +INA+   G   +A+     M ++G  P+  T++T+I  +   G  
Sbjct: 305 PKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNV 364

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+ K+ + +   G + PN+  YN L+  +   +++ +A  +  +M   G+ PD  T+N 
Sbjct: 365 VEARKIFEGIQEVG-LSPNVAMYNTLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNI 423

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G+   + E+  +   + + P+     + ++G C  G++ EA++F   M E G
Sbjct: 424 LVAGNYKYGKEADSYELFRDWSLSSLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKG 483

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P++V FN +I  +      D   +   +M  F + P   T S+++   S  G + + +
Sbjct: 484 MPPSVVAFNSVIAAYSRAGFEDNAHKAYKIMLMFGLVPSSSTCSSMLLGLSKKGRLQEAR 543

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           ++   M   G+  +  A+++L  GY +  +   A  L   M   G  P+ + F+  I G 
Sbjct: 544 DLLYKMIDKGLPVNKVAFTVLLDGYFKVGDTAGAHSLWYEMEARGICPDAIAFSAFIDGL 603

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G ++ A E F +M + G  PN   + +L+ G     +   A ++ + M+  G+ P  
Sbjct: 604 SKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALKLEREMRQKGLLPDI 663

Query: 494 ST 495
            T
Sbjct: 664 FT 665



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 169/347 (48%), Gaps = 5/347 (1%)

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
           S  NTL++G+  +    ES+++L  M RE  V+P+    ++L R      +    W ++ 
Sbjct: 209 SILNTLMRGFMNSEMAYESLEILSRM-REVGVRPSSSAISILFRLLLRVGDYGSVWKLLR 267

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
            M   G +P    +N +   + Q G    AE ++  M     +P+     I+I+ Y   G
Sbjct: 268 GMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRG 327

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
           +  +AL F   M + G  P+L+ F+ +I  F    +     ++   ++E  ++P+V  Y+
Sbjct: 328 RTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYN 387

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           T+M+ +  A  + +   ++++M   GI PD   ++IL  G  +  +   + EL      S
Sbjct: 388 TLMSGYFKARDVCQANMLYEEMRDKGIAPDGATFNILVAGNYKYGKEADSYELFRDWSLS 447

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
              P+  ++   ++G C  G +D A++  + M E G+ P++  F +++  YS A     A
Sbjct: 448 SLVPDCSLYDVSVAGLCWAGQLDEAMQFLEDMLEKGMPPSVVAFNSVIAAYSRAGFEDNA 507

Query: 478 EEILQIMKAFGVHPQKSTF--LLLAEARRATGLTKEAKRILSKIKNK 522
            +  +IM  FG+ P  ST   +LL  +++  G  +EA+ +L K+ +K
Sbjct: 508 HKAYKIMLMFGLVPSSSTCSSMLLGLSKK--GRLQEARDLLYKMIDK 552



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/243 (27%), Positives = 125/243 (51%), Gaps = 2/243 (0%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C    + +  ++ L + G  +EA   F+ + + G  P+   Y +L+  L    + +    
Sbjct: 590 CPDAIAFSAFIDGLSKAGLVEEAYEAFSEMSKKGFVPNNFVYNSLIHGLCNCGKLHEALK 649

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +  ++ + G+ PD    N +IN F + G M+ A D F +M   G+TP T TYNTLI GY 
Sbjct: 650 LEREMRQKGLLPDIFTTNIIINGFCKEGRMKSAFDAFAEMHHIGVTPDTVTYNTLIGGYC 709

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
                  + + L+ M   G   P++ TYN+ ++ +C+ + I+ A  ++ ++ A G+ P+ 
Sbjct: 710 KVLDMVSADEFLNKMYASG-WDPDITTYNIRIQGFCSSQKISRAVTMLDELIAVGVVPNT 768

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTYNT+  A   +   D+A  +  ++      PN  T  +++S +CK+G  ++AL + + 
Sbjct: 769 VTYNTMMNAVCTD-MLDRAMVLTAKLLKMAFVPNVVTTNVLLSHFCKQGMPEKALIWGQK 827

Query: 309 MKE 311
           + +
Sbjct: 828 LNK 830



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 134/277 (48%), Gaps = 5/277 (1%)

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV-IVEMEHNGVQPNGRTCGIIISGYCK 295
           H +AA  ++  ++  + I+    + G +  A  V  +   H+  + +      ++ G+  
Sbjct: 163 HILAAESLQ--LLAQDVISWVIRRIGASRSAHLVEFMWANHHKYESDFSILNTLMRGFMN 220

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
                E+L     M+E GV P+    ++L +  + + D   V ++L  M      P    
Sbjct: 221 SEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLLRGMIRDGPRPCNHN 280

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           ++ ++  +   G++   + +   M K   +PD +AY+IL   Y        A   L  MI
Sbjct: 281 FNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIRGRTSDALGFLHLMI 340

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           ++G  P+++ F+TII+ +C++G++  A ++F+ + E G+SPN+  + TLM GY +AR   
Sbjct: 341 KNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQEVGLSPNVAMYNTLMSGYFKARDVC 400

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           +A  + + M+  G+ P  +TF +L       G  KEA
Sbjct: 401 QANMLYEEMRDKGIAPDGATFNILVAGNYKYG--KEA 435



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 69/169 (40%)

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           D    +T+M  +  +    +  EI   M + G++P + A SIL +  +R  +     +LL
Sbjct: 207 DFSILNTLMRGFMNSEMAYESLEILSRMREVGVRPSSSAISILFRLLLRVGDYGSVWKLL 266

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             MI  G  P    F  +I  +C  G +  A  +   M +    P++  +  L+  Y   
Sbjct: 267 RGMIRDGPRPCNHNFNIMILCFCQKGYLRVAESLLFVMPKFCCEPDVYAYNILINAYRIR 326

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            +   A   L +M   G  P   TF  +  A    G   EA++I   I+
Sbjct: 327 GRTSDALGFLHLMIKNGCKPSLITFSTIITAFCNEGNVVEARKIFEGIQ 375


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 213/401 (53%), Gaps = 9/401 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEG-GHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           TV +   ++N L + GK ++A+  F   +EG G KP++V+Y T++   + +        I
Sbjct: 226 TVYTFNIMVNVLCKEGKLKKARE-FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRI 284

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           +  +   G++PDS  + ++I+   + G +EEA   F KM E GL P   TYNTLI GY  
Sbjct: 285 LDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCN 344

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G  E +    D M ++G + P++ TYN+LV A   E  + EA +++ +M   G+ PD +
Sbjct: 345 KGDLERAFSYRDEMVKKG-IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAI 403

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN +   Y++ G A +A ++  EM   G++P   T   +I    +  ++KEA      +
Sbjct: 404 TYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 463

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTA 366
            + GV P++++FN ++ G         V+    L+KE     V PD +T++T+M      
Sbjct: 464 LDQGVSPDVIMFNAMVDGHCA---NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 520

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G +++ + + D+M + GIKPD  +Y+ L  GY R  + + A  +   M+  GF+P ++ +
Sbjct: 521 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 580

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +I   C +   D A E+  +M   G+SP+  T+ +L+ G
Sbjct: 581 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 621



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 113/397 (28%), Positives = 196/397 (49%), Gaps = 1/397 (0%)

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
           ++ T+  ++  L  + +       +  +E  G  P+ + +N +I+ +S  GN+E A    
Sbjct: 226 TVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRIL 285

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
             M+  G+ P + TY +LI G    G+ EE+  L D M   G V PN  TYN L+  +CN
Sbjct: 286 DAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLV-PNAVTYNTLIDGYCN 344

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
           + ++  A++   +M   G+ P V TYN +  A    G   +A+++I EM   G+ P+  T
Sbjct: 345 KGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAIT 404

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
             I+I+GY + G  K+A      M   G+ P  V +  LI            D++   + 
Sbjct: 405 YNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKIL 464

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           +  V+PDVI ++ +++     G +++   +  +M +  + PD   ++ L +G  RE + E
Sbjct: 465 DQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVE 524

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +A  LL  M   G  P+ + + T+ISG+   G +  A  V D+M   G +P L T+  L+
Sbjct: 525 EARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALI 584

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
               + ++   AEE+L+ M   G+ P  ST+L L E 
Sbjct: 585 KCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEG 621



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 190/381 (49%), Gaps = 1/381 (0%)

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           SI F+ ++    E    +EA   F+ MKE G+ P   T N ++  +    + E +  L  
Sbjct: 157 SIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYA 216

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M R   +   + T+N++V   C E  + +A   +  M   G KP+VV+YNTI   Y+  
Sbjct: 217 EMFRL-RISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSR 275

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           G  + A  ++  M   G++P+  T G +ISG CKEG+++EA      M E G+ PN V +
Sbjct: 276 GNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTY 335

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N LI G+    D +        M +  + P V TY+ +++A    G M +  ++  +M K
Sbjct: 336 NTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRK 395

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            GI PDA  Y+IL  GY R    +KA +L   M+  G  P  V +T++I        M  
Sbjct: 396 KGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKE 455

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A ++F+K+ + GVSP++  F  ++ G+       RA  +L+ M    V P + TF  L +
Sbjct: 456 ADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQ 515

Query: 502 ARRATGLTKEAKRILSKIKNK 522
            R   G  +EA+ +L ++K +
Sbjct: 516 GRCREGKVEEARMLLDEMKRR 536



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 55/115 (47%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   LM      GK +EA+ + + +   G KP  ++Y TL++    +        +  ++
Sbjct: 509 TFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEM 568

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
              G +P  + +NA+I    ++   + A +   +M   G++P  STY +LI+G G
Sbjct: 569 LSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 623


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/440 (26%), Positives = 224/440 (50%), Gaps = 1/440 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L    K  EA A+ + +++ G +P LVTY  ++  L  +   +   S++ ++E+  
Sbjct: 191 LIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGK 250

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++ D + +N +I+   +  ++++A   F KM+  G+ P   TYN+LI      G+  ++ 
Sbjct: 251 IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDAS 310

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL  M  E  + PN+ T++ L+ A+  E  + EA  +  +M    + PD+ TY+++   
Sbjct: 311 RLLSNMI-ERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLING 369

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           +  +   D+A+ +   M      PN  T   +I G+CK  +++E +   R M + G+  N
Sbjct: 370 FCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGN 429

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +N LI+G  +  D D   ++   M    V PD+ITYS +++     G ++K   +F+
Sbjct: 430 TVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFE 489

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            + K+ ++PD + Y+I+ +G  +  + E   +L  ++   G  PNV+I+TT+ISG+C  G
Sbjct: 490 YLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKG 549

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
             + A  +F +M E G  P+   + TL+           + E+++ M++ G     ST  
Sbjct: 550 LKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTIS 609

Query: 498 LLAEARRATGLTKEAKRILS 517
           ++        L K    +LS
Sbjct: 610 MVINMLHDGRLEKSYLEMLS 629



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 213/427 (49%), Gaps = 6/427 (1%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A  +F  +++    PS+V +  LL+A+   K+F+ + S+  +++   +  D   +N
Sbjct: 60  KLDDAIGLFGEMVQSRPLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYN 119

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN F     +  A+    KM + G  P   T ++L+ GY  + +  ++V L+D M   
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 179

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  KP+  T+N L+         +EA  ++ +M   G +PD+VTY  +     + G+ D 
Sbjct: 180 G-YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDL 238

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  ++ +ME   ++ +      II G CK   I +A      M+  G+ P++  +N LI 
Sbjct: 239 ALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLIS 298

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
                        +L+ M E ++NP+V+T+S +++A+   G + + ++++D+M K  I P
Sbjct: 299 CLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP 358

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   YS L  G+      ++A+ +   MI     PNVV + T+I G+C    ++  +E+F
Sbjct: 359 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            +M + G+  N  T+ TL+ G  +A     A++I + M + GV P   T+ +L +     
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLD----- 473

Query: 507 GLTKEAK 513
           GL K  K
Sbjct: 474 GLCKYGK 480



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 216/436 (49%), Gaps = 1/436 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +++ L+N      +  +A A+ + ++E G+KP  VT+ TL+  L +  + +   +++ 
Sbjct: 150 IVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVD 209

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G  PD + + AV+N   + G+++ A+    KM++  +      YNT+I G     
Sbjct: 210 QMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYK 269

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +++  L + M  +G ++P++ TYN L+   CN    ++A  ++  M    + P+VVT+
Sbjct: 270 HIDDAFALFNKMETKG-IRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTF 328

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  A+ + G+  +AE++  EM    + P+  T   +I+G+C   ++ EA      M  
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMIS 388

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
               PN+V +N LIKGF +    +   E+   M +  +  + +TY+T++     AG  D 
Sbjct: 389 KDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDM 448

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            ++IF  M   G+ PD   YSIL  G  +  + EKA  +   + +S   P++  +  +I 
Sbjct: 449 AQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIE 508

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G ++   ++F  +   GV PN+  + T++ G+        A+ + + MK  G  P
Sbjct: 509 GMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLP 568

Query: 492 QKSTFLLLAEARRATG 507
               +  L  AR   G
Sbjct: 569 DSGCYNTLIRARLRDG 584



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 222/444 (50%), Gaps = 3/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N    R +   A A+   +++ G++P +VT ++LL      KR +   +++ Q+ E G
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMG 180

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD++ FN +I+         EA+    +M + G  P   TY  ++ G    G  + ++
Sbjct: 181 YKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLAL 240

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M + G ++ ++  YN ++   C  K+I +A+ + +KM   G++PDV TYN++ + 
Sbjct: 241 SLLKKMEK-GKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISC 299

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G    A  ++  M    + PN  T   +I  + KEGK+ EA +    M +  + P+
Sbjct: 300 LCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 359

Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +  ++ LI GF  + DR D    +  LM      P+V+TY+T++  +  A  +++  E+F
Sbjct: 360 IFTYSSLINGFC-MHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELF 418

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M + G+  +   Y+ L +G  +  + + A+++   M+  G  P+++ ++ ++ G C  
Sbjct: 419 REMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKY 478

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +++A+ VF+ + +  + P++ T+  ++ G  +A +     ++   +   GV P    +
Sbjct: 479 GKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIY 538

Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
             +       GL +EA  +  ++K
Sbjct: 539 TTMISGFCRKGLKEEADALFREMK 562



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/323 (27%), Positives = 160/323 (49%), Gaps = 1/323 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L   G+  +A  + +N+IE    P++VT++ L+ A   + +      +  
Sbjct: 290 VFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD 349

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +  +DPD   ++++IN F     ++EA   F  M      P   TYNTLIKG+  A 
Sbjct: 350 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAK 409

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE ++L   MS+ G V  N  TYN L++      +   A  +  KM + G+ PD++TY
Sbjct: 410 RVEEGMELFREMSQRGLV-GNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITY 468

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +     + G+ ++A  V   ++ + ++P+  T  I+I G CK GK+++      ++  
Sbjct: 469 SILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 528

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV PN++I+  +I GF     ++  D +   MKE    PD   Y+T++ A    G    
Sbjct: 529 KGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAA 588

Query: 372 CKEIFDDMGKAGIKPDAHAYSIL 394
             E+  +M   G   DA   S++
Sbjct: 589 SAELIKEMRSCGFVGDASTISMV 611



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 112/228 (49%), Gaps = 1/228 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ++K+    V +   L+    +  + +E   +F  + + G   + VTY TL+  L      
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    I  ++  +G+ PD I ++ +++   + G +E+A+  F  +++S + P   TYN +
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I+G   AGK E+   L   +S +G VKPN+  Y  ++  +C +    EA  +  +M   G
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKG-VKPNVIIYTTMISGFCRKGLKEEADALFREMKEDG 565

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
             PD   YNT+  A  ++G+   + E+I EM   G   +  T  ++I+
Sbjct: 566 TLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVIN 613


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 226/455 (49%), Gaps = 4/455 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N +   G+  +A+ + N L   G +P  V+YTTLL  L   KR++ +  + +++ E  
Sbjct: 219 IINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKN 278

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + F+ +I  F   G +E A+    +M E G    T+  N +I      G+ +++ 
Sbjct: 279 CMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICKQGRVDDAF 338

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL+ M   G   P+  +Y  +++  C  +   +A  ++++M  +   P+ VT+NT    
Sbjct: 339 KLLNDMGSYG-CNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVTFNTFICI 397

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             Q G  +QA  +I +M  +G      T   +++G+C +G I  AL   R+M      PN
Sbjct: 398 LCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPN 454

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +  L+ G       DG  E++A M      P+V+T++ +++ +   GF+++  E+ +
Sbjct: 455 TITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLEEAIELVE 514

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + G  P+   Y+ L  G  ++   E A ELL  ++  G  P+V+ F++II     + 
Sbjct: 515 QMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKED 574

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ A+++F  + + G+ P    +  ++ G  +  +   A +    M + G  P +ST++
Sbjct: 575 RIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFFAYMVSNGCMPNESTYI 634

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
           +L E     GL KEA+ +LS + ++   N+   EE
Sbjct: 635 ILIEGLAHEGLLKEAQDLLSVLCSRGVLNKNLTEE 669



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 218/488 (44%), Gaps = 71/488 (14%)

Query: 76  TKLMNSLIERGKPQEAQAI---------------FNNLIEG----GH------------- 103
           TKL+ +L  RG+  +A  +               +N L+ G    GH             
Sbjct: 80  TKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPV 139

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
            P   TYT L+  L  + R     S++  +   G  P+ + +  ++ A   +   E+AM 
Sbjct: 140 APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMA 199

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              +M+  G TP   TYN +I G    G+ +++ +LL+ +   G  +P+  +Y  L++  
Sbjct: 200 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYG-FQPDTVSYTTLLKGL 258

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C  K   +   +  +M      P+ VT++ +   + + G  ++A +V+ +M  +G   N 
Sbjct: 259 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNT 318

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG---------------- 327
             C I+I+  CK+G++ +A +    M  YG +P+ + +  ++KG                
Sbjct: 319 TLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNE 378

Query: 328 ---------------FVEIMDRDGVDE----VLALMKEFRVNPDVITYSTIMNAWSTAGF 368
                          F+ I+ + G+ E    ++  M E      V+TY+ ++N +   G 
Sbjct: 379 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH 438

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D   E+F  M     KP+   Y+ L  G    +  + A EL+  M+     PNVV F  
Sbjct: 439 IDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNV 495

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++S +C  G ++ AIE+ ++M EHG +PNL T+ TL+ G ++      A E+L  + + G
Sbjct: 496 LVSFFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKG 555

Query: 489 VHPQKSTF 496
           V P   TF
Sbjct: 556 VSPDVITF 563



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 176/399 (44%), Gaps = 42/399 (10%)

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +G  PD      +I      G   +A       + SG       YNTL+ GY   G  + 
Sbjct: 70  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 129

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +L+  M     V P+  TY  L+R  C+   + +A +++  M   G +P+VVTY  + 
Sbjct: 130 ARRLIGSMP----VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 185

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            A  +N   +QA  V+ EM   G  PN  T  +II+G C+EG++ +A      +  YG  
Sbjct: 186 EAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQ 245

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK---- 371
           P+ V +  L+KG       D V+E+ A M E    P+ +T+  ++  +   G +++    
Sbjct: 246 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 305

Query: 372 -----------------------CKE--------IFDDMGKAGIKPDAHAYSILAKGYVR 400
                                  CK+        + +DMG  G  PD  +Y+ + KG  R
Sbjct: 306 LEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCR 365

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
            +  + A+ELL  M+ +   PN V F T I   C  G +++AI + ++M EHG +  + T
Sbjct: 366 AERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVT 425

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           +  L+ G+         +  L++ ++    P   T+  L
Sbjct: 426 YNALVNGFCVQ---GHIDSALELFRSMPCKPNTITYTTL 461



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 169/359 (47%), Gaps = 16/359 (4%)

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P ++    LI    +AG    +V+L++         P++     L+R  C     ++A  
Sbjct: 42  PASAHLRRLIAREDLAG----AVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTSDAAR 97

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           V+     SG   DV  YNT+   Y + G  D A  +I  M    V P+  T   +I   C
Sbjct: 98  VLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLC 154

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD-GVDEVLALMKEFR---VN 350
             G++ +AL     M   G  PN+V + +L+    E M R+ G ++ +A++ E R     
Sbjct: 155 DRGRVADALSLLDDMLRRGCQPNVVTYTVLL----EAMCRNSGFEQAMAVLDEMRAKGCT 210

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P+++TY+ I+N     G +D  +E+ + +   G +PD  +Y+ L KG    +  +  EEL
Sbjct: 211 PNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEEL 270

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
              M+E    PN V F  +I  +C  G ++RAI+V ++M EHG + N      ++    +
Sbjct: 271 FAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICK 330

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK-IKNKERTNEM 528
             +   A ++L  M ++G +P   ++  + +         +AK +L++ ++N    NE+
Sbjct: 331 QGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEV 389



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/349 (22%), Positives = 157/349 (44%), Gaps = 6/349 (1%)

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP-NLRTYNVLVRAWCNEKNIT 230
           G  P       LI+     G+  ++ ++L   + EG+  P ++  YN LV  +C   ++ 
Sbjct: 71  GEAPDVYLCTKLIRNLCRRGRTSDAARVL--RAAEGSGSPVDVFAYNTLVAGYCRYGHLD 128

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
            A  ++  M  +   PD  TY  +       G    A  ++ +M   G QPN  T  +++
Sbjct: 129 AARRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 185

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
              C+    ++A+     M+  G  PN+V +N++I G       D   E+L  +  +   
Sbjct: 186 EAMCRNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQ 245

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           PD ++Y+T++     +   D  +E+F +M +    P+   + +L + + R    E+A ++
Sbjct: 246 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 305

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           L  M E G   N  +   +I+  C  G +D A ++ + M  +G +P+  ++ T++ G   
Sbjct: 306 LEQMTEHGCATNTTLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCR 365

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           A +   A+E+L  M      P + TF          GL ++A  ++ ++
Sbjct: 366 AERWDDAKELLNEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQM 414


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 220/434 (50%), Gaps = 1/434 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A  +F  +     +P L+ ++ L + +   K+++ +  +  Q+E  G+  +    +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN       +  A     K+ + G  P T T++TLI G  + G+  E+++L+D M   
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G+ KP L T N LV   C    +++A  ++ +M  +G +P+ VTY  +     ++G+   
Sbjct: 172 GH-KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTAL 230

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A E++ +ME   ++ +     III G CK+G +  A      M+  G   +++I+  LI+
Sbjct: 231 AMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIR 290

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GF      D   ++L  M + ++ PDV+ +S +++ +   G + + +E+  +M + GI P
Sbjct: 291 GFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISP 350

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   Y+ L  G+ +E + +KA  +L  M+  G  PN+  F  +I+G+C    +D  +E+F
Sbjct: 351 DTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELF 410

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            KM   GV  +  T+ TL+ G+ E  +   A+E+ Q M +  V P   ++ +L +     
Sbjct: 411 RKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDN 470

Query: 507 GLTKEAKRILSKIK 520
           G  ++A  I  KI+
Sbjct: 471 GEPEKALEIFEKIE 484



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 226/448 (50%), Gaps = 3/448 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ ++  L+N L   GK  +A  + + ++E G +P+ VTY  +L  +    +      ++
Sbjct: 176 TLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELL 235

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++EE  +  D++ ++ +I+   + G+++ A + F +M+  G       Y TLI+G+  A
Sbjct: 236 RKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYA 295

Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           G+ ++  KLL D++ R+  + P++  ++ L+  +  E  + EA  +  +M   G+ PD V
Sbjct: 296 GRWDDGAKLLRDMIKRK--ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY ++   + +  + D+A  ++  M   G  PN RT  I+I+GYCK   I + L   R M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              GV  + V +N LI+GF E+   +   E+   M   RV PD+++Y  +++     G  
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEP 473

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +K  EIF+ + K+ ++ D   Y+I+  G     + + A +L  ++   G  P+V  +  +
Sbjct: 474 EKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIM 533

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G C  GS+  A  +F KM E G SPN  T+  L+  +       ++ ++++ +K  G 
Sbjct: 534 IGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGF 593

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILS 517
               ST  ++ +      L K    +LS
Sbjct: 594 SVDASTVKMVVDMLSDGRLKKSFLDMLS 621



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 223/449 (49%), Gaps = 5/449 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L+N L   G+  EA  + + ++E GHKP+L+T   L+  L +  + +    ++ ++
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E G  P+ + +  V+    +SG    AM+   KM+E  +      Y+ +I G    G  
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + +  L + M  +G  K ++  Y  L+R +C      +   ++  M    + PDVV ++ 
Sbjct: 264 DNAFNLFNEMEIKG-FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSA 322

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + + G+  +AEE+  EM   G+ P+  T   +I G+CKE ++ +A      M   G
Sbjct: 323 LIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKG 382

Query: 314 VHPNLVIFNLLIKGFVE--IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             PN+  FN+LI G+ +  ++D DG+ E+   M    V  D +TY+T++  +   G ++ 
Sbjct: 383 CGPNIRTFNILINGYCKANLID-DGL-ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEV 440

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            KE+F +M    ++PD  +Y IL  G     EPEKA E+   + +S    ++ I+  II 
Sbjct: 441 AKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIH 500

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C+   +D A ++F  +   GV P++KT+  ++ G  +      A+ + + M+  G  P
Sbjct: 501 GMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSP 560

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIK 520
              T+ +L  A    G   ++ +++ +IK
Sbjct: 561 NGCTYNILIRAHLGEGDATKSAKLIEEIK 589


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 227/445 (51%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N++ ++G   +A  +  +L   G +P +V+Y  +L  L + KR+  +  +M ++    
Sbjct: 198 VLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMA 257

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + FN +I+    +G  E   +   +M E G TP    Y T+I G    G  + + 
Sbjct: 258 CPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAH 317

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L+ M   G +KPN+  YN L++  C+ +   E   ++ +M       D VT+N +   
Sbjct: 318 EILNRMPSYG-LKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDF 376

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + QNG  D+  E++ +M  +G  P+  T   +I+G+CKEG I EA+   ++M   G  PN
Sbjct: 377 FCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPN 436

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + + +++KG          +++++ M +     + IT++T++N     G +++  E+  
Sbjct: 437 TISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLK 496

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G  PD  +YS +  G  +  + ++A ELL  M+  G  PN +I+++I S    +G
Sbjct: 497 QMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREG 556

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +++ I++FD + +  +  +   +  ++    +  +  RA E L  M + G  P +ST+ 
Sbjct: 557 RINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYT 616

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
           +L     + G  KEA+ +L+++ +K
Sbjct: 617 ILIRGLASEGFVKEAQEMLTELCSK 641



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/396 (26%), Positives = 187/396 (47%), Gaps = 34/396 (8%)

Query: 92  QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINA 151
           Q +   ++     P++VT+ TL++ L     F  +H +++Q+ E+G  PD   +  +I+ 
Sbjct: 247 QELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDG 306

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL----------- 200
             + G+++ A +   +M   GL P    YNTL+KG   A + EE+ +LL           
Sbjct: 307 ICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLD 366

Query: 201 --------DLMSREGNVK---------------PNLRTYNVLVRAWCNEKNITEAWNVMH 237
                   D   + G V                P++ TY  ++  +C E  I EA  ++ 
Sbjct: 367 DVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLK 426

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
            M A G KP+ ++Y  +            AE+++ +M   G   N  T   +I+  CK+G
Sbjct: 427 SMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKG 486

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
            +++A+   + M   G  P+L+ ++ +I G  +    D   E+L +M    ++P+ I YS
Sbjct: 487 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYS 546

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           +I +A S  G ++K  ++FD++    I+ DA  Y+ +     +  E E+A E L  M+ S
Sbjct: 547 SIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSS 606

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           G  PN   +T +I G  S+G +  A E+  ++C  G
Sbjct: 607 GCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 642



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 88/355 (24%), Positives = 158/355 (44%), Gaps = 39/355 (10%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           YN ++ GY  AG+ E + +L    +    V PN  TY  +VRA C    I +A  V+ +M
Sbjct: 93  YNAMVAGYCRAGQLESARRL----AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEM 148

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
              G  P    Y+ I  A  + G    A  V+ ++   G   +   C ++++  C +G +
Sbjct: 149 PRRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSV 208

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            +AL   R +  +G  P++V +N ++KG         V E++  M      P+++T++T+
Sbjct: 209 DKALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTL 268

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++     G  ++  E+   M + G  PD   Y+ +  G  +E   + A E+L  M   G 
Sbjct: 269 ISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGL 328

Query: 420 HPNVVIFTTIISGWCS-----------------------------------DGSMDRAIE 444
            PNVV + T++ G CS                                   +G +DR IE
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           + ++M  HG  P++ T+ T++ G+ +      A  +L+ M A G  P   ++ ++
Sbjct: 389 LLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIV 443



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 124/231 (53%), Gaps = 1/231 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T ++N   + G   EA  +  ++   G KP+ ++YT +L  L   +R+     +MS
Sbjct: 402 VITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMS 461

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G   + I FN +IN   + G +E+A++   +M  +G +P   +Y+T+I G G AG
Sbjct: 462 QMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 521

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E+++LL++M  +G + PN   Y+ +  A   E  I +   +   +  + ++ D V Y
Sbjct: 522 KTDEALELLNVMVNKG-MSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLY 580

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           N + ++  + GE ++A E +  M  +G  PN  T  I+I G   EG +KEA
Sbjct: 581 NAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEA 631



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 125/273 (45%), Gaps = 3/273 (1%)

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +   Y + G+ + A  +   +    V PN  T   ++   C  G+I +AL     M 
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVP---VPPNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  P   +++++++             VL  +       DV   + ++NA    G +D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +  D+   G +PD  +Y+ + KG    +     +EL+  M+     PN+V F T+I
Sbjct: 210 KALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           S  C +G  +R  EV  +M EHG +P+++ + T++ G  +      A EIL  M ++G+ 
Sbjct: 270 SYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLK 329

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           P    +  L +   +    +E + +L+++ +K+
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKD 362



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 77/140 (55%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + +++ L + GK  EA  + N ++  G  P+ + Y+++ +AL+ + R N +  +   +
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++  +  D++ +NAVI++  + G  E A++    M  SG  P  STY  LI+G    G  
Sbjct: 569 QDTTIRSDAVLYNAVISSLCKRGETERAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 628

Query: 194 EESVKLLDLMSREGNVKPNL 213
           +E+ ++L  +  +G ++ +L
Sbjct: 629 KEAQEMLTELCSKGALRKHL 648


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 231/484 (47%), Gaps = 37/484 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV + + ++N L   G  Q   AI   ++  G KP+ V YTTL+ A   + R      I+
Sbjct: 415 TVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 474

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ E G+ PD   +N++I  F ++  MEEA     +M E  L P   TY   I GY  A
Sbjct: 475 ERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKA 534

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ E + +  + M   G V PN+  Y  L+   C E N+TEA++V   + +  +  DV T
Sbjct: 535 GEMEIADRYFNEMLSCG-VLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQT 593

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +    ++NG+  +A  +  E++  G+ PN  T   +ISG CK+G + +A +    M 
Sbjct: 594 YSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMC 653

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G++P++V +N+LI G  +  + +    +   ++   + P+ +TY+ +++ +  +    
Sbjct: 654 IKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 713

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              ++ ++M   G+ PDA  Y+++     +E++ EKA +L   M+E GF  + V F T+I
Sbjct: 714 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLI 772

Query: 431 SGWCSDGSMDRAIEVFDKM-------------------CEHG----------------VS 455
            G+C  G +  A  + ++M                   C+ G                V 
Sbjct: 773 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 832

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P  KT+ +L+ GY           + + M A G+ P K T+ ++ +A    G   EA ++
Sbjct: 833 PTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKL 892

Query: 516 LSKI 519
             +I
Sbjct: 893 KDEI 896



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/449 (26%), Positives = 218/449 (48%), Gaps = 36/449 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N      + +EA+ +   +I+ G KP  +TY  L+     Q        I  ++   G
Sbjct: 282 LINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACG 341

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++ + I +N ++N   ++G ME+A++   +M E G+ P + TY+ LI+G+        + 
Sbjct: 342 IEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAF 401

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LLD M +   + P + TY+V++   C   N+     ++ +M  +G+KP+ V Y T+ TA
Sbjct: 402 ELLDEMKKR-KLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTA 460

Query: 258 YAQNGEADQAEEVIVEMEHNGV-----------------------------------QPN 282
           +A+ G  +++  ++  M   G+                                   +PN
Sbjct: 461 HAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPN 520

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T G  I GY K G+++ A R+   M   GV PN+ I+  LI+G  +  +      V  
Sbjct: 521 AHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFR 580

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            +   RV  DV TYS +++  S  G M +   IF ++ + G+ P+A  Y+ L  G  ++ 
Sbjct: 581 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 640

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             +KA +LL  M   G +P++V +  +I G C  G ++RA  +FD +   G++PN  T+ 
Sbjct: 641 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 700

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            ++ GY +++ P  A ++L+ M   GV P
Sbjct: 701 AMVDGYCKSKNPTAAFQLLEEMLLRGVPP 729



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 228/448 (50%), Gaps = 5/448 (1%)

Query: 82  LIERGKP----QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+E G+      EA  +  ++++ G  P L TY  L+    ++KR      ++ ++ + G
Sbjct: 247 LLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG 306

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ I +NA+I+ F   G++E+A     +M   G+      +NTL+ G   AGK E+++
Sbjct: 307 LKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKAL 366

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +++  M  +G V+P+ +TY++L+   C  +N+  A+ ++ +M    + P V+TY+ I   
Sbjct: 367 EIMQEMMEKG-VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIING 425

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G       ++ EM  NG++PN      +++ + KEG+++E+      M+E G+ P+
Sbjct: 426 LCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPD 485

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  +N LI GF +    +     L  M E R+ P+  TY   ++ +S AG M+     F+
Sbjct: 486 VFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFN 545

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G+ P+   Y+ L +G+ +E    +A  +   ++      +V  ++ +I G   +G
Sbjct: 546 EMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNG 605

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M  A  +F ++ E G+ PN  T+ +L+ G  +     +A ++L+ M   G++P   T+ 
Sbjct: 606 KMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYN 665

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERT 525
           +L +     G  + AK +   I+ +  T
Sbjct: 666 ILIDGLCKAGEIERAKNLFDDIEGRGLT 693



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/473 (25%), Positives = 222/473 (46%), Gaps = 37/473 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N + + GK ++A  I   ++E G +P   TY+ L+      +       ++ ++++  
Sbjct: 352 LLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRK 411

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P  + ++ +IN     GN++       +M  +GL P    Y TL+  +   G+ EES 
Sbjct: 412 LAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESR 471

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L+ M RE  + P++  YN L+  +C  K + EA   + +M    ++P+  TY      
Sbjct: 472 MILERM-REQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDG 530

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR---------- 307
           Y++ GE + A+    EM   GV PN      +I G+CKEG + EA    R          
Sbjct: 531 YSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQD 590

Query: 308 -------------------------TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
                                     ++E G+ PN   +N LI G  +  + D   ++L 
Sbjct: 591 VQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLE 650

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M    +NPD++TY+ +++    AG +++ K +FDD+   G+ P+   Y+ +  GY + +
Sbjct: 651 EMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSK 710

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
            P  A +LL  M+  G  P+  I+  I++  C +   ++A+++F +M E G +  + +F 
Sbjct: 711 NPTAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFN 769

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           TL+ GY ++ +   A  +L+ M      P   T+  L +     G+  EAKR+
Sbjct: 770 TLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRL 822



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 220/462 (47%), Gaps = 18/462 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LM+S  + G   EA  +F        +PSL++  +LL  L    +      +   +  + 
Sbjct: 160 LMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHK 219

Query: 138 MDPDSIFFNAVINAFSESGN-----------------MEEAMDTFWKMKESGLTPTTSTY 180
           + PD   +  +I+A  + GN                 ++EA++    M + GL P   TY
Sbjct: 220 VLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDKGLVPDLYTY 279

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           + LI G+ +  +  E+ KL+ L   +  +KP   TYN L+  +  + +I +A+ +  +M 
Sbjct: 280 DILINGFCMEKRSREA-KLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMV 338

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
           A G++ +++ +NT+     + G+ ++A E++ EM   GV+P+ +T  ++I G+C+   + 
Sbjct: 339 ACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMA 398

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
            A      MK+  + P ++ ++++I G     +  G + +L  M    + P+ + Y+T+M
Sbjct: 399 RAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLM 458

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
            A +  G +++ + I + M + GI PD   Y+ L  G+ + +  E+A   LM M+E    
Sbjct: 459 TAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLR 518

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN   +   I G+   G M+ A   F++M   GV PN+  +  L+ G+ +      A  +
Sbjct: 519 PNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSV 578

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            + + +  V     T+ +L       G   EA  I S+++ K
Sbjct: 579 FRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEK 620



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 195/409 (47%), Gaps = 8/409 (1%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+ + A   FN ++  G  P++  YT L+     +       S+   +    +  D   +
Sbjct: 535 GEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTY 594

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           + +I+  S +G M EA   F +++E GL P   TYN+LI G    G  +++ +LL+ M  
Sbjct: 595 SVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCI 654

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G + P++ TYN+L+   C    I  A N+   +   G+ P+ VTY  +   Y ++    
Sbjct: 655 KG-INPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPT 713

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A +++ EM   GV P+     +I++  CKE K ++AL   + M E G   + V FN LI
Sbjct: 714 AAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGF-ASTVSFNTLI 772

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           +G+ +       + +L  M E +  P+ +TY+++++    AG M + K ++ +M +  + 
Sbjct: 773 EGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVM 832

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P A  Y+ L  GY       +   L   M+  G  P+ + +  +I  +C +G++  A ++
Sbjct: 833 PTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKL 892

Query: 446 FDKMC------EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
            D++       + G    L T   +  G+  A     A E+L+ M  FG
Sbjct: 893 KDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFG 941



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 194/415 (46%), Gaps = 8/415 (1%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L+    + G   EA ++F  ++       + TY+ L+  L+   + +    I S+++E
Sbjct: 560 TALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQE 619

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ P++  +N++I+   + GN+++A     +M   G+ P   TYN LI G   AG+ E 
Sbjct: 620 KGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIER 679

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  L D +   G + PN  TY  +V  +C  KN T A+ ++ +M   G+ PD   YN I 
Sbjct: 680 AKNLFDDIEGRG-LTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVIL 738

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               +  + ++A ++  EM   G      +   +I GYCK GK++EA      M E    
Sbjct: 739 NFCCKEEKFEKALDLFQEMLEKGFAST-VSFNTLIEGYCKSGKLQEANHLLEEMIEKQFI 797

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN V +  LI    +         +   M+E  V P   TY+++++ +   G M +   +
Sbjct: 798 PNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSAL 857

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKA----EELLM--TMIESGFHPNVVIFTTI 429
           F++M   GI+PD   Y ++   Y RE    +A    +E+L+    ++SGF   +   + I
Sbjct: 858 FEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMKSGFRLGLPTCSVI 917

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
             G+   G+MD A EV   M + G   N  +   L+ G         ++ +L+ M
Sbjct: 918 ARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQM 972



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 186/378 (49%), Gaps = 10/378 (2%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F +++   + V++ + L++ L   GK  EA  IF+ L E G  P+  TY +L++    Q 
Sbjct: 581 FILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKGLLPNAFTYNSLISGSCKQG 640

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
             +    ++ ++   G++PD + +N +I+   ++G +E A + F  ++  GLTP   TY 
Sbjct: 641 NVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYA 700

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            ++ GY  +  P  + +LL+ M   G V P+   YNV++   C E+   +A ++  +M  
Sbjct: 701 AMVDGYCKSKNPTAAFQLLEEMLLRG-VPPDAFIYNVILNFCCKEEKFEKALDLFQEMLE 759

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G     V++NT+   Y ++G+  +A  ++ EM      PN  T   +I   CK G + E
Sbjct: 760 KGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGE 818

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A R    M+E  V P    +  L+ G+  I +   V  +   M    + PD +TY  +++
Sbjct: 819 AKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMID 878

Query: 362 AWSTAG-FMDKCKEIFDDM------GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           A+   G  M+ CK + D++       K+G +      S++A+G+      ++A E+L +M
Sbjct: 879 AYCREGNVMEACK-LKDEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSM 937

Query: 415 IESGFHPNVVIFTTIISG 432
           ++ G+  N      ++ G
Sbjct: 938 VKFGWVSNTTSLGDLVDG 955



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 80/337 (23%), Positives = 158/337 (46%), Gaps = 21/337 (6%)

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R  N  PN   +++L+ ++     + EA NV         +P +++ N++     +  + 
Sbjct: 146 RSCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKV 205

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK-----------------EALRFAR 307
           +   +V   M  + V P+  T   +IS +CK G +K                 EA+   R
Sbjct: 206 ELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKR 265

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN--PDVITYSTIMNAWST 365
           +M + G+ P+L  +++LI GF   M++   +  L L++   V   P+ ITY+ +++ +  
Sbjct: 266 SMVDKGLVPDLYTYDILINGFC--MEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMR 323

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G +++   I D+M   GI+ +   ++ L  G  +  + EKA E++  M+E G  P+   
Sbjct: 324 QGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQT 383

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           ++ +I G C   +M RA E+ D+M +  ++P + T+  ++ G            IL+ M 
Sbjct: 384 YSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMV 443

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             G+ P    +  L  A    G  +E++ IL +++ +
Sbjct: 444 MNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQ 480



 Score = 43.1 bits (100), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 6/140 (4%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T ++ T L++     G   E  A+F  ++  G +P  +TY  ++ A   +        + 
Sbjct: 834 TAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLK 893

Query: 131 SQVEENGMDPDSIF------FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
            ++   GM   S F       + +   F  +GNM+EA +    M + G    T++   L+
Sbjct: 894 DEILVKGMPMKSGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLV 953

Query: 185 KGYGIAGKPEESVKLLDLMS 204
            G       E+S  LL  M+
Sbjct: 954 DGNQNGANSEDSDNLLKQMA 973


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 228/487 (46%), Gaps = 49/487 (10%)

Query: 52  TDSQPQT-HCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTY 110
           +D++PQ  H  F       R    M K +N L + GK  EA      +++ G+KP ++  
Sbjct: 64  SDTRPQQQHYDF-------RDTHHM-KALNRLCKTGKYTEALYFLEQMVKRGYKPDVILC 115

Query: 111 TTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE 170
           T L+  L   KR      +M  +E+ G DPDS  +NAVI+ F  S   + A     +MK 
Sbjct: 116 TKLIKGLFTSKRTEKAVRVMEILEQYG-DPDSFAYNAVISGFCRSDRFDAANRVILRMKY 174

Query: 171 SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
            G +P   TYN LI      GK + ++K++D +  E N  P + TY +L+ A     +I 
Sbjct: 175 RGFSPDVVTYNILIGSLCARGKLDLALKVMDQL-LEDNCNPTVITYTILIEATIIHGSID 233

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA----------------------- 267
           +A  ++ +M + G++PD+ TYN I     + G  D+A                       
Sbjct: 234 DAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGL 293

Query: 268 ---------EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
                    E ++ +M   G +PN  T  ++IS  C++GK  EA+   R MKE G++P+ 
Sbjct: 294 LNEGRWEAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDA 353

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEI 375
             ++ LI  F +      VD  +  + +       PD++ Y+TIM +    G  D+   I
Sbjct: 354 YCYDPLISAFCK---EGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNI 410

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F  + + G  P+A +Y+ +        +  +A  +++ M+ +G  P+ + + ++IS  C 
Sbjct: 411 FKKLEEVGCPPNASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCR 470

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           DG +D AI +   M      P + ++  ++ G  +A +   A E+L +M   G  P ++T
Sbjct: 471 DGMVDEAIGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETT 530

Query: 496 FLLLAEA 502
           + LL E 
Sbjct: 531 YTLLVEG 537



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 179/368 (48%), Gaps = 4/368 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ SL  RGK   A  + + L+E    P+++TYT L+ A  I    +    ++ ++   G
Sbjct: 187 LIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRG 246

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N ++    + G ++ A   F  +     TP+ + YN L+KG    G+ E   
Sbjct: 247 LQPDMYTYNVIVRGMCKRGLVDRA---FEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGE 303

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+  M  +G  +PN+ TY+VL+ + C +    EA +V+  M   G+ PD   Y+ + +A
Sbjct: 304 RLMSDMIVKG-CEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISA 362

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G+ D A   + +M   G  P+      I+   CK+G+  EAL   + ++E G  PN
Sbjct: 363 FCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPN 422

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +N +        D+     ++  M    V+PD ITY++++++    G +D+   +  
Sbjct: 423 ASSYNTMFGALWSSGDKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLV 482

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM +   +P   +Y+I+  G  +      A E+L  M+++G  PN   +T ++ G    G
Sbjct: 483 DMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAG 542

Query: 438 SMDRAIEV 445
               A+E+
Sbjct: 543 WRSYAVEL 550



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 94/407 (23%), Positives = 186/407 (45%), Gaps = 34/407 (8%)

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           +N   ++G   EA+    +M + G  P       LIKG   + + E++V++++++ + G+
Sbjct: 84  LNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYGD 143

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
             P+   YN ++  +C       A  V+ +M   G  PDVVTYN +  +    G+ D A 
Sbjct: 144 --PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLAL 201

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           +V+ ++  +   P   T  I+I      G I +A+R    M   G+ P++  +N++++G 
Sbjct: 202 KVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGM 261

Query: 329 VE--IMDR------------------------------DGVDEVLALMKEFRVNPDVITY 356
            +  ++DR                              +  + +++ M      P+++TY
Sbjct: 262 CKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTY 321

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           S ++++    G   +  ++   M + G+ PDA+ Y  L   + +E + + A   +  MI 
Sbjct: 322 SVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMIS 381

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
           +G+ P++V + TI+   C  G  D A+ +F K+ E G  PN  ++ T+      +    R
Sbjct: 382 AGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIR 441

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           A  ++  M + GV P + T+  L  +    G+  EA  +L  ++  E
Sbjct: 442 ALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTE 488



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/232 (25%), Positives = 110/232 (47%), Gaps = 1/232 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++SL   GK  EA  +   + E G  P    Y  L++A   + + +     +  +   G
Sbjct: 324 LISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAG 383

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + +N ++ +  + G  +EA++ F K++E G  P  S+YNT+      +G    ++
Sbjct: 384 WLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDKIRAL 443

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            ++  M   G V P+  TYN L+ + C +  + EA  ++  M  +  +P V++YN +   
Sbjct: 444 TMILEMLSNG-VDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIVLLG 502

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
             +      A EV+  M  NG QPN  T  +++ G    G    A+  A+++
Sbjct: 503 LCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSL 554


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/438 (25%), Positives = 216/438 (49%), Gaps = 4/438 (0%)

Query: 76  TKLMNSLIE-RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           TKL+      R  P+  + +   ++E   +P +  Y  L+       R +    ++ ++ 
Sbjct: 124 TKLIKGFFTLRNVPKAVRVM--EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMR 181

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
                PD++ +N +I +    G ++ A+    ++      PT  TY  LI+   + G  +
Sbjct: 182 SKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVD 241

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           E++KLLD M   G +KP++ TYN ++R  C E  +  A+ ++  +   G +PDV++YN +
Sbjct: 242 EALKLLDEMLSRG-LKPDMFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNIL 300

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             A    G+ ++ E+++ +M      PN  T  I+I+  C++GKI+EA+   + MKE G+
Sbjct: 301 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 360

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P+   ++ LI  F      D   E L  M      PD++ Y+T++      G  D+  E
Sbjct: 361 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 420

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           IF  +G+ G  P++ +Y+ +        +  +A  +++ M+ +G  P+ + + ++IS  C
Sbjct: 421 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLC 480

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +G +D+A E+   M      P++ T+  ++ G+ +A +   A ++L  M   G  P ++
Sbjct: 481 REGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNET 540

Query: 495 TFLLLAEARRATGLTKEA 512
           T+ +L E     G   EA
Sbjct: 541 TYTVLIEGIGFAGYRAEA 558



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 205/399 (51%), Gaps = 3/399 (0%)

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           S+H + + V + G +PD I    +I  F    N+ +A+     +++ G  P    YN LI
Sbjct: 104 SLHLLETMVRK-GYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFAYNALI 161

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G+    + +++ ++LD M R  +  P+  TYN+++ + C+   +  A  V+ ++ +   
Sbjct: 162 NGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNC 220

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           +P V+TY  +  A    G  D+A +++ EM   G++P+  T   II G CKEG +  A  
Sbjct: 221 QPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 280

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
             R ++  G  P+++ +N+L++  +     +  ++++  M   + +P+V+TYS ++    
Sbjct: 281 MIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 340

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G +++   +   M + G+ PDA++Y  L   + RE   + A E L TMI  G  P++V
Sbjct: 341 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 400

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            + T+++  C +G  D+A+E+F K+ E G SPN  ++ T+      +    RA  ++  M
Sbjct: 401 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 460

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            + G+ P + T+  +       G+  +A  +L  +++ E
Sbjct: 461 VSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCE 499



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 158/332 (47%), Gaps = 2/332 (0%)

Query: 67  ESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           ++C+ TV + T L+ + +  G   EA  + + ++  G KP + TY T++  +  +   + 
Sbjct: 218 DNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 277

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              ++  +E  G +PD I +N ++ A    G  EE      KM      P   TY+ LI 
Sbjct: 278 AFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 337

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
                GK EE++ LL LM  +G + P+  +Y+ L+ A+C E  +  A   +  M + G  
Sbjct: 338 TLCRDGKIEEAMNLLKLMKEKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 396

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PD+V YNT+     +NG+ADQA E+  ++   G  PN  +   + S     G    AL  
Sbjct: 397 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 456

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              M   G+ P+ + +N +I         D   E+L  M+    +P V+TY+ ++  +  
Sbjct: 457 ILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCK 516

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           A  ++   ++ D M   G +P+   Y++L +G
Sbjct: 517 AHRIEDAIDVLDSMVGNGCRPNETTYTVLIEG 548



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/325 (22%), Positives = 146/325 (44%), Gaps = 17/325 (5%)

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
            ++G   ++  ++  M   G  P+   C  +I G+     + +A+R    ++++G  P++
Sbjct: 96  CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDV 154

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
             +N LI GF ++   D    VL  M+    +PD +TY+ ++ +  + G +D   ++ D 
Sbjct: 155 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQ 214

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           +     +P    Y+IL +  + E   ++A +LL  M+  G  P++  + TII G C +G 
Sbjct: 215 LLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGM 274

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +DRA E+   +   G  P++ ++  L+       +    E+++  M +    P   T+ +
Sbjct: 275 VDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 334

Query: 499 LAEARRATGLTKEAKRILSKIKNKERTNEM------------EAEEDIPVESLERLYHKE 546
           L       G  +EA  +L  +K K  T +             E   D+ +E LE +    
Sbjct: 335 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETM---- 390

Query: 547 ATTASYPNLLQIPNVVSSDQKGSAA 571
            +    P+++    V+++  K   A
Sbjct: 391 ISDGCLPDIVNYNTVLATLCKNGKA 415



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 45/189 (23%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIMSQVEEN 136
           ++ +L + GK  +A  IF  L E G  P+  +Y T+ +AL +   +  ++H I+  V  N
Sbjct: 405 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMVS-N 463

Query: 137 GMDPDSIFFNAVIN-----------------------------------AFSESGNMEEA 161
           G+DPD I +N++I+                                    F ++  +E+A
Sbjct: 464 GIDPDEITYNSMISCLCREGMVDKAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 523

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR-----EGNVKPNLRTY 216
           +D    M  +G  P  +TY  LI+G G AG   E+++L + + R     E + K   RT+
Sbjct: 524 IDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRINAISEYSFKRLHRTF 583

Query: 217 ---NVLVRA 222
              NVL R+
Sbjct: 584 PLLNVLQRS 592


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 220/454 (48%), Gaps = 11/454 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + GK  +A  + + + + G  P +  +  ++  L    RF         V    
Sbjct: 36  LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTK 95

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIAGKPEES 196
             PD I FN +++A  +SG +EEA   F  M  S    P   TY T+I G    GK + +
Sbjct: 96  CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRA 155

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++LLDLM+  G   PN+ TY+VLV   C      + + ++ +M   G +PDV+ YNT+  
Sbjct: 156 IELLDLMNETGCC-PNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLN 214

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              ++   D+A E++  M  +G  P   T   ++  +C+  ++  A R  + M E G  P
Sbjct: 215 GLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPP 274

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA----WSTAGF--MD 370
           +++ +N +I G       D    +L  M   R  PDVITYSTI++     W       ++
Sbjct: 275 DVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLE 334

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              EI + M + G  P+A  Y+++ +G  R ++ ++A  LL  MI+S   P++  F+ +I
Sbjct: 335 AACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVI 394

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM-KAFGV 489
              C    +D A ++F  M E    PN   +  L+ G S+  +  +A  + ++M ++F  
Sbjct: 395 GSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF-- 452

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            P  +T+  + +     G  +EA R++  + +KE
Sbjct: 453 RPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKE 486



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 201/418 (48%), Gaps = 9/418 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           L+++L++ G+ +EA  IF ++       P++VTYTT++  L    + +    ++  + E 
Sbjct: 106 LVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNET 165

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  P+ I ++ ++    ++G  ++      +M   G  P    YNTL+ G   + + +E+
Sbjct: 166 GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEA 225

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++L+ LM R G   P + TYN L+  +C  K +  A+ ++  M+  G  PDV+ YNT+  
Sbjct: 226 LELVQLMIRSG-CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIA 284

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG------KIKEALRFARTMK 310
              ++   D A+ ++ +M      P+  T   II G CK+       K++ A      MK
Sbjct: 285 GLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMK 344

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G  PN   + ++I+G            +L  M +  V PD+ ++S ++ +   +  +D
Sbjct: 345 QTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLD 404

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              +IF  M +   KP+  AY+ L  G  +  E +KA  +   M+ES F P V  + +++
Sbjct: 405 AAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVL 463

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
            G C  G ++ A+ + + M      P+  ++  L+ G         A E+ Q ++A G
Sbjct: 464 DGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKG 521



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 197/400 (49%), Gaps = 8/400 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T ++N L + GK   A  + + + E G  P+++TY+ L+  L    R +   +++ 
Sbjct: 136 VVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQ 195

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  PD I +N ++N   +S  ++EA++    M  SG  PT  TYN+L++ +  + 
Sbjct: 196 EMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSK 255

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + + +L+ +MS  G   P++  YN ++   C +  + +A  ++ +M A+   PDV+TY
Sbjct: 256 QVDRAFRLIQVMSERG-CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITY 314

Query: 252 NTIATAYAQNGEAD------QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           +TI     ++   D       A E++  M+  G  PN  T  ++I G C+  K ++AL  
Sbjct: 315 STIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALAL 374

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
            R M +  V P+L  F+++I    +  D D   ++  +M E    P+ + Y+ +++  S 
Sbjct: 375 LRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSK 434

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G +DK   +F+ M ++  +P    Y+ +  G       E+A  ++  MI     P+   
Sbjct: 435 GGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGAS 493

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +  +I G C    ++ A E+F  +   G +  +  +  L+
Sbjct: 494 YGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 121/267 (45%), Gaps = 8/267 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   LM       +   A  +   + E G  P ++ Y T++A L    R +   +++
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGN------MEEAMDTFWKMKESGLTPTTSTYNTLI 184
            Q+      PD I ++ +I+   +         +E A +    MK++G  P   TY  +I
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           +G   A K ++++ LL  M  +  V P+L ++++++ + C   ++  A+ +   M+    
Sbjct: 360 EGLCRARKSQQALALLRRMI-DSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           KP+ V Y  +    ++ GE D+A  V  E+     +P   T   ++ G C  G+I+EA+R
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVR 477

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEI 331
               M      P+   +  LI+G   +
Sbjct: 478 MVEGMIHKECFPDGASYGALIRGLCRV 504



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 97/206 (47%), Gaps = 2/206 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L    K Q+A A+   +I+    P L +++ ++ +L      ++ + I   + E  
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + + A+I+  S+ G +++A+  F  M ES   P  +TYN+++ G    G+ EE+V
Sbjct: 418 CKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAV 476

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++++ M  +    P+  +Y  L+R  C    + EA+ +   + A G   +V  YN +   
Sbjct: 477 RMVEGMIHK-ECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNE 535

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNG 283
             +      A  V  ++   G +  G
Sbjct: 536 LCKKKRLSDAHGVANKLIEAGYKQQG 561



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 2/182 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ++ E    + S + ++ SL +      A  IF  + E   KP+ V Y  L+  L+     
Sbjct: 379 IDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEV 438

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +   + E+   P    +N+V++     G +EEA+     M      P  ++Y  L
Sbjct: 439 DKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGAL 497

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I+G       EE+ +L   +  +G     +  YNVLV   C +K +++A  V +K+  +G
Sbjct: 498 IRGLCRVSCVEEAYELFQAVEAKG-FAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556

Query: 244 MK 245
            K
Sbjct: 557 YK 558


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 211/427 (49%), Gaps = 12/427 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++  L +RG+  EA ++ ++++  G +PS+VTYT LL A+     F     ++ ++
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P+ + +N +IN     G +++A +   ++   G  P T +Y T++KG   A + 
Sbjct: 207 RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW 266

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E+  +L   M  E N  PN  T+++LVR +C    +  A  V+ +M+  G   +    N 
Sbjct: 267 EDVEELFAEMM-EKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G  D A + +  M   G  P+  +   ++ G C+  + ++A    + M    
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDE----VLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
             PN V FN     F+ I+ + G+ E    ++  M E     +++TY+ ++N +   G +
Sbjct: 386 CPPNEVTFN----TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 441

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D   E+F  M     KP+   Y+ L  G    +  + A ELL  M++    PNVV F  +
Sbjct: 442 DSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVL 498

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           +S +C  G MD AIE+ ++M EHG +PNL T+ TL+ G ++      A E+L  + + GV
Sbjct: 499 VSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGV 558

Query: 490 HPQKSTF 496
            P   T+
Sbjct: 559 SPDIVTY 565



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 213/437 (48%), Gaps = 6/437 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + T L+ ++ +     +A  + + +   G  P++VTY  ++  +  + R +     +
Sbjct: 179 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++   G  PD++ +  V+     +   E+  + F +M E    P   T++ L++ +   
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 298

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E ++++L+ MS  G    N    N+++   C +  + +A+  ++ M + G  PD ++
Sbjct: 299 GMVERAIQVLEQMSGHG-CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 357

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+     +    + A+E++ EM      PN  T    I   C++G I++A      M 
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E+G   N+V +N L+ GF  +  R  VD  L L       P+ ITY+T++     A  +D
Sbjct: 418 EHGCEVNIVTYNALVNGFC-VQGR--VDSALELFYSMPCKPNTITYTTLLTGLCNAERLD 474

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              E+  +M +    P+   +++L   + ++   ++A EL+  M+E G  PN++ + T++
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G   D + + A+E+   +  +GVSP++ T+ +++   S   +   A ++  I++  G+ 
Sbjct: 535 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMR 594

Query: 491 PQKSTF--LLLAEARRA 505
           P+   +  +LLA  +R 
Sbjct: 595 PKAVIYNKILLALCKRC 611



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 216/455 (47%), Gaps = 4/455 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N +   G+  +A+   N L   G +P  V+YTT+L  L   KR+  +  + +++ E  
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + F+ ++  F   G +E A+    +M   G    T+  N +I      G+ +++ 
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 340

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           + L+ M   G   P+  +Y  +++  C  +   +A  ++ +M      P+ VT+NT    
Sbjct: 341 QFLNNMGSYG-CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 399

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             Q G  +QA  +I +M  +G + N  T   +++G+C +G++  AL    +M      PN
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPN 456

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +  L+ G       D   E+LA M +    P+V+T++ +++ +   G MD+  E+ +
Sbjct: 457 TITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVE 516

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + G  P+   Y+ L  G  ++   E+A ELL  ++ +G  P++V +++II     + 
Sbjct: 517 QMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSRED 576

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ AI++F  + + G+ P    +  ++    +      A +    M + G  P + T++
Sbjct: 577 RVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYI 636

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
            L E        KE + +L ++ ++   N+   EE
Sbjct: 637 TLIEGLANEDFLKETRDLLRELCSRGVLNKNLLEE 671



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 176/406 (43%), Gaps = 42/406 (10%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++ +    G  PD      +I      G   +A       + SG       YNTL+ GY 
Sbjct: 65  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 124

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G+ + + +L+  M     V P+  TY  ++R  C+   + EA +++  M   G +P V
Sbjct: 125 RYGQLDAARRLIASMP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 180

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTY  +  A  ++    QA EV+ EM   G  PN  T  +II+G C+EG++ +A  F   
Sbjct: 181 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 240

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           +  YG  P+ V +  ++KG       + V+E+ A M E    P+ +T+  ++  +   G 
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 300

Query: 369 MDK---------------------------CK--------EIFDDMGKAGIKPDAHAYSI 393
           +++                           CK        +  ++MG  G  PD  +Y+ 
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           + KG  R +  E A+ELL  M+     PN V F T I   C  G +++A  + ++M EHG
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
              N+ T+  L+ G+       R +  L++  +    P   T+  L
Sbjct: 421 CEVNIVTYNALVNGFC---VQGRVDSALELFYSMPCKPNTITYTTL 463



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 83/181 (45%), Gaps = 1/181 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           + K+    V +   L++   ++G   EA  +   ++E G  P+L+TY TLL  +T     
Sbjct: 484 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS 543

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                ++  +  NG+ PD + ++++I   S    +EEA+  F  +++ G+ P    YN +
Sbjct: 544 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 603

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           +         + ++     M   G   PN  TY  L+    NE  + E  +++ ++ + G
Sbjct: 604 LLALCKRCNTDGAIDFFAYMVSNG-CMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662

Query: 244 M 244
           +
Sbjct: 663 V 663


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 216/419 (51%), Gaps = 1/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N+   RG+  +A A FN +IE G  P++VT+ T++ A   +        +   ++E G
Sbjct: 97  VINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMG 156

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P++I +N ++N + +   +++A   + +M++ G+ P   T+N L+ G+   G+ E+  
Sbjct: 157 FSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGD 216

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL  +S  G + P+   +++ V   C    + EA   +  M   G+ P ++ +N++  A
Sbjct: 217 RLLKDISVLG-LLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAA 275

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y+Q G  D+A E    M H G+ P+  TC  ++ G    G+++EA      M E G+  N
Sbjct: 276 YSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVN 335

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + F +L+  F +  D  G   +   M+   + PDV+ +S  ++  S  G +++   +F 
Sbjct: 336 NMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFL 395

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M + G+ P+  AY+ L  G+ +  +  +A +L   M   G  P++     II G C  G
Sbjct: 396 EMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQG 455

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            M  AI VF  M + G+SP++ T+ TL+ GY +A     A+ ++  M A G +P  +T+
Sbjct: 456 RMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTY 514



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 104/418 (24%), Positives = 198/418 (47%), Gaps = 1/418 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L   L+  G       +F ++I  G +P   T++ ++     +   +   S++  + +  
Sbjct: 27  LFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFH 86

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            +P++  +N VINA    G   +A+  F  M E G  PT  T+NT+I  +   G   E+ 
Sbjct: 87  CEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEAR 146

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL D + +E    PN   YN L+  +   + I +A  +  +M   G+ PD +T+N + + 
Sbjct: 147 KLFDGL-KEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSG 205

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G  +  + ++ ++   G+ P+     I +SG C  G++ EA+ F   M E G+ P+
Sbjct: 206 HYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPS 265

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ FN +I  + +    D   E   LM  F + P   T S+++   S  G + +  E+  
Sbjct: 266 IIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIG 325

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + G+  +  A+++L   + +  +   A+ L   M   G  P+VV F+  I G    G
Sbjct: 326 QMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQG 385

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            ++ A  VF +M   G+ PN   + +L+ G+ +  +   A ++ ++M+  G+ P   T
Sbjct: 386 LVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFT 443



 Score =  152 bits (383), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 170/369 (46%), Gaps = 36/369 (9%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+ ++   +  ++   G  P    +   ++ L    R +     +  + E G+ P  I F
Sbjct: 210 GREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAF 269

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N+VI A+S++G  ++A + +  M   GLTP+ ST ++L+ G  I G+ +E+ +L+  M  
Sbjct: 270 NSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIE 329

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G +  N   + VL+  +    ++  A ++  +M   G+ PDVV ++      ++ G  +
Sbjct: 330 KG-LSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVE 388

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  V +EM   G+ PN      +I G+CK GK+ EAL+  + M+  G+ P         
Sbjct: 389 EAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLP--------- 439

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                                     D+ T + I+      G M     +F DM + G+ 
Sbjct: 440 --------------------------DIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLS 473

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   Y+ L  GY +  +   A+ L+  M  SG +P++  +   I G+CS   M+RA+ +
Sbjct: 474 PDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLM 533

Query: 446 FDKMCEHGV 454
            D++   G+
Sbjct: 534 LDELVSAGI 542



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 108/245 (44%), Gaps = 34/245 (13%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L+  L   G+ QEA  +   +IE G   + + +T LL     +       S+  ++E 
Sbjct: 305 SSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMER 364

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ PD + F+A I+  S+ G +EEA + F +M   GL P    YN+LI G+   GK  E
Sbjct: 365 RGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNE 424

Query: 196 SVKLLDLMSREG----------------------------------NVKPNLRTYNVLVR 221
           ++KL  +M   G                                   + P++ TYN L+ 
Sbjct: 425 ALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLIN 484

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
            +C   ++  A N++++M ASG  PD+ TYN     +  +   ++A  ++ E+   G+  
Sbjct: 485 GYCKAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGILS 544

Query: 282 NGRTC 286
               C
Sbjct: 545 FSFAC 549



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 44/173 (25%), Positives = 86/173 (49%), Gaps = 1/173 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + +  ++ L ++G  +EA  +F  ++  G  P+   Y +L+       + N    +  
Sbjct: 371 VVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEK 430

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ PD    N +I    + G M  A++ F  M ++GL+P   TYNTLI GY  A 
Sbjct: 431 VMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAF 490

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
               +  L++ M   G+  P+L TYN+ +  +C+ + +  A  ++ ++ ++G+
Sbjct: 491 DMVNADNLVNRMYASGS-NPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGI 542


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 232/477 (48%), Gaps = 47/477 (9%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS------- 131
           +++ +  GKP  A  IF  +I    KP+L+T  TLL  L    R+ S  SI S       
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLV---RYPSSFSISSAREVFDD 194

Query: 132 -----------------------------------QVEENGMDPDSIFFNAVINAFSESG 156
                                               V E  ++PD++ +N ++ A S+ G
Sbjct: 195 MVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKG 254

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            + +  +    MK++GL P   TYN L+ GY   G  +E+ ++++LM ++ NV P+L TY
Sbjct: 255 RLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELM-KQTNVLPDLCTY 313

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N+L+   CN  ++ E   +M  M +  ++PDVVTYNT+     + G + +A +++ +ME+
Sbjct: 314 NILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMEN 373

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE-YGVHPNLVIFNLLIKGFVEIMDRD 335
           +GV+ N  T  I +   CKE K +   R  + + + +G  P++V ++ LIK ++++ D  
Sbjct: 374 DGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLS 433

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
           G  E++  M +  +  + IT +TI++A      +D+   + +   K G   D   Y  L 
Sbjct: 434 GALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLI 493

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G+ RE++ EKA E+   M +    P V  F ++I G C  G  + A+E FD++ E G+ 
Sbjct: 494 MGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLL 553

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           P+  TF +++ GY +  +  +A E           P   T  +L       G+T++A
Sbjct: 554 PDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKA 610



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 124/504 (24%), Positives = 237/504 (47%), Gaps = 45/504 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           V++   L+N     GK ++A  +   ++ E    P  VTY T+L A++ + R + +  ++
Sbjct: 204 VQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLSDLKELL 263

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +++NG+ P+ + +N ++  + + G+++EA      MK++ + P   TYN LI G   A
Sbjct: 264 LDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILINGLCNA 323

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT-EAWNVMHKMAASGMK---- 245
           G   E ++L+D M +   ++P++ TYN L+   C E  ++ EA  +M +M   G+K    
Sbjct: 324 GSMREGLELMDAM-KSLKLQPDVVTYNTLIDG-CFELGLSLEARKLMEQMENDGVKANQV 381

Query: 246 --------------------------------PDVVTYNTIATAYAQNGEADQAEEVIVE 273
                                           PD+VTY+T+  AY + G+   A E++ E
Sbjct: 382 THNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALEMMRE 441

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M   G++ N  T   I+   CKE K+ EA     +  + G   + V +  LI GF     
Sbjct: 442 MGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFFREEK 501

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            +   E+   MK+ ++ P V T+++++      G  +   E FD++ ++G+ PD   ++ 
Sbjct: 502 VEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDSTFNS 561

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           +  GY +E   EKA E     I+  F P+      +++G C +G  ++A+  F+ + E  
Sbjct: 562 IILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFNTLIEER 621

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
               + T+ T++  + + ++   A ++L  M+  G+ P + T+          G   E  
Sbjct: 622 EVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLMEDGKLSETD 680

Query: 514 RILSKIKNK----ERTNEMEAEED 533
            +L K   K    +R  ++E E++
Sbjct: 681 ELLKKFSGKFGSMKRDLQVETEKN 704



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 71/254 (27%), Positives = 128/254 (50%), Gaps = 4/254 (1%)

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG---YCKEGKIKEA 302
           P    ++   +AY   G+   A ++  +M    ++PN  TC  ++ G   Y     I  A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGF-VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
                 M + GV  N+  FN+L+ G+ +E    D +  +  ++ EF+VNPD +TY+TI+ 
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
           A S  G +   KE+  DM K G+ P+   Y+ L  GY +    ++A +++  M ++   P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           ++  +  +I+G C+ GSM   +E+ D M    + P++ T+ TL+ G  E      A +++
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368

Query: 482 QIMKAFGVHPQKST 495
           + M+  GV   + T
Sbjct: 369 EQMENDGVKANQVT 382



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 139/296 (46%), Gaps = 9/296 (3%)

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
           H    P+     I +S Y  EGK   AL+  + M    + PNL+  N L+ G V      
Sbjct: 124 HLSPPPSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSF 183

Query: 336 GVD---EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM-GKAGIKPDAHAY 391
            +    EV   M +  V+ +V T++ ++N +   G ++    + + M  +  + PD   Y
Sbjct: 184 SISSAREVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTY 243

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + + K   ++      +ELL+ M ++G  PN V +  ++ G+C  GS+  A ++ + M +
Sbjct: 244 NTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQ 303

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
             V P+L T+  L+ G   A       E++  MK+  + P   T+  L +     GL+ E
Sbjct: 304 TNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLE 363

Query: 512 AKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQI----PNVVS 563
           A++++ +++N +     +   +I ++ L +   +EA T     L+ +    P++V+
Sbjct: 364 ARKLMEQMEN-DGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVT 418



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 89/201 (44%), Gaps = 37/201 (18%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+  L   GK + A   F+ L E                              
Sbjct: 520 TVSTFNSLIGGLCHHGKTELAMEKFDELAE------------------------------ 549

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
                +G+ PD   FN++I  + + G +E+A + + +  +    P   T N L+ G    
Sbjct: 550 -----SGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKE 604

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E+++   + +  E  V  +  TYN ++ A+C +K + EA++++ +M   G++PD  T
Sbjct: 605 GMTEKALNFFNTLIEEREV--DTVTYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFT 662

Query: 251 YNTIATAYAQNGEADQAEEVI 271
           YN+  +   ++G+  + +E++
Sbjct: 663 YNSFISLLMEDGKLSETDELL 683


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 220/454 (48%), Gaps = 11/454 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + GK  +A  + + + + G  P +  +  ++  L    RF         V    
Sbjct: 36  LIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTK 95

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIAGKPEES 196
             PD I FN +++A  +SG +EEA   F  M  S    P   TY T+I G    GK + +
Sbjct: 96  CTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRA 155

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++LLDLM+  G   PN+ TY+VLV   C      + + ++ +M   G +PDV+ YNT+  
Sbjct: 156 IELLDLMNETGCC-PNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLN 214

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              ++   D+A E++  M  +G  P   T   ++  +C+  ++  A R  + M E G  P
Sbjct: 215 GLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPP 274

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA----WSTAGF--MD 370
           +++ +N +I G       D    +L  M   R  PDVITYSTI++     W       ++
Sbjct: 275 DVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLE 334

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              EI + M + G  P+A  Y+++ +G  R ++ ++A  LL  MI+S   P++  F+ +I
Sbjct: 335 AACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVI 394

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM-KAFGV 489
              C    +D A ++F  M E    PN   +  L+ G S+  +  +A  + ++M ++F  
Sbjct: 395 GSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVESF-- 452

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            P  +T+  + +     G  +EA R++  + +KE
Sbjct: 453 RPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKE 486



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 201/418 (48%), Gaps = 9/418 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           L+++L++ G+ +EA  IF ++       P++VTYTT++  L    + +    ++  + E 
Sbjct: 106 LVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNET 165

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  P+ I ++ ++    ++G  ++      +M   G  P    YNTL+ G   + + +E+
Sbjct: 166 GCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEA 225

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++L+ LM R G   P + TYN L+  +C  K +  A+ ++  M+  G  PDV+ YNT+  
Sbjct: 226 LELVQLMIRSG-CYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIA 284

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG------KIKEALRFARTMK 310
              ++   D A+ ++ +M      P+  T   II G CK+       K++ A      MK
Sbjct: 285 GLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMK 344

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G  PN   + ++I+G            +L  M +  V PD+ ++S ++ +   +  +D
Sbjct: 345 QTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLD 404

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              +IF  M +   KP+  AY+ L  G  +  E +KA  +   M+ES F P V  + +++
Sbjct: 405 AAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVL 463

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
            G C  G ++ A+ + + M      P+  ++  L+ G         A E+ Q ++A G
Sbjct: 464 DGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKG 521



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 197/400 (49%), Gaps = 8/400 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T ++N L + GK   A  + + + E G  P+++TY+ L+  L    R +   +++ 
Sbjct: 136 VVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQ 195

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  PD I +N ++N   +S  ++EA++    M  SG  PT  TYN+L++ +  + 
Sbjct: 196 EMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSK 255

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + + +L+ +MS  G   P++  YN ++   C +  + +A  ++ +M A+   PDV+TY
Sbjct: 256 QVDRAFRLIQVMSERG-CPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITY 314

Query: 252 NTIATAYAQNGEAD------QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           +TI     ++   D       A E++  M+  G  PN  T  ++I G C+  K ++AL  
Sbjct: 315 STIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALAL 374

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
            R M +  V P+L  F+++I    +  D D   ++  +M E    P+ + Y+ +++  S 
Sbjct: 375 LRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSK 434

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G +DK   +F+ M ++  +P    Y+ +  G       E+A  ++  MI     P+   
Sbjct: 435 GGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGAS 493

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +  +I G C    ++ A E+F  +   G +  +  +  L+
Sbjct: 494 YGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLV 533



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 121/267 (45%), Gaps = 8/267 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   LM       +   A  +   + E G  P ++ Y T++A L    R +   +++
Sbjct: 240 TVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALL 299

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGN------MEEAMDTFWKMKESGLTPTTSTYNTLI 184
            Q+      PD I ++ +I+   +         +E A +    MK++G  P   TY  +I
Sbjct: 300 KQMVAARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVI 359

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           +G   A K ++++ LL  M  +  V P+L ++++++ + C   ++  A+ +   M+    
Sbjct: 360 EGLCRARKSQQALALLRRMI-DSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSEREC 418

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           KP+ V Y  +    ++ GE D+A  V  E+     +P   T   ++ G C  G+I+EA+R
Sbjct: 419 KPNPVAYAALIDGLSKGGEVDKAVRVF-ELMVESFRPGVATYNSVLDGLCGVGRIEEAVR 477

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEI 331
               M      P+   +  LI+G   +
Sbjct: 478 MVEGMIHKECFPDGASYGALIRGLCRV 504



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/206 (22%), Positives = 97/206 (47%), Gaps = 2/206 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L    K Q+A A+   +I+    P L +++ ++ +L      ++ + I   + E  
Sbjct: 358 VIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERE 417

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + + A+I+  S+ G +++A+  F  M ES   P  +TYN+++ G    G+ EE+V
Sbjct: 418 CKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAV 476

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++++ M  +    P+  +Y  L+R  C    + EA+ +   + A G   +V  YN +   
Sbjct: 477 RMVEGMIHK-ECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNE 535

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNG 283
             +      A  V  ++   G +  G
Sbjct: 536 LCKKKRLSDAHGVANKLIEAGYKQQG 561



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 44/182 (24%), Positives = 80/182 (43%), Gaps = 2/182 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ++ E    + S + ++ SL +      A  IF  + E   KP+ V Y  L+  L+     
Sbjct: 379 IDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEV 438

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +   + E+   P    +N+V++     G +EEA+     M      P  ++Y  L
Sbjct: 439 DKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGAL 497

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I+G       EE+ +L   +  +G     +  YNVLV   C +K +++A  V +K+  +G
Sbjct: 498 IRGLCRVSCVEEAYELFQAVEAKG-FAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAG 556

Query: 244 MK 245
            K
Sbjct: 557 YK 558


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 213/410 (51%), Gaps = 3/410 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   ++N     G+  +A  +F  +++ G +P++VTYTT++  L   +  +    +  
Sbjct: 203 VVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQ 262

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G+ PD+  +N +I+ +   G  +E +    +M   GL P   TY +L+      G
Sbjct: 263 QMIDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNG 322

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  L D M R+G +KPN+  Y +L+  +  +  ++E  ++++ M  +G+ PD   +
Sbjct: 323 RCREARFLFDSMIRKG-IKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIF 381

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRFARTMK 310
           N I TAYA+    D+A  +  +M+  G+ P+    G +I   CK G++ +A L+F + M 
Sbjct: 382 NIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMN 441

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E GV PN+ +FN L+ G   +   +   E    M    + PDV+ ++TI+    T G + 
Sbjct: 442 E-GVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVM 500

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K + + D M + G +P   +Y+ L  G+      ++A + L  M+  G  P+   + T++
Sbjct: 501 KAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLL 560

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
            G+C  G +D A  VF +M  +G++P + T+ T++ G    R+   A+E+
Sbjct: 561 HGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKEL 610



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 211/450 (46%), Gaps = 7/450 (1%)

Query: 75  MTKLMNSLIERGKPQEAQAIF-NNLIEGGHKPSLVTYTTLLAALTIQKR----FNSIHSI 129
           + +L+  L +  +  EA  I    + E G  P +V+Y TLL     +KR       +H +
Sbjct: 132 INQLLKGLCDAKRLCEAMDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLH-M 190

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           M+  +     P+ + +  VIN F   G +++A + F +M + G+ P   TY T+I G   
Sbjct: 191 MADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCK 250

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           A   + +  +   M  +G VKP+  TYN L+  + +     E   ++ +M+A G+KPD  
Sbjct: 251 AQVVDRAEGVFQQMIDKG-VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCY 309

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY ++      NG   +A  +   M   G++PN    GI+I GY  +G + E       M
Sbjct: 310 TYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLM 369

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            E G+ P+  IFN++   + +    D    +   MK+  ++PDV+ Y  +++A    G +
Sbjct: 370 VENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRV 429

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D     F+ M   G+ P+   ++ L  G     + EKA+E    M+  G  P+VV F TI
Sbjct: 430 DDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTI 489

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           +   C+ G + +A  + D M   G  P + ++ TL+ G+    +   A + L +M + G+
Sbjct: 490 LCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGL 549

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            P + T+  L       G   +A  +  ++
Sbjct: 550 KPDEWTYNTLLHGYCRAGRIDDAYGVFREM 579



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 190/392 (48%), Gaps = 9/392 (2%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL + L+   +P    A FN+L+    + S    +T  + L +     S+ + M +    
Sbjct: 35  KLFDGLLTHARPASVIA-FNHLLTAVSRVSGRRSSTTESELVV-----SLFNRMIRECTI 88

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            + PD   ++ +I  F   G +E    TF  + +SG        N L+KG   A +  E+
Sbjct: 89  KVTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEA 148

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK---PDVVTYNT 253
           + +L     E    P++ +YN L++ +CNEK   EA  ++H MA S  +   P+VV+Y  
Sbjct: 149 MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAI 208

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +   G+ D+A  + +EM   G+QPN  T   +I G CK   +  A    + M + G
Sbjct: 209 VINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKG 268

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V P+   +N LI G++ I     V  +L  M    + PD  TY +++N     G   + +
Sbjct: 269 VKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREAR 328

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +FD M + GIKP+   Y IL  GY  +    +  +LL  M+E+G  P+  IF  I + +
Sbjct: 329 FLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAY 388

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
                +D A+ +F+KM + G+SP++  +  L+
Sbjct: 389 AKKAMIDEAMHIFNKMKQQGLSPDVVNYGALI 420



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 173/382 (45%), Gaps = 11/382 (2%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            EA  IFN + + G  P +V Y  L+ AL    R +      +Q+   G+ P+   FN++
Sbjct: 395 DEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSL 454

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           +         E+A + +++M   G+ P    +NT++      G+  ++ +L+DLM R G 
Sbjct: 455 VYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGT 514

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            +P + +Y  L+   C    I EA   +  M + G+KPD  TYNT+   Y + G  D A 
Sbjct: 515 -RPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAY 573

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            V  EM  NG+ P   T   I+ G     +  EA      M   G   N+ I+N+++ G 
Sbjct: 574 GVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGL 633

Query: 329 VEIMDRDGVDEVLALM-----KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
            +    + VDE   L      K+F++  ++ T++ ++ A   +G  +    +F  +   G
Sbjct: 634 SK---NNCVDEAFKLFQSLCSKDFQL--EITTFNIMIGALFKSGRNEDAMHLFATISSYG 688

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           + PD   Y ++A+  + E   E+ ++L   M +SG  PN  +   ++      G + RA 
Sbjct: 689 LVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVRRLLHRGDITRAG 748

Query: 444 EVFDKMCEHGVSPNLKTFETLM 465
               K+ E   S    T   L+
Sbjct: 749 AYLCKLDEKNFSLEASTTAMLI 770



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 93/358 (25%), Positives = 166/358 (46%), Gaps = 13/358 (3%)

Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA 232
           +TP   TY+ LI  +   G+ E       L+ + G    N+   N L++  C+ K + EA
Sbjct: 90  VTPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNI-VINQLLKGLCDAKRLCEA 148

Query: 233 WNVMHK-MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC----- 286
            +++ K M   G  PDVV+YNT+   +     A++A    +E+ H      GR+C     
Sbjct: 149 MDILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEA----LELLHMMADSQGRSCPPNVV 204

Query: 287 --GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
              I+I+G+  EG++ +A      M + G+ PN+V +  +I G  +    D  + V   M
Sbjct: 205 SYAIVINGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQM 264

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            +  V PD  TY+ +++ + + G   +   + ++M   G+KPD + Y  L          
Sbjct: 265 IDKGVKPDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRC 324

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            +A  L  +MI  G  PNV I+  +I G+ + G++    ++ + M E+G+SP+   F  +
Sbjct: 325 REARFLFDSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNII 384

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              Y++      A  I   MK  G+ P    +  L +A    G   +A    +++ N+
Sbjct: 385 FTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNE 442



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 162/342 (47%), Gaps = 1/342 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++L + G+  +A   FN ++  G  P++  + +L+  L    ++        ++   G
Sbjct: 419 LIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQG 478

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD +FFN ++      G + +A      M+  G  P   +Y TLI G+ + G+ +E+ 
Sbjct: 479 IRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAA 538

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K LD+M   G +KP+  TYN L+  +C    I +A+ V  +M  +G+ P VVTY+TI   
Sbjct: 539 KSLDVMLSVG-LKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHG 597

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                   +A+E+ + M  +G Q N     II++G  K   + EA +  +++        
Sbjct: 598 LFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLE 657

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  FN++I    +    +    + A +  + + PDV TY  I       G++++  ++F 
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFS 717

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
            M K+G  P++   + L +  +   +  +A   L  + E  F
Sbjct: 718 AMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNF 759



 Score = 42.4 bits (98), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 24/113 (21%), Positives = 49/113 (43%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   ++ +L + G+ ++A  +F  +   G  P + TY  +   L  +        + S
Sbjct: 658 ITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFS 717

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
            +E++G  P+S   NA++      G++  A     K+ E   +   ST   LI
Sbjct: 718 AMEKSGTTPNSRMLNALVRRLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLI 770


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/431 (27%), Positives = 215/431 (49%), Gaps = 13/431 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+N+    GK +E + +  ++ E G  P+LVTY+ ++A L      +    +  
Sbjct: 232 VYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKR 291

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY---- 187
            +   G+ PD+  +  +I+ F       E      +M   GL P    Y  LI G+    
Sbjct: 292 SMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQS 351

Query: 188 --GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
             G A + +E     ++ +R+  +K N  TY  L+   C   ++ +A ++  +M   G+K
Sbjct: 352 DIGGAFQVKE-----EMFARK--IKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIK 404

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PD+ TYN +   Y +    ++A E+++E++   +  N   CG I++G C  G +  A   
Sbjct: 405 PDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANEL 464

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
            + M  +G+ PN+VI+  ++KG V+    +   ++L +MK+  ++PDV  Y+T++  +  
Sbjct: 465 FQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCK 524

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
           AG M++ K    +M   G+KP+ + Y     GY R  E + AE   + M++SG  PN VI
Sbjct: 525 AGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVI 584

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
            T +I G+C DG+  +A   F  M + GV P+++T   L+ G S+  +   A  +   + 
Sbjct: 585 CTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELL 644

Query: 486 AFGVHPQKSTF 496
             G+ P   T+
Sbjct: 645 DKGLVPDVFTY 655



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 233/480 (48%), Gaps = 37/480 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + G  ++A+ +F+ +   G KP + TY  L+      +     + ++ ++++  
Sbjct: 378 LIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKEN 437

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  ++    A++N     G++  A + F +M   GL P    Y T++KG    G+ EE++
Sbjct: 438 LTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAI 497

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+L +M  +G + P++  YN ++  +C    + E  + + +M A G+KP+V TY      
Sbjct: 498 KILGVMKDQG-LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHG 556

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + GE   AE   +EM  +G+ PN   C  +I GYCK+G   +A    R M + GV P+
Sbjct: 557 YCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPD 616

Query: 318 LVIFNLLIKG-------------FVEIMDRDGVDEVLA-------LMKE------FR--- 348
           +   ++LI G             F E++D+  V +V         L KE      F    
Sbjct: 617 VQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHD 676

Query: 349 ------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
                 +NP+++TY+ ++N     G + K +E+FD + + G+  ++  YS +  GY +  
Sbjct: 677 DMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSA 736

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
              +A +L   M   G  P+  ++  +I G C  G+ ++A+ +F  M E G++     F 
Sbjct: 737 NLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIAST-PAFN 795

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            L+ G+ +  +   A ++++ M    + P   T+ +L E     G  KEA+++  +++ +
Sbjct: 796 ALIDGFFKLGKLIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKR 855



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 201/419 (47%), Gaps = 1/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++    + +  E +++ + +   G KP  V YT L+     Q        +  ++    
Sbjct: 308 LIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARK 367

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  ++  + A+I+   + G++E+A D F +M   G+ P   TYN LI+GY      E++ 
Sbjct: 368 IKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAY 427

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL  + +E N+  N      +V   C+  ++T A  +  +M + G+KP++V Y TI   
Sbjct: 428 ELLIEIKKE-NLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKG 486

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G  ++A +++  M+  G+ P+      +I G+CK GK++E   +   M   G+ PN
Sbjct: 487 LVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPN 546

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  +   I G+    +    +     M +  + P+ +  + +++ +   G   K    F 
Sbjct: 547 VYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFR 606

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G+ PD   +S+L  G  +  + ++A  +   +++ G  P+V  +T++IS  C +G
Sbjct: 607 CMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEG 666

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            +  A E+ D MC+ G++PN+ T+  L+ G  +  +  +A E+   +   G+     T+
Sbjct: 667 DLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTY 725



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/514 (24%), Positives = 220/514 (42%), Gaps = 70/514 (13%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N L   G    A  +F  +I  G KP++V YTT++  L  + RF     I+  +++ G
Sbjct: 448 IVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG 507

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N VI  F ++G MEE      +M   GL P   TY   I GY  AG+ + + 
Sbjct: 508 LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAE 567

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +    M   G + PN      L+  +C + N T+A+     M   G+ PDV T++ +   
Sbjct: 568 RSFIEMLDSG-IAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHG 626

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            ++NG+  +A  V  E+   G+ P+  T   +IS  CKEG +K A      M + G++PN
Sbjct: 627 LSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPN 686

Query: 318 LVIFNLLIKGFVEIMD-------RDGVDE----------------------------VLA 342
           +V +N LI G  ++ +        DG+ E                            +  
Sbjct: 687 IVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFH 746

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF-------------------------- 376
            MK   V PD   Y  +++    AG  +K   +F                          
Sbjct: 747 GMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGK 806

Query: 377 --------DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
                   +DM    I P+   Y+IL + +      ++AE+L M M +    PNV+ +T+
Sbjct: 807 LIEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTS 866

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++ G+   G       +FD+M   G+ P+   +  ++  + +     +A +++  M + G
Sbjct: 867 LLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEG 926

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           V+  K+ + +L +A        E  ++L +++ +
Sbjct: 927 VNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQ 960



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 194/422 (45%), Gaps = 1/422 (0%)

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
           G   P + TYT L+ A     +      ++  +EE G  P+ + ++ VI     +G+++E
Sbjct: 226 GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDE 285

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A++    M   GL P    Y TLI G+    +  E   +LD M   G +KP+   Y  L+
Sbjct: 286 ALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMG-LKPDHVAYTALI 344

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
             +  + +I  A+ V  +M A  +K +  TY  +     + G+ ++AE++  EM   G++
Sbjct: 345 NGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIK 404

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+ +T   +I GY K   +++A      +K+  +  N  +   ++ G     D    +E+
Sbjct: 405 PDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANEL 464

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
              M  + + P+++ Y+TI+      G  ++  +I   M   G+ PD   Y+ +  G+ +
Sbjct: 465 FQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCK 524

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
             + E+ +  L+ MI  G  PNV  +   I G+C  G M  A   F +M + G++PN   
Sbjct: 525 AGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVI 584

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
              L+ GY +     +A    + M   GV P   T  +L       G  +EA  + S++ 
Sbjct: 585 CTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELL 644

Query: 521 NK 522
           +K
Sbjct: 645 DK 646



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/409 (24%), Positives = 204/409 (49%), Gaps = 2/409 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++   + G   +A A F  +++ G  P + T++ L+  L+   +      + S++ +
Sbjct: 586 TDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLD 645

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ PD   + ++I+   + G+++ A +    M + G+ P   TYN LI G    G+  +
Sbjct: 646 KGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAK 705

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +L D +  +G +  N  TY+ ++  +C   N+TEA+ + H M   G+ PD   Y  + 
Sbjct: 706 ARELFDGIPEKG-LARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALI 764

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G  ++A  + + M   G+         +I G+ K GK+ EA +    M +  + 
Sbjct: 765 DGCCKAGNTEKALSLFLGMVEEGIAST-PAFNALIDGFFKLGKLIEAYQLVEDMVDNHIT 823

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN V + +LI+    + +    +++   M++  V P+V+TY+++++ ++  G   +   +
Sbjct: 824 PNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSL 883

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           FD+M   GIKPD  A+S++   +++E    KA +L+  M+  G +    ++T +I   C 
Sbjct: 884 FDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCK 943

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
             ++   ++V D++ + G   +L T  TL+  +  A +   A  +L+ M
Sbjct: 944 HNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESM 992



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 96/347 (27%), Positives = 170/347 (48%), Gaps = 2/347 (0%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           F  +I+ + + G + EA+  F   K +      +  N+L K      + E   K+   M 
Sbjct: 166 FEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGML 225

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
             G + P++ TY  L+ A+C    + E  +V+  M   G  P++VTY+ +     + G+ 
Sbjct: 226 --GAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDV 283

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           D+A E+   M + G+ P+      +I G+C++ +  E       M   G+ P+ V +  L
Sbjct: 284 DEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTAL 343

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I GFV+  D  G  +V   M   ++  +  TY  +++     G ++K +++F +M   GI
Sbjct: 344 INGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGI 403

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           KPD   Y+ L +GY + Q  EKA ELL+ + +     N  +   I++G C  G + RA E
Sbjct: 404 KPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANE 463

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           +F +M   G+ PN+  + T++ G  +  +   A +IL +MK  G+ P
Sbjct: 464 LFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSP 510



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/326 (23%), Positives = 139/326 (42%), Gaps = 57/326 (17%)

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ-NGEADQAE-- 268
           NL T+++L    CN      A NV+ +M  +   P V   ++I   Y + NG +  +   
Sbjct: 106 NLSTFSILSLILCNSGLFGNAANVLERMIDT-RNPHVKILDSIIKCYKEINGSSSSSSVV 164

Query: 269 --EVIVEMEHN------------GVQPN----GRTC------------------------ 286
             E+++++               G + N    G  C                        
Sbjct: 165 VFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGM 224

Query: 287 -GIII----------SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
            G I+          + YC+ GK++E       M+E G  PNLV ++++I G     D D
Sbjct: 225 LGAIVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVD 284

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
              E+   M    + PD   Y+T+++ +       + K + D+M   G+KPD  AY+ L 
Sbjct: 285 EALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALI 344

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G+V++ +   A ++   M       N   +  +I G C  G +++A ++F +M   G+ 
Sbjct: 345 NGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIK 404

Query: 456 PNLKTFETLMWGYSEARQPWRAEEIL 481
           P+++T+  L+ GY + +   +A E+L
Sbjct: 405 PDIQTYNCLIEGYYKVQNMEKAYELL 430



 Score = 43.1 bits (100), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 25/134 (18%), Positives = 67/134 (50%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++     G+  E  ++F+ ++  G KP  + ++ ++ A   +  +     ++ 
Sbjct: 861 VLTYTSLLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVD 920

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G++     +  +I+A  +  N+ E +    ++++ G   + +T  TL+  +  AG
Sbjct: 921 DMLSEGVNVCKNLYTILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAG 980

Query: 192 KPEESVKLLDLMSR 205
           + +E++++L+ M R
Sbjct: 981 RTDEALRVLESMVR 994


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 235/503 (46%), Gaps = 59/503 (11%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++SL +     +A  +++ +I  G  P++VTY  L+    I        S++++++   
Sbjct: 209 IIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKN 268

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++PD   FN +I+A  + G M+ A      M ++ + P   TYN+LI GY    K + + 
Sbjct: 269 INPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAK 328

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +   M++ G V PN+RTY  ++   C EK + EA ++  +M    M PD+VTY ++   
Sbjct: 329 YVFYSMAQSG-VTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDG 387

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +N   ++A  +  +M+  G+QP+  +  I++   CK G+++ A  F + +   G H N
Sbjct: 388 LCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLN 447

Query: 318 LVIFNLLIKG------FVEIMD--------------------------RDGVDE------ 339
           +  +N++I G      F E MD                          +D  D+      
Sbjct: 448 VQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILR 507

Query: 340 --------------------VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
                               VLA+M +  + PDV+TY T+M+ +     +   K +F  M
Sbjct: 508 EMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSM 567

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            + G+ P+   Y+I+  G  +++  ++A  L   M      PN+V +T++I   C +  +
Sbjct: 568 AQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHL 627

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           +RAI +  +M EHG+ P++ ++  L+ G  ++ +   A+EI Q +   G H     +  +
Sbjct: 628 ERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAM 687

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
                  GL  EA  +  K+++K
Sbjct: 688 INELCKAGLFDEALDLQXKMEDK 710



 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 225/440 (51%), Gaps = 34/440 (7%)

Query: 80  NSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           NSLI+      K + A+ +F ++ + G  P++ TYTT++  L  +K  +   S+  +++ 
Sbjct: 312 NSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKY 371

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             M PD + + ++I+   ++ ++E A+    KMKE G+ P   +Y  L+      G+ E 
Sbjct: 372 KNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLEN 431

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +    +  +G    N++TYNV++   C      EA ++  KM   G  PD +T+ TI 
Sbjct: 432 AKEFFQRLLVKG-YHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTII 490

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQ-----------------------PNGRTCGIIISG 292
            A  +  E D+AE+++ EM   G+Q                       P+  T G ++ G
Sbjct: 491 CALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDG 550

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---V 349
           Y    ++K A     +M + GV PN+  + ++I G  +   +  VDE ++L +E +   +
Sbjct: 551 YFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCK---KKTVDEAMSLFEEMKHKNM 607

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            P+++TY+++++A      +++   +  +M + GI+PD ++Y+IL  G  +    E A+E
Sbjct: 608 FPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKE 667

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +   ++  G+H NV ++T +I+  C  G  D A+++  KM + G  P+  TF+ ++W   
Sbjct: 668 IFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALF 727

Query: 470 EARQPWRAEEILQIMKAFGV 489
           E  +  +AE+IL  M A G+
Sbjct: 728 EKDENDKAEKILXEMIARGL 747



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/432 (25%), Positives = 204/432 (47%), Gaps = 1/432 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A A F+ ++     P    +  +L++L   K + ++ S+  + E NG  PD    N ++N
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            F    ++  A      + + G  P   T NTLIKG    G+ ++++   D +  +G  +
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQG-FQ 165

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
            N  +Y  L+   C          ++ K+    +KPDVV YNTI  +  +N     A ++
Sbjct: 166 LNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDL 225

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             EM   G+ PN  T   ++ G+C  G +KEA      MK   ++P++  FN LI    +
Sbjct: 226 YSEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGK 285

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
                    VLA+M +  + PDV+TY+++++ +     +   K +F  M ++G+ P+   
Sbjct: 286 EGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRT 345

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ +  G  +E+  ++A  L   M      P++V +T++I G C +  ++RAI +  KM 
Sbjct: 346 YTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMK 405

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E G+ P++ ++  L+    +  +   A+E  Q +   G H    T+ ++        L  
Sbjct: 406 EQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFG 465

Query: 511 EAKRILSKIKNK 522
           EA  + SK++ K
Sbjct: 466 EAMDLKSKMEGK 477



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 219/472 (46%), Gaps = 24/472 (5%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+  L  RG+ ++A    + ++  G + + V+Y TL+  L       ++  ++ ++
Sbjct: 135 TLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKL 194

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E + + PD + +N +I++  ++  + +A D + +M   G++P   TYN L+ G+ I G  
Sbjct: 195 EGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHL 254

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+  LL+ M  + N+ P++ T+N L+ A   E  +  A  V+  M  + +KPDVVTYN+
Sbjct: 255 KEAFSLLNEMKLK-NINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNS 313

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    +   A+ V   M  +GV PN RT   +I G CKE  + EA+     MK   
Sbjct: 314 LIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKN 373

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P++V +  LI G  +    +    +   MKE  + PDV +Y+ +++A    G ++  K
Sbjct: 374 MIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAK 433

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E F  +   G   +   Y+++  G  +     +A +L   M   G  P+ + F TII   
Sbjct: 434 EFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICAL 493

Query: 434 CSDGSMDRAIEVFDKMCEHG-----------------------VSPNLKTFETLMWGYSE 470
                 D+A ++  +M   G                       + P++ T+ TLM GY  
Sbjct: 494 FEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFL 553

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             +   A+ +   M   GV P    + ++ +         EA  +  ++K+K
Sbjct: 554 VNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHK 605



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 212/447 (47%), Gaps = 19/447 (4%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  LMN          A ++  N+++ G+ P+ +T  TL+  L  +           QV
Sbjct: 100 TLNILMNCFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQV 159

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G   + + +  +IN   ++G  +       K++   + P    YNT+I         
Sbjct: 160 VAQGFQLNQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLL 219

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++  L   M  +G + PN+ TYN LV  +C   ++ EA++++++M    + PDV T+NT
Sbjct: 220 GDACDLYSEMIVKG-ISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNT 278

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A  + G+   A+ V+  M    ++P+  T   +I GY    K+K A     +M + G
Sbjct: 279 LIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSG 338

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMD 370
           V PN+  +  +I G  +      VDE ++L +E +     PD++TY+++++       ++
Sbjct: 339 VTPNVRTYTTMIDGLCK---EKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLE 395

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +   M + GI+PD ++Y+IL     +    E A+E    ++  G+H NV  +  +I
Sbjct: 396 RAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMI 455

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G C       A+++  KM   G  P+  TF+T++    E  +  +AE+IL+ M A G  
Sbjct: 456 NGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARG-- 513

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILS 517
                   L EAR+     KEAK +L+
Sbjct: 514 --------LQEARKVR--LKEAKIVLA 530



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 202/443 (45%), Gaps = 3/443 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++SL+         ++F      G  P L T   L+             S+++ + + G
Sbjct: 69  ILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRG 128

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P++I  N +I      G +++A+    ++   G      +Y TLI G    G+ +   
Sbjct: 129 YHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVA 188

Query: 198 KLLDLMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +LL  +  EG+ VKP++  YN ++ + C  K + +A ++  +M   G+ P+VVTYN +  
Sbjct: 189 RLLRKL--EGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVY 246

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            +   G   +A  ++ EM+   + P+  T   +I    KEGK+K A      M +  + P
Sbjct: 247 GFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKP 306

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++V +N LI G+  +        V   M +  V P+V TY+T+++       +D+   +F
Sbjct: 307 DVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLF 366

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M    + PD   Y+ L  G  +    E+A  L   M E G  P+V  +T ++   C  
Sbjct: 367 EEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKG 426

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G ++ A E F ++   G   N++T+  ++ G  +A     A ++   M+  G  P   TF
Sbjct: 427 GRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITF 486

Query: 497 LLLAEARRATGLTKEAKRILSKI 519
             +  A        +A++IL ++
Sbjct: 487 KTIICALFEKDENDKAEKILREM 509



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 79/335 (23%), Positives = 146/335 (43%), Gaps = 1/335 (0%)

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           +N ++ +  N K+     ++  K  ++G  PD+ T N +   +        A  V+  + 
Sbjct: 66  FNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANIL 125

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
             G  PN  T   +I G C  G+IK+AL F   +   G   N V +  LI G  +  +  
Sbjct: 126 KRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETK 185

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
            V  +L  ++   V PDV+ Y+TI+++      +    +++ +M   GI P+   Y+ L 
Sbjct: 186 AVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALV 245

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G+      ++A  LL  M     +P+V  F T+I     +G M  A  V   M +  + 
Sbjct: 246 YGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIK 305

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P++ T+ +L+ GY    +   A+ +   M   GV P   T+  + +      +  EA  +
Sbjct: 306 PDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSL 365

Query: 516 LSKIKNKERTNEMEAEEDIPVESLERLYHKEATTA 550
             ++K K    ++     + ++ L + +H E   A
Sbjct: 366 FEEMKYKNMIPDIVTYTSL-IDGLCKNHHLERAIA 399



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 55/113 (48%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T L+++L +    + A A+   + E G +P + +YT LL  L    R      I  
Sbjct: 611 IVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQ 670

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           ++   G   +   + A+IN   ++G  +EA+D   KM++ G  P   T++ +I
Sbjct: 671 RLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIII 723


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 217/411 (52%), Gaps = 1/411 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L  +G+  +A    +N++  G +   V Y TL+  L       +   ++ +V
Sbjct: 129 TFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRV 188

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + N + P+ + ++ +I+   +  ++ +A D + +M   G++P   TY+ LI G+   G+ 
Sbjct: 189 DGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQL 248

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++++ L + M  E N+KP++ T+N+LV  +C +  + E   V   M   G+KP+VVTY +
Sbjct: 249 KDAIDLFNKMILE-NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCS 307

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    E ++A+ ++  M   GV P+ ++  I+I G+CK  K+ EA+   + M    
Sbjct: 308 LMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKH 367

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P++V +N LI G  ++       +++  M +  V PD+ITYS+I++A      +DK  
Sbjct: 368 IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAI 427

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +   +   GI+P+ + Y+IL  G  +    E A  +   ++  G++  V  +T +I G+
Sbjct: 428 ALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGF 487

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           C+ G  D A+ +  KM ++   P+  T+E ++    +  +  +AE++ +++
Sbjct: 488 CNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLREMI 538



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 229/451 (50%), Gaps = 23/451 (5%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDP--------- 140
           +A ++F+ L+     P  + +  +L +L   K ++++ S+  Q+E  G++P         
Sbjct: 59  DAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPH 118

Query: 141 -------DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
                  ++I F  +I      G + +A+     +   G       Y TLI G    G  
Sbjct: 119 QLMGYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVG-- 176

Query: 194 EESVKLLDLMSR-EGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
            E+   LDL+ R +GN V+PN+  Y+ ++   C +K++ +A+++  +M + G+ P+VVTY
Sbjct: 177 -ETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTY 235

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRFARTMK 310
           + + + +   G+   A ++  +M    ++P+  T  I++ G+CK+GK+KE    FA  MK
Sbjct: 236 SALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMK 295

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G+ PN+V +  L+ G+  + + +    +L  M +  VNPD+ +Y+ +++ +     +D
Sbjct: 296 Q-GIKPNVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVD 354

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +F +M    I PD   Y+ L  G  +  +   A +L+  M + G  P+++ +++I+
Sbjct: 355 EAMNLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSIL 414

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C +  +D+AI +  K+ + G+ PN+ T+  L+ G  +  +   A  I + +   G +
Sbjct: 415 DALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYN 474

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
              +T+ ++       GL  EA  +LSK+K+
Sbjct: 475 ITVNTYTVMIHGFCNKGLFDEALALLSKMKD 505



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 192/398 (48%), Gaps = 7/398 (1%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G+ P+ +T+TTL+  L ++ + +        V   G   D + +  +I+   + G    A
Sbjct: 122 GYHPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAA 181

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           +D   ++  + + P    Y+T+I G        ++  L   M  +G + PN+ TY+ L+ 
Sbjct: 182 LDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKG-ISPNVVTYSALIS 240

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
            +     + +A ++ +KM    +KPDV T+N +   + ++G+  + + V   M   G++P
Sbjct: 241 GFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKP 300

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N  T   ++ GYC   ++ +A     TM + GV+P++  +N+LI GF +I     VDE +
Sbjct: 301 NVVTYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKI---KKVDEAM 357

Query: 342 ALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            L KE     + PDV+TY+++++     G +    ++ D+M   G+ PD   YS +    
Sbjct: 358 NLFKEMHHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDAL 417

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +  + +KA  LL  + + G  PN+  +T +I G C  G ++ A  +F+ +   G +  +
Sbjct: 418 CKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITV 477

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            T+  ++ G+        A  +L  MK     P   T+
Sbjct: 478 NTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTY 515



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 195/429 (45%), Gaps = 22/429 (5%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           FN +     K + + Y+++              S+ S++      P +I FN ++ +  +
Sbjct: 29  FNFIPYSSSKINFIPYSSISTTFHNNNDVVDAFSLFSRLLRQNPTPPAIEFNKILGSLVK 88

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
           S +    +    +M+  G+ P    +            P +      LM       PN  
Sbjct: 89  SKHYHTVLSLSQQMEFEGINPVLFHFQ----------HPHQ------LMGYH----PNTI 128

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           T+  L++  C +  I +A      + A G + D V Y T+     + GE   A +++  +
Sbjct: 129 TFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRV 188

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD- 333
           + N VQPN      II G CK+  + +A      M   G+ PN+V ++ LI GF  +   
Sbjct: 189 DGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQL 248

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
           +D +D    ++ E  + PDV T++ +++ +   G M + K +F  M K GIKP+   Y  
Sbjct: 249 KDAIDLFNKMILE-NIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCS 307

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L  GY   +E  KA+ +L TM + G +P++  +  +I G+C    +D A+ +F +M    
Sbjct: 308 LMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKH 367

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           + P++ T+ +L+ G  +  +   A +++  M   GV P   T+  + +A        +A 
Sbjct: 368 IIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAI 427

Query: 514 RILSKIKNK 522
            +L+K+K++
Sbjct: 428 ALLTKLKDQ 436



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 30/134 (22%), Positives = 66/134 (49%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + + ++++L +  +  +A A+   L + G +P++ TYT L+  L    R    H+I  
Sbjct: 407 IITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFE 466

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G +     +  +I+ F   G  +EA+    KMK++   P   TY  +I+      
Sbjct: 467 DLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKD 526

Query: 192 KPEESVKLLDLMSR 205
           + +++ KL ++++R
Sbjct: 527 ENDKAEKLREMITR 540


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 211/427 (49%), Gaps = 12/427 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++  L +RG+  EA ++ ++++  G +PS+VTYT LL A+     F     ++ ++
Sbjct: 178 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 237

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P+ + +N +IN     G +++A +   ++   G  P T +Y T++KG   A + 
Sbjct: 238 RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW 297

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E+  +L   M  E N  PN  T+++LVR +C    +  A  V+ +M+  G   +    N 
Sbjct: 298 EDVEELFAEMM-EKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 356

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G  D A + +  M   G  P+  +   ++ G C+  + ++A    + M    
Sbjct: 357 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 416

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDE----VLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
             PN V FN     F+ I+ + G+ E    ++  M E     +++TY+ ++N +   G +
Sbjct: 417 CPPNEVTFN----TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 472

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D   E+F  M     KP+   Y+ L  G    +  + A ELL  M++    PNVV F  +
Sbjct: 473 DSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVL 529

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           +S +C  G MD AIE+ ++M EHG +PNL T+ TL+ G ++      A E+L  + + GV
Sbjct: 530 VSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGV 589

Query: 490 HPQKSTF 496
            P   T+
Sbjct: 590 SPDIVTY 596



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 213/437 (48%), Gaps = 6/437 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + T L+ ++ +     +A  + + +   G  P++VTY  ++  +  + R +     +
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++   G  PD++ +  V+     +   E+  + F +M E    P   T++ L++ +   
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 329

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E ++++L+ MS  G    N    N+++   C +  + +A+  ++ M + G  PD ++
Sbjct: 330 GMVERAIQVLEQMSGHG-CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 388

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+     +    + A+E++ EM      PN  T    I   C++G I++A      M 
Sbjct: 389 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 448

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E+G   N+V +N L+ GF  +  R  VD  L L       P+ ITY+T++     A  +D
Sbjct: 449 EHGCEVNIVTYNALVNGFC-VQGR--VDSALELFYSMPCKPNTITYTTLLTGLCNAERLD 505

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              E+  +M +    P+   +++L   + ++   ++A EL+  M+E G  PN++ + T++
Sbjct: 506 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 565

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G   D + + A+E+   +  +GVSP++ T+ +++   S   +   A ++  I++  G+ 
Sbjct: 566 DGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMR 625

Query: 491 PQKSTF--LLLAEARRA 505
           P+   +  +LLA  +R 
Sbjct: 626 PKAVIYNKILLALCKRC 642



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 216/455 (47%), Gaps = 4/455 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N +   G+  +A+   N L   G +P  V+YTT+L  L   KR+  +  + +++ E  
Sbjct: 252 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 311

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + F+ ++  F   G +E A+    +M   G    T+  N +I      G+ +++ 
Sbjct: 312 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 371

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           + L+ M   G   P+  +Y  +++  C  +   +A  ++ +M      P+ VT+NT    
Sbjct: 372 QFLNNMGSYG-CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 430

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             Q G  +QA  +I +M  +G + N  T   +++G+C +G++  AL    +M      PN
Sbjct: 431 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPN 487

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +  L+ G       D   E+LA M +    P+V+T++ +++ +   G MD+  E+ +
Sbjct: 488 TITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVE 547

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + G  P+   Y+ L  G  ++   E+A ELL  ++ +G  P++V +++II     + 
Sbjct: 548 QMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSRED 607

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ AI++F  + + G+ P    +  ++    +      A +    M + G  P + T++
Sbjct: 608 RVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYI 667

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
            L E        KE + +L ++ ++   N+   EE
Sbjct: 668 TLIEGLANEDFLKETRDLLRELCSRGVLNKNLLEE 702



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 176/406 (43%), Gaps = 42/406 (10%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++ +    G  PD      +I      G   +A       + SG       YNTL+ GY 
Sbjct: 96  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 155

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G+ + + +L+  M     V P+  TY  ++R  C+   + EA +++  M   G +P V
Sbjct: 156 RYGQLDAARRLIASMP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 211

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTY  +  A  ++    QA EV+ EM   G  PN  T  +II+G C+EG++ +A  F   
Sbjct: 212 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 271

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           +  YG  P+ V +  ++KG       + V+E+ A M E    P+ +T+  ++  +   G 
Sbjct: 272 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 331

Query: 369 MDK---------------------------CK--------EIFDDMGKAGIKPDAHAYSI 393
           +++                           CK        +  ++MG  G  PD  +Y+ 
Sbjct: 332 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 391

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           + KG  R +  E A+ELL  M+     PN V F T I   C  G +++A  + ++M EHG
Sbjct: 392 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 451

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
              N+ T+  L+ G+       R +  L++  +    P   T+  L
Sbjct: 452 CEVNIVTYNALVNGFCVQ---GRVDSALELFYSMPCKPNTITYTTL 494



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 83/181 (45%), Gaps = 1/181 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           + K+    V +   L++   ++G   EA  +   ++E G  P+L+TY TLL  +T     
Sbjct: 515 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS 574

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                ++  +  NG+ PD + ++++I   S    +EEA+  F  +++ G+ P    YN +
Sbjct: 575 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 634

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           +         + ++     M   G   PN  TY  L+    NE  + E  +++ ++ + G
Sbjct: 635 LLALCKRCNTDGAIDFFAYMVSNG-CMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 693

Query: 244 M 244
           +
Sbjct: 694 V 694


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 212/419 (50%), Gaps = 10/419 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++   +E+G  + A  +F+N+ + G  PSL +  +LL  L      ++ H +  Q+   G
Sbjct: 162 ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVG 221

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD    + ++NAF + G ++EA     KM+  G+ P   TY++LI GY   G  E + 
Sbjct: 222 IVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAK 281

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA-ASGMKPDVVTYNTIAT 256
            +L  MS +G V  N+ TY +L++ +C +  + EA  V+  M   + + PD   Y  +  
Sbjct: 282 GVLKFMSEKG-VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLID 340

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y + G+ D A  ++ EM   G++ N   C  +I+GYCK G+I EA      M ++ + P
Sbjct: 341 GYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP 400

Query: 317 NLVIFNLLIKGFVEIMDRDG-VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           +   +N L+ G+     R+G   E   L   M +  + P V+TY+T++      G  D  
Sbjct: 401 DSYSYNTLLDGYC----REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            +I+  M K G+ PD   YS L  G  + +  E A  L   ++  GF  + + F T+ISG
Sbjct: 457 LQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 516

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            C  G M  A E+FDKM + G SP+  T+ TL+ GY +A    +A ++   M+   + P
Sbjct: 517 LCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISP 575



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 216/464 (46%), Gaps = 33/464 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+  L   G   +A  I++ +++ G  P  V Y+TLL  L   + F    ++ 
Sbjct: 436 TVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLW 495

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   G     I FN +I+   + G M EA + F KMK+ G +P   TY TLI GY  A
Sbjct: 496 KDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKA 555

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
               ++ K+   M RE  + P++  YN L+      + + E  +++ +M   G+ P++VT
Sbjct: 556 SNVGQAFKVKGAMERE-XISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVT 614

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +   + + G  D+A     EM  NG+  N   C  ++SG  + G+I EA    + M 
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 311 EYGVHP--------------------------------NLVIFNLLIKGFVEIMDRDGVD 338
           ++G  P                                N +++N+ I G  +    D   
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
              +++      PD  TY T+++ +S AG +D+   + D+M + G+ P+   Y+ L  G 
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            + +  ++A+ L   + + G  PNVV + T+I G+C  G+MD A ++ DKM E G+SP++
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSV 854

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            T+  L+ G  +     R+ ++L  M   GV  +   +  L + 
Sbjct: 855 VTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQG 898



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/497 (24%), Positives = 215/497 (43%), Gaps = 70/497 (14%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++RS   L+N+L++ G+   A  ++  +I  G  P +   + ++ A     + +     +
Sbjct: 190 SLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFV 249

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++E  G++P+ + ++++IN +   G++E A      M E G++    TY  LIKGY   
Sbjct: 250 KKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 309

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K +E+ K+L  M  E  + P+ R Y VL+  +C    I +A  ++ +M   G+K ++  
Sbjct: 310 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 369

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            N++   Y + GE  +AE VI  M    ++P+  +   ++ GYC+EG   EA      M 
Sbjct: 370 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 429

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA-------- 362
           + G+ P ++ +N L+KG   +   D   ++  LM +  V PD + YST+++         
Sbjct: 430 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFE 489

Query: 363 -----W----------------------STAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
                W                         G M + +EIFD M   G  PD   Y  L 
Sbjct: 490 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549

Query: 396 KGYVREQEPEKA-----------------------------------EELLMTMIESGFH 420
            GY +     +A                                    +LL  M   G  
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLT 609

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN+V +  +I GWC +G +D+A   + +M E+G+S N+    T++ G     +   A  +
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 669

Query: 481 LQIMKAFGVHPQKSTFL 497
           +Q M   G  P    FL
Sbjct: 670 MQKMVDHGFFPDHECFL 686



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/597 (22%), Positives = 253/597 (42%), Gaps = 68/597 (11%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+   L++     GK  +A  + + ++  G K +L    +L+     +   +    ++++
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + +  + PDS  +N +++ +   G+  EA +   KM + G+ PT  TYNTL+KG    G 
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            ++++++  LM + G V P+   Y+ L+      +N   A  +   + A G     +T+N
Sbjct: 453 FDDALQIWHLMMKXG-VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFN 511

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+ +   + G+  +AEE+  +M+  G  P+G T   +I GYCK   + +A +    M+  
Sbjct: 512 TMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMERE 571

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
            + P++ ++N LI G  +        ++L  M    + P+++TY  +++ W   G +DK 
Sbjct: 572 XISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP----------- 421
              + +M + G+  +    S +  G  R    ++A  L+  M++ GF P           
Sbjct: 632 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIR 691

Query: 422 ---------------------NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
                                N +++   I+G C  G +D A   F  +   G  P+  T
Sbjct: 692 YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFT 751

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           + TL+ GYS A     A  +   M   G+ P   T+  L                L K +
Sbjct: 752 YCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALING-------------LCKSE 798

Query: 521 NKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQK--GSAAALK-KGR 577
           N +R               +RL+HK      +PN++    ++    K     AA K K +
Sbjct: 799 NVDRA--------------QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 844

Query: 578 MLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPLGQVGMYSQLANSCTVV 634
           M+      S+      T S  ++  CK G     +     + + G+ S+L   CT+V
Sbjct: 845 MIEEGISPSV-----VTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLV 896



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 186/378 (49%), Gaps = 2/378 (0%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           F+ ++  + E G  + A+  F  M + G  P+  + N+L+      G+   +  +   M 
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G V P++   +++V A+C +  + EA   + KM   G++P++VTY+++   Y   G+ 
Sbjct: 219 RVGIV-PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE-YGVHPNLVIFNL 323
           + A+ V+  M   GV  N  T  ++I GYCK+ K+ EA +  R M+E   + P+   + +
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           LI G+      D    +L  M    +  ++   ++++N +   G + + + +   M    
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           +KPD+++Y+ L  GY RE    +A  L   M++ G  P V+ + T++ G C  G+ D A+
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           +++  M + GV+P+   + TL+ G  +      A  + + + A G    + TF  +    
Sbjct: 458 QIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517

Query: 504 RATGLTKEAKRILSKIKN 521
              G   EA+ I  K+K+
Sbjct: 518 CKMGKMVEAEEIFDKMKD 535


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 221/466 (47%), Gaps = 34/466 (7%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A + FN ++   H P ++ +  +L +    K +++  S+  ++E  G+ PD I  N +I
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN- 208
           N F   G +        K+ + G  P T T NTLIKG  + G+ ++++   D +  +G  
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQ 161

Query: 209 ---------------------------------VKPNLRTYNVLVRAWCNEKNITEAWNV 235
                                             KPN+  Y+ ++ A C  + ++EA+ +
Sbjct: 162 LNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGL 221

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
             +M   G+  DVVTY+T+   +   G+  +A  ++ EM    + PN  T  I++   CK
Sbjct: 222 FSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCK 281

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           EGK+KEA      M +  V P+++ ++ L+ G+  + +      V   M    V PDV T
Sbjct: 282 EGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHT 341

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+ ++N +     +D+   +F +M +  + P    YS L  G  +        +L+  M 
Sbjct: 342 YTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMR 401

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           + G   +V+ ++++I G C +G +DRAI +F+KM +  + PN+ TF  L+ G  +  +  
Sbjct: 402 DRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLK 461

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            A+E+ Q +   G H    T+ ++       GL +EA  +LSK+++
Sbjct: 462 DAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMED 507



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 221/416 (53%), Gaps = 1/416 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+  L  +G+ ++A    + L+  G + + V+Y TL+  +           ++ ++
Sbjct: 131 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKI 190

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +     P+   ++ +I+A  +   + EA   F +M   G++    TY+TLI G+ I GK 
Sbjct: 191 DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKL 250

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E++ LL+ M  +  + PN+ TYN+LV A C E  + EA +V+  M  + +KPDV+TY+T
Sbjct: 251 KEAIGLLNEMVLK-TINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYST 309

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    E  +A+ V   M   GV P+  T  I+I+G+CK   + EAL   + M +  
Sbjct: 310 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P +V ++ LI G  +      V +++  M++     DVITYS++++     G +D+  
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAI 429

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F+ M    I+P+   ++IL  G  +    + A+E+   ++  G+H NV  +  +I+G 
Sbjct: 430 ALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGH 489

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           C  G ++ A+ +  KM ++G  PN  TFET++    +  +  +AE++L+ M A G+
Sbjct: 490 CKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 77/331 (23%), Positives = 136/331 (41%), Gaps = 35/331 (10%)

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           +N+ +A +  ++M      P ++ +N I  ++A+      A  +   +E  G+QP+  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF------------------ 328
            I+I+ +C  G+I         + + G  P+ V  N LIKG                   
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLA 157

Query: 329 -----------------VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
                             +I D  G  ++L  +      P+V  YSTI++A      + +
Sbjct: 158 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSE 217

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F +M   GI  D   YS L  G+  E + ++A  LL  M+    +PNV  +  ++ 
Sbjct: 218 AYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             C +G +  A  V   M +  V P++ T+ TLM GY    +  +A+ +   M   GV P
Sbjct: 278 ALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTP 337

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              T+ +L        +  EA  +  ++  K
Sbjct: 338 DVHTYTILINGFCKNKMVDEALNLFKEMHQK 368



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 64/136 (47%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L + G    A A+FN + +   +P++ T+T LL  L    R      +  
Sbjct: 409 VITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQ 468

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G   +   +N +IN   + G +EEA+    KM+++G  P   T+ T+I       
Sbjct: 469 DLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKD 528

Query: 192 KPEESVKLLDLMSREG 207
           + +++ KLL  M   G
Sbjct: 529 ENDKAEKLLRQMIARG 544


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 218/418 (52%), Gaps = 1/418 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++T L+  L  RG+ ++A    ++++    +   ++Y TL+  L       +   +M 
Sbjct: 139 VITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMR 198

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +EE  + PD + +N +I++  ++  + EA + + +M    + P   TY TLI G+ I G
Sbjct: 199 NLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMG 258

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E+V LL+ M  + N+ P++ T+++L+ A   E  +  A  V+  M  + +KPDVVTY
Sbjct: 259 CLIEAVALLNEMKLK-NINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTY 317

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++   Y    E   A+ V   M  +GV P  ++  I+I G CK   + EA+     MK 
Sbjct: 318 NSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKH 377

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             V PN + FN LI G  +      V +++  M++     DVITYS++++A      +D+
Sbjct: 378 KNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQ 437

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F  M    I+PD + Y+IL  G  +    + A+E+   ++  G+H ++  +T +IS
Sbjct: 438 AIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMIS 497

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           G+C  G  D A+ +  KM ++G  PN  TF+ ++    E  +  +AE++L+ M A G+
Sbjct: 498 GFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 116/499 (23%), Positives = 218/499 (43%), Gaps = 38/499 (7%)

Query: 59  HCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT 118
           H   C ++ +C    +M    +         +A A+FN ++     P    +  +L++L 
Sbjct: 21  HSLLCYSQSACTRASAMLHSQSHYNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLV 80

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
             +RF +  S+   ++  G+  D +  N +IN F   G +  +      + + G  P   
Sbjct: 81  KMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVI 140

Query: 179 TYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
           T  TLIKG  + G+ ++++K   D+++ E  +  +  +Y  L+   C       A  +M 
Sbjct: 141 TLTTLIKGLCLRGEVKKALKFHDDVVALEFQL--DRISYGTLINGLCKIGETKAAIQLMR 198

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
            +    +KPDVV YN I  +  +N    +A  +  EM    + PN  T   +I G+C  G
Sbjct: 199 NLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMG 258

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
            + EA+     MK   ++P++  F++LI    +         VLA+M +  V PDV+TY+
Sbjct: 259 CLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYN 318

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           ++++ +     +   K +F+ M ++G+ P   +Y+I+  G  + +  ++A  L   M   
Sbjct: 319 SLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHK 378

Query: 418 GFHPNVVIFTTIISGWCSDG-----------------------------------SMDRA 442
              PN + F ++I G C  G                                    +D+A
Sbjct: 379 NVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQA 438

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           I +F KM    + P++ T+  L+ G  +  +   A+E+ Q +   G H    T+ ++   
Sbjct: 439 IALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISG 498

Query: 503 RRATGLTKEAKRILSKIKN 521
               GL  EA  +LSK+++
Sbjct: 499 FCKAGLFDEALALLSKMED 517



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 88/411 (21%), Positives = 199/411 (48%), Gaps = 14/411 (3%)

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP 211
           ++   +  +A+  F +M      P T  +N ++       +   ++ L   +  +G +  
Sbjct: 44  YNNHNDHNDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKG-ITS 102

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA---E 268
           +L T N+L+  +C+   IT +++V+  +   G  PDV+T  T+       GE  +A    
Sbjct: 103 DLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFH 162

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           + +V +E    Q +  + G +I+G CK G+ K A++  R ++E  + P++V++N++I   
Sbjct: 163 DDVVALEF---QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSL 219

Query: 329 VEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            +      V E   L  E    ++ P+V+TY+T++  +   G + +   + ++M    I 
Sbjct: 220 CK---NKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNIN 276

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD + +SIL     +E + + A+ +L  M+++   P+VV + +++ G+     +  A  V
Sbjct: 277 PDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYV 336

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F+ M + GV+P ++++  ++ G  + +    A  + + MK   V P   TF  L +    
Sbjct: 337 FNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCK 396

Query: 506 TGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLL 556
           +G       ++ K++++ +  ++     + +++L +  H +   A +  ++
Sbjct: 397 SGRIAYVWDLVDKMRDRSQLADVITYSSL-IDALCKNCHLDQAIALFKKMI 446


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 212/419 (50%), Gaps = 10/419 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++   +E+G  + A  +F+N+ + G  PSL +  +LL  L      ++ H +  Q+   G
Sbjct: 162 ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVG 221

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD    + ++NAF + G ++EA     KM+  G+ P   TY++LI GY   G  E + 
Sbjct: 222 IVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAK 281

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA-ASGMKPDVVTYNTIAT 256
            +L  MS +G V  N+ TY +L++ +C +  + EA  V+  M   + + PD   Y  +  
Sbjct: 282 GVLKFMSEKG-VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLID 340

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y + G+ D A  ++ EM   G++ N   C  +I+GYCK G+I EA      M ++ + P
Sbjct: 341 GYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP 400

Query: 317 NLVIFNLLIKGFVEIMDRDG-VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           +   +N L+ G+     R+G   E   L   M +  + P V+TY+T++      G  D  
Sbjct: 401 DSYSYNTLLDGYC----REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            +I+  M K G+ PD   YS L  G  + +  E A  L   ++  GF  + + F T+ISG
Sbjct: 457 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 516

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            C  G M  A E+FDKM + G SP+  T+ TL+ GY +A    +A ++   M+   + P
Sbjct: 517 LCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP 575



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 125/469 (26%), Positives = 218/469 (46%), Gaps = 33/469 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+  L   G   +A  I++ +++ G  P  V Y+TLL  L   + F    ++ 
Sbjct: 436 TVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLW 495

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   G     I FN +I+   + G M EA + F KMK+ G +P   TY TLI GY  A
Sbjct: 496 KDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKA 555

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
               ++ K+   M RE  + P++  YN L+      + + E  +++ +M   G+ P++VT
Sbjct: 556 SNVGQAFKVKGAMERE-PISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT 614

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +   + + G  D+A     EM  NG+  N   C  ++SG  + G+I EA    + M 
Sbjct: 615 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 311 EYGVHP--------------------------------NLVIFNLLIKGFVEIMDRDGVD 338
           ++G  P                                N +++N+ I G  +    D   
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 734

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
              +++      PD  TY T+++ +S AG +D+   + D+M + G+ P+   Y+ L  G 
Sbjct: 735 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 794

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            + +  ++A+ L   + + G  PNVV + T+I G+C  G+MD A ++ DKM E G+SP++
Sbjct: 795 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSV 854

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            T+  L+ G  +     R+ ++L  M   GV  +   +  L +    +G
Sbjct: 855 VTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSG 903



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 219/497 (44%), Gaps = 70/497 (14%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++RS   L+N+L++ G+   A  ++  +I  G  P +   + ++ A     + +     +
Sbjct: 190 SLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFV 249

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++E  G++P+ + ++++IN +   G++E A      M E G++    TY  LIKGY   
Sbjct: 250 KKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 309

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K +E+ K+L  M  E  + P+ R Y VL+  +C    I +A  ++ +M   G+K ++  
Sbjct: 310 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 369

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            N++   Y + GE  +AE VI  M    ++P+  +   ++ GYC+EG   EA      M 
Sbjct: 370 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 429

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA-------- 362
           + G+ P ++ +N L+KG   +   D   ++  LM +  V PD + YST+++         
Sbjct: 430 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFE 489

Query: 363 -----WS---TAGF-------------------MDKCKEIFDDMGKAGIKPDAHAYSILA 395
                W      GF                   M + +EIFD M   G  PD   Y  L 
Sbjct: 490 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 549

Query: 396 KGYVR--------------EQEP---------------------EKAEELLMTMIESGFH 420
            GY +              E+EP                      +  +LL  M   G  
Sbjct: 550 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLT 609

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN+V +  +I GWC +G +D+A   + +M E+G+S N+    T++ G     +   A  +
Sbjct: 610 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 669

Query: 481 LQIMKAFGVHPQKSTFL 497
           +Q M   G  P    FL
Sbjct: 670 MQKMVDHGFFPDHECFL 686



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 136/597 (22%), Positives = 254/597 (42%), Gaps = 68/597 (11%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+   L++     GK  +A  + + ++  G K +L    +L+     +   +    ++++
Sbjct: 333 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 392

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + +  + PDS  +N +++ +   G+  EA +   KM + G+ PT  TYNTL+KG    G 
Sbjct: 393 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 452

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            ++++++  LM + G V P+   Y+ L+      +N   A  +   + A G     +T+N
Sbjct: 453 FDDALQIWHLMMKRG-VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFN 511

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+ +   + G+  +AEE+  +M+  G  P+G T   +I GYCK   + +A +    M+  
Sbjct: 512 TMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMERE 571

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
            + P++ ++N LI G  +      V ++L  M    + P+++TY  +++ W   G +DK 
Sbjct: 572 PISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 631

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP----------- 421
              + +M + G+  +    S +  G  R    ++A  L+  M++ GF P           
Sbjct: 632 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIR 691

Query: 422 ---------------------NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
                                N +++   I+G C  G +D A   F  +   G  P+  T
Sbjct: 692 YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFT 751

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           + TL+ GYS A     A  +   M   G+ P   T+  L                L K +
Sbjct: 752 YCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALING-------------LCKSE 798

Query: 521 NKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQK--GSAAALK-KGR 577
           N +R               +RL+HK      +PN++    ++    K     AA K K +
Sbjct: 799 NVDRA--------------QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 844

Query: 578 MLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPLGQVGMYSQLANSCTVV 634
           M+      S+      T S  ++  CK G     +     + + G+ S+L   CT+V
Sbjct: 845 MIEEGISPSV-----VTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLV 896



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 186/378 (49%), Gaps = 2/378 (0%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           F+ ++  + E G  + A+  F  M + G  P+  + N+L+      G+   +  +   M 
Sbjct: 159 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 218

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G V P++   +++V A+C +  + EA   + KM   G++P++VTY+++   Y   G+ 
Sbjct: 219 RVGIV-PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 277

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE-YGVHPNLVIFNL 323
           + A+ V+  M   GV  N  T  ++I GYCK+ K+ EA +  R M+E   + P+   + +
Sbjct: 278 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 337

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           LI G+      D    +L  M    +  ++   ++++N +   G + + + +   M    
Sbjct: 338 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 397

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           +KPD+++Y+ L  GY RE    +A  L   M++ G  P V+ + T++ G C  G+ D A+
Sbjct: 398 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 457

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           +++  M + GV+P+   + TL+ G  +      A  + + + A G    + TF  +    
Sbjct: 458 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 517

Query: 504 RATGLTKEAKRILSKIKN 521
              G   EA+ I  K+K+
Sbjct: 518 CKMGKMVEAEEIFDKMKD 535



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/337 (24%), Positives = 158/337 (46%), Gaps = 31/337 (9%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           PS+  Y +L++ L   +R   +  +++++   G+ P+ + + A+I+ + + G +++A  +
Sbjct: 575 PSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSS 634

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN---------------- 208
           +++M E+GL+      +T++ G    G+ +E+  L+  M   G                 
Sbjct: 635 YFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAA 694

Query: 209 ---------------VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
                          + PN   YN+ +   C    + +A      ++  G  PD  TY T
Sbjct: 695 IQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCT 754

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y+  G  D+A  +  EM   G+ PN  T   +I+G CK   +  A R    + + G
Sbjct: 755 LIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKG 814

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + PN+V +N LI G+ +I + D   ++   M E  ++P V+TYS ++N     G +++  
Sbjct: 815 LFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSM 874

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           ++ + M KAG+      Y  L +GY+R  E +K  +L
Sbjct: 875 KLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKL 911


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 216/419 (51%), Gaps = 1/419 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  +   L+  L  +G   +A    + ++  G     V+Y TL+  L    R  +   ++
Sbjct: 130 TAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLL 189

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +V+   + P+++ +N +I+   ++  + +A D + +M    + P   TYN LI G+   
Sbjct: 190 KRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAV 249

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K   ++ L + M +E N+ PN+ T+N+LV  +C E  + +A  V+  M    +KPDVVT
Sbjct: 250 SKLNYAIDLFNKMKKE-NINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVT 308

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++   Y    + ++A+++   M   GV  N +    +++G+CK   + EA+     M+
Sbjct: 309 YNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMR 368

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              + PN+V ++ LI G  ++       +++  M +    P+++TYS+I++A      +D
Sbjct: 369 CRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVD 428

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +  ++   GI+PD + Y+IL KG  +    E A+ +   ++  G++ +V  +T +I
Sbjct: 429 KAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMI 488

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            G+C  G  D+A+ +  KM ++G  PN KT+E ++    E  +   AE++L+ M   G+
Sbjct: 489 QGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547



 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 112/428 (26%), Positives = 216/428 (50%), Gaps = 6/428 (1%)

Query: 95  FNNLIEGGHK---PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINA 151
           FN+L+   HK   P    +  +L++L   K  ++  S+  Q+E NG++ D   FN +IN 
Sbjct: 48  FNHLLL--HKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILINC 105

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP 211
           FS+ G    +   F K+ + G  PT  T+NTLIKG  + G   +++   D +  +G    
Sbjct: 106 FSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQG-FHL 164

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           +  +Y  L+   C    IT A  ++ ++    ++P+ V YN I     +    + A ++ 
Sbjct: 165 DQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLY 224

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            +M    + P+  T   +ISG+    K+  A+     MK+  ++PN+  FN+L+ GF + 
Sbjct: 225 SQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKE 284

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
              +    VLA+M +  + PDV+TY+++M+ + +   ++K K+IFD M   G+  +   Y
Sbjct: 285 GKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIY 344

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + +  G+ + +  ++A  L   M      PNVV ++++I G C  G +  A+++ D+M +
Sbjct: 345 TTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHD 404

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            G  PN+ T+ +++    +     +A  +L  +K  G+ P   T+ +L +    +G  ++
Sbjct: 405 RGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLED 464

Query: 512 AKRILSKI 519
           A+ +   +
Sbjct: 465 AQNVFEDL 472



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 157/354 (44%), Gaps = 36/354 (10%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           K  C  V +   L++      K   A  +FN + +    P++ T+  L+     + + N 
Sbjct: 230 KRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVND 289

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              +++ + ++ + PD + +N++++ +     + +A D F  M   G+      Y T++ 
Sbjct: 290 AKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVN 349

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G+      +E++ L + M R   + PN+ TY+ L+   C    I  A  ++ +M   G  
Sbjct: 350 GFCKIKMVDEAINLFEEM-RCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQP 408

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P++VTY++I  A  +N   D+A  ++  ++  G++P+  T  I+I G C+ G++++A   
Sbjct: 409 PNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQN- 467

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
                        V  +LL+KG+                     N DV  Y+ ++  +  
Sbjct: 468 -------------VFEDLLVKGY---------------------NLDVYAYTVMIQGFCD 493

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
            GF DK   +   M   G  P+A  Y ++      + E + AE+LL  MI  G 
Sbjct: 494 KGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 228/455 (50%), Gaps = 40/455 (8%)

Query: 68  SCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           +CR    S T LM +L       +A  +  ++   G +  +VTY TL+  L      +  
Sbjct: 110 ACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKA 169

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
             +M ++ E+G++P+ + +++++  + +SG  E+    F +M E G+ P    Y  LI  
Sbjct: 170 VELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDS 229

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
               GK +++  ++D+M R G ++PN+ TYNVL+   C E ++ EA  V+ KM+  G+ P
Sbjct: 230 LCKVGKAKKAHGVMDMMVRRG-LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAP 288

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEH--NGVQPNGRTCGIIISGYCKEGKIKEALR 304
           DVVTYNT+    +   E D+A  ++ EM    N V+PN  T   +I G C  G++++A +
Sbjct: 289 DVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ 348

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFV---------EIMDR--------------------- 334
               M+E G   NLV +NLLI G +         E+MD                      
Sbjct: 349 VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFC 408

Query: 335 -----DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
                D  +++L+ M++  + P++  Y  ++ A    G M++ + +F++M       D  
Sbjct: 409 KMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVV 467

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           AYS +  G  +  + + A+ELL ++++ G  P+ V ++ +I+ +   G M+ A  V  +M
Sbjct: 468 AYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
              G  P++  F++L+ GYS   +  +  E+++ M
Sbjct: 528 TASGFLPDVAVFDSLIQGYSTKGEINKVLELIREM 562



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 230/457 (50%), Gaps = 7/457 (1%)

Query: 68  SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH---KPSLVTYTTLLAALTIQKRFN 124
           S R   S   ++ +L  RG    A A+   +    H   +P+ V+YT L+ AL   +  +
Sbjct: 73  SVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLAD 132

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
               ++  +   G+  D + +  +I    ++  +++A++   +M ESG+ P    Y++L+
Sbjct: 133 QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLL 192

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           +GY  +G+ E+  K+   MS +G ++P++  Y  L+ + C      +A  VM  M   G+
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKG-IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           +P+VVTYN +     + G   +A  V+ +M   GV P+  T   +I G     ++ EA+ 
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 305 FARTM--KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
               M   +  V PN+V FN +I+G  +I       +V A+M+E     +++TY+ ++  
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
                 + K  E+ D+M   G++PD+  YSIL KG+ +  + ++AE+LL TM + G  P 
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           +  +  ++   C  G M+RA  +F++M ++    ++  + T++ G  +A     A+E+L+
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLK 490

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            +   G+ P   T+ ++      +G  + A  +L ++
Sbjct: 491 SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 207/432 (47%), Gaps = 34/432 (7%)

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGN--VKPNLRTYNVLVRAWCNEKNITEAWNVM 236
           +YNT++      G  + +  LL  MS E +   +PN  +Y VL+RA C ++   +A  ++
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
             M ++G++ DVVTY T+        E D+A E++ EM  +G++PN      ++ GYCK 
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
           G+ ++  +    M E G+ P++V++  LI    ++        V+ +M    + P+V+TY
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           + ++N     G + +   +   M + G+ PD   Y+ L KG     E ++A  LL  M+ 
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318

Query: 417 SG--FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
                 PNVV F ++I G C  G M +A +V   M E G   NL T+  L+ G     + 
Sbjct: 319 GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKV 378

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI 534
            +A E++  M + G+ P   T+ +L +          A+ +LS ++++     +E E   
Sbjct: 379 RKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR----GIEPE--- 431

Query: 535 PVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFAT 594
                  L+H             IP +V+  ++G    +++ R L  + D++      A 
Sbjct: 432 -------LFH------------YIPLLVAMCEQG---MMERARNLFNEMDNNFPLDVVAY 469

Query: 595 TSMYLSHSCKSG 606
           ++M +  +CK+G
Sbjct: 470 STM-IHGACKAG 480



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 196/390 (50%), Gaps = 14/390 (3%)

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMK---ESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           D++ +N V+ A    G+ + A      M         P   +Y  L++        +++V
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M R   V+ ++ TY  L+R  C+   + +A  +M +M  SG++P+VV Y+++   
Sbjct: 136 GLLRSM-RSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y ++G  +   +V VEM   G++P+      +I   CK GK K+A      M   G+ PN
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254

Query: 318 LVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCK 373
           +V +N+LI      M ++G V E + ++K+     V PDV+TY+T++   S    MD+  
Sbjct: 255 VVTYNVLIN----CMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAM 310

Query: 374 EIFDDM--GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            + ++M  GK  +KP+   ++ + +G        +A ++   M E+G   N+V +  +I 
Sbjct: 311 WLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIG 370

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G      + +A+E+ D+M   G+ P+  T+  L+ G+ +  Q  RAE++L  M+  G+ P
Sbjct: 371 GLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEP 430

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           +   ++ L  A    G+ + A+ + +++ N
Sbjct: 431 ELFHYIPLLVAMCEQGMMERARNLFNEMDN 460



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/398 (23%), Positives = 177/398 (44%), Gaps = 70/398 (17%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L+    + G+ ++   +F  + E G +P +V YT L+ +L    +    H +M  +  
Sbjct: 189 SSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR 248

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++P+ + +N +IN   + G+++EA+    KM E G+ P   TYNTLIKG     + +E
Sbjct: 249 RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDE 308

Query: 196 SVKLLDLMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNV------------------- 235
           ++ LL+ M R  N VKPN+ T+N +++  C+   + +A+ V                   
Sbjct: 309 AMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLL 368

Query: 236 ----------------MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
                           M +M + G++PD  TY+ +   + +  + D+AE+++  M   G+
Sbjct: 369 IGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428

Query: 280 QP-----------------------------NGRTCGII-----ISGYCKEGKIKEALRF 305
           +P                             N     ++     I G CK G +K A   
Sbjct: 429 EPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKEL 488

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
            +++ + G+ P+ V ++++I  F +  D +  + VL  M      PDV  + +++  +ST
Sbjct: 489 LKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST 548

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
            G ++K  E+  +M    I  D+   S L+   V   E
Sbjct: 549 KGEINKVLELIREMITKNIALDSKIISTLSTSLVASNE 586



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 19/112 (16%), Positives = 53/112 (47%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + +++   + G  + A+ +  ++++ G  P  VTY+ ++          + + ++ 
Sbjct: 466 VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLK 525

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           Q+  +G  PD   F+++I  +S  G + + ++   +M    +   +   +TL
Sbjct: 526 QMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTL 577


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 223/451 (49%), Gaps = 5/451 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++    G  + A A+ ++++  G KP +VTY ++L  L     ++    +  ++++ G
Sbjct: 136 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 195

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   F  +I  F   G +EEA+  + +M+  G+ P   +++ LI  +   GK + ++
Sbjct: 196 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 255

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             L  M   G V P+   Y +++  +C    +++A  V  +M   G  PDVVTYNT+   
Sbjct: 256 AYLREMRCFGLV-PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 314

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +      AE ++ EM   GV P+  T   +I GYC EGK+ +AL+   TM    + P+
Sbjct: 315 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 374

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N LI G     D D  +++   M    + P+ +TYS ++++    G ++      D
Sbjct: 375 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 434

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   GI P+   Y+ + KGY R     K ++ L  M+ +   P+++ + T+I G+  + 
Sbjct: 435 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 494

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M  A ++ + M +  V P++ T+  L+ G+S       A  I + M A G+ P + T++
Sbjct: 495 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 554

Query: 498 LLAEARRATGLTKEA----KRILSKIKNKER 524
            +       G +KEA      +L + K K R
Sbjct: 555 SMINGHVTAGNSKEAFQLHDEMLQRGKEKRR 585



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 220/435 (50%), Gaps = 36/435 (8%)

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F+ + +++S++E+  + PD +  N +++A   +G+ E AM     M   GL P   TYN+
Sbjct: 111 FDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNS 170

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           ++KG   +G  +++ ++   M   G V P++R++ +L+  +C    I EA  +  +M   
Sbjct: 171 VLKGLCRSGMWDKAWEVFKEMDDFG-VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHR 229

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+KPD+V+++ +   +A+ G+ D A   + EM   G+ P+G    ++I G+C+ G + +A
Sbjct: 230 GIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDA 289

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVE---IMDRDG----------------------- 336
           LR    M   G  P++V +N L+ G  +   ++D +G                       
Sbjct: 290 LRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHG 349

Query: 337 ------VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
                 +D+ L L   M   R+ PD++TY+T+++     G +DK  +++DDM    I P+
Sbjct: 350 YCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPN 409

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              YSIL   +  + + E A   L  MI  G  PN++ + +II G+C  G++ +  +   
Sbjct: 410 HVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQ 469

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           KM  + VSP+L T+ TL+ GY +  +   A ++L +M+   V P   T+ +L       G
Sbjct: 470 KMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHG 529

Query: 508 LTKEAKRILSKIKNK 522
             +EA  I  K+  K
Sbjct: 530 NVQEAGWIFEKMCAK 544



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 191/365 (52%), Gaps = 7/365 (1%)

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A D +  +  S     T T N ++  Y  A + ++   ++  M +   V P++ T+NV+V
Sbjct: 79  AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRC-VFPDVVTHNVMV 137

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
            A     +   A  ++  M + G+KP +VTYN++     ++G  D+A EV  EM+  GV 
Sbjct: 138 DARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 197

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+ R+  I+I G+C+ G+I+EAL+  + M+  G+ P+LV F+ LI  F     R  +D  
Sbjct: 198 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR---RGKMDHA 254

Query: 341 LALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           +A ++E R   + PD + Y+ ++  +  AG M     + D+M   G  PD   Y+ L  G
Sbjct: 255 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 314

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             +E+    AE LL  M E G  P++  FTT+I G+C +G +D+A+++FD M    + P+
Sbjct: 315 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 374

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + T+ TL+ G        +A ++   M +  + P   T+ +L ++    G  ++A   L 
Sbjct: 375 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 434

Query: 518 KIKNK 522
           ++ NK
Sbjct: 435 EMINK 439



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 195/382 (51%), Gaps = 1/382 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           VRS T L+      G+ +EA  I+  +   G KP LV+++ L+     + + +   + + 
Sbjct: 200 VRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLR 259

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD + +  VI  F  +G M +A+    +M   G  P   TYNTL+ G     
Sbjct: 260 EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 319

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  ++  LL+ M RE  V P+L T+  L+  +C E  + +A  +   M    ++PD+VTY
Sbjct: 320 RLLDAEGLLNEM-RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 378

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+     + G+ D+A ++  +M    + PN  T  I+I  +C++G++++A  F   M  
Sbjct: 379 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 438

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN++ +N +IKG+    +     + L  M   +V+PD+ITY+T+++ +     M  
Sbjct: 439 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHD 498

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++ + M K  ++PD   Y++L  G+      ++A  +   M   G  P+   + ++I+
Sbjct: 499 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMIN 558

Query: 432 GWCSDGSMDRAIEVFDKMCEHG 453
           G  + G+   A ++ D+M + G
Sbjct: 559 GHVTAGNSKEAFQLHDEMLQRG 580



 Score = 72.8 bits (177), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 39/147 (26%), Positives = 71/147 (48%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +NK     + +   ++      G   + Q     ++     P L+TY TL+     + + 
Sbjct: 437 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKM 496

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +++ +E+  + PD + +N +IN FS  GN++EA   F KM   G+ P   TY ++
Sbjct: 497 HDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSM 556

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVK 210
           I G+  AG  +E+ +L D M + G  K
Sbjct: 557 INGHVTAGNSKEAFQLHDEMLQRGKEK 583


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 210/427 (49%), Gaps = 12/427 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++  L +RG+  EA ++ ++++  G +PS+VTYT LL A+     F     ++ ++
Sbjct: 147 TYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDEM 206

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P+ + +N +IN     G +++A +   ++   G  P T +Y T++KG   A + 
Sbjct: 207 RAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRW 266

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E+  +L   M  E N  PN  T+++LVR +C    +  A  V+ +M+  G   +    N 
Sbjct: 267 EDVEELFAEMM-EKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G  D A + +  M   G  P+  +   ++ G C+  + ++A    + M    
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDE----VLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
             PN V FN     F+ I+ + G+ E    ++  M E     +++TY+ ++N +   G +
Sbjct: 386 CPPNEVTFN----TFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRV 441

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D   E+F  M     KP+   Y+ L  G    +  + A ELL  M++    PNVV F  +
Sbjct: 442 DSALELFYSM---PCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVL 498

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           +S +C  G MD AIE+ ++M EHG +PNL T+ TL+ G +       A E+L  + + GV
Sbjct: 499 VSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGV 558

Query: 490 HPQKSTF 496
            P   T+
Sbjct: 559 SPDIVTY 565



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 101/437 (23%), Positives = 214/437 (48%), Gaps = 6/437 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + T L+ ++ +     +A  + + +   G  P++VTY  ++  +  + R +     +
Sbjct: 179 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 238

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++   G  PD++ +  V+     +   E+  + F +M E    P   T++ L++ +   
Sbjct: 239 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 298

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E ++++L+ MS  G    N    N+++   C +  + +A+  ++ M + G  PD ++
Sbjct: 299 GMVERAIQVLEQMSGHG-CAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTIS 357

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+     +    + A+E++ EM      PN  T    I   C++G I++A      M 
Sbjct: 358 YTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMS 417

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E+G   N+V +N L+ GF  +  R  VD  L L       P+ ITY+T++     A  +D
Sbjct: 418 EHGCEVNIVTYNALVNGFC-VQGR--VDSALELFYSMPCKPNTITYTTLLTGLCNAERLD 474

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              E+  +M +    P+   +++L   + ++   ++A EL+  M+E G  PN++ + T++
Sbjct: 475 AAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLL 534

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G  +D + + A+E+   +  +GVSP++ T+ +++   S   +   A ++  I++  G+ 
Sbjct: 535 DGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMR 594

Query: 491 PQKSTF--LLLAEARRA 505
           P+   +  +LLA  +R 
Sbjct: 595 PKAVIYNKILLALCKRC 611



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 215/455 (47%), Gaps = 4/455 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N +   G+  +A+   N L   G +P  V+YTT+L  L   KR+  +  + +++ E  
Sbjct: 221 IINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKN 280

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + F+ ++  F   G +E A+    +M   G    T+  N +I      G+ +++ 
Sbjct: 281 CMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAF 340

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           + L+ M   G   P+  +Y  +++  C  +   +A  ++ +M      P+ VT+NT    
Sbjct: 341 QFLNNMGSYG-CSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICI 399

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             Q G  +QA  +I +M  +G + N  T   +++G+C +G++  AL    +M      PN
Sbjct: 400 LCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSALELFYSMP---CKPN 456

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +  L+ G       D   E+LA M +    P+V+T++ +++ +   G MD+  E+ +
Sbjct: 457 TITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVE 516

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + G  P+   Y+ L  G   +   E+A ELL  ++ +G  P++V +++II     + 
Sbjct: 517 QMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLSRED 576

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ AI++F  + + G+ P    +  ++    +      A +    M + G  P + T++
Sbjct: 577 RVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNELTYI 636

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
            L E        KE + +L ++ ++   N+   EE
Sbjct: 637 TLIEGLANEDFLKETRDLLRELCSRGVLNKNLLEE 671



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 176/406 (43%), Gaps = 42/406 (10%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++ +    G  PD      +I      G   +A       + SG       YNTL+ GY 
Sbjct: 65  LVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYC 124

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G+ + + +L+  M     V P+  TY  ++R  C+   + EA +++  M   G +P V
Sbjct: 125 RYGQLDAARRLIASMP----VAPDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSV 180

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTY  +  A  ++    QA EV+ EM   G  PN  T  +II+G C+EG++ +A  F   
Sbjct: 181 VTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNR 240

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           +  YG  P+ V +  ++KG       + V+E+ A M E    P+ +T+  ++  +   G 
Sbjct: 241 LSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGM 300

Query: 369 MDK---------------------------CK--------EIFDDMGKAGIKPDAHAYSI 393
           +++                           CK        +  ++MG  G  PD  +Y+ 
Sbjct: 301 VERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTT 360

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           + KG  R +  E A+ELL  M+     PN V F T I   C  G +++A  + ++M EHG
Sbjct: 361 VLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHG 420

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
              N+ T+  L+ G+       R +  L++  +    P   T+  L
Sbjct: 421 CEVNIVTYNALVNGFC---VQGRVDSALELFYSMPCKPNTITYTTL 463



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/181 (22%), Positives = 83/181 (45%), Gaps = 1/181 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           + K+    V +   L++   ++G   EA  +   ++E G  P+L+TY TLL  +T     
Sbjct: 484 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNS 543

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                ++  +  NG+ PD + ++++I   S    +EEA+  F  +++ G+ P    YN +
Sbjct: 544 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 603

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           +         + ++     M   G   PN  TY  L+    NE  + E  +++ ++ + G
Sbjct: 604 LLALCKRCNTDGAIDFFAYMVSNG-CMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662

Query: 244 M 244
           +
Sbjct: 663 V 663


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 239/506 (47%), Gaps = 41/506 (8%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A A+F  +I     PSLV ++   +A+   K+FN +     Q+E NG+  +    N
Sbjct: 58  KKDDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 117

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN F        A     K+ + G  P T+T+NTLIKG  + GK  E+V L+D M   
Sbjct: 118 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVEN 177

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +P++ TYN +V   C   + + A +++ KM    +K DV TY+TI  +  ++G  D 
Sbjct: 178 G-CQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDA 236

Query: 267 AEEVIVEMEHNGVQ-----------------------------------PNGRTCGIIIS 291
           A  +  EME  G++                                   PN  T  +++ 
Sbjct: 237 AISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLD 296

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
            + KEGK++EA    + M   G+ PN++ +N L+ G+         + +L LM   + +P
Sbjct: 297 VFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSP 356

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           D++T+++++  +     +D   ++F ++ K G+  +A  YSIL +G+ +  + + AEEL 
Sbjct: 357 DIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELF 416

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M+  G  P+V+ +  ++ G C +G +++A+E+F+ + +  +   +  + T++ G  + 
Sbjct: 417 QEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG 476

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAE 531
            +   A  +   +   GV P   T+ ++       G   EA  +L K++      +  A 
Sbjct: 477 GKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME-----EDGNAP 531

Query: 532 EDIPVESLERLYHKEATTASYPNLLQ 557
            D    +L R + ++    +   L++
Sbjct: 532 NDCTYNTLIRAHLRDGDLTASAKLIE 557



 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 237/469 (50%), Gaps = 14/469 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L   GK  EA  + + ++E G +P +VTY +++  +      +    ++ ++EE  
Sbjct: 154 LIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERN 213

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   ++ +I++    G ++ A+  F +M+  G+  +  TYN+L++G   AGK  +  
Sbjct: 214 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 273

Query: 198 KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            LL D++SRE  + PN+ T+NVL+  +  E  + EA  +  +M   G+ P+++TYNT+  
Sbjct: 274 LLLKDMVSRE--IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 331

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y       +A  ++  M  N   P+  T   +I GYC   ++ + ++  R + + G+  
Sbjct: 332 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 391

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N V +++L++GF +       +E+   M    V PDV+TY  +++     G ++K  EIF
Sbjct: 392 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 451

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           +D+ K+ +      Y+ + +G  +  + E A  L  ++   G  PNV+ +T +ISG C  
Sbjct: 452 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 511

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           GS+  A  +  KM E G +PN  T+ TL+  +        + ++++ MK+ G     S+ 
Sbjct: 512 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 571

Query: 497 -----LLLAEARRATGLTKEAKRILSK-IKNKERTNEMEAEEDIPVESL 539
                +LL+  +R T      +  LSK  K+++   E+   E I + SL
Sbjct: 572 KMVIDMLLSAMKRLT-----LRYCLSKGSKSRQDLLELSGSEKIRLSSL 615



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 96/419 (22%), Positives = 191/419 (45%), Gaps = 45/419 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T L+       +  +   +F N+ + G   + VTY+ L+       +      +  
Sbjct: 358 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 417

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G+ PD + +  +++   ++G +E+A++ F  +++S +      Y T+I+G    G
Sbjct: 418 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 477

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K E++  L   +  +G VKPN+ TY V++   C + +++EA  ++ KM   G  P+  TY
Sbjct: 478 KVEDAWNLFCSLPCKG-VKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTY 536

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS-----------GYC--KEGK 298
           NT+  A+ ++G+   + ++I EM+  G   +  +  ++I             YC  K  K
Sbjct: 537 NTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMKRLTLRYCLSKGSK 596

Query: 299 IKE--------------ALRFARTMKEYGVHPNLVIFNLLIKGFVEI-MDRDGVD-EVLA 342
            ++              +L F +      +  +L +  +  +G     ++RD       +
Sbjct: 597 SRQDLLELSGSEKIRLSSLTFVKMFPCNTITTSLNVNTIEARGMNSAELNRDLRKLRRSS 656

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
           ++K+F+ N DV    T  N   T G  D   ++  D+    +  DA  Y+  A    R +
Sbjct: 657 VLKKFK-NRDVRVLVT--NELLTWGLEDAECDLMVDLE---LPTDAVHYAHRAG---RMR 707

Query: 403 EPEK------AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            P +      AEEL   MI+ G  PN + ++++I G+C +  +D A ++ D M   G S
Sbjct: 708 RPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGFCKENRLDEANQMLDLMVTKGDS 766



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/213 (22%), Positives = 99/213 (46%), Gaps = 15/213 (7%)

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWS-TAGF---M 369
           N+     L  G V+I      D+ +AL +E    R  P ++ +S   +A + T  F   +
Sbjct: 43  NVCFRERLRSGIVDIKK----DDAIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVL 98

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D CK++  +    GI  + +  +I+   + R  +   A  +L  +++ G+ P+   F T+
Sbjct: 99  DFCKQLELN----GIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTL 154

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G   +G +  A+ + D+M E+G  P++ T+ +++ G   +     A ++L+ M+   V
Sbjct: 155 IKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNV 214

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
                T+  + ++    G    A  +  +++ K
Sbjct: 215 KADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 247


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 203/401 (50%), Gaps = 7/401 (1%)

Query: 84  ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
           + G  ++A+A+F+ +I  G  P    Y +L+     +K     + ++ ++++  +     
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            +  V+     SG+++ A +   +M  SG  P    Y TLIK +    +  +++++L  M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
             +G + P++  YN L+      K + EA + + +M  +G+KP+  TY    + Y +  E
Sbjct: 479 KEQG-IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
              A++ + EM   GV PN   C  +I+ YCK+GK+ EA    R+M + G+  +   + +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           L+ G   +   D VD+   + +E R   + PDV +Y  ++N +S  G M K   IFD+M 
Sbjct: 598 LMNG---LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
           + G+ P+   Y++L  G+ R  E EKA+ELL  M   G HPN V + TII G+C  G + 
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            A  +FD+M   G+ P+   + TL+ G        RA  I 
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 225/488 (46%), Gaps = 39/488 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  +   G    A  I   +I  G +P++V YTTL+       RF     ++ +++E G
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N++I   S++  M+EA     +M E+GL P   TY   I GY  A +   + 
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K +  M RE  V PN      L+  +C +  + EA +    M   G+  D  TY  +   
Sbjct: 543 KYVKEM-RECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNG 601

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +N + D AEE+  EM   G+ P+  + G++I+G+ K G +++A      M E G+ PN
Sbjct: 602 LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPN 661

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++I+N+L+ GF    + +   E+L  M    ++P+ +TY TI++ +  +G + +   +FD
Sbjct: 662 VIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFD 721

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKA------------------------------ 407
           +M   G+ PD+  Y+ L  G  R  + E+A                              
Sbjct: 722 EMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGK 781

Query: 408 ----EELLMTMIESGFH----PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
                E+L  +++  F     PN V +  +I   C +G+++ A E+F +M    + P + 
Sbjct: 782 TELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVI 841

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+ +L+ GY +  +      +     A G+ P    + ++  A    G+T +A  ++ ++
Sbjct: 842 TYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQM 901

Query: 520 KNKERTNE 527
             K   ++
Sbjct: 902 FAKNAVDD 909



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 196/417 (47%), Gaps = 19/417 (4%)

Query: 59  HCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT 118
            C    NK  C      T L+N   ++GK  EA + + ++++ G      TYT L+  L 
Sbjct: 550 ECGVLPNKVLC------TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
              + +    I  ++   G+ PD   +  +IN FS+ GNM++A   F +M E GLTP   
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
            YN L+ G+  +G+ E++ +LLD MS +G + PN  TY  ++  +C   ++ EA+ +  +
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKG-LHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M   G+ PD   Y T+     +  + ++A   I      G   +      +I+   K GK
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAI-TIFGTNKKGCASSTAPFNALINWVFKFGK 781

Query: 299 IK---EALR--FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
            +   E L      +   +G  PN V +N++I    +  + +   E+   M+   + P V
Sbjct: 782 TELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           ITY++++N +   G   +   +FD+   AGI+PD   YS++   +++E    KA  L+  
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900

Query: 414 M-----IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           M     ++ G   ++     ++SG+   G M+ A +V + M      P+  T   L+
Sbjct: 901 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 112/509 (22%), Positives = 193/509 (37%), Gaps = 127/509 (24%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEA-------------------------------MDTF 165
           G   D + F  + + +   G +EEA                               +D F
Sbjct: 146 GKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLF 205

Query: 166 WK----MKESGLTPTTSTYNTLIKGYGIAG----------KPEE-----------SVKLL 200
           W     M E  +     TY+ LI  +  AG          K E+           ++KL 
Sbjct: 206 WDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLK 265

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
           + M  +G V P   TY+VL+   C  K + +A +++ +M + G+  D  TY+ +     +
Sbjct: 266 ESMICKGLV-PLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLK 324

Query: 261 NGEADQAEEVIVEMEHNGVQ-----------------------------------PNGRT 285
              AD A+ ++ EM  +G+                                    P  + 
Sbjct: 325 GRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQA 384

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEY--------------------------------- 312
              +I GYC+E  +++       MK+                                  
Sbjct: 385 YASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMI 444

Query: 313 --GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PN+VI+  LIK F++         VL  MKE  + PD+  Y++++   S A  MD
Sbjct: 445 ASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMD 504

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +    +M + G+KP+A  Y     GY+   E   A++ +  M E G  PN V+ T +I
Sbjct: 505 EARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLI 564

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           + +C  G +  A   +  M + G+  + KT+  LM G  +  +   AEEI + M+  G+ 
Sbjct: 565 NEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIA 624

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
           P   ++ +L       G  ++A  I  ++
Sbjct: 625 PDVFSYGVLINGFSKLGNMQKASSIFDEM 653



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 148/332 (44%), Gaps = 42/332 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L+N   + G  Q+A +IF+ ++E G  P+++ Y  LL              ++ 
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY---- 187
           ++   G+ P+++ +  +I+ + +SG++ EA   F +MK  GL P +  Y TL+ G     
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746

Query: 188 --------------GIA----------------GKPEESVKLLDLM---SREGNVKPNLR 214
                         G A                GK E   ++L+ +   S +   KPN  
Sbjct: 747 DVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TYN+++   C E N+  A  + H+M  + + P V+TY ++   Y + G   +   V  E 
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEAL-----RFARTMKEYGVHPNLVIFNLLIKGFV 329
              G++P+     +II+ + KEG   +AL      FA+   + G   ++     L+ GF 
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           ++ + +  ++V+  M   +  PD  T   ++N
Sbjct: 927 KVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 103/267 (38%), Gaps = 56/267 (20%)

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL----VIFNLLI----- 325
           E  G   +G   GI+  GY  +G I+EA+    +     + P L    V+ + L+     
Sbjct: 143 EFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL 202

Query: 326 -------KGFVE---IMD-----------------RDGVDEVLALMKEFR---------- 348
                  KG VE   + D                 + G D +    KEFR          
Sbjct: 203 DLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGAL 262

Query: 349 ----------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
                     + P   TY  +++       ++  K +  +M   G+  D H YS+L  G 
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           ++ +  + A+ L+  M+  G +    ++   I     +G M++A  +FD M   G+ P  
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMK 485
           + + +L+ GY   +   +  E+L  MK
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMK 409


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 216/419 (51%), Gaps = 1/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N+   RG+  +A A FN +IE G  P++VT+ T++ A   +        +   ++E G
Sbjct: 307 VINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMG 366

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P++I +N ++N + +   +++A   + +M++ G+ P   T+N L+ G+   G+ E+  
Sbjct: 367 FSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGD 426

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL  +S  G + P+   +++ V   C    + EA   +  M   G+ P ++ +N++  A
Sbjct: 427 RLLKDISVLG-LLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAA 485

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y+Q G  D+A E    M H G+ P+  TC  ++ G    G+++EA      M E G+  N
Sbjct: 486 YSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVN 545

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + F +L+  F +  D  G   +   M+   + PDV+ +S  ++  S  G +++   +F 
Sbjct: 546 NMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFL 605

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M + G+ P+  AY+ L  G+ +  +  +A +L   M   G  P++     II G C  G
Sbjct: 606 EMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQG 665

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            M  AI VF  M + G+SP++ T+ TL+ GY +A     A+ ++  M A G +P  +T+
Sbjct: 666 RMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSNPDLTTY 724



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 203/409 (49%), Gaps = 16/409 (3%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+ ++   +  ++   G  P    +   ++ L    R +     +  + E G+ P  I F
Sbjct: 420 GREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAF 479

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N+VI A+S++G  ++A + +  M   GLTP+ ST ++L+ G  I G+ +E+ +L+  M  
Sbjct: 480 NSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIE 539

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G +  N   + VL+  +    ++  A ++  +M   G+ PDVV ++      ++ G  +
Sbjct: 540 KG-LSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVE 598

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  V +EM   G+ PN      +I G+CK GK+ EAL+  + M+  G+ P++   N++I
Sbjct: 599 EAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMII 658

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G  +         V   M +  ++PD+ITY+T++N +  A  M     + + M  +G  
Sbjct: 659 GGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAFDMVNADNLVNRMYASGSN 718

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   Y+I   G+   +   +A  +L  ++ +G  PN V + ++++G CSD  +DRA+ +
Sbjct: 719 PDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSD-ILDRAMIL 777

Query: 446 FDKMCEHGVSPNLKTF--------------ETLMWGYSEARQPWRAEEI 480
             ++ +    PN+ T                TLMWG+  +  P+  +EI
Sbjct: 778 TARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEI 826



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 107/456 (23%), Positives = 190/456 (41%), Gaps = 36/456 (7%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           +  LM + +      +A  I   + E G +PS      L   L     + ++  +   V 
Sbjct: 199 LDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVI 258

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G  P    F+ +I  F   G +         M +    P    YN +I    I G+  
Sbjct: 259 RRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTS 318

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           +++   +LM   G   P + T+N ++ A+C E N+ EA  +   +   G  P+ + YNT+
Sbjct: 319 DALAWFNLMIERG-CNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTL 377

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY--------------------- 293
              Y +  E DQA  +  EM   G+ P+G T  I++SG+                     
Sbjct: 378 MNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGL 437

Query: 294 --------------CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
                         C  G++ EA+ F   M E G+ P+++ FN +I  + +    D   E
Sbjct: 438 LPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFE 497

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
              LM  F + P   T S+++   S  G + +  E+   M + G+  +  A+++L   + 
Sbjct: 498 AYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFF 557

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +  +   A+ L   M   G  P+VV F+  I G    G ++ A  VF +M   G+ PN  
Sbjct: 558 KRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNF 617

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            + +L+ G+ +  +   A ++ ++M+  G+ P   T
Sbjct: 618 AYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFT 653



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 116/240 (48%), Gaps = 2/240 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + +  ++ L ++G  +EA  +F  ++  G  P+   Y +L+       + N    +  
Sbjct: 581 VVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEK 640

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ PD    N +I    + G M  A++ F  M ++GL+P   TYNTLI GY  A 
Sbjct: 641 VMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYCKAF 700

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               +  L++ M   G+  P+L TYN+ +  +C+ + +  A  ++ ++ ++G+ P+ VTY
Sbjct: 701 DMVNADNLVNRMYASGS-NPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTY 759

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++      +   D+A  +   +      PN  T  +++S + K+G  +  L +   + E
Sbjct: 760 NSMLNGVCSD-ILDRAMILTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSE 818



 Score = 45.8 bits (107), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 66/169 (39%)

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           D     ++M A+  A    +  EI   M + G++P A   +IL K  +R  +     +L 
Sbjct: 195 DFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLF 254

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             +I  G  P    F+ II G+C  G +     +   M +    PN   +  ++      
Sbjct: 255 KDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIR 314

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            +   A     +M   G +P   TF  +  A    G   EA+++   +K
Sbjct: 315 GRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLK 363


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 203/401 (50%), Gaps = 7/401 (1%)

Query: 84  ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
           + G  ++A+A+F+ +I  G  P    Y +L+     +K     + ++ ++++  +     
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            +  V+     SG+++ A +   +M  SG  P    Y TLIK +    +  +++++L  M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
             +G + P++  YN L+      K + EA + + +M  +G+KP+  TY    + Y +  E
Sbjct: 479 KEQG-IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
              A++ + EM   GV PN   C  +I+ YCK+GK+ EA    R+M + G+  +   + +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTV 597

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           L+ G   +   D VD+   + +E R   + PDV +Y  ++N +S  G M K   IFD+M 
Sbjct: 598 LMNG---LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
           + G+ P+   Y++L  G+ R  E EKA+ELL  M   G HPN V + TII G+C  G + 
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            A  +FD+M   G+ P+   + TL+ G        RA  I 
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 222/480 (46%), Gaps = 39/480 (8%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G    A  I   +I  G +P++V YTTL+       RF     ++ +++E G+ PD   +
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N++I   S++  M+EA     +M E+GL P   TY   I GY  A +   + K +  M R
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM-R 549

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           E  V PN      L+  +C +  + EA +    M   G+  D  TY  +     +N + D
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            AEE+  EM   G+ P+  + G++I+G+ K G +++A      M E G+ PN++I+N+L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF    + +   E+L  M    ++P+ +TY TI++ +  +G + +   +FD+M   G+ 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 386 PDAHAYSILAKGYVREQEPEKA----------------------------------EELL 411
           PD+  Y+ L  G  R  + E+A                                   E+L
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789

Query: 412 MTMIESGFH----PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +++  F     PN V +  +I   C +G+++ A E+F +M    + P + T+ +L+ G
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNE 527
           Y +  +      +     A G+ P    + ++  A    G+T +A  ++ ++  K   ++
Sbjct: 850 YDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 196/417 (47%), Gaps = 19/417 (4%)

Query: 59  HCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT 118
            C    NK  C      T L+N   ++GK  EA + + ++++ G      TYT L+  L 
Sbjct: 550 ECGVLPNKVLC------TGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
              + +    I  ++   G+ PD   +  +IN FS+ GNM++A   F +M E GLTP   
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
            YN L+ G+  +G+ E++ +LLD MS +G + PN  TY  ++  +C   ++ EA+ +  +
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKG-LHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M   G+ PD   Y T+     +  + ++A   I      G   +      +I+   K GK
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERAI-TIFGTNKKGCASSTAPFNALINWVFKFGK 781

Query: 299 IK---EALR--FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
            +   E L      +   +G  PN V +N++I    +  + +   E+   M+   + P V
Sbjct: 782 TELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           ITY++++N +   G   +   +FD+   AGI+PD   YS++   +++E    KA  L+  
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900

Query: 414 M-----IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           M     ++ G   ++     ++SG+   G M+ A +V + M      P+  T   L+
Sbjct: 901 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 148/332 (44%), Gaps = 42/332 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L+N   + G  Q+A +IF+ ++E G  P+++ Y  LL              ++ 
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY---- 187
           ++   G+ P+++ +  +I+ + +SG++ EA   F +MK  GL P +  Y TL+ G     
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746

Query: 188 --------------GIA----------------GKPEESVKLLDLM---SREGNVKPNLR 214
                         G A                GK E   ++L+ +   S +   KPN  
Sbjct: 747 DVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TYN+++   C E N+  A  + H+M  + + P V+TY ++   Y + G   +   V  E 
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEAL-----RFARTMKEYGVHPNLVIFNLLIKGFV 329
              G++P+     +II+ + KEG   +AL      FA+   + G   ++     L+ GF 
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           ++ + +  ++V+  M   +  PD  T   ++N
Sbjct: 927 KVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 150/350 (42%), Gaps = 26/350 (7%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           +  L  GY      EE+V +    S    + P L    VL+ A      +   W+V   M
Sbjct: 154 FGILFDGYIAKEYIEEAVFVFS-SSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH---------------------NG 278
               +  DV TY+ +  A+ + G     ++V+ + E                       G
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKG 272

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           + P   T  ++I G CK  ++++A      M   GV  +   ++LLI G ++  + D   
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            ++  M    +N     Y   +   S  G M+K K +FD M  +G+ P A AY+ L +GY
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            RE+   +  ELL+ M +     +   + T++ G CS G +D A  +  +M   G  PN+
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ----KSTFLLLAEARR 504
             + TL+  + +  +   A  +L+ MK  G+ P      S  + L++A+R
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 212/419 (50%), Gaps = 10/419 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++   +E+G  + A  +F+N+ + G  PSL +  +LL  L      ++ H +  Q+   G
Sbjct: 128 ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVG 187

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD    + ++NAF + G ++EA     KM+  G+ P   TY++LI GY   G  E + 
Sbjct: 188 IVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAK 247

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA-ASGMKPDVVTYNTIAT 256
            +L  MS +G V  N+ TY +L++ +C +  + EA  V+  M   + + PD   Y  +  
Sbjct: 248 GVLKFMSEKG-VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLID 306

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y + G+ D A  ++ EM   G++ N   C  +I+GYCK G+I EA      M ++ + P
Sbjct: 307 GYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKP 366

Query: 317 NLVIFNLLIKGFVEIMDRDG-VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           +   +N L+ G+     R+G   E   L   M +  + P V+TY+T++      G  D  
Sbjct: 367 DSYSYNTLLDGYC----REGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 422

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            +I+  M K G+ PD   YS L  G  + +  E A  L   ++  GF  + + F T+ISG
Sbjct: 423 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISG 482

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            C  G M  A E+FDKM + G SP+  T+ TL+ GY +A    +A ++   M+   + P
Sbjct: 483 LCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISP 541



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 126/497 (25%), Positives = 219/497 (44%), Gaps = 70/497 (14%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++RS   L+N+L++ G+   A  ++  +I  G  P +   + ++ A     + +     +
Sbjct: 156 SLRSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFV 215

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++E  G++P+ + ++++IN +   G++E A      M E G++    TY  LIKGY   
Sbjct: 216 KKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQ 275

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K +E+ K+L  M  E  + P+ R Y VL+  +C    I +A  ++ +M   G+K ++  
Sbjct: 276 CKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFI 335

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            N++   Y + GE  +AE VI  M    ++P+  +   ++ GYC+EG   EA      M 
Sbjct: 336 CNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKML 395

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA-------- 362
           + G+ P ++ +N L+KG   +   D   ++  LM +  V PD + YST+++         
Sbjct: 396 QEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFE 455

Query: 363 -----WS---TAGF-------------------MDKCKEIFDDMGKAGIKPDAHAYSILA 395
                W      GF                   M + +EIFD M   G  PD   Y  L 
Sbjct: 456 GASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLI 515

Query: 396 KGYVR--------------EQEP---------------------EKAEELLMTMIESGFH 420
            GY +              E+EP                      +  +LL  M   G  
Sbjct: 516 DGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLT 575

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN+V +  +I GWC +G +D+A   + +M E+G+S N+    T++ G     +   A  +
Sbjct: 576 PNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLL 635

Query: 481 LQIMKAFGVHPQKSTFL 497
           +Q M   G  P    FL
Sbjct: 636 MQKMVDHGFFPDHECFL 652



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/421 (27%), Positives = 199/421 (47%), Gaps = 33/421 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+  L   G   +A  I++ +++ G  P  V Y+TLL  L   + F    ++ 
Sbjct: 402 TVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLW 461

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   G     I FN +I+   + G M EA + F KMK+ G +P   TY TLI GY  A
Sbjct: 462 KDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKA 521

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
               ++ K+   M RE  + P++  YN L+      + + E  +++ +M   G+ P++VT
Sbjct: 522 SNVGQAFKVKGAMERE-PISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVT 580

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +   + + G  D+A     EM  NG+  N   C  ++SG  + G+I EA    + M 
Sbjct: 581 YGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 640

Query: 311 EYGVHP--------------------------------NLVIFNLLIKGFVEIMDRDGVD 338
           ++G  P                                N +++N+ I G  +    D   
Sbjct: 641 DHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDAR 700

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
              +++      PD  TY T+++ +S AG +D+   + D+M + G+ P+   Y+ L  G 
Sbjct: 701 RFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGL 760

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            + +  ++A+ L   + + G  PNVV + T+I G+C  G+MD A ++ DKM E G+SP++
Sbjct: 761 CKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSI 820

Query: 459 K 459
           +
Sbjct: 821 Q 821



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 129/562 (22%), Positives = 243/562 (43%), Gaps = 63/562 (11%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+   L++     GK  +A  + + ++  G K +L    +L+     +   +    ++++
Sbjct: 299 RAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITR 358

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + +  + PDS  +N +++ +   G+  EA +   KM + G+ PT  TYNTL+KG    G 
Sbjct: 359 MVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGA 418

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            ++++++  LM + G V P+   Y+ L+      +N   A  +   + A G     +T+N
Sbjct: 419 FDDALQIWHLMMKRG-VAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFN 477

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+ +   + G+  +AEE+  +M+  G  P+G T   +I GYCK   + +A +    M+  
Sbjct: 478 TMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMERE 537

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
            + P++ ++N LI G  +      V ++L  M    + P+++TY  +++ W   G +DK 
Sbjct: 538 PISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKA 597

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP----------- 421
              + +M + G+  +    S +  G  R    ++A  L+  M++ GF P           
Sbjct: 598 FSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIR 657

Query: 422 ---------------------NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
                                N +++   I+G C  G +D A   F  +   G  P+  T
Sbjct: 658 YAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFT 717

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           + TL+ GYS A     A  +   M   G+ P   T+  L                L K +
Sbjct: 718 YCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALING-------------LCKSE 764

Query: 521 NKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQK--GSAAALK-KGR 577
           N +R               +RL+HK      +PN++    ++    K     AA K K +
Sbjct: 765 NVDRA--------------QRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDK 810

Query: 578 MLLRDADSSLECSWFATTSMYL 599
           M+      S++C+   + SM+L
Sbjct: 811 MIEEGISPSIQCNLLESVSMWL 832



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 186/378 (49%), Gaps = 2/378 (0%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           F+ ++  + E G  + A+  F  M + G  P+  + N+L+      G+   +  +   M 
Sbjct: 125 FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMI 184

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G V P++   +++V A+C +  + EA   + KM   G++P++VTY+++   Y   G+ 
Sbjct: 185 RVGIV-PDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDV 243

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE-YGVHPNLVIFNL 323
           + A+ V+  M   GV  N  T  ++I GYCK+ K+ EA +  R M+E   + P+   + +
Sbjct: 244 EAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGV 303

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           LI G+      D    +L  M    +  ++   ++++N +   G + + + +   M    
Sbjct: 304 LIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWN 363

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           +KPD+++Y+ L  GY RE    +A  L   M++ G  P V+ + T++ G C  G+ D A+
Sbjct: 364 LKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDAL 423

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           +++  M + GV+P+   + TL+ G  +      A  + + + A G    + TF  +    
Sbjct: 424 QIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGL 483

Query: 504 RATGLTKEAKRILSKIKN 521
              G   EA+ I  K+K+
Sbjct: 484 CKMGKMVEAEEIFDKMKD 501


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 229/443 (51%), Gaps = 16/443 (3%)

Query: 88  PQEAQAIFNNLIEG-GHK---PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
           P  A A+FN +  G G +   P++ TY+ L+      +R +   +    +   GM  D I
Sbjct: 80  PALAVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVI 139

Query: 144 FFNAVINAFSESGNMEEAMDT-FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
             ++++    ++   +EA+D  F +M E G  P   +Y+T++K     G+ + ++ +L +
Sbjct: 140 VVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRM 199

Query: 203 MSREGNVKP-NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
             ++G   P N+  Y+ +V     E  + EA ++ H+M   G+ P+VVTYN++  A  + 
Sbjct: 200 AVKQGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKA 259

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
              D+A+ ++ +M  NGVQP+  T   +I GY   G+ K+A+R  + M   GV PN V  
Sbjct: 260 RAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTC 319

Query: 322 NLLI-----KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +  +      G +E   R+  D +LA  K  ++N  +I+YST+++ ++TAG +     +F
Sbjct: 320 STFVAFLCKHGRIE-EAREFFDSMLA--KGHKLN--IISYSTLLHGYATAGCLVDMSNLF 374

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           + M + GI P+ H ++IL  GY +     +A  +   M + G +P+V+ +  +I  +C  
Sbjct: 375 NLMVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRM 434

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           GSMD A++ F+ M + GV PN   ++ L+ G+       +AEE++  ++  G+ P   +F
Sbjct: 435 GSMDDAMDKFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSF 494

Query: 497 LLLAEARRATGLTKEAKRILSKI 519
             L       G   EA+RI   I
Sbjct: 495 ASLINHLCKEGRVFEAQRIFDMI 517



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/494 (24%), Positives = 242/494 (48%), Gaps = 15/494 (3%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +++ L + GK  EA  +F+ + + G  P++VTY +++ AL   +  +    I+ Q+  
Sbjct: 215 STVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVG 274

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           NG+ PD++ +N +I+ +S  G  ++A+  F +M   G+ P T T +T +      G+ EE
Sbjct: 275 NGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEE 334

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +  D M  +G+ K N+ +Y+ L+  +     + +  N+ + M   G+ P+   +N + 
Sbjct: 335 AREFFDSMLAKGH-KLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILV 393

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             YA+ G   +A  +  +M+  G+ P+  T   +I  +C+ G + +A+     M + GV 
Sbjct: 394 NGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVE 453

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN  ++  LI+GF    D    +E++  ++   + P ++++++++N     G + + + I
Sbjct: 454 PNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRI 513

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           FD + + G K D + ++ L  GY    +  +A  +   M+  G  P++V + T+++G C 
Sbjct: 514 FDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCK 573

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G +D  + +F ++   GV P   T+  ++ G   A +   A+E+ Q M   G+     T
Sbjct: 574 NGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPT 633

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESL--------ERLYHKEA 547
           + +L         T+EA  +  K+        M  + DI + ++         R    E 
Sbjct: 634 YSILLTGLCRNNCTEEAITVFQKL------CAMNVKFDIVILNIMISKMFKARRREEAEG 687

Query: 548 TTASYPNLLQIPNV 561
             AS P+   +P V
Sbjct: 688 LFASIPDYGLVPTV 701



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/414 (24%), Positives = 201/414 (48%), Gaps = 9/414 (2%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           L + G+ +EA+  F++++  GHK ++++Y+TLL           + ++ + +  +G+ P+
Sbjct: 326 LCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPN 385

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
              FN ++N +++ G + EAM  F  M++ GL P   TY  +I  +   G  ++++   +
Sbjct: 386 QHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFN 445

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M  +G V+PN   Y  L++ +C   ++ +A  +++++   G+ P ++++ ++     + 
Sbjct: 446 HMIDKG-VEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKE 504

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           G   +A+ +   +   G + +      +I GYC  GK+ EA R    M   G+ P++V +
Sbjct: 505 GRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTY 564

Query: 322 NLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             L+ G      ++G +D+ L L +E     V P   TY  I++    AG     KE+F 
Sbjct: 565 GTLVNGCC----KNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQ 620

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M ++GI      YSIL  G  R    E+A  +   +       ++VI   +IS      
Sbjct: 621 EMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKAR 680

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             + A  +F  + ++G+ P ++T+  +M    +      AE +  +M   G+ P
Sbjct: 681 RREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSP 734



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 85/339 (25%), Positives = 155/339 (45%), Gaps = 12/339 (3%)

Query: 193 PEESVKLLDLMSREGNVK---PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           P  +V L + MS     +   P + TY++L+   C  + +  A+     +   GMK DV+
Sbjct: 80  PALAVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVI 139

Query: 250 TYNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR- 307
             +++          D+A +V+   M   G  P+  +   ++   C +G+ + AL   R 
Sbjct: 140 VVSSLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRM 199

Query: 308 TMKEYGVHP-NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAW 363
            +K+ G  P N+V+++ ++ G   +     V E   L  E     V P+V+TY+++++A 
Sbjct: 200 AVKQGGGCPCNVVVYSTVVHG---LFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHAL 256

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
             A  +DK + I   M   G++PD   Y+ L  GY    + ++A  +   M   G  PN 
Sbjct: 257 CKARAVDKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNT 316

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           V  +T ++  C  G ++ A E FD M   G   N+ ++ TL+ GY+ A        +  +
Sbjct: 317 VTCSTFVAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNL 376

Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           M   G+ P +  F +L       G+ +EA  I   ++ +
Sbjct: 377 MVRDGIVPNQHVFNILVNGYAKCGMVREAMFIFEDMQKR 415



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/266 (23%), Positives = 127/266 (47%), Gaps = 1/266 (0%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           NK     + S   L+N L + G+  EAQ IF+ +I  G K  +  +T+L+    +  + +
Sbjct: 484 NKGLGPCILSFASLINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMS 543

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
               +   +   G++PD + +  ++N   ++G +++ +  F ++   G+ PTT TY  ++
Sbjct: 544 EAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIIL 603

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G   AG+   + ++   M   G +   + TY++L+   C      EA  V  K+ A  +
Sbjct: 604 DGLFHAGRTAAAKEMFQEMIESG-IAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNV 662

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           K D+V  N + +   +    ++AE +   +   G+ P  +T  I++    KEG ++EA  
Sbjct: 663 KFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEG 722

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVE 330
               M + G+ P     N++++  +E
Sbjct: 723 VFSVMLKSGLSPTSHFINVIVRTLLE 748



 Score = 69.3 bits (168), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 57/266 (21%), Positives = 108/266 (40%), Gaps = 34/266 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V   T L++     GK  EA  + + ++  G +P +VTY TL+       R +    +  
Sbjct: 526 VNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKNGRIDDGLILFR 585

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ P +  +  +++    +G    A + F +M ESG+  T  TY+ L+ G     
Sbjct: 586 ELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTYSILLTGLCRNN 645

Query: 192 KPEESVK---------------LLDLM-----------SREG--------NVKPNLRTYN 217
             EE++                +L++M             EG         + P ++TY 
Sbjct: 646 CTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPDYGLVPTVQTYT 705

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +++     E ++ EA  V   M  SG+ P     N I     + GE  +A   +  ++  
Sbjct: 706 IMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGK 765

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEAL 303
            +     T  +++S +  +GK +E L
Sbjct: 766 SILFEASTASMLLSLFSCKGKHREHL 791



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 26/123 (21%), Positives = 59/123 (47%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ + +  + +EA+ +F ++ + G  P++ TYT ++  L  +        + S + ++G
Sbjct: 672 MISKMFKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSG 731

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P S F N ++    E G + +A     ++    +    ST + L+  +   GK  E +
Sbjct: 732 LSPTSHFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHL 791

Query: 198 KLL 200
            LL
Sbjct: 792 NLL 794


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  205 bits (522), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 224/446 (50%), Gaps = 2/446 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEG-GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           ++ ++ ++G   EA  +  +L+   G +P +V+Y  +L  L + +R+  +  +M ++   
Sbjct: 187 VLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAA 246

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  P+ + F+ +I     +G  E   +   +M E G  P    Y T+I G     + E +
Sbjct: 247 GCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVA 306

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
             +L+ M   G + PN+  YN L++  C+     EA  ++ +M       D VT+N +  
Sbjct: 307 RGILNRMPSYG-LSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVD 365

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              QNG  D+  EV+ +M  +G  P+  T   +I+G+CKEG I EA+   R+M   G  P
Sbjct: 366 FLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRP 425

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N V + +++KG          +E+++ M +    P+ +T++T++N     G +++  E+ 
Sbjct: 426 NTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELL 485

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             M   G  PD  +YS +  G  +    ++A ELL  M++ G  PN +I+++I S    +
Sbjct: 486 KQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGE 545

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +++ I++F+ + +  V  +   +  ++    +  +  RA E L  M + G  P +ST+
Sbjct: 546 GRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTY 605

Query: 497 LLLAEARRATGLTKEAKRILSKIKNK 522
            +L     + G  KEA+ IL+++ +K
Sbjct: 606 TILIRGLASEGFVKEAQEILTELCSK 631



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 211/453 (46%), Gaps = 37/453 (8%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P+  TY  L+ AL  + R     +++  +   G  P    ++  + A   +     A+  
Sbjct: 109 PNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAVGV 168

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAW 223
              +   G        N +++     G  +E+V+LL DL+   G  +P++ +YN ++R  
Sbjct: 169 LRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFG-CEPDVVSYNAVLRGL 227

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C  +      ++M +M A+G  P++VT++T+     +NG  ++  EV  +M  +G  P+ 
Sbjct: 228 CMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDV 287

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV-------------E 330
           R    II G CKE +++ A      M  YG+ PN+V +N L+KG               E
Sbjct: 288 RMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAE 347

Query: 331 IMDRDG----------------------VDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           + D+D                       V EVL  M E    PDVITY+T++N +   G 
Sbjct: 348 MFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGL 407

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D+   +   M   G +P+  +Y+I+ KG    +    AEEL+  MI+ G  PN V F T
Sbjct: 408 IDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNT 467

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I+  C  G +++AIE+  +M  +G SP+L ++ T++ G  +A     A E+L +M   G
Sbjct: 468 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKG 527

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           + P    +  +A A    G   +  ++   I++
Sbjct: 528 MSPNTIIYSSIASALSGEGRINKVIQMFENIQD 560



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 189/396 (47%), Gaps = 34/396 (8%)

Query: 92  QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINA 151
           Q +   ++  G  P++VT++TL+  L     F  +H + +Q+ E+G  PD   +  +I+ 
Sbjct: 237 QDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDG 296

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL----------- 200
             +   +E A     +M   GL+P    YNTL+KG   A + EE+  LL           
Sbjct: 297 VCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLD 356

Query: 201 --------DLMSREGNVK---------------PNLRTYNVLVRAWCNEKNITEAWNVMH 237
                   D + + G V                P++ TY  ++  +C E  I EA  ++ 
Sbjct: 357 DVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLR 416

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
            MAA G +P+ V+Y  +            AEE++ +M   G  PN  T   +I+  CK+G
Sbjct: 417 SMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKG 476

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
            +++A+   + M   G  P+L+ ++ +I G  +  + D   E+L +M +  ++P+ I YS
Sbjct: 477 LVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYS 536

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           +I +A S  G ++K  ++F+++    ++ DA  Y+ +     +  E ++A E L  M+ S
Sbjct: 537 SIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSS 596

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           G  PN   +T +I G  S+G +  A E+  ++C  G
Sbjct: 597 GCVPNESTYTILIRGLASEGFVKEAQEILTELCSKG 632



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 89/356 (25%), Positives = 155/356 (43%), Gaps = 40/356 (11%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           YN ++ GY  AG+   + +L   +     V PN  TY  LVRA C    I +A  V+  M
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVP----VAPNAYTYFPLVRALCARGRIADALAVLDDM 137

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
           A  G  P    Y+    A  +      A  V+ ++   G   +   C +++   C +G +
Sbjct: 138 ARRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPV 197

Query: 300 KEALRFAR-TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
            EA+R  R  +  +G  P++V +N +++G         V +++  M      P+++T+ST
Sbjct: 198 DEAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFST 257

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++      G  ++  E+   M + G  PD   Y+ +  G  +E+  E A  +L  M   G
Sbjct: 258 LIGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYG 317

Query: 419 FHPNVVIFTTIISGWCS-----------------------------------DGSMDRAI 443
             PNVV + T++ G CS                                   +G +DR I
Sbjct: 318 LSPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVI 377

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           EV ++M EHG  P++ T+ T++ G+ +      A  +L+ M A G  P   ++ ++
Sbjct: 378 EVLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIV 433



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 125/231 (54%), Gaps = 1/231 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T ++N   + G   EA  +  ++   G +P+ V+YT +L  L   +R+     +MS
Sbjct: 392 VITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMS 451

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G  P+ + FN +IN   + G +E+A++   +M  +G +P   +Y+T+I G G AG
Sbjct: 452 QMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAG 511

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+++LL++M ++G + PN   Y+ +  A   E  I +   +   +  + ++ D V Y
Sbjct: 512 NTDEALELLNVMVKKG-MSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLY 570

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           N + ++  + GE D+A E +  M  +G  PN  T  I+I G   EG +KEA
Sbjct: 571 NAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEA 621



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 127/274 (46%), Gaps = 4/274 (1%)

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +   Y + G+   A  +   +    V PN  T   ++   C  G+I +AL     M 
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVP---VAPNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  P   ++++ ++         G   VL  +       DV   + ++ A    G +D
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 371 KCKEIFDDMGKA-GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +   +  D+  + G +PD  +Y+ + +G    +     ++L+  M+ +G  PN+V F+T+
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I   C +G  +R  EV  +M EHG +P+++ + T++ G  +  +   A  IL  M ++G+
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            P    +  L +   +    +EA+ +L+++ +K+
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKD 352



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 77/140 (55%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + +++ L + G   EA  + N +++ G  P+ + Y+++ +AL+ + R N +  +   +
Sbjct: 499 SYSTVIDGLGKAGNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENI 558

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++  +  D++ +NAVI++  + G  + A++    M  SG  P  STY  LI+G    G  
Sbjct: 559 QDTTVRSDAVLYNAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFV 618

Query: 194 EESVKLLDLMSREGNVKPNL 213
           +E+ ++L  +  +G ++ +L
Sbjct: 619 KEAQEILTELCSKGALRKHL 638


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 225/434 (51%), Gaps = 1/434 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A  +F ++I+    P+++ +  L +A+   K++  + ++  Q+E  G+       +
Sbjct: 68  KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN F     +  A  T  K+ + G  P T  +NTL+ G  +  +  E+++L+D M   
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G+ KP L T N LV   C    +++A  ++ +M  +G +P+ VTY  +     ++G+   
Sbjct: 188 GH-KPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTAL 246

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A E++ +ME   ++ +     III G CK+G +  A      M+  G   +++ +N LI 
Sbjct: 247 AMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIG 306

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GF      D   ++L  M + +++P+V+T+S +++++   G + +  ++  +M + GI P
Sbjct: 307 GFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAP 366

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           +   Y+ L  G+ +E   E+A +++  MI  G  P+++ F  +I+G+C    +D  +E+F
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELF 426

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            +M   GV  N  T+ TL+ G+ ++ +   A+++ Q M +  V P   ++ +L +     
Sbjct: 427 REMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDN 486

Query: 507 GLTKEAKRILSKIK 520
           G  ++A  I  KI+
Sbjct: 487 GELEKALEIFGKIE 500



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 220/426 (51%), Gaps = 3/426 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ ++  L+N L   GK  +A  + + ++E G +P+ VTY  +L  +    +      ++
Sbjct: 192 TLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELL 251

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++EE  +  D++ ++ +I+   + G+++ A + F +M+  G      TYNTLI G+  A
Sbjct: 252 RKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNA 311

Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           G+ ++  KLL D++ R+  + PN+ T++VL+ ++  E  + EA  ++ +M   G+ P+ +
Sbjct: 312 GRWDDGAKLLRDMIKRK--ISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTI 369

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN++   + +    ++A +++  M   G  P+  T  I+I+GYCK  +I + L   R M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              GV  N V +N L++GF +    +   ++   M   RV PD+++Y  +++     G +
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +K  EIF  + K+ ++ D   Y I+  G     + + A +L  ++   G   +   +  +
Sbjct: 490 EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIM 549

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           IS  C   S+ +A  +F KM E G +P+  T+  L+  +        A E+++ MK+ G 
Sbjct: 550 ISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF 609

Query: 490 HPQKST 495
               ST
Sbjct: 610 PADVST 615



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/514 (23%), Positives = 257/514 (50%), Gaps = 14/514 (2%)

Query: 44  QLYSNSKPTDSQPQTHCSFCMNKES---CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIE 100
           +L+S    T  Q +   + C   ES     ++ +++ ++N      K   A +    +++
Sbjct: 93  RLFSAIAKT-KQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMK 151

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
            G++P  V + TLL  L ++ R +    ++ ++ E G  P  I  N ++N    +G + +
Sbjct: 152 LGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSD 211

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A+    +M E+G  P   TY  ++     +G+   +++LL  M  E N+K +   Y++++
Sbjct: 212 AVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME-ERNIKLDAVKYSIII 270

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
              C + ++  A+N+ ++M   G K D++TYNT+   +   G  D   +++ +M    + 
Sbjct: 271 DGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKIS 330

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           PN  T  ++I  + KEGK++EA +  + M + G+ PN + +N LI GF +    +   ++
Sbjct: 331 PNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQM 390

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           + LM     +PD++T++ ++N +  A  +D   E+F +M   G+  +   Y+ L +G+ +
Sbjct: 391 VDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQ 450

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
             + E A++L   M+     P++V +  ++ G C +G +++A+E+F K+ +  +  ++  
Sbjct: 451 SGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGI 510

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-LLLAEARRATGLTKEAKRILSKI 519
           +  ++ G   A +   A ++   +   GV      + ++++E  R   L+K      + I
Sbjct: 511 YMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSK------ADI 564

Query: 520 KNKERTNEMEAEEDIPVESLER--LYHKEATTAS 551
             ++ T E  A +++    L R  L   +ATTA+
Sbjct: 565 LFRKMTEEGHAPDELTYNILIRAHLGDDDATTAA 598


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 225/411 (54%), Gaps = 1/411 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   L+N L   G+  EA    + ++  G++P++ T+T ++  L    + ++    M
Sbjct: 173 SIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWM 232

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ E   +P+ + ++ +I++  ++  + EA+D F+ M+  G++PT  TYN+LI G   +
Sbjct: 233 KKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNS 292

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ +++  L   M  E N+KP++ T+++LV A C E  + EA +V  KM    M+PD+VT
Sbjct: 293 GQWKQASILFKEM-LEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVT 351

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+++     ++    ++  ++ EM    ++P+  T  I +  +CK+G + EA      M 
Sbjct: 352 YSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMI 411

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G+ PN+V +N L+ G+      D   +V  +M      PDV++Y+ ++  +  +  +D
Sbjct: 412 ERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERID 471

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + K++FD+M   G+ P++  ++ L  G  +   P  A+EL   M   G  P+++ ++T++
Sbjct: 472 EAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLL 531

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           SG+C  G +D A+ +F+ + +  + PN    + L+ G  +A +   A+E+ 
Sbjct: 532 SGFCKHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELF 582



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 229/503 (45%), Gaps = 69/503 (13%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A A FN ++     P +  +  LLAAL   K ++S+ SI  ++E  G+         +I
Sbjct: 87  DALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRKMEFFGVSCSVYTLTILI 146

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD-LMSR--- 205
           N       +        K+ + G  P+  T+NTLI G  I G+  E+++ LD +MSR   
Sbjct: 147 NCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQ 206

Query: 206 ------------------------------EGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
                                         E + +P + +Y++++ + C  + + EA ++
Sbjct: 207 PTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDL 266

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
            + M + G+ P VVTYN++      +G+  QA  +  EM    ++P+  T  I++   CK
Sbjct: 267 FYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCK 326

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKG---------------------------- 327
           EG + EAL     M +  + P++V ++ LI G                            
Sbjct: 327 EGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVT 386

Query: 328 ---FVEIMDRDGV----DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
              +V++  + G+      ++ LM E  + P+V+TY+++M+ +     MD+ +++FD M 
Sbjct: 387 FSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDIMV 446

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             G  PD  +Y+IL KGY + +  ++A++L   M   G  PN +  TT+ISG C  G   
Sbjct: 447 NKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRPY 506

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            A E+F KM  HG  P+L T+ TL+ G+ +      A  + + +K   + P      +L 
Sbjct: 507 AAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKILL 566

Query: 501 EARRATGLTKEAKRILSKIKNKE 523
                 G  ++AK + S +  +E
Sbjct: 567 GGMCKAGKLEDAKELFSSLSIEE 589



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 84/177 (47%), Gaps = 1/177 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM+      +  EA+ +F+ ++  G  P +++Y  L+      +R +    +  
Sbjct: 419 VVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFD 478

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ P+SI    +I+   ++G    A + F KM   G  P   TY+TL+ G+   G
Sbjct: 479 EMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHG 538

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             +E++ L + + ++  +KPN     +L+   C    + +A  +   ++   ++PDV
Sbjct: 539 HLDEALALFEAL-KKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/143 (26%), Positives = 73/143 (51%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +NK     V S   L+    +  +  EA+ +F+ +   G  P+ +T+TTL++ L    R 
Sbjct: 446 VNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGRP 505

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            +   +  ++  +G  PD I ++ +++ F + G+++EA+  F  +K+S L P       L
Sbjct: 506 YAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKKSQLKPNHVICKIL 565

Query: 184 IKGYGIAGKPEESVKLLDLMSRE 206
           + G   AGK E++ +L   +S E
Sbjct: 566 LGGMCKAGKLEDAKELFSSLSIE 588


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 228/455 (50%), Gaps = 40/455 (8%)

Query: 68  SCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           +CR    S T LM +L       +A  +  ++   G +  +VTY TL+  L      +  
Sbjct: 110 ACRPNAVSYTVLMRALCADRLADQAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKA 169

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
             +M ++ E+G++P+ + +++++  + +SG  E+    F +M E G+ P    Y  LI  
Sbjct: 170 VELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDS 229

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
               GK +++  ++D+M R G ++PN+ TYNVL+   C E ++ EA  V+ KM+  G+ P
Sbjct: 230 LCKVGKAKKAHGVMDMMVRRG-LEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAP 288

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEH--NGVQPNGRTCGIIISGYCKEGKIKEALR 304
           DVVTYNT+    +   E D+A  ++ EM    N V+PN  T   +I G C  G++++A +
Sbjct: 289 DVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQ 348

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFV---------EIMDR--------------------- 334
               M+E G   NLV +NLLI G +         E+MD                      
Sbjct: 349 VRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFC 408

Query: 335 -----DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
                D  +++L+ M++  + P++  Y  ++ A    G M++ + +F++M       D  
Sbjct: 409 KMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMDN-NFPLDVV 467

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           AYS +  G  +  + + A+ELL ++++ G  P+ V ++ +I+ +   G M+ A  V  +M
Sbjct: 468 AYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
              G  P++  F++L+ GYS   +  +  E+++ M
Sbjct: 528 TASGFLPDVAVFDSLIQGYSTKGEINKVLELIREM 562



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 230/457 (50%), Gaps = 7/457 (1%)

Query: 68  SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH---KPSLVTYTTLLAALTIQKRFN 124
           S R   S   ++ +L  RG    A A+   +    H   +P+ V+YT L+ AL   +  +
Sbjct: 73  SVRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLAD 132

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
               ++  +   G+  D + +  +I    ++  +++A++   +M ESG+ P    Y++L+
Sbjct: 133 QAVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLL 192

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           +GY  +G+ E+  K+   MS +G ++P++  Y  L+ + C      +A  VM  M   G+
Sbjct: 193 QGYCKSGRWEDVGKVFVEMSEKG-IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGL 251

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           +P+VVTYN +     + G   +A  V+ +M   GV P+  T   +I G     ++ EA+ 
Sbjct: 252 EPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMW 311

Query: 305 FARTM--KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
               M   +  V PN+V FN +I+G  +I       +V A+M+E     +++TY+ ++  
Sbjct: 312 LLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGG 371

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
                 + K  E+ D+M   G++PD+  YSIL KG+ +  + ++AE+LL TM + G  P 
Sbjct: 372 LLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPE 431

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           +  +  ++   C  G M+RA  +F++M ++    ++  + T++ G  +A     A+E+L+
Sbjct: 432 LFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLK 490

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            +   G+ P   T+ ++      +G  + A  +L ++
Sbjct: 491 SIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 207/432 (47%), Gaps = 34/432 (7%)

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGN--VKPNLRTYNVLVRAWCNEKNITEAWNVM 236
           +YNT++      G  + +  LL  MS E +   +PN  +Y VL+RA C ++   +A  ++
Sbjct: 79  SYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAVGLL 138

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
             M ++G++ DVVTY T+        E D+A E++ EM  +G++PN      ++ GYCK 
Sbjct: 139 RSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKS 198

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
           G+ ++  +    M E G+ P++V++  LI    ++        V+ +M    + P+V+TY
Sbjct: 199 GRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTY 258

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           + ++N     G + +   +   M + G+ PD   Y+ L KG     E ++A  LL  M+ 
Sbjct: 259 NVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVR 318

Query: 417 SG--FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
                 PNVV F ++I G C  G M +A +V   M E G   NL T+  L+ G     + 
Sbjct: 319 GKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKV 378

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI 534
            +A E++  M + G+ P   T+ +L +          A+ +LS ++++     +E E   
Sbjct: 379 RKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDR----GIEPE--- 431

Query: 535 PVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFAT 594
                  L+H             IP +V+  ++G    +++ R L  + D++      A 
Sbjct: 432 -------LFH------------YIPLLVAMCEQG---MMERARNLFNEMDNNFPLDVVAY 469

Query: 595 TSMYLSHSCKSG 606
           ++M +  +CK+G
Sbjct: 470 STM-IHGACKAG 480



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/386 (26%), Positives = 190/386 (49%), Gaps = 6/386 (1%)

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMK---ESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           D++ +N V+ A    G+ + A      M         P   +Y  L++        +++V
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M R   V+ ++ TY  L+R  C+   + +A  +M +M  SG++P+VV Y+++   
Sbjct: 136 GLLRSM-RSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQG 194

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y ++G  +   +V VEM   G++P+      +I   CK GK K+A      M   G+ PN
Sbjct: 195 YCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPN 254

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N+LI    +         VL  M E  V PDV+TY+T++   S    MD+   + +
Sbjct: 255 VVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLE 314

Query: 378 DM--GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           +M  GK  +KP+   ++ + +G        +A ++   M E+G   N+V +  +I G   
Sbjct: 315 EMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLR 374

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              + +A+E+ D+M   G+ P+  T+  L+ G+ +  Q  RAE++L  M+  G+ P+   
Sbjct: 375 VHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFH 434

Query: 496 FLLLAEARRATGLTKEAKRILSKIKN 521
           ++ L  A    G+ + A+ + +++ N
Sbjct: 435 YIPLLVAMCEQGMMERARNLFNEMDN 460



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/398 (23%), Positives = 177/398 (44%), Gaps = 70/398 (17%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L+    + G+ ++   +F  + E G +P +V YT L+ +L    +    H +M  +  
Sbjct: 189 SSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR 248

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++P+ + +N +IN   + G+++EA+    KM E G+ P   TYNTLIKG     + +E
Sbjct: 249 RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDE 308

Query: 196 SVKLLDLMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNV------------------- 235
           ++ LL+ M R  N VKPN+ T+N +++  C+   + +A+ V                   
Sbjct: 309 AMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLL 368

Query: 236 ----------------MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
                           M +M + G++PD  TY+ +   + +  + D+AE+++  M   G+
Sbjct: 369 IGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428

Query: 280 QP-----------------------------NGRTCGII-----ISGYCKEGKIKEALRF 305
           +P                             N     ++     I G CK G +K A   
Sbjct: 429 EPELFHYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKEL 488

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
            +++ + G+ P+ V ++++I  F +  D +  + VL  M      PDV  + +++  +ST
Sbjct: 489 LKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYST 548

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
            G ++K  E+  +M    I  D+   S L+   V   E
Sbjct: 549 KGEINKVLELIREMITKNIALDSKIISTLSTSLVASNE 586



 Score = 40.4 bits (93), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/112 (16%), Positives = 53/112 (47%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + +++   + G  + A+ +  ++++ G  P  VTY+ ++          + + ++ 
Sbjct: 466 VVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLK 525

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           Q+  +G  PD   F+++I  +S  G + + ++   +M    +   +   +TL
Sbjct: 526 QMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTL 577


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 224/425 (52%), Gaps = 5/425 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   +++ L + G   +A   ++ +++    P  VTY +++AAL+  +  +    +++
Sbjct: 11  VVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVLT 70

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +    + P+   +N++++ +  SG  E+A+  F KM   G+ P   TYN+L+      G
Sbjct: 71  VM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNG 126

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  E+ K+ D M + G +KP++ TY  L+  + ++  + E  +++  M  +GM+ D   +
Sbjct: 127 KCTEARKIFDSMVKRG-LKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVF 185

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  AY +  + D+   V  +M   G+ PN      +I G CK G++ +A+     M +
Sbjct: 186 NILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMID 245

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN+V++  LI         +  +E++  + +  +NP+++ ++TI+++    G + +
Sbjct: 246 KGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIE 305

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            K++FD +G  G+ PD   YS L  GY    + + A +LL  M+  G  P+ V ++T+I+
Sbjct: 306 SKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLIN 365

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C    M+ A+ +F +M  +GV+P++ T+  ++ G    R+   A+E+   +   G   
Sbjct: 366 GYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQL 425

Query: 492 QKSTF 496
           + ST+
Sbjct: 426 ELSTY 430



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 193/360 (53%), Gaps = 11/360 (3%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD + +N +I+   + G++++A  T+ +M +  ++P   TYN++I     A   + ++++
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           L +M     V PN  TYN ++  +C+     +A  +  KM + G++PDVVTYN++     
Sbjct: 69  LTVM-----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLC 123

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +NG+  +A ++   M   G++P+  T G ++ GY  +G + E       M + G+  +  
Sbjct: 124 KNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHH 183

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +FN+LI  + +   ++ VDEV+ +  + R   + P+ + Y T+++     G +D     F
Sbjct: 184 VFNILICAYTK---QEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNF 240

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           + M   G+ P+   Y+ L        + EKAEEL+  +++ G +PN+V F TI+   C +
Sbjct: 241 EQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKE 300

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +  + ++FD +   GV+P++ T+ TL+ GY  A +   A ++L  M + G+ P   T+
Sbjct: 301 GRVIESKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTY 360



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 174/372 (46%), Gaps = 4/372 (1%)

Query: 68  SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           +C T  S   +M+     G+ ++A  IF  +   G +P +VTY +L+  L    +     
Sbjct: 76  NCFTYNS---IMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKNGKCTEAR 132

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            I   + + G+ PD   +  +++ ++  G + E  D    M ++G+      +N LI  Y
Sbjct: 133 KIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVFNILICAY 192

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
               K +E V +   M ++G + PN   Y  ++   C    + +A     +M   G+ P+
Sbjct: 193 TKQEKVDEVVLVFSKMRQQG-LTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMIDKGLTPN 251

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           VV Y ++  A     + ++AEE+I E+   G+ PN      I+   CKEG++ E+ +   
Sbjct: 252 VVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIESKKLFD 311

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            +   GV+P+++ ++ LI G+      DG  ++L  M    + PD +TYST++N +    
Sbjct: 312 LLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLINGYCKIN 371

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            M+    +F +M   G+ PD   Y+I+  G  R +    A+EL   + ESG    +  + 
Sbjct: 372 RMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQLELSTYN 431

Query: 428 TIISGWCSDGSM 439
            I+  +    S+
Sbjct: 432 IILMDFAKTNSL 443



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/314 (25%), Positives = 163/314 (51%), Gaps = 4/314 (1%)

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           M+ +G   P++ +YN ++     E ++ +A+   H+M    + PD VTYN+I  A ++  
Sbjct: 1   MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
             D+A EV+  M    V PN  T   I+ GYC  G+ ++A+   R M   G+ P++V +N
Sbjct: 61  AMDRAMEVLTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            L+    +        ++   M +  + PD+ TY T+++ +++ G + +  ++   M + 
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G++ D H ++IL   Y ++++ ++   +   M + G  PN V + T+I G C  G +D A
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDA 236

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           +  F++M + G++PN+  + +L+       +  +AEE++  +   G++P    F  + ++
Sbjct: 237 MLNFEQMIDKGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDS 296

Query: 503 RRATGLTKEAKRIL 516
               G   E+K++ 
Sbjct: 297 LCKEGRVIESKKLF 310



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 4/210 (1%)

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++V +N +I G  +  D D        M + RV+PD +TY++I+ A S A  MD+  E+
Sbjct: 9   PDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEV 68

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
              M    + P+   Y+ +  GY    + EKA  +   M   G  P+VV + +++   C 
Sbjct: 69  LTVM----VMPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCK 124

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G    A ++FD M + G+ P++ T+ TL+ GY+         ++L +M   G+      
Sbjct: 125 NGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHV 184

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERT 525
           F +L  A        E   + SK++ +  T
Sbjct: 185 FNILICAYTKQEKVDEVVLVFSKMRQQGLT 214


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 239/507 (47%), Gaps = 15/507 (2%)

Query: 33  PAKKNNPGE---KKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIE----- 84
           PA+ + P     +++L S +   D          + +++    R + +L+++L       
Sbjct: 31  PARPSPPAHAAFRERLRSGTLGPDDARHLFDELLLRRDAPAPARGLNELLSALARAPPSA 90

Query: 85  --RGKPQEAQAIFNNLIEGG---HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
             R  P  A  +F  +         P++ TY  L+      +R +    +  ++   G+ 
Sbjct: 91  ACRDVPALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLG 150

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD   +NA+I+ FS+ G +++A D F+KM+E G+ P   TY++LI G     + +++ ++
Sbjct: 151 PDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERV 210

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           L  M   G V+PN  TYN L+  +       E+  V  +M++S + PDV   N+  TA  
Sbjct: 211 LRQMVGAG-VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALC 269

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           ++G   +A ++   M   G +P+  + G ++ GY   G I         M   GV P+  
Sbjct: 270 KHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRH 329

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           +FN LI  +  +   D    +   M +  VNPD+IT+ST+++A+   G +D   E F+ M
Sbjct: 330 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 389

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV-IFTTIISGWCSDGS 438
              G+ PD   YS L +G    ++  KA+EL+  M+  G  P  +  FT+II+  C +G 
Sbjct: 390 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 449

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +    +V D +   G  PNL TF +L+ GY        A  +L  M++ GV P   T+  
Sbjct: 450 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 509

Query: 499 LAEARRATGLTKEAKRILSKIKNKERT 525
           L +     G   +A  +   + +K  T
Sbjct: 510 LVDGYCKHGRIDDALTLFRDMLHKRVT 536



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/493 (24%), Positives = 222/493 (45%), Gaps = 37/493 (7%)

Query: 63  CMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           C   E+  T+ +   L+N      +P     +F  L+  G  P + +Y  L+   + +  
Sbjct: 109 CACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGE 168

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +  H +  ++EE G+ P+ + ++++IN   ++  M++A     +M  +G+ P   TYN 
Sbjct: 169 VDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNC 228

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY  +G  +ESV++   MS    V P++   N  + A C    I EA ++   M   
Sbjct: 229 LIHGYSTSGMWKESVRVFKEMSSSLLV-PDVGNCNSFMTALCKHGRIKEARDIFDSMVLK 287

Query: 243 GMKPDVVTY-----------------------------------NTIATAYAQNGEADQA 267
           G KPDV++Y                                   NT+  AYA+ G  D++
Sbjct: 288 GPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKS 347

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
             +  +M   GV P+  T   +IS +C+ G++ +A+     M + GV P+  +++ LI+G
Sbjct: 348 LLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQG 407

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYST-IMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
                D     E+++ M    + P  I + T I+N     G + + K++ D +   G +P
Sbjct: 408 QCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRP 467

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           +   ++ L  GY      ++A  LL +M   G  P++  + T++ G+C  G +D A+ +F
Sbjct: 468 NLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLF 527

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
             M    V+    ++  ++ G  +AR+   A+E+   M   G+     T+  +       
Sbjct: 528 RDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRN 587

Query: 507 GLTKEAKRILSKI 519
             T EA  +L K+
Sbjct: 588 NCTDEANMLLEKL 600



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/500 (21%), Positives = 223/500 (44%), Gaps = 47/500 (9%)

Query: 64  MNKESCRTVRSMTK------------LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYT 111
           M KES R  + M+              M +L + G+ +EA+ IF++++  G KP +++Y 
Sbjct: 238 MWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYG 297

Query: 112 TLL----------------------AALTIQKRFNSIHS-------------IMSQVEEN 136
            LL                        +  +  FN++ +             +   + + 
Sbjct: 298 ALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQ 357

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G++PD I F+ VI+AF   G +++AM+ F  M ++G+ P T+ Y+ LI+G        ++
Sbjct: 358 GVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKA 417

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            +L+  M  +G   P ++ +  ++   C E  + E  +V+  +  +G +P+++T+N++  
Sbjct: 418 KELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVD 477

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y   G   +A  ++  ME  GV+P+  T   ++ GYCK G+I +AL   R M    V  
Sbjct: 478 GYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTL 537

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
             V +N+++ G  +        E+   M E  +   + TY+T++         D+   + 
Sbjct: 538 TSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLL 597

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           + +    +K D   ++I+ +   +    ++A+EL   +   G  P ++ +  +I+    +
Sbjct: 598 EKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKE 657

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            S + A  +F  M +   +P+ +    ++       +  +A   L  +   G+ P+ +T 
Sbjct: 658 ESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTT 717

Query: 497 LLLAEARRATGLTKEAKRIL 516
            LL       G  +E  ++L
Sbjct: 718 SLLIYLFSVNGKYREYIKLL 737


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  205 bits (521), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 225/457 (49%), Gaps = 11/457 (2%)

Query: 74  SMTKLMNSLIERGKPQEA-QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           ++ +L+  L +  +  +A   +F  + E G+ P + +Y  L+  L ++K+      ++  
Sbjct: 128 TLNQLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIH 187

Query: 133 VEENG---MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           +  +G     P+ + +N VI+ F + G +++A   F +M   GL P   TYN+LI G   
Sbjct: 188 MTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCK 247

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           A   +++V +L  M  +G V P+ RTYN+++R +C+   + EA  ++ KM+ SG++PDVV
Sbjct: 248 AQAMDKAVAILQHMFDKG-VMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV 306

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY+ +   Y + G   +A  V   M   G +PN     I++ GY  +G + +       M
Sbjct: 307 TYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 366

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTA 366
              G+      FN+LI  + +      VD+ +    E R N   PDV++YST+++     
Sbjct: 367 IRDGIPFEHRAFNILICAYAK---HGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKT 423

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G ++     F+ M   G+ P+  +++ L  G     E +K EEL   MI  G HP+ +  
Sbjct: 424 GRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFM 483

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            TI+   C +G +  A + FD +   GV P++ ++ TL+ GY    +   + + L  M +
Sbjct: 484 NTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVS 543

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            G+ P   T+  L       G  ++A  +  ++  K+
Sbjct: 544 IGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKD 580



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 223/452 (49%), Gaps = 1/452 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   +++   + G+  +A  +F+ ++  G  P +VTY +L+  L   +  +   +I+ 
Sbjct: 200 VVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQ 259

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G+ PD+  +N +I  +   G +EEA+    KM  SGL P   TY+ LI+ Y   G
Sbjct: 260 HMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIG 319

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  + D M R+G  KPN   Y++L+  +  +  + +  +++  M   G+  +   +
Sbjct: 320 RCAEARSVFDSMVRKGQ-KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAF 378

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  AYA++G  D+A     EM  NG++P+  +   +I   CK G++++A+     M  
Sbjct: 379 NILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVS 438

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN++ F  LI G   I +   V+E+   M    ++PD I  +TIM+     G + +
Sbjct: 439 EGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVE 498

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            ++ FD +   G+KPD  +Y+ L  GY    + +++ + L  M+  G  P+   + ++++
Sbjct: 499 AQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLN 558

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+  +G ++ A+ ++ +M    V     T   ++ G  +A +   A E+   M   G   
Sbjct: 559 GYFKNGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQL 618

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           +  T+  +           EA R+   +++KE
Sbjct: 619 RIETYNTVLGGLCENSCVDEALRMFEDLRSKE 650



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/453 (23%), Positives = 205/453 (45%), Gaps = 47/453 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L + L+ + +P    A FN+++    +    +     AAL +        S+ + +  +G
Sbjct: 36  LFDELLPQARPASVHA-FNSVLTVVARADSSSSPRHSAALAV--------SLFNTMVRSG 86

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++  +     +I  F   G ++ A   F    ++G      T N LIKG     + ++++
Sbjct: 87  VNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQLIKGLCDGNRTDDAM 146

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKN----------------------------- 228
            ++     E    P++ +YN L++  C EK                              
Sbjct: 147 DMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTV 206

Query: 229 ---------ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
                    + +A+ + H+M   G+ PDVVTYN++     +    D+A  ++  M   GV
Sbjct: 207 IDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGV 266

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            P+ RT  I+I GYC  G+++EA+R  + M   G+ P++V ++LLI+ + +I        
Sbjct: 267 MPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARS 326

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           V   M      P+   Y  +++ ++T G +   +++ D M + GI  +  A++IL   Y 
Sbjct: 327 VFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYA 386

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +    +KA      M ++G  P+VV ++T+I   C  G ++ A+  F++M   G+SPN+ 
Sbjct: 387 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNII 446

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +F +L+ G     +  + EE+   M   G+HP 
Sbjct: 447 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHPD 479



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 169/348 (48%), Gaps = 1/348 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + +++ L + G+ ++A   FN ++  G  P+++++T+L+  L     +  +  +  
Sbjct: 410 VVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAF 469

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD+IF N +++   + G + EA D F  +   G+ P   +YNTLI GY   G
Sbjct: 470 EMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVG 529

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +ES+K LD M   G ++P+  TYN L+  +     + +A  +  +M    +K   +T 
Sbjct: 530 KMDESIKQLDRMVSIG-LRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKDVKFCAITS 588

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     Q G    A E+ ++M   G Q    T   ++ G C+   + EALR    ++ 
Sbjct: 589 NIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 648

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
                ++  F+++I   +++   D    + + M      PDVITYS ++ +    G +++
Sbjct: 649 KEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPVPDVITYSLMIKSHIEEGLLEE 708

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
              +F  M K G   D+H  +I+ +  + + +  +A   L  + E  F
Sbjct: 709 SDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTYLTKIDEKNF 756



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 114/512 (22%), Positives = 225/512 (43%), Gaps = 83/512 (16%)

Query: 43  KQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTK------------LMNSLIERGKPQE 90
           K +  +++  +   + +CS    +E+ R ++ M+             L+    + G+  E
Sbjct: 264 KGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAE 323

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+++F++++  G KP+   Y  LL     +     +  ++  +  +G+  +   FN +I 
Sbjct: 324 ARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILIC 383

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           A+++ G +++AM  F +M+++GL P   +Y+T+I      G+ E++V   + M  EG + 
Sbjct: 384 AYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEG-LS 442

Query: 211 PNLRTYNVLVRA------W-----------------------------CNEKNITEAWNV 235
           PN+ ++  L+        W                             C E  + EA + 
Sbjct: 443 PNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDF 502

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
              +   G+KPDVV+YNT+   Y   G+ D++ + +  M   G++P+  T   +++GY K
Sbjct: 503 FDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFK 562

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKG-------------FVEIMDR-------- 334
            G++++AL   R M    V    +  N+++ G             +++++DR        
Sbjct: 563 NGRVEDALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIET 622

Query: 335 -----------DGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
                        VDE L + ++ R      DV T+S ++NA    G +D+ K +F  M 
Sbjct: 623 YNTVLGGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMV 682

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             G  PD   YS++ K ++ E   E+++ L ++M ++G   +  +   I+      G + 
Sbjct: 683 LRGPVPDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVR 742

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
           RA     K+ E   S    T   L+   SE +
Sbjct: 743 RAGTYLTKIDEKNFSLEASTAALLIPIVSEKK 774


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 212/423 (50%), Gaps = 2/423 (0%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSI-HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
           G  P +++Y  +L A    KR  S   ++  ++ ++ + P+   +N +I  F  +GN++ 
Sbjct: 164 GFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDV 223

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A+  F +M++ G  P   TYNTLI GY    K ++  +LL  M+ +G ++PNL +YNV++
Sbjct: 224 ALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKG-LEPNLISYNVVI 282

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
              C E  + E   V+ +M   G   D VTYNT+   Y + G   QA  +  EM  +G+ 
Sbjct: 283 NGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLS 342

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+  T   +I   CK G +  A  F   M+  G+ PN   +  L+ GF +    +    V
Sbjct: 343 PSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRV 402

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L  M +   +P V+TY+ ++N    AG M     + +DM + G+ PD  +YS +  G+ R
Sbjct: 403 LKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCR 462

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
             + ++A  +   M+  G  P+ + ++++I G+C       A ++FD+M   G+ P+  T
Sbjct: 463 SYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFT 522

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  L+  Y       +A ++   M   GV P   T+ +L         T+EAKR+L K+ 
Sbjct: 523 YTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLF 582

Query: 521 NKE 523
            +E
Sbjct: 583 YEE 585



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 197/376 (52%), Gaps = 2/376 (0%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESG-NMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
           SI+   + +G  P  + +NAV++A   S  N+  A + F +M +S ++P   TYN LI+G
Sbjct: 155 SIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRG 214

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
           + +AG  + +++  D M ++G + PN+ TYN L+  +C  + I + + ++  MA  G++P
Sbjct: 215 FCLAGNLDVALRFFDRMEKKGCL-PNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEP 273

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           ++++YN +     + G   +   V+ EM   G   +  T   +I GYCKEG   +AL   
Sbjct: 274 NLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             M  +G+ P+++ +  LI    +  + +   E L  M+   + P+  TY+T+++ +S  
Sbjct: 334 AEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQK 393

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G+M++   +  +M   G  P    Y+ L  G+    +   A  +L  M E G  P+VV +
Sbjct: 394 GYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSY 453

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           +T++SG+C    +D A+ V  KM   G+ P+  T+ +L+ G+ E R+   A ++   M  
Sbjct: 454 STVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLR 513

Query: 487 FGVHPQKSTFLLLAEA 502
            G+ P + T+  L  A
Sbjct: 514 VGLPPDEFTYTALINA 529



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 189/380 (49%), Gaps = 1/380 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G    A   F+ + + G  P++VTY TL+      ++ +    ++  +   G++P+ I +
Sbjct: 219 GNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISY 278

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N VIN     G M+E      +M + G +    TYNTLIKGY   G   +++ +   M R
Sbjct: 279 NVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G + P++ TY  L+ + C   N+  A   + +M   G+ P+  TY T+   ++Q G  +
Sbjct: 339 HG-LSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  V+ EM  NG  P+  T   +I+G+C  GK+ +A+     MKE G+ P++V ++ ++
Sbjct: 398 EAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVL 457

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF    D D    V   M    + PD ITYS+++  +       +  ++FD+M + G+ 
Sbjct: 458 SGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLP 517

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   Y+ L   Y  E + +KA +L   M+E G  P+VV ++ +I+G         A  +
Sbjct: 518 PDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRL 577

Query: 446 FDKMCEHGVSPNLKTFETLM 465
             K+      P+  T+ TL+
Sbjct: 578 LLKLFYEESVPSDVTYHTLI 597



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 192/378 (50%), Gaps = 16/378 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+    + G   +A  +   ++  G  PS++TYT+L+ ++      N     + Q+   G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG 375

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +  +++ FS+ G M EA     +M ++G +P+  TYN LI G+ IAGK  +++
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAI 435

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L+ M  +G + P++ +Y+ ++  +C   ++ EA  V  KM A G+KPD +TY+++   
Sbjct: 436 AVLEDMKEKG-LTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQG 494

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + +     +A ++  EM   G+ P+  T   +I+ YC EG +++A++    M E GV P+
Sbjct: 495 FCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPD 554

Query: 318 LVIFNLLIKGF-VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN--------------A 362
           +V +++LI G   +   R+    +L L  E  V  DV  ++ I N               
Sbjct: 555 VVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKG 614

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +   G M +  ++F+ M +   KPD  AY+++  G+ R  +  KA  L   M++SGF  +
Sbjct: 615 FCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLH 674

Query: 423 VVIFTTIISGWCSDGSMD 440
            V    ++     +G ++
Sbjct: 675 TVTVIALVKTLHKEGKVN 692



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/489 (23%), Positives = 216/489 (44%), Gaps = 56/489 (11%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++N L   G+ +E   +   + + G+    VTY TL+     +  F+    + +++
Sbjct: 277 SYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G+ P  I + ++I++  ++GNM  A +   +M+  GL P   TY TL+ G+   G  
Sbjct: 337 LRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+ ++L  M   G   P++ TYN L+   C    + +A  V+  M   G+ PDVV+Y+T
Sbjct: 397 NEAYRVLKEMIDNG-FSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYST 455

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           + + + ++ + D+A  V  +M   G++P+  T   +I G+C++ + KEA           
Sbjct: 456 VLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEAC---------- 505

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
                                D  DE+L +     + PD  TY+ ++NA+   G + K  
Sbjct: 506 ---------------------DLFDEMLRV----GLPPDEFTYTALINAYCMEGDLQKAI 540

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT----- 428
           ++ ++M + G+ PD   YS+L  G  ++    +A+ LL+ +      P+ V + T     
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENC 600

Query: 429 ----------IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
                     +I G+C  G M  A +VF+ M E    P+   +  ++ G+       +A 
Sbjct: 601 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAY 660

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVES 538
            + + M   G      T + L +     G   E   +   I N  R+ E+   E   V  
Sbjct: 661 SLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSV---IANVLRSCELSEAEQAKV-- 715

Query: 539 LERLYHKEA 547
           L  + H+E 
Sbjct: 716 LVEINHREG 724



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 187/392 (47%), Gaps = 39/392 (9%)

Query: 159 EEAMDTFWKMKESG--LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
           E+A   F  ++E+      T+S ++ ++K Y      ++++ ++ L    G   P + +Y
Sbjct: 114 EDASLVFRSLQETYDLCNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHG-FMPGVLSY 172

Query: 217 NVLVRAWCNEK-NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           N ++ A    K NI+ A NV  +M  S + P+V TYN +   +   G  D A      ME
Sbjct: 173 NAVLDATIRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRME 232

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV------ 329
             G  PN  T   +I GYCK  KI +     R+M   G+ PNL+ +N++I G        
Sbjct: 233 KKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMK 292

Query: 330 EI------MDRDG--VDEVL---------------------ALMKEFRVNPDVITYSTIM 360
           EI      M++ G  +DEV                      A M    ++P VITY++++
Sbjct: 293 EISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLI 352

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           ++   AG M++  E  D M   G+ P+   Y+ L  G+ ++    +A  +L  MI++GF 
Sbjct: 353 HSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFS 412

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+VV +  +I+G C  G M  AI V + M E G++P++ ++ T++ G+  +     A  +
Sbjct: 413 PSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRV 472

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            + M A G+ P   T+  L +       TKEA
Sbjct: 473 KRKMVAKGIKPDTITYSSLIQGFCEQRRTKEA 504



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 94/312 (30%), Positives = 157/312 (50%), Gaps = 1/312 (0%)

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE-ADQAEEVIVE 273
            ++++V+++     I +A +++H   A G  P V++YN +  A  ++      AE V  E
Sbjct: 136 VFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKE 195

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M  + V PN  T  I+I G+C  G +  ALRF   M++ G  PN+V +N LI G+ ++  
Sbjct: 196 MLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRK 255

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            D   E+L  M    + P++I+Y+ ++N     G M +   +  +M K G   D   Y+ 
Sbjct: 256 IDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNT 315

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L KGY +E    +A  +   M+  G  P+V+ +T++I   C  G+M+RA E  D+M   G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRG 375

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           + PN +T+ TL+ G+S+      A  +L+ M   G  P   T+  L       G   +A 
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAI 435

Query: 514 RILSKIKNKERT 525
            +L  +K K  T
Sbjct: 436 AVLEDMKEKGLT 447



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/392 (23%), Positives = 179/392 (45%), Gaps = 21/392 (5%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C   R+ T L++   ++G   EA  +   +I+ G  PS+VTY  L+    I  +     +
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIA 436

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++  ++E G+ PD + ++ V++ F  S +++EA+    KM   G+ P T TY++LI+G+ 
Sbjct: 437 VLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFC 496

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
              + +E+  L D M R G + P+  TY  L+ A+C E ++ +A  + ++M   G+ PDV
Sbjct: 497 EQRRTKEACDLFDEMLRVG-LPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDV 555

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTY+ +     +     +A+ +++++ +    P+  T   +I   C   + K  +     
Sbjct: 556 VTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVS---- 610

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
                          LIKGF         D+V   M E    PD   Y+ +++     G 
Sbjct: 611 ---------------LIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGD 655

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           + K   ++ +M K+G          L K   +E +  +   ++  ++ S           
Sbjct: 656 IRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVLRSCELSEAEQAKV 715

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
           ++     +G+MD  ++V  +M + G  PN K+
Sbjct: 716 LVEINHREGNMDVVLDVLAEMAKDGFLPNGKS 747


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 139/549 (25%), Positives = 259/549 (47%), Gaps = 31/549 (5%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +RS   L+N+LIE  K  EA++ F      G  P+L TY  L+     +K+F+    +++
Sbjct: 114 IRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLN 173

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + E G  PD   +  +IN+ +++G M +A+  F +M E G+TP  + YN LI G+   G
Sbjct: 174 WMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 233

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               + ++ + + +  +V PN+ +YNV++   C      E++ + H+M  +    D+ TY
Sbjct: 234 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 293

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +T+      +G  D A  V  EM  NGV P+      +++GY + G+I+E L   + M++
Sbjct: 294 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G    +V +N+LI+G  E    D    +  L+ E     D +TY  +++     G+++K
Sbjct: 354 EGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNK 412

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              I ++        D  AYS +  G  RE   ++   +L  M + G  PN  +   +I+
Sbjct: 413 ALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVIN 472

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+     ++ A+  F  M   G  P + T+ TL+ G S+A +   A  +++ M   G  P
Sbjct: 473 GFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKP 532

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTAS 551
              T+ LL       GL  + K++   +    +  E   + D+ + ++  + H   ++  
Sbjct: 533 NMITYSLL-----MNGLC-QGKKLDMALNLWCQALEKGFKPDVKMHNI--IIHGLCSSGK 584

Query: 552 YPNLLQ----------IPNVVSSDQKGSAAALKKGRMLLRDADSSLEC------SWFATT 595
             + LQ          +PN+V+ +       L +G   +RD + + +       SW ++ 
Sbjct: 585 VEDALQLYSEMKQRKCVPNLVTHN------TLMEGFYKVRDFERASKIWDHILQSWSSSN 638

Query: 596 SMYLSHSCK 604
             Y+ H+C+
Sbjct: 639 CYYMEHTCQ 647



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 1/270 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M KE CRTV S   L+  L E  K  EA +I+  L E       +TY  L+  L      
Sbjct: 351 MEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 410

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           N   SI+ + E    D D+  ++++IN     G ++E      +M + G  P     N +
Sbjct: 411 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAV 470

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G+  A K E++++    M  +G   P + TYN L+      +  +EA+ ++ +M   G
Sbjct: 471 INGFVRASKLEDALRFFGNMVSKGCF-PTVVTYNTLINGLSKAERFSEAYALVKEMLHKG 529

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
            KP+++TY+ +     Q  + D A  +  +    G +P+ +   III G C  GK+++AL
Sbjct: 530 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 589

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           +    MK+    PNLV  N L++GF ++ D
Sbjct: 590 QLYSEMKQRKCVPNLVTHNTLMEGFYKVRD 619



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 158/341 (46%), Gaps = 2/341 (0%)

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           T+IK Y     P++++ +   M      +P +R+YN L+ A        EA +       
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G+ P++ TYN +     +  + D+A+E++  M   G  P+  + G +I+   K G + +
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA-LMKEFRVNPDVITYSTIM 360
           AL+    M E GV P++  +N+LI GF +  D     E+   L+K   V P++ +Y+ ++
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 262

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           N     G  D+  EI+  M K     D + YS L  G       + A  +   M E+G  
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+VV++ T+++G+   G ++  +E++  M + G    + ++  L+ G  E  +   A  I
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISI 381

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            +++          T+ +L       G   +A  IL + +N
Sbjct: 382 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 107/207 (51%), Gaps = 2/207 (0%)

Query: 324 LIKGFVEIMDRDGVDEVLALMKE-FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +IK + +    D   ++   M E F   P + +Y++++NA   +   D+ +  F      
Sbjct: 84  VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ P+   Y+IL K   R+++ +KA+ELL  M E GF P+V  + T+I+    +G M  A
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ-IMKAFGVHPQKSTFLLLAE 501
           +++FD+M E GV+P++  +  L+ G+ +      A EI + ++K   V+P   ++ ++  
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263

Query: 502 ARRATGLTKEAKRILSKIKNKERTNEM 528
                G   E+  I  ++K  ER  ++
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDL 290



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 38/131 (29%), Positives = 68/131 (51%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+N L +  +  EA A+   ++  G KP+++TY+ L+  L   K+ +   ++ 
Sbjct: 498 TVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLW 557

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            Q  E G  PD    N +I+    SG +E+A+  + +MK+    P   T+NTL++G+   
Sbjct: 558 CQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKV 617

Query: 191 GKPEESVKLLD 201
              E + K+ D
Sbjct: 618 RDFERASKIWD 628


>gi|297746072|emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 224/430 (52%), Gaps = 2/430 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L+  LI+    ++A  +FN   +G  K  + ++  ++         +    ++ Q+
Sbjct: 132 TFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQM 190

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           EE G+ P+ + +  +I+   ++G++E     F+KM E  +     TY  LI G+   G  
Sbjct: 191 EEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLK 250

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++ ++L + M   G V PN+ TYN ++   CN+  +  A+ +  +M   G+  +VVTYNT
Sbjct: 251 KDGIELYEKMKLTGIV-PNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNT 309

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     Q     +AE ++  M+ +G+ PN  +   +I GYC  G + +A      MK  G
Sbjct: 310 LIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSG 369

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P+L  +N+LI GF E  +  GV +++  M+   ++P  +TY+ +M+A   +  ++K  
Sbjct: 370 QSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAF 429

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           +I+  M KAG+  D + Y +L  G     + ++A +L  ++ E    PN VI+ T+I G+
Sbjct: 430 QIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGY 489

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C +GS  RA+ +  +M E+G+ PN+ ++ + +    +  +   AE +L+ M   G+ P  
Sbjct: 490 CKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEAEVLLKDMIELGLKPSI 549

Query: 494 STFLLLAEAR 503
           S + ++++AR
Sbjct: 550 SIWNMISKAR 559



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 174/329 (52%), Gaps = 4/329 (1%)

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
           PE+++   + M   G V P   T+N L+          +AW V ++   + +K DV ++ 
Sbjct: 111 PEQALFYFNQMIGRGLV-PGSNTFNNLLILLIKSNFFEKAWRVFNETKGN-VKLDVYSFG 168

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +     + G  D+  EV+ +ME  G+ PN      +I G CK G I+   +    M E 
Sbjct: 169 IMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL 228

Query: 313 GVHPNLVIFNLLIKGFVEI-MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            V  N   + +LI GF ++ + +DG+ E+   MK   + P+V TY++++      G ++ 
Sbjct: 229 DVVANQYTYTVLINGFFKMGLKKDGI-ELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNN 287

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+FD+M + G+  +   Y+ L  G  +E+   +AE L+  M   G  PN++ + T+I 
Sbjct: 288 AFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLID 347

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+CS G++D+A  +F++M   G SP+L T+  L+ G+SEA+      ++++ M+A G+ P
Sbjct: 348 GYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSP 407

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIK 520
            K T+ +L +A   +   ++A +I S ++
Sbjct: 408 SKVTYTILMDALVRSDNIEKAFQIYSSME 436



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/498 (22%), Positives = 221/498 (44%), Gaps = 87/498 (17%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
            T +S++ +++ LI       +Q++   LI G    S  T ++L   LT Q   +S    
Sbjct: 36  HTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSSLFHELT-QPHLDSF--- 91

Query: 130 MSQVEENGMDPDSIFFN-AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
                     P  +  + A+INA   S   E+A+  F +M   GL P ++T+N L+    
Sbjct: 92  ----------PTHVLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLI 141

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            +   E++ ++ +    +GNVK ++ ++ ++++  C    + + + V+ +M   G+ P+V
Sbjct: 142 KSNFFEKAWRVFN--ETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNV 199

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY--------------- 293
           V Y T+     +NG+ ++ +++  +M    V  N  T  ++I+G+               
Sbjct: 200 VVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEK 259

Query: 294 --------------------CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
                               C +GK+  A      M+E GV  N+V +N LI G  +   
Sbjct: 260 MKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERR 319

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
               + ++  MK   ++P++I+Y+T+++ + + G +DK   +F+ M  +G  P    Y+I
Sbjct: 320 VLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNI 379

Query: 394 LAKGY------------VREQEP-----------------------EKAEELLMTMIESG 418
           L  G+            VRE E                        EKA ++  +M ++G
Sbjct: 380 LIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAG 439

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
              ++ I+  +I G C  G M  A ++F  + E  + PN   + T+++GY +    +RA 
Sbjct: 440 LVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRAL 499

Query: 479 EILQIMKAFGVHPQKSTF 496
            +L+ M   G+ P  +++
Sbjct: 500 RLLKEMGENGMVPNVASY 517



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 140/274 (51%), Gaps = 1/274 (0%)

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           V+ +  I  A+ ++   +QA     +M   G+ P   T   ++    K    ++A R   
Sbjct: 95  VLIHEAIINAHVRSQLPEQALFYFNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 154

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
             K   V  ++  F ++IKG  E+   D   EVL  M+E  ++P+V+ Y+T+++     G
Sbjct: 155 ETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 213

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +++ K++F  MG+  +  + + Y++L  G+ +    +   EL   M  +G  PNV  + 
Sbjct: 214 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 273

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           ++I   C+DG ++ A E+FD+M E GV+ N+ T+ TL+ G  + R+   AE ++  MK  
Sbjct: 274 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 333

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           G+ P   ++  L +   + G   +A  + +++K+
Sbjct: 334 GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKS 367



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 1/160 (0%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G  PS VTYT L+ AL           I S +E+ G+  D   +  +I+     G+M+EA
Sbjct: 404 GLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEA 463

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
              F  + E  L P    YNT+I GY   G    +++LL  M   G V PN+ +YN  ++
Sbjct: 464 SKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMV-PNVASYNSTIQ 522

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
             C ++  TEA  ++  M   G+KP +  +N I+ A   N
Sbjct: 523 ILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFDN 562


>gi|147784915|emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 224/430 (52%), Gaps = 2/430 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L+  LI+    ++A  +FN   +G  K  + ++  ++         +    ++ Q+
Sbjct: 119 TFNNLLILLIKSNFFEKAWRVFNE-TKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQM 177

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           EE G+ P+ + +  +I+   ++G++E     F+KM E  +     TY  LI G+   G  
Sbjct: 178 EEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLK 237

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++ ++L + M   G + PN+ TYN ++   CN+  +  A+ +  +M   G+  +VVTYNT
Sbjct: 238 KDGIELYEKMKLTG-IVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNT 296

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     Q     +AE ++  M+ +G+ PN  +   +I GYC  G + +A      MK  G
Sbjct: 297 LIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSG 356

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P+L  +N+LI GF E  +  GV +++  M+   ++P  +TY+ +M+A   +  ++K  
Sbjct: 357 QSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAF 416

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           +I+  M KAG+  D + Y +L  G     + ++A +L  ++ E    PN VI+ T+I G+
Sbjct: 417 QIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGY 476

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C +GS  RA+ +  +M E+G+ PN+ ++ + +    +  +   AE +L+ M   G+ P  
Sbjct: 477 CKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEAEVLLKDMIELGLKPSI 536

Query: 494 STFLLLAEAR 503
           S + ++++AR
Sbjct: 537 SIWNMISKAR 546



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 174/329 (52%), Gaps = 4/329 (1%)

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
           PE+++   + M   G V P   T+N L+          +AW V ++   + +K DV ++ 
Sbjct: 98  PEQALFYXNQMIGRGLV-PGSNTFNNLLILLIKSNFFEKAWRVFNETKGN-VKLDVYSFG 155

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +     + G  D+  EV+ +ME  G+ PN      +I G CK G I+   +    M E 
Sbjct: 156 IMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGEL 215

Query: 313 GVHPNLVIFNLLIKGFVEI-MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            V  N   + +LI GF ++ + +DG+ E+   MK   + P+V TY++++      G ++ 
Sbjct: 216 DVVANQYTYTVLINGFFKMGLKKDGI-ELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNN 274

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+FD+M + G+  +   Y+ L  G  +E+   +AE L+  M   G  PN++ + T+I 
Sbjct: 275 AFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLID 334

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+CS G++D+A  +F++M   G SP+L T+  L+ G+SEA+      ++++ M+A G+ P
Sbjct: 335 GYCSIGNLDKASSLFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSP 394

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIK 520
            K T+ +L +A   +   ++A +I S ++
Sbjct: 395 SKVTYTILMDALVRSDNIEKAFQIYSSME 423



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/498 (22%), Positives = 220/498 (44%), Gaps = 87/498 (17%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
            T +S++ +++ LI       +Q++   LI G    S  T ++L   LT Q   +S    
Sbjct: 23  HTHQSISFILHLLISSNLFSHSQSLLLKLISGQISSSSFTPSSLFHELT-QPHLDSF--- 78

Query: 130 MSQVEENGMDPDSIFFN-AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
                     P  +  + A+INA   S   E+A+    +M   GL P ++T+N L+    
Sbjct: 79  ----------PTHVLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLI 128

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            +   E++ ++ +    +GNVK ++ ++ ++++  C    + + + V+ +M   G+ P+V
Sbjct: 129 KSNFFEKAWRVFN--ETKGNVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNV 186

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY--------------- 293
           V Y T+     +NG+ ++ +++  +M    V  N  T  ++I+G+               
Sbjct: 187 VVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEK 246

Query: 294 --------------------CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
                               C +GK+  A      M+E GV  N+V +N LI G  +   
Sbjct: 247 MKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERR 306

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
               + ++  MK   ++P++I+Y+T+++ + + G +DK   +F+ M  +G  P    Y+I
Sbjct: 307 VLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSSGQSPSLATYNI 366

Query: 394 LAKGY------------VREQEP-----------------------EKAEELLMTMIESG 418
           L  G+            VRE E                        EKA ++  +M ++G
Sbjct: 367 LIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAG 426

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
              ++ I+  +I G C  G M  A ++F  + E  + PN   + T+++GY +    +RA 
Sbjct: 427 LVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRAL 486

Query: 479 EILQIMKAFGVHPQKSTF 496
            +L+ M   G+ P  +++
Sbjct: 487 RLLKEMGENGMVPNVASY 504



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 140/274 (51%), Gaps = 1/274 (0%)

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           V+ +  I  A+ ++   +QA     +M   G+ P   T   ++    K    ++A R   
Sbjct: 82  VLIHEAIINAHVRSQLPEQALFYXNQMIGRGLVPGSNTFNNLLILLIKSNFFEKAWRVFN 141

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
             K   V  ++  F ++IKG  E+   D   EVL  M+E  ++P+V+ Y+T+++     G
Sbjct: 142 ETKG-NVKLDVYSFGIMIKGCCEVGYLDKGFEVLGQMEEMGLSPNVVVYTTLIDGCCKNG 200

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +++ K++F  MG+  +  + + Y++L  G+ +    +   EL   M  +G  PNV  + 
Sbjct: 201 DIERGKQLFYKMGELDVVANQYTYTVLINGFFKMGLKKDGIELYEKMKLTGIVPNVYTYN 260

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           ++I   C+DG ++ A E+FD+M E GV+ N+ T+ TL+ G  + R+   AE ++  MK  
Sbjct: 261 SMICRCCNDGKLNNAFELFDEMRERGVACNVVTYNTLIGGLCQERRVLEAERLMCRMKRD 320

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           G+ P   ++  L +   + G   +A  + +++K+
Sbjct: 321 GLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKS 354



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 1/160 (0%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G  PS VTYT L+ AL           I S +E+ G+  D   +  +I+     G+M+EA
Sbjct: 391 GLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEA 450

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
              F  + E  L P    YNT+I GY   G    +++LL  M   G V PN+ +YN  + 
Sbjct: 451 SKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMV-PNVASYNSTIX 509

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
             C ++  TEA  ++  M   G+KP +  +N I+ A   N
Sbjct: 510 ILCKDEKWTEAEVLLKDMIELGLKPSISIWNMISKARFDN 549


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 218/435 (50%), Gaps = 6/435 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++   ++G  Q A    N L   G  P++ TY  L+        F ++  +++++   G
Sbjct: 246 IIDGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARG 305

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++ +   FN VI+A  + G + EA +   +M E G  P  +TYN +I      G+ EE+ 
Sbjct: 306 LNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEAD 365

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL+  ++E  + PN  +Y  L+ A+C + +  +A  ++ ++A  G K D+V+Y      
Sbjct: 366 ELLE-KAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHG 424

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               GE D A  V  +M   GV P+ +   I++SG CK+G+I         M +  V P+
Sbjct: 425 VVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPD 484

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           + +F  LI GF+   + D   ++  ++    V+P ++ Y+ ++  +   G M       +
Sbjct: 485 VYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLN 544

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M      PD + YS +  GYV++ +   A ++   M++  F PNV+ +T++I+G+C   
Sbjct: 545 EMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKA 604

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M RA +VF  M    + PN+ T+ TL+ G+ +A +P RA  I ++M   G  P  +TF 
Sbjct: 605 DMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFH 664

Query: 498 LLAEARRATGLTKEA 512
            L       GLT  A
Sbjct: 665 YL-----INGLTNTA 674



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 195/420 (46%), Gaps = 6/420 (1%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           V +++LL  L   + F  I  ++  ++   + P    F+A+I A++ESG+++ A+  F  
Sbjct: 96  VAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRALQLFHT 155

Query: 168 MKE-SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE----GNVKPNLRTYNVLVRA 222
           ++E     PT    N L+ G   +GK + +++L D M +     G V  N  T +++V+ 
Sbjct: 156 VREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTT-SIMVKG 214

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            CN   I E   ++         P VV YN I   Y + G+   A   + E++  GV P 
Sbjct: 215 LCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKGVLPT 274

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T G +I+G+CK G+ +   +    M   G++ N+ +FN +I    +        E+L 
Sbjct: 275 VETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLR 334

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M E    PD+ TY+ ++N     G +++  E+ +   + G+ P+  +Y+ L   Y ++ 
Sbjct: 335 RMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKG 394

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           +  KA  +L  + E G   ++V +   I G    G +D A+ V +KM E GV P+ + + 
Sbjct: 395 DYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYN 454

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            LM G  +  +    + +L  M    V P    F  L +     G   EA +I   I  K
Sbjct: 455 ILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRK 514



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 88/385 (22%), Positives = 183/385 (47%), Gaps = 5/385 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           + + + R +    K+ N++I+     G   EA  +   + E G  P + TY  ++     
Sbjct: 298 LTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCK 357

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
             R      ++ + +E G+ P+   +  +++A+ + G+  +A    +++ E G      +
Sbjct: 358 GGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVS 417

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           Y   I G  +AG+ + ++ + + M  +G V P+ + YN+L+   C +  I     ++ +M
Sbjct: 418 YGAFIHGVVVAGEIDVALMVREKMMEKG-VFPDAQIYNILMSGLCKKGRIPAMKLLLSEM 476

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
               ++PDV  + T+   + +NGE D+A ++   +   GV P       +I G+CK GK+
Sbjct: 477 LDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKM 536

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            +AL     M      P+   ++ +I G+V+  D     ++   M + +  P+VITY+++
Sbjct: 537 TDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSL 596

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +N +     M + +++F  M    + P+   Y+ L  G+ +  +PE+A  +   M+ +G 
Sbjct: 597 INGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGC 656

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIE 444
            PN   F  +I+G  +  +    IE
Sbjct: 657 LPNDATFHYLINGLTNTATSPVLIE 681



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/410 (22%), Positives = 174/410 (42%), Gaps = 52/410 (12%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N   + G+ +EA  +     E G  P+  +YT L+ A   +  +     ++ ++ E G
Sbjct: 351 MINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIG 410

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK-PEES 196
              D + + A I+    +G ++ A+    KM E G+ P    YN L+ G    G+ P   
Sbjct: 411 EKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMK 470

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + L +++ R  NV+P++  +  L+  +     + EA  +   +   G+ P +V YN +  
Sbjct: 471 LLLSEMLDR--NVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIK 528

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            + + G+   A   + EM      P+  T   +I GY K+  +  AL+    M ++   P
Sbjct: 529 GFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKP 588

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N++ +  LI GF +  D    ++V + MK F + P+V+TY+T++  +  AG  ++   IF
Sbjct: 589 NVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIF 648

Query: 377 DDMGKAGIKPDAHAYSILAKGY---------VREQEPEK--------------------- 406
           + M   G  P+   +  L  G          + E++ ++                     
Sbjct: 649 ELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQV 708

Query: 407 -------------------AEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
                              A+ LL  M+  GF  + V FT ++ G C  G
Sbjct: 709 IAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKG 758



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/230 (26%), Positives = 101/230 (43%), Gaps = 15/230 (6%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  +A +  N +    H P   TY+T++     Q   +S   +  Q+ ++   P+ I +
Sbjct: 534 GKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITY 593

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
            ++IN F +  +M  A   F  MK   L P   TY TL+ G+  AGKPE +  + +LM  
Sbjct: 594 TSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLM 653

Query: 206 EGNVKPNLRTYNVLVRAWCN---------EKNITE-----AWNVMHKMAASGMKPDVVTY 251
            G + PN  T++ L+    N         EK+  E       +    M   G    +  Y
Sbjct: 654 NGCL-PNDATFHYLINGLTNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAY 712

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
           N++     ++G  D A+ ++ +M   G   +      ++ G C +GK KE
Sbjct: 713 NSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFTALLHGLCHKGKSKE 762



 Score = 41.6 bits (96), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 23/108 (21%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
           + F  + D + +S+++   ++     + + + ++M    +KP   A+S L   Y      
Sbjct: 87  RPFSCSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSL 146

Query: 405 EKAEELLMTMIE-SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           ++A +L  T+ E     P  V    +++G    G +D A++++DKM +
Sbjct: 147 DRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQ 194


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 217/435 (49%), Gaps = 1/435 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++    G  + A A+ ++++  G KP +VTY ++L  L     ++    +  ++++ G
Sbjct: 197 MVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFG 256

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   F  +I  F   G +EEA+  + +M+  G+ P   +++ LI  +   GK + ++
Sbjct: 257 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 316

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             L  M   G V P+   Y +++  +C    +++A  V  +M   G  PDVVTYNT+   
Sbjct: 317 AYLREMRCFGLV-PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 375

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +      AE ++ EM   GV P+  T   +I GYC EGK+ +AL+   TM    + P+
Sbjct: 376 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 435

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N LI G     D D  +++   M    + P+ +TYS ++++    G ++      D
Sbjct: 436 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 495

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   GI P+   Y+ + KGY R     K ++ L  M+ +   P+++ + T+I G+  + 
Sbjct: 496 EMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKED 555

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M  A ++ + M +  V P++ T+  L+ G+S       A  I + M A G+ P + T++
Sbjct: 556 KMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYM 615

Query: 498 LLAEARRATGLTKEA 512
            +       G +KEA
Sbjct: 616 SMINGHVTAGNSKEA 630



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 220/435 (50%), Gaps = 36/435 (8%)

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F+ + +++S++E+  + PD +  N +++A   +G+ E AM     M   GL P   TYN+
Sbjct: 172 FDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNS 231

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           ++KG   +G  +++ ++   M   G V P++R++ +L+  +C    I EA  +  +M   
Sbjct: 232 VLKGLCRSGMWDKAWEVFKEMDDFG-VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHR 290

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+KPD+V+++ +   +A+ G+ D A   + EM   G+ P+G    ++I G+C+ G + +A
Sbjct: 291 GIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDA 350

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVE---IMDRDG----------------------- 336
           LR    M   G  P++V +N L+ G  +   ++D +G                       
Sbjct: 351 LRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHG 410

Query: 337 ------VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
                 +D+ L L   M   R+ PD++TY+T+++     G +DK  +++DDM    I P+
Sbjct: 411 YCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPN 470

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              YSIL   +  + + E A   L  MI  G  PN++ + +II G+C  G++ +  +   
Sbjct: 471 HVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQ 530

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           KM  + VSP+L T+ TL+ GY +  +   A ++L +M+   V P   T+ +L       G
Sbjct: 531 KMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHG 590

Query: 508 LTKEAKRILSKIKNK 522
             +EA  I  K+  K
Sbjct: 591 NVQEAGWIFEKMCAK 605



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 199/388 (51%), Gaps = 1/388 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           VRS T L+      G+ +EA  I+  +   G KP LV+++ L+     + + +   + + 
Sbjct: 261 VRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLR 320

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD + +  VI  F  +G M +A+    +M   G  P   TYNTL+ G     
Sbjct: 321 EMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKER 380

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  ++  LL+ M RE  V P+L T+  L+  +C E  + +A  +   M    ++PD+VTY
Sbjct: 381 RLLDAEGLLNEM-RERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 439

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+     + G+ D+A ++  +M    + PN  T  I+I  +C++G++++A  F   M  
Sbjct: 440 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 499

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN++ +N +IKG+    +     + L  M   +V+PD+ITY+T+++ +     M  
Sbjct: 500 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHD 559

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++ + M K  ++PD   Y++L  G+      ++A  +   M   G  P+   + ++I+
Sbjct: 560 AFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMIN 619

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           G  + G+   A ++ D+M + G +P+ K
Sbjct: 620 GHVTAGNSKEAFQLHDEMLQRGFAPDDK 647



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 191/365 (52%), Gaps = 7/365 (1%)

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A D +  +  S     T T N ++  Y  A + ++   ++  M +   V P++ T+NV+V
Sbjct: 140 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRC-VFPDVVTHNVMV 198

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
            A     +   A  ++  M + G+KP +VTYN++     ++G  D+A EV  EM+  GV 
Sbjct: 199 DARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVA 258

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+ R+  I+I G+C+ G+I+EAL+  + M+  G+ P+LV F+ LI  F     R  +D  
Sbjct: 259 PDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFAR---RGKMDHA 315

Query: 341 LALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           +A ++E R   + PD + Y+ ++  +  AG M     + D+M   G  PD   Y+ L  G
Sbjct: 316 MAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNG 375

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             +E+    AE LL  M E G  P++  FTT+I G+C +G +D+A+++FD M    + P+
Sbjct: 376 LCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPD 435

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + T+ TL+ G        +A ++   M +  + P   T+ +L ++    G  ++A   L 
Sbjct: 436 IVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLD 495

Query: 518 KIKNK 522
           ++ NK
Sbjct: 496 EMINK 500



 Score = 72.4 bits (176), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 38/144 (26%), Positives = 70/144 (48%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +NK     + +   ++      G   + Q     ++     P L+TY TL+     + + 
Sbjct: 498 INKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKM 557

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +++ +E+  + PD + +N +IN FS  GN++EA   F KM   G+ P   TY ++
Sbjct: 558 HDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSM 617

Query: 184 IKGYGIAGKPEESVKLLDLMSREG 207
           I G+  AG  +E+ +L D M + G
Sbjct: 618 INGHVTAGNSKEAFQLHDEMLQRG 641


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 226/451 (50%), Gaps = 3/451 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++N     G+  +A  +F ++ + G  P++VTYT ++  L   +  +    +  Q+
Sbjct: 206 SYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQM 265

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            + G+ P+ + +  +I+ +   G  +E +    +M   GL P   TY  L+      GK 
Sbjct: 266 IDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKC 325

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+ KL D M R+G +KP++  Y +++  +  +  ++E  + +  M  +G+ P+   +N 
Sbjct: 326 TEARKLFDSMIRKG-IKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNI 384

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRFARTMKEY 312
           +  A+A+     +A ++  +M   G+ PN      +I   CK G++ +A L+F + + E 
Sbjct: 385 VFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINE- 443

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           GV PN+V+F  L+ G   I   +   E+   M    ++P+V+ ++TIM    T G + K 
Sbjct: 444 GVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKA 503

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           + + D M + G +PD  +Y+ L +G+    + ++A +LL  M+  G  PN   + T++ G
Sbjct: 504 QRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHG 563

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C DG +D A  VF +M  +G++P + T+ T++ G  + R+   A+E+   M   G    
Sbjct: 564 YCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWS 623

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
             T+ ++           EA ++   + +K+
Sbjct: 624 IYTYNIILNGLSKNNCVDEALKMFQSLCSKD 654



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 222/484 (45%), Gaps = 36/484 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++ L +      A+ +F  +I+ G +P++VTYT L+       ++  +  ++ 
Sbjct: 239 VVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLK 298

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G++PD   +  +++   + G   EA   F  M   G+ P  S Y  ++ GY   G
Sbjct: 299 EMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKG 358

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E    LDLM   G + PN   +N++  A+  +  I EA ++ +KM   G+ P+VV Y
Sbjct: 359 ALSEMHSFLDLMVGNG-ISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNY 417

Query: 252 NTIATAYAQNGEADQAE-----------------------------------EVIVEMEH 276
            T+  A  + G  D AE                                   E+  EM +
Sbjct: 418 ATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVN 477

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G+ PN      I+   C EG++ +A R    M+  G  P+++ +N LI+G   +   D 
Sbjct: 478 QGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDE 537

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             ++L +M    + P+  TY+T+++ +   G +D    +F +M   GI P    Y+ +  
Sbjct: 538 ASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILH 597

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  + +   +A+EL + MI SG   ++  +  I++G   +  +D A+++F  +C   +  
Sbjct: 598 GLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQV 657

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           ++ TF  ++    +  +   A  +   + A G+ P  +T+ L+AE     G  +E   + 
Sbjct: 658 DIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMF 717

Query: 517 SKIK 520
           S+++
Sbjct: 718 SEME 721



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/480 (25%), Positives = 221/480 (46%), Gaps = 18/480 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L ++GK  EA+ +F+++I  G KP +  Y  +L     +   + +HS +  +  NG
Sbjct: 315 LLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNG 374

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   FN V  AF++   + EAMD F KM++ GL+P    Y TLI      G+ +++ 
Sbjct: 375 ISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAE 434

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
              + M  EG V PN+  +  LV   C      +A  +  +M   G+ P+VV +NTI   
Sbjct: 435 LKFNQMINEG-VAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCN 493

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G   +A+ +I  ME  G +P+  +   +I G+C  GK  EA +    M   G+ PN
Sbjct: 494 LCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPN 553

Query: 318 LVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCK 373
              +N L+ G+     RDG +D+  ++ +E   N   P V+TY+TI++         + K
Sbjct: 554 ECTYNTLLHGYC----RDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAK 609

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E++ +M  +G +   + Y+I+  G  +    ++A ++  ++       +++ F  +I   
Sbjct: 610 ELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGAL 669

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
             DG  + A+ +F  +  +G+ P++ T+  +     E       + +   M+  G  P  
Sbjct: 670 LKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNS 729

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNKERTNE---------MEAEEDIPVESLERLYH 544
                L       G    A   LSKI  K  + E         + + E+   +SL   YH
Sbjct: 730 LMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAKSLPEKYH 789



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 219/450 (48%), Gaps = 6/450 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGG-HKPSLVTYTTLLAALTIQKRFN-SIHSI 129
           V + + L+      G+ +   A F  +++ G     +V    LL  L   KR   ++  +
Sbjct: 94  VFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVGEAMGVL 153

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT---PTTSTYNTLIKG 186
           + ++ E G  P+ + +N ++  F +    EEA++    M +  +    P   +YNT+I G
Sbjct: 154 LRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVING 213

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
           +   G+ +++  L   M+ +G + PN+ TY +++   C  + +  A  V  +M   G++P
Sbjct: 214 FFTEGQVDKAYNLFLDMTDQG-IPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRP 272

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           ++VTY  +   Y   G+  +   ++ EM  +G++P+  T G+++   CK+GK  EA +  
Sbjct: 273 NIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLF 332

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
            +M   G+ P++ I+ +++ G+        +   L LM    ++P+   ++ +  A++  
Sbjct: 333 DSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKK 392

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             + +  +IF+ M + G+ P+   Y+ L     +    + AE     MI  G  PN+V+F
Sbjct: 393 AMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVF 452

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           T+++ G C+    ++A E+F +M   G+ PN+  F T+M       +  +A+ ++ +M+ 
Sbjct: 453 TSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMER 512

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
            G  P   ++  L       G T EA ++L
Sbjct: 513 VGTRPDIISYNALIRGHCLVGKTDEASKLL 542



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 171/356 (48%), Gaps = 4/356 (1%)

Query: 171 SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
           S + P   TY+ L+  +   G+ E       L+ + G    ++   N L++  C+ K + 
Sbjct: 88  SKVAPDVFTYSILVGCFCRMGRLEHGFAAFGLILKTGWRVNDVVVVNRLLKGLCDAKRVG 147

Query: 231 EAWNVM-HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ---PNGRTC 286
           EA  V+  +M+  G  P+VV+YNT+   +     A++A E++  M    V+   PN  + 
Sbjct: 148 EAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSY 207

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             +I+G+  EG++ +A      M + G+ PN+V + ++I G  +    D  + V   M +
Sbjct: 208 NTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMID 267

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             V P+++TY+ +++ + + G   +   +  +M   G++PD   Y +L     ++ +  +
Sbjct: 268 KGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTE 327

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A +L  +MI  G  P+V I+  I+ G+ + G++       D M  +G+SPN   F  +  
Sbjct: 328 ARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFC 387

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            +++      A +I   M+  G+ P    +  L +A    G   +A+   +++ N+
Sbjct: 388 AFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINE 443


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 137/507 (27%), Positives = 239/507 (47%), Gaps = 15/507 (2%)

Query: 33  PAKKNNPGE---KKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIE----- 84
           PA+ + P     +++L S +   D          + +++    R + +L+++L       
Sbjct: 102 PARPSPPAHAAFRERLRSGTLGPDDARHLFDELLLRRDAPAPARGLNELLSALARAPPSA 161

Query: 85  --RGKPQEAQAIFNNLIEGG---HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
             R  P  A  +F  +         P++ TY  L+      +R +    +  ++   G+ 
Sbjct: 162 ACRDVPALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLG 221

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD   +NA+I+ FS+ G +++A D F+KM+E G+ P   TY++LI G     + +++ ++
Sbjct: 222 PDVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERV 281

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           L  M   G V+PN  TYN L+  +       E+  V  +M++S + PDV   N+  TA  
Sbjct: 282 LRQMVGAG-VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALC 340

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           ++G   +A ++   M   G +P+  + G ++ GY   G I         M   GV P+  
Sbjct: 341 KHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRH 400

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           +FN LI  +  +   D    +   M +  VNPD+IT+ST+++A+   G +D   E F+ M
Sbjct: 401 VFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHM 460

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV-IFTTIISGWCSDGS 438
              G+ PD   YS L +G    ++  KA+EL+  M+  G  P  +  FT+II+  C +G 
Sbjct: 461 IDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGR 520

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +    +V D +   G  PNL TF +L+ GY        A  +L  M++ GV P   T+  
Sbjct: 521 VAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNT 580

Query: 499 LAEARRATGLTKEAKRILSKIKNKERT 525
           L +     G   +A  +   + +K  T
Sbjct: 581 LVDGYCKHGRIDDALTLFRDMLHKRVT 607



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/493 (24%), Positives = 222/493 (45%), Gaps = 37/493 (7%)

Query: 63  CMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           C   E+  T+ +   L+N      +P     +F  L+  G  P + +Y  L+   + +  
Sbjct: 180 CACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGE 239

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +  H +  ++EE G+ P+ + ++++IN   ++  M++A     +M  +G+ P   TYN 
Sbjct: 240 VDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNC 299

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY  +G  +ESV++   MS    V P++   N  + A C    I EA ++   M   
Sbjct: 300 LIHGYSTSGMWKESVRVFKEMSSSLLV-PDVGNCNSFMTALCKHGRIKEARDIFDSMVLK 358

Query: 243 GMKPDVVTY-----------------------------------NTIATAYAQNGEADQA 267
           G KPDV++Y                                   NT+  AYA+ G  D++
Sbjct: 359 GPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKS 418

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
             +  +M   GV P+  T   +IS +C+ G++ +A+     M + GV P+  +++ LI+G
Sbjct: 419 LLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQG 478

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYST-IMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
                D     E+++ M    + P  I + T I+N     G + + K++ D +   G +P
Sbjct: 479 QCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRP 538

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           +   ++ L  GY      ++A  LL +M   G  P++  + T++ G+C  G +D A+ +F
Sbjct: 539 NLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLF 598

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
             M    V+    ++  ++ G  +AR+   A+E+   M   G+     T+  +       
Sbjct: 599 RDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRN 658

Query: 507 GLTKEAKRILSKI 519
             T EA  +L K+
Sbjct: 659 NCTDEANMLLEKL 671



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/500 (21%), Positives = 223/500 (44%), Gaps = 47/500 (9%)

Query: 64  MNKESCRTVRSMTK------------LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYT 111
           M KES R  + M+              M +L + G+ +EA+ IF++++  G KP +++Y 
Sbjct: 309 MWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYG 368

Query: 112 TLL----------------------AALTIQKRFNSIHS-------------IMSQVEEN 136
            LL                        +  +  FN++ +             +   + + 
Sbjct: 369 ALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQ 428

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G++PD I F+ VI+AF   G +++AM+ F  M ++G+ P T+ Y+ LI+G        ++
Sbjct: 429 GVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKA 488

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            +L+  M  +G   P ++ +  ++   C E  + E  +V+  +  +G +P+++T+N++  
Sbjct: 489 KELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVD 548

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y   G   +A  ++  ME  GV+P+  T   ++ GYCK G+I +AL   R M    V  
Sbjct: 549 GYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTL 608

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
             V +N+++ G  +        E+   M E  +   + TY+T++         D+   + 
Sbjct: 609 TSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLL 668

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           + +    +K D   ++I+ +   +    ++A+EL   +   G  P ++ +  +I+    +
Sbjct: 669 EKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKE 728

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            S + A  +F  M +   +P+ +    ++       +  +A   L  +   G+ P+ +T 
Sbjct: 729 ESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTT 788

Query: 497 LLLAEARRATGLTKEAKRIL 516
            LL       G  +E  ++L
Sbjct: 789 SLLIYLFSVNGKYREYIKLL 808


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 218/443 (49%), Gaps = 11/443 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++++L ++G   E+ A+   +++ G   +  T    +  L    R   +   ++
Sbjct: 211 VATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGR---LEEAVA 267

Query: 132 QVEENG--MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
            VE  G  + PD + +N ++    +   ++EA     +M   G  P   TYNT+I GY  
Sbjct: 268 LVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCK 327

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +G  +E+ +LL     +G V P+  TY  L+   C E +I  A  + ++  A  +KPD+V
Sbjct: 328 SGMLQEATELLKDAVFKGFV-PDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLV 386

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            YN++     + G    A +V+ EM   G  P+  T  III+G CK G I +A       
Sbjct: 387 VYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDA 446

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G  P++  FN LI G+ + +  D   +++  M  + + PDVITY++++N    AG  
Sbjct: 447 IVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKA 506

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +  E F++M   G +P+A  Y+IL + + +  + E+A  +++ M + G  P+ V F T+
Sbjct: 507 KEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTL 566

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G+C +G +D A  +F K+ E G S    TF  L+  YS       AE+I   M + G 
Sbjct: 567 IHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGY 626

Query: 490 HPQKSTFLLLAEARRATGLTKEA 512
            P   T+ +L +     GL K A
Sbjct: 627 KPDLYTYRILVD-----GLCKAA 644



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 199/421 (47%), Gaps = 1/421 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM  L +  K QEA      ++  G  P   TY T++              ++ 
Sbjct: 280 VVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLK 339

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
                G  PD + + ++IN     G++E A++ F + +   L P    YN+L+KG    G
Sbjct: 340 DAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 399

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++++++ M  EG   P++ TYN+++   C   NI++A  VM+     G  PDV T+
Sbjct: 400 LILHALQVMNEMVEEG-CHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTF 458

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   Y +  + D A +++  M   G+ P+  T   +++G CK GK KE       M  
Sbjct: 459 NTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMIL 518

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PN + +N+LI+ F +I   +    V+  M +  + PD ++++T+++ +   G +D 
Sbjct: 519 KGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDG 578

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F  + + G    A  ++IL   Y  +   + AE++   MI  G+ P++  +  ++ 
Sbjct: 579 AYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRILVD 638

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C   ++DRA     +M   G  P++ TF  ++   +   +   A  I+ IM   GV P
Sbjct: 639 GLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMVRMGVVP 698

Query: 492 Q 492
           +
Sbjct: 699 E 699



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 206/454 (45%), Gaps = 10/454 (2%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+ T  + S    G+P  A  +  +L E G       Y T++  L       +   +  +
Sbjct: 142 RTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDE 201

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +    + PD   FN V++A  + G++ E+     K+ + G++    T N  I+G    G+
Sbjct: 202 MLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGR 261

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            EE+V L++ M     V P++ TYN L+R  C +  + EA   + +M   G  PD  TYN
Sbjct: 262 LEEAVALVERMG--AYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYN 319

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           TI   Y ++G   +A E++ +    G  P+  T   +I+G C EG I+ AL      +  
Sbjct: 320 TIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAK 379

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVD----EVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
            + P+LV++N L+KG      R G+     +V+  M E   +PD+ TY+ I+N     G 
Sbjct: 380 DLKPDLVVYNSLVKGLC----RQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGN 435

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +     + +D    G  PD   ++ L  GY +  + + A +L+  M   G  P+V+ + +
Sbjct: 436 ISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNS 495

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +++G C  G      E F++M   G  PN  T+  L+  + +  Q   A  ++  M   G
Sbjct: 496 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDG 555

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           + P   +F  L       G    A  +  K+  K
Sbjct: 556 LVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEK 589



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 208/439 (47%), Gaps = 10/439 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++   + G  QEA  +  + +  G  P  VTY +L+  L  +        + ++ +   
Sbjct: 321 IIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKD 380

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +N+++      G +  A+    +M E G  P   TYN +I G    G   ++ 
Sbjct: 381 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAA 440

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +++    +G + P++ T+N L+  +C    +  A  ++ +M   G+ PDV+TYN++   
Sbjct: 441 VVMNDAIVKGYL-PDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNG 499

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+A +  E   EM   G +PN  T  I+I  +CK  +++EA      M + G+ P+
Sbjct: 500 LCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPD 559

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V FN LI GF    D DG   +   + E   +    T++ ++ A+S+   M   ++IF 
Sbjct: 560 AVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFG 619

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G KPD + Y IL  G  +    ++A   L  MI  GF P++  F  +++    + 
Sbjct: 620 EMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNH 679

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL--QIMKAFGVHPQKST 495
            +  A+ +   M   GV P  +  +T++   S  ++   A +IL  ++MK    H     
Sbjct: 680 RVSEAVAIIHIMVRMGVVP--EVVDTIL---STDKKEIAAPKILVEELMKKG--HISYRA 732

Query: 496 FLLLAEARRATGLTKEAKR 514
           + +L E  R   LT++A++
Sbjct: 733 YEVLHEGVRDNKLTRKARK 751



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 196/424 (46%), Gaps = 2/424 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M++L+      +A  ++  ++  G  P   T+T  L +  +  R +    ++  + E G
Sbjct: 112 IMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERG 171

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            D     +  V+      G+   A   F +M    + P  +T+N ++      G   ES 
Sbjct: 172 CDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESG 231

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  + + G +  N  T N+ +R  C +  + EA  ++ +M A  + PDVVTYNT+   
Sbjct: 232 ALLAKVLKRG-MSANKFTCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRG 289

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             ++ +  +A + +  M + G  P+  T   II GYCK G ++EA    +     G  P+
Sbjct: 290 LCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPD 349

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +  LI G     D +   E+    +   + PD++ Y++++      G +    ++ +
Sbjct: 350 RVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMN 409

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M + G  PD   Y+I+  G  +      A  ++   I  G+ P+V  F T+I G+C   
Sbjct: 410 EMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRL 469

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D A+++ ++M  +G++P++ T+ +++ G  +A +     E  + M   G  P   T+ 
Sbjct: 470 KLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYN 529

Query: 498 LLAE 501
           +L E
Sbjct: 530 ILIE 533



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 196/416 (47%), Gaps = 12/416 (2%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+ + A   F  +      P+   Y  ++ AL      +  H +  ++   G+ PD+   
Sbjct: 85  GRLRAAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTH 144

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD-LMS 204
              + +F  +G    A+     + E G     + Y T+++G    G    +  L D ++ 
Sbjct: 145 TVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLG 204

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R+  V P++ T+N ++ A C + ++ E+  ++ K+   GM  +  T N       ++G  
Sbjct: 205 RD--VFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDG-- 260

Query: 265 DQAEEVIVEMEHNG--VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
            + EE +  +E  G  V P+  T   ++ G CK+ K++EA ++   M   G  P+   +N
Sbjct: 261 -RLEEAVALVERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYN 319

Query: 323 LLIKGFVEIMDRDGVDEVL--ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
            +I G+ +        E+L  A+ K F   PD +TY +++N     G +++  E+F++  
Sbjct: 320 TIIDGYCKSGMLQEATELLKDAVFKGFV--PDRVTYCSLINGLCAEGDIERALELFNEAQ 377

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
              +KPD   Y+ L KG  R+     A +++  M+E G HP++  +  II+G C  G++ 
Sbjct: 378 AKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNIS 437

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            A  V +     G  P++ TF TL+ GY +  +   A ++++ M  +G+ P   T+
Sbjct: 438 DAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITY 493



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 80/350 (22%), Positives = 146/350 (41%), Gaps = 5/350 (1%)

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR--TYNVLVRAWCNEKNITEAW 233
           T   Y  LI+    AG+ ++    L   S   ++ P+     Y   ++A+     +  A 
Sbjct: 34  TIPAYRALIRELVSAGRLDDVDAAL--ASARSHLAPDSLQPLYVASIQAYARAGRLRAAV 91

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
           +   +M      P    YN I  A       DQA +V V M   GV P+ RT  + +  +
Sbjct: 92  DAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSF 151

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           C  G+   ALR  R++ E G       +  +++G            +   M    V PDV
Sbjct: 152 CLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDV 211

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
            T++ +++A    G + +   +   + K G+  +    +I  +G   +   E+A  L+  
Sbjct: 212 ATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVER 271

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M  +   P+VV + T++ G C D  +  A +   +M   G  P+  T+ T++ GY ++  
Sbjct: 272 M-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGM 330

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
              A E+L+     G  P + T+  L     A G  + A  + ++ + K+
Sbjct: 331 LQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKD 380


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 219/445 (49%), Gaps = 4/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N +   G+  +A+ + N L   G +P  V+YTTLL  L   KR++ +  + +++ E  
Sbjct: 218 IINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKN 277

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + F+ +I  F   G +E A+    +M E      T+  N +I      G+ +++ 
Sbjct: 278 CMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAF 337

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K L+ M   G   P+  +Y  +++  C  +   +A  ++ +M  +   P+ VT+NT    
Sbjct: 338 KFLNNMGSYG-CNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICI 396

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             Q G  +QA  +I +M+ +G      T   +++G+C +G I  AL   R+M      PN
Sbjct: 397 LCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP---CKPN 453

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +  L+ G       D   E++A M      P+V+T++ ++N +   GF+D+  E+ +
Sbjct: 454 TITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVE 513

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + G  P+   Y+ L  G  ++   E A ELL  ++  G  P+V+ F++II     + 
Sbjct: 514 QMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSPDVITFSSIIGILSKED 573

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ AI++F    + G+ P    +  ++ G  +  +   A + L  M + G  P +ST++
Sbjct: 574 RVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFLAYMVSNGCMPNESTYI 633

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
           +L E     GL KEA+ +LS + ++
Sbjct: 634 ILIEGLAREGLLKEAQDLLSMLCSR 658



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 218/488 (44%), Gaps = 71/488 (14%)

Query: 76  TKLMNSLIERGKPQEAQAI---------------FNNLIEG----GH------------- 103
           TKL+ +L  RG+  +A  +               +N L+ G    GH             
Sbjct: 79  TKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPV 138

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
            P   TYT L+  L  + R     S++  +   G  P+ + +  ++ A  ++   E+AM 
Sbjct: 139 APDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMA 198

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              +M+  G TP   TYN +I G    G+ +++  LL+ +   G  +P+  +Y  L++  
Sbjct: 199 VLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYG-CQPDTVSYTTLLKGL 257

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C  K   +   +  +M      P+ VT++ +   + + G  ++A +V+ +M  +    N 
Sbjct: 258 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNT 317

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG---------------- 327
             C I+I+  CK+G++ +A +F   M  YG +P+ + +  ++KG                
Sbjct: 318 TLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKE 377

Query: 328 ---------------FVEIMDRDGVDE----VLALMKEFRVNPDVITYSTIMNAWSTAGF 368
                          F+ I+ + G+ E    ++  M+E      V+TY+ ++N +   G 
Sbjct: 378 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGH 437

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D   E+F  M     KP+   Y+ L  G    +  + A EL+  M+     PNVV F  
Sbjct: 438 IDSALELFRSM---PCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNV 494

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +++ +C  G +D AIE+ ++M EHG +PNL T+ TL  G ++      A E+L  + + G
Sbjct: 495 LVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKG 554

Query: 489 VHPQKSTF 496
           V P   TF
Sbjct: 555 VSPDVITF 562



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 174/399 (43%), Gaps = 42/399 (10%)

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +G  PD      +I      G   +A       + SG       YNTL+ GY   G  + 
Sbjct: 69  DGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDA 128

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +L+  M     V P+  TY  L+R  C+   + +A +++  M   G +P+VVTY  + 
Sbjct: 129 ARRLIGSMP----VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 184

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            A  +N   +QA  V+ EM   G  PN  T  +II+G C+EG++ +A      +  YG  
Sbjct: 185 EAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQ 244

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK---- 371
           P+ V +  L+KG       D V+E+ A M E    P+ +T+  ++  +   G +++    
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 304

Query: 372 -----------------------CKE--------IFDDMGKAGIKPDAHAYSILAKGYVR 400
                                  CK+          ++MG  G  PD  +Y+ + KG  R
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCR 364

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
            +    A+ELL  M+ +   PN V F T I   C  G +++AI + ++M EHG +  + T
Sbjct: 365 AERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVT 424

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           +  L+ G+         +  L++ ++    P   T+  L
Sbjct: 425 YNALVNGFCVQ---GHIDSALELFRSMPCKPNTITYTTL 460



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/358 (24%), Positives = 164/358 (45%), Gaps = 14/358 (3%)

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P ++    LI    +AG    + +L++L +      P++     L+R  C     ++A  
Sbjct: 41  PASARLRRLIAREDLAG----AARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAAR 96

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           V+     SG   DV  YNT+   Y + G  D A  +I  M    V P+  T   +I   C
Sbjct: 97  VLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMP---VAPDAYTYTPLIRVLC 153

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNP 351
             G++ +AL     M   G  PN+V + +L++   +     G ++ +A++ E R     P
Sbjct: 154 DRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCK---NSGFEQAMAVLDEMRAKGCTP 210

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           +++TY+ I+N     G +D  +++ + +   G +PD  +Y+ L KG    +  +  EEL 
Sbjct: 211 NIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELF 270

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M+E    PN V F  +I  +C  G ++RAI+V  +M EH  + N      ++    + 
Sbjct: 271 AEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQ 330

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK-IKNKERTNEM 528
            +   A + L  M ++G +P   ++  + +         +AK +L + ++N    NE+
Sbjct: 331 GRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEV 388



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 157/350 (44%), Gaps = 6/350 (1%)

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP-NLRTYNVLVRAWCNEKNIT 230
           G  P       LI+     G+  ++ ++L   + EG+  P ++  YN LV  +C   ++ 
Sbjct: 70  GEAPDVYLCTKLIRNLCRRGRTSDAARVLR--AAEGSGSPVDVFAYNTLVAGYCRYGHLD 127

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
            A  ++  M  +   PD  TY  +       G    A  ++ +M   G QPN  T  +++
Sbjct: 128 AARRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLL 184

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
              CK    ++A+     M+  G  PN+V +N++I G       D   ++L  +  +   
Sbjct: 185 EAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQ 244

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           PD ++Y+T++     +   D  +E+F +M +    P+   + +L + + R    E+A ++
Sbjct: 245 PDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQV 304

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           L  M E     N  +   +I+  C  G +D A +  + M  +G +P+  ++ T++ G   
Sbjct: 305 LQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCR 364

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           A +   A+E+L+ M      P + TF          GL ++A  ++ +++
Sbjct: 365 AERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQ 414



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 85/183 (46%), Gaps = 5/183 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N   ++G   EA  +   ++E G  P+L+TY TL   +T          ++ 
Sbjct: 489 VVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLH 548

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ PD I F+++I   S+   +EEA+  F   ++ G+ P    YN ++ G     
Sbjct: 549 GLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRH 608

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + ++  L  M   G   PN  TY +L+     E  + EA +++  + + G    VV+ 
Sbjct: 609 EIDNAIDFLAYMVSNG-CMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRG----VVSK 663

Query: 252 NTI 254
           N I
Sbjct: 664 NLI 666


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 220/425 (51%), Gaps = 3/425 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L    K  EA  +   ++E G +P++VTY +++  +      +    ++ +++E  
Sbjct: 141 LINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERN 200

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   ++ +I++    G ++ A+  F +M+  G+  +  TYN+L+ G   AGK  + V
Sbjct: 201 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGV 260

Query: 198 KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +LL D+ SR+  + PN+ T+NVL+  +  E  + EA  +  +M   G+ P+ +TYN++  
Sbjct: 261 QLLKDMTSRK--IIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMD 318

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y       +A  ++  M  N   P+  T   +I GYCK  ++ E ++  R + + G+  
Sbjct: 319 GYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVA 378

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N V +++L++GF +    +  +E+   M    V PDV+TY  +++     G ++K  EIF
Sbjct: 379 NTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIF 438

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           +D+ K+ +  D   Y+I+ +G  +  + E A  L  ++   G  PNV+ +T +ISG C  
Sbjct: 439 EDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 498

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           GS+  A  +  KM E G  PN  T+ TL+  +        + ++++ MK+ G     S+ 
Sbjct: 499 GSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 558

Query: 497 LLLAE 501
            ++ +
Sbjct: 559 KMVID 563



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 221/448 (49%), Gaps = 8/448 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + ++  ++N      K   A ++   +++ G++P   T+ TL+  L ++ + +    +++
Sbjct: 100 IYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVA 159

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ ENG  P+ + +N+++N   +SG+   A+D   KM E  +     TY+T+I      G
Sbjct: 160 RMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDG 219

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + ++ L   M  +G +K +L TYN LV   C      +   ++  M +  + P+V+T+
Sbjct: 220 CIDAAISLFKEMETKG-IKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITF 278

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   + + G+  +A E+  EM   G+ PN  T   ++ GYC + ++ EA      M  
Sbjct: 279 NVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVR 338

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
               P++V F  LIKG+ ++     VDE + L ++     +  + +TYS ++  +  +G 
Sbjct: 339 NNCSPDIVTFTSLIKGYCKV---KRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGK 395

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           ++  +E+F +M   G+ PD   Y IL  G     + EKA E+   + +S  + ++V++T 
Sbjct: 396 LEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTI 455

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           II G C  G ++ A  +F  +   GV PN+ T+  ++ G  +      A  +L+ M+  G
Sbjct: 456 IIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDG 515

Query: 489 VHPQKSTFLLLAEARRATG-LTKEAKRI 515
             P   T+  L  A    G LT  AK I
Sbjct: 516 NEPNDCTYNTLIRAHLRDGDLTASAKLI 543



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 112/426 (26%), Positives = 210/426 (49%), Gaps = 1/426 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A  +F  +I     PSLV ++   + +   K+FN +     ++E NG+  +    N
Sbjct: 45  KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLN 104

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN F        A     K+ + G  P T+T+NTLI G  +  K  E+V L+  M   
Sbjct: 105 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN 164

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +PN+ TYN +V   C   + + A +++ KM    +K DV TY+TI  +  ++G  D 
Sbjct: 165 G-CQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDA 223

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  +  EME  G++ +  T   ++ G CK GK  + ++  + M    + PN++ FN+LI 
Sbjct: 224 AISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLID 283

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
            FV+       +E+   M    ++P+ ITY+++M+ +     + +   + D M +    P
Sbjct: 284 VFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSP 343

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   ++ L KGY + +  ++  +L   + + G   N V ++ ++ G+C  G ++ A E+F
Sbjct: 344 DIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELF 403

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            +M   GV P++ T+  L+ G  +  +  +A EI + ++   ++     + ++ E     
Sbjct: 404 QEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKG 463

Query: 507 GLTKEA 512
           G  ++A
Sbjct: 464 GKVEDA 469



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/295 (27%), Positives = 148/295 (50%), Gaps = 1/295 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++  ++ GK QEA  ++  +I  G  P+ +TY +L+    +Q R +  ++++ 
Sbjct: 275 VITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLD 334

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  N   PD + F ++I  + +   ++E M  F K+ + GL   T TY+ L++G+  +G
Sbjct: 335 LMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSG 394

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K E + +L   M   G V P++ TY +L+   C+   + +A  +   +  S M  D+V Y
Sbjct: 395 KLEIAEELFQEMVSLG-VLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMY 453

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             I     + G+ + A  +   +   GV+PN  T  ++ISG CK+G + EA    R M+E
Sbjct: 454 TIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 513

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
            G  PN   +N LI+  +   D     +++  MK    + D  +   +++  S+A
Sbjct: 514 DGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLSSA 568



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 64/281 (22%), Positives = 120/281 (42%)

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
           SG+    V Y     +   + + D A ++  EM  +   P+        SG     +   
Sbjct: 24  SGISDGRVCYGERLRSGIVDIKEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNL 83

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
            L F + M+  G+  N+   N++I  F           VL  + +    PD  T++T++N
Sbjct: 84  VLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIN 143

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                  + +   +   M + G +P+   Y+ +  G  +  +   A +LL  M E     
Sbjct: 144 GLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKA 203

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +V  ++TII   C DG +D AI +F +M   G+  +L T+ +L+ G  +A +     ++L
Sbjct: 204 DVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLL 263

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           + M +  + P   TF +L +     G  +EA  +  ++  K
Sbjct: 264 KDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITK 304


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 227/447 (50%), Gaps = 3/447 (0%)

Query: 78  LMNSLIERG-KPQEAQAIFNNL-IEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           ++N++ ++G    EA  +  +L    G  P +V+Y  +L  L + KR+  +  +M ++  
Sbjct: 194 VLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVR 253

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P+ + FN +I     +G  E       +M + G TP    Y T++ G    G  E 
Sbjct: 254 VGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEV 313

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + ++LD M   G +KPN+  YN +++  C+ +   +A  ++ +M  +    D VT+N + 
Sbjct: 314 AHEILDRMPSYG-LKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILV 372

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + QNG   +  E++ +M  +G  P+  T   +I+G+CKEG I EA+   ++M   G  
Sbjct: 373 DFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCR 432

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN + + +++KG          +++++ M E   +P+ +T++T++N     G +++  E+
Sbjct: 433 PNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIEL 492

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
              M   G  PD  +YS +  G  +  + ++A ELL  M+  G  PN +I+++I S    
Sbjct: 493 LKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSK 552

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G ++R I++FD + +  +  +   +  ++    +     RA E L  M + G  P +ST
Sbjct: 553 EGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNEST 612

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNK 522
           + +L     + G  KEA+ +L+++ +K
Sbjct: 613 YTILIRGLASEGFVKEAQEMLTELCSK 639



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 206/456 (45%), Gaps = 39/456 (8%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE---SGNMEEA 161
           P+  TY  ++ AL  + R     S++ ++   G  P    ++ ++ A       G    A
Sbjct: 113 PNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFRSA 172

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGY-GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           +     +   G        N ++       G  +E+++LL  +       P++ +YN ++
Sbjct: 173 VRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNAVL 232

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           +  C  K      ++M +M   G  P+VVT+NT+     +NG  ++  +V+ +M  +G  
Sbjct: 233 KGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCT 292

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV----------- 329
           P+ R    ++ G CKEG ++ A      M  YG+ PN+V +N ++KG             
Sbjct: 293 PDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEEL 352

Query: 330 --EIMDRDG----------------------VDEVLALMKEFRVNPDVITYSTIMNAWST 365
             E+ D D                       V E+L  M E    PDVITY+T++N +  
Sbjct: 353 LAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCK 412

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G +D+   +   M   G +P+  +Y+I+ KG    +    AE+L+  MIE G  PN V 
Sbjct: 413 EGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVT 472

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           F T+I+  C  G +++AIE+  +M  +G SP+L ++ T++ G  +A +   A E+L +M 
Sbjct: 473 FNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 532

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             G+ P    +  +A A    G      ++   I++
Sbjct: 533 NKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQD 568



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 189/399 (47%), Gaps = 36/399 (9%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
             Q +   ++  G  P++VT+ TL+  L     F  +H +++Q+ ++G  PD   +  V+
Sbjct: 243 RVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVL 302

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES------------- 196
           +   + G++E A +   +M   GL P    YNT++KG   A + E++             
Sbjct: 303 DGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCP 362

Query: 197 ----------------------VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
                                 ++LL+ M   G V P++ TY  ++  +C E  I EA  
Sbjct: 363 LDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCV-PDVITYTTVINGFCKEGLIDEAVM 421

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           ++  MAA G +P+ ++Y  +            AE+++ +M   G  PN  T   +I+  C
Sbjct: 422 LLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLC 481

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           K+G +++A+   + M   G  P+L+ ++ +I G  +    D   E+L +M    ++P+ I
Sbjct: 482 KKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTI 541

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
            YS+I +A S  G +++  ++FD++    I+ DA  Y+ +     +    ++A E L  M
Sbjct: 542 IYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYM 601

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           + SG  PN   +T +I G  S+G +  A E+  ++C  G
Sbjct: 602 VSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/360 (26%), Positives = 164/360 (45%), Gaps = 44/360 (12%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           YN ++ GY  AG+   + +L    +    V PN  TY  +VRA C    I +A +V+ +M
Sbjct: 86  YNAMVSGYCRAGQLASARRL----AASVPVPPNAYTYFPVVRALCARGRIADALSVLDEM 141

Query: 240 AASGMKPDVVTYNTIATAYAQNGEAD---QAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
              G  P    Y+ I  A    G       A  V+ ++   G   +   C ++++  C +
Sbjct: 142 RRRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQ 201

Query: 297 -GKIKEALRFARTM-KEYGVHPNLVIFNLLIKG------------FVEIMDRDG------ 336
            G + EALR  R +   +G  P++V +N ++KG             +E M R G      
Sbjct: 202 GGSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVV 261

Query: 337 -----------------VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
                            V +VLA M +    PD+  Y+T+++     G ++   EI D M
Sbjct: 262 TFNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRM 321

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G+KP+   Y+ + KG    +  E+AEELL  M ++    + V F  ++  +C +G +
Sbjct: 322 PSYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLV 381

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
            R IE+ ++M EHG  P++ T+ T++ G+ +      A  +L+ M A G  P   ++ ++
Sbjct: 382 YRVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIV 441



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 75/137 (54%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + +++ L + GK  EA  + N ++  G  P+ + Y+++ +AL+ + R N +  +   +
Sbjct: 507 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNI 566

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++  +  D++ +NAVI++  + G  + A++    M  SG  P  STY  LI+G    G  
Sbjct: 567 QDVTIRSDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFV 626

Query: 194 EESVKLLDLMSREGNVK 210
           +E+ ++L  +  +G ++
Sbjct: 627 KEAQEMLTELCSKGALR 643


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 216/427 (50%), Gaps = 6/427 (1%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A A+F  +++    PS++ ++ LL+A+    +F+ + S+  Q++  G+  +   ++
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN F     +  A+    KM + G  P   T ++L+ GY  + +  E+V L+D M   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +PN  T+N L+         +EA  ++ +M A G +PD+VTY  +     + G+ D 
Sbjct: 181 G-YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 239

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  ++ +ME   ++P       II G CK   + +AL   + M+  G+ PN+V ++ LI 
Sbjct: 240 AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 299

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
                        +L+ M E ++NPDV T+S +++A+   G + + ++++D+M K  I P
Sbjct: 300 CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 359

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
               YS L  G+      ++A+++   M+     P+VV + T+I G+C    ++  +EVF
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            +M + G+  N  T+  L+ G  +A     A+EI + M + GV P   T+  L +     
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD----- 474

Query: 507 GLTKEAK 513
           GL K  K
Sbjct: 475 GLCKNGK 481



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 230/445 (51%), Gaps = 3/445 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L++ L    K  EA A+ + ++  G +P LVTY  ++  L  +   +   ++++++
Sbjct: 188 TFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKM 247

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+  ++P  + +N +I+   +  +M++A++ F +M+  G+ P   TY++LI      G+ 
Sbjct: 248 EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRW 307

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            ++ +LL D++ R+  + P++ T++ L+ A+  E  + EA  +  +M    + P +VTY+
Sbjct: 308 SDASRLLSDMIERK--INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYS 365

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++   +  +   D+A+++   M      P+  T   +I G+CK  +++E +   R M + 
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQR 425

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+  N V +N+LI+G  +  D D   E+   M    V P+++TY+T+++     G ++K 
Sbjct: 426 GLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKA 485

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             +F+ + ++ ++P  + Y+I+ +G  +  + E   +L   +   G  P+VV + T+ISG
Sbjct: 486 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISG 545

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C  GS + A  +F +M E G  PN   + TL+           + E+++ M++ G    
Sbjct: 546 FCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGD 605

Query: 493 KSTFLLLAEARRATGLTKEAKRILS 517
            ST  L+        L K    +LS
Sbjct: 606 ASTIGLVTNMLHDGRLDKSFLDMLS 630



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 221/444 (49%), Gaps = 3/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N    R +   A A+   +++ G++P++VT ++LL      KR +   +++ Q+   G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+++ FN +I+         EAM    +M   G  P   TY  ++ G    G  + + 
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ M  +G ++P +  YN ++   C  K++ +A N+  +M   G++P+VVTY+++ + 
Sbjct: 242 NLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 300

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G    A  ++ +M    + P+  T   +I  + KEGK+ EA +    M +  + P+
Sbjct: 301 LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 360

Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +V ++ LI GF  + DR D   ++   M      PDV+TY+T++  +     +++  E+F
Sbjct: 361 IVTYSSLINGFC-MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M + G+  +   Y+IL +G  +  + + A+E+   M+  G  PN++ + T++ G C +
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +++A+ VF+ +    + P + T+  ++ G  +A +     ++   +   GV P    +
Sbjct: 480 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 539

Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
             +       G  +EA  +  ++K
Sbjct: 540 NTMISGFCRKGSKEEADALFKEMK 563



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 218/450 (48%), Gaps = 1/450 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +++ L+N      +  EA A+ + +   G++P+ VT+ TL+  L +  + +   +++ 
Sbjct: 151 IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALID 210

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  PD + +  V+N   + G+ + A +   KM++  L P    YNT+I G     
Sbjct: 211 RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 270

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++++ L   M  +G ++PN+ TY+ L+   CN    ++A  ++  M    + PDV T+
Sbjct: 271 HMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 329

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  A+ + G+  +AE++  EM    + P+  T   +I+G+C   ++ EA +    M  
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 389

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
               P++V +N LIKGF +    +   EV   M +  +  + +TY+ ++     AG  D 
Sbjct: 390 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 449

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +EIF +M   G+ P+   Y+ L  G  +  + EKA  +   +  S   P +  +  +I 
Sbjct: 450 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 509

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G ++   ++F  +   GV P++  + T++ G+        A+ + + MK  G  P
Sbjct: 510 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 569

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKN 521
               +  L  AR   G  + +  ++ ++++
Sbjct: 570 NSGCYNTLIRARLRDGDREASAELIKEMRS 599



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 149/300 (49%), Gaps = 2/300 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+++ ++ GK  EA+ +++ +++    PS+VTY++L+    +  R +    +  
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +      PD + +N +I  F +   +EE M+ F +M + GL   T TYN LI+G   AG
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + + ++   M  +G V PN+ TYN L+   C    + +A  V   +  S M+P + TY
Sbjct: 446 DCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     + G+ +   ++   +   GV+P+      +ISG+C++G  +EA    + MKE
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PN   +N LI+  +   DR+   E++  M+      D  T   + N     G +DK
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD-GRLDK 623



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 159/323 (49%), Gaps = 1/323 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L   G+  +A  + +++IE    P + T++ L+ A   + +      +  
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +  +DP  + ++++IN F     ++EA   F  M      P   TYNTLIKG+    
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 410

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE +++   MS+ G V  N  TYN+L++      +   A  +  +M + G+ P+++TY
Sbjct: 411 RVEEGMEVFREMSQRGLVG-NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 469

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+     +NG+ ++A  V   ++ + ++P   T  I+I G CK GK+++       +  
Sbjct: 470 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 529

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P++V +N +I GF     ++  D +   MKE    P+   Y+T++ A    G  + 
Sbjct: 530 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 589

Query: 372 CKEIFDDMGKAGIKPDAHAYSIL 394
             E+  +M   G   DA    ++
Sbjct: 590 SAELIKEMRSCGFAGDASTIGLV 612



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 124/243 (51%), Gaps = 1/243 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ + + L+N      +  EA+ +F  ++     P +VTY TL+      KR      + 
Sbjct: 360 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 419

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G+  +++ +N +I    ++G+ + A + F +M   G+ P   TYNTL+ G    
Sbjct: 420 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 479

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK E+++ + + + R   ++P + TYN+++   C    + + W++   ++  G+KPDVV 
Sbjct: 480 GKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 538

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+ + + + G  ++A+ +  EM+ +G  PN      +I    ++G  + +    + M+
Sbjct: 539 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 598

Query: 311 EYG 313
             G
Sbjct: 599 SCG 601



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 114/228 (50%), Gaps = 1/228 (0%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F ++K     V +   L+    +  + +E   +F  + + G   + VTY  L+  L    
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 445

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
             +    I  ++  +G+ P+ + +N +++   ++G +E+AM  F  ++ S + PT  TYN
Sbjct: 446 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 505

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            +I+G   AGK E+   L   +S +G VKP++  YN ++  +C + +  EA  +  +M  
Sbjct: 506 IMIEGMCKAGKVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
            G  P+   YNT+  A  ++G+ + + E+I EM   G   +  T G++
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 612


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 216/427 (50%), Gaps = 6/427 (1%)

Query: 87   KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
            K  +A A+F  +++    PS++ ++ LL+A+    +F+ + S+  Q++  G+  +   ++
Sbjct: 675  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734

Query: 147  AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
             +IN F     +  A+    KM + G  P   T ++L+ GY  + +  E+V L+D M   
Sbjct: 735  ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794

Query: 207  GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            G  +PN  T+N L+         +EA  ++ +M A G +PD+VTY  +     + G+ D 
Sbjct: 795  G-YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDL 853

Query: 267  AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
            A  ++ +ME   ++P       II G CK   + +AL   + M+  G+ PN+V ++ LI 
Sbjct: 854  AFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLIS 913

Query: 327  GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
                         +L+ M E ++NPDV T+S +++A+   G + + ++++D+M K  I P
Sbjct: 914  CLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDP 973

Query: 387  DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
                YS L  G+      ++A+++   M+     P+VV + T+I G+C    ++  +EVF
Sbjct: 974  SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 1033

Query: 447  DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
             +M + G+  N  T+  L+ G  +A     A+EI + M + GV P   T+  L +     
Sbjct: 1034 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD----- 1088

Query: 507  GLTKEAK 513
            GL K  K
Sbjct: 1089 GLCKNGK 1095



 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 229/441 (51%), Gaps = 3/441 (0%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L++ L    K  EA A+ + ++  G +P LVTY  ++  L  +   +   ++++++E+  
Sbjct: 806  LIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGK 865

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            ++P  + +N +I+   +  +M++A++ F +M+  G+ P   TY++LI      G+  ++ 
Sbjct: 866  LEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDAS 925

Query: 198  KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            +LL D++ R+  + P++ T++ L+ A+  E  + EA  +  +M    + P +VTY+++  
Sbjct: 926  RLLSDMIERK--INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLIN 983

Query: 257  AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
             +  +   D+A+++   M      P+  T   +I G+CK  +++E +   R M + G+  
Sbjct: 984  GFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVG 1043

Query: 317  NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
            N V +N+LI+G  +  D D   E+   M    V P+++TY+T+++     G ++K   +F
Sbjct: 1044 NTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVF 1103

Query: 377  DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            + + ++ ++P  + Y+I+ +G  +  + E   +L   +   G  P+VV + T+ISG+C  
Sbjct: 1104 EYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRK 1163

Query: 437  GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            GS + A  +F +M E G  PN   + TL+           + E+++ M++ G     ST 
Sbjct: 1164 GSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTI 1223

Query: 497  LLLAEARRATGLTKEAKRILS 517
             L+        L K    +LS
Sbjct: 1224 GLVTNMLHDGRLDKSFLDMLS 1244



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 221/444 (49%), Gaps = 3/444 (0%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L+N    R +   A A+   +++ G++P++VT ++LL      KR +   +++ Q+   G
Sbjct: 736  LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 795

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              P+++ FN +I+         EAM    +M   G  P   TY  ++ G    G  + + 
Sbjct: 796  YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 855

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             LL+ M  +G ++P +  YN ++   C  K++ +A N+  +M   G++P+VVTY+++ + 
Sbjct: 856  NLLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISC 914

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                G    A  ++ +M    + P+  T   +I  + KEGK+ EA +    M +  + P+
Sbjct: 915  LCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPS 974

Query: 318  LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
            +V ++ LI GF  + DR D   ++   M      PDV+TY+T++  +     +++  E+F
Sbjct: 975  IVTYSSLINGFC-MHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 1033

Query: 377  DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             +M + G+  +   Y+IL +G  +  + + A+E+   M+  G  PN++ + T++ G C +
Sbjct: 1034 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 1093

Query: 437  GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            G +++A+ VF+ +    + P + T+  ++ G  +A +     ++   +   GV P    +
Sbjct: 1094 GKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAY 1153

Query: 497  LLLAEARRATGLTKEAKRILSKIK 520
              +       G  +EA  +  ++K
Sbjct: 1154 NTMISGFCRKGSKEEADALFKEMK 1177



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 107/450 (23%), Positives = 218/450 (48%), Gaps = 1/450 (0%)

Query: 72   VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
            + +++ L+N      +  EA A+ + +   G++P+ VT+ TL+  L +  + +   +++ 
Sbjct: 765  IVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALID 824

Query: 132  QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++   G  PD + +  V+N   + G+ + A +   KM++  L P    YNT+I G     
Sbjct: 825  RMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYK 884

Query: 192  KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              ++++ L   M  +G ++PN+ TY+ L+   CN    ++A  ++  M    + PDV T+
Sbjct: 885  HMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTF 943

Query: 252  NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            + +  A+ + G+  +AE++  EM    + P+  T   +I+G+C   ++ EA +    M  
Sbjct: 944  SALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVS 1003

Query: 312  YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
                P++V +N LIKGF +    +   EV   M +  +  + +TY+ ++     AG  D 
Sbjct: 1004 KHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDM 1063

Query: 372  CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             +EIF +M   G+ P+   Y+ L  G  +  + EKA  +   +  S   P +  +  +I 
Sbjct: 1064 AQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIE 1123

Query: 432  GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            G C  G ++   ++F  +   GV P++  + T++ G+        A+ + + MK  G  P
Sbjct: 1124 GMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLP 1183

Query: 492  QKSTFLLLAEARRATGLTKEAKRILSKIKN 521
                +  L  AR   G  + +  ++ ++++
Sbjct: 1184 NSGCYNTLIRARLRDGDREASAELIKEMRS 1213



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/482 (23%), Positives = 239/482 (49%), Gaps = 21/482 (4%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A +I   +++ G++P  VT  +L+     + R +   S++ ++ E G  PD + +NA+I+
Sbjct: 242 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 301

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           +  ++  + +A D F +++  G+ P   TY  L+ G   + +  ++ +LL  M ++  + 
Sbjct: 302 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KIT 360

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN+ TY+ L+ A+     + EA  +  +M    + PD+VTY+++      +   D+A ++
Sbjct: 361 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 420

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
              M   G   +  +   +I+G+CK  ++++ ++  R M + G+  N V +N LI+GF +
Sbjct: 421 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 480

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
             D D   E  + M  F ++PD+ TY+ ++      G ++K   IF+DM K  +  D   
Sbjct: 481 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 540

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ + +G  +  + E+A  L  ++   G  P++V +TT++SG C+ G +     ++ KM 
Sbjct: 541 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 600

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           + G+  N  T        S+      A E+++ M + G  P      LL + +  +G+ K
Sbjct: 601 QEGLMKNDCTL-------SDGDITLSA-ELIKKMLSCGYAPS-----LLKDIK--SGVCK 645

Query: 511 EAKRILSKIKNKERTNEME-----AEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSD 565
           +A  +L     K   +  E        ++ ++    L+ +   +  +P++++   ++S+ 
Sbjct: 646 KALSLLRAFSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAI 705

Query: 566 QK 567
            K
Sbjct: 706 AK 707



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 216/435 (49%), Gaps = 3/435 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A  +F+++++    PS+V +  LL+A+   K+++ + S+  ++E  G+  D   FN
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 227

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            VIN F     +  A+    KM + G  P   T  +L+ G+    +  ++V L+D M   
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  KP++  YN ++ + C  K + +A++   ++   G++P+VVTY  +      +     
Sbjct: 288 G-YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 346

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  ++ +M    + PN  T   ++  + K GK+ EA      M    + P++V ++ LI 
Sbjct: 347 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 406

Query: 327 GFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           G   + DR D  +++  LM       DV++Y+T++N +  A  ++   ++F +M + G+ 
Sbjct: 407 GLC-LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 465

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
            +   Y+ L +G+ +  + +KA+E    M   G  P++  +  ++ G C +G +++A+ +
Sbjct: 466 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 525

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F+ M +  +  ++ T+ T++ G  +  +   A  +   +   G+ P   T+  +      
Sbjct: 526 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 585

Query: 506 TGLTKEAKRILSKIK 520
            GL  E + + +K+K
Sbjct: 586 KGLLHEVEALYTKMK 600



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 91/366 (24%), Positives = 181/366 (49%), Gaps = 1/366 (0%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           + +A+D F  M +S   P+   +N L+       K +  + L   M   G ++ +L T+N
Sbjct: 169 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLG-IRNDLYTFN 227

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +++  +C    ++ A +++ KM   G +PD VT  ++   + +      A  ++ +M   
Sbjct: 228 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 287

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G +P+      II   CK  ++ +A  F + ++  G+ PN+V +  L+ G          
Sbjct: 288 GYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDA 347

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
             +L+ M + ++ P+VITYS +++A+   G + + KE+F++M +  I PD   YS L  G
Sbjct: 348 ARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLING 407

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
                  ++A ++   M+  G   +VV + T+I+G+C    ++  +++F +M + G+  N
Sbjct: 408 LCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSN 467

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
             T+ TL+ G+ +A    +A+E    M  FG+ P   T+ +L       G  ++A  I  
Sbjct: 468 TVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFE 527

Query: 518 KIKNKE 523
            ++ +E
Sbjct: 528 DMQKRE 533



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 149/300 (49%), Gaps = 2/300 (0%)

Query: 72   VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
            V + + L+++ ++ GK  EA+ +++ +++    PS+VTY++L+    +  R +    +  
Sbjct: 940  VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 999

Query: 132  QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
             +      PD + +N +I  F +   +EE M+ F +M + GL   T TYN LI+G   AG
Sbjct: 1000 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 1059

Query: 192  KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              + + ++   M  +G V PN+ TYN L+   C    + +A  V   +  S M+P + TY
Sbjct: 1060 DCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 1118

Query: 252  NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            N +     + G+ +   ++   +   GV+P+      +ISG+C++G  +EA    + MKE
Sbjct: 1119 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 1178

Query: 312  YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             G  PN   +N LI+  +   DR+   E++  M+      D  T   + N     G +DK
Sbjct: 1179 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD-GRLDK 1237



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 159/323 (49%), Gaps = 1/323 (0%)

Query: 72   VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
            V + + L++ L   G+  +A  + +++IE    P + T++ L+ A   + +      +  
Sbjct: 905  VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 964

Query: 132  QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++ +  +DP  + ++++IN F     ++EA   F  M      P   TYNTLIKG+    
Sbjct: 965  EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 1024

Query: 192  KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
            + EE +++   MS+ G V  N  TYN+L++      +   A  +  +M + G+ P+++TY
Sbjct: 1025 RVEEGMEVFREMSQRGLV-GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 1083

Query: 252  NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            NT+     +NG+ ++A  V   ++ + ++P   T  I+I G CK GK+++       +  
Sbjct: 1084 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 1143

Query: 312  YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             GV P++V +N +I GF     ++  D +   MKE    P+   Y+T++ A    G  + 
Sbjct: 1144 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 1203

Query: 372  CKEIFDDMGKAGIKPDAHAYSIL 394
              E+  +M   G   DA    ++
Sbjct: 1204 SAELIKEMRSCGFAGDASTIGLV 1226



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 112/492 (22%), Positives = 201/492 (40%), Gaps = 57/492 (11%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+    + G   +AQ  F+ +   G  P + TY  LL  L           I   +++  
Sbjct: 474 LIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKRE 533

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           MD D + +  VI    ++G +EEA   F  +   GL P   TY T++ G    G   E  
Sbjct: 534 MDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVE 593

Query: 198 KLLDLMSREGNVKPN------------------------------------------LRT 215
            L   M +EG +K +                                          LR 
Sbjct: 594 ALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRA 653

Query: 216 YN---------VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           ++          L R   +E  + +A  +  +M  S   P ++ ++ + +A A+  + D 
Sbjct: 654 FSGKTSYDYREKLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDV 713

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
              +  +M++ G+  N  T  I+I+ +C+  ++  AL     M + G  PN+V  + L+ 
Sbjct: 714 VISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLN 773

Query: 327 GFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           G+        + E +AL+ +  V    P+ +T++T+++         +   + D M   G
Sbjct: 774 GYCH---SKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 830

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
            +PD   Y ++  G  +  + + A  LL  M +    P V+I+ TII G C    MD A+
Sbjct: 831 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 890

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
            +F +M   G+ PN+ T+ +L+       +   A  +L  M    ++P   TF  L +A 
Sbjct: 891 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 950

Query: 504 RATGLTKEAKRI 515
              G   EA+++
Sbjct: 951 VKEGKLVEAEKL 962



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 124/243 (51%), Gaps = 1/243 (0%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            ++ + + L+N      +  EA+ +F  ++     P +VTY TL+      KR      + 
Sbjct: 974  SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 1033

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++ + G+  +++ +N +I    ++G+ + A + F +M   G+ P   TYNTL+ G    
Sbjct: 1034 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 1093

Query: 191  GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            GK E+++ + + + R   ++P + TYN+++   C    + + W++   ++  G+KPDVV 
Sbjct: 1094 GKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 1152

Query: 251  YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            YNT+ + + + G  ++A+ +  EM+ +G  PN      +I    ++G  + +    + M+
Sbjct: 1153 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 1212

Query: 311  EYG 313
              G
Sbjct: 1213 SCG 1215



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 114/228 (50%), Gaps = 1/228 (0%)

Query: 62   FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
            F ++K     V +   L+    +  + +E   +F  + + G   + VTY  L+  L    
Sbjct: 1000 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 1059

Query: 122  RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
              +    I  ++  +G+ P+ + +N +++   ++G +E+AM  F  ++ S + PT  TYN
Sbjct: 1060 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 1119

Query: 182  TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
             +I+G   AGK E+   L   +S +G VKP++  YN ++  +C + +  EA  +  +M  
Sbjct: 1120 IMIEGMCKAGKVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 1178

Query: 242  SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
             G  P+   YNT+  A  ++G+ + + E+I EM   G   +  T G++
Sbjct: 1179 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 1226



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/191 (19%), Positives = 89/191 (46%), Gaps = 1/191 (0%)

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           D +D + + M + R  P ++ ++ +++A       D    +   M   GI+ D + ++I+
Sbjct: 171 DAID-LFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIV 229

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
              +    +   A  +L  M++ G+ P+ V   ++++G+C    +  A+ + DKM E G 
Sbjct: 230 INCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGY 289

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            P++  +  ++    + ++   A +  + ++  G+ P   T+  L      +    +A R
Sbjct: 290 KPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAAR 349

Query: 515 ILSKIKNKERT 525
           +LS +  K+ T
Sbjct: 350 LLSDMIKKKIT 360


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 216/435 (49%), Gaps = 1/435 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++    G    A A+ +++   G KP +VTY ++L  L   +RF+    +   +++  
Sbjct: 198 LIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCS 257

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   FN +I  F   G ++EA+  + +M+   +TP   +++ LI  +   G+ + + 
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAG 317

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             L  M   G V P+   Y +++  +C   +++EA  V  +M   G  PDVVTYNT+   
Sbjct: 318 AYLREMKGLGLV-PDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNG 376

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +      AE+++ EME  GV P+  T   +I GYC++G  + AL+   T+    + P+
Sbjct: 377 LCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPD 436

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N LI G     D    +E+   M    + P+ ITYS ++++    G ++      D
Sbjct: 437 VVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLD 496

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K G  P+   Y+ + KGY R    +K ++ L  M +    P+++ F T+I G+  + 
Sbjct: 497 EMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEE 556

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
           +M  A  VF+ M +  V P+  T+  ++ G+SE      A  + + M   G+ P + T++
Sbjct: 557 NMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYM 616

Query: 498 LLAEARRATGLTKEA 512
            L       G +K+A
Sbjct: 617 SLINGHVTAGNSKQA 631



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 215/419 (51%), Gaps = 1/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L   G P  AQ  +  ++    + +  T   ++ +      F+   +++S++E+  
Sbjct: 128 LLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRC 187

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD +  N +I+A   +G+++ A+     M   GL P   TYN+++KG     + +++ 
Sbjct: 188 VFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAK 247

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++   M  + +V P++R++N+L+  +C    + EA     +M    + PDVV+++ +   
Sbjct: 248 EVFRTMD-QCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGL 306

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           +++ GE D A   + EM+  G+ P+G    ++I G+C+ G + EALR    M  +G  P+
Sbjct: 307 FSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPD 366

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N L+ G  +       +++L  M+E  V PD+ T++T+++ +   G  +   ++FD
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFD 426

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            + +  ++PD   Y+ L  G  R+ +  KA EL   M      PN + ++ +I   C  G
Sbjct: 427 TLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKG 486

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            ++ A    D+M + G  PN++T+ +++ GY  +    + ++ LQ M+   V P   TF
Sbjct: 487 QVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITF 545



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 179/351 (50%), Gaps = 1/351 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + L+     RG+   A A    +   G  P  V YT ++         +    +  
Sbjct: 297 VVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRD 356

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  PD + +N ++N   +   + +A     +M+E G+TP   T+ TLI GY   G
Sbjct: 357 EMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQG 416

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E +++L D + R+  ++P++ TYN L+   C + ++ +A  +   M A  + P+ +TY
Sbjct: 417 NFENALQLFDTLLRQ-RLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITY 475

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  ++ + G+ + A   + EM   G  PN RT   II GYC+ G +K+  +F + M++
Sbjct: 476 SILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQ 535

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             V P+L+ FN LI G+++  +  G   V  +M++  V PD +TY+ I+N +S  G M  
Sbjct: 536 DNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQD 595

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              +F  MG +GI+PD + Y  L  G+V     ++A +L   MI  GF P+
Sbjct: 596 AGRVFKGMGDSGIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPD 646



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 197/388 (50%), Gaps = 1/388 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           VRS   L+      G+ +EA   +  +      P +V+++ L+   + +   +   + + 
Sbjct: 262 VRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLR 321

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++  G+ PD + +  VI  F  +G+M EA+    +M   G  P   TYNTL+ G     
Sbjct: 322 EMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQH 381

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  ++ KLL+ M   G V P+L T+  L+  +C + N   A  +   +    ++PDVVTY
Sbjct: 382 RLLDAEKLLNEMEERG-VTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTY 440

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++     + G+  +A E+  +M    + PN  T  I+I  +C++G++++A  F   M +
Sbjct: 441 NSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVK 500

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PN+  +N +IKG+    +     + L  M++  V PD+IT++T+++ +     M  
Sbjct: 501 KGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHG 560

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F+ M K  ++PDA  Y+++  G+  +   + A  +   M +SG  P+   + ++I+
Sbjct: 561 AFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMSLIN 620

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           G  + G+  +A ++ D+M   G +P+ K
Sbjct: 621 GHVTAGNSKQAFQLHDEMIHRGFAPDDK 648



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 205/437 (46%), Gaps = 34/437 (7%)

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
           ++R  S   I+S +  +   P    F+ +I  +++S    EA + F  + +  +    S 
Sbjct: 65  RRRGASRREIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHRVPVPASA 124

Query: 180 YNTLIKGYGIAGKP---EESVKLLDLMSREGN---------------------------- 208
            N L+     AG P   +E+ +L+     E N                            
Sbjct: 125 SNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEME 184

Query: 209 ---VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
              V P++ T+NVL+ A     ++  A  ++  MA  G+KP +VTYN++     ++   D
Sbjct: 185 KRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFD 244

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A+EV   M+   V P+ R+  I+I G+C+ G++KEA++F + M+   V P++V F+ LI
Sbjct: 245 KAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLI 304

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
             F    + D     L  MK   + PD + Y+ ++  +  AG M +   + D+M   G  
Sbjct: 305 GLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCL 364

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   Y+ L  G  ++     AE+LL  M E G  P++  FTT+I G+C  G+ + A+++
Sbjct: 365 PDVVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQL 424

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           FD +    + P++ T+ +L+ G        +A E+   M A  + P   T+ +L ++   
Sbjct: 425 FDTLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCE 484

Query: 506 TGLTKEAKRILSKIKNK 522
            G  ++A   L ++  K
Sbjct: 485 KGQVEDAFGFLDEMVKK 501



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 207/443 (46%), Gaps = 1/443 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +  +  KP+EA   F  L++            LLA L+     +        V  + 
Sbjct: 93  LIRTYTQSRKPREAFEAFRLLLDHRVPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSD 152

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            + ++   N +++++ ++   + A     +M++  + P   T+N LI     AG  + ++
Sbjct: 153 SEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAI 212

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L+D M+  G +KP + TYN +++  C  +   +A  V   M    + PDV ++N +   
Sbjct: 213 ALVDSMANRG-LKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGG 271

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + GE  +A +   EM+H  V P+  +   +I  + + G++  A  + R MK  G+ P+
Sbjct: 272 FCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPD 331

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            VI+ ++I GF           V   M  F   PDV+TY+T++N       +   +++ +
Sbjct: 332 GVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLN 391

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M + G+ PD   ++ L  GY R+   E A +L  T++     P+VV + ++I G C  G
Sbjct: 392 EMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKG 451

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            + +A E++D M    + PN  T+  L+  + E  Q   A   L  M   G  P   T+ 
Sbjct: 452 DLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYN 511

Query: 498 LLAEARRATGLTKEAKRILSKIK 520
            + +    +G  K+ ++ L K++
Sbjct: 512 SIIKGYCRSGNVKKGQQFLQKMR 534


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 198/376 (52%), Gaps = 2/376 (0%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESG-NMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
           SI+   + +G  P  + +NAV++A   S  N+  A + F +M ES ++P   TYN LI+G
Sbjct: 155 SIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYNILIRG 214

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
           +  AG  + ++ L D M  +G + PN+ TYN L+  +C  + I + + ++  MA  G++P
Sbjct: 215 FCFAGNIDVALTLFDKMETKGCL-PNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEP 273

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           ++++YN +     + G   +   V+ EM   G   +  T   +I GYCKEG   +AL   
Sbjct: 274 NLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMH 333

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             M  +G+ P+++ +  LI    +  + +   E L  M+   + P+  TY+T+++ +S  
Sbjct: 334 AEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQK 393

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G+M++   +  +M   G  P    Y+ L  G+    + E A  +L  M E G  P+VV +
Sbjct: 394 GYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSY 453

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           +T++SG+C    +D A+ V  +M E G+ P+  T+ +L+ G+ E R+   A ++ + M  
Sbjct: 454 STVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLR 513

Query: 487 FGVHPQKSTFLLLAEA 502
            G+ P + T+  L  A
Sbjct: 514 VGLPPDEFTYTALINA 529



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 232/448 (51%), Gaps = 46/448 (10%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI-HSI 129
            V+S ++L  SLI++     A +I +     G  P +++Y  +L A    KR  S   ++
Sbjct: 140 VVKSYSRL--SLIDK-----ALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENV 192

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ E+ + P+   +N +I  F  +GN++ A+  F KM+  G  P   TYNTLI GY  
Sbjct: 193 FKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCK 252

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNV------------------------------- 218
             K ++  KLL  M+ +G ++PNL +YNV                               
Sbjct: 253 LRKIDDGFKLLRSMALKG-LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311

Query: 219 ----LVRAWCNEKNITEAWNVMH-KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
               L++ +C E N  +A  VMH +M   G+ P V+TY ++  +  + G  ++A E + +
Sbjct: 312 TYNTLIKGYCKEGNFHQAL-VMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQ 370

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M   G+ PN RT   ++ G+ ++G + EA R  R M + G  P++V +N LI G      
Sbjct: 371 MRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGK 430

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            +    VL  MKE  ++PDV++YST+++ +  +  +D+   +  +M + GIKPD   YS 
Sbjct: 431 MEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSS 490

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L +G+  ++  ++A +L   M+  G  P+   +T +I+ +C +G +++A+++ ++M E G
Sbjct: 491 LIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKG 550

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEIL 481
           V P++ T+  L+ G ++  +   A+ +L
Sbjct: 551 VLPDVVTYSVLINGLNKQSRTREAKRLL 578



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 190/380 (50%), Gaps = 1/380 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G    A  +F+ +   G  P++VTY TL+      ++ +    ++  +   G++P+ I +
Sbjct: 219 GNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISY 278

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N VIN     G M+E      +M   G +    TYNTLIKGY   G   +++ +   M R
Sbjct: 279 NVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLR 338

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G + P++ TY  L+ + C   N+  A   + +M   G+ P+  TY T+   ++Q G  +
Sbjct: 339 HG-LTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMN 397

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  V+ EM  NG  P+  T   +I+G+C  GK+++A+     MKE G+ P++V ++ ++
Sbjct: 398 EAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVL 457

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF    D D    V   M E  + PD ITYS+++  +       +  +++++M + G+ 
Sbjct: 458 SGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP 517

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   Y+ L   Y  E + EKA +L   M+E G  P+VV ++ +I+G         A  +
Sbjct: 518 PDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRL 577

Query: 446 FDKMCEHGVSPNLKTFETLM 465
             K+      P+  T+ TL+
Sbjct: 578 LLKLFYEESVPSDVTYHTLI 597



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 190/378 (50%), Gaps = 16/378 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+    + G   +A  +   ++  G  PS++TYT+L+ ++      N     + Q+   G
Sbjct: 316 LIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRG 375

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +  +++ FS+ G M EA     +M ++G +P+  TYN LI G+ + GK E+++
Sbjct: 376 LCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAI 435

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L+ M  +G + P++ +Y+ ++  +C   ++ EA  V  +M   G+KPD +TY+++   
Sbjct: 436 AVLEDMKEKG-LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQG 494

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + +     +A ++  EM   G+ P+  T   +I+ YC EG +++AL+    M E GV P+
Sbjct: 495 FCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPD 554

Query: 318 LVIFNLLIKGF-VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN--------------A 362
           +V +++LI G   +   R+    +L L  E  V  DV  ++ I N               
Sbjct: 555 VVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKG 614

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +   G M +  ++F+ M     KPD  AY+I+  G+ R  +  KA  L   M++SGF  +
Sbjct: 615 FCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLH 674

Query: 423 VVIFTTIISGWCSDGSMD 440
            V    ++     +G ++
Sbjct: 675 TVTVIALVKALHKEGKVN 692



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/489 (23%), Positives = 216/489 (44%), Gaps = 56/489 (11%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++N L   G+ +E   +   +   G+    VTY TL+     +  F+    + +++
Sbjct: 277 SYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEM 336

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G+ P  I + ++I++  ++GNM  AM+   +M+  GL P   TY TL+ G+   G  
Sbjct: 337 LRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYM 396

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+ ++L  M+  G   P++ TYN L+   C    + +A  V+  M   G+ PDVV+Y+T
Sbjct: 397 NEAYRVLREMNDNG-FSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYST 455

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           + + + ++ + D+A  V  EM   G++P+  T   +I G+C++ + KEA      M   G
Sbjct: 456 VLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVG 515

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P                                  PD  TY+ ++NA+   G ++K  
Sbjct: 516 L-P----------------------------------PDEFTYTALINAYCMEGDLEKAL 540

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT----- 428
           ++ ++M + G+ PD   YS+L  G  ++    +A+ LL+ +      P+ V + T     
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600

Query: 429 ----------IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
                     +I G+C  G M  A +VF+ M      P+   +  ++ G+  A    +A 
Sbjct: 601 SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAY 660

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVES 538
            + + M   G      T + L +A    G   E   ++  +    R+ E+   E   V  
Sbjct: 661 TLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVL---RSCELSEAEQAKV-- 715

Query: 539 LERLYHKEA 547
           L  + H+E 
Sbjct: 716 LVEINHREG 724



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 106/373 (28%), Positives = 180/373 (48%), Gaps = 37/373 (9%)

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK-NITEAWN 234
           T+S ++ ++K Y      ++++ ++ L    G   P + +YN ++ A    K NI+ A N
Sbjct: 133 TSSVFDLVVKSYSRLSLIDKALSIVHLAQAHG-FMPGVLSYNAVLDATIRSKRNISFAEN 191

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           V  +M  S + P+V TYN +   +   G  D A  +  +ME  G  PN  T   +I GYC
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV------EI------MDRDG--VDEV 340
           K  KI +  +  R+M   G+ PNL+ +N++I G        E+      M+R G  +DEV
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311

Query: 341 L---------------------ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
                                 A M    + P VITY++++++   AG M++  E  D M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G+ P+   Y+ L  G+ ++    +A  +L  M ++GF P+VV +  +I+G C  G M
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKM 431

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           + AI V + M E G+SP++ ++ T++ G+  +     A  + + M   G+ P   T+  L
Sbjct: 432 EDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSL 491

Query: 500 AEARRATGLTKEA 512
            +       TKEA
Sbjct: 492 IQGFCEQRRTKEA 504



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 89/389 (22%), Positives = 178/389 (45%), Gaps = 21/389 (5%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C   R+ T L++   ++G   EA  +   + + G  PS+VTY  L+    +  +     +
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++  ++E G+ PD + ++ V++ F  S +++EA+    +M E G+ P T TY++LI+G+ 
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFC 496

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
              + +E+  L + M R G + P+  TY  L+ A+C E ++ +A  + ++M   G+ PDV
Sbjct: 497 EQRRTKEACDLYEEMLRVG-LPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDV 555

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTY+ +     +     +A+ +++++ +    P+  T   +I   C   + K  +     
Sbjct: 556 VTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN-CSNIEFKSVVS---- 610

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
                          LIKGF         D+V   M      PD   Y+ +++    AG 
Sbjct: 611 ---------------LIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGD 655

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           + K   ++ +M K+G          L K   +E +  +   +++ ++ S           
Sbjct: 656 IRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKV 715

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           ++     +G+MD  ++V  +M + G  PN
Sbjct: 716 LVEINHREGNMDVVLDVLAEMAKDGFLPN 744


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 215/432 (49%), Gaps = 39/432 (9%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T LM +L    +  +A  +  ++ + G +P +VTY TL+  L      ++   +++++
Sbjct: 96  SYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEM 155

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E+G++P+ + ++ +++ + ++G  E     F +M   G+ P    Y  LI      GK 
Sbjct: 156 CESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKV 215

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +++ +++D+M+  G ++PN+ TYNVL+ + C E ++ EA ++   M+  G++PDVVTYNT
Sbjct: 216 KKAARVMDMMTERG-LEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNT 274

Query: 254 IATAYAQNGEADQAEEVIVEMEH--NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + T  +   E D+A  ++ EM      V+P+  T   +I G CK G +++AL+    M E
Sbjct: 275 LITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAE 334

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN---------- 361
            G   NLV FNLLI G + +       E++  M    + PD  TYS ++N          
Sbjct: 335 NGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVER 394

Query: 362 -------------------------AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
                                    A    G M + +++F++M +   K DA AYS +  
Sbjct: 395 AESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEMDR-NCKLDAAAYSTMIH 453

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  +  E + AEE L  MI+ G  P+ V ++  I+ +   G +  A  V  +M   G  P
Sbjct: 454 GAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVP 513

Query: 457 NLKTFETLMWGY 468
           ++  F++L+ GY
Sbjct: 514 DVAVFDSLIQGY 525



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/494 (26%), Positives = 235/494 (47%), Gaps = 62/494 (12%)

Query: 82  LIERGKPQEAQAIFNN---LIEGGHKPSL----------VTYTTLLAALTIQKRFNS--- 125
           L+ RG+  EA A  N    L+     P+L          V+Y T+LAAL  Q   ++   
Sbjct: 19  LLRRGR-GEAAARLNRHLRLLPLPESPALLSALPSVRDAVSYNTVLAALCRQGCLDAALF 77

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
           +  +MS        P++I +  ++ A        +A+     M++ G+ P   TY TLI+
Sbjct: 78  LLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIR 137

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G   A   + +V+LL+ M   G ++PN+  Y+ L+  +C          V  +M+  G++
Sbjct: 138 GLCDAADVDTAVELLNEMCESG-IEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIE 196

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PDVV Y  +  +  ++G+  +A  V+  M   G++PN  T  ++I+  CKEG ++EAL  
Sbjct: 197 PDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDL 256

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF-----RVNPDVITYSTIM 360
            + M E GV P++V +N LI G   +++   +DE +AL++E      RV PD++T+++++
Sbjct: 257 RKNMSEKGVQPDVVTYNTLITGLSSVLE---MDEAMALLEEMMQGETRVRPDLMTFNSVI 313

Query: 361 NAWSTAGFM-----------------------------------DKCKEIFDDMGKAGIK 385
           +     G+M                                    K  E+ D+M  +G++
Sbjct: 314 HGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQ 373

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD+  YSIL  G+ + ++ E+AE  L  M   G  P  V +  ++   C  G M +A ++
Sbjct: 374 PDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDL 433

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F++M +     +   + T++ G  ++ +   AEE L+ M   G+ P   T+ +       
Sbjct: 434 FNEM-DRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAK 492

Query: 506 TGLTKEAKRILSKI 519
           +G    A+R+L ++
Sbjct: 493 SGDLAAAERVLKQM 506



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/413 (26%), Positives = 208/413 (50%), Gaps = 9/413 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   + G+ +    +F  +   G +P +V YT L+ +L    +      +M  + E G
Sbjct: 170 LLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERG 229

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++P+ + +N +IN+  + G++ EA+D    M E G+ P   TYNTLI G     + +E++
Sbjct: 230 LEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAM 289

Query: 198 KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            LL ++M  E  V+P+L T+N ++   C    + +A  V   MA +G + ++V +N +  
Sbjct: 290 ALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIG 349

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              +  +  +A E++ EM  +G+QP+  T  I+I+G+CK  +++ A  +   M+  G+ P
Sbjct: 350 GLLRVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEP 409

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP--DVITYSTIMNAWSTAGFMDKCKE 374
             V +  L+K      D+  + +   L  E   N   D   YST+++    +G     +E
Sbjct: 410 EPVHYIPLLKAMC---DQGMMGQARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEE 466

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
              DM   G+ PDA  YSI    + +  +   AE +L  M  SGF P+V +F ++I G+ 
Sbjct: 467 FLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYG 526

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           + G  ++ +E+  +M    V+ + K   T++     + +    +++LQ +  F
Sbjct: 527 AKGDTEKILELTREMTAKDVALDPKIISTIVTSLGASIE---GQKLLQSLPGF 576


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 216/472 (45%), Gaps = 35/472 (7%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           + KL+N     GK  E+     +++  G KP +V  T L+      +       +M  +E
Sbjct: 65  LMKLLNRSCRAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILE 124

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G DPD   +NA+I+ FS++  ++ A   F +M+  G +P   TYN +I      GK E
Sbjct: 125 TYG-DPDVYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLE 183

Query: 195 ESVKLLDLMSREG----------------------------------NVKPNLRTYNVLV 220
            + +++D + ++G                                   ++P+L TYN ++
Sbjct: 184 LAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAII 243

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           R  C E     A + +  ++A G  PDVV+YN +  ++      +  E ++ +M  +G +
Sbjct: 244 RGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCE 303

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           PN  T  I+IS +C+EG+++EA+     MKE G+ P+   ++ LI  F +    D   E 
Sbjct: 304 PNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEY 363

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L  M      PD++ Y+TI+      G  D   ++F+ + + G  P   AY+ +      
Sbjct: 364 LEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWS 423

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
                KA E++  MI  G  P+ + + ++IS  C DG +D AI +   M      P + +
Sbjct: 424 CGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVIS 483

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           F  ++ G  +A + +   E+L  M   G  P +++++LL E     G   EA
Sbjct: 484 FNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEA 535



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 199/391 (50%), Gaps = 8/391 (2%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
            +  V   G  PD +    +I  F  S N+++AM     ++  G  P   +YN +I G+ 
Sbjct: 84  FLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISGFS 142

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            A + + + ++ D M   G   P++ TYN+++ + C+   +  A+ VM ++   G KP V
Sbjct: 143 KANQIDSANQVFDRMRSRG-FSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSV 201

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           +TY  +  A    G  ++A E+  E+   G++P+  T   II G CKEG    AL F R 
Sbjct: 202 ITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRH 261

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWST 365
           +   G +P++V +N+L++ F   +++   ++   LMK+  ++   P+V+T+S +++++  
Sbjct: 262 LSARGCNPDVVSYNILLRSF---LNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCR 318

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G + +   + + M + G+ PD+++Y  L   + +E   + A E L  M+  G  P++V 
Sbjct: 319 EGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVN 378

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           + TI++  C  G  D A++VF+K+ E G  P ++ + T+           +A E++  M 
Sbjct: 379 YNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALEMISEMI 438

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
             G+ P + T+  L       GL  EA  +L
Sbjct: 439 RKGIDPDEITYNSLISCLCRDGLVDEAIGLL 469



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 200/407 (49%), Gaps = 3/407 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   +++   +  +   A  +F+ +   G  P +VTY  ++ +L  + +      +M 
Sbjct: 131 VYSYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMD 190

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ ++G  P  I +  +I A    G + EA++ F ++   GL P   TYN +I+G    G
Sbjct: 191 ELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEG 250

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + ++  +  +S  G   P++ +YN+L+R++ N+    +   +M  M  SG +P+VVT+
Sbjct: 251 MEDRALDFVRHLSARG-CNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTH 309

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + + +++ + G   +A  V+  M+  G+ P+  +   +IS +CKEG++  A+ +   M  
Sbjct: 310 SILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVS 369

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P++V +N ++    +    D   +V   + E    P V  Y+T+ +A  + G   K
Sbjct: 370 DGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIK 429

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+  +M + GI PD   Y+ L     R+   ++A  LL+ M  + F P V+ F  ++ 
Sbjct: 430 ALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLL 489

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
           G C    +   IE+   M E G  PN  ++  L+ G + A   WRAE
Sbjct: 490 GMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYA--GWRAE 534



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/377 (26%), Positives = 186/377 (49%), Gaps = 1/377 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ SL  RGK + A  + + L++ G KPS++TYT L+ A  ++ R N    +  ++   G
Sbjct: 172 MIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELFDELVSRG 231

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +NA+I    + G  + A+D    +   G  P   +YN L++ +    + E+  
Sbjct: 232 LRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGE 291

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+  M   G  +PN+ T+++L+ ++C E  + EA NV+  M   G+ PD  +Y+ + +A
Sbjct: 292 RLMKDMVLSG-CEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISA 350

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G  D A E + +M  +G  P+      I++  CK G    AL     + E G  P 
Sbjct: 351 FCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPT 410

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  +N +        ++    E+++ M    ++PD ITY+++++     G +D+   +  
Sbjct: 411 VRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLV 470

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM     +P   +++I+  G  +     +  ELL+TM+E G  PN   +  +I G    G
Sbjct: 471 DMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAG 530

Query: 438 SMDRAIEVFDKMCEHGV 454
               A+E+ + +   GV
Sbjct: 531 WRAEAMELANSLYRLGV 547



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 143/308 (46%), Gaps = 17/308 (5%)

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G +P+   C  +I G+     +K+A+R    ++ YG  P++  +N +I GF +    D  
Sbjct: 92  GFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYG-DPDVYSYNAMISGFSKANQIDSA 150

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           ++V   M+    +PDV+TY+ ++ +  + G ++   E+ D++ K G KP    Y+IL + 
Sbjct: 151 NQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEA 210

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
            + E    +A EL   ++  G  P++  +  II G C +G  DRA++    +   G +P+
Sbjct: 211 TILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPD 270

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + ++  L+  +    +    E +++ M   G  P   T  +L  +    G  +EA  +L 
Sbjct: 271 VVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLE 330

Query: 518 KIKNKERTNE------------MEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSD 565
            +K K  T +             E   D+ +E LE++     +    P+++    ++++ 
Sbjct: 331 VMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKM----VSDGCLPDIVNYNTILATL 386

Query: 566 QKGSAAAL 573
            K   A L
Sbjct: 387 CKFGCADL 394


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 208/425 (48%), Gaps = 6/425 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L +  +  +A   F  +   G     V YT LL+ L  +KR +   +I+ ++ ++G
Sbjct: 50  LIDGLCKAKRSIDALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHG 109

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            +P+ + +N++I+   ++   + A + F  MK    +P+  TYNTL+ G    GK E ++
Sbjct: 110 CEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAM 169

Query: 198 KLL-DLMSR-----EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
            L  +++ R     +    PN+ TY+VL+   C    +++A  ++  M A G  PDV+TY
Sbjct: 170 ALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITY 229

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     +  +   A EV+ EM   G  PN  T   ++ G C+  ++ +AL   R M  
Sbjct: 230 TILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTC 289

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PN+V +  LI G  ++        +LA M +    PD++ Y+ ++N    A  +D+
Sbjct: 290 RGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDE 349

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +       GIKPD   YS +  G  R    ++A  LL+ +   G  P+V++++T+I 
Sbjct: 350 SIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLID 409

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G +D A ++++ M   G   ++ T+ TL+ G  +A +   A  +L  M   G  P
Sbjct: 410 GLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPP 469

Query: 492 QKSTF 496
              T+
Sbjct: 470 STMTY 474



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 212/434 (48%), Gaps = 14/434 (3%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++ L +  +  +A AI + + + G +P++VTY +L+  L      +    +   ++ 
Sbjct: 83  TALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKS 142

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM-------KESGLTPTTSTYNTLIKGYG 188
               P  + +N +++    +G +E AM  F +M        +   +P   TY+ LI G  
Sbjct: 143 VECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLC 202

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            A +  ++V+LL+ M   G   P++ TY +LV   C E  +  AW V+ +M  +G  P++
Sbjct: 203 KANRVSQAVELLESMKARG-CSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNL 261

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTYN++     +      A  ++ +M   G  PN  T G +I G CK G++K+A      
Sbjct: 262 VTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLAD 321

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWST 365
           M + G  P+L+I+N+LI G  +    D VDE +AL++      + PDV+TYS+++     
Sbjct: 322 MIDKGGTPDLMIYNMLINGLCK---ADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCR 378

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
           +  +D+   +   +   G  PD   YS L  G  +  + ++A +L   M   G   +VV 
Sbjct: 379 SNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVT 438

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           ++T+I G C  G +D A  +  +M   G  P+  T+ +L+ G  +      A E+++ M+
Sbjct: 439 YSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEME 498

Query: 486 AFGVHPQKSTFLLL 499
                P   T+ +L
Sbjct: 499 RSNCAPSAVTYNIL 512



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/416 (23%), Positives = 202/416 (48%), Gaps = 8/416 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M+      V + + L++ L +  +  +A  +  ++   G  P ++TYT L+  L  + + 
Sbjct: 183 MDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKV 242

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            +   ++ ++ + G  P+ + +N++++    +  + +A+     M   G TP   TY TL
Sbjct: 243 AAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTL 302

Query: 184 IKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           I G    G+ +++  +L D++ + G   P+L  YN+L+   C    + E+  ++ +  + 
Sbjct: 303 IDGLCKVGRVKDACAMLADMIDKGGT--PDLMIYNMLINGLCKADQVDESIALLRRAVSG 360

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+KPDVVTY+++     ++   D+A  +++ ++  G  P+      +I G CK GK+ EA
Sbjct: 361 GIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEA 420

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M   G   ++V ++ LI G  +    D    +LA M      P  +TY++++  
Sbjct: 421 FDLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKG 480

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL-----MTMIES 417
                 +D+  E+ ++M ++   P A  Y+IL  G  R +  + A  LL       +   
Sbjct: 481 LCDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAG 540

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           G   + + ++++I G C  G +  A++ F +M ++GV P+  T+  L+ G  +++ 
Sbjct: 541 GTALDTIAYSSLIDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKD 596



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 180/390 (46%), Gaps = 8/390 (2%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD   + A++  F   G +++A   F +M+   L P     + LI G   A +  ++++ 
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
              M   G V   +  Y  L+     EK + +A  ++H+M   G +P+VVTYN++     
Sbjct: 67  FRAMQGSGIVADTV-IYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH---- 315
           +N E D+A+E+   M+     P+  T   ++ G  + GK++ A+   + M +   H    
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 316 ---PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
              PN++ +++LI G  +        E+L  MK    +PDVITY+ +++       +   
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            E+  +M  AG  P+   Y+ L  G  R +    A  L+  M   G  PNVV + T+I G
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G +  A  +   M + G +P+L  +  L+ G  +A Q   +  +L+   + G+ P 
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPD 365

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             T+  +      +    EA R+L  +K++
Sbjct: 366 VVTYSSVIYGLCRSNRLDEACRLLLYVKSR 395



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 171/352 (48%), Gaps = 13/352 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L    +  +A A+  ++   G  P++VTY TL+  L    R     ++++ + + G
Sbjct: 267 LLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKG 326

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + +N +IN   ++  ++E++    +    G+ P   TY+++I G   + + +E+ 
Sbjct: 327 GTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEAC 386

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL L  +     P++  Y+ L+   C    + EA+++   MA  G   DVVTY+T+   
Sbjct: 387 RLL-LYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDG 445

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G  D+A  ++  M   G  P+  T   +I G C    + EA+     M+     P+
Sbjct: 446 LCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPS 505

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP--------DVITYSTIMNAWSTAGFM 369
            V +N+LI G    M+R  VD  + L+++ +           D I YS++++    AG +
Sbjct: 506 AVTYNILIHGMCR-MER--VDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRV 562

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT-MIESGFH 420
            +  + F +M   G+ PD   YSIL +G  + ++  +   L++  M++ G+ 
Sbjct: 563 AEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLGYR 614



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/326 (24%), Positives = 154/326 (47%), Gaps = 7/326 (2%)

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +P++ TY  L+R +C    I +A     +M +  + P+V   + +     +   +  A  
Sbjct: 6   QPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALR 65

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
               M+ +G+  +      ++SG  KE ++ +AL     M+++G  PN+V +N LI G  
Sbjct: 66  CFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLC 125

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM-------GKA 382
           +  + D   E+   MK    +P ++TY+T+++     G +++   +F +M          
Sbjct: 126 KNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDD 185

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
              P+   YS+L  G  +     +A ELL +M   G  P+V+ +T ++ G C +  +  A
Sbjct: 186 RCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAA 245

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            EV  +M + G  PNL T+ +L+ G   AR+   A  +++ M   G  P   T+  L + 
Sbjct: 246 WEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDG 305

Query: 503 RRATGLTKEAKRILSKIKNKERTNEM 528
               G  K+A  +L+ + +K  T ++
Sbjct: 306 LCKVGRVKDACAMLADMIDKGGTPDL 331



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 93/179 (51%), Gaps = 1/179 (0%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           PDV TY+ ++  +   G +D+ +  FD+M    + P+    SIL  G  + +    A   
Sbjct: 7   PDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSIDALRC 66

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
              M  SG   + VI+T ++SG   +  +D+A+ +  +M +HG  PN+ T+ +L+ G  +
Sbjct: 67  FRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLIDGLCK 126

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEME 529
             +P RA+E+ + MK+    P   T+  L +    TG  + A  +  ++ ++ R+++M+
Sbjct: 127 NNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDR-RSHDMD 184


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 224/489 (45%), Gaps = 38/489 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   ++N L ++G+ QEA+ I +++      P+  TYT+L+         +   ++ 
Sbjct: 201 SLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMF 260

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ ++G DP+S+ ++ +IN     G +EEAMD   +M + G+ PT  TY   +     A
Sbjct: 261 DRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDA 320

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E+V+LL  M + G V PN++T+  L+     +     A  + HKM A G+ P  VT
Sbjct: 321 GCSSEAVELLGKMKKRGCV-PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVT 379

Query: 251 YNT-----------------------------------IATAYAQNGEADQAEEVIVEME 275
           YN                                    I   +   G+  +A  +  +M 
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKML 439

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
             G  PN  T   +I GYCK+G +  A+R    MK  G+ P+   +  LI GF      +
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLE 499

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
               +   M E  ++P+ +TY+ I++ +     +D    +F  M ++G  P +  Y+++ 
Sbjct: 500 HATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMI 559

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G+ +     +AE     M++ G  PNV+ +T+ I G C +G    A ++F +M +    
Sbjct: 560 SGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYF 619

Query: 456 PNLKTFETLMWGYSEARQPWRAE--EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           PNL T+ +L++G  +  +   AE   +L  +  +G  P   T+  L +     G   EA 
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679

Query: 514 RILSKIKNK 522
           +++  ++ K
Sbjct: 680 QLVVSMQKK 688



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 225/452 (49%), Gaps = 1/452 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ S T L+  L +      A+ ++  ++  G +PSL+T+ T++  L  + R      IM
Sbjct: 166 TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIM 225

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S +      P++  + ++I     + N++ A   F +M + G  P + TY+TLI G    
Sbjct: 226 SHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ EE++ +L+ M ++G ++P + TY + + + C+    +EA  ++ KM   G  P++ T
Sbjct: 286 GRLEEAMDMLEEMVQKG-IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT 344

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +  + +  +++G+ + A  +  +M  +G+ P   T   +I+  C EG+ + A    + M 
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWML 404

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            +G  P+   +N +IK F  + D      +   M +   +P+VITY+T++  +   G ++
Sbjct: 405 SHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLN 464

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               + + M   G+KPDA  Y+ L  G+ R  + E A  L   M+E G  PN V +T II
Sbjct: 465 NAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+ +   +D A+ +F KM E G  P+ +T+  ++ G+S+      AE     M   G+ 
Sbjct: 525 DGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLL 584

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+    +     G T  A +I  +++ +
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 212/426 (49%), Gaps = 8/426 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C   +++ T L++ L   GK + A  +++ ++  G  P+ VTY  L+  L ++ R
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F +  +I   +  +G  P +  +N +I  F   G++++AM  F KM ++G +P   TYNT
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY   G    +++LL++M   G +KP+  TY  L+  +     +  A ++ + M   
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNG-LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEH 511

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P+ VTY  I   Y    + D A  +  +M  +G  P+ +T  ++ISG+ K   I EA
Sbjct: 512 GISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA 571

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEFRVNPDVITYSTIMN 361
             F   M + G+ PN++ +   I G      R G+  ++   M++    P++ TYS+++ 
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCR-NGRTGLAFKIFHEMEKRNYFPNLYTYSSLIY 630

Query: 362 AWSTAGFMDKCKEIFDDMGKA---GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
                G  +   E+++ + +    G +P+   Y+ L KG   E    +A++L+++M + G
Sbjct: 631 GLCQEGRAED-AEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKG 689

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P+  I+  ++ G C +  ++ A+ +F  M   G   +L  ++ L+    +      A+
Sbjct: 690 LQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQ 749

Query: 479 EILQIM 484
            I Q M
Sbjct: 750 CIFQTM 755



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 185/382 (48%), Gaps = 5/382 (1%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G  Q+A  IF+ +++ G  P+++TY TL+     Q   N+   ++  ++ NG+ PD+  +
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             +I+ FS  G +E A   F+ M E G++P   TY  +I GY    K ++++ L   M  
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            GN+ P+ +TYNV++  +    +I+EA N   KM   G+ P+V+TY +      +NG   
Sbjct: 546 SGNL-PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTG 604

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF---ARTMKEYGVHPNLVIFN 322
            A ++  EME     PN  T   +I G C+EG+ ++A  +   AR +  YG  PN+  + 
Sbjct: 605 LAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLAR-LTHYGCEPNVDTYT 663

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            L+KG          D+++  M++  + P    Y  ++        ++    IF  M   
Sbjct: 664 TLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTL 723

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G +     Y  L     +E   E+A+ +  TM+E  ++ + V +T ++ G   +G  D  
Sbjct: 724 GFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVLLDGLLKEGETDLC 783

Query: 443 IEVFDKMCEHGVSPNLKTFETL 464
           +++   M     + N +T+  L
Sbjct: 784 LKLLHVMESRNCTLNFQTYVML 805



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 140/309 (45%), Gaps = 3/309 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T +++      K  +A A+F  ++E G+ PS  TY  +++  +     +   +   ++
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKM 578

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            + G+ P+ I + + I+    +G    A   F +M++    P   TY++LI G    G+ 
Sbjct: 579 VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638

Query: 194 EESVKLLDLMSR--EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           E++ ++ +L++R      +PN+ TY  LV+  C E    EA  ++  M   G++P    Y
Sbjct: 639 EDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIY 697

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     +N + + A  +   M+  G Q +      +I   CKE  I+EA    +TM E
Sbjct: 698 RALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLE 757

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
              + + V + +L+ G ++  + D   ++L +M+      +  TY  +    S      K
Sbjct: 758 KHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIK 817

Query: 372 CKEIFDDMG 380
             +I   +G
Sbjct: 818 IPQISQQLG 826



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 3/216 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS--IHSI 129
           V + T  ++ L   G+   A  IF+ + +  + P+L TY++L+  L  + R     ++++
Sbjct: 587 VITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNL 646

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           ++++   G +P+   +  ++      G   EA      M++ GL P+   Y  L+ G   
Sbjct: 647 LARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECK 706

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
             K E ++ +   M   G  + +L  Y  L+ A C E  I EA  +   M       D V
Sbjct: 707 NLKVESALNIFYSMDTLG-FQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEV 765

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
            +  +     + GE D   +++  ME      N +T
Sbjct: 766 AWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQT 801


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 215/438 (49%), Gaps = 4/438 (0%)

Query: 76  TKLMNSLIE-RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           TKL+      R  P+  + +   ++E   +P +  Y  L+       R +    ++ ++ 
Sbjct: 128 TKLIKGFFTLRNIPKAVRVM--EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMR 185

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
                PD++ +N +I +    G ++ A+    ++      PT  TY  LI+   + G  +
Sbjct: 186 SKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVD 245

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           E++KL+D M   G +KP++ TYN ++R  C E  +  A+ ++  +   G +PDV++YN +
Sbjct: 246 EALKLMDEMLSRG-LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNIL 304

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             A    G+ ++ E+++ +M      PN  T  I+I+  C++GKI+EA+   + MKE G+
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P+   ++ LI  F      D   E L  M      PD++ Y+T++      G  D+  E
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           IF  +G+ G  P++ +Y+ +        +  +A  +++ M+ +G  P+ + + ++IS  C
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +G +D A E+   M      P++ T+  ++ G+ +A +   A  +L+ M   G  P ++
Sbjct: 485 REGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNET 544

Query: 495 TFLLLAEARRATGLTKEA 512
           T+ +L E     G   EA
Sbjct: 545 TYTVLIEGIGFAGYRAEA 562



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 206/399 (51%), Gaps = 3/399 (0%)

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           S+H + + V + G +PD I    +I  F    N+ +A+     +++ G  P    YN LI
Sbjct: 108 SLHLLETMVRK-GYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G+    + +++ ++LD M R  +  P+  TYN+++ + C+   +  A  V++++ +   
Sbjct: 166 NGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           +P V+TY  +  A    G  D+A +++ EM   G++P+  T   II G CKEG +  A  
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
             R ++  G  P+++ +N+L++  +     +  ++++  M   + +P+V+TYS ++    
Sbjct: 285 MVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G +++   +   M + G+ PDA++Y  L   + RE   + A E L TMI  G  P++V
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            + T+++  C +G  D+A+E+F K+ E G SPN  ++ T+      +    RA  ++  M
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            + G+ P + T+  +       G+  EA  +L  +++ E
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 182/393 (46%), Gaps = 7/393 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ SL  RGK   A  + N L+    +P+++TYT L+ A  ++   +    +M ++   G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N +I    + G ++ A +    ++  G  P   +YN L++     GK EE  
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGE 318

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL+  M  E    PN+ TY++L+   C +  I EA N++  M   G+ PD  +Y+ +  A
Sbjct: 319 KLMTKMFSE-KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G  D A E +  M  +G  P+      +++  CK GK  +AL     + E G  PN
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +N +        D+     ++  M    ++PD ITY+++++     G +D+  E+  
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM      P    Y+I+  G+ +    E A  +L +M+ +G  PN   +T +I G    G
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557

Query: 438 SMDRAIEV------FDKMCEHGVSPNLKTFETL 464
               A+E+       D + E+      +TF  L
Sbjct: 558 YRAEAMELANDLVRIDAISEYSFKRLHRTFPLL 590



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 161/336 (47%), Gaps = 10/336 (2%)

Query: 67  ESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           ++C+ TV + T L+ + +  G   EA  + + ++  G KP + TY T++  +  +   + 
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              ++  +E  G +PD I +N ++ A    G  EE      KM      P   TY+ LI 
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
                GK EE++ LL LM  +G + P+  +Y+ L+ A+C E  +  A   +  M + G  
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PD+V YNT+     +NG+ADQA E+  ++   G  PN  +   + S     G    AL  
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMN 361
              M   G+ P+ + +N +I        R+G VDE   L+ + R    +P V+TY+ ++ 
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLC----REGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            +  A  ++    + + M   G +P+   Y++L +G
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 112/226 (49%), Gaps = 1/226 (0%)

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           C+ G   E+L    TM   G +P++++   LIKGF  + +      V+ ++++F   PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
             Y+ ++N +     +D    + D M      PD   Y+I+        + + A ++L  
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           ++     P V+ +T +I     +G +D A+++ D+M   G+ P++ T+ T++ G  +   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             RA E+++ ++  G  P   ++ +L  A    G  +E +++++K+
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKM 324



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 45/189 (23%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIMSQVEEN 136
           ++ +L + GK  +A  IF  L E G  P+  +Y T+ +AL +   +  ++H I+ ++  N
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL-EMMSN 467

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE-------------------------- 170
           G+DPD I +N++I+     G ++EA +    M+                           
Sbjct: 468 GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 527

Query: 171 ---------SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR-----EGNVKPNLRTY 216
                    +G  P  +TY  LI+G G AG   E+++L + + R     E + K   RT+
Sbjct: 528 INVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTF 587

Query: 217 ---NVLVRA 222
              NVL R+
Sbjct: 588 PLLNVLQRS 596


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 223/457 (48%), Gaps = 15/457 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNN-LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           ++ SL   G    A  IF   +   G  P++VTY T++  L       +   +  ++ E 
Sbjct: 7   VLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVER 66

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  PD + +N +I++  ++G++EEA      M   G  P   TY+ LI G    G+ +E+
Sbjct: 67  GHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEA 126

Query: 197 VKLLDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK--PDVVTYNT 253
            +L+  M+R+  +V PN+ TYN  +   C +    EA  +M  +    ++  PD VT++T
Sbjct: 127 RELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFST 186

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G+ D+A  V  +M   G  PN  T   +++G CK  K++ A     +M + G
Sbjct: 187 LIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKG 246

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR--------VNPDVITYSTIMNAWST 365
           V P+++ +++L+  F +      VDE L L+            + PD +T++ ++     
Sbjct: 247 VTPDVITYSVLVDAFCK---ASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
           AG  ++   +F++M    ++PD   +  L  G  +  + E A ++L  M   G  PNVV 
Sbjct: 304 AGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVT 363

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +  ++ G C  G ++ A +  ++M   G  P+  T+ +L++    A +   A +++  +K
Sbjct: 364 YNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELK 423

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +FG  P   T+ +L +    +G T++A  +L ++  K
Sbjct: 424 SFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGK 460



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 205/435 (47%), Gaps = 10/435 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   ++N L +         +F  L+E GH P +VTY TL+ +L           + 
Sbjct: 36  TIVTYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLH 95

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM--KESGLTPTTSTYNTLIKGYG 188
             +   G  P+ + ++ +IN   + G ++EA +   +M  K   + P   TYN+ + G  
Sbjct: 96  GDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLC 155

Query: 189 IAGKPEESVKLLDLMSREGN--VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
                 E+ +L+  + R+G+  V P+  T++ L+   C    I EA +V   M A G  P
Sbjct: 156 KQSMTAEACELMRSL-RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVP 214

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           +V+TYN +     +  + ++A  +I  M   GV P+  T  +++  +CK  ++ EAL   
Sbjct: 215 NVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 274

Query: 307 RTMKEYGVHPNLVI-----FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
             M   G  PN+++     FN+LI G  +  + +    +   M    + PDV+T+  +++
Sbjct: 275 HGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALID 334

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
               AG ++  ++I D MG  G+ P+   Y+ L  G  +    E+A + L  M+ SG  P
Sbjct: 335 GLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVP 394

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           + + + +++   C     D A+++  ++   G  P+  T+  L+ G  ++ +  +A  +L
Sbjct: 395 DSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVL 454

Query: 482 QIMKAFGVHPQKSTF 496
           + M   G  P   TF
Sbjct: 455 EEMVGKGHQPDSFTF 469



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 207/433 (47%), Gaps = 10/433 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++SL + G  +EA+ +  ++   G  P++VTY+ L+  L    R +    ++ 
Sbjct: 72  VVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQ 131

Query: 132 QVEENGMD--PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL--TPTTSTYNTLIKGY 187
           ++     D  P+ I +N+ ++   +     EA +    +++  L  +P T T++TLI G 
Sbjct: 132 EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 191

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G+ +E+  + D M   G V PN+ TYN LV   C    +  A  ++  M   G+ PD
Sbjct: 192 CKCGQIDEACSVFDDMIAGGYV-PNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPD 250

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN-----GRTCGIIISGYCKEGKIKEA 302
           V+TY+ +  A+ +    D+A E++  M   G  PN       T  I+I+G CK G  ++A
Sbjct: 251 VITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQA 310

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M    + P+++ F  LI G  +    +   ++L LM    V P+V+TY+ +++ 
Sbjct: 311 SALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHG 370

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              +G +++  +  ++M  +G  PD+  Y  L     R    + A +L+  +   G+ P+
Sbjct: 371 LCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPD 430

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            V +  ++ G    G  ++AI V ++M   G  P+  TF     G   +       E+L+
Sbjct: 431 TVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLR 490

Query: 483 IMKAFGVHPQKST 495
           ++ A G+ P  +T
Sbjct: 491 VVLAKGMLPDATT 503



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 175/358 (48%), Gaps = 17/358 (4%)

Query: 177 TSTYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
            + YN +++    AG    ++++    M+R+G V P + TYN ++   C   ++     +
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDG-VAPTIVTYNTIINGLCKSNDLGAGMEL 59

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
             ++   G  PDVVTYNT+  +  + G+ ++A  +  +M   G  PN  T  ++I+G CK
Sbjct: 60  FEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCK 119

Query: 296 EGKIKEALRFARTM--KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK-----EFR 348
            G+I EA    + M  K   V PN++ +N  + G  +   +    E   LM+       R
Sbjct: 120 VGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCK---QSMTAEACELMRSLRDGSLR 176

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           V+PD +T+ST+++     G +D+   +FDDM   G  P+   Y+ L  G  +  + E+A 
Sbjct: 177 VSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAH 236

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL-----KTFET 463
            ++ +M++ G  P+V+ ++ ++  +C    +D A+E+   M   G +PN+      TF  
Sbjct: 237 AMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNI 296

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           L+ G  +A    +A  + + M A  + P   TF  L +     G  + A+ IL  + N
Sbjct: 297 LIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGN 354



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 95/386 (24%), Positives = 188/386 (48%), Gaps = 9/386 (2%)

Query: 64  MNKESCRTVRSM---TKLMNSLIERGKPQEAQAIFNNLIEGGHK--PSLVTYTTLLAALT 118
           M ++SC  + ++      ++ L ++    EA  +  +L +G  +  P  VT++TL+  L 
Sbjct: 133 MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 192

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
              + +   S+   +   G  P+ I +NA++N   ++  ME A      M + G+TP   
Sbjct: 193 KCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 252

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREG---NV-KPNLRTYNVLVRAWCNEKNITEAWN 234
           TY+ L+  +  A + +E+++LL  M+  G   NV  P+  T+N+L+   C   N  +A  
Sbjct: 253 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASA 312

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           +  +M A  ++PDV+T+  +     + G+ + A +++  M + GV PN  T   ++ G C
Sbjct: 313 LFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLC 372

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           K G+I+EA +F   M   G  P+ + +  L+         D   ++++ +K F  +PD +
Sbjct: 373 KSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTV 432

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           TY+ +++    +G  ++   + ++M   G +PD+  ++    G  R        ELL  +
Sbjct: 433 TYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVV 492

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMD 440
           +  G  P+    ++I+   C  G +D
Sbjct: 493 LAKGMLPDATTCSSILDWVCRSGKLD 518



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 126/289 (43%), Gaps = 14/289 (4%)

Query: 288 IIISGYCKEGKIKEALRFAR-TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
           I++   C+ G    AL   R  M   GV P +V +N +I G  +  D     E+   + E
Sbjct: 6   IVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEELVE 65

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
              +PDV+TY+T++++   AG +++ + +  DM   G  P+   YS+L  G  +    ++
Sbjct: 66  RGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDE 125

Query: 407 AEELL--MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG--VSPNLKTFE 462
           A EL+  MT       PN++ + + + G C       A E+   + +    VSP+  TF 
Sbjct: 126 ARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFS 185

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           TL+ G  +  Q   A  +   M A G  P   T+  L          + A  ++  + +K
Sbjct: 186 TLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDK 245

Query: 523 ERTNEMEAEEDIP--------VESLERLYHKEATTASYPNLLQIPNVVS 563
             T ++     +         V+    L H  A+    PN+L +P+ V+
Sbjct: 246 GVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVL-VPDKVT 293


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/489 (25%), Positives = 224/489 (45%), Gaps = 38/489 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   ++N L ++G+ QEA+ I +++      P+  TYT+L+         +   ++ 
Sbjct: 201 SLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMF 260

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ ++G DP+S+ ++ +IN     G +EEAMD   +M + G+ PT  TY   +     A
Sbjct: 261 DRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDA 320

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E+V+LL  M + G V PN++T+  L+     +     A  + HKM A G+ P  VT
Sbjct: 321 GCSSEAVELLGKMKKRGCV-PNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVT 379

Query: 251 YNT-----------------------------------IATAYAQNGEADQAEEVIVEME 275
           YN                                    I   +   G+  +A  +  +M 
Sbjct: 380 YNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKML 439

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
             G  PN  T   +I GYCK+G +  A+R    MK  G+ P+   +  LI GF      +
Sbjct: 440 KAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLE 499

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
               +   M E  ++P+ +TY+ I++ +     +D    +F  M ++G  P +  Y+++ 
Sbjct: 500 HATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMI 559

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G+ +     +AE     M++ G  PNV+ +T+ I G C +G    A ++F +M +    
Sbjct: 560 SGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYF 619

Query: 456 PNLKTFETLMWGYSEARQPWRAE--EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           PNL T+ +L++G  +  +   AE   +L  +  +G  P   T+  L +     G   EA 
Sbjct: 620 PNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEAD 679

Query: 514 RILSKIKNK 522
           +++  ++ K
Sbjct: 680 QLVVSMQKK 688



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 225/452 (49%), Gaps = 1/452 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ S T L+  L +      A+ ++  ++  G +PSL+T+ T++  L  + R      IM
Sbjct: 166 TLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTFNTMINILCKKGRVQEAKLIM 225

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S +      P++  + ++I     + N++ A   F +M + G  P + TY+TLI G    
Sbjct: 226 SHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSE 285

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ EE++ +L+ M ++G ++P + TY + + + C+    +EA  ++ KM   G  P++ T
Sbjct: 286 GRLEEAMDMLEEMVQKG-IEPTVYTYTIPLVSLCDAGCSSEAVELLGKMKKRGCVPNIQT 344

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +  + +  +++G+ + A  +  +M  +G+ P   T   +I+  C EG+ + A    + M 
Sbjct: 345 FTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGRFETAFTIFKWML 404

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            +G  P+   +N +IK F  + D      +   M +   +P+VITY+T++  +   G ++
Sbjct: 405 SHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLN 464

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               + + M   G+KPDA  Y+ L  G+ R  + E A  L   M+E G  PN V +T II
Sbjct: 465 NAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAII 524

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+ +   +D A+ +F KM E G  P+ +T+  ++ G+S+      AE     M   G+ 
Sbjct: 525 DGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLL 584

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+    +     G T  A +I  +++ +
Sbjct: 585 PNVITYTSFIDGLCRNGRTGLAFKIFHEMEKR 616



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 212/426 (49%), Gaps = 8/426 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C   +++ T L++ L   GK + A  +++ ++  G  P+ VTY  L+  L ++ R
Sbjct: 333 MKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQLCVEGR 392

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F +  +I   +  +G  P +  +N +I  F   G++++AM  F KM ++G +P   TYNT
Sbjct: 393 FETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNT 452

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY   G    +++LL++M   G +KP+  TY  L+  +     +  A ++ + M   
Sbjct: 453 LIYGYCKQGNLNNAMRLLEIMKGNG-LKPDAWTYTELISGFSRGGKLEHATSLFYGMMEH 511

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P+ VTY  I   Y    + D A  +  +M  +G  P+ +T  ++ISG+ K   I EA
Sbjct: 512 GISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEA 571

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEFRVNPDVITYSTIMN 361
             F   M + G+ PN++ +   I G      R G+  ++   M++    P++ TYS+++ 
Sbjct: 572 ENFCGKMVKQGLLPNVITYTSFIDGLCR-NGRTGLAFKIFHEMEKRNYFPNLYTYSSLIY 630

Query: 362 AWSTAGFMDKCKEIFDDMGKA---GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
                G  +   E+++ + +    G +P+   Y+ L KG   E    +A++L+++M + G
Sbjct: 631 GLCQEGRAED-AEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKG 689

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P+  I+  ++ G C +  ++ A+ +F  M   G   +L  ++ L+    +      A+
Sbjct: 690 LQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQ 749

Query: 479 EILQIM 484
            I Q M
Sbjct: 750 CIFQTM 755



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 186/382 (48%), Gaps = 5/382 (1%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G  Q+A  IF+ +++ G  P+++TY TL+     Q   N+   ++  ++ NG+ PD+  +
Sbjct: 426 GDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTY 485

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             +I+ FS  G +E A   F+ M E G++P   TY  +I GY    K ++++ L   M  
Sbjct: 486 TELISGFSRGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVE 545

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            GN+ P+ +TYNV++  +    +I+EA N   KM   G+ P+V+TY +      +NG   
Sbjct: 546 SGNL-PSSQTYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTG 604

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF---ARTMKEYGVHPNLVIFN 322
            A ++  EME     PN  T   +I G C+EG+ ++A  +   AR +  YG  PN+  + 
Sbjct: 605 LAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLAR-LTHYGCEPNVDTYT 663

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            L+KG          D+++  M++  + P    Y  ++        ++    IF  M   
Sbjct: 664 TLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTL 723

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G +     Y  L     +E   E+A+ +  TM+E  ++ + V++T ++ G   +G  D  
Sbjct: 724 GFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEVVWTVLLDGLLKEGETDLC 783

Query: 443 IEVFDKMCEHGVSPNLKTFETL 464
           +++   M     + N +T+  L
Sbjct: 784 LKLLHVMESRNCTLNFQTYVML 805



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/309 (22%), Positives = 141/309 (45%), Gaps = 3/309 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T +++      K  +A A+F  ++E G+ PS  TY  +++  +     +   +   ++
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNSISEAENFCGKM 578

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            + G+ P+ I + + I+    +G    A   F +M++    P   TY++LI G    G+ 
Sbjct: 579 VKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRA 638

Query: 194 EESVKLLDLMSR--EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           E++ ++ +L++R      +PN+ TY  LV+  C E    EA  ++  M   G++P    Y
Sbjct: 639 EDA-EMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIY 697

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     +N + + A  +   M+  G Q +      +I   CKE  I+EA    +TM E
Sbjct: 698 RALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLE 757

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
              + + V++ +L+ G ++  + D   ++L +M+      +  TY  +    S      K
Sbjct: 758 KHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLARELSALDCAIK 817

Query: 372 CKEIFDDMG 380
             +I   +G
Sbjct: 818 IPQISQQLG 826



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/216 (22%), Positives = 93/216 (43%), Gaps = 3/216 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS--IHSI 129
           V + T  ++ L   G+   A  IF+ + +  + P+L TY++L+  L  + R     ++++
Sbjct: 587 VITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNL 646

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           ++++   G +P+   +  ++      G   EA      M++ GL P+   Y  L+ G   
Sbjct: 647 LARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEIYRALLIGECK 706

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
             K E ++ +   M   G  + +L  Y  L+ A C E  I EA  +   M       D V
Sbjct: 707 NLKVESALNIFYSMDTLG-FQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSDEV 765

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
            +  +     + GE D   +++  ME      N +T
Sbjct: 766 VWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQT 801


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 140/505 (27%), Positives = 248/505 (49%), Gaps = 13/505 (2%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M KE C     + + L+N L   G+  EA  +   +IE G +P++ TYT  + AL   + 
Sbjct: 301 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEH 360

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +++++++ G  P+   + A+I+  S  G +E A+  + KM + GL P T TYN 
Sbjct: 361 EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNA 420

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI    + G+   ++K+   M   G++  N +TYN +++  C   +I +A  +  KM   
Sbjct: 421 LINELCVGGRFSTALKIFHWMEGHGSL-ANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM 479

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P VVTYNT+   Y   G  + A  ++  M+ NG +P+  T   ++SG+ K GK++ A
Sbjct: 480 GPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESA 539

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLAL---MKEFRVNPDVITYST 358
             + + M E G++PN V +  LI G      +DG VD  L+L   M+E   NP+V +Y+ 
Sbjct: 540 SFYFQEMVECGLNPNPVSYTTLIDGH----SKDGKVDIALSLLERMEEMGCNPNVESYNA 595

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++N  S      + ++I D M + G+ P+   Y+ L  G  R    + A ++   M +  
Sbjct: 596 VINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 655

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PN+  ++++I G C +G  D A  +  +M   G++P+  TF +L+ G+    +   A 
Sbjct: 656 CLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAF 715

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVES 538
            +L+ M   G  P   T+ +L +  +   L  E K     ++++   +    E+D+  E 
Sbjct: 716 LLLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEK---VAVQHEAVYSFSPHEKDVNFEI 772

Query: 539 LERLYHKEATTASYPNLLQIPNVVS 563
           +  L  + +     P L     +VS
Sbjct: 773 VSNLLARMSEIGCEPTLDTYSTLVS 797



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 222/452 (49%), Gaps = 1/452 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   L+N L ++GK +EA+ I + + +    P + TYT+L+      +  +    + 
Sbjct: 239 SLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVF 298

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G DP+S+ ++ +IN     G ++EA+D   +M E G+ PT  TY   I      
Sbjct: 299 DRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAI 358

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              EE+++L+  M + G  +PN++TY  L+        +  A  + HKM   G+ P+ VT
Sbjct: 359 EHEEEAIELVARMKKRG-CRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 417

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +       G    A ++   ME +G   N +T   II G C  G I++A+     M 
Sbjct: 418 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 477

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G  P +V +N LI G++   + +    +L LMKE    PD  TY+ +++ +S  G ++
Sbjct: 478 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 537

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                F +M + G+ P+  +Y+ L  G+ ++ + + A  LL  M E G +PNV  +  +I
Sbjct: 538 SASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVI 597

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G   +     A ++ DKM E G+ PN+ T+ TL+ G     +   A +I   M+     
Sbjct: 598 NGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 657

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+  L       G   EA+ +L +++ K
Sbjct: 658 PNLYTYSSLIYGLCQEGKADEAEILLKEMERK 689



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 224/433 (51%), Gaps = 1/433 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+ ++  ++  G +PSL+T+ TL+  L+ + +      I+SQ+ +  + PD   + ++I 
Sbjct: 224 ARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLIL 283

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
               + N++ A   F +M + G  P + TY+TLI G    G+ +E++ +L+ M  +G ++
Sbjct: 284 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG-IE 342

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P + TY + + A C  ++  EA  ++ +M   G +P+V TY  + +  ++ G+ + A  +
Sbjct: 343 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 402

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             +M   G+ PN  T   +I+  C  G+   AL+    M+ +G   N   +N +IKG   
Sbjct: 403 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 462

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
             D +    +   M +    P V+TY+T++N + T G ++    + D M + G +PD   
Sbjct: 463 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 522

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ L  G+ +  + E A      M+E G +PN V +TT+I G   DG +D A+ + ++M 
Sbjct: 523 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERME 582

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E G +PN++++  ++ G S+  +   AE+I   M   G+ P   T+  L +     G T+
Sbjct: 583 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQ 642

Query: 511 EAKRILSKIKNKE 523
            A +I   ++ ++
Sbjct: 643 FAFKIFHDMEKRK 655



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/518 (24%), Positives = 234/518 (45%), Gaps = 60/518 (11%)

Query: 68  SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           S    ++  +++  L   G  ++A  +F  +++ G  P++VTY TL+     +   N+  
Sbjct: 446 SLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAA 505

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            ++  ++ENG +PD   +N +++ FS+ G +E A   F +M E GL P   +Y TLI G+
Sbjct: 506 RLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGH 565

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              GK + ++ LL+ M   G   PN+ +YN ++     E   +EA  +  KMA  G+ P+
Sbjct: 566 SKDGKVDIALSLLERMEEMG-CNPNVESYNAVINGLSKENRFSEAEKICDKMAEQGLLPN 624

Query: 248 VVTYNTIATAYAQNG-----------------------------------EADQAEEVIV 272
           V+TY T+     +NG                                   +AD+AE ++ 
Sbjct: 625 VITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLK 684

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---- 328
           EME  G+ P+  T   +I G+   G+I  A    R M + G  PN   +++L+KG     
Sbjct: 685 EMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGCKPNYRTYSVLLKGLQKEC 744

Query: 329 ------VEI--------------MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
                 V +              ++ + V  +LA M E    P + TYST+++     G 
Sbjct: 745 LLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCEPTLDTYSTLVSGLCRKGR 804

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
             + +++  DM + G  PD   Y  L   + +  E + A ++  ++   GF  ++ I+  
Sbjct: 805 FYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRA 864

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I   C  G ++ A  +FD M E   + +   +  L+ G  +  +     ++L IM++  
Sbjct: 865 LICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKN 924

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTN 526
             P   T+++L       G + E++ +  K+K  + +N
Sbjct: 925 FTPNIQTYVILGRELSRIGKSIESEPLADKLKVLKDSN 962



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 8/313 (2%)

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           +L + N L+      + +  A N+  +M  SG++P ++T+NT+    ++ G+  +AE ++
Sbjct: 204 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELIL 263

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL-RFARTMKEYGVHPNLVIFNLLIKGFVE 330
            ++    + P+  T   +I G+C+   +  A   F R +KE G  PN V ++ LI G   
Sbjct: 264 SQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKE-GCDPNSVTYSTLING--- 319

Query: 331 IMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           + +   VDE L +++E     + P V TY+  + A       ++  E+   M K G +P+
Sbjct: 320 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 379

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ L  G  R  + E A  L   M++ G  PN V +  +I+  C  G    A+++F 
Sbjct: 380 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 439

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            M  HG   N +T+  ++ G        +A  + + M   G  P   T+  L       G
Sbjct: 440 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 499

Query: 508 LTKEAKRILSKIK 520
               A R+L  +K
Sbjct: 500 NVNNAARLLDLMK 512



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 137/269 (50%)

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + +L+ + R+    P      ++++A  NE+ I    + +++++  G    + + NT+  
Sbjct: 154 ISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLI 213

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
             A+    + A  +  +M ++G+QP+  T   +I+   K+GK++EA      + +Y + P
Sbjct: 214 QLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSP 273

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++  +  LI G     + D    V   M +   +P+ +TYST++N     G +D+  ++ 
Sbjct: 274 DVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDML 333

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M + GI+P  + Y++        +  E+A EL+  M + G  PNV  +T +ISG    
Sbjct: 334 EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL 393

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           G ++ AI ++ KM + G+ PN  T+  L+
Sbjct: 394 GKLEVAIGLYHKMLKEGLVPNTVTYNALI 422



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 106/227 (46%), Gaps = 6/227 (2%)

Query: 288 IIISGYCK-EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
           I++   C+ E +I+    F   +   G   +L   N L+    +    +G   +   M  
Sbjct: 174 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 233

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             + P ++T++T++N  S  G + + + I   + +  + PD   Y+ L  G+ R +  + 
Sbjct: 234 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 293

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  +   M++ G  PN V ++T+I+G C++G +D A+++ ++M E G+ P + T+   + 
Sbjct: 294 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 353

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
                     A E++  MK  G  P   T+  L      +GL++  K
Sbjct: 354 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL-----ISGLSRLGK 395



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/266 (22%), Positives = 117/266 (43%), Gaps = 31/266 (11%)

Query: 328 FVEIMDRDGVDEVLA--------LMKEFRVNPDVITYSTIMNAWSTAGF----------- 368
           F+ +++R   D V A        ++K  R   ++   +  +N  S  GF           
Sbjct: 153 FISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLL 212

Query: 369 --------MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
                   ++  + ++  M  +GI+P    ++ L     ++ +  +AE +L  + +    
Sbjct: 213 IQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLS 272

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+V  +T++I G C + ++D A  VFD+M + G  PN  T+ TL+ G     +   A ++
Sbjct: 273 PDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDM 332

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLE 540
           L+ M   G+ P   T+ L   A  A    +EA  +++++K +     ++    + +  L 
Sbjct: 333 LEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL-ISGLS 391

Query: 541 RLYHKEATTASYPNLLQ---IPNVVS 563
           RL   E     Y  +L+   +PN V+
Sbjct: 392 RLGKLEVAIGLYHKMLKEGLVPNTVT 417


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 146/577 (25%), Positives = 268/577 (46%), Gaps = 90/577 (15%)

Query: 16  KYQSGSTIVKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSM 75
           K QS   I+    G  +    N P    Q+++  K    +P        N  +C T    
Sbjct: 134 KVQSLRVILDTSIGAYVAC--NRPHHAAQIFNRMKRLHLKP--------NLLTCNT---- 179

Query: 76  TKLMNSLIER-GKPQE--AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
             L+N+L+    KP    ++AIF+++I+ G K +  T+  L+    I+ + +    ++ +
Sbjct: 180 --LINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGK 237

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +++    PD++ +N +++   + G + EA D    MK +GL P  +T+N L+ GY   G 
Sbjct: 238 MKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGW 297

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV----------------- 235
            +E+ +++DLM+ + NV P++ TYN+L+   C +  I EA+ +                 
Sbjct: 298 LKEAAQVIDLMA-QNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYN 356

Query: 236 ------------------MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
                             + KM   G+KP+ VTYN +   Y + G+ D A   + +ME +
Sbjct: 357 TLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEES 416

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG---------- 327
           G  P+  T   +I+GYCK G++ EA R    M   G+  N V  N ++            
Sbjct: 417 GFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDA 476

Query: 328 ------------FVE-------IMD--RDGVD-EVLAL---MKEFRVNPDVITYSTIMNA 362
                       FV+       IM   +DG   E + L   MKE  + P +ITY+T++  
Sbjct: 477 YKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGG 536

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              +G  D+  +  +++ ++G+ PD   Y+ +  GY RE + EKA +    M++  F P+
Sbjct: 537 LCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPD 596

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           +     ++ G C++G +D+A+++F+     G + +  T+ T++ G  +  +   A ++L 
Sbjct: 597 LFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLA 656

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            M+   + P   T+  +  A    G  KEA+  +S+I
Sbjct: 657 EMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRI 693



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/388 (30%), Positives = 195/388 (50%), Gaps = 12/388 (3%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           +  +  I A+        A   F +MK   L P   T NTLI    +    + SV L   
Sbjct: 140 VILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINAL-VRYPSKPSVYLSKA 198

Query: 203 MSREG---NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           +  +     VK N  T+N+L+   C E  ++EA  ++ KM      PD V+YNTI     
Sbjct: 199 IFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLC 258

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           + G+ ++A +++++M++NG+ PN  T  I++SGYCK G +KEA +    M +  V P++ 
Sbjct: 259 KKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVW 318

Query: 320 IFNLLIKGFVEIMDRDG-VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            +N+LI G      +DG +DE   L   M+  ++ PDV+TY+T++N         K  E+
Sbjct: 319 TYNMLIGGLC----KDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFEL 374

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            D M   G+KP+A  Y+++ K YV+E + + A   L  M ESGF P+ V F T+I+G+C 
Sbjct: 375 IDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCK 434

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G +  A  + D+M   G+  N  T  T++      R+   A ++L      G    + +
Sbjct: 435 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 494

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKE 523
           +  L       G + EA ++  ++K KE
Sbjct: 495 YGTLIMGYFKDGKSVEAMKLWDEMKEKE 522



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 184/393 (46%), Gaps = 17/393 (4%)

Query: 83  IERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS 142
           ++ GK   A      + E G  P  VT+ TL+       R +    +M ++   G+  +S
Sbjct: 398 VKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNS 457

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           +  N +++       +++A        + G      +Y TLI GY   GK  E++KL D 
Sbjct: 458 VTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDE 517

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           M +E  + P++ TYN ++   C+     ++ + ++++  SG+ PD  TYNTI   Y + G
Sbjct: 518 M-KEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREG 576

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
           + ++A +   +M     +P+  TC I++ G C EG + +AL+   T    G   + V +N
Sbjct: 577 QVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYN 636

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            +I G  +    +   ++LA M+E ++ PD  TY+ I++A + AG M + +E        
Sbjct: 637 TIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALADAGRMKEAEEFMS----- 691

Query: 383 GIKPDAHAYSILAKGYVREQ--EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
                     I+ +G +++Q     K +    +       PN V F+  I+  C+ G   
Sbjct: 692 ---------RIVEQGKLQDQTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYK 742

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
            A+ +  +  + G++ +  T+ +LM G  + R+
Sbjct: 743 DAMHMVQESTQKGITLHKSTYISLMEGLIKRRK 775



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/265 (20%), Positives = 104/265 (39%), Gaps = 13/265 (4%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           KE   ++ +   ++  L   GK  ++    N L+E G  P   TY T++     + +   
Sbjct: 521 KEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQVEK 580

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
                +++ +    PD    N ++      G +++A+  F      G      TYNT+I 
Sbjct: 581 AFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIIS 640

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G     + EE+  LL  M  E  + P+  TYN ++ A  +   + EA   M ++   G  
Sbjct: 641 GLCKEDRFEEAFDLLAEM-EEKKLGPDCYTYNAILSALADAGRMKEAEEFMSRIVEQGKL 699

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
            D            Q    ++ +            PN  T    I+  C +GK K+A+  
Sbjct: 700 QD------------QTISLNKRKIESSSETSQESDPNSVTFSEQINELCTQGKYKDAMHM 747

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVE 330
            +   + G+  +   +  L++G ++
Sbjct: 748 VQESTQKGITLHKSTYISLMEGLIK 772


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 213/437 (48%), Gaps = 2/437 (0%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +E C R   S T L++   E GK  EA  +F  + E G  P + TYT L+AA     +
Sbjct: 251 MPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGK 310

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                    ++ ENG++P+   +  +I+ F + G M+E M+    M E GL  +   +N 
Sbjct: 311 ETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNA 370

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY   G  E+++ +LD M +   V PN RTYN L+  +C +K++  A  +++KM  +
Sbjct: 371 LIDGYCKRGMMEDAICVLDSM-KLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYEN 429

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            + P++VTYNT+     +    D A  +   M  +G  P+ RT    I   CK GK+++A
Sbjct: 430 KLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQA 489

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
            +   ++KE     N  ++  LI G+ +         +   M      P+ IT++ +++ 
Sbjct: 490 HQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDG 549

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G ++    + D MGK   KP  H Y+IL +  +RE + ++A   L  MI SG  PN
Sbjct: 550 LRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPN 609

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           VV +T  I  +C  G +  A E+  K+ E G+  +   ++ L+  Y    Q   A  +L 
Sbjct: 610 VVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLI 669

Query: 483 IMKAFGVHPQKSTFLLL 499
            M   G  P + T+ +L
Sbjct: 670 RMFDTGCEPSRQTYSIL 686



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/406 (27%), Positives = 196/406 (48%), Gaps = 4/406 (0%)

Query: 62  FCMNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           F M ++ C   V + T L+ +  E GK  EA   F  ++E G +P++ TYT L+      
Sbjct: 284 FQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKV 343

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
            + +    ++S + E G+    + FNA+I+ + + G ME+A+     MK + + P + TY
Sbjct: 344 GKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTY 403

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           N LI G+      + ++ LL+ M  E  + PNL TYN L+   C  + +  AW + H M 
Sbjct: 404 NELICGFCRKKSMDRAMALLNKM-YENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMI 462

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
             G  PD  T+        + G+ +QA +V   ++    + N      +I GYCK  K  
Sbjct: 463 KDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFS 522

Query: 301 EA-LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
           +A L F R + E G  PN + FN+L+ G  +    +    ++ +M +F   P V TY+ +
Sbjct: 523 DAHLLFKRMLFE-GCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTIL 581

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +         D+     D M  +G +P+   Y+   K Y R+    +AEE+++ + E G 
Sbjct: 582 IEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGI 641

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
             +  I+  +++ +   G +D A  V  +M + G  P+ +T+  L+
Sbjct: 642 LLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILL 687



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 199/431 (46%), Gaps = 1/431 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S  +L   L   G   E   +F +++  G +P+L+++ T++ A           +  
Sbjct: 154 SVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYF 213

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + + G   DS  + ++I  + +   + +A   F  M + G      +Y  LI G+   
Sbjct: 214 CGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEV 273

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK +E+++L   M  +G   P++ TY VLV A+C     TEA     +M  +G++P+V T
Sbjct: 274 GKIDEALELFFQMKEDGCF-PDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYT 332

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +   + + G+ D+  E++  M   G+  +      +I GYCK G +++A+    +MK
Sbjct: 333 YTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMK 392

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              V PN   +N LI GF      D    +L  M E +++P+++TY+T+++    A  +D
Sbjct: 393 LNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVD 452

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               +   M K G  PD   +        +  + E+A ++  ++ E     N  ++T +I
Sbjct: 453 SAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALI 512

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+C       A  +F +M   G  PN  TF  L+ G  +  +   A  ++ +M  F   
Sbjct: 513 DGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAK 572

Query: 491 PQKSTFLLLAE 501
           P   T+ +L E
Sbjct: 573 PTVHTYTILIE 583



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 121/474 (25%), Positives = 204/474 (43%), Gaps = 29/474 (6%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C   R+  +L+     +     A A+ N + E    P+LVTY TL+  L   +  +S   
Sbjct: 397 CPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWR 456

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +   + ++G  PD   F A I+   + G +E+A   F  +KE         Y  LI GY 
Sbjct: 457 LHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYC 516

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            A K  ++  L   M  EG   PN  T+NVL+     E  + +A +++  M     KP V
Sbjct: 517 KAEKFSDAHLLFKRMLFEGCF-PNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTV 575

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TY  +     +  + D+A   + +M  +G QPN  T    I  YC++G++ EA      
Sbjct: 576 HTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVK 635

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM-------- 360
           +KE G+  +  I+++L+  +  I   D    VL  M +    P   TYS ++        
Sbjct: 636 IKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKY 695

Query: 361 -------------------NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
                              N W  A F +    +F+ M + G  P+ + YS L KG  + 
Sbjct: 696 NKEGMGLDLNSTNISVDNANIWKIADF-EIITMLFEKMVEQGCVPNVNTYSKLIKGLCKV 754

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
           +    A  L   M ESG  P+  I  +++S  C  G  + A+ + D M E+    +L+++
Sbjct: 755 EHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESY 814

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           + L+ G  E     +AEEI + + + G +  +  + +L +     G   E  ++
Sbjct: 815 KLLVCGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQL 868



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 119/457 (26%), Positives = 194/457 (42%), Gaps = 28/457 (6%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
            N+LI    P    ++FNN       P+L   T L     I  +   IH++ S       
Sbjct: 60  FNTLIPSLTPTHLSSLFNN-------PNLHPLTALNFFKWIHYQHGFIHTVHSY------ 106

Query: 139 DPDSIFFNAVINAFSESG------------NMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
               + F  V N F  +             +  EA      +     + + ++YN L   
Sbjct: 107 --QPLLFILVRNGFLRAAENVRNSMIKSCVSSHEARFVLNLLTHHEFSLSVTSYNRLFMV 164

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
               G  +E   L   M  +G V+PNL ++N +V A C   N+  A      +   G   
Sbjct: 165 LSRFGLIDELNCLFKDMLNDG-VEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCC 223

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           D  TY ++   Y +  E   A +V   M   G   N  +   +I G+C+ GKI EAL   
Sbjct: 224 DSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELF 283

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             MKE G  P++  + +L+  F E+       +    M E  + P+V TY+ +++ +   
Sbjct: 284 FQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKV 343

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G MD+  E+   M + G+      ++ L  GY +    E A  +L +M  +   PN   +
Sbjct: 344 GKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTY 403

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
             +I G+C   SMDRA+ + +KM E+ +SPNL T+ TL+ G  +AR    A  +  +M  
Sbjct: 404 NELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIK 463

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            G  P + TF    +     G  ++A ++   +K K 
Sbjct: 464 DGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKH 500



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/345 (23%), Positives = 163/345 (47%), Gaps = 27/345 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + GK ++A ++ + + +   KP++ TYT L+  +  +  F+  +  + Q+  +G
Sbjct: 546 LLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSG 605

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + + A I A+   G + EA +   K+KE G+   +  Y+ L+  YG  G+ + + 
Sbjct: 606 CQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAF 665

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEK-------------NIT----EAWNV----- 235
            +L  M   G  +P+ +TY++L++    EK             NI+      W +     
Sbjct: 666 GVLIRMFDTG-CEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTNISVDNANIWKIADFEI 724

Query: 236 ----MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
                 KM   G  P+V TY+ +     +      A  +   M+ +G+ P+      ++S
Sbjct: 725 ITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLS 784

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
             CK G  +EALR   +M EY    +L  + LL+ G  E  +++  +E+   +     N 
Sbjct: 785 SCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQEKAEEIFRSLLSCGYNY 844

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
           D + +  +++     G++D+C ++ D M K G +  +  +++L++
Sbjct: 845 DEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTMLSQ 889


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/499 (25%), Positives = 226/499 (45%), Gaps = 39/499 (7%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNN-LIEGGHKPSLVTYTTLLAALTIQ 120
           F   + S R+V     ++ SL   G+   A  IF   +   G  P++VTY T++  L   
Sbjct: 35  FFFVRSSSRSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKS 94

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
               +   +  ++ + G  PD + +N +I++  ++G++EEA      M   G  P   TY
Sbjct: 95  NELGAGMELFEELVKRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTY 154

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHK- 238
           + LI G    G+ +E+ +L+  M+R+  +V PN+ TYN  +   C +    EA  +M   
Sbjct: 155 SVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL 214

Query: 239 ----------------------------------MAASGMKPDVVTYNTIATAYAQNGEA 264
                                             M A G  P+VVTYN +     +  + 
Sbjct: 215 RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNDDMIAGGYVPNVVTYNALVNGLCKADKM 274

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           ++A  +I  M   GV P+  T  +++  +CK  ++ EAL     M   G  PN+V FN +
Sbjct: 275 ERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSI 334

Query: 325 IKGFVEIMDRDGVDEVLALMKEFR-VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           I G  +  DR G    +AL    R + PD +T++ ++     AG  ++   +F++M    
Sbjct: 335 IDGLCK-SDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKN 393

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           ++PD   +  L  G  +  + E A ++L  M   G  PNVV +  ++ G C  G ++   
Sbjct: 394 MQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPC 453

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           E  ++M   G  P   T+ +L++    A +   A +++  +K+FG  P   T+ +L +  
Sbjct: 454 EFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGL 513

Query: 504 RATGLTKEAKRILSKIKNK 522
             +G T++A  +L ++  K
Sbjct: 514 WKSGKTEQAITVLEEMVGK 532



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 210/428 (49%), Gaps = 7/428 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHK--PSLVTYTTLLAALTIQKRFNSIHSI 129
           V + + L+N L + G+  EA+ +   +        P+++TY + L  L  Q        +
Sbjct: 151 VVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACEL 210

Query: 130 MSQVEENGM--DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           M  + +  +   PD++ F+ +I+   + G  +EA +    M   G  P   TYN L+ G 
Sbjct: 211 MRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACND--DMIAGGYVPNVVTYNALVNGL 268

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
             A K E +  +++ M  +G V P++ TY+VLV A+C    + EA  ++H MA+ G  P+
Sbjct: 269 CKADKMERAHAMIESMVDKG-VTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPN 327

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           VVT+N+I     ++  + +A ++ +++ +  + P+  T  I+I+G CK G  ++A     
Sbjct: 328 VVTFNSIIDGLCKSDRSGEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFE 387

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M    + P+++ F  LI G  +    +   ++L LM    V P+V+TY+ +++    +G
Sbjct: 388 EMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSG 447

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +++  E  ++M  +G  P++  Y  L     R    + A +L+  +   G+ P+ V + 
Sbjct: 448 RIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYN 507

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            ++ G    G  ++AI V ++M   G  P+  TF     G   +       E+L+++ A 
Sbjct: 508 ILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAK 567

Query: 488 GVHPQKST 495
           G+ P  +T
Sbjct: 568 GMLPDATT 575



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 205/429 (47%), Gaps = 7/429 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++SL + G  +EA+ +   +   G  P++VTY+ L+  L    R +    ++ 
Sbjct: 116 VVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRIDEARELIQ 175

Query: 132 QVEENGMD--PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL--TPTTSTYNTLIKGY 187
           ++     D  P+ I +N+ ++   +     EA +    +++  L  +P T T++TLI G 
Sbjct: 176 EMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGL 235

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G+ +E+    D M   G V PN+ TYN LV   C    +  A  ++  M   G+ PD
Sbjct: 236 CKCGQTDEACN--DDMIAGGYV-PNVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPD 292

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           V+TY+ +  A+ +    D+A E++  M   G  PN  T   II G CK  +  EA + A 
Sbjct: 293 VITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIAL 352

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            +    + P+ V FN+LI G  +  + +    +   M    + PDV+T+  +++    AG
Sbjct: 353 QVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAG 412

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            ++  ++I D MG  G+ P+   Y++L  G  +    E+  E L  M+ SG  P  + + 
Sbjct: 413 QVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYG 472

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +++   C     D A+++  K+   G  P+  T+  L+ G  ++ +  +A  +L+ M   
Sbjct: 473 SLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGK 532

Query: 488 GVHPQKSTF 496
           G  P   TF
Sbjct: 533 GHQPDSFTF 541



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 190/386 (49%), Gaps = 19/386 (4%)

Query: 60  CSFCMNKESCRTVRSM--------------TKLMNSLIERGKPQEAQAIFNNLIEGGHKP 105
           C   M  E+C  +RS+              + L++ L + G+  EA    +++I GG+ P
Sbjct: 199 CKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEA--CNDDMIAGGYVP 256

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
           ++VTY  L+  L    +    H+++  + + G+ PD I ++ +++AF ++  ++EA++  
Sbjct: 257 NVVTYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELL 316

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL-LDLMSREGNVKPNLRTYNVLVRAWC 224
             M   G TP   T+N++I G   + +  E+ ++ L + +R   + P+  T+N+L+   C
Sbjct: 317 HGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIALQVYNRM--LVPDKVTFNILIAGAC 374

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
              N  +A  +  +M A  M+PDV+T+  +     + G+ + A +++  M + GV PN  
Sbjct: 375 KAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVV 434

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T  +++ G CK G+I+E   F   M   G  P  + +  L+         D   ++++ +
Sbjct: 435 TYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKL 494

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
           K F  +PD +TY+ +++    +G  ++   + ++M   G +PD+  ++    G  R    
Sbjct: 495 KSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNL 554

Query: 405 EKAEELLMTMIESGFHPNVVIFTTII 430
               ELL  ++  G  P+    ++I+
Sbjct: 555 AGTMELLRVVLAKGMLPDATTCSSIL 580



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 80/290 (27%), Positives = 138/290 (47%), Gaps = 1/290 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+++  +  +  EA  + + +   G  P++VT+ +++  L    R      I  
Sbjct: 293 VITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQIAL 352

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           QV    + PD + FN +I    ++GN E+A   F +M    + P   T+  LI G   AG
Sbjct: 353 QVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALIDGLCKAG 412

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E +  +LDLM   G V PN+ TYNVLV   C    I E    + +M +SG  P+ +TY
Sbjct: 413 QVEAARDILDLMGNLG-VPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCVPESMTY 471

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++  A  +    D A +++ +++  G  P+  T  I++ G  K GK ++A+     M  
Sbjct: 472 GSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMVG 531

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
            G  P+   F     G     +  G  E+L ++    + PD  T S+I++
Sbjct: 532 KGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  202 bits (515), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 213/444 (47%), Gaps = 3/444 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+    + G   +A  +F  +      P  V+Y T++  L   KR      +  
Sbjct: 129 VYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFK 188

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++     P+S+ F+A+I+ F ++G++EE      +M++ GL      Y+ LI G+   G
Sbjct: 189 EMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKG 248

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E   +L + M R+ NV PN+ TY+ L+ A C ++   EA  ++  M    ++PDVV Y
Sbjct: 249 DIERGKELFNEMLRK-NVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAY 307

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +A   ++NG A  A +V+  M   G +PN  T   II+G CKEG++ +AL    TM +
Sbjct: 308 TVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAK 367

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM--KEFRVNPDVITYSTIMNAWSTAGFM 369
            G  P++V ++ L+KG   +   D   ++L L+  KEF + PDV  ++ ++        +
Sbjct: 368 KGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRL 427

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
              K ++  M + G   +   Y+IL  GY+   +  KA EL    ++SG  PN   +T +
Sbjct: 428 RHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVL 487

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I+G C    +  A  +F+K    G  P +  + TLM          +A  + Q M+    
Sbjct: 488 INGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANH 547

Query: 490 HPQKSTFLLLAEARRATGLTKEAK 513
            P   +F ++ +     G  + AK
Sbjct: 548 DPDVVSFNIIIDGTLKAGDVESAK 571



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/468 (26%), Positives = 218/468 (46%), Gaps = 15/468 (3%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P   + + L+ +    ++ +    ++  + + G   +   FN ++  F +SG+  +AMD 
Sbjct: 92  PCFTSLSALIESFVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDL 151

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F  MK + L P   +YNT+I G     +  E+ +L   M + G  KPN  T++ L+  +C
Sbjct: 152 FCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEM-KGGECKPNSVTFSALIDGFC 210

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
              ++ E + ++ +M   G++ DV  Y+ + + +   G+ ++ +E+  EM    V PN  
Sbjct: 211 KNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVV 270

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T   +++  CK+ K KEA +   TM    V P++V + +L  G  +        +VL LM
Sbjct: 271 TYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLM 330

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            +    P+ +TY+ I+N     G +D    I + M K G KPD   YS L KG     + 
Sbjct: 331 VKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKI 390

Query: 405 EKAEELLMTMIESGFH--PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           ++A +LL  ++   FH  P+V  F  +I   C    +  A  V+  M E G   N+ T+ 
Sbjct: 391 DEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYN 450

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            L+ GY  A +  +A E+ +     G+ P  +T+ +L        +   AK + +K K  
Sbjct: 451 ILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNK-KRA 509

Query: 523 ERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQ-------IPNVVS 563
             T    +E +  + SL R    E++     NL Q        P+VVS
Sbjct: 510 SGTRPTVSEYNTLMASLCR----ESSVEQARNLFQEMRNANHDPDVVS 553



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/460 (25%), Positives = 224/460 (48%), Gaps = 25/460 (5%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + LMN+L ++ K +EA  + + +     +P +V YT L   L+   R +    ++ 
Sbjct: 269 VVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLD 328

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G +P+++ +NA+IN   + G +++A+     M + G  P   TY+TL+KG    G
Sbjct: 329 LMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVG 388

Query: 192 KPEESVKLLDL-MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           K +E+V LL+L MS+E ++KP++  +N++++  C ++ +  A  V + M   G   ++VT
Sbjct: 389 KIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVT 448

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +   Y   G+  +A E+  +   +G+ PN  T  ++I+G CK   +  A       +
Sbjct: 449 YNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKR 508

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
             G  P +  +N L+           V++   L +E R    +PDV++++ I++    AG
Sbjct: 509 ASGTRPTVSEYNTLMASLCR---ESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAG 565

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            ++  KE+  +M    + PD   +SIL   +++  + ++A  L   M+  G  P+ V+F 
Sbjct: 566 DVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFD 625

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ----- 482
           +++ G+   G  ++ + +  +M +  V  + K   T++       +    E+IL      
Sbjct: 626 SLLKGYSLKGKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDIEKILPKFSQH 685

Query: 483 ------------IMKAFGVHPQKSTFLLLAEARRATGLTK 510
                       +MK   VHP  +  +L+A     TG  K
Sbjct: 686 TSVGASIKCNELLMKLNKVHPDNAN-ILVANTAMGTGKVK 724



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 95/372 (25%), Positives = 183/372 (49%), Gaps = 3/372 (0%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +I+   ++ + +  +    KM    + P  ++ + LI+ +    KP  +  +L L+ +
Sbjct: 63  NTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFGVLGLIMK 122

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G    N+  +N+L++ +C   +  +A ++   M  + + PD V+YNT+     +     
Sbjct: 123 RG-FHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLV 181

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A+E+  EM+    +PN  T   +I G+CK G ++E       M++ G+  ++ +++ LI
Sbjct: 182 EAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALI 241

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF    D +   E+   M    V P+V+TYS +MNA        +  ++ D M    ++
Sbjct: 242 SGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVR 301

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD  AY++LA G  +      A ++L  M++ G  PN V +  II+G C +G +D A+ +
Sbjct: 302 PDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGI 361

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM--KAFGVHPQKSTFLLLAEAR 503
            + M + G  P++ T+ TL+ G     +   A ++L ++  K F + P    F L+ +  
Sbjct: 362 LETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQEL 421

Query: 504 RATGLTKEAKRI 515
                 + AKR+
Sbjct: 422 CKQRRLRHAKRV 433



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 172/349 (49%), Gaps = 1/349 (0%)

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P+ S+ NTLI     A   +  + +   M+   +V P   + + L+ ++ N +  + A+ 
Sbjct: 57  PSYSSCNTLIDNLRKAKHYDHVISVHSKMASV-SVFPCFTSLSALIESFVNTQKPSFAFG 115

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           V+  +   G   +V  +N +   + Q+G++ +A ++   M+ N + P+  +   +I+G C
Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLC 175

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           K  ++ EA    + MK     PN V F+ LI GF +  D +    +L  M++  +  DV 
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVF 235

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
            YS +++ + + G +++ KE+F++M +  + P+   YS L     ++Q+ ++A ++L TM
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
                 P+VV +T +  G   +G    AI+V D M + G  PN  T+  ++ G  +  + 
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRV 355

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
             A  IL+ M   G  P   T+  L +     G   EA  +L+ + +KE
Sbjct: 356 DDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKE 404



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 47/223 (21%), Positives = 91/223 (40%), Gaps = 1/223 (0%)

Query: 304 RFARTMKEY-GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
            F  T+++Y    P+    N LI    +    D V  V + M    V P   + S ++ +
Sbjct: 44  HFHHTLQDYPNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIES 103

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +           +   + K G   + + +++L KG+ +  +  KA +L   M  +   P+
Sbjct: 104 FVNTQKPSFAFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPD 163

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            V + T+I+G C    +  A E+F +M      PN  TF  L+ G+ +         +L+
Sbjct: 164 CVSYNTVINGLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLE 223

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
            M+  G+      +  L     + G  +  K + +++  K  T
Sbjct: 224 EMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEMLRKNVT 266


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 215/438 (49%), Gaps = 4/438 (0%)

Query: 76  TKLMNSLIE-RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           TKL+      R  P+  + +   ++E   +P +  Y  L+       R +    ++ ++ 
Sbjct: 128 TKLIKGFFTLRNIPKAVRVM--EILEKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMR 185

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
                PD++ +N +I +    G ++ A+    ++      PT  TY  LI+   + G  +
Sbjct: 186 SKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVD 245

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           E++KL+D M   G +KP++ TYN ++R  C E  +  A+ ++  +   G +PDV++YN +
Sbjct: 246 EALKLMDEMLSRG-LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNIL 304

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             A    G+ ++ E+++ +M      PN  T  I+I+  C++GKI+EA+   + MKE G+
Sbjct: 305 LRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGL 364

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P+   ++ LI  F      D   E L  M      PD++ Y+T++      G  D+  E
Sbjct: 365 TPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALE 424

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           IF  +G+ G  P++ +Y+ +        +  +A  +++ M+ +G  P+ + + ++IS  C
Sbjct: 425 IFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLC 484

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +G +D A E+   M      P++ T+  ++ G+ +A +   A  +L+ M   G  P ++
Sbjct: 485 REGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNET 544

Query: 495 TFLLLAEARRATGLTKEA 512
           T+ +L E     G   EA
Sbjct: 545 TYTVLIEGIGFAGYRAEA 562



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 206/399 (51%), Gaps = 3/399 (0%)

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           S+H + + V + G +PD I    +I  F    N+ +A+     +++ G  P    YN LI
Sbjct: 108 SLHLLETMVRK-GYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAYNALI 165

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G+    + +++ ++LD M R  +  P+  TYN+++ + C+   +  A  V++++ +   
Sbjct: 166 NGFCKMNRIDDATRVLDRM-RSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNC 224

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           +P V+TY  +  A    G  D+A +++ EM   G++P+  T   II G CKEG +  A  
Sbjct: 225 QPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFE 284

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
             R ++  G  P+++ +N+L++  +     +  ++++  M   + +P+V+TYS ++    
Sbjct: 285 MVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLC 344

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G +++   +   M + G+ PDA++Y  L   + RE   + A E L TMI  G  P++V
Sbjct: 345 RDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIV 404

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            + T+++  C +G  D+A+E+F K+ E G SPN  ++ T+      +    RA  ++  M
Sbjct: 405 NYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEM 464

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            + G+ P + T+  +       G+  EA  +L  +++ E
Sbjct: 465 MSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 182/393 (46%), Gaps = 7/393 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ SL  RGK   A  + N L+    +P+++TYT L+ A  ++   +    +M ++   G
Sbjct: 199 MIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRG 258

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N +I    + G ++ A +    ++  G  P   +YN L++     GK EE  
Sbjct: 259 LKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGE 318

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL+  M  E    PN+ TY++L+   C +  I EA N++  M   G+ PD  +Y+ +  A
Sbjct: 319 KLMTKMFSE-KCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAA 377

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G  D A E +  M  +G  P+      +++  CK GK  +AL     + E G  PN
Sbjct: 378 FCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPN 437

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +N +        D+     ++  M    ++PD ITY+++++     G +D+  E+  
Sbjct: 438 SSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLV 497

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM      P    Y+I+  G+ +    E A  +L +M+ +G  PN   +T +I G    G
Sbjct: 498 DMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAG 557

Query: 438 SMDRAIEV------FDKMCEHGVSPNLKTFETL 464
               A+E+       D + E+      +TF  L
Sbjct: 558 YRAEAMELANDLVRIDAISEYSFKRLHRTFPLL 590



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 161/336 (47%), Gaps = 10/336 (2%)

Query: 67  ESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           ++C+ TV + T L+ + +  G   EA  + + ++  G KP + TY T++  +  +   + 
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              ++  +E  G +PD I +N ++ A    G  EE      KM      P   TY+ LI 
Sbjct: 282 AFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILIT 341

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
                GK EE++ LL LM  +G + P+  +Y+ L+ A+C E  +  A   +  M + G  
Sbjct: 342 TLCRDGKIEEAMNLLKLMKEKG-LTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PD+V YNT+     +NG+ADQA E+  ++   G  PN  +   + S     G    AL  
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHM 460

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMN 361
              M   G+ P+ + +N +I        R+G VDE   L+ + R    +P V+TY+ ++ 
Sbjct: 461 ILEMMSNGIDPDEITYNSMISCLC----REGMVDEAFELLVDMRSCEFHPSVVTYNIVLL 516

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            +  A  ++    + + M   G +P+   Y++L +G
Sbjct: 517 GFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 112/226 (49%), Gaps = 1/226 (0%)

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           C+ G   E+L    TM   G +P++++   LIKGF  + +      V+ ++++F   PDV
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDV 158

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
             Y+ ++N +     +D    + D M      PD   Y+I+        + + A ++L  
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           ++     P V+ +T +I     +G +D A+++ D+M   G+ P++ T+ T++ G  +   
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             RA E+++ ++  G  P   ++ +L  A    G  +E +++++K+
Sbjct: 279 VDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKM 324



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 45/189 (23%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIMSQVEEN 136
           ++ +L + GK  +A  IF  L E G  P+  +Y T+ +AL +   +  ++H I+ ++  N
Sbjct: 409 VLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMIL-EMMSN 467

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE-------------------------- 170
           G+DPD I +N++I+     G ++EA +    M+                           
Sbjct: 468 GIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDA 527

Query: 171 ---------SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR-----EGNVKPNLRTY 216
                    +G  P  +TY  LI+G G AG   E+++L + + R     E + K   RT+
Sbjct: 528 INVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVRIDAISEYSFKRLHRTF 587

Query: 217 ---NVLVRA 222
              NVL R+
Sbjct: 588 PLLNVLQRS 596


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 129/502 (25%), Positives = 241/502 (48%), Gaps = 54/502 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L + GK  EA  +   +I+ G    +VTY+TL+  L ++ R +    +  
Sbjct: 191 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFM 250

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNM--------------------------------- 158
            +++ G  PD+I +  ++    ++GN+                                 
Sbjct: 251 SMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIID 310

Query: 159 --------EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
                   +EA + F +MK  G+ P   +Y TLI G+ ++GK E++  L + M   G ++
Sbjct: 311 GLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG-IQ 369

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P++ T +VL+   C +  + EA  ++  +   G  PDVVT  T+           +A ++
Sbjct: 370 PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQL 429

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM----KEYGVH--PNLVIFNLL 324
            ++M+  G  PN  TC  ++ G C+ G IK AL   + M      YG++  PN + ++++
Sbjct: 430 FLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSII 489

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G  +    D   E+   MK   V PDVI+Y+++++ +  +G     K +F++M   G+
Sbjct: 490 IDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV 549

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           +PD   +S+L     +E +  +A ELL  MI+ G  PN V +TT++ G C +  +  A +
Sbjct: 550 QPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQ 609

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA----FGVH--PQKSTFLL 498
           +F KM + G  P++ T+ TLM G  +      A E+ + M +    +G +  P   ++ +
Sbjct: 610 LFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSI 669

Query: 499 LAEARRATGLTKEAKRILSKIK 520
           + +     G   EA+ +  ++K
Sbjct: 670 IIDGLCKHGREDEARELFKEMK 691



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/429 (28%), Positives = 213/429 (49%), Gaps = 19/429 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T L++     GK ++A+ +FN +++ G +P + T + L+  L  + +    + ++ 
Sbjct: 337 VISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLE 396

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            V + G  PD +    ++        + +A   F KM++ G  P   T  TL+KG   +G
Sbjct: 397 VVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSG 456

Query: 192 KPEESVKLLDLMSREG-----NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
             + +++L   M  +      N KPN  +Y++++   C      EA  +  +M A G+ P
Sbjct: 457 NIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIP 516

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           DV++Y ++   + ++G+   A+ +  EM   GVQP+  T  ++I   CKEGK+ EA    
Sbjct: 517 DVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELL 576

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAW 363
             M + G  PN V +  L+KG       D + E   L   M++    PDV+TY T+M   
Sbjct: 577 EVMIQRGCIPNTVTYTTLVKGLCM---NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGL 633

Query: 364 STAG----FMDKCKEIFDDMGKAG--IKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
              G     ++  K++  D G+ G   KPD  +YSI+  G  +    ++A EL   M   
Sbjct: 634 CQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKAL 693

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  PNV+ +T++I G+C  G ++ A  +F++M + GV  N  T+  ++ G+ +  Q  +A
Sbjct: 694 GVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 753

Query: 478 EEILQIMKA 486
             + Q M+A
Sbjct: 754 --LFQKMEA 760



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 120/496 (24%), Positives = 234/496 (47%), Gaps = 54/496 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   + GK  EA  +   +++ G    +VTY+TL+  L ++ R +    +   +++ G
Sbjct: 16  LIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 75

Query: 138 MDPDSIFFNAVINAFSESGNM--------------------------------------- 158
             PD+I +  ++    ++G +                                       
Sbjct: 76  CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDGLCKDR 135

Query: 159 --EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
             +EA + F +MK  G+ P   +Y +LI G+  +GK E++  L + M   G ++ ++ T 
Sbjct: 136 REDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVG-IRSDVTTS 194

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           ++L+   C E  + EA  ++  M   G   D+VTY+T+           +A  + + M+ 
Sbjct: 195 SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATRLFMSMQK 254

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTM----KEYGV--HPNLVIFNLLIKGFVE 330
            G +P+    G ++ G C+ G I  AL+  + M      YG+   P L+ ++++I G  +
Sbjct: 255 LGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 314

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
               D   E+   MK   + PDVI+Y+T+++ +  +G  +K K +F++M   GI+PD   
Sbjct: 315 DRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 374

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
            S+L     ++ +  +A +LL  +I+ G  P+VV  TT++ G C    + +A ++F KM 
Sbjct: 375 SSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQ 434

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA----FGVH--PQKSTFLLLAEARR 504
           + G  PN+ T  TLM G  ++     A E+ + M +    +G++  P   ++ ++ +   
Sbjct: 435 KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLC 494

Query: 505 ATGLTKEAKRILSKIK 520
             G   EA+ +  ++K
Sbjct: 495 KCGREDEARELFKEMK 510



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/475 (26%), Positives = 229/475 (48%), Gaps = 20/475 (4%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEA----QAIFNNLIEGG--HKPSLVTYTTLLAA 116
           M K  CR    +   LM  L + GK   A    Q + N+  + G   KP+LV+Y+ ++  
Sbjct: 71  MKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSIIIDG 130

Query: 117 LTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPT 176
           L   +R +    +  +++  GM PD I + ++I+ F  SG  E+A   F +M + G+   
Sbjct: 131 LCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGIRSD 190

Query: 177 TSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
            +T + LI      GK  E+ +LL++M + G +  ++ TY+ L++  C +  I+EA  + 
Sbjct: 191 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCI-LDIVTYSTLIKGLCMKHRISEATRLF 249

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN----GV--QPNGRTCGIII 290
             M   G +PD + Y T+     Q G  + A ++  EM ++    G+  +P   +  III
Sbjct: 250 MSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSIII 309

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
            G CK+ +  EA    + MK  G+ P+++ +  LI GF      +    +   M +  + 
Sbjct: 310 DGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQ 369

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           PDV T S +++     G + +  ++ + + + G  PD    + L KG   +    KA +L
Sbjct: 370 PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKATQL 429

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE----HGVS--PNLKTFETL 464
            + M + G  PNVV   T++ G C  G++  A+E+   M      +G++  PN  ++  +
Sbjct: 430 FLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSII 489

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           + G  +  +   A E+ + MKA GV P   ++  L      +G  K+AK + +++
Sbjct: 490 IDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEM 544



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 201/416 (48%), Gaps = 11/416 (2%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           ++  G +P + T   L+     + +    + ++  + + G   D + ++ +I        
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL----LDLMSREG-NVKPN 212
           + EA   F  MK+ G  P    Y TL+KG    GK   ++ L    L+  S+ G   KP 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
           L +Y++++   C ++   EA  +  +M A GM PDV++Y ++   + ++G+ ++A+ +  
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           EM   G++ +  T  ++I   CKEGK+ EA      M + G   ++V ++ LIKG     
Sbjct: 181 EMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKH 240

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC----KEIFDDMGKAGI--KP 386
                  +   M++    PD I Y T+M      G ++      +E+ +D G+ GI  KP
Sbjct: 241 RISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKP 300

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
              +YSI+  G  +++  ++A EL   M   G  P+V+ +TT+I G+C  G  ++A  +F
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           ++M + G+ P++ T   L+    +  +   A ++L+++   G  P   T   L + 
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKG 416



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/442 (25%), Positives = 212/442 (47%), Gaps = 21/442 (4%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ S + +++ L +  +  EA+ +F  +   G  P +++YTTL+    +  ++     + 
Sbjct: 301 TLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 360

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++ + G+ PD    + +I+   + G + EA      + + G  P   T  TL+KG  + 
Sbjct: 361 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMK 420

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS------GM 244
            +  ++ +L   M + G + PN+ T   L++  C   NI  A  +   M +         
Sbjct: 421 HRISKATQLFLKMQKLGCM-PNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 479

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           KP+ ++Y+ I     + G  D+A E+  EM+  GV P+  +   +I G+C+ GK K+A  
Sbjct: 480 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 539

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG----VDEVLALMKEFRVNPDVITYSTIM 360
               M + GV P++  F++LI    +++ ++G     +E+L +M +    P+ +TY+T++
Sbjct: 540 LFNEMVDIGVQPDVTTFSVLI----DMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 595

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE---- 416
                   + +  ++F  M K G  PD   Y  L KG  +    + A EL   M+     
Sbjct: 596 KGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 655

Query: 417 --SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
             + F P+V+ ++ II G C  G  D A E+F +M   GV PN+ ++ +L+ G+  + + 
Sbjct: 656 YGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKL 715

Query: 475 WRAEEILQIMKAFGVHPQKSTF 496
             A+ +   M   GV     T+
Sbjct: 716 EDAKHLFNEMVDQGVQLNAVTY 737



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 170/344 (49%), Gaps = 12/344 (3%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           ++P++ T  VL+  +C E  + EA  ++  M   G   D+VTY+T+           +A 
Sbjct: 6   IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEAT 65

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM----KEYGVH--PNLVIFN 322
           ++ + M+  G +P+    G ++ G C+ GKI  AL   + M     +YG+   P LV ++
Sbjct: 66  QLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYS 125

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           ++I G  +    D   E+   MK   + PDVI+Y+++++ +  +G  +K K +F++M   
Sbjct: 126 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDV 185

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           GI+ D    S+L     +E +  +A ELL  MI+ G   ++V ++T+I G C    +  A
Sbjct: 186 GIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEA 245

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ-IMKAFGVHPQKSTFLLLAE 501
             +F  M + G  P+   + TLM G  +      A ++ Q ++   G +  K    L++ 
Sbjct: 246 TRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISY 305

Query: 502 ARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP-VESLERLYH 544
           +    GL K+ +    + + +E   EM+A+  +P V S   L H
Sbjct: 306 SIIIDGLCKDRR----EDEARELFKEMKAQGIMPDVISYTTLIH 345



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/278 (24%), Positives = 127/278 (45%), Gaps = 12/278 (4%)

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M   G++PDV T   +   + + G+  +A E++  M   G   +  T   +I G C + +
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE---------FRV 349
           I EA +   +MK+ G  P+ + +  L+KG  +      ++  L L +E          + 
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQ---TGKINIALHLHQEMLNDTSQYGIKC 117

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            P +++YS I++        D+ +E+F +M   G+ PD  +Y+ L  G+ R  + EKA+ 
Sbjct: 118 KPTLVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKC 177

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L   M++ G   +V   + +I   C +G +  A E+ + M + G   ++ T+ TL+ G  
Sbjct: 178 LFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLC 237

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
              +   A  +   M+  G  P    +  L +    TG
Sbjct: 238 MKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTG 275


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/465 (28%), Positives = 227/465 (48%), Gaps = 40/465 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI-HSI 129
           TV +   LM+      +P    A+F   ++ G K  ++  + LL  L   KR + + + +
Sbjct: 118 TVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNLL 177

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM--KESGLTPTTSTYNTLIKGY 187
           + ++ E G++PD+I +N V+    E    + A+D    M  K  G +P   TYNT+I G 
Sbjct: 178 LHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGL 237

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G+  ++  L   M ++G V P++ TY  ++ A C  + + +A  V+ +M ++G +P+
Sbjct: 238 FREGEVSKACNLFHEMMQQG-VVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
            VTYN +   Y+ +G+  +   +  EM   G+ PN  TC   +S  CK GK KEA  F  
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 308 TMKEYGVHPNLVIFNLLIKG------FVEIMD--------------------------RD 335
           +M   G  PNLV +++L+ G      FV++++                          R 
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416

Query: 336 GVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
            +DE + +   M+E  V PD  TY  ++ A+S  G +    + F+ M   G+KP+   Y 
Sbjct: 417 MMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYH 476

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGF-HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
            L +G+       KA+EL+  M+  G   PN+V F +II+  C +G +  A ++FD +  
Sbjct: 477 SLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIH 536

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            G  P++ TF +L+ GY    +  +A  +L  M + G+ P   ++
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSY 581



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 110/403 (27%), Positives = 214/403 (53%), Gaps = 3/403 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++ L   G+  +A  +F+ +++ G  P +VTYT+++ AL   +  +    ++ 
Sbjct: 227 VVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLR 286

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+  NG  P+ + +N +I+ +S SG  +E    F +M   GL P   T N+ +      G
Sbjct: 287 QMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHG 346

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E+ +  D M+ +G+ KPNL TY+VL+  +  E    +  N+ + M  +G+  D   +
Sbjct: 347 KSKEAAEFFDSMAAKGH-KPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVF 405

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  AY + G  D+   +  +M+  GV P+  T GI+I+ + + G++ +A+     M  
Sbjct: 406 NIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIA 465

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA-LMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            G+ P  ++++ LI+GF    +     E+++ +M      P+++ +++I+N+    G + 
Sbjct: 466 MGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVV 525

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  +IFD +   G +PD   ++ L  GY    + EKA  +L  MI +G  P+VV + T+I
Sbjct: 526 EAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLI 585

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG-YSEAR 472
            G+C +G +D  + +F +M   GV P   T+  ++ G +++ R
Sbjct: 586 DGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGR 628



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 212/444 (47%), Gaps = 45/444 (10%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           M+SL + GK +EA   F+++   GHKP+LVTY+ LL     +  F  + ++ + +E NG+
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGI 398

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
             D   FN VI+A+ + G M+E M  F +M+E G+ P   TY  +I  +   G+  +++ 
Sbjct: 399 VADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMD 458

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM-KPDVVTYNTIATA 257
             + M   G +KP    Y+ L++ +C   N+ +A  ++ +M + G+ +P++V +N+I  +
Sbjct: 459 KFNQMIAMG-LKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINS 517

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G   +A ++   + H G +P+  T   +I GY   GKI++A      M   G+ P+
Sbjct: 518 LCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPD 577

Query: 318 LVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCK 373
           +V +N LI G+     R+G +D+ L L  E     V P  ITY  I++            
Sbjct: 578 VVSYNTLIDGYC----RNGRIDDGLILFGEMLSKGVKPTTITYGIILHG----------- 622

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F+D    G K   H                        MIESG   ++     I+ G 
Sbjct: 623 -LFNDGRTVGAKKMCH-----------------------EMIESGTTMDISTCGIILGGL 658

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C +   D AI +F K+    V  N+    T++    + R+   A+E+   + A G+ P  
Sbjct: 659 CRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLVPNA 718

Query: 494 STFLLLAEARRATGLTKEAKRILS 517
           ST+ ++ +     G  +EA  + S
Sbjct: 719 STYGVMIKNLLKEGSVEEADNMFS 742



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 149/337 (44%), Gaps = 7/337 (2%)

Query: 193 PEESVKLLDLMSREGN----VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
           P  +V L + + RE        P + TYN+L+   C  +  T  + +  +   +G+K DV
Sbjct: 95  PSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDV 154

Query: 249 VTYNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           +  + +         +D    +++  M   GV+P+  +   ++   C++ + + AL    
Sbjct: 155 IVASILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLH 214

Query: 308 TM--KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
           TM  K  G  PN+V +N +I G     +      +   M +  V PDV+TY++I++A   
Sbjct: 215 TMVKKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCK 274

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
           A  MDK + +   M   G +P+   Y+ +  GY    + ++   +   M   G  PN+V 
Sbjct: 275 ARAMDKAELVLRQMISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVT 334

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
             + +S  C  G    A E FD M   G  PNL T+  L+ GY+          +   M+
Sbjct: 335 CNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSME 394

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             G+   +  F ++ +A    G+  E   I ++++ +
Sbjct: 395 GNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQ 431



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/234 (23%), Positives = 101/234 (43%), Gaps = 1/234 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L++     G+  +   +F  ++  G KP+ +TY  +L  L    R      +  
Sbjct: 578 VVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCH 637

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E+G   D      ++     +   +EA+  F K+    +    +  NT+I       
Sbjct: 638 EMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVR 697

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K EE+ +L D +S  G V PN  TY V+++    E ++ EA N+   M  SG  P     
Sbjct: 698 KREEAKELFDSISATGLV-PNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLL 756

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           N I     + GE  +A   + +++   +     T  ++++ + +EGK  E ++ 
Sbjct: 757 NYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKL 810



 Score = 46.6 bits (109), Expect = 0.045,   Method: Compositional matrix adjust.
 Identities = 30/123 (24%), Positives = 62/123 (50%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++++ +  K +EA+ +F+++   G  P+  TY  ++  L  +       ++ S +E++G
Sbjct: 689 MIDAMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSG 748

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P S   N +I    E G + +A +  +K+    ++   ST + L+  +   GK  E V
Sbjct: 749 CAPSSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDV 808

Query: 198 KLL 200
           KLL
Sbjct: 809 KLL 811


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 131/471 (27%), Positives = 231/471 (49%), Gaps = 40/471 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSI 129
           TV +   LM+      +P    A+F   ++ G K  ++    LL  L   KR + +++ +
Sbjct: 118 TVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNVL 177

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM--KESGLTPTTSTYNTLIKGY 187
           + ++ E G++PD+I ++ V+ +  E    + A+D    M  K  G +P   +YNT+I G+
Sbjct: 178 LHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGF 237

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G+  ++  L   M ++G V P++ TY+  + A C  + + +A  V+ +M ++G +PD
Sbjct: 238 FREGEVSKACNLFHEMMQQG-VVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPD 296

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
            VTYN +   Y+  G+  +   +  EM   G+ P+  TC   +S  CK GK KEA  F  
Sbjct: 297 KVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 308 TMKEYGVHPNLVIFNLLIKGF------VEIMD--------------------------RD 335
           +M   G  P+LV +++L+ G+      V++++                          R 
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416

Query: 336 GVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
            +DE + +   M+E  V PD  TY T++ A+S  G +    + F+ M   G+KPD   Y+
Sbjct: 417 MMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYN 476

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGF-HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
            L +G+       KA+EL+  M+  G   PN V F +II+  C +G +  A ++FD +  
Sbjct: 477 SLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIH 536

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            G  P++ TF +L+ GY    +  +A  +L  M + G+ P   T+  L + 
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDG 587



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 213/403 (52%), Gaps = 3/403 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   +++     G+  +A  +F+ +++ G  P +VTY++ + AL   +  +    ++ 
Sbjct: 227 VVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLR 286

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+  NG +PD + +N +I+ +S  G  +E    F +M   GL P   T N+ +      G
Sbjct: 287 QMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHG 346

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E+ +  D M+ +G+ KP+L TY+VL+  +  E  + +  N+ + M  +G+  D   Y
Sbjct: 347 KSKEAAEFFDSMAAKGH-KPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVY 405

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  AY + G  D+A  +  +M+  GV P+  T G +I+ + + G++ +A+     M  
Sbjct: 406 NILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIA 465

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA-LMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            G+ P+ +++N LI+GF    +     E+++ +M      P+ + +++I+N+    G + 
Sbjct: 466 MGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVV 525

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + ++IFD +   G +PD   ++ L  GY    + EKA  +L  MI  G  P+VV ++ ++
Sbjct: 526 EAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALL 585

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG-YSEAR 472
            G+C +G +D  + +F +M   GV P   T+  ++ G +++ R
Sbjct: 586 DGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGR 628



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 205/433 (47%), Gaps = 2/433 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+ +E   +F  +   G  P + T  + +++L    +          +   G  PD + +
Sbjct: 311 GQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTY 370

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           + +++ ++  G + + ++ F  M+ +G+    S YN LI  YG  G  +E++ +   M  
Sbjct: 371 SVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQE 430

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G V P+  TY  ++ A+     + +A +  ++M A G+KPD + YN++   +  +G   
Sbjct: 431 RG-VMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLV 489

Query: 266 QAEEVIVEMEHNGV-QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           +A+E+I EM   G+ +PN      II+  CKEG++ EA      +   G  P+++ FN L
Sbjct: 490 KAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSL 549

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G+  +   +    VL  M    + PDV+TYS +++ +   G +D    +F +M   G+
Sbjct: 550 IDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGV 609

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           KP    Y I+  G   +     A+++   MIESG   ++     I+ G C +   D AI 
Sbjct: 610 KPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIA 669

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           +F K+    V  N+    T++    + R+   A E+   + A G+ P  ST+ ++     
Sbjct: 670 LFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSISATGLVPNASTYGVMITNLL 729

Query: 505 ATGLTKEAKRILS 517
             G  +EA  + S
Sbjct: 730 KEGSVEEADNMFS 742



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 216/449 (48%), Gaps = 10/449 (2%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           M+SL + GK +EA   F+++   GHKP LVTY+ LL     +     + ++ + +E NG+
Sbjct: 339 MSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGI 398

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
             D   +N +I+A+ + G M+EAM  F +M+E G+ P   TY T+I  +   G+  +++ 
Sbjct: 399 VADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMD 458

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM-KPDVVTYNTIATA 257
             + M   G +KP+   YN L++ +C   N+ +A  ++ +M + G+ +P+ V +N+I  +
Sbjct: 459 KFNQMIAMG-LKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINS 517

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G   +A+++   + H G +P+  T   +I GY   GK+++A      M   G+ P+
Sbjct: 518 LCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPD 577

Query: 318 LVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCK 373
           +V ++ L+ G+     R+G +D+ L L +E     V P  ITY  I++     G     K
Sbjct: 578 VVTYSALLDGYC----RNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAK 633

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           ++  +M ++G   D     I+  G  R    ++A  L   +       N+ I  T+I   
Sbjct: 634 KMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAM 693

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
                 + A E+FD +   G+ PN  T+  ++    +      A+ +  +M+  G  P  
Sbjct: 694 YKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSS 753

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK 522
                +       G   +A   LSK+  K
Sbjct: 754 RLLNNIIRVLLEKGEISKAGNYLSKVDGK 782



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 195/445 (43%), Gaps = 42/445 (9%)

Query: 85  RGKPQEAQAIFNNLIEGGHKP-----SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           R  P  A A+FN +     +P     ++ TY  L+       R     ++  +  + G+ 
Sbjct: 92  RDGPSLAVALFNRICREEARPRVALPTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLK 151

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            D I  N ++     +   ++A++    +M E G+ P T +Y+T++K      + + ++ 
Sbjct: 152 TDVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALD 211

Query: 199 LLDLMSRE-GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           LL  M ++ G   PN+ +YN ++  +  E  +++A N+ H+M   G+ PDVVTY++   A
Sbjct: 212 LLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDA 271

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+AE V+ +M  NG +P+  T   +I GY   G+ KE     R M   G+ P 
Sbjct: 272 LCKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMP- 330

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
                                             D+ T ++ M++    G   +  E FD
Sbjct: 331 ----------------------------------DIFTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G KPD   YS+L  GY  E        L  +M  +G   +  ++  +I  +   G
Sbjct: 357 SMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRG 416

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            MD A+ +F +M E GV P+  T+ T++  +S   +   A +    M A G+ P    + 
Sbjct: 417 MMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYN 476

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L +     G   +AK ++S++ ++
Sbjct: 477 SLIQGFCMHGNLVKAKELISEMMSR 501



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 129/253 (50%), Gaps = 1/253 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++NSL + G+  EAQ IF+ +I  G +P ++T+ +L+    +  +      ++  +   G
Sbjct: 514 IINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVG 573

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++PD + ++A+++ +  +G +++ +  F +M   G+ PTT TY  ++ G    G+   + 
Sbjct: 574 IEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAK 633

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+   M   G    ++ T  +++   C      EA  +  K+ A  +K ++   NT+  A
Sbjct: 634 KMCHEMIESGTTM-DISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDA 692

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +  + ++A E+   +   G+ PN  T G++I+   KEG ++EA      M++ G  P+
Sbjct: 693 MYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPS 752

Query: 318 LVIFNLLIKGFVE 330
             + N +I+  +E
Sbjct: 753 SRLLNNIIRVLLE 765



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/241 (22%), Positives = 105/241 (43%), Gaps = 1/241 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++     G+  +   +F  ++  G KP+ +TY  +L  L    R      +  
Sbjct: 578 VVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCH 637

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E+G   D      ++     +   +EA+  F K+    +    +  NT+I       
Sbjct: 638 EMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVR 697

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K EE+ +L D +S  G V PN  TY V++     E ++ EA N+   M  SG  P     
Sbjct: 698 KREEANELFDSISATGLV-PNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSSRLL 756

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N I     + GE  +A   + +++   +     T  +++S + ++GK +E ++    M +
Sbjct: 757 NNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSLPAMYQ 816

Query: 312 Y 312
           +
Sbjct: 817 F 817


>gi|357141282|ref|XP_003572167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Brachypodium distachyon]
          Length = 686

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 212/437 (48%), Gaps = 2/437 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD-PDSIF 144
           G+  + +  F  L+    +P   T+   + A  +    +    ++ ++  +G   P++  
Sbjct: 131 GRHADVRGAFELLVAARARPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFS 190

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +N VI    ++G   +A+  F +M E  + P   TYNT+I G+   G  E   +L   M 
Sbjct: 191 YNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQML 250

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G +KPN+ TYNVL+   C    + E   V+ +MA+  M PD  TY+ +   +++ G++
Sbjct: 251 RHG-LKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDS 309

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
                +  E    GV+    TC I+++G CK+GKI +A    +T+   G+    VI+N L
Sbjct: 310 QTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTL 369

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G+ +I D +G   +   MK   + PD ITY+ ++N       + +  ++  +M K G+
Sbjct: 370 INGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGV 429

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P    ++ L   Y R  + EK   +L  M E G  PNVV + +I++ +C +G +  A+ 
Sbjct: 430 NPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAVA 489

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + D M    V P  + +  ++  Y E     +A  + + MK+ GV P   T+ LL +   
Sbjct: 490 ILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGLC 549

Query: 505 ATGLTKEAKRILSKIKN 521
                 EA+ +L  ++N
Sbjct: 550 KQSQISEAEELLDSLRN 566



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 100/448 (22%), Positives = 222/448 (49%), Gaps = 7/448 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++  I++G  +    +++ ++  G KP+++TY  LL+ L    R     +++ ++    
Sbjct: 229 MIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRK 288

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M PD   ++ + +  S +G+ +  +  F +  + G+     T + L+ G    GK  ++ 
Sbjct: 289 MVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAE 348

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L  +   G ++  +  YN L+  +C   ++  A+++  +M +  ++PD +TYN +   
Sbjct: 349 EVLQTLVNSGLLQTTV-IYNTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALING 407

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +     +A ++++EME NGV P+  T   +I  Y + G++++       M+E G+ PN
Sbjct: 408 LGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPN 467

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKE 374
           +V +  ++  F +      + E +A++ +  +    P    Y+ I++A+   G  D+   
Sbjct: 468 VVSYGSIVNAFCK---NGKILEAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFM 524

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + + M  +G+ P    Y++L KG  ++ +  +AEELL ++   G  P+V+ + T+IS  C
Sbjct: 525 LAEKMKSSGVPPSIVTYNLLIKGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACC 584

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
              + DRA+E+  +M + G+ P+ +T+  L      A +    E + Q M    V P   
Sbjct: 585 YRSNTDRALELEKEMWKCGIKPSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSG 644

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
            + ++ +A    G   + + +  ++ +K
Sbjct: 645 IYNIMVDAYAKCGEESKVEALRKEMSDK 672



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 214/450 (47%), Gaps = 1/450 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++  L + G   +A  +F+ + E    P+ +TY T++     +    S   + SQ+
Sbjct: 190 SYNVVIAGLWKAGTDCDAVKLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQM 249

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G+ P+ I +N +++    +G M E      +M    + P   TY+ L  G+   G  
Sbjct: 250 LRHGLKPNVITYNVLLSGLCRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDS 309

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +  + L +   ++G VK    T ++L+   C +  I++A  V+  +  SG+    V YNT
Sbjct: 310 QTMLSLFEESVKKG-VKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNT 368

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y Q G+ + A  +  +M+   ++P+  T   +I+G  K  +I EA      M++ G
Sbjct: 369 LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNG 428

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V+P++  FN LI  +      +    +L+ M+E  + P+V++Y +I+NA+   G + +  
Sbjct: 429 VNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAV 488

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            I DDM    + P A  Y+ +   Y+     ++A  L   M  SG  P++V +  +I G 
Sbjct: 489 AILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKGL 548

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C    +  A E+ D +  +G++P++ ++ TL+          RA E+ + M   G+ P  
Sbjct: 549 CKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPSP 608

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNKE 523
            T+ +L  +    G   E + +  ++ +K+
Sbjct: 609 RTYRMLFSSLGGAGRVHEMENLYQQMLDKD 638



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 179/370 (48%), Gaps = 1/370 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G  Q   ++F   ++ G K    T + LL  L    + +    ++  +  +G+   ++ +
Sbjct: 307 GDSQTMLSLFEESVKKGVKIGAYTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIY 366

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +IN + + G++E A   F +MK   + P   TYN LI G G   +  E+  L+  M +
Sbjct: 367 NTLINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEK 426

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G V P++ T+N L+ A+     + + + ++  M   G+KP+VV+Y +I  A+ +NG+  
Sbjct: 427 NG-VNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKIL 485

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  ++ +M    V P  +    II  Y + G   +A   A  MK  GV P++V +NLLI
Sbjct: 486 EAVAILDDMFIKDVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLI 545

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           KG  +       +E+L  ++ + + PDVI+Y+T+++A       D+  E+  +M K GIK
Sbjct: 546 KGLCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIK 605

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P    Y +L           + E L   M++    P   I+  ++  +   G   +   +
Sbjct: 606 PSPRTYRMLFSSLGGAGRVHEMENLYQQMLDKDVVPCSGIYNIMVDAYAKCGEESKVEAL 665

Query: 446 FDKMCEHGVS 455
             +M + G++
Sbjct: 666 RKEMSDKGIA 675



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 153/314 (48%), Gaps = 1/314 (0%)

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM-KPDVVTYNTIATAYAQNGEADQAE 268
           +P+  T+N  V+A     ++ EA  ++ +M   G   P+  +YN +     + G    A 
Sbjct: 149 RPDTFTWNKAVQACVVAGDLDEAVGMLRRMGCDGAPAPNAFSYNVVIAGLWKAGTDCDAV 208

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           ++  EM    V PN  T   +I G+ K+G ++   R    M  +G+ PN++ +N+L+ G 
Sbjct: 209 KLFDEMPEKAVVPNHITYNTMIDGHIKKGDLESGFRLWSQMLRHGLKPNVITYNVLLSGL 268

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
                      VL  M   ++ PD  TYS + +  S  G       +F++  K G+K  A
Sbjct: 269 CRAGRMGETAAVLDEMASRKMVPDGFTYSILFDGHSRTGDSQTMLSLFEESVKKGVKIGA 328

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
           +  SIL  G  ++ +  KAEE+L T++ SG     VI+ T+I+G+C  G ++ A  +F +
Sbjct: 329 YTCSILLNGLCKDGKISKAEEVLQTLVNSGLLQTTVIYNTLINGYCQIGDLEGAFSIFQQ 388

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M    + P+  T+  L+ G  +  +   A +++  M+  GV+P   TF  L +A    G 
Sbjct: 389 MKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNGVNPSVETFNTLIDAYGRAGQ 448

Query: 509 TKEAKRILSKIKNK 522
            ++   ILS ++ K
Sbjct: 449 LEKCFIILSDMQEK 462



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 155/311 (49%), Gaps = 9/311 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   + G  + A +IF  +     +P  +TY  L+  L   +R    H ++ ++E+NG
Sbjct: 369 LINGYCQIGDLEGAFSIFQQMKSRLIRPDHITYNALINGLGKVERITEAHDLVIEMEKNG 428

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++P    FN +I+A+  +G +E+       M+E GL P   +Y +++  +   GK  E+V
Sbjct: 429 VNPSVETFNTLIDAYGRAGQLEKCFIILSDMQEKGLKPNVVSYGSIVNAFCKNGKILEAV 488

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +LD M  + +V P  + YN ++ A+    +  +A+ +  KM +SG+ P +VTYN +   
Sbjct: 489 AILDDMFIK-DVLPGAQVYNAIIDAYIECGSTDQAFMLAEKMKSSGVPPSIVTYNLLIKG 547

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +  +  +AEE++  + + G+ P+  +   +IS  C       AL   + M + G+ P+
Sbjct: 548 LCKQSQISEAEELLDSLRNYGLAPDVISYNTLISACCYRSNTDRALELEKEMWKCGIKPS 607

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI----TYSTIMNAWSTAGFMDKCK 373
              + +L   F  +     V E+  L ++  ++ DV+     Y+ +++A++  G   K +
Sbjct: 608 PRTYRML---FSSLGGAGRVHEMENLYQQM-LDKDVVPCSGIYNIMVDAYAKCGEESKVE 663

Query: 374 EIFDDMGKAGI 384
            +  +M   GI
Sbjct: 664 ALRKEMSDKGI 674


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 211/415 (50%), Gaps = 1/415 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++    KL++++ +  K     ++   +   G   +L TY  L+     + + +   +++
Sbjct: 9   SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 68

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G +P  +  ++++N +     + +A+    +M E G  P T T+ TLI G  + 
Sbjct: 69  GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 128

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K  E+V L+D M + G  +PNL TY V+V   C   +I  A+N+++KM A+ ++ DVV 
Sbjct: 129 NKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +NTI  +  +    D A  +  EME  G++PN  T   +IS  C  G+  +A +    M 
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E  ++PNLV FN LI  FV+       +++   M +  ++PD+ TY++++N +     +D
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLD 307

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K K++F+ M      PD   Y+ L KG+ + +  E   EL   M   G   + V +TT+I
Sbjct: 308 KAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLI 367

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
            G   DG  D A +VF +M   GV P++ T+  L+ G     +  +A E+   M+
Sbjct: 368 QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQ 422



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 222/444 (50%), Gaps = 1/444 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++ L    K  EA A+ + +++ G +P+LVTY  ++  L  +   +   ++++++
Sbjct: 117 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 176

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E   ++ D + FN +I++  +  ++++A++ F +M+  G+ P   TY++LI      G+ 
Sbjct: 177 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 236

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ +LL  M  E  + PNL T+N L+ A+  E    EA  +   M    + PD+ TYN+
Sbjct: 237 SDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNS 295

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +  +   D+A+++   M      P+  T   +I G+CK  ++++     R M   G
Sbjct: 296 LINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRG 355

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           +  + V +  LI+G     D D   +V   M    V PD++TYS +++     G ++K  
Sbjct: 356 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 415

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+FD M K+ IK D + Y+ + +G  +  + +   +L  ++   G  PNVV + T+ISG 
Sbjct: 416 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           CS   +  A  +  KM E G  P+  T+ TL+  +        + E+++ M++       
Sbjct: 476 CSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 535

Query: 494 STFLLLAEARRATGLTKEAKRILS 517
           ST  L+A       L K    +LS
Sbjct: 536 STIGLVANMLHDGRLDKSFLDMLS 559



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 223/444 (50%), Gaps = 3/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N    R +   A A+   +++ G++PS+VT ++LL      KR +   +++ Q+ E G
Sbjct: 51  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 110

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD+I F  +I+         EA+    +M + G  P   TY  ++ G    G  + + 
Sbjct: 111 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 170

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ M     ++ ++  +N ++ + C  +++ +A N+  +M   G++P+VVTY+++ + 
Sbjct: 171 NLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 229

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G    A +++ +M    + PN  T   +I  + KEGK  EA +    M +  + P+
Sbjct: 230 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPD 289

Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +  +N LI GF  + DR D   ++   M      PD+ TY+T++  +  +  ++   E+F
Sbjct: 290 IFTYNSLINGFC-MHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELF 348

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M   G+  D   Y+ L +G   + + + A+++   M+  G  P+++ ++ ++ G C++
Sbjct: 349 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 408

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +++A+EVFD M +  +  ++  + T++ G  +A +     ++   +   GV P   T+
Sbjct: 409 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 468

Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
             +     +  L +EA  +L K+K
Sbjct: 469 NTMISGLCSKRLLQEAYALLKKMK 492



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 217/437 (49%), Gaps = 1/437 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +++ L+N      +  +A A+ + ++E G++P  +T+TTL+  L +  + +   +++
Sbjct: 79  SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 138

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G  P+ + +  V+N   + G+++ A +   KM+ + +      +NT+I      
Sbjct: 139 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKY 198

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              ++++ L   M  +G ++PN+ TY+ L+   C+    ++A  ++  M    + P++VT
Sbjct: 199 RHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 257

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +N +  A+ + G+  +AE++  +M    + P+  T   +I+G+C   ++ +A +    M 
Sbjct: 258 FNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                P+L  +N LIKGF +    +   E+   M    +  D +TY+T++      G  D
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             +++F  M   G+ PD   YSIL  G     + EKA E+   M +S    ++ I+TT+I
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C  G +D   ++F  +   GV PN+ T+ T++ G    R    A  +L+ MK  G  
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497

Query: 491 PQKSTFLLLAEARRATG 507
           P   T+  L  A    G
Sbjct: 498 PDSGTYNTLIRAHLRDG 514



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 205/419 (48%), Gaps = 1/419 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           PS+  +  LL+A+   K+F+ + S+  +++  G+  +   +N +IN F     +  A+  
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
             KM + G  P+  T ++L+ GY    +  ++V L+D M   G  +P+  T+  L+    
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG-YRPDTITFTTLIHGLF 126

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
                +EA  ++ +M   G +P++VTY  +     + G+ D A  ++ +ME   ++ +  
Sbjct: 127 LHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVV 186

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
               II   CK   + +AL   + M+  G+ PN+V ++ LI             ++L+ M
Sbjct: 187 IFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDM 246

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            E ++NP+++T++ +++A+   G   + +++ DDM K  I PD   Y+ L  G+      
Sbjct: 247 IEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRL 306

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           +KA+++   M+     P++  + T+I G+C    ++   E+F +M   G+  +  T+ TL
Sbjct: 307 DKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTL 366

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           + G         A+++ + M + GV P   T+ +L +     G  ++A  +   ++  E
Sbjct: 367 IQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSE 425



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 118/228 (51%), Gaps = 1/228 (0%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F ++K+    + +   L+    +  + ++   +F  +   G     VTYTTL+  L    
Sbjct: 315 FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 374

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
             ++   +  Q+  +G+ PD + ++ +++    +G +E+A++ F  M++S +      Y 
Sbjct: 375 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 434

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           T+I+G   AGK ++   L   +S +G VKPN+ TYN ++   C+++ + EA+ ++ KM  
Sbjct: 435 TMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
            G  PD  TYNT+  A+ ++G+   + E+I EM       +  T G++
Sbjct: 494 DGPLPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 541



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 84/177 (47%)

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M + R  P +  ++ +++A +     D    + + M + GI  + + Y+IL   + R  +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
              A  LL  M++ G+ P++V  +++++G+C    +  A+ + D+M E G  P+  TF T
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           L+ G     +   A  ++  M   G  P   T+ ++       G    A  +L+K++
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKME 177


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  202 bits (514), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 196/378 (51%), Gaps = 6/378 (1%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           P+++ +N VI  F   G ++ A+D   +M+E  G+ P   TY T+I G+   G+ +E+VK
Sbjct: 183 PNAVTYNTVIAGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVK 242

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           + D M  +G VKP    YN L+  +C++  +  A     +M   G+   V TYN +  A 
Sbjct: 243 VFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL 302

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
             +G   +A E++ EM   G+  +  T  I+I+G+CKEG +K+AL     M   GV   +
Sbjct: 303 FMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATV 362

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           V +  LI    +       D++        + PD++ Y+ ++N+ ST+G +D+  EI  +
Sbjct: 363 VTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGE 422

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M K  I PD   Y+ L +G       ++A +L+  M + G  P++V + T+ISG+   G 
Sbjct: 423 MEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGD 482

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +  A+ + ++M   G +P L T+  L+ G  +  Q   AE +++ M   G+ P  ST++ 
Sbjct: 483 VKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 542

Query: 499 LAEARRATGLTKEAKRIL 516
           L E     GLT E +R +
Sbjct: 543 LIE-----GLTTEDERAI 555



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/394 (28%), Positives = 201/394 (51%), Gaps = 7/394 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L   GKP  A  +   +     +P+ VTY T++A    + R  +   IM ++ E G
Sbjct: 160 MLRHLCSAGKPARALELLRQM----PRPNAVTYNTVIAGFCSRGRVQAALDIMREMRERG 215

Query: 138 -MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIAGKPEE 195
            + P+   +  VI+ + + G ++EA+  F +M   G + P    YN LI GY   GK + 
Sbjct: 216 GIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDT 275

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++   D M   G V   + TYN+LV A   +   TEA+ ++ +M   G+  DV TYN + 
Sbjct: 276 ALLYRDRMVERG-VAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILI 334

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + + G   +A E+   M   GV+    T   +I    K+G+++E  +        G+ 
Sbjct: 335 NGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIR 394

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+LV++N LI       + D   E++  M++ R+ PD +TY+T+M      G +D+ +++
Sbjct: 395 PDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKL 454

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            D+M K GI+PD   Y+ L  GY  + + + A  +   M+  GF+P ++ +  +I G C 
Sbjct: 455 IDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCK 514

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +G  D A  +  +M E+G++P+  T+ +L+ G +
Sbjct: 515 NGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 548



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 182/366 (49%), Gaps = 11/366 (3%)

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A   F  M    L   T+T+N +++    AGKP  +++LL  M R     PN  TYN ++
Sbjct: 138 AFALFADMFRLRLPLCTTTFNIMLRHLCSAGKPARALELLRQMPR-----PNAVTYNTVI 192

Query: 221 RAWCNEKNITEAWNVMHKMAA-SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG- 278
             +C+   +  A ++M +M    G+ P+  TY T+ + + + G  D+A +V  EM   G 
Sbjct: 193 AGFCSRGRVQAALDIMREMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGE 252

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           V+P       +I GYC +GK+  AL +   M E GV   +  +NLL+      MD  G +
Sbjct: 253 VKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHAL--FMDGRGTE 310

Query: 339 --EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             E++  M    +  DV TY+ ++N     G + K  EIF++M + G++     Y+ L  
Sbjct: 311 AYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIY 370

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
              ++ + ++ ++L    +  G  P++V++  +I+   + G++DRA E+  +M +  ++P
Sbjct: 371 ALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAP 430

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +  T+ TLM G     +   A +++  M   G+ P   T+  L       G  K+A RI 
Sbjct: 431 DDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIR 490

Query: 517 SKIKNK 522
           +++ NK
Sbjct: 491 NEMMNK 496



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 148/288 (51%), Gaps = 1/288 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+    ++GK   A    + ++E G   ++ TY  L+ AL +  R    + ++ ++   G
Sbjct: 263 LIGGYCDQGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKG 322

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   +N +IN   + GN+++A++ F  M   G+  T  TY +LI      G+ +E+ 
Sbjct: 323 LALDVFTYNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETD 382

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL D   R G ++P+L  YN L+ +     NI  A+ +M +M    + PD VTYNT+   
Sbjct: 383 KLFDEAVRRG-IRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRG 441

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G  D+A ++I EM   G+QP+  T   +ISGY  +G +K+ALR    M   G +P 
Sbjct: 442 LCLLGRVDEARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPT 501

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
           L+ +N LI+G  +    D  + ++  M E  + PD  TY +++   +T
Sbjct: 502 LLTYNALIQGLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTT 549



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 87/327 (26%), Positives = 155/327 (47%), Gaps = 2/327 (0%)

Query: 86  GKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
           G+  EA  +F+ ++  G  KP  V Y  L+     Q + ++      ++ E G+      
Sbjct: 235 GRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQGKLDTALLYRDRMVERGVAMTVAT 294

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +N +++A    G   EA +   +M   GL     TYN LI G+   G  ++++++ + MS
Sbjct: 295 YNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYNILINGHCKEGNVKKALEIFENMS 354

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G V+  + TY  L+ A   +  + E   +  +    G++PD+V YN +  +++ +G  
Sbjct: 355 RRG-VRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGNI 413

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           D+A E++ EME   + P+  T   ++ G C  G++ EA +    M + G+ P+LV +N L
Sbjct: 414 DRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNTL 473

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G+    D      +   M     NP ++TY+ ++      G  D  + +  +M + GI
Sbjct: 474 ISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQGLCKNGQGDDAENMVKEMVENGI 533

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELL 411
            PD   Y  L +G   E E    +E L
Sbjct: 534 TPDDSTYISLIEGLTTEDERAIDDERL 560



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 55/189 (29%), Positives = 101/189 (53%), Gaps = 2/189 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M++   R TV + T L+ +L ++G+ QE   +F+  +  G +P LV Y  L+ + +    
Sbjct: 353 MSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRRGIRPDLVLYNALINSHSTSGN 412

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    IM ++E+  + PD + +N ++      G ++EA     +M + G+ P   TYNT
Sbjct: 413 IDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEARKLIDEMTKRGIQPDLVTYNT 472

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY + G  ++++++ + M  +G   P L TYN L++  C      +A N++ +M  +
Sbjct: 473 LISGYSMKGDVKDALRIRNEMMNKG-FNPTLLTYNALIQGLCKNGQGDDAENMVKEMVEN 531

Query: 243 GMKPDVVTY 251
           G+ PD  TY
Sbjct: 532 GITPDDSTY 540


>gi|242047668|ref|XP_002461580.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
 gi|241924957|gb|EER98101.1| hypothetical protein SORBIDRAFT_02g005000 [Sorghum bicolor]
          Length = 532

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 208/414 (50%), Gaps = 2/414 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P+ VTYT L++        N   + + Q+ + G+  ++I F  ++          +AM+ 
Sbjct: 11  PTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCAEKRTSDAMNI 70

Query: 165 FWK-MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN-VKPNLRTYNVLVRA 222
             +   + G TP   +Y  L+KG     K EE+V L+ +M+ +G+   PN+ +Y  ++  
Sbjct: 71  VIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHG 130

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
           +  E  + +A+ +  +M   G+ PDVVT N+I     +    D+AEEV+ +M    + P+
Sbjct: 131 FFKEDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPD 190

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   ++ GY   G++KEA+R  + M  +G  PN V +++LI    +        E+L 
Sbjct: 191 CTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILN 250

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M + R NP+V TY  +++ ++T G + +   + D M + G++PD H ++I    YV+  
Sbjct: 251 SMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCG 310

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             ++A      M + G  P+++ + T+I G C  G +D A+  F +M + G+SP++  F 
Sbjct: 311 RLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFT 370

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
            L+ G+S   +  +AEE+   M   G+ P    F  + +     G   EAK + 
Sbjct: 371 NLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLF 424



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 197/409 (48%), Gaps = 3/409 (0%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG--MDPDSIFFNAVINAFSESGNME 159
           G  P + +YT LL  L  +K+      ++  + E+G    P+ + +  VI+ F +   + 
Sbjct: 79  GCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVG 138

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           +A   F +M + G+ P   T N++I G       +++ ++L  M  + ++ P+  TYN L
Sbjct: 139 KAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMF-DKHIMPDCTTYNSL 197

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           V  + +   + EA  ++ +M+  G  P+ VTY+ +     + G   +A E++  M  +  
Sbjct: 198 VHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRG 257

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            PN  T G ++ GY  +G + E       M + GV P+  IFN+ I  +V+    D    
Sbjct: 258 NPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAML 317

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
               M++  + PD+I+Y T+++     G +D     F  M   G+ PD   ++ L  G+ 
Sbjct: 318 TFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFS 377

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
              + EKAEEL   M++ G  P VV+FTT+I     +G +  A  +FD M    V PN+ 
Sbjct: 378 MYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVV 437

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           ++  ++ GY  A +     ++L  M + G+ P   TF  L +   + GL
Sbjct: 438 SYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGL 486



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 201/434 (46%), Gaps = 57/434 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHK--PSLVTYTTLLAALTIQKRFNSIHSI 129
           V S T L+  L +  K +EA  + + + E G    P++V+YTT++     +      +++
Sbjct: 84  VFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPNVVSYTTVIHGFFKEDEVGKAYTL 143

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ + G+ PD +  N++I+   +   M++A +   +M +  + P  +TYN+L+ GY  
Sbjct: 144 FCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEEVLRQMFDKHIMPDCTTYNSLVHGYLS 203

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +G+ +E+V++L  MSR G   PN  TY++L+   C     TEA  +++ M  S   P+V 
Sbjct: 204 SGQLKEAVRILKQMSRHGQ-PPNGVTYSMLIDCLCKFGGHTEAREILNSMIQSRGNPNVA 262

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +   YA  G+  +   +I  M  NGV+P+     I I  Y K G++ EA+     M
Sbjct: 263 TYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHHIFNIQIYAYVKCGRLDEAMLTFNKM 322

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG-- 367
           ++ G+ P+++ +  +I G  +I   D        M +  ++PD++ ++ +++ +S  G  
Sbjct: 323 RQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDIVVFTNLIHGFSMYGKW 382

Query: 368 ---------FMDK------------------------CKEIFDDMGKAGIKPDAHAYSIL 394
                     MD+                         K +FD M  A +KP+  +Y+ +
Sbjct: 383 EKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAI 442

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI-------------------ISGWCS 435
             GY    + ++  +LL  M+  G  PN V F T+                   I   C 
Sbjct: 443 IHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLDDMLSMGLKPDVATCNTLIDSCCE 502

Query: 436 DGSMDRAIEVFDKM 449
           DG ++  + +F +M
Sbjct: 503 DGRIEDVLTLFREM 516



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 148/328 (45%), Gaps = 11/328 (3%)

Query: 203 MSREGN--VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA-TAYA 259
           M+R G+  V P   TY +L+   C    +  A+  + ++  +G++ + +++  I  T  A
Sbjct: 1   MARAGSKKVAPTTVTYTILISCCCYVGCLNLAFAALGQIIKTGLRANAISFTPILRTLCA 60

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH--PN 317
           +   +D    VI      G  P+  +  +++ G C E K +EA+     M E G H  PN
Sbjct: 61  EKRTSDAMNIVIRWTPKLGCTPDVFSYTVLLKGLCDEKKCEEAVDLIHMMAEDGDHCPPN 120

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
           +V +  +I GF +    D V +   L  E     + PDV+T ++I++       MDK +E
Sbjct: 121 VVSYTTVIHGFFK---EDEVGKAYTLFCEMLDRGIPPDVVTCNSIIDGLCKVQAMDKAEE 177

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +   M    I PD   Y+ L  GY+   + ++A  +L  M   G  PN V ++ +I   C
Sbjct: 178 VLRQMFDKHIMPDCTTYNSLVHGYLSSGQLKEAVRILKQMSRHGQPPNGVTYSMLIDCLC 237

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G    A E+ + M +   +PN+ T+  L+ GY+          ++ +M   GV P   
Sbjct: 238 KFGGHTEAREILNSMIQSRGNPNVATYGGLLHGYATKGDLVEMNNLIDLMVQNGVRPDHH 297

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
            F +   A    G   EA    +K++ +
Sbjct: 298 IFNIQIYAYVKCGRLDEAMLTFNKMRQQ 325



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 122/242 (50%), Gaps = 17/242 (7%)

Query: 83  IERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS 142
           ++ G+  EA   FN + + G  P +++Y T++  L    R ++  S   Q+ ++G+ PD 
Sbjct: 307 VKCGRLDEAMLTFNKMRQQGLMPDIISYGTMIDGLCKIGRLDAAMSQFCQMIDDGLSPDI 366

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           + F  +I+ FS  G  E+A + F++M + G+ PT   + T+I      GK  E+  L DL
Sbjct: 367 VVFTNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDL 426

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           M    +VKPN+ +YN ++  +     + E   ++  M + G+KP+ VT+NT+        
Sbjct: 427 MPI-ASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTL-------- 477

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
                   + +M   G++P+  TC  +I   C++G+I++ L   R M       + V  N
Sbjct: 478 --------LDDMLSMGLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTEN 529

Query: 323 LL 324
           ++
Sbjct: 530 II 531



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 88/180 (48%), Gaps = 17/180 (9%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++     GK ++A+ +F  +++ G +P++V +TT++  L  + +     ++   +  
Sbjct: 370 TNLIHGFSMYGKWEKAEELFYEMMDRGIRPTVVVFTTMIDKLFKEGKVTEAKTLFDLMPI 429

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + P+ + +NA+I+ +  +G ++E +     M   GL P   T+NTL+           
Sbjct: 430 ASVKPNVVSYNAIIHGYFLAGKLDEVLKLLDDMLSVGLKPNAVTFNTLLD---------- 479

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
                D++S    +KP++ T N L+ + C +  I +   +  +M +   K D VT N I+
Sbjct: 480 -----DMLSM--GLKPDVATCNTLIDSCCEDGRIEDVLTLFREMLSKAAKTDTVTENIIS 532



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 60/130 (46%), Gaps = 16/130 (12%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV   T +++ L + GK  EA+ +F+ +     KP++V+Y  ++    +  + + +  ++
Sbjct: 400 TVVVFTTMIDKLFKEGKVTEAKTLFDLMPIASVKPNVVSYNAIIHGYFLAGKLDEVLKLL 459

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   G+ P+++ FN +++                 M   GL P  +T NTLI      
Sbjct: 460 DDMLSVGLKPNAVTFNTLLD----------------DMLSMGLKPDVATCNTLIDSCCED 503

Query: 191 GKPEESVKLL 200
           G+ E+ + L 
Sbjct: 504 GRIEDVLTLF 513


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 202/401 (50%), Gaps = 7/401 (1%)

Query: 84  ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
           + G  ++A+A+F+ +I  G  P    Y +L+     +K     + ++ ++++  +     
Sbjct: 359 KEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPY 418

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            +  V+     SG+++ A +   +M  SG  P    Y TLIK +    +  +++++L  M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
             +G + P++  YN L+      K + EA + + +M  +G+KP+  TY    + Y +  E
Sbjct: 479 KEQG-IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASE 537

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
              A++ + EM   GV PN   C  +I+ YCK+ K+ EA    R+M + G+  +   + +
Sbjct: 538 FASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTV 597

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           L+ G   +   D VD+   + +E R   + PDV +Y  ++N +S  G M K   IFD+M 
Sbjct: 598 LMNG---LFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMV 654

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
           + G+ P+   Y++L  G+ R  E EKA+ELL  M   G HPN V + TII G+C  G + 
Sbjct: 655 EEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLA 714

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            A  +FD+M   G+ P+   + TL+ G        RA  I 
Sbjct: 715 EAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF 755



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 223/480 (46%), Gaps = 39/480 (8%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G    A  I   +I  G +P++V YTTL+       RF     ++ +++E G+ PD   +
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N++I   S++  M+EA     +M E+GL P   TY   I GY  A +   + K +  M R
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEM-R 549

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           E  V PN      L+  +C ++ + EA +    M   G+  D  TY  +     +N + D
Sbjct: 550 ECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVD 609

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            AEE+  EM   G+ P+  + G++I+G+ K G +++A      M E G+ PN++I+N+L+
Sbjct: 610 DAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLL 669

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF    + +   E+L  M    ++P+ +TY TI++ +  +G + +   +FD+M   G+ 
Sbjct: 670 GGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLV 729

Query: 386 PDAHAYSILAKGYVREQEPEKA----------------------------------EELL 411
           PD+  Y+ L  G  R  + E+A                                   E+L
Sbjct: 730 PDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVL 789

Query: 412 MTMIESGFH----PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +++  F     PN V +  +I   C +G+++ A E+F +M    + P + T+ +L+ G
Sbjct: 790 NRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNG 849

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNE 527
           Y +  +      +     A G+ P    + ++  A    G+T +A  ++ ++  K   ++
Sbjct: 850 YDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDD 909



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 219/463 (47%), Gaps = 42/463 (9%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L +  + ++A+++   +   G      TY+ L+  L   +  ++   ++ ++  +G
Sbjct: 283 LIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHG 342

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++     ++  I   S+ G ME+A   F  M  SGL P    Y +LI+GY       +  
Sbjct: 343 INIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGY 402

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL  M +  N+  +  TY  +V+  C+  ++  A+N++ +M ASG +P+VV Y T+   
Sbjct: 403 ELLVEMKKR-NIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKT 461

Query: 258 YAQN---GEA--------------------------------DQAEEVIVEMEHNGVQPN 282
           + QN   G+A                                D+A   +VEM  NG++PN
Sbjct: 462 FLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPN 521

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T G  ISGY +  +   A ++ + M+E GV PN V+   LI    E   ++ V E  +
Sbjct: 522 AFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLIN---EYCKKEKVIEACS 578

Query: 343 L---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
               M +  +  D  TY+ +MN       +D  +EIF +M   GI PD  +Y +L  G+ 
Sbjct: 579 AYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFS 638

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +    +KA  +   M+E G  PNV+I+  ++ G+C  G +++A E+ D+M   G+ PN  
Sbjct: 639 KLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAV 698

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           T+ T++ GY ++     A  +   MK  G+ P    +  L + 
Sbjct: 699 TYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDG 741



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 195/417 (46%), Gaps = 19/417 (4%)

Query: 59  HCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT 118
            C    NK  C      T L+N   ++ K  EA + + ++++ G      TYT L+  L 
Sbjct: 550 ECGVLPNKVLC------TGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLMNGLF 603

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
              + +    I  ++   G+ PD   +  +IN FS+ GNM++A   F +M E GLTP   
Sbjct: 604 KNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVI 663

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
            YN L+ G+  +G+ E++ +LLD MS +G + PN  TY  ++  +C   ++ EA+ +  +
Sbjct: 664 IYNMLLGGFCRSGEIEKAKELLDEMSVKG-LHPNAVTYCTIIDGYCKSGDLAEAFRLFDE 722

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M   G+ PD   Y T+     +  + ++A   I      G   +      +I+   K GK
Sbjct: 723 MKLKGLVPDSFVYTTLVDGCCRLNDVERA-ITIFGTNKKGCASSTAPFNALINWVFKFGK 781

Query: 299 IK---EALR--FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
            +   E L      +   +G  PN V +N++I    +  + +   E+   M+   + P V
Sbjct: 782 TELKTEVLNRLMDGSFDRFG-KPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTV 840

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           ITY++++N +   G   +   +FD+   AGI+PD   YS++   +++E    KA  L+  
Sbjct: 841 ITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQ 900

Query: 414 M-----IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           M     ++ G   ++     ++SG+   G M+ A +V + M      P+  T   L+
Sbjct: 901 MFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 151/350 (43%), Gaps = 26/350 (7%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           +  L  GY   G  EE+V +    S    + P L    VL+ A      +   W+V   M
Sbjct: 154 FGILFDGYIAKGYIEEAVFVFS-SSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGM 212

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH---------------------NG 278
               +  DV TY+ +  A+ + G     ++V+ + E                       G
Sbjct: 213 VERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKG 272

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           + P   T  ++I G CK  ++++A      M   GV  +   ++LLI G ++  + D   
Sbjct: 273 LVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAK 332

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            ++  M    +N     Y   +   S  G M+K K +FD M  +G+ P A AY+ L +GY
Sbjct: 333 GLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGY 392

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            RE+   +  ELL+ M +     +   + T++ G CS G +D A  +  +M   G  PN+
Sbjct: 393 CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNV 452

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ----KSTFLLLAEARR 504
             + TL+  + +  +   A  +L+ MK  G+ P      S  + L++A+R
Sbjct: 453 VIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKR 502



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/332 (24%), Positives = 148/332 (44%), Gaps = 42/332 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L+N   + G  Q+A +IF+ ++E G  P+++ Y  LL              ++ 
Sbjct: 627 VFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLD 686

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY---- 187
           ++   G+ P+++ +  +I+ + +SG++ EA   F +MK  GL P +  Y TL+ G     
Sbjct: 687 EMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLN 746

Query: 188 --------------GIA----------------GKPEESVKLLDLM---SREGNVKPNLR 214
                         G A                GK E   ++L+ +   S +   KPN  
Sbjct: 747 DVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TYN+++   C E N+  A  + H+M  + + P V+TY ++   Y + G   +   V  E 
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEAL-----RFARTMKEYGVHPNLVIFNLLIKGFV 329
              G++P+     +II+ + KEG   +AL      FA+   + G   ++     L+ GF 
Sbjct: 867 IAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFA 926

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           ++ + +  ++V+  M   +  PD  T   ++N
Sbjct: 927 KVGEMEVAEKVMENMVRLQYIPDSATVIELIN 958



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 58/267 (21%), Positives = 103/267 (38%), Gaps = 56/267 (20%)

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL----VIFNLLI----- 325
           E  G   +G   GI+  GY  +G I+EA+    +     + P L    V+ + L+     
Sbjct: 143 EFVGKSDDGVLFGILFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRL 202

Query: 326 -------KGFVE---IMD-----------------RDGVDEVLALMKEFR---------- 348
                  KG VE   + D                 + G D +    KEFR          
Sbjct: 203 DLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGAL 262

Query: 349 ----------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
                     + P   TY  +++       ++  K +  +M   G+  D H YS+L  G 
Sbjct: 263 KLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGL 322

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           ++ +  + A+ L+  M+  G +    ++   I     +G M++A  +FD M   G+ P  
Sbjct: 323 LKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQA 382

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMK 485
           + + +L+ GY   +   +  E+L  MK
Sbjct: 383 QAYASLIEGYCREKNVRQGYELLVEMK 409


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 122/454 (26%), Positives = 222/454 (48%), Gaps = 39/454 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + ++ SL++  KP+E+                                   + ++ 
Sbjct: 10  VFTYSSIIKSLVKEAKPEES-----------------------------------YKVLE 34

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G +PD   FN V+  F+ S NME+A + +  M ESG  P   +Y+ LI G    G
Sbjct: 35  EMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIG 94

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +ES+K+L  M   G   P+++ Y+ LVRA    + +  A ++  +M   G  PD + +
Sbjct: 95  KLDESLKILSEMVMRGQT-PSMQAYSSLVRALAKARRVDHASSLFDEMIRGGHHPDRLMF 153

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     Q G+   A E   +M  +G QPN     +++ G C  G++++A      MK 
Sbjct: 154 YELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKS 213

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           +   P++V +N L+    +    +   ++   M+     P+VIT+ST+++     G ++K
Sbjct: 214 HSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEK 273

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+F  M +AG KP+ + Y+ L  G  R ++  +A EL   M ++   P+ V + ++I+
Sbjct: 274 ALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIA 333

Query: 432 GWCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           G+C  GSMD A +++ +M    G+ P + TF TL+ G+ +  +  RA E++  M   G+ 
Sbjct: 334 GYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLA 393

Query: 491 PQKSTF-LLLAEARRATGLTKEAKRILSKIKNKE 523
               T+ +L+A   RAT L  EA  +  +++ K+
Sbjct: 394 ADSCTYRILIAGLSRATKL-DEALEVYKQMREKK 426



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 211/419 (50%), Gaps = 8/419 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + GK  E+  I + ++  G  PS+  Y++L+ AL   +R +   S+  ++   G
Sbjct: 86  LIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRVDHASSLFDEMIRGG 145

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + F  +I    ++G +++A + F +M + G  P    YN L+ G   +G+ E++ 
Sbjct: 146 HHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVLLHGLCSSGQLEQAN 205

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M +  +  P++ TYN L+ A C  + + E   +   M A+G  P+V+T++T+   
Sbjct: 206 TLFAEM-KSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGYVPNVITFSTLIHG 264

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + GE ++A EV   M   G +PN  T   +ISG C+  K+ +A      M +  + P+
Sbjct: 265 LCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARELFEKMTQACIPPD 324

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR----VNPDVITYSTIMNAWSTAGFMDKCK 373
            V +N LI G+ +   R  +DE   L +E      + P ++T++T+++ +   G + +  
Sbjct: 325 AVAYNSLIAGYCK---RGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRAN 381

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+  +MG  G+  D+  Y IL  G  R  + ++A E+   M E  F  + V   + + G 
Sbjct: 382 ELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFVGGL 441

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           C  G++D+A  VF+   + G  PN +TF  L     +  +   A+++++  KA  +  Q
Sbjct: 442 CKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDITAQ 500



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 189/391 (48%), Gaps = 37/391 (9%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M++  +     TY+++IK      KPEES K+L+ M   G   P++  +N +++ +    
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAG-CNPDVFAFNGVMQGFARSN 59

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           N+ +A  V   M  SG KPD V+Y+ +    A+ G+ D++ +++ EM   G  P+ +   
Sbjct: 60  NMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYS 119

Query: 288 IIIS-----------------------------------GYCKEGKIKEALRFARTMKEY 312
            ++                                    G C+ GK+K+A    + M ++
Sbjct: 120 SLVRALAKARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKH 179

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G  PN+ ++N+L+ G       +  + + A MK    +PDV+TY+T+++A   A  +++ 
Sbjct: 180 GCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEG 239

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            ++F+ M  AG  P+   +S L  G  R  E EKA E+  +M+E+G  PN   +TT+ISG
Sbjct: 240 CKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISG 299

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK-AFGVHP 491
            C    + +A E+F+KM +  + P+   + +L+ GY +      AE++ + M    G+ P
Sbjct: 300 LCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQP 359

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              TF  L +     G    A  +++++  K
Sbjct: 360 TIVTFNTLIDGFCKLGKLGRANELVAEMGTK 390



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 137/305 (44%), Gaps = 38/305 (12%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C+  V     L++ L   G+ ++A  +F  +      P +VTY TLL A+   +R
Sbjct: 176 MPKHGCQPNVPVYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARR 235

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +   +   G  P+ I F+ +I+    +G +E+A++ F  M E+G  P   TY T
Sbjct: 236 VEEGCKLFEAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTT 295

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA- 241
           LI G   A K  ++ +L + M+ +  + P+   YN L+  +C   ++ EA  +  +M+  
Sbjct: 296 LISGLCRAEKVIQARELFEKMT-QACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGG 354

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY-------- 293
           +G++P +VT+NT+   + + G+  +A E++ EM   G+  +  T  I+I+G         
Sbjct: 355 AGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDE 414

Query: 294 ---------------------------CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
                                      CK G I +A       ++ G  PN   F +L +
Sbjct: 415 ALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSE 474

Query: 327 GFVEI 331
             +++
Sbjct: 475 SLIKL 479



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 56/117 (47%)

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M +     NV  +++II     +   + + +V ++M   G +P++  F  +M G++ +  
Sbjct: 1   MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 60

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEA 530
             +A E+ Q M   G  P   ++ +L       G   E+ +ILS++  + +T  M+A
Sbjct: 61  MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQA 117


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 213/449 (47%), Gaps = 7/449 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L   GK  EA  +F+ +I  G +P++VTY TL+  L      ++   ++  +
Sbjct: 142 TFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 201

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+    P+ + F+ +I++  +   + EA + F +M   G++P   TYN+LI G     + 
Sbjct: 202 EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 261

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +    L++ M  +  + P++ T N +V A C E  + EA +V+  M   G++P+VVTYN 
Sbjct: 262 KHVTTLMNEMV-DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 320

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +    E D A +V   M H     N  +   +I+GYCK   + +A+     M    
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMD 370
           + PN V +N LI G   +     + + ++L  E       PD++TY T+ +       +D
Sbjct: 381 LTPNTVTYNTLIHGLCHV---GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 437

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +   +  +   PD   Y+ +  G  R  E E A +L   +   G  PNV  +  +I
Sbjct: 438 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 497

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C  G +  A ++F +M ++G SPN  T+  +  G+    +  R  E+L+ M A G  
Sbjct: 498 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS 557

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
              ST  LL       GL +  K+IL KI
Sbjct: 558 VDVSTTTLLVGMLSDDGLDQSVKQILCKI 586



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 205/447 (45%), Gaps = 8/447 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++  ++NSL    +   A +    +++ GH+P   T+TTL+  L ++ +      +  
Sbjct: 105 VYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFD 164

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  P+ + +  +IN   + GN   A+     M++    P    ++TLI       
Sbjct: 165 KMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDR 224

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  +   M  +G + PN+ TYN L+   C          +M++M  S + PDV T 
Sbjct: 225 QVTEAFNIFSEMITKG-ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 283

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+  A  + G   +A +V+  M H GV+PN  T   ++ G+C   ++  A++   TM  
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
                N++ +N LI G+ +I   D    +   M    + P+ +TY+T+++     G +  
Sbjct: 344 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQD 403

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F +M   G  PD   Y  L+    + +  +KA  LL  +  S + P++ I+TTI+ 
Sbjct: 404 AISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILD 463

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G ++ A ++F  +   G+ PN+ T+  ++ G  +      A ++   M   G  P
Sbjct: 464 GMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSP 523

Query: 492 QKSTFLLLA-------EARRATGLTKE 511
              T+ L+        EA R   L +E
Sbjct: 524 NDCTYNLITRGFLRNNEALRTIELLEE 550



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 199/433 (45%), Gaps = 1/433 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           EA + FN ++     PS V +  LL ++   K  +++ S+  Q++  G+ PD      VI
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N+      ++ A     K+ + G  P  +T+ TLI+G  + GK  E++ L D M  EG  
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG-F 171

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +PN+ TY  L+   C   N + A  ++  M     +P+VV ++T+  +  ++ +  +A  
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  EM   G+ PN  T   +I G CK  + K        M +  + P++   N ++    
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +        +V+ +M    V P+V+TY+ +M+       +D   ++FD M       +  
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI 351

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           +Y+ L  GY + Q  +KA  L   M      PN V + T+I G C  G +  AI +F +M
Sbjct: 352 SYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM 411

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G  P+L T+ TL     + R   +A  +L+ ++     P    +  + +     G  
Sbjct: 412 VARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGEL 471

Query: 510 KEAKRILSKIKNK 522
           ++A+ + S + +K
Sbjct: 472 EDARDLFSNLSSK 484



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 171/378 (45%), Gaps = 34/378 (8%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLI-------------------KGYGIAGKPEESVK 198
           ++EA+ TF +M      P+T  +N L+                     +GI         
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 199 LLDLMSREGNV---------------KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           +++ +     V               +P+  T+  L+R  C E  I EA ++  KM   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
            +P+VVTY T+     + G    A  ++  ME    QPN      +I   CK+ ++ EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M   G+ PN+V +N LI G  ++ +   V  ++  M + ++ PDV T +T+++A 
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G + +  ++ D M   G++P+   Y+ L  G+    E + A ++  TM+      NV
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           + + T+I+G+C   S+D+A+ +F++M    ++PN  T+ TL+ G     +   A  +   
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 484 MKAFGVHPQKSTFLLLAE 501
           M A G  P   T+  L++
Sbjct: 411 MVARGQIPDLVTYRTLSD 428



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 69/321 (21%), Positives = 131/321 (40%), Gaps = 14/321 (4%)

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           ++NT  +        D+A      M H    P+      +++   K       L  +R M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
             +G+ P++    ++I     +   D     LA + +    PD  T++T++      G +
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +   +FD M   G +P+   Y  L  G  +      A  LL +M +    PNVV+F+T+
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I   C D  +  A  +F +M   G+SPN+ T+ +L+ G  +  +      ++  M    +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNK------------ERTNEMEAEEDIPVE 537
            P   T   + +A    G+  EA  ++  + ++               + +  E D+ V+
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336

Query: 538 SLERLYHKE--ATTASYPNLL 556
             + + HK+  A   SY  L+
Sbjct: 337 VFDTMVHKDCVANVISYNTLI 357



 Score = 45.8 bits (107), Expect = 0.063,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 1/127 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           ++  T +++ +   G+ ++A+ +F+NL   G +P++ TY  ++  L  Q        + S
Sbjct: 455 IQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFS 514

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +NG  P+   +N +   F  +      ++   +M   G +   ST  TL+ G     
Sbjct: 515 EMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVST-TTLLVGMLSDD 573

Query: 192 KPEESVK 198
             ++SVK
Sbjct: 574 GLDQSVK 580


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 222/444 (50%), Gaps = 1/444 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++ L    K  EA A+ + +++ G +P+LVTY  ++  L  +   +   ++++++
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 251

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E   ++ D + FN +I++  +  ++++A++ F +M+  G+ P   TY++LI      G+ 
Sbjct: 252 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 311

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ +LL  M  E  + PNL T+N L+ A+  E    EA  +   M    + PD+ TYN+
Sbjct: 312 SDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 370

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +  +   D+A+++   M      P+  T   +I G+CK  ++++     R M   G
Sbjct: 371 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 430

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           +  + V +  LI+G     D D   +V   M    V PD++TYS +++     G ++K  
Sbjct: 431 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 490

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+FD M K+ IK D + Y+ + +G  +  + +   +L  ++   G  PNVV + T+ISG 
Sbjct: 491 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           CS   +  A  +  KM E G  PN  T+ TL+  +        + E+++ M++       
Sbjct: 551 CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 610

Query: 494 STFLLLAEARRATGLTKEAKRILS 517
           ST  L+A       L K    +LS
Sbjct: 611 STIGLVANMLHDGRLDKSFLDMLS 634



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 225/444 (50%), Gaps = 3/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N    R +   A A+   +++ G++PS+VT ++LL      KR +   +++ Q+ E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD+I F  +I+         EA+    +M + G  P   TY  ++ G    G  + ++
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ M     ++ ++  +N ++ + C  +++ +A N+  +M   G++P+VVTY+++ + 
Sbjct: 246 NLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G    A +++ +M    + PN  T   +I  + KEGK  EA +    M +  + P+
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364

Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +  +N L+ GF  + DR D   ++   M      PDV+TY+T++  +  +  ++   E+F
Sbjct: 365 IFTYNSLVNGFC-MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M   G+  D   Y+ L +G   + + + A+++   M+  G  P+++ ++ ++ G C++
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +++A+EVFD M +  +  ++  + T++ G  +A +     ++   +   GV P   T+
Sbjct: 484 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 543

Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
             +     +  L +EA  +L K+K
Sbjct: 544 NTMISGLCSKRLLQEAYALLKKMK 567



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 218/437 (49%), Gaps = 1/437 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +++ L+N      +  +A A+ + ++E G++P  +T+TTL+  L +  + +   +++
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G  P+ + +  V+N   + G+ + A++   KM+ + +      +NT+I      
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY 273

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              ++++ L   M  +G ++PN+ TY+ L+   C+    ++A  ++  M    + P++VT
Sbjct: 274 RHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 332

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +N +  A+ + G+  +AE++  +M    + P+  T   +++G+C   ++ +A +    M 
Sbjct: 333 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                P++V +N LIKGF +    +   E+   M    +  D +TY+T++      G  D
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             +++F  M   G+ PD   YSIL  G     + EKA E+   M +S    ++ I+TT+I
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C  G +D   ++F  +   GV PN+ T+ T++ G    R    A  +L+ MK  G  
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572

Query: 491 PQKSTFLLLAEARRATG 507
           P   T+  L  A    G
Sbjct: 573 PNSGTYNTLIRAHLRDG 589



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 214/437 (48%), Gaps = 1/437 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A  +F  +++    PS+V +  LL+A+   K+F+ + S+  +++   +      +N
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN F     +  A+    KM + G  P+  T ++L+ GY    +  ++V L+D M   
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +P+  T+  L+         +EA  ++ +M   G +P++VTY  +     + G+ D 
Sbjct: 185 G-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 243

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  ++ +ME   ++ +      II   CK   + +AL   + M+  G+ PN+V ++ LI 
Sbjct: 244 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 303

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
                       ++L+ M E ++NP+++T++ +++A+   G   + ++++DDM K  I P
Sbjct: 304 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 363

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   Y+ L  G+      +KA+++   M+     P+VV + T+I G+C    ++   E+F
Sbjct: 364 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 423

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            +M   G+  +  T+ TL+ G         A+++ + M + GV P   T+ +L +     
Sbjct: 424 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 483

Query: 507 GLTKEAKRILSKIKNKE 523
           G  ++A  +   ++  E
Sbjct: 484 GKLEKALEVFDYMQKSE 500



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 118/228 (51%), Gaps = 1/228 (0%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F ++K+    V +   L+    +  + ++   +F  +   G     VTYTTL+  L    
Sbjct: 390 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 449

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
             ++   +  Q+  +G+ PD + ++ +++    +G +E+A++ F  M++S +      Y 
Sbjct: 450 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 509

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           T+I+G   AGK ++   L   +S +G VKPN+ TYN ++   C+++ + EA+ ++ KM  
Sbjct: 510 TMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 568

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
            G  P+  TYNT+  A+ ++G+   + E+I EM       +  T G++
Sbjct: 569 DGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 616


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 216/437 (49%), Gaps = 15/437 (3%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+N L    + +E  A F  ++  G+ P++VTY TL+  L ++ R +    +  ++
Sbjct: 106 TLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM 165

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM------KESGLTPTTSTYNTLIKGY 187
           ++ G  PD + +  +I     +GN+  A+    +M       E    P   TYN ++ G 
Sbjct: 166 QKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGL 225

Query: 188 GIAGKPEESVKLLDLMSREG---------NVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
              G+ +E+ +L + M  +G          ++P++ T+NVL+   C E  + EA  ++  
Sbjct: 226 CKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGV 285

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  SG+ PD+VTYN++   +   G+ + A E+ V M   G +P+  +  ++I+GY K  K
Sbjct: 286 MIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLK 345

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           ++EA++    M   G  PN++ ++ L+KG       D   ++ ++MK   +  +  TY  
Sbjct: 346 VEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGI 405

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
            ++       + +  ++F ++  +  K +    + L  G  +  + E A EL   +   G
Sbjct: 406 FLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEG 465

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PNVV +T +I G+C +G +D+A  +  KM  +G +P++ T+ TLM G+ E+ +     
Sbjct: 466 HEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVV 525

Query: 479 EILQIMKAFGVHPQKST 495
           ++L  M    V P   T
Sbjct: 526 QLLHRMAQKDVSPDAIT 542



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 215/485 (44%), Gaps = 52/485 (10%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
            A   F+ ++     PSL ++  LL+ L   K ++ + S+ +Q+  +G+  D    N ++
Sbjct: 52  HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N       + E    F  +   G +P   TYNTLIKG  +  +  E+ +L   M + G  
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG-C 170

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS------GMKPDVVTYNTIATAYAQNGE 263
            P++ TY  L++  C   NI  A  +  +M           KP+V+TYN I     + G 
Sbjct: 171 TPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGR 230

Query: 264 ADQAEEVIVEME----------HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
            D+A+++  EM+            G+QP+  T  ++I   CKEGK+ EA +    M E G
Sbjct: 231 EDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESG 290

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS--------- 364
           + P+LV +N LI+GF  + D +   E+   M      PDVI+Y+ ++N +S         
Sbjct: 291 IVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAM 350

Query: 365 --------------------------TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
                                      AG +D  K++F  M   GI  +++ Y I   G 
Sbjct: 351 KLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGL 410

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +     +A +L   +  S F   +     +I G C  G ++ A E+F+K+   G  PN+
Sbjct: 411 CKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNV 470

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+  ++ G+    Q  +A  ++Q M+A G  P   T+  L      +   +E  ++L +
Sbjct: 471 VTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHR 530

Query: 519 IKNKE 523
           +  K+
Sbjct: 531 MAQKD 535



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 87/366 (23%), Positives = 169/366 (46%), Gaps = 12/366 (3%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM----------DPDSIFFNAVINAFS 153
           KP+++TY  ++  L    R +    +  +++  GM           PD + FN +I+   
Sbjct: 212 KPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLC 271

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           + G + EA      M ESG+ P   TYN+LI+G+ + G    + +L   M  +G  +P++
Sbjct: 272 KEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG-CEPDV 330

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            +YNVL+  +     + EA  + ++M   G +P+V+TY+++       G+ D A+++   
Sbjct: 331 ISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSV 390

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M+ +G+  N  T GI + G CK   + EA++    +K       +   N LI G  +   
Sbjct: 391 MKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGK 450

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            +   E+   +      P+V+TY+ +++ +   G +DK   +   M   G  PD   Y+ 
Sbjct: 451 LETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNT 510

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM-CEH 452
           L +G+    + E+  +LL  M +    P+ +  + ++     D      + +  +   + 
Sbjct: 511 LMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRFPIQK 570

Query: 453 GVSPNL 458
           GV  +L
Sbjct: 571 GVDKHL 576



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 62/234 (26%), Positives = 125/234 (53%), Gaps = 1/234 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L+N   +  K +EA  ++N ++  G +P+++TY +LL  + +  + +    + S
Sbjct: 330 VISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFS 389

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++ +G+  +S  +   ++   ++  + EAM  F ++K S         N LI G   AG
Sbjct: 390 VMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAG 449

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K E + +L + +S EG+ +PN+ TY +++  +C E  + +A  ++ KM A+G  PD++TY
Sbjct: 450 KLETAWELFEKLSNEGH-EPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITY 508

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           NT+   + ++ + ++  +++  M    V P+  TC I++    K+ K +E L  
Sbjct: 509 NTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHL 562



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 154/351 (43%), Gaps = 55/351 (15%)

Query: 224 CNEKNIT--EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
           C   N+T   A +  H M  S   P + ++N + +  A+     Q   +  +M  +G+  
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG-------------F 328
           +  T  I+++  C   +++E       +   G  PN+V +N LIKG             F
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 329 VEIMDRDGV---------------------------DEVLALMKEFRVN--PDVITYSTI 359
           +  M + G                             E+L  +  + +N  P+VITY+ I
Sbjct: 163 LR-MQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221

Query: 360 MNAWSTAGFMDKCKEIFDDMG----------KAGIKPDAHAYSILAKGYVREQEPEKAEE 409
           ++     G  D+ K++F++M             G++PD   +++L     +E +  +A++
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 281

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           LL  MIESG  P++V + ++I G+C  G ++ A E+F  M   G  P++ ++  L+ GYS
Sbjct: 282 LLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYS 341

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  +   A ++   M   G  P   T+  L +     G   +AK++ S +K
Sbjct: 342 KTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMK 392



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 18/242 (7%)

Query: 293 YCKEGKIK--EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
           +CK G +    AL F   M      P+L  FN L+ G  +I     V  +   M+   ++
Sbjct: 42  HCKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLS 101

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
            D  T + ++N       + +    F  + + G  P+   Y+ L KG   E    +A  L
Sbjct: 102 SDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRL 161

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC------EHGVSPNLKTFETL 464
            + M + G  P+VV + T+I G C  G+++ A+++  +M       E    PN+ T+  +
Sbjct: 162 FLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNII 221

Query: 465 MWGYSEARQPWRAEEILQIMKA----------FGVHPQKSTFLLLAEARRATGLTKEAKR 514
           + G  +  +   A+++ + MK            G+ P   TF +L +     G   EAK+
Sbjct: 222 VDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKK 281

Query: 515 IL 516
           +L
Sbjct: 282 LL 283



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 68/129 (52%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + ++  L++ L + GK + A  +F  L   GH+P++VTYT ++     + + +  + ++ 
Sbjct: 435 IENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQ 494

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++E NG  PD I +N ++  F ES  +EE +    +M +  ++P   T + ++       
Sbjct: 495 KMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDE 554

Query: 192 KPEESVKLL 200
           K +E + LL
Sbjct: 555 KYQECLHLL 563


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 228/458 (49%), Gaps = 7/458 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S   +MN L+E G  ++A  +F  +   G  P + T+T  + +    KR +S   ++
Sbjct: 110 SVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLL 169

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + +   G   +++ +  V+  F E     EA + F  M   G+ P  ST+N L+      
Sbjct: 170 NNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKK 229

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ +ES +LL+ + ++G +  NL T+N+ ++  C +  ++ A +++  +   G+ PDVVT
Sbjct: 230 GEVQESERLLNKVLKKG-MCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVT 288

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+     +N    +AE+ + ++ + G++P+G T   +I GYCK G ++ A +  +   
Sbjct: 289 YNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAI 348

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
             G  P+   +  LI G  +    D +D  LAL        + P VI Y+ ++      G
Sbjct: 349 CKGFVPDEFTYCSLINGLCQ---NDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEG 405

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            + +  ++ ++M + G   D   Y+++  G  +      A  L+   I  G+ P+V  F 
Sbjct: 406 LILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFN 465

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T+I G+C    M+  I++ +KM  HGV+P++ T+ +++ G S+A +     E  + M   
Sbjct: 466 TLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEK 525

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
           G  P K T+ +L E+    G   EA  ++ +I NK  T
Sbjct: 526 GCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGIT 563



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 221/452 (48%), Gaps = 2/452 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +  KL+++L ++G+ QE++ + N +++ G   +L T+   +  L  +   +   S++ 
Sbjct: 216 VSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLD 275

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            V   G+ PD + +N +I    ++ N+ EA     K+   GL P   TYNTLI GY   G
Sbjct: 276 SVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMG 335

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + + K+L     +G V P+  TY  L+   C    I  A  + +     G+KP V+ Y
Sbjct: 336 MLQNAEKILQGAICKGFV-PDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILY 394

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     Q G   QA +++ EM  NG   +  T  ++I+G CK G + +A         
Sbjct: 395 NMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIA 454

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P++  FN LI G+ + +  +   ++L  M    V PDVITY++++N  S A   + 
Sbjct: 455 KGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNED 514

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E F+ M + G  P+   Y+IL +   +  +  +A +L+  ++  G  P+ V F TIIS
Sbjct: 515 LMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIIS 574

Query: 432 GWCSDGSMDRAIEVFDKMCE-HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           G+ ++G +  A ++F +M E + VS    T+  ++  ++E       E++   M A G  
Sbjct: 575 GFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCA 634

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+ ++ +    TG T    + L ++  K
Sbjct: 635 PDTYTYRVMIDGFCITGNTDSGYKFLLEMIEK 666



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 111/471 (23%), Positives = 216/471 (45%), Gaps = 7/471 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T  + S     +P  A  + NN++  G + + V Y T++A    +      + + +
Sbjct: 146 VYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFN 205

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ PD   FN +++   + G ++E+     K+ + G+     T+N  I+G    G
Sbjct: 206 DMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKG 265

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++ +LD + REG + P++ TYN L+   C   N+ EA   +HK+   G++PD  TY
Sbjct: 266 MLSGAMSMLDSVIREG-LTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTY 324

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   Y + G    AE+++      G  P+  T   +I+G C+  +I  AL        
Sbjct: 325 NTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALG 384

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGF 368
            G+ P ++++N+LIKG  +      + + L +M E   N    D+ TY+ ++N     G 
Sbjct: 385 KGLKPTVILYNMLIKGLCQ---EGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGC 441

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +     + +D    G  PD   ++ L  GY ++ + E   ++L  M   G  P+V+ + +
Sbjct: 442 VSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNS 501

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +++G       +  +E F+ M E G  PN  T+  L     +A +   A +++  +   G
Sbjct: 502 VLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKG 561

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESL 539
           + P   +F  +       G  K A ++  ++  + + +   A  +I + + 
Sbjct: 562 ITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAF 612



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 187/413 (45%), Gaps = 17/413 (4%)

Query: 60  CSFCMNKESCRTVRSMTKLMNSLIE---------------RGKPQEAQAIFNNLIEGGHK 104
           C  C N       + + KL+N  +E                G  Q A+ I    I  G  
Sbjct: 294 CGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFV 353

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P   TY +L+  L      +   ++ +     G+ P  I +N +I    + G + +A+  
Sbjct: 354 PDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQM 413

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
             +M E+G +    TYN +I G    G   ++  L++    +G V P++ T+N L+  +C
Sbjct: 414 MNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYV-PDVFTFNTLIDGYC 472

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
            +  +     +++KM + G+ PDV+TYN++    ++  + +   E    M   G  PN  
Sbjct: 473 KQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKI 532

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T  I+    CK GK+ EAL     +   G+ P+ V F  +I GF    D  G  ++   M
Sbjct: 533 TYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM 592

Query: 345 KE-FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
            E ++V+    TY+ ++NA++    +   +++F +MG  G  PD + Y ++  G+     
Sbjct: 593 GEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGN 652

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
            +   + L+ MIE GF P++  F  +I+  C    +  A+++   M  +G+ P
Sbjct: 653 TDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVP 705



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 105/452 (23%), Positives = 205/452 (45%), Gaps = 38/452 (8%)

Query: 82  LIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE---ENG 137
           L ++  P +A  +FN +  E G K SL+TY  ++  L     F ++ +++++     +N 
Sbjct: 14  LKQQKDPLKALEMFNKVKREDGFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNS 73

Query: 138 M---------------------------------DPDSIFFNAVINAFSESGNMEEAMDT 164
           +                                 +P  + +NA++N   ESG  ++A   
Sbjct: 74  LLEGVYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKV 133

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F +MK  G+ P   T+   IK +    +P  +++LL+ M  +G  + N   Y  +V  + 
Sbjct: 134 FLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQG-CQLNAVAYCTVVAGFY 192

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
            E    EA+ + + M   G+ PDV T+N +     + GE  ++E ++ ++   G+  N  
Sbjct: 193 EENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLF 252

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T  I I G C++G +  A+    ++   G+ P++V +N LI G  +  +    ++ L  +
Sbjct: 253 TFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL 312

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
               + PD  TY+T+++ +   G +   ++I       G  PD   Y  L  G  +  E 
Sbjct: 313 VNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEI 372

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           ++A  L    +  G  P V+++  +I G C +G + +A+++ ++M E+G S ++ T+  +
Sbjct: 373 DRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLV 432

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           + G  +      A  ++    A G  P   TF
Sbjct: 433 INGLCKMGCVSDANNLMNDAIAKGYVPDVFTF 464



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 102/465 (21%), Positives = 202/465 (43%), Gaps = 37/465 (7%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           + K  C  + +    +  L  +G    A ++ +++I  G  P +VTY TL+  L      
Sbjct: 243 LKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNV 302

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                 + ++   G++PD   +N +I+ + + G ++ A          G  P   TY +L
Sbjct: 303 VEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSL 362

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G     + + ++ L +    +G +KP +  YN+L++  C E  I +A  +M++M+ +G
Sbjct: 363 INGLCQNDEIDRALALFNAALGKG-LKPTVILYNMLIKGLCQEGLILQALQMMNEMSENG 421

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
              D+ TYN +     + G    A  ++ +    G  P+  T   +I GYCK+ K++  +
Sbjct: 422 CSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTI 481

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
           +    M  +GV P+++ +N ++ G  + +  + + E    M E    P+ ITY+ +  + 
Sbjct: 482 QILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESL 541

Query: 364 STAGFMDKCKEIFDDMGKAGIKPD---------------------------------AH- 389
             AG +++  ++ D++   GI PD                                 +H 
Sbjct: 542 CKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHT 601

Query: 390 --AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+I+   +  + +    E+L + M   G  P+   +  +I G+C  G+ D   +   
Sbjct: 602 TATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLL 661

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +M E G  P+L TF  ++       +   A +I+  M   G+ P+
Sbjct: 662 EMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPE 706



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 129/292 (44%), Gaps = 36/292 (12%)

Query: 64  MNKESCRT-VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M++  C + + +   ++N L + G   +A  + N+ I  G+ P + T+ TL+     Q +
Sbjct: 417 MSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLK 476

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
             +   I++++  +G+ PD I +N+V+N  S++   E+ M+TF  M E G  P   TYN 
Sbjct: 477 METTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNI 536

Query: 183 LIKGYGIAGKPEESVKLLD--------------------------------LMSREG--- 207
           L +    AGK  E++ L+D                                L  R G   
Sbjct: 537 LTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQY 596

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
            V     TYN+++ A+  + ++     +  +M A G  PD  TY  +   +   G  D  
Sbjct: 597 KVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSG 656

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
            + ++EM   G  P+  T G +I+  C + ++ EA+     M   G+ P +V
Sbjct: 657 YKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVPEVV 708



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 38/279 (13%)

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVE--MEHNGVQPNGRTCGIIISGYCKEGKIK 300
           G K  ++TY  I      +G     E V+ E  M+ +     G   G + S Y ++GK++
Sbjct: 35  GFKHSLLTYKCIIQKLGFHGNFVAMENVLAETRMDIDNSLLEGVYIGAMKS-YGRKGKVQ 93

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           EA                          V++ +R         M  +   P V++Y+ IM
Sbjct: 94  EA--------------------------VDVFER---------MDFYNCEPSVLSYNAIM 118

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           N    +G+  +  ++F  M   GI PD + ++I  K + R + P  A  LL  M+  G  
Sbjct: 119 NILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQ 178

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
            N V + T+++G+  +     A E+F+ M   G+ P++ TF  L+    +  +   +E +
Sbjct: 179 LNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERL 238

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           L  +   G+     TF +  +     G+   A  +L  +
Sbjct: 239 LNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSV 277



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 72/168 (42%)

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
            Y   M ++   G + +  ++F+ M     +P   +Y+ +    V     ++A ++ + M
Sbjct: 78  VYIGAMKSYGRKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM 137

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
              G  P+V  FT  I  +C       A+ + + M   G   N   + T++ G+ E    
Sbjct: 138 KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYR 197

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             A E+   M   G+ P  STF  L       G  +E++R+L+K+  K
Sbjct: 198 VEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKK 245


>gi|224097576|ref|XP_002310993.1| predicted protein [Populus trichocarpa]
 gi|222850813|gb|EEE88360.1| predicted protein [Populus trichocarpa]
          Length = 877

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 130/461 (28%), Positives = 221/461 (47%), Gaps = 44/461 (9%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTI------QKRFNSIHSIMSQVEENGMDPDS 142
           +EA +    + E G + SLVTY+ ++               +   S++ ++EE G+D   
Sbjct: 354 EEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLVREMEEEGIDAPI 413

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
             ++ ++N ++  GN E+ +  F ++KE G  P+  +Y  LI  Y   GK  +++++  +
Sbjct: 414 DIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTKMGKVSKALEVSKM 473

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           M   G +K N++TY++L+  +   K+ T A+ V   +   G+KPDVV YN I  A+   G
Sbjct: 474 MESAG-IKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVLYNNIIKAFCGMG 532

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
             D+A  ++ EM+    +P  RT   II G+ + G+++ AL     M+  G  P +  FN
Sbjct: 533 NMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFN 592

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            L+ G VE    +   E+L  M    V+PD  TY+TIMN ++  G   K  E F  +   
Sbjct: 593 ALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNE 652

Query: 383 GIKPDA-----------------------------------HAYSILAKGYVREQEPEKA 407
           G++ D                                      Y+IL  G+ R  +  +A
Sbjct: 653 GLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILIDGWARRGDVWEA 712

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            +L+  M + G  P++  +T+ I+  C  G M RA +   +M   GV PN+KT+ TL+ G
Sbjct: 713 ADLMQQMKQEGVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHG 772

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTF--LLLAEARRAT 506
           ++ A  P +A    + MK  G+ P K+ +  L+ +   RAT
Sbjct: 773 WACASLPEKALRCFEEMKLAGLKPDKAVYHCLMTSLLSRAT 813



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/372 (26%), Positives = 189/372 (50%), Gaps = 1/372 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S   L+N   + GK  +A  +   +   G K ++ TY+ L+      K + +  ++ 
Sbjct: 447 SVISYGCLINMYTKMGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVF 506

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             V ++G+ PD + +N +I AF   GNM+ A+    +M++    PT+ T+  +I G+  A
Sbjct: 507 EDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARA 566

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+   ++++ D+M R G + P + T+N LV     ++ + +A  ++ +MA +G+ PD  T
Sbjct: 567 GEMRRALEIFDMMRRSGCI-PTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHT 625

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y TI   YA  G+  +A E   ++ + G++ +  T   ++   CK G+++ AL   R M 
Sbjct: 626 YTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMS 685

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              +  N  ++N+LI G+    D     +++  MK+  V PD+ TY++ +NA   AG M 
Sbjct: 686 AQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQEGVQPDIHTYTSFINACCKAGDML 745

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  +   +M   G+KP+   Y+ L  G+     PEKA      M  +G  P+  ++  ++
Sbjct: 746 RATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKALRCFEEMKLAGLKPDKAVYHCLM 805

Query: 431 SGWCSDGSMDRA 442
           +   S  ++  A
Sbjct: 806 TSLLSRATVAEA 817



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/451 (24%), Positives = 207/451 (45%), Gaps = 43/451 (9%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           +P+  QA+ +   E   KP+   +  ++     +   +        +   G+ P S  + 
Sbjct: 283 QPENWQAVVSAF-ERIKKPARREFGLMVGYYARRGDMHRARQTFESMRVRGIYPSSHVYT 341

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK------LL 200
           ++I+A++   +MEEA+    KMKE G+  +  TY+ ++ G+   G  ++S        L+
Sbjct: 342 SLIHAYAVGRDMEEALSCVRKMKEEGVEMSLVTYSIVVGGFAKIGNADQSCNMDRAESLV 401

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
             M  EG   P +  Y+ ++  +    N  +   V  ++   G  P V++Y  +   Y +
Sbjct: 402 REMEEEGIDAP-IDIYHTMMNGYTMIGNEEKCLIVFKRLKECGFAPSVISYGCLINMYTK 460

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
            G+  +A EV   ME  G++ N +T  ++I+G+ K      A      + + G+ P++V+
Sbjct: 461 MGKVSKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWTNAFTVFEDVIKDGLKPDVVL 520

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           +N +IK F  + + D    ++  M++ R  P   T+  I++ ++ AG M +  EIFD M 
Sbjct: 521 YNNIIKAFCGMGNMDRAIHMVKEMQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMR 580

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
           ++G  P  H ++ L  G V +++ EKA E+L  M  +G  P+   +TTI++G+ + G   
Sbjct: 581 RSGCIPTVHTFNALVLGLVEKRQMEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTG 640

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMW---------------------------------- 466
           +A E F K+   G+  ++ T+E L+                                   
Sbjct: 641 KAFEYFTKLRNEGLELDVFTYEALLKACCKSGRMQSALAVTREMSAQNIPRNTFVYNILI 700

Query: 467 -GYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            G++     W A +++Q MK  GV P   T+
Sbjct: 701 DGWARRGDVWEAADLMQQMKQEGVQPDIHTY 731



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 155/325 (47%), Gaps = 32/325 (9%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K+  R T R+   +++     G+ + A  IF+ +   G  P++ T+  L+  L  +++
Sbjct: 544 MQKKRHRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRQ 603

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 I+ ++   G+ PD   +  ++N ++  G+  +A + F K++  GL     TY  
Sbjct: 604 MEKAVEILDEMALAGVSPDEHTYTTIMNGYAALGDTGKAFEYFTKLRNEGLELDVFTYEA 663

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+K    +G+ + ++ +   MS + N+  N   YN+L+  W    ++ EA ++M +M   
Sbjct: 664 LLKACCKSGRMQSALAVTREMSAQ-NIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQE 722

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G++PD+ TY +   A  + G+  +A + I EME  GV+PN +T   +I G+      ++A
Sbjct: 723 GVQPDIHTYTSFINACCKAGDMLRATKTIQEMEALGVKPNVKTYTTLIHGWACASLPEKA 782

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           LR    MK  G+ P+  +++ L+                           +++ +T+  A
Sbjct: 783 LRCFEEMKLAGLKPDKAVYHCLMT-------------------------SLLSRATVAEA 817

Query: 363 WSTAGFMDKCKEIFD-----DMGKA 382
           +  +G +  C+E+ +     DMG A
Sbjct: 818 YIYSGILSICREMIESELTVDMGTA 842


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 201/398 (50%), Gaps = 2/398 (0%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G+K S  T   LL+A   +K+    + +          PDSI ++ +IN F ++ + ++A
Sbjct: 127 GYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQA 186

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
                +M++ G+ P  + YNT+IKG    G+ + ++     M R  N  P++ TY +LV 
Sbjct: 187 YRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR--NCAPSVITYTILVD 244

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
           A C    I++A  ++  M  +G  P+VVTYNT+   + + G  D+A  +  +M  N   P
Sbjct: 245 ALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSP 304

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T  I+I GYCK+ + ++  +  + M +YG  PN + +N L+   V+         + 
Sbjct: 305 DVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLA 364

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
            +M      P   T++ +++ +   G +D   E+F  M   G  PD + Y+I+  G  R 
Sbjct: 365 QMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRA 424

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
              + A +LL  M E+G  P+VV + +I+SG C    +D A EV++ +   G   ++ T 
Sbjct: 425 NRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTC 484

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
            TL+ G  ++R+   AE++L+ M+  G  P    + +L
Sbjct: 485 STLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTIL 522



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 213/432 (49%), Gaps = 9/432 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N   + G   EA  +FN ++E    P + TY  L+     Q+R      ++ 
Sbjct: 271 VVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQ 330

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G +P+ I +N ++++  +SG   +A +    M      P+  T+N +I  +   G
Sbjct: 331 EMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVG 390

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + + +L  LM+  G + P++ TYN+++   C    I +A  ++ +M  +G  PDVVTY
Sbjct: 391 QLDLAYELFQLMTDRGCL-PDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTY 449

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N+I +   +  + D+A EV   + + G   +  TC  +I G CK  ++ +A +  R M+ 
Sbjct: 450 NSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMER 509

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWS-TAG 367
            G  P++V + +LI GF +    D +D+ LA   E       P VITYS +++    +A 
Sbjct: 510 NGSAPDVVAYTILIHGFCKA---DQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSAR 566

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
             D C  +   M + G+ PDA  Y+ +  G  +    ++A EL   M ++G  P VV + 
Sbjct: 567 VRDGCM-LLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYN 625

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            ++   C    +D AI + + M   G  P+  T+ ++  G+ ++ +  +A  + Q MK+ 
Sbjct: 626 VLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSR 685

Query: 488 GVHPQKSTFLLL 499
           G  P    + LL
Sbjct: 686 GCSPTPFMYSLL 697



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 207/453 (45%), Gaps = 35/453 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L + G+   A   + ++ +    PS++TYT L+ AL    R +    I+  + E G
Sbjct: 208 IIKGLCDNGRVDSALVHYRDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAG 266

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + +N +IN F + GNM+EA+  F +M E+  +P   TYN LI GY    +P++  
Sbjct: 267 CAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGA 326

Query: 198 KLLDLMSREG----------------------------------NVKPNLRTYNVLVRAW 223
           KLL  M + G                                  + KP+  T+N+++  +
Sbjct: 327 KLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMF 386

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C    +  A+ +   M   G  PD+ TYN + +   +    D A +++  M   G  P+ 
Sbjct: 387 CKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDV 446

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T   I+SG CK  ++ EA      ++  G   ++V  + LI G  +    D  +++L  
Sbjct: 447 VTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLRE 506

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M+     PDV+ Y+ +++ +  A  +DK    F +M   G  P    YSI+     +   
Sbjct: 507 MERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSAR 566

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
                 LL TM+E G  P+ +++T++I G C   S D A E++  M + G +P + T+  
Sbjct: 567 VRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNV 626

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           L+    +  +   A  +L++M++ G  P   T+
Sbjct: 627 LVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTY 659



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 205/424 (48%), Gaps = 2/424 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++ + + K QEA  +F N   G   P  +TY+TL+      + F   + ++ ++E+ G
Sbjct: 138 LLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 197

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P +  +N +I    ++G ++ A+  +  M+ +   P+  TY  L+     + +  ++ 
Sbjct: 198 IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRN-CAPSVITYTILVDALCKSARISDAS 256

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L+ M  E    PN+ TYN L+  +C   N+ EA  + ++M  +   PDV TYN +   
Sbjct: 257 LILEDMI-EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 315

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y +        +++ EM   G +PN  T   ++    K GK  +A   A+ M      P+
Sbjct: 316 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 375

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              FNL+I  F ++   D   E+  LM +    PD+ TY+ +++    A  +D  +++ +
Sbjct: 376 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 435

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M +AG  PD   Y+ +  G  +  + ++A E+   +   G+  +VV  +T+I G C   
Sbjct: 436 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 495

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D A ++  +M  +G +P++  +  L+ G+ +A Q  ++      M   G  P   T+ 
Sbjct: 496 RLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYS 555

Query: 498 LLAE 501
           ++ +
Sbjct: 556 IVID 559



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 188/389 (48%), Gaps = 3/389 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   ++ +PQ+   +   +++ G +P+ +TY TL+ +L    ++    ++   +    
Sbjct: 312 LIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRD 371

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P    FN +I+ F + G ++ A + F  M + G  P   TYN +I G   A + +++ 
Sbjct: 372 CKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDAR 431

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL+ M+ E    P++ TYN +V   C    + EA+ V   +   G   DVVT +T+   
Sbjct: 432 QLLERMT-EAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDG 490

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             ++   D AE+++ EME NG  P+     I+I G+CK  ++ ++L F   M + G  P 
Sbjct: 491 LCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPT 550

Query: 318 LVIFNLLIKGFVEIMD-RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++ ++++I    +    RDG   +L  M E  V PD I Y+++++    +   D+  E++
Sbjct: 551 VITYSIVIDKLCKSARVRDGC-MLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELY 609

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             M + G  P    Y++L     +    ++A  LL  M   G  P+ V + ++  G+   
Sbjct: 610 KLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKS 669

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
              D+A  +F  M   G SP    +  L+
Sbjct: 670 AEHDKAFRLFQAMKSRGCSPTPFMYSLLL 698



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/327 (25%), Positives = 157/327 (48%), Gaps = 3/327 (0%)

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +++VK  D  + +   K +  T N L+ A+  +K   EA+++          PD +TY+T
Sbjct: 113 DKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYST 172

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + +  +  QA  ++ EME  G+ P+      II G C  G++  AL   R M+   
Sbjct: 173 LINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQR-N 231

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P+++ + +L+    +         +L  M E    P+V+TY+T++N +   G MD+  
Sbjct: 232 CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAV 291

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F+ M +    PD   Y+IL  GY +++ P+   +LL  M++ G  PN + + T++   
Sbjct: 292 VLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSL 351

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G    A  +   M      P+  TF  ++  + +  Q   A E+ Q+M   G  P  
Sbjct: 352 VKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDI 411

Query: 494 STF-LLLAEARRATGLTKEAKRILSKI 519
            T+ ++++ A RA  +  +A+++L ++
Sbjct: 412 YTYNIMISGACRANRI-DDARQLLERM 437



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 33/184 (17%), Positives = 86/184 (46%), Gaps = 1/184 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ++K    TV + + +++ L +  + ++   +   ++E G  P  + YT+++  L     +
Sbjct: 543 LDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSY 602

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +  + +   +++ G  P  + +N +++   +   ++EA+     M+  G  P T TYN++
Sbjct: 603 DEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSV 662

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
             G+  + + +++ +L   M   G   P    Y++L+     E+ + +A  +  +   +G
Sbjct: 663 FDGFWKSAEHDKAFRLFQAMKSRG-CSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAG 721

Query: 244 MKPD 247
              D
Sbjct: 722 ADVD 725


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  201 bits (512), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 212/442 (47%), Gaps = 2/442 (0%)

Query: 81  SLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDP 140
           +L+  G+  + +  F  L   G +P    +   + A            ++ ++  +G  P
Sbjct: 1   ALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPP 60

Query: 141 DSIF-FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
            + F +N VI     +G   +A++ F +M E  + P   TYNT+I G+   G  E   +L
Sbjct: 61  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 120

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
            D M   G +KPN  TYNVL+   C    + E   ++ +MA+  M PD  TY+ +    +
Sbjct: 121 RDQMVCHG-LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 179

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +NG++     +  +   NGV     TC I+++G CK+GK+  A    +++   G+ P  V
Sbjct: 180 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 239

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           I+N LI G+ +  + +G       MK   + PD ITY+ ++N    A  +   +++  +M
Sbjct: 240 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 299

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G+ P    ++ L   Y R  + EK   +L  M E+G  PNVV + +I++ +C +G +
Sbjct: 300 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 359

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             A+ + D M    V PN + +  ++  Y E     +A  +++ MK+ G+ P   T+ LL
Sbjct: 360 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 419

Query: 500 AEARRATGLTKEAKRILSKIKN 521
            +         EA+ I++ + N
Sbjct: 420 IKGLCNQSQISEAEEIINSLSN 441



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 197/407 (48%), Gaps = 1/407 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L   G+  E  A+ + +      P   TY+ L   L+      ++ S+  +  +NG
Sbjct: 139 LLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNG 198

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +       + ++N   + G +  A +    +  +GL PT   YNTLI GY   G+ E + 
Sbjct: 199 VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAF 258

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M +  ++KP+  TYN L+   C  + IT A +++ +M  +G+ P V T+NT+  A
Sbjct: 259 STFGQM-KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 317

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G+ ++   V+ EM+ NG++PN  + G I++ +CK GKI EA+     M    V PN
Sbjct: 318 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 377

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             ++N +I  +VE    D    ++  MK   ++P ++TY+ ++        + + +EI +
Sbjct: 378 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 437

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +    + PDA +Y+ L          +KA +L   M + G    V  +  +ISG    G
Sbjct: 438 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 497

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            ++    ++ KM ++ V P+      ++  YS+     +AE++ + M
Sbjct: 498 RLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 544



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 219/455 (48%), Gaps = 11/455 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++  I+ G  +    + + ++  G KP+ +TY  LL+ L    R     +++ ++    
Sbjct: 104 MIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 163

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M PD   ++ + +  S +G+ +  +  F K  ++G+T    T + L+ G    GK   + 
Sbjct: 164 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAE 223

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L  +   G V P    YN L+  +C    +  A++   +M +  +KPD +TYN +   
Sbjct: 224 EVLQSLVNAGLV-PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALING 282

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +      A+++++EM+ NGV P   T   +I  Y + G++++       M+E G+ PN
Sbjct: 283 LCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 342

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKE 374
           +V +  ++  F +      + E +A++ +     V P+   Y+ I++A+   G  D+   
Sbjct: 343 VVSYGSIVNAFCK---NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFI 399

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + + M   GI P    Y++L KG   + +  +AEE++ ++      P+ V + T+IS  C
Sbjct: 400 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC 459

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G++D+A+++  +M ++G+   ++T+  L+ G   A +    E + Q M    V P  +
Sbjct: 460 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 519

Query: 495 TFLLLAEARRATGLTKEA----KRILSKIKNKERT 525
              ++ EA    G   +A    K +L K  N + T
Sbjct: 520 IHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDDT 554



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 118/227 (51%), Gaps = 1/227 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+++    G+ ++   + + + E G KP++V+Y +++ A     +     +I+
Sbjct: 307 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 366

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +    + P++  +NA+I+A+ E G  ++A     KMK +G++P+  TYN LIKG    
Sbjct: 367 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 426

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +  E+ ++++ +S    + P+  +YN L+ A C   NI +A ++  +M   G+K  V T
Sbjct: 427 SQISEAEEIINSLSNH-RLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRT 485

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           Y+ + +     G  ++ E +  +M  N V P+     I++  Y K G
Sbjct: 486 YHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 532



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/286 (22%), Positives = 117/286 (40%), Gaps = 36/286 (12%)

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP-NGRTCGIIISGYCKEG 297
           +A++G +PD   +N    A    G+  +A  ++  M  +G  P N  +  ++I+G  + G
Sbjct: 18  LASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAG 77

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
           +  +A                          VE+ D          M E  V P+ ITY+
Sbjct: 78  RGGDA--------------------------VEVFDE---------MTERAVLPNHITYN 102

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           T+++     G ++    + D M   G+KP+A  Y++L  G  R     +   LL  M   
Sbjct: 103 TMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQ 162

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
              P+   ++ +  G   +G     + +F K  ++GV+    T   L+ G  +  +   A
Sbjct: 163 KMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIA 222

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           EE+LQ +   G+ P +  +  L      TG  + A     ++K++ 
Sbjct: 223 EEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 268


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 217/416 (52%), Gaps = 1/416 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L  +G+  +A    + L+  G K   V+Y TL+  +           ++ ++
Sbjct: 131 TFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKI 190

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +     P+   +N +I+A  +   + EA   F +M   G++    TY TLI G+ IA K 
Sbjct: 191 DGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKL 250

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E++ LL+ M  +  + PN+ TYN+LV A C E  + EA NV+  M  + +KPDV+TY+T
Sbjct: 251 KEAIGLLNEMVLK-TINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYST 309

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    E  +A+ V   M   GV P+  +  I+I+G+CK   + EAL   + M +  
Sbjct: 310 LMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKN 369

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P +V ++ LI G  +      V +++  M++  +  +VITY+++++     G +D+  
Sbjct: 370 MVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAI 429

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F+ M   GI+P +  ++IL  G  +    + A+E    ++  G+H +V  +  +I+G 
Sbjct: 430 ALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGH 489

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           C  G ++ A+ +  KM E+G  PN  TF+ ++    +  +  +AE++L+ M   G+
Sbjct: 490 CKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 210/433 (48%), Gaps = 1/433 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A + FN ++   H P ++ +  +L +    K +++  S+  ++E  G+ PD I  N +I
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILI 101

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N F   G +        K+ + G  P T T+ TLIKG  + G+  +++   D +  +G +
Sbjct: 102 NCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG-I 160

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           K +  +Y  L+   C   +   A  ++ K+     KP+V  YNTI  A  +     +A  
Sbjct: 161 KFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYG 220

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  EM   G+  +  T   +I G+C   K+KEA+     M    ++PN+  +N+L+    
Sbjct: 221 LFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALC 280

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +         VLA+M +  V PDVITYST+M+ +     + K + +F+ M   G+ PD H
Sbjct: 281 KEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVH 340

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           +Y+IL  G+ + +  ++A  L   M +    P +V ++++I G C  G +    ++ D+M
Sbjct: 341 SYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEM 400

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
            + G+  N+ T+ +L+ G  +     RA  +   MK  G+ P   TF +L +     G  
Sbjct: 401 RDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRL 460

Query: 510 KEAKRILSKIKNK 522
           K+A+     +  K
Sbjct: 461 KDAQEAFQDLLTK 473



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 71/331 (21%), Positives = 135/331 (40%), Gaps = 35/331 (10%)

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           +N+ +A +  ++M      P ++ +N I  ++A+      A  +   +E  G+QP+  T 
Sbjct: 38  QNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITL 97

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF------------------ 328
            I+I+ +C  G+I         + + G  P+ + F  LIKG                   
Sbjct: 98  NILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLA 157

Query: 329 -----------------VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
                             +I D  G  +++  +      P+V  Y+TI++A      + +
Sbjct: 158 QGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSE 217

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F +M   GI  D   Y+ L  G+    + ++A  LL  M+    +PNV  +  ++ 
Sbjct: 218 AYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVD 277

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             C +G +  A  V   M +  V P++ T+ TLM GY    +  +A+ +   M   GV P
Sbjct: 278 ALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTP 337

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              ++ +L        +  EA  +  ++  K
Sbjct: 338 DVHSYTILINGFCKNKMVDEALNLFKEMHQK 368



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 37/136 (27%), Positives = 61/136 (44%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L + G    A A+FN + + G +P   T+T LL  L    R         
Sbjct: 409 VITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQ 468

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G   D   +N +IN   + G +EEA+    KM+E+G  P   T++ +I       
Sbjct: 469 DLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKD 528

Query: 192 KPEESVKLLDLMSREG 207
           + +++ KLL  M   G
Sbjct: 529 ENDKAEKLLRQMICRG 544


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 222/444 (50%), Gaps = 1/444 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++ L    K  EA A+ + +++ G +P+LVTY  ++  L  +   +   ++++++
Sbjct: 154 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKM 213

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E   ++ D + FN +I++  +  ++++A++ F +M+  G+ P   TY++LI      G+ 
Sbjct: 214 EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRW 273

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ +LL  M  E  + PNL T+N L+ A+  E    EA  +   M    + PD+ TYN+
Sbjct: 274 SDASQLLSDMI-EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNS 332

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +  +   D+A+++   M      P+  T   +I G+CK  ++++     R M   G
Sbjct: 333 LVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRG 392

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           +  + V +  LI+G     D D   +V   M    V PD++TYS +++     G ++K  
Sbjct: 393 LVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKAL 452

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+FD M K+ IK D + Y+ + +G  +  + +   +L  ++   G  PNVV + T+ISG 
Sbjct: 453 EVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 512

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           CS   +  A  +  KM E G  PN  T+ TL+  +        + E+++ M++       
Sbjct: 513 CSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 572

Query: 494 STFLLLAEARRATGLTKEAKRILS 517
           ST  L+A       L K    +LS
Sbjct: 573 STIGLVANMLHDGRLDKSFLDMLS 596



 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 225/444 (50%), Gaps = 3/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N    R +   A A+   +++ G++PS+VT ++LL      KR +   +++ Q+ E G
Sbjct: 88  LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 147

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD+I F  +I+         EA+    +M + G  P   TY  ++ G    G  + ++
Sbjct: 148 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 207

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ M     ++ ++  +N ++ + C  +++ +A N+  +M   G++P+VVTY+++ + 
Sbjct: 208 NLLNKM-EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 266

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G    A +++ +M    + PN  T   +I  + KEGK  EA +    M +  + P+
Sbjct: 267 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 326

Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +  +N L+ GF  + DR D   ++   M      PDV+TY+T++  +  +  ++   E+F
Sbjct: 327 IFTYNSLVNGFC-MHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 385

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M   G+  D   Y+ L +G   + + + A+++   M+  G  P+++ ++ ++ G C++
Sbjct: 386 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 445

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +++A+EVFD M +  +  ++  + T++ G  +A +     ++   +   GV P   T+
Sbjct: 446 GKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTY 505

Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
             +     +  L +EA  +L K+K
Sbjct: 506 NTMISGLCSKRLLQEAYALLKKMK 529



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 218/437 (49%), Gaps = 1/437 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +++ L+N      +  +A A+ + ++E G++P  +T+TTL+  L +  + +   +++
Sbjct: 116 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 175

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G  P+ + +  V+N   + G+ + A++   KM+ + +      +NT+I      
Sbjct: 176 DRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKY 235

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              ++++ L   M  +G ++PN+ TY+ L+   C+    ++A  ++  M    + P++VT
Sbjct: 236 RHVDDALNLFKEMETKG-IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVT 294

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +N +  A+ + G+  +AE++  +M    + P+  T   +++G+C   ++ +A +    M 
Sbjct: 295 FNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 354

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                P++V +N LIKGF +    +   E+   M    +  D +TY+T++      G  D
Sbjct: 355 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 414

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             +++F  M   G+ PD   YSIL  G     + EKA E+   M +S    ++ I+TT+I
Sbjct: 415 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 474

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C  G +D   ++F  +   GV PN+ T+ T++ G    R    A  +L+ MK  G  
Sbjct: 475 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 534

Query: 491 PQKSTFLLLAEARRATG 507
           P   T+  L  A    G
Sbjct: 535 PNSGTYNTLIRAHLRDG 551



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 214/437 (48%), Gaps = 1/437 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A  +F  +++    PS+V +  LL+A+   K+F+ + S+  +++   +      +N
Sbjct: 27  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN F     +  A+    KM + G  P+  T ++L+ GY    +  ++V L+D M   
Sbjct: 87  ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +P+  T+  L+         +EA  ++ +M   G +P++VTY  +     + G+ D 
Sbjct: 147 G-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDL 205

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  ++ +ME   ++ +      II   CK   + +AL   + M+  G+ PN+V ++ LI 
Sbjct: 206 ALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLIS 265

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
                       ++L+ M E ++NP+++T++ +++A+   G   + ++++DDM K  I P
Sbjct: 266 CLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDP 325

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   Y+ L  G+      +KA+++   M+     P+VV + T+I G+C    ++   E+F
Sbjct: 326 DIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELF 385

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            +M   G+  +  T+ TL+ G         A+++ + M + GV P   T+ +L +     
Sbjct: 386 REMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNN 445

Query: 507 GLTKEAKRILSKIKNKE 523
           G  ++A  +   ++  E
Sbjct: 446 GKLEKALEVFDYMQKSE 462



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 118/228 (51%), Gaps = 1/228 (0%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F ++K+    V +   L+    +  + ++   +F  +   G     VTYTTL+  L    
Sbjct: 352 FMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDG 411

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
             ++   +  Q+  +G+ PD + ++ +++    +G +E+A++ F  M++S +      Y 
Sbjct: 412 DCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYT 471

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           T+I+G   AGK ++   L   +S +G VKPN+ TYN ++   C+++ + EA+ ++ KM  
Sbjct: 472 TMIEGMCKAGKVDDGWDLFCSLSLKG-VKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 530

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
            G  P+  TYNT+  A+ ++G+   + E+I EM       +  T G++
Sbjct: 531 DGPLPNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIGLV 578


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 135/461 (29%), Positives = 232/461 (50%), Gaps = 15/461 (3%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M KE C     + + L+N L   G+  EA  +   +IE G +P++ TYT  + AL   + 
Sbjct: 259 MVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEH 318

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +++++++ G  P+   + A+I+  S  G +E A+  + KM + GL P T TYN 
Sbjct: 319 EEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNA 378

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI    + G+   ++K+   M   G++  N +TYN +++  C   +I +A  +  KM   
Sbjct: 379 LINELCVGGRFSTALKIFHWMEGHGSLA-NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKM 437

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P VVTYNT+   Y   G  + A  ++  M+ NG +P+  T   ++SG+ K GK++ A
Sbjct: 438 GPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESA 497

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMK---EFRVNPDVITYST 358
             + + M E G++PN V +  LI G      +DG VD  L+L+K   E   NP+V +Y+ 
Sbjct: 498 SFYFQEMVECGLNPNPVSYTALIDGH----SKDGKVDIALSLLKRMEEMGCNPNVESYNA 553

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++N  S      + ++I D M + G+ P+   Y+ L  G  R    + A ++   M +  
Sbjct: 554 VINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRK 613

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PN+  ++++I G C +G  D A  +  +M   G++P+  TF +L+ G+    +   A 
Sbjct: 614 CLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAF 673

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            +L+ M   G  P   T+ +L +     GL KE   +  KI
Sbjct: 674 LLLRRMVDMGCKPNYRTYSVLLK-----GLQKECLLLEEKI 709



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 222/452 (49%), Gaps = 1/452 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   L+N L ++GK +EA+ I + + +    P + TYT+L+      +  +    + 
Sbjct: 197 SLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVF 256

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G DP+S+ ++ +IN     G ++EA+D   +M E G+ PT  TY   I      
Sbjct: 257 DRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAI 316

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              EE+++L+  M + G  +PN++TY  L+        +  A  + HKM   G+ P+ VT
Sbjct: 317 EHEEEAIELVARMKKRG-CRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVT 375

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +       G    A ++   ME +G   N +T   II G C  G I++A+     M 
Sbjct: 376 YNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKML 435

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G  P +V +N LI G++   + +    +L LMKE    PD  TY+ +++ +S  G ++
Sbjct: 436 KMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLE 495

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                F +M + G+ P+  +Y+ L  G+ ++ + + A  LL  M E G +PNV  +  +I
Sbjct: 496 SASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVI 555

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G   +     A ++ DKM E G+ PN+ T+ TL+ G     +   A +I   M+     
Sbjct: 556 NGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCL 615

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+  L       G   EA+ +L +++ K
Sbjct: 616 PNLYTYSSLIYGLCQEGKADEAEILLKEMERK 647



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 222/433 (51%), Gaps = 1/433 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+ ++  ++  G +PSL+T+ TL+  L+ + +      I+SQ+ +  + PD   + ++I 
Sbjct: 182 ARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLIL 241

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
               + N++ A   F +M + G  P + TY+TLI G    G+ +E++ +L+ M  +G ++
Sbjct: 242 GHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKG-IE 300

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P + TY + + A C  ++  EA  ++ +M   G +P+V TY  + +  ++ G+ + A  +
Sbjct: 301 PTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGL 360

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             +M   G+ PN  T   +I+  C  G+   AL+    M+ +G   N   +N +IKG   
Sbjct: 361 YHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCL 420

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
             D +    +   M +    P V+TY+T++N + T G ++    + D M + G +PD   
Sbjct: 421 GGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWT 480

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ L  G+ +  + E A      M+E G +PN V +T +I G   DG +D A+ +  +M 
Sbjct: 481 YNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRME 540

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E G +PN++++  ++ G S+  +   AE+I   M   G+ P   T+  L +     G T+
Sbjct: 541 EMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQ 600

Query: 511 EAKRILSKIKNKE 523
            A +I   ++ ++
Sbjct: 601 FAFKIFHDMEKRK 613



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 144/313 (46%), Gaps = 8/313 (2%)

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           +L + N L+      + +  A N+  +M  SG++P ++T+NT+    ++ G+  +AE ++
Sbjct: 162 SLYSCNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELIL 221

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL-RFARTMKEYGVHPNLVIFNLLIKGFVE 330
            ++    + P+  T   +I G+C+   +  A   F R +KE G  PN V ++ LI G   
Sbjct: 222 SQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKE-GCDPNSVTYSTLING--- 277

Query: 331 IMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           + +   VDE L +++E     + P V TY+  + A       ++  E+   M K G +P+
Sbjct: 278 LCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPN 337

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ L  G  R  + E A  L   M++ G  PN V +  +I+  C  G    A+++F 
Sbjct: 338 VQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFH 397

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            M  HG   N +T+  ++ G        +A  + + M   G  P   T+  L       G
Sbjct: 398 WMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKG 457

Query: 508 LTKEAKRILSKIK 520
               A R+L  +K
Sbjct: 458 NVNNAARLLDLMK 470



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 67/269 (24%), Positives = 137/269 (50%)

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + +L+ + R+    P      ++++A  NE+ I    + +++++  G    + + NT+  
Sbjct: 112 ISMLNRLVRDRVFAPADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLI 171

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
             A+    + A  +  +M ++G+QP+  T   +I+   K+GK++EA      + +Y + P
Sbjct: 172 QLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSP 231

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++  +  LI G     + D    V   M +   +P+ +TYST++N     G +D+  ++ 
Sbjct: 232 DVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDML 291

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M + GI+P  + Y++        +  E+A EL+  M + G  PNV  +T +ISG    
Sbjct: 292 EEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRL 351

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           G ++ AI ++ KM + G+ PN  T+  L+
Sbjct: 352 GKLEVAIGLYHKMLKEGLVPNTVTYNALI 380



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/227 (23%), Positives = 106/227 (46%), Gaps = 6/227 (2%)

Query: 288 IIISGYCK-EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
           I++   C+ E +I+    F   +   G   +L   N L+    +    +G   +   M  
Sbjct: 132 ILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNLYKQMLN 191

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             + P ++T++T++N  S  G + + + I   + +  + PD   Y+ L  G+ R +  + 
Sbjct: 192 SGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDL 251

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  +   M++ G  PN V ++T+I+G C++G +D A+++ ++M E G+ P + T+   + 
Sbjct: 252 AFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPIT 311

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
                     A E++  MK  G  P   T+  L      +GL++  K
Sbjct: 312 ALCAIEHEEEAIELVARMKKRGCRPNVQTYTAL-----ISGLSRLGK 353


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 216/437 (49%), Gaps = 2/437 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +  KL+  L ++G  +E + + + +I+ G  P+L TY   +  L  +   +    ++ 
Sbjct: 216 LSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVG 275

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + E G  PD I +N +I    ++   +EA     KM   GL P + TYNTLI GY   G
Sbjct: 276 CLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGG 335

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + + +++      G V P+  TY  L+   C+E     A  + ++    G+KP+V+ Y
Sbjct: 336 MVQLAERIVGDAVFNGFV-PDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+    +  G   +A ++  EM   G+ P  +T  I+++G CK G + +A    + M  
Sbjct: 395 NTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P++  FN+LI G+   +  +   E+L +M +  V+PDV TY++++N        + 
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFED 514

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E +  M + G  P+   ++IL +   R ++ ++A  LL  M     +P+ V F T+I 
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLID 574

Query: 432 GWCSDGSMDRAIEVFDKMCE-HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           G+C +G +D A  +F KM E + VS +  T+  ++  ++E      AE++ Q M    + 
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634

Query: 491 PQKSTFLLLAEARRATG 507
           P   T+ L+ +    TG
Sbjct: 635 PDGYTYRLMVDGFCKTG 651



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 222/455 (48%), Gaps = 7/455 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV S   +M+ L++ G   +A  ++  + + G  P + ++T  + +     R ++   ++
Sbjct: 110 TVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLL 169

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + +   G + + + +  V+  F E     E  + F KM  SG++   ST+N L++     
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKK 229

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +E  KLLD + + G V PNL TYN+ ++  C    +  A  ++  +   G KPDV+T
Sbjct: 230 GDVKECEKLLDKVIKRG-VLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVIT 288

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +     +N +  +AE  + +M + G++P+  T   +I+GYCK G ++ A R      
Sbjct: 289 YNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAV 348

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
             G  P+   +  LI G          +  LAL  E     + P+VI Y+T++   S  G
Sbjct: 349 FNGFVPDQFTYRSLIDGLCH---EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            + +  ++ ++M + G+ P+   ++IL  G  +      A+ L+  MI  G+ P++  F 
Sbjct: 406 MILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +I G+ +   M+ A+E+ D M ++GV P++ T+ +L+ G  +  +     E  + M   
Sbjct: 466 ILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEK 525

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G  P   TF +L E+        EA  +L ++KNK
Sbjct: 526 GCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNK 560



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 201/425 (47%), Gaps = 8/425 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+  L +  K QEA+     ++  G +P   TY TL+A             I+ 
Sbjct: 286 VITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVG 345

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
               NG  PD   + ++I+     G    A+  F +    G+ P    YNTLIKG    G
Sbjct: 346 DAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E+ +L + MS +G + P ++T+N+LV   C    +++A  ++  M + G  PD+ T+
Sbjct: 406 MILEAAQLANEMSEKGLI-PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y+   + + A E++  M  NGV P+  T   +++G CK  K ++ +   +TM E
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            G  PNL  FN+L++          +DE L L++E +   VNPD +T+ T+++ +   G 
Sbjct: 525 KGCAPNLFTFNILLESLCRYRK---LDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 369 MDKCKEIFDDMGKA-GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
           +D    +F  M +A  +      Y+I+   +  +     AE+L   M++    P+   + 
Sbjct: 582 LDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            ++ G+C  G+++   +   +M E+G  P+L T   ++       + + A  I+  M   
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701

Query: 488 GVHPQ 492
           G+ P+
Sbjct: 702 GLVPE 706



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/478 (23%), Positives = 229/478 (47%), Gaps = 13/478 (2%)

Query: 88  PQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDP--DSIF 144
           P +A  +FN++  E G K +L TY +++  L    +F ++  ++  + EN  +   + ++
Sbjct: 20  PMKALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGVY 79

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
             A+ N +   G ++EA++ F +M      PT  +YN ++     +G  +++ K+   M 
Sbjct: 80  VGAMKN-YGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRM- 137

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R+  + P++ ++ + ++++C       A  +++ M++ G + +VV Y T+   + +    
Sbjct: 138 RDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFK 197

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +  E+  +M  +GV     T   ++   CK+G +KE  +    + + GV PNL  +NL 
Sbjct: 198 AEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLF 257

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I+G  +  + DG   ++  + E    PDVITY+ ++          + +     M   G+
Sbjct: 258 IQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGL 317

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           +PD++ Y+ L  GY +    + AE ++   + +GF P+   + ++I G C +G  +RA+ 
Sbjct: 318 EPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALA 377

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           +F++    G+ PN+  + TL+ G S       A ++   M   G+ P+  TF +L     
Sbjct: 378 LFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLC 437

Query: 505 ATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVV 562
             G   +A  ++  + +K    +        + +   L H  +T     N L+I +V+
Sbjct: 438 KMGCVSDADGLVKVMISKGYFPD--------IFTFNILIHGYSTQLKMENALEILDVM 487



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/283 (23%), Positives = 121/283 (42%), Gaps = 35/283 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++   L+N L + G   +A  +   +I  G+ P + T+  L+   + Q +  +   I+ 
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN---------- 181
            + +NG+DPD   +N+++N   ++   E+ M+T+  M E G  P   T+N          
Sbjct: 486 VMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYR 545

Query: 182 -------------------------TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
                                    TLI G+   G  + +  L   M     V  +  TY
Sbjct: 546 KLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTY 605

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N+++ A+  + N+T A  +  +M    + PD  TY  +   + + G  +   + ++EM  
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMME 665

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           NG  P+  T G +I+  C E ++ EA      M + G+ P  V
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 33/179 (18%), Positives = 64/179 (35%), Gaps = 39/179 (21%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           L++   + G    A  +F  + E      S  TY  ++ A T +        +  ++ + 
Sbjct: 572 LIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDR 631

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            + PD   +  +++ F ++GN+        +M E+G  P+ +T   +I            
Sbjct: 632 CLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVIN----------- 680

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
                                      C E  + EA  ++H+M   G+ P+ V  NTI 
Sbjct: 681 -------------------------CLCVEDRVYEAAGIIHRMVQKGLVPEAV--NTIC 712


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 218/437 (49%), Gaps = 2/437 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +  KL++ L ++G  +E + + + +I+ G  P+L TY   +  L  +   ++   ++ 
Sbjct: 216 LSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVG 275

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G  PD + +N +I    ++   +EA     K+   GL P + TYNTLI GY   G
Sbjct: 276 RLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGG 335

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + + ++L      G V P+  TY  L+   C+E     A  + ++    G+KP+V+ Y
Sbjct: 336 MVQLAERILVNAVFNGFV-PDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILY 394

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+    +  G   +A ++  EM   G+ P  +T  I+++G CK G + +A    + M  
Sbjct: 395 NTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMIS 454

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P++  FN+LI G+   +  +   E+L +M +  V+PDV TY++++N        + 
Sbjct: 455 KGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYED 514

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E +  M + G  P+   ++IL +   R  + +KA  LL  M     +P+ V F T+I 
Sbjct: 515 VMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLID 574

Query: 432 GWCSDGSMDRAIEVFDKMCE-HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           G+C +G +D A  +F KM E + VS +  T+  ++  ++E      AE++ Q M    + 
Sbjct: 575 GFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG 634

Query: 491 PQKSTFLLLAEARRATG 507
           P   T+ L+ +    TG
Sbjct: 635 PDGYTYRLMVDGFCKTG 651



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 119/455 (26%), Positives = 222/455 (48%), Gaps = 7/455 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV S   +M+ L++ G   +A  ++  + + G  P + ++T  + +     R ++   ++
Sbjct: 110 TVFSYNAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLL 169

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + +   G + + + +  V+  F E    +E  + F KM  SG++   ST+N L+      
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKK 229

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +E  KLLD + + G V PNL TYN  ++  C +  +  A  ++ ++   G KPDVVT
Sbjct: 230 GDVKECEKLLDKVIKRG-VLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVT 288

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +     +N +  +AE  + ++ + G++P+  T   +I+GYCK G ++ A R      
Sbjct: 289 YNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAV 348

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
             G  P+   +  LI G          +  LAL  E     + P+VI Y+T++   S  G
Sbjct: 349 FNGFVPDEFTYRSLIDGLCH---EGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            + +  ++  +M + G+ P+   ++IL  G  +      A+ L+  MI  G+ P++  F 
Sbjct: 406 LILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFN 465

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +I G+ +   M+ A+E+ D M ++GV P++ T+ +L+ G  +  +     E  + M   
Sbjct: 466 ILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEK 525

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G  P   TF +L E+        +A  +L ++KNK
Sbjct: 526 GCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNK 560



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 195/422 (46%), Gaps = 2/422 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+  L +  K QEA+     L+  G +P   TY TL+A             I+ 
Sbjct: 286 VVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILV 345

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
               NG  PD   + ++I+     G    A+  F +    G+ P    YNTLIKG    G
Sbjct: 346 NAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQG 405

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E+ +L   MS +G + P ++T+N+LV   C    +++A  ++  M + G  PD+ T+
Sbjct: 406 LILEAAQLASEMSEKGLI-PEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y+   + + A E++  M  NGV P+  T   +++G CK  K ++ +   +TM E
Sbjct: 465 NILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVE 524

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PNL  FN+L++        D    +L  MK   VNPD +T+ T+++ +   G +D 
Sbjct: 525 KGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584

Query: 372 CKEIFDDMGKAG-IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              +F  M +   +      Y+I+   +  +     AE+L   M++    P+   +  ++
Sbjct: 585 AYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+C  G++D   +   +M E+G  P+L T   ++       + + A  I+  M   G+ 
Sbjct: 645 DGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704

Query: 491 PQ 492
           P+
Sbjct: 705 PE 706



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 119/530 (22%), Positives = 233/530 (43%), Gaps = 48/530 (9%)

Query: 88  PQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN---------- 136
           P +A  +FN++  E G K +L TY +++  L +  +F ++  ++  + +N          
Sbjct: 20  PMKALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGVY 79

Query: 137 --------------------------GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE 170
                                       +P    +NA+++   +SG  ++A   + +M++
Sbjct: 80  VGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYMRMRD 139

Query: 171 SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
            G+TP   ++   +K +    +P  +++LL+ MS +G  + N+  Y  +V  +  E    
Sbjct: 140 RGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQG-CEMNVVAYCTVVGGFYEENFKD 198

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
           E + +  KM ASG+   + T+N +     + G+  + E+++ ++   GV PN  T    I
Sbjct: 199 EGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFI 258

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
            G C++G++  A+R    + + G  P++V +N LI G  +       +  L  +    + 
Sbjct: 259 QGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLE 318

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           PD  TY+T++  +   G +   + I  +    G  PD   Y  L  G   E E  +A  L
Sbjct: 319 PDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALAL 378

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
               +  G  PNV+++ T+I G  + G +  A ++  +M E G+ P ++TF  L+ G  +
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCK 438

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEA 530
                 A+ ++++M + G  P   TF +L          + A  IL  +        M+ 
Sbjct: 439 MGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVM--------MDN 490

Query: 531 EEDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLL 580
             D  V +   L +    T+ Y ++++    +   +KG A  L    +LL
Sbjct: 491 GVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMV--EKGCAPNLFTFNILL 538



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/283 (23%), Positives = 121/283 (42%), Gaps = 35/283 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++   L+N L + G   +A  +   +I  G+ P + T+  L+   + Q +  +   I+ 
Sbjct: 426 VQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILD 485

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN---------- 181
            + +NG+DPD   +N+++N   ++   E+ M+T+  M E G  P   T+N          
Sbjct: 486 VMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYH 545

Query: 182 -------------------------TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
                                    TLI G+   G  + +  L   M     V  +  TY
Sbjct: 546 KLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTY 605

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N+++ A+  + N+T A  +  +M    + PD  TY  +   + + G  D   + ++EM  
Sbjct: 606 NIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMME 665

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           NG  P+  T G +I+  C E ++ EA      M + G+ P  V
Sbjct: 666 NGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708



 Score = 41.2 bits (95), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 27/146 (18%), Positives = 54/146 (36%), Gaps = 38/146 (26%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           TY  ++ A T +        +  ++ +  + PD   +  +++ F ++GN++       +M
Sbjct: 604 TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEM 663

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
            E+G  P+ +T   +I                                       C E  
Sbjct: 664 MENGFIPSLTTLGRVIN------------------------------------CLCVEDR 687

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTI 254
           + EA  ++H+M   G+ P+ V  NTI
Sbjct: 688 VYEAAGIIHRMVQKGLVPEAV--NTI 711


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 211/428 (49%), Gaps = 1/428 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +RS   L+N+LIE  K  EA++ F      G  P+L TY  L+     +K+F+    +++
Sbjct: 114 IRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLN 173

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + E G  PD   +  +IN+ +++G M +A+  F +M E G+TP  + YN LI G+   G
Sbjct: 174 WMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 233

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               + ++ + + +  +V PN+ +YNV++   C      E++ + H+M  +    D+ TY
Sbjct: 234 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 293

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +T+      +G  D A  V  EM  NGV P+      +++GY + G+I+E L   + M++
Sbjct: 294 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 353

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G    +V +N+LI+G  E    D    +  L+ E     D +TY  +++     G+++K
Sbjct: 354 EGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNK 412

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              I ++        D  AYS +  G  RE   ++   +L  M + G  PN  +   +I+
Sbjct: 413 ALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVIN 472

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+     ++ A+  F  M   G  P + T+ TL+ G S+A +   A  +++ M   G  P
Sbjct: 473 GFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKP 532

Query: 492 QKSTFLLL 499
              T+ LL
Sbjct: 533 NMITYSLL 540



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 204/420 (48%), Gaps = 3/420 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           L++   ++G    A  I+  L++G    P++ +Y  ++  L    +F+    I  ++++N
Sbjct: 225 LIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKN 284

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
               D   ++ +I+    SGN++ A   + +M E+G++P    YNT++ GY  AG+ EE 
Sbjct: 285 ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEEC 344

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++L  +M +EG     + +YN+L+R       + EA ++   +       D +TY  +  
Sbjct: 345 LELWKVMEKEGC--RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVH 402

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              +NG  ++A  ++ E E+     +      +I+G C+EG++ E       M ++G  P
Sbjct: 403 GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKP 462

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N  + N +I GFV     +        M      P V+TY+T++N  S A    +   + 
Sbjct: 463 NPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALV 522

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M   G KP+   YS+L  G  + ++ + A  L    +E GF P+V +   II G CS 
Sbjct: 523 KEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSS 582

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G ++ A++++ +M +    PNL T  TLM G+ + R   RA +I   +  +G  P   ++
Sbjct: 583 GKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISY 642



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 206/439 (46%), Gaps = 8/439 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   ++N L + GK  E+  I++ + +      L TY+TL+  L      +    +  
Sbjct: 255 IPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYK 314

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ ENG+ PD + +N ++N +  +G +EE ++  WK+ E     T  +YN LI+G     
Sbjct: 315 EMAENGVSPDVVVYNTMLNGYLRAGRIEECLE-LWKVMEKEGCRTVVSYNILIRGLFENA 373

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E++ + +L+  E +   +  TY VLV   C    + +A +++ +        D   Y
Sbjct: 374 KVDEAISIWELLP-EKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAY 432

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +++     + G  D+   V+ +M  +G +PN   C  +I+G+ +  K+++ALRF   M  
Sbjct: 433 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVS 492

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            G  P +V +N LI G  +    +   E  AL+KE       P++ITYS +MN       
Sbjct: 493 KGCFPTVVTYNTLINGLSK---AERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKK 549

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D    ++    + G KPD   ++I+  G     + E A +L   M +    PN+V   T
Sbjct: 550 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNT 609

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++ G+      +RA +++D + ++G  P++ ++   + G     +   A   L      G
Sbjct: 610 LMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 669

Query: 489 VHPQKSTFLLLAEARRATG 507
           V P   T+ +L  A    G
Sbjct: 670 VLPTAITWNILVRAVLDNG 688



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 165/376 (43%), Gaps = 36/376 (9%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M KE CRTV S   L+  L E  K  EA +I+  L E       +TY  L+  L      
Sbjct: 351 MEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC----- 405

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                      +NG      + N  ++   E+ N    +DTF              Y+++
Sbjct: 406 -----------KNG------YLNKALSILEEAENGRGDLDTF-------------AYSSM 435

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G    G+ +E   +LD M++ G  KPN    N ++  +     + +A      M + G
Sbjct: 436 INGLCREGRLDEVAGVLDQMTKHG-CKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKG 494

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             P VVTYNT+    ++     +A  ++ EM H G +PN  T  ++++G C+  K+  AL
Sbjct: 495 CFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMAL 554

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                  E G  P++ + N++I G       +   ++ + MK+ +  P+++T++T+M  +
Sbjct: 555 NLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGF 614

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
                 ++  +I+D + + G +PD  +Y+I  KG         A   L   ++ G  P  
Sbjct: 615 YKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTA 674

Query: 424 VIFTTIISGWCSDGSM 439
           + +  ++     +G++
Sbjct: 675 ITWNILVRAVLDNGAL 690



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 158/341 (46%), Gaps = 2/341 (0%)

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           T+IK Y     P++++ +   M      +P +R+YN L+ A        EA +       
Sbjct: 83  TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFET 142

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G+ P++ TYN +     +  + D+A+E++  M   G  P+  + G +I+   K G + +
Sbjct: 143 MGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSD 202

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA-LMKEFRVNPDVITYSTIM 360
           AL+    M E GV P++  +N+LI GF +  D     E+   L+K   V P++ +Y+ ++
Sbjct: 203 ALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMI 262

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           N     G  D+  EI+  M K     D + YS L  G       + A  +   M E+G  
Sbjct: 263 NGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVS 322

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+VV++ T+++G+   G ++  +E++  M + G    + ++  L+ G  E  +   A  I
Sbjct: 323 PDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISI 381

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            +++          T+ +L       G   +A  IL + +N
Sbjct: 382 WELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 107/207 (51%), Gaps = 2/207 (0%)

Query: 324 LIKGFVEIMDRDGVDEVLALMKE-FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +IK + +    D   ++   M E F   P + +Y++++NA   +   D+ +  F      
Sbjct: 84  VIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETM 143

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ P+   Y+IL K   R+++ +KA+ELL  M E GF P+V  + T+I+    +G M  A
Sbjct: 144 GLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDA 203

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ-IMKAFGVHPQKSTFLLLAE 501
           +++FD+M E GV+P++  +  L+ G+ +      A EI + ++K   V+P   ++ ++  
Sbjct: 204 LKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN 263

Query: 502 ARRATGLTKEAKRILSKIKNKERTNEM 528
                G   E+  I  ++K  ER  ++
Sbjct: 264 GLCKCGKFDESFEIWHRMKKNERGQDL 290


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 220/416 (52%), Gaps = 1/416 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L  +G+  +A    + ++  G +   V+Y TL+  L       +   ++ +V
Sbjct: 130 TFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRV 189

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +   + P+ + ++ +I++  +   + +A D + +M    ++P   TY++LI G+ + GK 
Sbjct: 190 DGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKL 249

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + +V L + M  + N+ PN+ T+++L+  +C E  + EA NV+  M    +K DVVTYN+
Sbjct: 250 KYAVDLFNRMISD-NINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNS 308

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    + ++A+ +   M   GV P+  +  I+I+G+CK   + EA++    M    
Sbjct: 309 LMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQ 368

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + PN+V +N L+ G  +        E++  M +     ++ITY++I++A      +DK  
Sbjct: 369 IFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAI 428

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +   + + GI+PD   Y++L  G  +    + A+++   ++  G+ PN+  +T++I+G+
Sbjct: 429 VLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGF 488

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           C+ G  D  + +  KM ++G  PN  T+E L+    E  +  +AE++L+ M A G+
Sbjct: 489 CNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 217/427 (50%), Gaps = 2/427 (0%)

Query: 94  IFNNLIEGGHK-PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAF 152
           +FN L+   +  P  + +  +L +L   K++ +  S+  Q+E NG+ PD I  N ++N F
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
           S+ G+++ +   F K+ + G  P   T+  LIKG  + G+  +++   D +  +G  + +
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQG-FQLD 162

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
             +Y  L+   C       A  ++ ++    ++P+VV Y+TI  +  ++   + A ++  
Sbjct: 163 QVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYC 222

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           EM    + P+  T   +ISG+C  GK+K A+     M    ++PN+  F++LI GF +  
Sbjct: 223 EMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEG 282

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
                  VLA+M +  V  DV+TY+++M+ +     ++K K +F+ M + G+ PD  +YS
Sbjct: 283 KVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYS 342

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           I+  G+ + +  ++A +L   M      PNVV + +++ G C  G    A+E+ D+M + 
Sbjct: 343 IMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDR 402

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G   N+ T+ +++    +     +A  +L  +K  G+ P   T+ +L       G   +A
Sbjct: 403 GQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDA 462

Query: 513 KRILSKI 519
           +++   +
Sbjct: 463 QKVFEDL 469



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 140/270 (51%), Gaps = 1/270 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++   + GK +EA+ +   +++   K  +VTY +L+    + K+ N   S+ +
Sbjct: 268 VYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFN 327

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G+ PD   ++ +IN F +   ++EAM  F +M    + P   TYN+L+ G   +G
Sbjct: 328 VMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSG 387

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +   +++L+D M   G    N+ TYN ++ A C   ++ +A  ++ K+   G++PD+ TY
Sbjct: 388 RTSCALELVDEMHDRGQ-PSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTY 446

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     + G  D A++V  ++   G  PN  T   +I+G+C +G   E L     MK+
Sbjct: 447 TVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKD 506

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
            G  PN + + +LI    E  + D  +++L
Sbjct: 507 NGCIPNAITYEILIHSLFEKDENDKAEKLL 536



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/325 (23%), Positives = 151/325 (46%)

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           L + +  + N  P    +  ++ +    K    A ++  +M  +G+KPD +T N +   +
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
           +Q G    +  V  ++   G  P+  T  I+I G C +G++ +AL F   +   G   + 
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           V +  LI G   + +     ++L  +    V P+V+ YSTI+++      ++   +++ +
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M    I PD   YS L  G+    + + A +L   MI    +PNV  F+ +I G+C +G 
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +  A  V   M +  V  ++ T+ +LM GY   +Q  +A+ +  +M   GV P   ++ +
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSI 343

Query: 499 LAEARRATGLTKEAKRILSKIKNKE 523
           +        +  EA ++  ++  K+
Sbjct: 344 MINGFCKIKMVDEAMKLFEEMHCKQ 368



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 51/251 (20%), Positives = 116/251 (46%), Gaps = 1/251 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M K     V +   LM+      +  +A+++FN + + G  P + +Y+ ++      K  
Sbjct: 295 MKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMV 354

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +  ++    + P+ + +N++++   +SG    A++   +M + G      TYN++
Sbjct: 355 DEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSI 414

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           +         ++++ LL  +  +G ++P++ TY VL+   C    + +A  V   +   G
Sbjct: 415 LDAICKNNHVDKAIVLLTKIKEKG-IQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKG 473

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             P++ TY ++   +   G  D+   ++ +M+ NG  PN  T  I+I    ++ +  +A 
Sbjct: 474 YSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAE 533

Query: 304 RFARTMKEYGV 314
           +  R M   G+
Sbjct: 534 KLLREMIARGL 544



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 91/188 (48%), Gaps = 6/188 (3%)

Query: 57  QTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAA 116
           + HC     K+    V +   L++ L + G+   A  + + + + G   +++TY ++L A
Sbjct: 363 EMHC-----KQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDA 417

Query: 117 LTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPT 176
           +      +    ++++++E G+ PD   +  +IN   + G +++A   F  +   G +P 
Sbjct: 418 ICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPN 477

Query: 177 TSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
             TY +LI G+   G  +E + +L  M   G + PN  TY +L+ +   +    +A  ++
Sbjct: 478 IYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCI-PNAITYEILIHSLFEKDENDKAEKLL 536

Query: 237 HKMAASGM 244
            +M A G+
Sbjct: 537 REMIARGL 544


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 132/499 (26%), Positives = 231/499 (46%), Gaps = 30/499 (6%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM-SQVEENGMDPDSIFF 145
           +    ++I NN           T   LL  L   +R +  + I   ++     D + I +
Sbjct: 59  RSHRGESIHNNF----------TCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITY 108

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +I  F ++G+ME A     +MKE G +P   T++++++     G    +++      R
Sbjct: 109 NTLIGGFCKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYF----R 164

Query: 206 EG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           E     P+   +N+LV   C    ++EA  ++ +M+  G+ PDVVTYN++     ++   
Sbjct: 165 ESVECAPDSVLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRM 224

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           ++A +++  M    V+PN  T   +I GYCK G    A +    M + G HP++V FN L
Sbjct: 225 EEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSL 284

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I GF +    D   EVL LMK+    P+++TY+ +++    AG  ++  E+  +M   GI
Sbjct: 285 ISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGI 344

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            PD   Y+ L   + R  + E+A ++   M+E G  P+ + + T+          D A  
Sbjct: 345 LPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFA 404

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + D M + G  PNL TF +LM G   +R+   A  +L +M+  G  P  ST+ +L     
Sbjct: 405 LLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLC 464

Query: 505 ATGLTKEAKRILSKIKNK------------ERTNEMEAEEDIPVESLERLYHKE--ATTA 550
             G   +AK +L  + ++              T   E ++D+ +   +++   E  A   
Sbjct: 465 KAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDP 524

Query: 551 SYPNLLQIPNVVSSDQKGS 569
           SY  LL+   V+   +  S
Sbjct: 525 SYQKLLEFVKVLREGKSNS 543



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/419 (27%), Positives = 215/419 (51%), Gaps = 4/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           L+ +L++  +  +A  IF + + G H   + +TY TL+              ++++++E 
Sbjct: 75  LLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGFCKAGDMERAFQLLAEMKER 134

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  PD +  ++++ A   +GN+  AM  F +  E    P +  +N L+ G   A +  E+
Sbjct: 135 GHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQLSEA 192

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            ++++ MS  G V P++ TYN L+   C    + EA  ++  M    ++P++VTYNT+  
Sbjct: 193 RQMIEEMSERGIV-PDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIY 251

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y + G    A ++I  M  +G  P+  T   +ISG+C++ KI +A      MK+    P
Sbjct: 252 GYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAP 311

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           NLV +N+LI G  +    +   E+L+ M    + PD+ITY++++  +     +++  +I 
Sbjct: 312 NLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQ 371

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           + M + G+ PD  +Y  LA   ++ +  ++A  LL  M ++G  PN+  F +++ G C  
Sbjct: 372 NLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCS 431

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
             +D A  +   M   G  P   T+E L+ G  +A +   A+E+L +M + G+ P  S+
Sbjct: 432 RRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSS 490



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 185/381 (48%), Gaps = 9/381 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + ++ +L   G    A   F   +E    P  V +  L+  L    + +    ++ 
Sbjct: 140 VVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDSVLFNILVHGLCKANQLSEARQMIE 197

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E G+ PD + +N++I+   +S  MEEA      M +  + P   TYNTLI GY   G
Sbjct: 198 EMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTG 257

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               + +L++ M + G   P++ T+N L+  +C +  I +A  V+H M      P++VTY
Sbjct: 258 CTGLAHQLIERMIQSGT-HPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTY 316

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N + +     G A++A E++ EM+  G+ P+  T   +I  +C+  +I++A +    M E
Sbjct: 317 NVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVE 376

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGF 368
            GV P+ + +  L    V ++  +  DE  AL   M +    P++ T++++M     +  
Sbjct: 377 RGVIPDGISYCTLA---VALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRR 433

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D+ + +   M + G  P A  Y +L  G  +    + A+E+L+ M+  G  P V    T
Sbjct: 434 LDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGT 493

Query: 429 IISGWCSDGSMDRAIEVFDKM 449
           I+     +G  D A+  FD++
Sbjct: 494 IVHTLAREGKQDLALHYFDQV 514



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 150/311 (48%), Gaps = 1/311 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L +  + +EA+ +   +++   +P+LVTY TL+            H ++ 
Sbjct: 208 VVTYNSLIDGLCKSYRMEEARQLLETMVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIE 267

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ ++G  PD + FN++I+ F +   +++A +    MK+    P   TYN LI G   AG
Sbjct: 268 RMIQSGTHPDVVTFNSLISGFCQKSKIDKACEVLHLMKKGLCAPNLVTYNVLISGLCDAG 327

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ +LL  M   G + P++ TYN L+  +C    I +A+ + + M   G+ PD ++Y
Sbjct: 328 RANEACELLSEMDGRG-ILPDIITYNSLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISY 386

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+A A  ++   D+A  ++  M   G  PN  T   ++ G C   ++ EA      M+ 
Sbjct: 387 CTLAVALLKSERFDEAFALLDNMFDAGAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRR 446

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P    + +L+ G  +    D   EVL +M    + P V +  TI++  +  G  D 
Sbjct: 447 VGCDPAASTYEVLVTGLCKAGRVDDAKEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDL 506

Query: 372 CKEIFDDMGKA 382
               FD +  A
Sbjct: 507 ALHYFDQVVAA 517


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 225/444 (50%), Gaps = 3/444 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           K++  L    +   A   F+ ++  G  P+LVT++TL+     + R +   S+ + + E 
Sbjct: 245 KILKGLCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEK 304

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G+ PD + ++ +IN    +G +EE    F      G+      +++++  Y   G   ++
Sbjct: 305 GIVPDLVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKA 364

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +++   M +EG + PN+ TY++L+   C    + EA  V  ++   G++P V+TY+++  
Sbjct: 365 IEVYTRMLKEG-ISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLID 423

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            + ++        +   M   G  P+   C ++I+G  ++G + EALRF     + G+  
Sbjct: 424 GFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTL 483

Query: 317 NLVIFNLLIKGFVEI-MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           N  +FN LI G   +   RDG+ ++  LM  ++V PDV+TY+ ++   +  G +D+   +
Sbjct: 484 NNYLFNALIDGCFRLKRTRDGL-KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALAL 542

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F  + K G  PD   Y  L  G+ ++++P    ++   M  +G  P++ I+  +I+ +  
Sbjct: 543 FFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFR 602

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G ++  +E+  ++ ++G+ P++ T+ T++ GY   +   +A ++ +++K     P   T
Sbjct: 603 EGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAIT 662

Query: 496 FLLLAEARRATGLTKEAKRILSKI 519
           F +L +A    G   +A  I S +
Sbjct: 663 FTILIDAYCKDGRMDDAMLIFSSM 686



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 202/421 (47%), Gaps = 1/421 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+N L   G+  EA  +F  +++ G +PS++TY++L+      +       +  
Sbjct: 380 VVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYG 439

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  PD +  + +IN  S  G M+EA+  F++  + GLT     +N LI G     
Sbjct: 440 IMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLK 499

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  + +K+  LM     V P++ TY VLV+    +  + EA  +  ++   G  PD + Y
Sbjct: 500 RTRDGLKMYILMGMY-KVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIY 558

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   + +  +     ++   M+ NG+ P+     ++I+ + +EG ++  L   R + +
Sbjct: 559 CTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIK 618

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           YG+ P++V +N +I G+  +       ++  ++K  R  P+ IT++ +++A+   G MD 
Sbjct: 619 YGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDD 678

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              IF  M + G +P+   YS L  GY + +  E A EL   M+     PN+V ++ +I 
Sbjct: 679 AMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILID 738

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G M+ A   F       + P++  +  L+ GY +  +   A  +   M   G+ P
Sbjct: 739 GLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMP 798

Query: 492 Q 492
            
Sbjct: 799 D 799



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 222/477 (46%), Gaps = 42/477 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L+N   +  +  EA +++N +IE G  P LV Y+ L+  L    +    +S+ S  
Sbjct: 277 TFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMA 336

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+  D + F+++++A+   G++ +A++ + +M + G++P   TY+ LI G    G+ 
Sbjct: 337 LARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRV 396

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+  +   + ++G ++P++ TY+ L+  +C  +N+ + + +   M   G  PDVV  + 
Sbjct: 397 LEACGVFGQILKQG-LEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSM 455

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +    ++ G  D+A     +    G+  N      +I G  +  + ++ L+    M  Y 
Sbjct: 456 LINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYK 515

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMD 370
           V P++V + +L+KG  E   +  +DE LAL  +      +PD I Y T+++ +       
Sbjct: 516 VIPDVVTYTVLVKGLAE---QGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPA 572

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              +IF  M   GI PD   Y++L   + RE   E   ELL  +I+ G  P++V + T+I
Sbjct: 573 TGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMI 632

Query: 431 SGWCS-----------------------------------DGSMDRAIEVFDKMCEHGVS 455
            G+CS                                   DG MD A+ +F  M E G  
Sbjct: 633 CGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPE 692

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           PN+ T+  L+ GY +      A E+ + M    V P   ++ +L +     GL +EA
Sbjct: 693 PNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEA 749



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/416 (22%), Positives = 183/416 (43%), Gaps = 32/416 (7%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPT-------------------- 176
           G +P +++ + +++ +  +G ++ A+DTF  M + G++ +                    
Sbjct: 136 GSNPSTVY-SFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 177 TSTYNTLIKGYGIA----------GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
              Y  + KG G+           G+ E+ +     +   G V P +   N +++  C  
Sbjct: 195 LENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLV-PKIVDCNKILKGLCMG 253

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
             I  A +    M  SG  P++VT++T+   Y +    D+A  +   M   G+ P+    
Sbjct: 254 NQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIY 313

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
            I+I+G  + GK++E           GV  ++VIF+ ++  +V + D     EV   M +
Sbjct: 314 SILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLK 373

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             ++P+V+TYS ++N     G + +   +F  + K G++P    YS L  G+ + +    
Sbjct: 374 EGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRD 433

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
              L   M+  G  P+VV+ + +I+G    G MD A+  F +  + G++ N   F  L+ 
Sbjct: 434 GFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALID 493

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G    ++     ++  +M  + V P   T+ +L +     G   EA  +  ++  K
Sbjct: 494 GCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKK 549



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 93/221 (42%), Gaps = 34/221 (15%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N     G  +    +   +I+ G +P +VTY T++      K F+    +   ++   
Sbjct: 596 LINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGR 655

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P++I F  +I+A+ + G M++AM  F  M E G  P   TY+ LI GY      E + 
Sbjct: 656 TQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAF 715

Query: 198 KL-------------------LDLMSREG---------------NVKPNLRTYNVLVRAW 223
           +L                   +D + ++G               ++ P++  Y +L+R +
Sbjct: 716 ELYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGY 775

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           C    + EA  +   M  +G+ PD +    +A    Q+ +A
Sbjct: 776 CKVGRLAEAMMLYDHMLVNGIMPDDLLQKALAEYGFQDSQA 816



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 35/140 (25%), Positives = 71/140 (50%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+++  + G+  +A  IF++++E G +P+++TY+ L+      +   S   +  ++
Sbjct: 662 TFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKM 721

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             + + P+ + ++ +I+   + G MEEA   F       L P    Y  LI+GY   G+ 
Sbjct: 722 LGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRL 781

Query: 194 EESVKLLDLMSREGNVKPNL 213
            E++ L D M   G +  +L
Sbjct: 782 AEAMMLYDHMLVNGIMPDDL 801


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 219/416 (52%), Gaps = 1/416 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+  L  +G+ ++A    + L+  G + + V+Y TL+  +           ++ ++
Sbjct: 379 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKI 438

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +     P+   ++ +I+A  +   + EA   F +M   G++    TY+TLI G+ I GK 
Sbjct: 439 DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKL 498

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E++ LL+ M  +  + P++RTY +LV A   E  + EA +V+  M  + +KPDV TYNT
Sbjct: 499 KEAIGLLNEMVLK-TINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNT 557

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    E  +A+ V   M   GV P+  T  I+I+G+CK   + EAL   + M +  
Sbjct: 558 LMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKN 617

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P+ V ++ L+ G  +      V +++  M++     DVITY+++++     G +DK  
Sbjct: 618 MVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAI 677

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F+ M   GI+P+   ++IL  G  +    + A+E+   ++  G+H +V I+  +I G 
Sbjct: 678 ALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGH 737

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           C  G ++ A+ +  KM E+G  PN  TF+ ++    +  +  +AE++L+ M A G+
Sbjct: 738 CKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 225/483 (46%), Gaps = 35/483 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   ++N   +  +  +A  +F  +I     P ++ +  +L +    K +++  S+  
Sbjct: 273 VHSYNIMINGFCKIKRVDKALNLFKEMILSRF-PPIIQFNKILDSFAKMKHYSTAVSLSH 331

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++E  G+ PD    N +IN F   G +        K+ + G  P+T T NTLIKG  + G
Sbjct: 332 RLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKG 391

Query: 192 KPEESVKLLDLMSREGN----------------------------------VKPNLRTYN 217
           + ++++   D +  +G                                    KPN+  Y+
Sbjct: 392 QVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYS 451

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++ A C  + ++EA+ +  +M   G+  DVVTY+T+   +   G+  +A  ++ EM   
Sbjct: 452 TIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLK 511

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
            + P+ RT  I++    KEGK+KEA      M +  V P++  +N L+ G++ + +    
Sbjct: 512 TINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKA 571

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
             V   M    V PDV TY+ ++N +  +  +D+   +F +M +  + PD   YS L  G
Sbjct: 572 QHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDG 631

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             +        +L+  M + G   +V+ + ++I G C +G +D+AI +F+KM + G+ PN
Sbjct: 632 LCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPN 691

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
             TF  L+ G  +  +   A+E+ Q +   G H     + ++       GL +EA  +LS
Sbjct: 692 TFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLS 751

Query: 518 KIK 520
           K++
Sbjct: 752 KME 754



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 224/479 (46%), Gaps = 37/479 (7%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+  L  +G+ +EA    + L+  G + + V+Y TL+  +       +    + ++
Sbjct: 65  TLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKI 124

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +     P+   +N +I+A  +   + EA   F +M   G++    TY+TLI G+ I GK 
Sbjct: 125 DGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKL 184

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E++ LL++M  +  + PN+ TYN+LV A C E  + EA +V+  M  + +K +V+TY+T
Sbjct: 185 KEALGLLNVMVLK-TINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYST 243

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR--------- 304
           +   Y    E  +A+ V   M   GV P+  +  I+I+G+CK  ++ +AL          
Sbjct: 244 LMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSR 303

Query: 305 -------------FARTMKEY-------------GVHPNLVIFNLLIKGFVEIMDRDGVD 338
                        FA+ MK Y             G+ P+L   N+LI  F  +       
Sbjct: 304 FPPIIQFNKILDSFAK-MKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGF 362

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            VLA + +    P  +T +T++      G + K     D +   G + +  +Y+ L  G 
Sbjct: 363 SVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGV 422

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +  +   A +LL  +      PNV +++TII   C    +  A  +F +M   G+S ++
Sbjct: 423 CKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADV 482

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
            T+ TL++G+    +   A  +L  M    ++P   T+ +L +A    G  KEAK +L+
Sbjct: 483 VTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLA 541



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/479 (22%), Positives = 215/479 (44%), Gaps = 35/479 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++L +     EA  +F+ +   G   ++VTY+TL+    I  +      +++ +    
Sbjct: 139 IIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKT 198

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++P+   +N +++A  + G ++EA      M ++ +     TY+TL+ GY +  + +++ 
Sbjct: 199 INPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQ 258

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM--------------------- 236
            + + MS  G V P++ +YN+++  +C  K + +A N+                      
Sbjct: 259 HVFNAMSLMG-VTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPPIIQFNKILDSF 317

Query: 237 -------------HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
                        H++   G++PD+ T N +   +   G+      V+ ++   G  P+ 
Sbjct: 318 AKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPST 377

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T   +I G C +G++K+AL F   +   G   N V +  LI G  +I D  G  ++L  
Sbjct: 378 VTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRK 437

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           +      P+V  YSTI++A      + +   +F +M   GI  D   YS L  G+    +
Sbjct: 438 IDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGK 497

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            ++A  LL  M+    +P+V  +T ++     +G +  A  V   M +  V P++ T+ T
Sbjct: 498 LKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNT 557

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           LM GY    +  +A+ +   M   GV P   T+ +L      + +  EA  +  ++  K
Sbjct: 558 LMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQK 616



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/430 (23%), Positives = 188/430 (43%), Gaps = 37/430 (8%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           S+++++ + G  PD++  N +I      G ++EA+    K+   G      +Y TLI G 
Sbjct: 49  SVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGV 108

Query: 188 GIAGKPEESVKLLDLMSREGNV-KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
              G    ++K L  +  +G + KPN+  YN ++ A C  + ++EA+ +  +M   G+  
Sbjct: 109 CRIGDTRAAIKFLRKI--DGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           +VVTY+T+   +   G+  +A  ++  M    + PN  T  I++   CKEGK+KEA    
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             M +  V  N++ ++ L+ G+  + +      V   M    V PDV +Y+ ++N +   
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKI 286

Query: 367 GFMDKCKEIFDDMGKA----------------------------------GIKPDAHAYS 392
             +DK   +F +M  +                                  GI+PD    +
Sbjct: 287 KRVDKALNLFKEMILSRFPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLN 346

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           IL   +    +      +L  +++ G+ P+ V   T+I G C  G + +A+   DK+   
Sbjct: 347 ILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQ 406

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G   N  ++ TL+ G  +      A ++L+ +      P    +  + +A     L  EA
Sbjct: 407 GFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEA 466

Query: 513 KRILSKIKNK 522
             + S++  K
Sbjct: 467 YGLFSEMTVK 476



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 168/365 (46%), Gaps = 4/365 (1%)

Query: 157 NMEEA--MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
           N+++A  +    K+ + G  P T T NTLIKG  + G+ +E++   D +  +G  + N  
Sbjct: 41  NVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQG-FQLNQV 99

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           +Y  L+   C   +   A   + K+     KP+V  YNTI  A  +     +A  +  EM
Sbjct: 100 SYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEM 159

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G+  N  T   +I G+C  GK+KEAL     M    ++PN+  +N+L+    +    
Sbjct: 160 TVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKV 219

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
                VLA+M +  V  +VITYST+M+ +     + K + +F+ M   G+ PD H+Y+I+
Sbjct: 220 KEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIM 279

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G+ + +  +KA  L   MI S F P ++ F  I+  +        A+ +  ++   G+
Sbjct: 280 INGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGI 338

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            P+L T   L+  +    Q      +L  +   G  P   T   L +     G  K+A  
Sbjct: 339 QPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALH 398

Query: 515 ILSKI 519
              K+
Sbjct: 399 FHDKL 403



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 115/209 (55%), Gaps = 3/209 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+N   +     EA  +F  + +    P  VTY++L+  L    R + +  ++ 
Sbjct: 587 VHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLID 646

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G   D I +N++I+   ++G++++A+  F KMK+ G+ P T T+  L+ G    G
Sbjct: 647 EMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGG 706

Query: 192 KPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           + +++ ++  DL+++  ++  ++  YNV++   C +  + EA  ++ KM  +G  P+ VT
Sbjct: 707 RLKDAQEVFQDLLTKGYHL--DVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVT 764

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           ++ I  A  +  E D+AE+++ +M   G+
Sbjct: 765 FDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 106/237 (44%)

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           QN +   +  V+ ++   G  P+  T   +I G C +G++KEAL F   +   G   N V
Sbjct: 40  QNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQV 99

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            +  LI G   I D     + L  +      P+V  Y+TI++A      + +   +F +M
Sbjct: 100 SYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEM 159

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              GI  +   YS L  G+    + ++A  LL  M+    +PNV  +  ++   C +G +
Sbjct: 160 TVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKV 219

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             A  V   M +  V  N+ T+ TLM GY    +  +A+ +   M   GV P   ++
Sbjct: 220 KEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSY 276


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 218/445 (48%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L E  K +  ++ +  +   G +P +VT+ T++ AL   ++  +   ++ ++    
Sbjct: 167 LLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCD 226

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   F  ++  F E G++E A+    +M E G +PT+ T N LI GY   G+  +++
Sbjct: 227 VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDAL 286

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             +     +G  +P+  T++  V   C   ++  A  V+  M   G +PDV TY+T+   
Sbjct: 287 GYIQQEIADG-FEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINC 345

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
              NGE ++A+ ++ +M  +G  P+  T   +I   C E +++EAL  AR +   G+ PN
Sbjct: 346 LCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPN 405

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  FN+LI    ++ D      +   MK     PD +TY+ +++   ++G + K  ++  
Sbjct: 406 VYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLK 465

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M  +G       Y+ +  G  + +  E+AEE+   M  +G   N + F T+I G C+  
Sbjct: 466 EMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAE 525

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D A E+ D+M   G+ PN  T+ +++  Y +     +A +ILQ M A G      T+ 
Sbjct: 526 RIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYA 585

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L         T+ A ++L  ++ K
Sbjct: 586 TLINGLCKARRTQAALKLLRGMRMK 610



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 207/449 (46%), Gaps = 2/449 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T LM   +E G  + A  +   + E G  P+ VT   L+       R       + Q 
Sbjct: 233 TFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQE 292

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G +PD + F+  +N   ++G+++ A+     M + G  P   TY+T+I      G+ 
Sbjct: 293 IADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGEL 352

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           EE+  +++ M   G + P+  T+N L+ A C E  + EA ++  ++   G+ P+V T+N 
Sbjct: 353 EEAKGIVNQMVDSGCL-PDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNI 411

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A  + G+   A  +  EM+ +G  P+  T  I+I   C  GK+ +AL   + M+  G
Sbjct: 412 LINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSG 471

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              + V +N +I G  +    +  +EV   M    +  + IT++T+++    A  +D   
Sbjct: 472 CPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAA 531

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+ D M   G++P+   Y+ +   Y ++    KA ++L TM  +GF  +VV + T+I+G 
Sbjct: 532 ELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGL 591

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C       A+++   M   G+ P  K +  ++           A  + + M   G  P  
Sbjct: 592 CKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTEVGGPPDA 651

Query: 494 STFLLLAEAR-RATGLTKEAKRILSKIKN 521
            T+ ++     R  G  KEA   L ++ +
Sbjct: 652 FTYKIVFRGLCRGGGPIKEAFDFLVEMAD 680



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 111/388 (28%), Positives = 185/388 (47%), Gaps = 6/388 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +E C   V + + ++N L   G+ +EA+ I N +++ G  P   T+ TL+ AL  + +
Sbjct: 327 MLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQ 386

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +  ++   G+ P+   FN +INA  + G+   A+  F +MK SG TP   TYN 
Sbjct: 387 LEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNI 446

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI     +GK  +++ LL  M   G  +  + TYN ++   C  + I EA  V  +M  +
Sbjct: 447 LIDNLCSSGKLAKALDLLKEMEVSGCPQSTV-TYNTIIDGLCKRRRIEEAEEVFDQMDVT 505

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+  + +T+NT+          D A E++ +M   G+QPN  T   I++ YCK+G I +A
Sbjct: 506 GIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKA 565

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
               +TM   G   ++V +  LI G  +        ++L  M+   + P    Y+ ++ +
Sbjct: 566 ADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQS 625

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK-AEELLMTMIESGFHP 421
                       +F +M + G  PDA  Y I+ +G  R   P K A + L+ M ++GF P
Sbjct: 626 LFRGNNGRDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIP 685

Query: 422 NVVIFTTIISGWCSDGSMD---RAIEVF 446
               F  +  G  + G  D   RAIE+ 
Sbjct: 686 EFSSFRMLAEGLLNLGMDDYLIRAIELI 713



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 189/412 (45%), Gaps = 41/412 (9%)

Query: 148 VINAFSESGNMEEAMDTFWKM--KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           ++ A  E  + E A+        ++ GLTP+   Y  +I+  G AG  +    L+  M R
Sbjct: 59  LVTALREQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRR 118

Query: 206 EGN-----------------------------------VKPNLRTYNVLVRAWCNEKNIT 230
           EG+                                   V+ N   YN L+        I 
Sbjct: 119 EGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIK 178

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
              +   +M++ G++PDVVT+NT+  A  +  +A  A  ++ EM    V P+  T   ++
Sbjct: 179 LLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLM 238

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR-- 348
            G+ +EG I+ ALR    M E G  P  V  N+LI G+ + + R G D +  + +E    
Sbjct: 239 EGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCK-LGRVG-DALGYIQQEIADG 296

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             PD +T+ST +N     G +D   ++   M + G +PD + YS +        E E+A+
Sbjct: 297 FEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAK 356

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            ++  M++SG  P+   F T+I   C++  ++ A+++  ++   G+SPN+ TF  L+   
Sbjct: 357 GIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINAL 416

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            +   P  A  + + MK+ G  P + T+ +L +   ++G   +A  +L +++
Sbjct: 417 CKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEME 468


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 225/441 (51%), Gaps = 3/441 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L   GK  +A  + + ++E G +P +VTY +++  +      +    ++ ++EE  
Sbjct: 164 LINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERN 223

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   ++ +I++    G ++ A+  F +M+  G+  +  TYN+L++G   AGK  +  
Sbjct: 224 VKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGA 283

Query: 198 KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            LL D++SRE  + PN+ T+NVL+  +  E  + EA  +  +M   G+ P+++TYNT+  
Sbjct: 284 LLLKDMVSRE--IVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMD 341

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y       +A  ++  M  N   P+  T   +I GYC   ++ + ++  R + + G+  
Sbjct: 342 GYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVA 401

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N V +++L++GF +       +E+   M    V PDV+TY  +++     G ++K  EIF
Sbjct: 402 NAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIF 461

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           +D+ K+ +      Y+ + +G  +  + E A  L  ++   G  PNV+ +T +ISG C  
Sbjct: 462 EDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKK 521

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           GS+  A  +  KM E G +PN  T+ TL+  +        + ++++ MK+ G     S+ 
Sbjct: 522 GSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSI 581

Query: 497 LLLAEARRATGLTKEAKRILS 517
            ++ +   +  L K    +LS
Sbjct: 582 KMVIDMLLSGELDKSFLDMLS 602



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/505 (23%), Positives = 235/505 (46%), Gaps = 39/505 (7%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A A+F  +I     P LV ++   +A+   K+FN +     Q+E NG+  +    N
Sbjct: 68  KKDDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLN 127

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN F        A     K+ + G  P T+T+NTLI G  + GK  ++V L+D M   
Sbjct: 128 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVEN 187

Query: 207 G----------------------------------NVKPNLRTYNVLVRAWCNEKNITEA 232
           G                                  NVK ++ TY+ ++ + C +  I  A
Sbjct: 188 GCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAA 247

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
            ++  +M   G+K  VVTYN++     + G+ +    ++ +M    + PN  T  +++  
Sbjct: 248 ISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDV 307

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
           + KEGK++EA    + M   G+ PN++ +N L+ G+         + +L LM   + +PD
Sbjct: 308 FVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPD 367

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
           ++T+++++  +     +D   ++F ++ K G+  +A  YSIL +G+ +  + + AEEL  
Sbjct: 368 IVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQ 427

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M+  G  P+V+ +  ++ G C +G +++A+E+F+ + +  +   +  + T++ G  +  
Sbjct: 428 EMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGG 487

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
           +   A  +   +   GV P   T+ ++       G   EA  +L K++      +  A  
Sbjct: 488 KVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKME-----EDGNAPN 542

Query: 533 DIPVESLERLYHKEATTASYPNLLQ 557
           D    +L R + ++    +   L++
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIE 567



 Score = 52.4 bits (124), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 31/129 (24%), Positives = 70/129 (54%), Gaps = 3/129 (2%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T ++  + + GK ++A  +F +L   G KP+++TYT +++ L  +   +  + ++ ++EE
Sbjct: 477 TTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +G  P+   +N +I A    G++  +     +MK  G +   S+   +I    ++G+ ++
Sbjct: 537 DGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML-LSGELDK 595

Query: 196 SVKLLDLMS 204
           S   LD++S
Sbjct: 596 S--FLDMLS 602


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 218/450 (48%), Gaps = 6/450 (1%)

Query: 75  MTKLMNSLIERGKPQEAQAIFN-NLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +++L+  L +  +  EA  I    + E G  P +V Y T++     + +    +++  ++
Sbjct: 128 ISQLLKGLCDAKRVDEATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEM 187

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            + G+ P+ + +  VI+   ++  ++ A   F +M + G+ P   TYN LI GY   GK 
Sbjct: 188 MDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKW 247

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E V++L+ MS  G ++P+  TY +L+   C      EA      M   G+KPDV  Y  
Sbjct: 248 KEVVQMLEEMSTHG-LEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAI 306

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   YA  G   +    +  M  NGV PN R   I+   Y K+  I+EA+     M++ G
Sbjct: 307 LLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQG 366

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLAL--MKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           + P++V F  LI    ++   D  D VL    M    V P++  +S+++    T G  +K
Sbjct: 367 LSPDVVSFGALIDALCKLGRVD--DAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEK 424

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +E+F ++   GI  DA  ++ L      E    +A+ L+  MI  G  PNV+ + T+++
Sbjct: 425 AEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVA 484

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G +D A ++ D M  +G+ PN  T+  L+ GY +AR+   A  + + M   GV P
Sbjct: 485 GHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTP 544

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             +T+  +      TG   EA  +   + N
Sbjct: 545 VVATYNTILHGLFQTGRFSEANELYLNMIN 574



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 212/436 (48%), Gaps = 12/436 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS-QVEEN 136
           L+      G+ +   A F  +++ G + +++  + LL  L   KR +    I+  ++ E 
Sbjct: 96  LIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLRMSEF 155

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  PD + +N VIN F   G +E+A + F +M + G+ P   TY T+I G   A   + +
Sbjct: 156 GCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRA 215

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
             +   M   G VKP+  TYN L+  + +     E   ++ +M+  G++PD +TY  +  
Sbjct: 216 KGVFQQMIDRG-VKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLD 274

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              +NG   +A      M   G++P+     I++ GY  +G + E   F   M   GV P
Sbjct: 275 YLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSP 334

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCK 373
           N  IFN++   F     +  ++E + +  + R   ++PDV+++  +++A    G +D   
Sbjct: 335 NRRIFNIM---FCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAV 391

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
             F+ M   G+ P+   +S L  G     + EKAEEL   +++ G   + V F T++   
Sbjct: 392 LQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNL 451

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C++G +  A  + D M   GV PN+ ++ TL+ G+    +   A ++L +M + G+ P +
Sbjct: 452 CNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNE 511

Query: 494 STFLLL----AEARRA 505
            T+ +L     +ARR 
Sbjct: 512 FTYTILLRGYCKARRV 527



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 204/465 (43%), Gaps = 36/465 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++ L +      A+ +F  +I+ G KP   TY  L+       ++  +  ++ 
Sbjct: 196 VVTYTTVIDGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLE 255

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G++PD I +  +++   ++G   EA   F  M   G+ P  + Y  L+ GY   G
Sbjct: 256 EMSTHGLEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKG 315

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E    LDLM   G V PN R +N++  A+  +  I EA ++ +KM   G+ PDVV++
Sbjct: 316 ALSEMHSFLDLMVGNG-VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSF 374

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG------------------- 292
             +  A  + G  D A     +M + GV PN      ++ G                   
Sbjct: 375 GALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLD 434

Query: 293 ----------------YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
                            C EG++ EA R    M   GV PN++ +N L+ G       D 
Sbjct: 435 QGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDE 494

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             ++L +M    + P+  TY+ ++  +  A  +D    +F +M   G+ P    Y+ +  
Sbjct: 495 AAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILH 554

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  +     +A EL + MI S    ++  +  I++G C +  +D A ++F ++C      
Sbjct: 555 GLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQL 614

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           +  TF  ++    +  +   A ++   + A+G+ P   T+ L+AE
Sbjct: 615 DSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAE 659



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 199/426 (46%), Gaps = 3/426 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P+  TY+ L+       R     +    + + G   + I  + ++    ++  ++EA D 
Sbjct: 88  PNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDI 147

Query: 165 FW-KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              +M E G  P    YNT+I G+   G+ E++  L   M  +G + PN+ TY  ++   
Sbjct: 148 LLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQG-IPPNVVTYTTVIDGL 206

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C  + +  A  V  +M   G+KPD  TYN +   Y   G+  +  +++ EM  +G++P+ 
Sbjct: 207 CKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDC 266

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T  +++   CK G+ +EA  F  +M   G+ P++ I+ +L+ G+        +   L L
Sbjct: 267 ITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDL 326

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M    V+P+   ++ +  A++    +++   IF+ M + G+ PD  ++  L     +   
Sbjct: 327 MVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGR 386

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            + A      MI  G  PN+ +F++++ G C+ G  ++A E+F ++ + G+  +   F T
Sbjct: 387 VDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNT 446

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS-KIKNK 522
           LM       +   A+ ++ +M   GV P   ++  L      TG   EA ++L   + N 
Sbjct: 447 LMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNG 506

Query: 523 ERTNEM 528
            + NE 
Sbjct: 507 LKPNEF 512



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 205/430 (47%), Gaps = 9/430 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + G+ +EA+  F+++   G KP +  Y  LL     +   + +HS +  +  NG
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   FN +  A+++   +EEAM  F KM++ GL+P   ++  LI      G+ +++V
Sbjct: 332 VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAV 391

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
              + M  EG V PN+  ++ LV   C      +A  +  ++   G+  D V +NT+   
Sbjct: 392 LQFNQMINEG-VTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCN 450

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G   +A+ +I  M   GV+PN  +   +++G+C  G+I EA +    M   G+ PN
Sbjct: 451 LCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPN 510

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
              + +L++G+ +      VD+  +L +E     V P V TY+TI++     G   +  E
Sbjct: 511 EFTYTILLRGYCKARR---VDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANE 567

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           ++ +M  +  K D + Y+I+  G  +    ++A ++   +       + V F  +I    
Sbjct: 568 LYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALL 627

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G  + A+++F  +  +G+ P++ T+  +     E       + +   M+  G  P  +
Sbjct: 628 KGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAP--N 685

Query: 495 TFLLLAEARR 504
           + +L A  RR
Sbjct: 686 SHMLNALVRR 695



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 195/402 (48%), Gaps = 14/402 (3%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALT------IQKRFNSIHSIMSQVEENGMDPDSI 143
           EA  +F+ L+      S+  +  LL  ++        +R  S+ + M++   + + P++ 
Sbjct: 32  EALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNAC 91

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            ++ +I  F   G +E     F  + ++G        + L+KG   A + +E+  +L L 
Sbjct: 92  TYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLR 151

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
             E    P++  YN ++  +  E  + +A+N+  +M   G+ P+VVTY T+     +   
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D+A+ V  +M   GV+P+  T   +I GY   GK KE ++    M  +G+ P+ + + L
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271

Query: 324 LIKGFVEIMDRDG--VDEVLALMKEFR--VNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           L+    + + ++G   +  L     FR  + PDV  Y+ +++ ++T G + +     D M
Sbjct: 272 LL----DYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLM 327

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G+ P+   ++I+   Y ++   E+A  +   M + G  P+VV F  +I   C  G +
Sbjct: 328 VGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRV 387

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           D A+  F++M   GV+PN+  F +L++G     +  +AEE+ 
Sbjct: 388 DDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELF 429



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 180/362 (49%), Gaps = 1/362 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L+++L + G+  +A   FN +I  G  P++  +++L+  L    ++     +  
Sbjct: 371 VVSFGALIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFF 430

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +V + G+  D++FFN ++      G + EA      M   G+ P   +YNTL+ G+ + G
Sbjct: 431 EVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTG 490

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+ KLLD+M   G +KPN  TY +L+R +C  + + +A+++  +M   G+ P V TY
Sbjct: 491 RIDEAAKLLDVMVSNG-LKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATY 549

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NTI     Q G   +A E+ + M ++  + +  T  II++G CK   + EA +  R +  
Sbjct: 550 NTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCS 609

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
                + V FN++I   ++   ++   ++ A +  + + PDV+TY  I       G + +
Sbjct: 610 KDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGE 669

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F  M K+G  P++H  + L +  +   +  +A   L  + E  F       + +IS
Sbjct: 670 FDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLIS 729

Query: 432 GW 433
            +
Sbjct: 730 LY 731



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 68/313 (21%), Positives = 149/313 (47%), Gaps = 3/313 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++  C        LM +L   G+  EAQ + + +I  G +P++++Y TL+A   +  R 
Sbjct: 433 LDQGICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRI 492

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    ++  +  NG+ P+   +  ++  + ++  +++A   F +M   G+TP  +TYNT+
Sbjct: 493 DEAAKLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTI 552

Query: 184 IKGYGIAGKPEESVKL-LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           + G    G+  E+ +L L++++     K ++ TYN+++   C    + EA+ +  ++ + 
Sbjct: 553 LHGLFQTGRFSEANELYLNMIN--SRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSK 610

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
             + D VT+N +  A  + G  + A ++   +   G+ P+  T  +I     +EG + E 
Sbjct: 611 DPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEF 670

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M++ G  PN  + N L++  +   D       L  + E   + +  T S +++ 
Sbjct: 671 DGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISL 730

Query: 363 WSTAGFMDKCKEI 375
           +S   +    K +
Sbjct: 731 YSRGEYQPHAKSL 743


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/468 (26%), Positives = 223/468 (47%), Gaps = 36/468 (7%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+ ++N ++E G  P++VTY T+L +   +        ++ Q++  G  P+ + +N ++N
Sbjct: 186 AREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVN 245

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
             S SG ME+A +    M   GL  +  TY+ LI+GY   G+ EE+ +L + M   G V 
Sbjct: 246 GLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAV- 304

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P + TYN ++   C    +++A  ++  M    + PD+V+YNT+   Y + G   +A  +
Sbjct: 305 PTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLL 364

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             E+ +  + P+  T   +I G C+ G +  A+R    M ++G  P++  F   ++GF +
Sbjct: 365 FAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCK 424

Query: 331 I----MDRDGVDEVL-------------ALMKEFRVN------------------PDVIT 355
           +    M ++  DE+L              ++ E ++                   PD+IT
Sbjct: 425 MGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLIT 484

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+  ++     G + +  E+   M   G+ PD   Y+ +   ++      KA  L + M+
Sbjct: 485 YNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEML 544

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G  P+VV +T +I  +   G +  AI  F +M E GV PN+ T+  L+ G  + R+  
Sbjct: 545 SKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMD 604

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           +A      M+A G+ P K T+ +L       G  +EA R+   + ++E
Sbjct: 605 QAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDRE 652



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 216/433 (49%), Gaps = 6/433 (1%)

Query: 83  IERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI---HSIMSQVEENGMD 139
           +++   ++   +F  ++  G  P +     +L  L  + R N+I     + + + E G+ 
Sbjct: 142 VKKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLL--RDRDNNIDVAREVYNVMVECGIC 199

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P  + +N ++++F + G ++EA+   ++M+  G +P   TYN L+ G   +G+ E++ +L
Sbjct: 200 PTVVTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKEL 259

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           +  M R G ++ ++ TY+ L+R +C +  I EA  +  +M + G  P VVTYNTI     
Sbjct: 260 IQDMLRLG-LEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLC 318

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           + G    A +++  M +  + P+  +   +I GY + G I EA      ++   + P++V
Sbjct: 319 KWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVV 378

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            +N LI G   + D D    +   M +   +PDV T++T +  +   G +   KE+FD+M
Sbjct: 379 TYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEM 438

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G++PD  AY     G ++  +P KA  +   M+  GF P+++ +   I G    G++
Sbjct: 439 LNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNL 498

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             A E+  KM  +G+ P+  T+ +++  +  A    +A  +   M + G+ P   T+ +L
Sbjct: 499 KEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVL 558

Query: 500 AEARRATGLTKEA 512
             +    G  K A
Sbjct: 559 IHSYAVRGRLKLA 571



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 220/461 (47%), Gaps = 18/461 (3%)

Query: 75  MTKLMNSLIERGKPQEAQAIFN-NLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + +++N++  R +P  A   F     + G K S ++Y+ +L  L       S + +M +V
Sbjct: 50  LVRVLNTV--RNRPVVALRFFRWAERQTGFKRSEISYSVILDILARNGLMRSAYCVMEKV 107

Query: 134 ----EENG-----------MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
                ENG           M    +  + ++  + +   +E+ +  F+KM   GL P   
Sbjct: 108 VSVKMENGVIDVVSSSEVSMPSVKLILDLLLWIYVKKSLLEKCLLVFYKMVSKGLLPDVK 167

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
             N +++         +  + +  +  E  + P + TYN ++ ++C +  + EA  ++ +
Sbjct: 168 NCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKGMVQEALQLLFQ 227

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M A G  P+ VTYN +    + +GE +QA+E+I +M   G++ +  T   +I GYC++G+
Sbjct: 228 MQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQ 287

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           I+EA R    M   G  P +V +N ++ G  +        ++L +M    + PD+++Y+T
Sbjct: 288 IEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNT 347

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++  ++  G + +   +F ++    + P    Y+ L  G  R  + + A  L   MI+ G
Sbjct: 348 LIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHG 407

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P+V  FTT + G+C  G++  A E+FD+M   G+ P+   + T + G  +   P +A 
Sbjct: 408 PDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAF 467

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + + M A G  P   T+ +  +     G  KEA  ++ K+
Sbjct: 468 GMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKM 508



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 184/395 (46%), Gaps = 1/395 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   L+    E+G+ +EA  +   ++  G  P++VTY T++  L    R +    ++
Sbjct: 271 SVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLL 330

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +    + PD + +N +I  ++  GN+ EA   F +++   L P+  TYNTLI G    
Sbjct: 331 DVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRL 390

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  + +++L D M + G   P++ T+   VR +C   N+  A  +  +M   G++PD   
Sbjct: 391 GDLDVAMRLKDEMIKHGP-DPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFA 449

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T      + G+  +A  +  EM   G  P+  T  + I G  K G +KEA    + M 
Sbjct: 450 YITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKML 509

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P+ V +  +I   +          +   M    + P V+TY+ ++++++  G + 
Sbjct: 510 YNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLK 569

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                F +M + G+ P+   Y+ L  G  + ++ ++A      M   G  PN   +T +I
Sbjct: 570 LAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILI 629

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +  C+ G    A+ ++  M +  + P+  T  +L+
Sbjct: 630 NENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLL 664



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 154/333 (46%), Gaps = 1/333 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +NK     + S   L+      G   EA  +F  L      PS+VTY TL+  L      
Sbjct: 334 VNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDL 393

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +  ++ ++G DPD   F   +  F + GN+  A + F +M   GL P    Y T 
Sbjct: 394 DVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITR 453

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G    G P ++  + + M   G   P+L TYNV +       N+ EA  ++ KM  +G
Sbjct: 454 IVGELKLGDPSKAFGMQEEMLARG-FPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNG 512

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           + PD VTY +I  A+   G   +A  + +EM   G+ P+  T  ++I  Y   G++K A+
Sbjct: 513 LVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAI 572

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M E GVHPN++ +N LI G  ++   D      A M+   ++P+  TY+ ++N  
Sbjct: 573 LHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINEN 632

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              G   +   ++ DM    I+PD+  +  L K
Sbjct: 633 CNLGHWQEALRLYKDMLDREIQPDSCTHRSLLK 665


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/519 (25%), Positives = 226/519 (43%), Gaps = 76/519 (14%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S+   + SL+   + ++   +F+ ++E G +P    Y   + A            +M
Sbjct: 146 SVASLNLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELM 205

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + ++  G+ P    +N VI    +   M++A   F +M +  + P   TYNTLI GY   
Sbjct: 206 TCMKRGGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKV 265

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ EE+  + + M  E NV+P + T+N L+   C  + + EA  V+ +M   G  PD  T
Sbjct: 266 GQLEEAFNIRERMKVE-NVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFT 324

Query: 251 YNTIATAYAQNGEAD-----------------------------------QAEEVIVEME 275
           Y T+   + + G  D                                   +AEEV+ +  
Sbjct: 325 YTTLFDGHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFL 384

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
            NG+ P G     I++GYC+ G I +A      M+  G+ PN V +N L+K F E+ + +
Sbjct: 385 ENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNME 444

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
             ++ +  M E  V P+V TY+T+++ +  +   D+C +I ++M K G+KP+  +Y  L 
Sbjct: 445 EAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLI 504

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
               ++    +AE +L  M+  G  PN  I+  +I G C  G +  A   FD+M    + 
Sbjct: 505 NCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIV 564

Query: 456 PNLK-----------------------------------TFETLMWGYSEARQPWRAEEI 480
           P L                                    T+ +L+ GYS A    +A E+
Sbjct: 565 PTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALEL 624

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + MK  G+ P  +T+      R   G  KE   ++ KI
Sbjct: 625 YETMKKSGIKPTLNTY-----HRLIAGCGKEGLVLVEKI 658



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 206/449 (45%), Gaps = 43/449 (9%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N+L + G  ++A+ +    +E G  P  V + T++         N  ++ + ++E  G
Sbjct: 363 LLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYTTIEKMEAVG 422

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ + +N+++  F E  NMEEA     KM E G+ P   TYNTLI GYG +   +   
Sbjct: 423 LRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCF 482

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD---------- 247
           ++L+ M ++G +KPN+ +Y  L+   C + NI EA  ++  M   G+ P+          
Sbjct: 483 QILEEMEKKG-LKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDG 541

Query: 248 -------------------------VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
                                    +VTYN +     + G+  +AE +  E+   G+  +
Sbjct: 542 SCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFD 601

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG---VDE 339
             T   +ISGY   G +++AL    TMK+ G+ P L  ++ LI G      ++G   V++
Sbjct: 602 VITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAG----CGKEGLVLVEK 657

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +   M +  + PD + Y+ +++ +   G + K   +   M   GI+PD   Y+ L  G+ 
Sbjct: 658 IYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHF 717

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +E    K + L+  M   G  P    +  +I G C     D A   + +M E+G +P++ 
Sbjct: 718 KEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVS 777

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFG 488
             + L+ G  E  +   A+ I   M   G
Sbjct: 778 ICDNLITGLREEGRSHDADVICSEMNMKG 806



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 183/380 (48%), Gaps = 1/380 (0%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           +F + +++  SES  + E+ + +  MK+ G+ P+ ++ N  ++      + E++++L   
Sbjct: 113 LFSDMLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSE 172

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           +   G ++P+   Y   ++A     ++  A  +M  M   G+ P V  YN +     +  
Sbjct: 173 IVESG-LRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEK 231

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
               AE++  EM    V PN  T   +I GYCK G+++EA      MK   V P ++ FN
Sbjct: 232 RMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFN 291

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            L+ G       +    VL  M+ +   PD  TY+T+ +     G +D    + ++  + 
Sbjct: 292 SLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDASITLSEEAVRK 351

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G++   +  SIL     +E   EKAEE+L   +E+G  P  V F TI++G+C  G +++A
Sbjct: 352 GVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKA 411

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
               +KM   G+ PN  T+ +L+  + E +    AE+ ++ M   GV P   T+  L + 
Sbjct: 412 YTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDG 471

Query: 503 RRATGLTKEAKRILSKIKNK 522
              + L     +IL +++ K
Sbjct: 472 YGRSCLFDRCFQILEEMEKK 491



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/268 (25%), Positives = 129/268 (48%), Gaps = 43/268 (16%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           +E   T+ +   L+N L ++GK  EA+ + + +   G    ++TY               
Sbjct: 561 REIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITY--------------- 605

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
                               N++I+ +S +GN+++A++ +  MK+SG+ PT +TY+ LI 
Sbjct: 606 --------------------NSLISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIA 645

Query: 186 GYGIAGKPEESVKLLDLMSRE---GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           G G     +E + L++ + +E    N+ P+   YN L+  +    ++ +A ++   M A 
Sbjct: 646 GCG-----KEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQ 700

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G++PD +TYN +   + + G   + + ++ +M+  G+ P   T  I+I G+CK      A
Sbjct: 701 GIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGA 760

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             + R M E G  P++ I + LI G  E
Sbjct: 761 YVWYREMFENGFTPSVSICDNLITGLRE 788


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/502 (24%), Positives = 227/502 (45%), Gaps = 56/502 (11%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P++VTY T++ A    KR +    ++  +   G++P+ + +N VIN     G +EE    
Sbjct: 236 PNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGV 295

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
             +M   G  P   TYNTL+ GY   G   +++ L   M R G + P++ TY  L+   C
Sbjct: 296 LAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNG-LPPDVVTYTSLINTMC 354

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
              N+  A     +M   G++P+ VTY ++   ++Q G  D+A  +  EM  +G  P   
Sbjct: 355 KAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIV 414

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T   +++G+C  G+++EA+   R M+  G+ P++V ++ +I GF    + D   ++ A M
Sbjct: 415 TYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEM 474

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            E  V+PD ITYS+++        +++  ++F +M    + PD   Y+ L  GY +E + 
Sbjct: 475 VEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDL 534

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISG-------------------------------- 432
            +A  L   MI+ GF P+ V +  +I+G                                
Sbjct: 535 NEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTL 594

Query: 433 ------------------WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
                             +C  G M+ A +VF+ M +    PN   +  ++ G+      
Sbjct: 595 IESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNV 654

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI 534
            +A ++ + M  FG  P   T + L +A  + G+ ++   ++  I    + ++ E     
Sbjct: 655 HKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQLNLVIRDILRSCKLSDAELS--- 711

Query: 535 PVESLERLYHKEATTASYPNLL 556
             ++L ++ HKE    +  NLL
Sbjct: 712 --KALVQINHKEGNIDAVFNLL 731



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/386 (29%), Positives = 199/386 (51%), Gaps = 2/386 (0%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGN-MEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
           +I+   + NG  P  + +NA++++       +  A   + +M  SG++    +YN LI+G
Sbjct: 153 NIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRG 212

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
           +  AG  E  ++  + M R     PN+ TYN ++ A+C  K I EA+ ++  M   G++P
Sbjct: 213 FCAAGNLEMGLRFFEEMERN-RCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEP 271

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           +++TYN +     + G  ++   V+ EM+  G  P+G T   +++GYCK G   +AL   
Sbjct: 272 NLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALVLH 331

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             M   G+ P++V +  LI    +  + +   E    M    + P+ +TY++++N +S  
Sbjct: 332 SEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQK 391

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           GFMD+   I+D+M ++G  P    Y+ L  G+      E+A  LL  M   G  P+VV +
Sbjct: 392 GFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSY 451

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           +TII+G+C    +DRA ++  +M E GVSP+  T+ +L+ G  E R+   A ++ Q M  
Sbjct: 452 STIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLN 511

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEA 512
             + P + T+  L       G   EA
Sbjct: 512 KSLLPDEFTYTSLINGYCKEGDLNEA 537



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 210/414 (50%), Gaps = 8/414 (1%)

Query: 72  VRSMTKLMNSLIERGKPQ-EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           V S   +++S++   KP   A+ ++  +I  G   ++ +Y  L+                
Sbjct: 167 VLSYNAILDSIVRCRKPVIFAEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFF 226

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++E N   P+ + +N VI A+ +   ++EA      M   GL P   TYN +I G    
Sbjct: 227 EEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRV 286

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ EE+  +L  M R+G   P+  TYN LV  +C   N  +A  +  +M  +G+ PDVVT
Sbjct: 287 GRIEETSGVLAEMDRKG-FAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVT 345

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y ++     + G  ++A E   +M   G++PNG T   +I+G+ ++G + EA R    M 
Sbjct: 346 YTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMI 405

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
             G  P +V +N L+ G   +  R  ++E + L++      ++PDV++YSTI+  +    
Sbjct: 406 RSGFPPTIVTYNALLNGHC-VSGR--MEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQ 462

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +D+  ++  +M + G+ PDA  YS L +G   ++   +A +L   M+     P+   +T
Sbjct: 463 ELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYT 522

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           ++I+G+C +G ++ A+ + D+M + G  P+  T+  L+ G ++  +   A+ +L
Sbjct: 523 SLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLL 576



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 196/384 (51%), Gaps = 19/384 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   + G   +A  + + ++  G  P +VTYT+L+  +      N       Q+   G
Sbjct: 314 LVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRG 373

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ + + ++IN FS+ G M+EA   + +M  SG  PT  TYN L+ G+ ++G+ EE++
Sbjct: 374 LRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAI 433

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M  +G + P++ +Y+ ++  +C  + +  A+ +  +M   G+ PD +TY+++   
Sbjct: 434 GLLRGMEGKG-LSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQG 492

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    ++A ++  EM +  + P+  T   +I+GYCKEG + EAL     M + G  P+
Sbjct: 493 LCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPD 552

Query: 318 LVIFNLLIKGF-VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS------------ 364
            V +N+LI G   +   R+    +L L  +  + P+ ITY T++ + S            
Sbjct: 553 TVTYNVLINGLNKQARTREAKRLLLKLFYDESI-PNGITYDTLIESCSDIEFKSVVALIK 611

Query: 365 ---TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                G M++  ++F+ M K   KP+   Y+++  G+ R+    KA +L   M++ GF P
Sbjct: 612 GFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIP 671

Query: 422 NVVIFTTIISGWCSDGSMDRAIEV 445
           + V    ++    S+G MD  + +
Sbjct: 672 HTVTIIALVKALYSEG-MDEQLNL 694



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 86/344 (25%), Positives = 156/344 (45%), Gaps = 34/344 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L+N     G+ +EA  +   +   G  P +V+Y+T++A     +  +    + 
Sbjct: 412 TIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMN 471

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++ E G+ PD+I ++++I    E   + EA D F +M    L P   TY +LI GY   
Sbjct: 472 AEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKE 531

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E++ L D M ++G + P+  TYNVL+     +    EA  ++ K+      P+ +T
Sbjct: 532 GDLNEALNLHDEMIKKGFL-PDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGIT 590

Query: 251 YNTIATA---------------YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
           Y+T+  +               +   G  ++A++V   M     +PN     +II G+C+
Sbjct: 591 YDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQKPNEAVYNVIIHGHCR 650

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           +G + +A +  + M ++G  P+ V    L+K        +G+DE L L     V  D++ 
Sbjct: 651 DGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYS----EGMDEQLNL-----VIRDILR 701

Query: 356 YSTIMNA-WSTA--------GFMDKCKEIFDDMGKAGIKPDAHA 390
              + +A  S A        G +D    +  +M K G  P   A
Sbjct: 702 SCKLSDAELSKALVQINHKEGNIDAVFNLLTEMAKDGFLPSGAA 745


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 219/442 (49%), Gaps = 1/442 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L + GK ++A+A+F  + E G     V YTTL+  L       +   +  ++ E  
Sbjct: 495 LVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKN 554

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD++ +N  IN     G  +EA     +M+ +GL P   TYNT+I      GK  +++
Sbjct: 555 LLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKAL 614

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL+ M R  ++KPNL TY+ L+        + +A  ++++M++SG  P  +T+  +  A
Sbjct: 615 KLLNGMKRS-SIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQA 673

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            +Q   +D   E+   M + G+  +      ++   C  G  ++A+     M   G+ P+
Sbjct: 674 CSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPD 733

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + FN LI G  +    D        M    ++P+V T++T++    +AG + +   + +
Sbjct: 734 TITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDMVLN 793

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K GI+P    Y IL  GY ++    +A  L   M+  GF P V  +  +IS +   G
Sbjct: 794 EMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVG 853

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M +A E+F++M   GV P   T++ L+ G+S+ R      + L+ MK  G  P K T  
Sbjct: 854 MMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLS 913

Query: 498 LLAEARRATGLTKEAKRILSKI 519
            ++ A    G++ EA+R+L  +
Sbjct: 914 SISRAFSKPGMSWEARRLLKNL 935



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 215/475 (45%), Gaps = 41/475 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T LM+ L + GK  EA+ +F + +   H P+ VTYT L+ AL      +    ++S++EE
Sbjct: 353 TALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEE 412

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY-------- 187
             + P+ + F+++IN   + G + +A D   +MKE G+ P   TY T+I G         
Sbjct: 413 KSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEA 472

Query: 188 -----------GIA----------------GKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
                      G+                 GK E++  L   M+  G +  ++  Y  L+
Sbjct: 473 ALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHV-NYTTLI 531

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
                  N+  A+ V  ++    + PD V YN         G++ +AE  + EM+  G++
Sbjct: 532 DGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLK 591

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+  T   +I+   +EGK  +AL+    MK   + PNL+ ++ LI G  E    +    +
Sbjct: 592 PDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYL 651

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L  M     +P  +T+  ++ A S     D   EI + M  AG+  D   Y+ L +    
Sbjct: 652 LNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCY 711

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
                KA  +L  M   G  P+ + F  +I G    G +D A   +D+M  HG+SPN+ T
Sbjct: 712 NGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVAT 771

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           F TL+ G   A +   ++ +L  MK  G+ P   T+ +L      TG  K++ ++
Sbjct: 772 FNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDIL-----VTGYGKQSNKV 821



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 214/451 (47%), Gaps = 1/451 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +++ L+  L + G+  EA A+F  + + G  P+ VTY  L+  L   +R N   S++ 
Sbjct: 279 VVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLG 338

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +V   G+  D I + A+++   + G ++EA D F        TP   TY  LI     AG
Sbjct: 339 EVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAG 398

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + + ++L  M  E ++ PN+ T++ ++        + +A + M +M   G+ P+VVTY
Sbjct: 399 NVDGAEQVLSEM-EEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTY 457

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+     +    + A +V  EM   GV+ N      +++G  K GKI++A    R M E
Sbjct: 458 GTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNE 517

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV  + V +  LI G  +  +     +V   + E  + PD + Y+  +N     G   +
Sbjct: 518 RGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKE 577

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +   ++M   G+KPD   Y+ +     RE +  KA +LL  M  S   PN++ ++T+I 
Sbjct: 578 AESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIV 637

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G    G++++A  + ++M   G SP   T   ++   S+ R+     EI + M   G+  
Sbjct: 638 GLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCA 697

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             + +  L       G+T++A  +L ++  +
Sbjct: 698 DITVYNTLVRVLCYNGMTRKAMVVLEEMSGR 728



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 205/445 (46%), Gaps = 3/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L   G+   A+ + + +   G +P++VTYT  +     +   +   S+  ++   G
Sbjct: 215 LVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKG 274

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD +  +A++    + G   EA   F +M++ G  P   TY  LI     A +  ES+
Sbjct: 275 VLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESL 334

Query: 198 KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            LL +++SR   V  +L  Y  L+   C E  I EA ++     +    P+ VTY  +  
Sbjct: 335 SLLGEVVSR--GVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLID 392

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A  + G  D AE+V+ EME   + PN  T   II+G  K G + +A  + R MKE G+ P
Sbjct: 393 ALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDP 452

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N+V +  +I G  + + ++   +V   M    V  +     +++N     G ++K + +F
Sbjct: 453 NVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALF 512

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M + G+  D   Y+ L  G  +      A ++   + E    P+ V++   I+  C  
Sbjct: 513 REMNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCML 572

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G    A    ++M   G+ P+  T+ T++   S   +  +A ++L  MK   + P   T+
Sbjct: 573 GKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITY 632

Query: 497 LLLAEARRATGLTKEAKRILSKIKN 521
             L       G  ++AK +L+++ +
Sbjct: 633 STLIVGLFEAGAVEKAKYLLNEMSS 657



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/455 (23%), Positives = 214/455 (47%), Gaps = 9/455 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL----AALTIQKRFNSIH 127
           V + + ++N L++RG   +A      + E G  P++VTY T++      L  +   +  H
Sbjct: 419 VVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYH 478

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            ++ +    G++ +    ++++N   ++G +E+A   F +M E G+      Y TLI G 
Sbjct: 479 EMLCE----GVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGL 534

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G    + K+   ++ E N+ P+   YNV +   C      EA + + +M ++G+KPD
Sbjct: 535 FKTGNLPAAFKVGQELT-EKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPD 593

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
            VTYNT+  A ++ G+  +A +++  M+ + ++PN  T   +I G  + G +++A     
Sbjct: 594 QVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLN 653

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M   G  P  +    +++   +    D + E+   M    +  D+  Y+T++      G
Sbjct: 654 EMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNG 713

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
              K   + ++M   GI PD   ++ L  G+ +    + A      M+  G  PNV  F 
Sbjct: 714 MTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFN 773

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T++ G  S G +  +  V ++M + G+ P+  T++ L+ GY +      A  +   M   
Sbjct: 774 TLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGK 833

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G  P+ ST+  L       G+  +AK + ++++N+
Sbjct: 834 GFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNR 868



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 193/430 (44%), Gaps = 10/430 (2%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           L+        V+Y  +++  + Q    +  ++++++ + G+  D++  N V+      G 
Sbjct: 94  LLRSSESVDTVSYNVVMSGFSEQGGL-APEALLAEMCKRGVPFDAVTVNTVLVGLCRDGR 152

Query: 158 MEEAMDTFWKMKESGLTPTTST--YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
           ++ A      M   G         +N+L+ GY   G  E +  + + M  +G V  ++  
Sbjct: 153 VDRAAALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQG-VGVDVVG 211

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           YN LV   C    +  A +++  M   G++P+VVTY      Y +    D A  +  EM 
Sbjct: 212 YNSLVAGLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMV 271

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
             GV P+  T   ++ G CK+G+  EA    R M++ G  PN V + +LI    +     
Sbjct: 272 RKGVLPDVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRG- 330

Query: 336 GVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
             +E L+L+ E     V  D+I Y+ +M+     G +D+ K++F         P+   Y+
Sbjct: 331 --NESLSLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYT 388

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           +L     +    + AE++L  M E    PNVV F++II+G    G + +A +   +M E 
Sbjct: 389 VLIDALCKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKER 448

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G+ PN+ T+ T++ G  +      A ++   M   GV   K     L    +  G  ++A
Sbjct: 449 GIDPNVVTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKA 508

Query: 513 KRILSKIKNK 522
           + +  ++  +
Sbjct: 509 EALFREMNER 518



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 145/306 (47%), Gaps = 1/306 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L+  L E G  ++A+ + N +   G  P+ +T+  +L A +  +R + I  I   +  
Sbjct: 633 STLIVGLFEAGAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMN 692

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+  D   +N ++     +G   +AM    +M   G+ P T T+N LI G+  +G  + 
Sbjct: 693 AGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDN 752

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +    D M   G + PN+ T+N L+    +   I E+  V+++M   G++P  +TY+ + 
Sbjct: 753 AFSTYDQMLYHG-ISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILV 811

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           T Y +     +A  +  EM   G  P   T   +IS + K G + +A      M+  GV 
Sbjct: 812 TGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVL 871

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P    +++L+ G+ ++ +   V + L  MKE   +P   T S+I  A+S  G   + + +
Sbjct: 872 PTSCTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRL 931

Query: 376 FDDMGK 381
             ++ K
Sbjct: 932 LKNLYK 937



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 114/274 (41%), Gaps = 37/274 (13%)

Query: 44  QLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH 103
           Q  S  + +D   + H  + MN   C  +     L+  L   G  ++A  +   +   G 
Sbjct: 672 QACSQGRRSDLILEIH-EWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLEEMSGRGI 730

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
            P  +T+  L+         ++  S   Q+  +G+ P+   FN ++     +G + E+  
Sbjct: 731 APDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAGRIGESDM 790

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              +MK+ G+ P+  TY+ L+ GYG      E+V+L                       +
Sbjct: 791 VLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRL-----------------------Y 827

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C             +M   G  P V TYN + + +++ G   QA+E+  EM++ GV P  
Sbjct: 828 C-------------EMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTS 874

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            T  I++SG+ K     E  +F + MKE G  P+
Sbjct: 875 CTYDILVSGWSKLRNGTEVRKFLKDMKEKGFSPS 908



 Score = 59.3 bits (142), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 1/152 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+  L   G+  E+  + N + + G +PS +TY  L+     Q        +  
Sbjct: 769 VATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYC 828

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  P    +NA+I+ FS+ G M +A + F +M+  G+ PT+ TY+ L+ G+    
Sbjct: 829 EMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLR 888

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              E  K L  M  +G   P+  T + + RA+
Sbjct: 889 NGTEVRKFLKDMKEKG-FSPSKGTLSSISRAF 919


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/460 (27%), Positives = 224/460 (48%), Gaps = 39/460 (8%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M  E+  T  S T LM +L    +  +A  +  ++   G +P +VTY TL+  L      
Sbjct: 105 MAHETRPTAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADV 164

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    ++ ++ E+G++P+ + ++ ++  + ++G  E     F +M   G+ P    Y  L
Sbjct: 165 DKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGL 224

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I      GK +++ +++D M   G ++PN+ TYNVL+ + C E ++ EA ++ + M   G
Sbjct: 225 IDSLCREGKVKKATQVMDKMMERG-LEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKG 283

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG--VQPNGRTCGIIISGYCKEGKIKE 301
           +  D VTYNT+ T  +   E D+A  ++ EM H    V+PN  T   +I G CK G++++
Sbjct: 284 VALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQ 343

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFV---------EIMDR------------------ 334
           A +    M E G   NLV FNLLI G +         E+MD                   
Sbjct: 344 AFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILIN 403

Query: 335 --------DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
                   D  + +L+ M+   + P+++ Y  ++ A    G M++ +  FD+M K   K 
Sbjct: 404 GFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-NCKL 462

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D  AYS +  G  R ++ + AEE L  M++ G  P+ V ++ +I+ + + G +  A  V 
Sbjct: 463 DVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVL 522

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            +M   G  P++  F++L+ GY       +  E+++ M A
Sbjct: 523 KQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTA 562



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 226/488 (46%), Gaps = 72/488 (14%)

Query: 68  SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           S R   S   ++ +L  +G   +A      ++    +P+ V+YTTL+ AL  ++R     
Sbjct: 74  SVRDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETRPTAVSYTTLMRALCAERRTGQAV 133

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            ++  ++ +G+ PD + +  +I    ++ ++++A++   +M ESG+ P    Y+ L++GY
Sbjct: 134 GLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGY 193

Query: 188 GIAGKPEESVK-------------------LLDLMSREGNVK---------------PNL 213
             AG+ E   K                   L+D + REG VK               PN+
Sbjct: 194 CKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNV 253

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            TYNVL+ + C E ++ EA ++ + M   G+  D VTYNT+ T  +   E D+A  ++ E
Sbjct: 254 VTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEE 313

Query: 274 MEHNG--VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
           M H    V+PN  T   +I G CK G++++A +    M E G   NLV FNLLI G + +
Sbjct: 314 MIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRV 373

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
                                                + K  E+ D+M  +G++PD+  Y
Sbjct: 374 HK-----------------------------------VKKAMELMDEMASSGLEPDSFTY 398

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           SIL  G+ +  + ++AE LL  M   G  P +V +  +++  C  G M++A   FD+M  
Sbjct: 399 SILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEM-H 457

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
                ++  + T++ G    R    AEE L+ M   G+ P   T+ +L      +G    
Sbjct: 458 KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGA 517

Query: 512 AKRILSKI 519
           A+R+L ++
Sbjct: 518 AERVLKQM 525



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 181/349 (51%), Gaps = 13/349 (3%)

Query: 179 TYNTLIKGYGI-AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
           +YNT++       G  + ++ LL +M+ E   +P   +Y  L+RA C E+   +A  ++ 
Sbjct: 80  SYNTVLAALCRQGGCLDAALFLLRVMAHE--TRPTAVSYTTLMRALCAERRTGQAVGLLR 137

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
            M ASG++PDVVTY T+        + D+A E++ EM  +G++PN      ++ GYCK G
Sbjct: 138 DMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAG 197

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG----VDEVLALMKEFRVNPDV 353
           + +   +    M   G+ P++V++     G ++ + R+G      +V+  M E  + P+V
Sbjct: 198 RWECVSKVFEEMSGRGIEPDVVMYT----GLIDSLCREGKVKKATQVMDKMMERGLEPNV 253

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           +TY+ ++N+    G + +   + ++M + G+  DA  Y+ L  G     E ++A  LL  
Sbjct: 254 VTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEE 313

Query: 414 MI--ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
           MI  E+   PNVV F ++I G C  G M +A +V D M E+G + NL TF  L+ G    
Sbjct: 314 MIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRV 373

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            +  +A E++  M + G+ P   T+ +L            A+ +LSK++
Sbjct: 374 HKVKKAMELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMR 422



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 186/356 (52%), Gaps = 4/356 (1%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++SL   GK ++A  + + ++E G +P++VTY  L+ ++  +       S+ + + E
Sbjct: 222 TGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLE 281

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM--KESGLTPTTSTYNTLIKGYGIAGKP 193
            G+  D++ +N +I   S    M+EAM    +M   E+ + P   T+N++I G    G+ 
Sbjct: 282 KGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRM 341

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ ++ D+M+  G    NL T+N+L+        + +A  +M +MA+SG++PD  TY+ 
Sbjct: 342 RQAFQVRDMMAENG-CACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSI 400

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + +  + D+AE ++ +M  +G++P       +++  C++G +++A  F   M +  
Sbjct: 401 LINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-N 459

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              ++V ++ +I G   + DR   +E L  M +  + PD +TYS ++N ++ +G +   +
Sbjct: 460 CKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAE 519

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +   M  +G  PD   +  L KGY  + + EK  EL+  M       +  I +TI
Sbjct: 520 RVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTI 575


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/469 (27%), Positives = 218/469 (46%), Gaps = 10/469 (2%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L++  + +G   EA  I   +   G +P+ +TY  L+  L    R      I+ Q+ +
Sbjct: 352 STLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTK 411

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G   D++ +N VI       N EEA     +M++ G++P   TY+ +I G    G+ E 
Sbjct: 412 IGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESER 471

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  LL+ M  +G +KPN   Y  L+  +C E + + A   + KM    + PD+  YN++ 
Sbjct: 472 ASGLLEQMIADG-LKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLI 530

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              +  G+ D+A E   EM   G QPN  T G +I GY   G +++A +    M   G++
Sbjct: 531 IGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLN 590

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN  I+  +++G+ +  + + V   L  M E  + PD   Y  +++  S++G M     +
Sbjct: 591 PNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSV 650

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
              + K G+ PD+  Y  L  G+ +  + EKA  LL  M + G  P +  +  +I G+C 
Sbjct: 651 LSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCK 710

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              +  A  +F+ +   G+ PN  T+ TL+ GY +A     A ++   M   GV P    
Sbjct: 711 SDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFV 770

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYH 544
           + +LA     +G  ++A  I         T EM A     + S   L H
Sbjct: 771 YSVLAAGCSNSGDLQQALFI---------TEEMIARGYAIISSFNTLVH 810



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 215/425 (50%), Gaps = 1/425 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++  + G+ ++   +   + + G  PSL     LL  L      + +  +   +E  G
Sbjct: 179 LVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAG 238

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   ++ +I A+ +  ++E A     +M+E+G +    TYNTLI G   AG  EE+ 
Sbjct: 239 ISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAF 298

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M   G V P+  TY  ++   C      +A  ++ +M+ +G+ P+VV Y+T+   
Sbjct: 299 GYKKEMEDYGLV-PDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDG 357

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G AD+A +++ EM   GVQPN  T   +I G CK G++  A R  + M + G   +
Sbjct: 358 FMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMAD 417

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +NL+I+G +   +++    +L  M++  ++P+V TYS I+N     G  ++   + +
Sbjct: 418 TMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLE 477

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G+KP+A  Y+ L  GY RE     A E L  M      P++  + ++I G  + G
Sbjct: 478 QMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVG 537

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            MD AIE +D+M E G  PN  T+  L+ GYS A    +AE++L  M   G++P    + 
Sbjct: 538 KMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYA 597

Query: 498 LLAEA 502
            + E 
Sbjct: 598 QILEG 602



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/410 (25%), Positives = 198/410 (48%), Gaps = 2/410 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + ++N L + G+ + A  +   +I  G KP+   Y  L++    +  F+     + 
Sbjct: 453 VYTYSIIINGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLK 512

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++    + PD   +N++I   S  G M+EA++ + +M E G  P   TY  LI GY +AG
Sbjct: 513 KMTRENLTPDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAG 572

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E++ +LL  M   G + PN   Y  ++  +    N+ +  + +  M   G+ PD   Y
Sbjct: 573 NLEKAEQLLHQMLNSG-LNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLY 631

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +    + +G    A  V+  +E NG+ P+    G +ISG+CK   +++A+     M +
Sbjct: 632 GIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAK 691

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P +  +N LI GF +  D      +   +    + P+ +TY+T+++ +  AG +  
Sbjct: 692 KGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRD 751

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             +++++M   G+ PDA  YS+LA G     + ++A  +   MI  G+   +  F T++ 
Sbjct: 752 AIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGY-AIISSFNTLVH 810

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           G+C  G +   ++    M +  + P+L T E ++ G  EA +   A  I 
Sbjct: 811 GFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIF 860



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 212/460 (46%), Gaps = 44/460 (9%)

Query: 98  LIEG-GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESG 156
            +EG G  P + TY+TL+ A    +   S   ++ ++ E G   + + +N +I     +G
Sbjct: 233 FMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAG 292

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            +EEA     +M++ GL P   TY  +I G    G+P+++  LLD MS  G + PN+  Y
Sbjct: 293 AIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAG-LMPNVVVY 351

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM-- 274
           + L+  +  + N  EA+ ++ +M+A+G++P+ +TY+ +     + G   +A  ++ +M  
Sbjct: 352 STLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTK 411

Query: 275 -------------------EHN--------------GVQPNGRTCGIIISGYCKEGKIKE 301
                              +HN              G+ PN  T  III+G C+ G+ + 
Sbjct: 412 IGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESER 471

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A      M   G+ PN  ++  LI G+          E L  M    + PD+  Y++++ 
Sbjct: 472 ASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLII 531

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
             S  G MD+  E +D+M + G +P+   Y  L  GY      EKAE+LL  M+ SG +P
Sbjct: 532 GLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNP 591

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           N  I+  I+ G+    ++++       M E G+ P+ + +  ++   S +     A  +L
Sbjct: 592 NDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVL 651

Query: 482 QIMKAFGVHPQK-------STFLLLAEARRATGLTKEAKR 514
            +++  G+ P         S F   A+  +A GL  E  +
Sbjct: 652 SVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAK 691



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/486 (26%), Positives = 214/486 (44%), Gaps = 59/486 (12%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L  SL   G   +A  + + +I     P LV               +S+H  +S  
Sbjct: 122 AFAHLAVSLCAAGLYPQANGLLDQMIRAYPTPPLV--------------LSSVHRALSGS 167

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++ G  P  +  + +++ + ++G + +  +    MK+ GL P+    N L+K    A   
Sbjct: 168 DQ-GRRP--VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADAL 224

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +   K+   M   G + P++ TY+ L+ A+C  +++  A  V+ +M  +G   +VVTYNT
Sbjct: 225 DLLWKVRGFMEGAG-ISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNT 283

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G  ++A     EME  G+ P+G T G II+G CK G+  +A      M   G
Sbjct: 284 LIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAG 343

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMD 370
           + PN+V+++ LI GF   M +   DE   ++KE     V P+ ITY  ++      G M 
Sbjct: 344 LMPNVVVYSTLIDGF---MRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMG 400

Query: 371 KCKEIF-----------------------------------DDMGKAGIKPDAHAYSILA 395
           +   I                                    ++M K GI P+ + YSI+ 
Sbjct: 401 RASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIII 460

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G  +  E E+A  LL  MI  G  PN  ++  +ISG+C +GS   A E   KM    ++
Sbjct: 461 NGLCQIGESERASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLT 520

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P+L  + +L+ G S   +   A E    M   G  P   T+  L       G  ++A+++
Sbjct: 521 PDLYCYNSLIIGLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQL 580

Query: 516 LSKIKN 521
           L ++ N
Sbjct: 581 LHQMLN 586



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 172/368 (46%), Gaps = 18/368 (4%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G  ++A+ + + ++  G  P+   Y  +L           + S +  + E G+ PD+  +
Sbjct: 572 GNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLY 631

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             VI+  S SG+M+ A+     ++++GL P +  Y +LI G+  A   E++V LLD M++
Sbjct: 632 GIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAK 691

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G ++P +  YN L+  +C   +I+ A N+ + +   G+ P+ VTY T+   Y + G+  
Sbjct: 692 KG-IEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIR 750

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A ++  EM   GV P+     ++ +G    G +++AL     M   G +  +  FN L+
Sbjct: 751 DAIDLYNEMLTEGVAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARG-YAIISSFNTLV 809

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF +        + L +M +  + P ++T   I+     AG + +   IF ++ +   K
Sbjct: 810 HGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQ---K 866

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
             +H            ++ +    L   MI  G  P  VI   I S  C  G +D+A+ +
Sbjct: 867 NASH------------RDTDHLSSLFTDMINQGLVPLDVIHNMIQS-HCKQGYLDKALML 913

Query: 446 FDKMCEHG 453
            D +   G
Sbjct: 914 HDALVAKG 921



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 49/233 (21%), Positives = 97/233 (41%), Gaps = 35/233 (15%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++L   G  Q A ++ + + + G  P  + Y +L++             ++ ++ + G
Sbjct: 634 VIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKG 693

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++P    +NA+I+ F +S ++  A + F  +   GL P   TY TLI GY  AG   +++
Sbjct: 694 IEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAI 753

Query: 198 KLLDLMSREGNVKPN----------------------------------LRTYNVLVRAW 223
            L + M  EG V P+                                  + ++N LV  +
Sbjct: 754 DLYNEMLTEG-VAPDAFVYSVLAAGCSNSGDLQQALFITEEMIARGYAIISSFNTLVHGF 812

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           C    + E    +H M    + P ++T   I     + G+  +A  + VE++ 
Sbjct: 813 CKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGLGEAGKLSEAHTIFVELQQ 865


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 225/452 (49%), Gaps = 12/452 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++  L +RG+  +A A+ +++++ G +PS+VTYT LL A+     F    +++ ++
Sbjct: 143 TYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEM 202

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P+ + +N +IN     G +++A +   ++   G  P   +Y T++KG   A + 
Sbjct: 203 RAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGL-CAARR 261

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            + VK+L     +    PN  T+++LVR +C    +  A  V+ +M+  G  P+    N 
Sbjct: 262 WDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNI 321

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A  + G  D A + +  M   G  P+  +   ++ G C+ G+ + A      M    
Sbjct: 322 VINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKN 381

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDE----VLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
             PN V FN     F+ I+ + G+ E    ++ LM E+  +  ++TY+ +++ +   G +
Sbjct: 382 CPPNEVTFN----TFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRV 437

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D   E+F+++     +P+   Y+ L  G    +  + A ELL  MI+     N V F  +
Sbjct: 438 DSALELFNNL---PCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVL 494

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           +S +C  G ++ A+E+ ++M EHG +PNL TF TL+ G ++      A E+L  + + GV
Sbjct: 495 VSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGV 554

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
                T+  + +       T+EA ++L  +++
Sbjct: 555 SLDTITYSSVVDVLSREDRTEEAIQMLHAVQD 586



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/495 (23%), Positives = 226/495 (45%), Gaps = 40/495 (8%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C+ +V + T L+ ++ +     EA  + + +   G  P++VTY  ++  +  + R
Sbjct: 167 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 226

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    I++++   G  PD + +  V+     +   ++    F +M +    P   T++ 
Sbjct: 227 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDM 286

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L++ +   G  E ++++L  MS+ G   PN    N+++ A C +  + +A++ ++ M   
Sbjct: 287 LVRFFCRGGMVERAIQVLQQMSQHG-CTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 345

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  PD ++Y T+     + G  + A+E++ EM      PN  T    I   C++G I++A
Sbjct: 346 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQA 405

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           ++    M EYG    +V +N L+ GF  +  R  VD  L L       P+ ITY+T++  
Sbjct: 406 IKLIELMPEYGCSVGIVTYNALVHGFC-VQGR--VDSALELFNNLPCEPNTITYTTLLTG 462

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              A  +D   E+   M +     +A  +++L   + ++   E+A EL+  M+E G  PN
Sbjct: 463 LCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPN 522

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS--------------------------- 455
           ++ F T++ G   D + + A+E+   +   GVS                           
Sbjct: 523 LITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLH 582

Query: 456 --------PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
                   P +  +  +++   +  +  +A +    M + G  P +ST+++L E     G
Sbjct: 583 AVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEG 642

Query: 508 LTKEAKRILSKIKNK 522
           L KEA+ +LS++  K
Sbjct: 643 LLKEARYVLSELYAK 657



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 198/452 (43%), Gaps = 49/452 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH---------- 127
           ++N +   G+  +A+ I N L   G +P +V+YTT+L  L   +R++ +           
Sbjct: 217 IINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK 276

Query: 128 -------------------------SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
                                     ++ Q+ ++G  P++   N VINA  + G +++A 
Sbjct: 277 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY 336

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
           D    M   G  P T +Y T+++G   AG+ E + +LL  M R+ N  PN  T+N  +  
Sbjct: 337 DFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRK-NCPPNEVTFNTFICI 395

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C +  I +A  ++  M   G    +VTYN +   +   G  D A E+   +     +PN
Sbjct: 396 LCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPN 452

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI-----KGFVEIMDRDGV 337
             T   +++G C   ++  A      M +     N V FN+L+     KGFVE       
Sbjct: 453 TITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVSFFCQKGFVE-----EA 507

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E++  M E    P++IT++T+++  +     ++  E+   +   G+  D   YS +   
Sbjct: 508 MELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDV 567

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             RE   E+A ++L  + + G  P V ++  I+   C     D+AI+ F  M  +G  PN
Sbjct: 568 LSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPN 627

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             T+  L+ G +       A  +L  + A GV
Sbjct: 628 ESTYIILIEGLAHEGLLKEARYVLSELYAKGV 659



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 170/398 (42%), Gaps = 42/398 (10%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  PD      +I      G   +A       + SG       YNTL+ GY   G+ + +
Sbjct: 69  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAA 128

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            +L+  M     V P+  TY  ++R  C+   + +A  ++  M   G +P VVTY  +  
Sbjct: 129 RRLIASMP----VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLE 184

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A  ++    +A  V+ EM   G  PN  T  +II+G C+EG++ +A      +  YG  P
Sbjct: 185 AVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQP 244

Query: 317 NLVIFNLLIKG-------------FVEIMDRDGVD----------------------EVL 341
           ++V +  ++KG             F E++D+  V                       +VL
Sbjct: 245 DIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVL 304

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M +    P+    + ++NA    G +D   +  ++MG  G  PD  +Y+ + +G  R 
Sbjct: 305 QQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRA 364

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
              E A+ELL  M+     PN V F T I   C  G +++AI++ + M E+G S  + T+
Sbjct: 365 GRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTY 424

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             L+ G+       R +  L++       P   T+  L
Sbjct: 425 NALVHGFC---VQGRVDSALELFNNLPCEPNTITYTTL 459



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 68/140 (48%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L++ + +    +EA  + + L+  G     +TY++++  L+ + R      ++  V
Sbjct: 525 TFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAV 584

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++ GM P    +N ++ A  +    ++A+D F  M  +G  P  STY  LI+G    G  
Sbjct: 585 QDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLL 644

Query: 194 EESVKLLDLMSREGNVKPNL 213
           +E+  +L  +  +G +  +L
Sbjct: 645 KEARYVLSELYAKGVLSKSL 664


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 218/450 (48%), Gaps = 7/450 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   L+  L   GK  E   +F+ +I  G +P++VTY TL+  L      ++   ++ 
Sbjct: 129 IATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLR 188

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +E+    PD + + ++I++  +   + +A + F +M   G++P+  TYN+LI       
Sbjct: 189 SMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLC 248

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +    LL+ M     + PN+  ++ +V A C E  + EA +V+  M   G++P+VVTY
Sbjct: 249 EWKHVTALLNEMVNS-KIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTY 307

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   +    E D+A +V   M   G  P+  +   +I+GYCK  +I++A+     M  
Sbjct: 308 NALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCR 367

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGF 368
             + PN V ++ L+ G   +     + + +AL  E       PD ++Y  +++       
Sbjct: 368 KELIPNTVTYSTLMHGLCHV---GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRR 424

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D+   +   +  + + PD   Y+I+  G  R  E E A +L   +   G HPNV  +T 
Sbjct: 425 LDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTI 484

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I+G C  G +  A ++F +M   G SPN  T+  +  G+    +  R  ++LQ M A G
Sbjct: 485 MINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG 544

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSK 518
                ST  +L E     GL +  K+ILS+
Sbjct: 545 FSADVSTSTVLVEMLSDDGLDQSVKQILSE 574



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 208/433 (48%), Gaps = 1/433 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A + FN ++     PS+  +T LL ++T  K ++++ S+  Q++  G+ P+    N +I
Sbjct: 42  DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 101

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N+F     +  A     K+ + G  P  +T+NTLI+G  + GK  E + L D M  EG  
Sbjct: 102 NSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG-F 160

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +PN+ TY  L+   C   + + A  ++  M     +PDVV Y +I  +  ++ +  QA  
Sbjct: 161 QPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFN 220

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  EM H G+ P+  T   +I   C   + K        M    + PN+VIF+ ++    
Sbjct: 221 LFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALC 280

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +        +V+ +M +  V P+V+TY+ +M+       MD+  ++FD M   G  PD  
Sbjct: 281 KEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVV 340

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           +YS L  GY + Q  EKA  L   M      PN V ++T++ G C  G +  AI +F +M
Sbjct: 341 SYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEM 400

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G  P+  ++  L+    + R+   A  +L+ ++   + P    + ++ +     G  
Sbjct: 401 VTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGEL 460

Query: 510 KEAKRILSKIKNK 522
           + A+ + S + +K
Sbjct: 461 EAARDLFSNLSSK 473



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 212/452 (46%), Gaps = 1/452 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++   TKL+ S+ +        ++ + +   G  P++ T   L+ +    +R     S++
Sbjct: 58  SIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVL 117

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++ + G  P+   FN +I      G + E +  F KM   G  P   TY TLI G    
Sbjct: 118 AKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKV 177

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    +++LL  M  +GN +P++  Y  ++ + C ++ +T+A+N+  +M   G+ P + T
Sbjct: 178 GSTSAAIRLLRSM-EQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 236

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++  A     E      ++ EM ++ + PN      ++   CKEGK+ EA      M 
Sbjct: 237 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 296

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + GV PN+V +N L+ G     + D   +V   M      PDV++YST++N +     ++
Sbjct: 297 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 356

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +F++M +  + P+   YS L  G       + A  L   M+  G  P+ V +  ++
Sbjct: 357 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 416

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C +  +D AI +   +    + P+++ +  ++ G   A +   A ++   + + G+H
Sbjct: 417 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLH 476

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+ ++       GL  EA ++  ++K K
Sbjct: 477 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRK 508



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 1/208 (0%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           KE      + + LM+ L   G+ Q+A A+F+ ++  G  P  V+Y  LL  L   +R + 
Sbjct: 368 KELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDE 427

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
             +++  +E + MDPD   +  VI+    +G +E A D F  +   GL P   TY  +I 
Sbjct: 428 AIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMIN 487

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G    G   E+ KL   M R+G   PN  TYN++ R +           ++ +M A G  
Sbjct: 488 GLCQQGLLAEASKLFGEMKRKG-YSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFS 546

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVE 273
            DV T   +    + +G     ++++ E
Sbjct: 547 ADVSTSTVLVEMLSDDGLDQSVKQILSE 574



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 127/307 (41%), Gaps = 35/307 (11%)

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
           N   + +A +  ++M      P +  +  +  +  +         +  +M+  G+ PN  
Sbjct: 36  NFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIY 95

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------VEIMDR- 334
           T  I+I+ +C   ++  A      + + G  PN+  FN LI+G          + + D+ 
Sbjct: 96  TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 155

Query: 335 ----------------DGVDEV---------LALMKEFRVNPDVITYSTIMNAWSTAGFM 369
                           +G+ +V         L  M++    PDV+ Y++I+++      +
Sbjct: 156 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 215

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +   +F +M   GI P    Y+ L        E +    LL  M+ S   PNVVIF+T+
Sbjct: 216 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 275

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           +   C +G +  A +V D M + GV PN+ T+  LM G+    +   A ++   M   G 
Sbjct: 276 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 335

Query: 490 HPQKSTF 496
            P   ++
Sbjct: 336 APDVVSY 342


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 217/445 (48%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L++ G  +    ++N +++      + TYT L+ AL           ++ +++E G
Sbjct: 199 LLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKG 258

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++P+   ++ VI    + G+++EA++    M E GL P T TY  +  G   A +  E+ 
Sbjct: 259 LNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAK 318

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
              + M + G +KP+    + L+  +  E +I E   +   M + G+  +++TYN +   
Sbjct: 319 LTFEEMQKTG-LKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHG 377

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+ ++A E++  M   G +PN RT  ++I GYC+E  +  AL     M++  + P+
Sbjct: 378 LCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPS 437

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +  +I G     D    +++L  M    + P+V+ YS ++ A+++ G +++ + + D
Sbjct: 438 AVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLD 497

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M  +G+ PD   Y+ +     +  + E+A   L+ +   G  P+ V F   I G+   G
Sbjct: 498 GMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTG 557

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M  A + FD+M +HG+ PN   +  L+ G+ +A     A  I + + A GV P   T  
Sbjct: 558 KMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCS 617

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
                    G  +EA ++ S++K K
Sbjct: 618 AFIHGLLKNGRVQEALKVFSELKEK 642



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 216/464 (46%), Gaps = 35/464 (7%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++N L        A  +   +   G KP++V Y+ L+ A   + R      ++  +
Sbjct: 440 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGM 499

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G+ PD   +NA+I+  S++G MEEA     +++  GL P   T+   I GY   GK 
Sbjct: 500 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 559

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+ K  D M   G + PN   Y VL+       N+ EA ++  ++ A G+ PDV T + 
Sbjct: 560 TEAAKYFDEMLDHG-LMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSA 618

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
                 +NG   +A +V  E++  G+ P+  T   +ISG+CK+G++++A      M   G
Sbjct: 619 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 678

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + PN+ I+N L+ G  +  D     ++   M E  + PD +TYST+++ +  +  + +  
Sbjct: 679 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 738

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF-------------- 419
            +F +M   G++P +  Y+ L  G  +E + EKA  L   M++ GF              
Sbjct: 739 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYC 798

Query: 420 --------------------HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
                                P+ V +TT+I   C  G M+ A  +F +M E  +  +  
Sbjct: 799 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 858

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           T+ +LM+GY++  Q      + + M A GV P + T+ L+  A 
Sbjct: 859 TYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAH 902



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 205/436 (47%), Gaps = 2/436 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  EA   F+ +++ G  P+   YT L+             SI  ++   G+ PD    
Sbjct: 557 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTC 616

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           +A I+   ++G ++EA+  F ++KE GL P   TY++LI G+   G+ E++ +L D M  
Sbjct: 617 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 676

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G + PN+  YN LV   C   +I  A  +   M   G++PD VTY+T+   Y ++    
Sbjct: 677 KG-IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVA 735

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  +  EM   GVQP+      ++ G CKEG +++A+   R M + G    L  FN LI
Sbjct: 736 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLI 794

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G+ +        ++   M   ++ PD +TY+T+++    AG M++   +F +M +  + 
Sbjct: 795 DGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI 854

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
            D   Y+ L  GY +  +  +   L   M+  G  P+ V +  +I   C + ++  A ++
Sbjct: 855 VDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 914

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
            D++   G+       + L+    +      A ++L  M   G+ P  +    L  +   
Sbjct: 915 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHE 974

Query: 506 TGLTKEAKRILSKIKN 521
            G   EA R+   +K+
Sbjct: 975 AGKMDEATRVFEGVKS 990



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 215/444 (48%), Gaps = 2/444 (0%)

Query: 76   TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
            T L+N   + G   EA +IF  L   G  P + T +  +  L    R      + S+++E
Sbjct: 582  TVLINGHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 641

Query: 136  NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             G+ PD   ++++I+ F + G +E+A +   +M   G+ P    YN L+ G   +G  + 
Sbjct: 642  KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 701

Query: 196  SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
            + KL D M  +G ++P+  TY+ ++  +C  +N+ EA+++ H+M + G++P    YN + 
Sbjct: 702  ARKLFDGMPEKG-LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 760

Query: 256  TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
                + G+ ++A  +  EM   G      +   +I GYCK  KI+EA +  + M    + 
Sbjct: 761  HGCCKEGDMEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 819

Query: 316  PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            P+ V +  +I    +    +  + +   M+E  +  D +TY+++M  ++  G   +   +
Sbjct: 820  PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 879

Query: 376  FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            F+ M   G+KPD   Y ++   + +E    +A +L   ++  G      I   +I+  C 
Sbjct: 880  FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 939

Query: 436  DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
               +  A ++ D+M E G+ P+L    TL+  + EA +   A  + + +K+ G+ P  +T
Sbjct: 940  REDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 999

Query: 496  FLLLAEARRATGLTKEAKRILSKI 519
             + L         +++A+ ++ ++
Sbjct: 1000 LIDLVNGNLNDTDSEDARNLIKQL 1023



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/530 (23%), Positives = 219/530 (41%), Gaps = 106/530 (20%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+ +L + G  + A+ +   + E G  P+   Y+ ++  +      +    +  
Sbjct: 228 VYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKR 287

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS------------- 178
            + E G+ P++  +  +      +  M EA  TF +M+++GL P  +             
Sbjct: 288 SMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREG 347

Query: 179 ----------------------TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
                                 TYN LI G    GK E++ ++L  M   G  KPN RT+
Sbjct: 348 DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLG-CKPNSRTF 406

Query: 217 NVLVRAWCNEKNITEAW-----------------------------------NVMHKMAA 241
            +L+  +C E N+  A                                     ++ KM  
Sbjct: 407 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 466

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEV------------------------------- 270
           SG+KP+VV Y+ +  AYA  G  ++A  +                               
Sbjct: 467 SGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEE 526

Query: 271 ----IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
               ++E++  G++P+  T G  I GY K GK+ EA ++   M ++G+ PN  ++ +LI 
Sbjct: 527 ASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 586

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           G  +  +      +   +    V PDV T S  ++     G + +  ++F ++ + G+ P
Sbjct: 587 GHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 646

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   YS L  G+ ++ E EKA EL   M   G  PN+ I+  ++ G C  G + RA ++F
Sbjct: 647 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 706

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           D M E G+ P+  T+ T++ GY ++     A  +   M + GV P    +
Sbjct: 707 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY 756



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 179/380 (47%), Gaps = 1/380 (0%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           + F+ +I+++   G ++EA + F+  K   +  +    N+L+K     G  E   K+ + 
Sbjct: 159 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNG 218

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           M  +  +  ++ TY  LV A C   ++  A  V+ +M   G+ P+   Y+ +     Q G
Sbjct: 219 M-LDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVG 277

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
           + D+A E+   M   G+ PN  T  II +G C+  ++ EA      M++ G+ P+    +
Sbjct: 278 DIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACS 337

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            LI GF+   D D V  +  +M    +  ++ITY+ +++     G M+K  EI   M   
Sbjct: 338 ALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTL 397

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G KP++  + +L +GY RE    +A ELL  M +    P+ V +  +I+G C    +  A
Sbjct: 398 GCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLA 457

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            ++ +KM   G+ PN+  +  L+  Y+   +   A  +L  M   GV P    +  +   
Sbjct: 458 NKLLEKMTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISC 517

Query: 503 RRATGLTKEAKRILSKIKNK 522
               G  +EA   L +I+ +
Sbjct: 518 LSKAGKMEEASTYLLEIQGR 537



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/338 (26%), Positives = 168/338 (49%), Gaps = 2/338 (0%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L++ L + G  Q A+ +F+ + E G +P  VTY+T++      +      S+  ++   G
Sbjct: 689  LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 748

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            + P S  +NA+++   + G+ME+AM+ F +M + G   TT ++NTLI GY  + K +E+ 
Sbjct: 749  VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEAS 807

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L   M  +  + P+  TY  ++   C    + EA  +  +M    +  D VTY ++   
Sbjct: 808  QLFQEMIAK-QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYG 866

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            Y + G++ +   +  +M   GV+P+  T G++I  +CKE  + EA +    +   G+   
Sbjct: 867  YNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTK 926

Query: 318  LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              I +LLI    +  D     ++L  M E  + P +   +T++ ++  AG MD+   +F+
Sbjct: 927  GTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFE 986

Query: 378  DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
             +   G+ PD      L  G + + + E A  L+  ++
Sbjct: 987  GVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 1024



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 113/257 (43%), Gaps = 36/257 (14%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            T  S   L++   +  K QEA  +F  +I     P  VTYTT                  
Sbjct: 786  TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT------------------ 827

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
                             VI+   ++G MEEA   F +M+E  L   T TY +L+ GY   
Sbjct: 828  -----------------VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKL 870

Query: 191  GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            G+  E   L + M  +G VKP+  TY +++ A C E N+ EA+ +  ++   GM      
Sbjct: 871  GQSSEVFALFEKMVAKG-VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI 929

Query: 251  YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            ++ + TA  +  +  +A +++ EM   G++P+   C  ++  + + GK+ EA R    +K
Sbjct: 930  HDLLITALCKREDLTEASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVK 989

Query: 311  EYGVHPNLVIFNLLIKG 327
              G+ P+      L+ G
Sbjct: 990  SLGLVPDTTTLIDLVNG 1006


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 218/450 (48%), Gaps = 7/450 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   L+  L   GK  E   +F+ +I  G +P++VTY TL+  L      ++   ++ 
Sbjct: 138 IATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLR 197

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +E+    PD + + ++I++  +   + +A + F +M   G++P+  TYN+LI       
Sbjct: 198 SMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLC 257

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +    LL+ M     + PN+  ++ +V A C E  + EA +V+  M   G++P+VVTY
Sbjct: 258 EWKHVTALLNEMVNS-KIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTY 316

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   +    E D+A +V   M   G  P+  +   +I+GYCK  +I++A+     M  
Sbjct: 317 NALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMCR 376

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGF 368
             + PN V ++ L+ G   +     + + +AL  E       PD ++Y  +++       
Sbjct: 377 KELIPNTVTYSTLMHGLCHV---GRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRR 433

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D+   +   +  + + PD   Y+I+  G  R  E E A +L   +   G HPNV  +T 
Sbjct: 434 LDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTI 493

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I+G C  G +  A ++F +M   G SPN  T+  +  G+    +  R  ++LQ M A G
Sbjct: 494 MINGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARG 553

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSK 518
                ST  +L E     GL +  K+ILS+
Sbjct: 554 FSADVSTSTVLVEMLSDDGLDQSVKQILSE 583



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/433 (26%), Positives = 208/433 (48%), Gaps = 1/433 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A + FN ++     PS+  +T LL ++T  K ++++ S+  Q++  G+ P+    N +I
Sbjct: 51  DALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILI 110

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N+F     +  A     K+ + G  P  +T+NTLI+G  + GK  E + L D M  EG  
Sbjct: 111 NSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEG-F 169

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +PN+ TY  L+   C   + + A  ++  M     +PDVV Y +I  +  ++ +  QA  
Sbjct: 170 QPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFN 229

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  EM H G+ P+  T   +I   C   + K        M    + PN+VIF+ ++    
Sbjct: 230 LFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALC 289

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +        +V+ +M +  V P+V+TY+ +M+       MD+  ++FD M   G  PD  
Sbjct: 290 KEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVV 349

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           +YS L  GY + Q  EKA  L   M      PN V ++T++ G C  G +  AI +F +M
Sbjct: 350 SYSTLINGYCKIQRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEM 409

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G  P+  ++  L+    + R+   A  +L+ ++   + P    + ++ +     G  
Sbjct: 410 VTRGQIPDFVSYCILLDYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGEL 469

Query: 510 KEAKRILSKIKNK 522
           + A+ + S + +K
Sbjct: 470 EAARDLFSNLSSK 482



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 212/452 (46%), Gaps = 1/452 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++   TKL+ S+ +        ++ + +   G  P++ T   L+ +    +R     S++
Sbjct: 67  SIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVL 126

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++ + G  P+   FN +I      G + E +  F KM   G  P   TY TLI G    
Sbjct: 127 AKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKV 186

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    +++LL  M  +GN +P++  Y  ++ + C ++ +T+A+N+  +M   G+ P + T
Sbjct: 187 GSTSAAIRLLRSM-EQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFT 245

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++  A     E      ++ EM ++ + PN      ++   CKEGK+ EA      M 
Sbjct: 246 YNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMI 305

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + GV PN+V +N L+ G     + D   +V   M      PDV++YST++N +     ++
Sbjct: 306 KRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIE 365

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +F++M +  + P+   YS L  G       + A  L   M+  G  P+ V +  ++
Sbjct: 366 KAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILL 425

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C +  +D AI +   +    + P+++ +  ++ G   A +   A ++   + + G+H
Sbjct: 426 DYLCKNRRLDEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLH 485

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+ ++       GL  EA ++  ++K K
Sbjct: 486 PNVWTYTIMINGLCQQGLLAEASKLFGEMKRK 517



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 1/208 (0%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           KE      + + LM+ L   G+ Q+A A+F+ ++  G  P  V+Y  LL  L   +R + 
Sbjct: 377 KELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLDE 436

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
             +++  +E + MDPD   +  VI+    +G +E A D F  +   GL P   TY  +I 
Sbjct: 437 AIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMIN 496

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G    G   E+ KL   M R+G   PN  TYN++ R +           ++ +M A G  
Sbjct: 497 GLCQQGLLAEASKLFGEMKRKG-YSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFS 555

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVE 273
            DV T   +    + +G     ++++ E
Sbjct: 556 ADVSTSTVLVEMLSDDGLDQSVKQILSE 583



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 68/307 (22%), Positives = 127/307 (41%), Gaps = 35/307 (11%)

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
           N   + +A +  ++M      P +  +  +  +  +         +  +M+  G+ PN  
Sbjct: 45  NFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIY 104

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------VEIMDR- 334
           T  I+I+ +C   ++  A      + + G  PN+  FN LI+G          + + D+ 
Sbjct: 105 TLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKM 164

Query: 335 ----------------DGVDEV---------LALMKEFRVNPDVITYSTIMNAWSTAGFM 369
                           +G+ +V         L  M++    PDV+ Y++I+++      +
Sbjct: 165 IGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQV 224

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +   +F +M   GI P    Y+ L        E +    LL  M+ S   PNVVIF+T+
Sbjct: 225 TQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTV 284

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           +   C +G +  A +V D M + GV PN+ T+  LM G+    +   A ++   M   G 
Sbjct: 285 VDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGF 344

Query: 490 HPQKSTF 496
            P   ++
Sbjct: 345 APDVVSY 351


>gi|356518050|ref|XP_003527697.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 232/463 (50%), Gaps = 13/463 (2%)

Query: 46  YSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKP 105
           Y +S  TD Q  T     +++       +   LM  LI      +A  IFN L     K 
Sbjct: 99  YVHSHSTD-QALTFLHHMIHEGHVPLSNTFNNLMCLLIRSNYFDKAWWIFNEL-----KS 152

Query: 106 SLV----TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
            +V    ++  ++        F     +++ +EE G+ P+ + +  +I+   + GN+  A
Sbjct: 153 KVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKYGNVMLA 212

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
            + F KM   GL P   TY+ L+ G+   G   E  ++ + M R G V PN   YN L+ 
Sbjct: 213 KNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIV-PNAYAYNCLIS 271

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
            +CN   + +A+ V  +M   G+   V+TYN +     +  +  +A +++ ++   G+ P
Sbjct: 272 EYCNGGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSP 331

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N  T  I+I+G+C  GK+  A+R    +K  G+ P LV +N LI G+ ++ +  G  +++
Sbjct: 332 NIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLV 391

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M+E  + P  +TY+ +++A++   + +K  E+   M K+G+ PD + YS+L  G    
Sbjct: 392 KEMEERCIAPSKVTYTILIDAFARLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVH 451

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
              ++A +L  ++ E    PN VI+ T+I G+C +GS  RA+ + ++M   G+ PN+ +F
Sbjct: 452 GNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASF 511

Query: 462 ETLMWGYSEARQPWR-AEEILQIMKAFGVHPQKSTFLLLAEAR 503
            + + G     + W+ AE +L  M   G+ P  S + ++ + +
Sbjct: 512 CSTI-GLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVK 553



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 101/446 (22%), Positives = 201/446 (45%), Gaps = 62/446 (13%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
            T  S++ ++N L+  G   +AQ++   LI G   PS                     S+
Sbjct: 36  HTSHSISFILNHLLSSGMLPQAQSLILRLISG-RIPS---------------------SL 73

Query: 130 MSQVEENGMDPDSIF---FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
           M Q+ +    P   +   ++ ++NA+  S + ++A+     M   G  P ++T+N L+  
Sbjct: 74  MLQLTQAHFTPCLTYTPLYDTIVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLMCL 133

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
              +   +++  + +    +  V  +  ++ ++++  C      + + ++  +   G+ P
Sbjct: 134 LIRSNYFDKAWWIFN--ELKSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSP 191

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           +VV Y T+     + G    A+ +  +M+  G+ PN  T  ++++G+ K+G  +E  +  
Sbjct: 192 NVVIYTTLIDGCCKYGNVMLAKNLFCKMDRLGLVPNPHTYSVLMNGFFKQGLQREGFQMY 251

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             MK  G+ PN   +N LI    E  +   VD      K F+V                 
Sbjct: 252 ENMKRSGIVPNAYAYNCLIS---EYCNGGMVD------KAFKV----------------- 285

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
                    F +M + GI      Y+IL  G  R ++  +A +L+  + + G  PN+V +
Sbjct: 286 ---------FAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTY 336

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
             +I+G+C  G MD A+ +F+++   G+SP L T+ TL+ GYS+      A ++++ M+ 
Sbjct: 337 NILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEE 396

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEA 512
             + P K T+ +L +A      T++A
Sbjct: 397 RCIAPSKVTYTILIDAFARLNYTEKA 422



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/284 (31%), Positives = 133/284 (46%), Gaps = 21/284 (7%)

Query: 41  EKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIE 100
           E  Q+Y N K +   P  +   C+  E C                G   +A  +F  + E
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNG--------------GMVDKAFKVFAEMRE 291

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
            G    ++TY  L+  L   K+F     ++ +V + G+ P+ + +N +IN F + G M+ 
Sbjct: 292 KGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVGKMDT 351

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS--REGNVKPNLRTYNV 218
           A+  F ++K SGL+PT  TYNTLI GY    K E     LDL+    E  + P+  TY +
Sbjct: 352 AVRLFNQLKSSGLSPTLVTYNTLIAGY---SKVENLAGALDLVKEMEERCIAPSKVTYTI 408

Query: 219 LVRAWCNEKNITEAWNVMHK-MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           L+ A+    N TE    MH  M  SG+ PDV TY+ +      +G   +A ++   +   
Sbjct: 409 LIDAFA-RLNYTEKACEMHSLMEKSGLVPDVYTYSVLIHGLCVHGNMKEASKLFKSLGEM 467

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
            +QPN      +I GYCKEG    ALR    M   G+ PN+  F
Sbjct: 468 HLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASF 511



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 53/117 (45%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L   G  +EA  +F +L E   +P+ V Y T++     +        +++
Sbjct: 438 VYTYSVLIHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLN 497

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++  +GM P+   F + I         +EA     +M  SGL P+ S Y  + K  G
Sbjct: 498 EMVHSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKG 554


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/386 (30%), Positives = 204/386 (52%), Gaps = 9/386 (2%)

Query: 86  GKPQEAQAIFNNLIEG-GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
           GK ++A+  F   +EG G KP++V+Y T++   + +        I+  +   G++PDS  
Sbjct: 187 GKLKKARE-FIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           + ++I+   + G +EEA   F KM E GL P   TYNTLI GY   G  E +    D M 
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           ++G + P++ TYN+LV A   E  + EA +++ +M   G+ PD +TYN +   Y++ G A
Sbjct: 306 KKG-IMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNA 364

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A ++  EM   G++P   T   +I    +  ++KEA      + + GV P++++FN +
Sbjct: 365 KRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 424

Query: 325 IKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           I G         V+    L+KE     V PD +T++T+M      G +++ + + D+M  
Sbjct: 425 IDGHCA---NGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKX 481

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            GIKPD  +Y+ L  GY R  + + A  +   M+  GF+P ++ +  +I   C +   D 
Sbjct: 482 RGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDL 541

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWG 467
           A E+  +M   G+SP+  T+ +L+ G
Sbjct: 542 AEELLKEMVNKGISPDDSTYLSLIEG 567



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/366 (30%), Positives = 183/366 (50%), Gaps = 1/366 (0%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  P+ + +N +I+ +S  GN+E A      M+  G+ P + TY +LI G    G+ EE+
Sbjct: 203 GFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEA 262

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
             L D M   G V PN  TYN L+  +CN+ ++  A++   +M   G+ P V TYN +  
Sbjct: 263 SGLFDKMVEIGLV-PNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVH 321

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A    G   +A+++I EM   G+ P+  T  I+I+GY + G  K A      M   G+ P
Sbjct: 322 ALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEP 381

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
             V +  LI            D++   + +  V+PDVI ++ +++     G +++   + 
Sbjct: 382 THVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLL 441

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M +  + PD   ++ L +G  RE + E+A  LL  M   G  P+ + + T+ISG+   
Sbjct: 442 KEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRR 501

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +  A  V D+M   G +P L T+  L+    + ++   AEE+L+ M   G+ P  ST+
Sbjct: 502 GDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTY 561

Query: 497 LLLAEA 502
           L L E 
Sbjct: 562 LSLIEG 567



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 191/377 (50%), Gaps = 12/377 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   +++    RG  + A+ I + +   G +P   TY +L++ +  + R      +  
Sbjct: 208 VVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFD 267

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E G+ P+++ +N +I+ +   G++E A     +M + G+ P+ STYN L+    + G
Sbjct: 268 KMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEG 327

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  ++  M ++G + P+  TYN+L+  +    N   A+++ ++M + G++P  VTY
Sbjct: 328 RMGEADDMIKEMRKKG-IIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTY 386

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++    ++     +A+++  ++   GV P+      +I G+C  G ++ A    + M  
Sbjct: 387 TSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDR 446

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
             V P+ V FN L++G      R+G V+E   L+ E +   + PD I+Y+T+++ +   G
Sbjct: 447 KSVPPDEVTFNTLMQGRC----REGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRG 502

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +     + D+M   G  P    Y+ L K   + QE + AEELL  M+  G  P+   + 
Sbjct: 503 DIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYL 562

Query: 428 TIISGWCSDGSMDRAIE 444
           ++I G    G++D  +E
Sbjct: 563 SLIEGM---GNVDTLVE 576



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 94/297 (31%), Positives = 152/297 (51%)

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
           E  + +A   +  M   G KP+VV+YNTI   Y+  G  + A  ++  M   G++P+  T
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
            G +ISG CKEG+++EA      M E G+ PN V +N LI G+    D +        M 
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           +  + P V TY+ +++A    G M +  ++  +M K GI PDA  Y+IL  GY R    +
Sbjct: 306 KKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAK 365

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +A +L   M+  G  P  V +T++I        M  A ++F+K+ + GVSP++  F  ++
Sbjct: 366 RAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMI 425

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            G+       RA  +L+ M    V P + TF  L + R   G  +EA+ +L ++K +
Sbjct: 426 DGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXR 482



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 85/324 (26%), Positives = 163/324 (50%), Gaps = 1/324 (0%)

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
           + GK +++ + +  M   G  KPN+ +YN ++  + +  NI  A  ++  M   G++PD 
Sbjct: 185 LEGKLKKAREFIGFMEGLG-FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDS 243

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TY ++ +   + G  ++A  +  +M   G+ PN  T   +I GYC +G ++ A  +   
Sbjct: 244 YTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDE 303

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M + G+ P++  +NLL+            D+++  M++  + PD ITY+ ++N +S  G 
Sbjct: 304 MVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGN 363

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
             +  ++ ++M   GI+P    Y+ L     R    ++A++L   +++ G  P+V++F  
Sbjct: 364 AKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNA 423

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G C++G+++RA  +  +M    V P+  TF TLM G     +   A  +L  MK  G
Sbjct: 424 MIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRG 483

Query: 489 VHPQKSTFLLLAEARRATGLTKEA 512
           + P   ++  L       G  K+A
Sbjct: 484 IKPDHISYNTLISGYGRRGDIKDA 507


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/457 (26%), Positives = 222/457 (48%), Gaps = 5/457 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S   +MN L+E G   +A  ++  + +   +  + TYT  + +     R  +   ++
Sbjct: 189 SVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLL 248

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   G   +++ +  V+  F E G+ + A + F +M E  L P  +T+N L+      
Sbjct: 249 RNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKK 308

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   ES +L D + + G V PNL T+N+ ++  C E ++  A  ++  ++  G++PDVVT
Sbjct: 309 GFVLESERLFDKVLKRG-VCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVT 367

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+     +     +AEE + +M + G +PN  T   II GYCK+G + +A R  +   
Sbjct: 368 YNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAV 427

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL--ALMKEFRVNPDVITYSTIMNAWSTAGF 368
             G  P+   +  L+ GF +  D D    V    L K  R  P +I Y+T++      G 
Sbjct: 428 FKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLR--PSIIVYNTLIKGLCQQGL 485

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +    ++ ++M + G KPD   Y+++  G  +      A  L+   I  G  P++  + T
Sbjct: 486 ILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNT 545

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++ G+C    +D AIE+ ++M   G++P++ T+ TL+ G  +  +     EI + M   G
Sbjct: 546 LVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKG 605

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
             P   T+  + E+   +    EA  +L ++K+K  T
Sbjct: 606 CAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLT 642



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 212/449 (47%), Gaps = 2/449 (0%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C  V +  KL+++L ++G   E++ +F+ +++ G  P+L T+   +  L  +   +    
Sbjct: 292 CPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVR 351

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++  V   G+ PD + +N VI        + EA +   KM   G  P   TYN++I GY 
Sbjct: 352 LLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYC 411

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G   ++ ++L     +G  KP+  TY  LV  +C + +  +A  V       G++P +
Sbjct: 412 KKGMVVDANRILKDAVFKG-FKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSI 470

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           + YNT+     Q G    A +++ EM   G +P+  T  +II+G CK G + +A      
Sbjct: 471 IVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGD 530

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
               G  P++  +N L+ G+   +  D   E++  M    + PDVITY+T++N       
Sbjct: 531 AITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAK 590

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            ++  EIF  M + G  P+   Y+ + +     ++  +A +LL  M   G  P+VV F T
Sbjct: 591 SEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGT 650

Query: 429 IISGWCSDGSMDRAIEVFDKM-CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +I+G+C  G +D A  +F  M  ++ VS    T+  ++  +SE      A  +   MK  
Sbjct: 651 LITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKN 710

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           G  P   T+ +L +    TG   +  + L
Sbjct: 711 GCDPDNYTYRVLIDGFCKTGNVNQGYKFL 739



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 206/455 (45%), Gaps = 38/455 (8%)

Query: 63  CMNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           C+++E  R  V +   ++  L  + +  EA+   + ++ GG +P+  TY +++     + 
Sbjct: 355 CVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKG 414

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
                + I+      G  PD   + +++N F + G+ ++AM  F      GL P+   YN
Sbjct: 415 MVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYN 474

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREG---------------------------------- 207
           TLIKG    G    +++L++ M+ +G                                  
Sbjct: 475 TLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITK 534

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
              P++ TYN LV  +C +  +  A  ++++M + GM PDV+TYNT+     +  ++++ 
Sbjct: 535 GCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEV 594

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
            E+   M   G  PN  T   II   C   K+ EA+     MK  G+ P++V F  LI G
Sbjct: 595 MEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLITG 654

Query: 328 FVEIMDRDGVDEVLALM-KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           F ++ D DG   +   M K++ V+    TY+ I++A+S    M     +F +M K G  P
Sbjct: 655 FCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGCDP 714

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D + Y +L  G+ +     +  + L+  IE GF P++  F  +++  C +  +  A+ + 
Sbjct: 715 DNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTFGRVLNCLCVEHKVQEAVGII 774

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
             M +  + P+  T  T+     +    + A E L
Sbjct: 775 HLMVQKDIVPD--TVNTIFEADKKGHITYHAYEFL 807



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 196/419 (46%), Gaps = 8/419 (1%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV----INAFSESGN 157
           G K +L TY ++L  L    +FN + +++S++  N    D+     V    +  +   G 
Sbjct: 114 GFKHTLFTYKSMLQKLGFHGKFNEMENLLSEMRSN---LDNTLLEGVYVEAMRFYGRKGK 170

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           ++EA+DTF +M      P+  +YN ++      G   ++ K+   M ++  V+ ++ TY 
Sbjct: 171 IQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRM-KDKKVESDVYTYT 229

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           + ++++C       A  ++  M   G   + V Y T+ T + + G+ D+A E+  EM   
Sbjct: 230 IRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLEC 289

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
            + P+  T   ++   CK+G + E+ R    + + GV PNL  FN+ I+G  +    D  
Sbjct: 290 CLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRA 349

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
             +L  +    + PDV+TY+T++        + + +E    M   G +P+   Y+ +  G
Sbjct: 350 VRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDG 409

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           Y ++     A  +L   +  GF P+   + ++++G+C DG  D+A+ VF      G+ P+
Sbjct: 410 YCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPS 469

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +  + TL+ G  +      A +++  M   G  P   T+ L+       G   +A  ++
Sbjct: 470 IIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLI 528



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/338 (28%), Positives = 153/338 (45%), Gaps = 4/338 (1%)

Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR--TYNVLVRAWC 224
           K  + G   T  TY ++++  G  GK  E   LL  M    N+   L    Y   +R + 
Sbjct: 109 KKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENLLSEM--RSNLDNTLLEGVYVEAMRFYG 166

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
            +  I EA +   +M      P V +YN I     + G  +QA +V + M+   V+ +  
Sbjct: 167 RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVY 226

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T  I I  +C+ G+   ALR  R M   G   N V +  ++ GF E  D D   E+   M
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            E  + PDV T++ +++A    GF+ + + +FD + K G+ P+   ++I  +G  +E   
Sbjct: 287 LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           ++A  LL  +   G  P+VV + T+I G C    +  A E   KM   G  PN  T+ ++
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           + GY +      A  IL+     G  P + T+  L   
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNG 444



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 92/369 (24%), Positives = 152/369 (41%), Gaps = 55/369 (14%)

Query: 154 ESGNMEEAMDTFWKMK--ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP 211
           ESGN     D  W+ +  ES L   +S  N ++    IAG+ ++    L  +  EG    
Sbjct: 40  ESGN-----DEVWRARLMESELRTKSSFKNAIL----IAGEDDD----LGEVKMEGR--- 83

Query: 212 NLRTYNVLVRAWCNEKNITEAWNV-MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
             RT   LV  +C +       N+ + K    G K  + TY ++      +G+ ++ E +
Sbjct: 84  --RTDRDLVDVFCMKYEDVCIRNLQLIKKTKQGFKHTLFTYKSMLQKLGFHGKFNEMENL 141

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + EM  N            +     EG   EA+RF      YG           I+  V+
Sbjct: 142 LSEMRSN------------LDNTLLEGVYVEAMRF------YGRKGK-------IQEAVD 176

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
             +R         M  F  +P V +Y+ IMN     G+ ++  +++  M    ++ D + 
Sbjct: 177 TFER---------MDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYT 227

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+I  K + R   P  A  LL  M   G   N V + T+++G+   G  DRA E+FD+M 
Sbjct: 228 YTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEML 287

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E  + P++ TF  L+    +      +E +   +   GV P   TF +  +     G   
Sbjct: 288 ECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLD 347

Query: 511 EAKRILSKI 519
            A R+L  +
Sbjct: 348 RAVRLLGCV 356


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 212/448 (47%), Gaps = 7/448 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L   GK  EA  +F+ +I  G +P++VTY TL+  L      ++   ++  +
Sbjct: 142 TFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 201

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+    P+ + F+ +I++  +   + EA + F +M   G++P   TYN+LI G     + 
Sbjct: 202 EQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 261

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +    L++ M  +  + P++ T N +V A C E  + EA +V+  M   G++P+VVTYN 
Sbjct: 262 KHVTTLMNEMV-DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 320

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +    E D A +V   M H     N  +   +I+GYCK   + +A+     M    
Sbjct: 321 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 380

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMD 370
           + PN V +N LI G   +     + + ++L  E       PD++TY T+ +       +D
Sbjct: 381 LTPNTVTYNTLIHGLCHV---GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 437

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +   +  +   PD   Y+ +  G  R  E E A +L   +   G  PNV  +  +I
Sbjct: 438 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 497

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C  G +  A ++F +M ++G SPN  T+  +  G+    +  R  E+L+ M A G  
Sbjct: 498 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS 557

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSK 518
              ST  LL       GL +  K+IL K
Sbjct: 558 VDVSTTTLLVGMLSDDGLDQSVKQILCK 585



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 205/447 (45%), Gaps = 8/447 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++  ++NSL    +   A +    +++ GH+P   T+TTL+  L ++ +      +  
Sbjct: 105 VYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFD 164

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  P+ + +  +IN   + GN   A+     M++    P    ++TLI       
Sbjct: 165 KMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDR 224

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  +   M  +G + PN+ TYN L+   C          +M++M  S + PDV T 
Sbjct: 225 QVTEAFNIFSEMITKG-ISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTL 283

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+  A  + G   +A +V+  M H GV+PN  T   ++ G+C   ++  A++   TM  
Sbjct: 284 NTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVH 343

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
                N++ +N LI G+ +I   D    +   M    + P+ +TY+T+++     G +  
Sbjct: 344 KDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQD 403

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F +M   G  PD   Y  L+    + +  +KA  LL  +  S + P++ I+TTI+ 
Sbjct: 404 AISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILD 463

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G ++ A ++F  +   G+ PN+ T+  ++ G  +      A ++   M   G  P
Sbjct: 464 GMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSP 523

Query: 492 QKSTFLLLA-------EARRATGLTKE 511
              T+ L+        EA R   L +E
Sbjct: 524 NDCTYNLITRGFLRNNEALRTIELLEE 550



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 199/418 (47%), Gaps = 1/418 (0%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G  P + T   ++ +L    R +   S ++++ + G  PD+  F  +I      G + EA
Sbjct: 100 GIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEA 159

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           +  F KM   G  P   TY TLI G    G    +++LL  M  +GN +PN+  ++ L+ 
Sbjct: 160 LHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM-EQGNCQPNVVVFSTLID 218

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
           + C ++ +TEA+N+  +M   G+ P++VTYN++     +  E      ++ EM  + + P
Sbjct: 219 SLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMP 278

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T   ++   CKEG + EA      M   GV PN+V +N L+ G     + D   +V 
Sbjct: 279 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 338

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M       +VI+Y+T++N +     +DK   +F++M +  + P+   Y+ L  G    
Sbjct: 339 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 398

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
              + A  L   M+  G  P++V + T+    C +  +D+A+ +   +      P+++ +
Sbjct: 399 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIY 458

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            T++ G   A +   A ++   + + G+ P   T+ ++       GL  EA ++ S++
Sbjct: 459 TTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 516



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/433 (25%), Positives = 199/433 (45%), Gaps = 1/433 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           EA + FN ++     PS V +  LL ++   K  +++ S+  Q++  G+ PD      VI
Sbjct: 53  EALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVI 112

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N+      ++ A     K+ + G  P  +T+ TLI+G  + GK  E++ L D M  EG  
Sbjct: 113 NSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG-F 171

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +PN+ TY  L+   C   N + A  ++  M     +P+VV ++T+  +  ++ +  +A  
Sbjct: 172 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFN 231

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  EM   G+ PN  T   +I G CK  + K        M +  + P++   N ++    
Sbjct: 232 IFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALC 291

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +        +V+ +M    V P+V+TY+ +M+       +D   ++FD M       +  
Sbjct: 292 KEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVI 351

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           +Y+ L  GY + Q  +KA  L   M      PN V + T+I G C  G +  AI +F +M
Sbjct: 352 SYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEM 411

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G  P+L T+ TL     + R   +A  +L+ ++     P    +  + +     G  
Sbjct: 412 VARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGEL 471

Query: 510 KEAKRILSKIKNK 522
           ++A+ + S + +K
Sbjct: 472 EDARDLFSNLSSK 484



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 171/378 (45%), Gaps = 34/378 (8%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLI-------------------KGYGIAGKPEESVK 198
           ++EA+ TF +M      P+T  +N L+                     +GI         
Sbjct: 51  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 110

Query: 199 LLDLMSREGNV---------------KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           +++ +     V               +P+  T+  L+R  C E  I EA ++  KM   G
Sbjct: 111 VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 170

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
            +P+VVTY T+     + G    A  ++  ME    QPN      +I   CK+ ++ EA 
Sbjct: 171 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAF 230

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M   G+ PN+V +N LI G  ++ +   V  ++  M + ++ PDV T +T+++A 
Sbjct: 231 NIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDAL 290

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G + +  ++ D M   G++P+   Y+ L  G+    E + A ++  TM+      NV
Sbjct: 291 CKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANV 350

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           + + T+I+G+C   S+D+A+ +F++M    ++PN  T+ TL+ G     +   A  +   
Sbjct: 351 ISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHE 410

Query: 484 MKAFGVHPQKSTFLLLAE 501
           M A G  P   T+  L++
Sbjct: 411 MVARGQIPDLVTYRTLSD 428



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 69/321 (21%), Positives = 131/321 (40%), Gaps = 14/321 (4%)

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           ++NT  +        D+A      M H    P+      +++   K       L  +R M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
             +G+ P++    ++I     +   D     LA + +    PD  T++T++      G +
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +   +FD M   G +P+   Y  L  G  +      A  LL +M +    PNVV+F+T+
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I   C D  +  A  +F +M   G+SPN+ T+ +L+ G  +  +      ++  M    +
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNK------------ERTNEMEAEEDIPVE 537
            P   T   + +A    G+  EA  ++  + ++               + +  E D+ V+
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336

Query: 538 SLERLYHKE--ATTASYPNLL 556
             + + HK+  A   SY  L+
Sbjct: 337 VFDTMVHKDCVANVISYNTLI 357



 Score = 45.8 bits (107), Expect = 0.068,   Method: Compositional matrix adjust.
 Identities = 28/127 (22%), Positives = 60/127 (47%), Gaps = 1/127 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           ++  T +++ +   G+ ++A+ +F+NL   G +P++ TY  ++  L  Q        + S
Sbjct: 455 IQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFS 514

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +NG  P+   +N +   F  +      ++   +M   G +   ST  TL+ G     
Sbjct: 515 EMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVST-TTLLVGMLSDD 573

Query: 192 KPEESVK 198
             ++SVK
Sbjct: 574 GLDQSVK 580


>gi|357498963|ref|XP_003619770.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494785|gb|AES75988.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 582

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 227/435 (52%), Gaps = 1/435 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L+  L  +G   +A    + ++  G     V+Y TL+  L    R  +   ++ +V
Sbjct: 142 TFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRV 201

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +   + P+++ +N +I+   ++  + +A D + +M    ++P   T N+LI G+ I G+ 
Sbjct: 202 DGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFCIMGQL 261

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+V LL  M  E N+ P + T+++LV A+C E  + EA  ++       +  DVVTYN+
Sbjct: 262 KEAVGLLHKMILE-NINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDVVTYNS 320

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    E ++A+++   M   GV  N ++   +I+G CK   + EA+     M+   
Sbjct: 321 LMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEEMRCRK 380

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + PN+V +N LI G  ++     V +++  M +    P++ITY++I++A      +DK  
Sbjct: 381 IIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVDKAI 440

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +  ++   GI+PD + Y++L KG  +  + E A+++   ++  G++ +V  +T +I G+
Sbjct: 441 ALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMIQGF 500

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G  D A+ +  KM ++G  PN KT+E ++    E  +   AE++L+ M A G+  +K
Sbjct: 501 CVKGLFDAALALLSKMEDNGCIPNAKTYEIVILSLFEKDENDMAEKLLREMIARGLLDEK 560

Query: 494 STFLLLAEARRATGL 508
           S   L ++     G+
Sbjct: 561 SYIYLASKETGVMGM 575



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 192/434 (44%), Gaps = 47/434 (10%)

Query: 95  FNNLIEGGHK---PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINA 151
           FN+L+   HK   P ++ +  +L++L   K  ++  S+  Q+E NG+  D   FN +IN 
Sbjct: 57  FNSLLH--HKNPTPPIIQFNKILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINC 114

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP 211
           FS+ G    +   F K+ + G                                      P
Sbjct: 115 FSQLGLNSLSFSVFGKILKKGF------------------------------------DP 138

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           N  T+N L++  C + +I +A N   K+ A G   D V+Y T+     + G    A +++
Sbjct: 139 NAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLL 198

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
             ++   VQPN     +II   CK   + +A      M    + P+    N LI GF  I
Sbjct: 199 KRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGFC-I 257

Query: 332 MDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
           M +  + E + L+ +     +NP + T+S +++A+   G + + K +     K  I  D 
Sbjct: 258 MGQ--LKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKDIILDV 315

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y+ L  GY   +E  KA+++  +M   G   NV  +TT+I+G C    +D A+ +F++
Sbjct: 316 VTYNSLMDGYCLVKEINKAKDIFDSMASRGVIANVQSYTTMINGLCKIKMVDEAVNLFEE 375

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M    + PN+ T+ +L+ G  +  +     +++  M   G  P   T+  + +A      
Sbjct: 376 MRCRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHH 435

Query: 509 TKEAKRILSKIKNK 522
             +A  +L+ +K++
Sbjct: 436 VDKAIALLTNLKDQ 449



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/235 (23%), Positives = 101/235 (42%)

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           I+S   K      AL   + M+  G+  +   FN+LI  F ++        V   + +  
Sbjct: 76  ILSSLVKAKHHSTALSLHQQMELNGIVSDFFTFNILINCFSQLGLNSLSFSVFGKILKKG 135

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
            +P+ IT++T++      G + +     D +   G   D  +Y  L  G  +      A 
Sbjct: 136 FDPNAITFNTLIKGLCLKGHIHQALNFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAAL 195

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           +LL  +      PN V++  II   C    ++ A +++ +M    +SP+  T  +L++G+
Sbjct: 196 QLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRISPDDFTCNSLIYGF 255

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
               Q   A  +L  M    ++P+  TF +L +A    G  KEAK +L     K+
Sbjct: 256 CIMGQLKEAVGLLHKMILENINPRMYTFSILVDAFCKEGKVKEAKMMLGVTMKKD 310



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 42/180 (23%), Positives = 86/180 (47%), Gaps = 5/180 (2%)

Query: 69  CRTVRSMTKLMNSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           CR +       NSLI+     GK      + + + + G  P+++TY ++L AL      +
Sbjct: 378 CRKIIPNVVTYNSLIDGLGKLGKISCVLKLVDEMHDRGQPPNIITYNSILDALCKNHHVD 437

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
              ++++ +++ G+ PD   +  +I    +SG +E+A   F  +   G      TY  +I
Sbjct: 438 KAIALLTNLKDQGIRPDMYTYTVLIKGLCQSGKLEDAQKVFEDLLVKGYNLDVYTYTVMI 497

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           +G+ + G  + ++ LL  M   G + PN +TY +++ +   +     A  ++ +M A G+
Sbjct: 498 QGFCVKGLFDAALALLSKMEDNGCI-PNAKTYEIVILSLFEKDENDMAEKLLREMIARGL 556


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 214/445 (48%), Gaps = 9/445 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L   G+  EA+ +         +P ++ Y  ++A   +  + ++   +++ +    
Sbjct: 100 LIKKLCASGRTAEARRVL-----AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP--- 151

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M+PDS  +N +I      G    A+     M   G  P   TY  L++        ++++
Sbjct: 152 MEPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAM 211

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLLD M  +G   P++ TYNV+V   C E  + +A   +  + + G +P+ V+YN +   
Sbjct: 212 KLLDEMRAKG-CAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKG 270

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                  + AE+++ EM   G  PN  T  ++IS  C+ G ++ A+     + +YG  PN
Sbjct: 271 LCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPN 330

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +N ++  F +    D     + LM      PD+++Y+T++ A    G +D   E+  
Sbjct: 331 SLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLH 390

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +   G  P   +Y+ +  G  +  + ++A ELL  M+  G  P+++ ++TI SG C + 
Sbjct: 391 QLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCRED 450

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ AI  F K+ + G+ PN   +  ++ G  + R+   A ++   M + G  P +ST+ 
Sbjct: 451 RIEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYT 510

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
           +L E     GL KEA+ +L ++ ++
Sbjct: 511 ILIEGLTYEGLVKEARELLGELCSR 535



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 190/386 (49%), Gaps = 1/386 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           +P   TY TL+  L  + R  +   ++  +   G  PD + +  ++ A  +    ++AM 
Sbjct: 153 EPDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMK 212

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              +M+  G  P   TYN ++ G    G+ +++++ L  +   G  +PN  +YN++++  
Sbjct: 213 LLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHG-CEPNTVSYNIVLKGL 271

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C  +   +A  +M +M+  G  P+VVT+N + +   + G  + A EV+ ++   G  PN 
Sbjct: 272 CTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNS 331

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            +   I+  +CK+ K+  A+ F   M   G +P++V +N L+       + D   E+L  
Sbjct: 332 LSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQ 391

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           +K+    P +I+Y+T+++  + AG   +  E+ ++M   G++PD   YS ++ G  RE  
Sbjct: 392 LKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDR 451

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            E+A      + + G  PN V++  I+ G C       AI++F  M  +G  PN  T+  
Sbjct: 452 IEEAIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTI 511

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGV 489
           L+ G +       A E+L  + + GV
Sbjct: 512 LIEGLTYEGLVKEARELLGELCSRGV 537



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 93/375 (24%), Positives = 190/375 (50%), Gaps = 9/375 (2%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           A+I     SG   EA         +   P    YN ++ GY + G+ + + +L+  M  E
Sbjct: 99  ALIKKLCASGRTAEARRVL-----AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPME 153

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
               P+  TYN L+R  C       A  V+  M   G  PDVVTY  +  A  +     Q
Sbjct: 154 ----PDSYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQ 209

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A +++ EM   G  P+  T  ++++G C+EG++ +A+ F +++  +G  PN V +N+++K
Sbjct: 210 AMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLK 269

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           G       +  ++++A M +    P+V+T++ +++     G ++   E+ D + K G  P
Sbjct: 270 GLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTP 329

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           ++ +Y+ +   + ++++ ++A   +  M+  G +P++V + T+++  C  G +D A+E+ 
Sbjct: 330 NSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELL 389

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            ++ + G +P L ++ T++ G ++A +   A E+L  M   G+ P   T+  ++      
Sbjct: 390 HQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCRE 449

Query: 507 GLTKEAKRILSKIKN 521
              +EA R   K+++
Sbjct: 450 DRIEEAIRAFCKVQD 464



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 173/383 (45%), Gaps = 36/383 (9%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+ +  +R   ++A  + + +   G  P ++TY  ++  +  + R +     + 
Sbjct: 191 VVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLK 250

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G +P+++ +N V+     +   E+A     +M + G  P   T+N LI      G
Sbjct: 251 SLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRG 310

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E ++++LD + + G   PN  +YN ++ A+C +K +  A   +  M + G  PD+V+Y
Sbjct: 311 LVEPAMEVLDQIPKYG-CTPNSLSYNPILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSY 369

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+ TA  + GE D A E++ +++  G  P   +   +I G  K GK KEAL     M  
Sbjct: 370 NTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAGKTKEALELLNEMVT 429

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P                                   D+ITYSTI +       +++
Sbjct: 430 KGLQP-----------------------------------DIITYSTISSGLCREDRIEE 454

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
               F  +   GI+P+   Y+ +  G  + +E   A +L + MI +G  PN   +T +I 
Sbjct: 455 AIRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIE 514

Query: 432 GWCSDGSMDRAIEVFDKMCEHGV 454
           G   +G +  A E+  ++C  GV
Sbjct: 515 GLTYEGLVKEARELLGELCSRGV 537



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 74/262 (28%), Positives = 131/262 (50%), Gaps = 5/262 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L  RG  + A  + + + + G  P+ ++Y  +L A   QK+ +   + + 
Sbjct: 296 VVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAFVE 355

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  PD + +N ++ A    G ++ A++   ++K+ G TP   +YNT+I G   AG
Sbjct: 356 LMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTKAG 415

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E+++LL+ M  +G ++P++ TY+ +    C E  I EA     K+   G++P+ V Y
Sbjct: 416 KTKEALELLNEMVTKG-LQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVLY 474

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N I     +  E   A ++ + M  NG  PN  T  I+I G   EG +KEA      +  
Sbjct: 475 NAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELCS 534

Query: 312 YGVHPNLVIFNLLIKGFVEIMD 333
            GV    V   L+ K  + ++D
Sbjct: 535 RGV----VSKGLINKAAIRLLD 552


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 222/452 (49%), Gaps = 1/452 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   +++ L + G  + ++ +F  + E G  P +VTY +L+           + S+ 
Sbjct: 229 SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 288

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++++ G  PD I +N +IN + +   M  A + F +MK +GL P   TY+TLI  +   
Sbjct: 289 NEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKE 348

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  + ++KLL  M R G + PN  TY  L+ A C   N+TEAW +++ M  +G+K ++VT
Sbjct: 349 GMMQGAIKLLXDMRRTG-LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 407

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +     + G   +AEEV   M  +G+ PN +    ++ GY K  ++++A++  + M 
Sbjct: 408 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 467

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E  + P+L+++  +I G       +    +L  MK   ++ + +  +TI++A+  AG   
Sbjct: 468 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 527

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                F +M   G++     Y +L  G       E A +    M+  G  PNV ++T++I
Sbjct: 528 DALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 587

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C +  ++ A ++FD+M   G++P++  F  L+ G  +      A  ++  M    + 
Sbjct: 588 DGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIE 647

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
                +  L       G   +A++  +++  K
Sbjct: 648 FDLHVYTSLVSGFSQCGELHQARKFFNEMIEK 679



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 214/453 (47%), Gaps = 1/453 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L +  +E G  +EA   F+ +      P   +   LL  L+       +    + +   G
Sbjct: 166 LFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAG 225

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P    +N +I+   + G++E +   F +M+E GL+P   TYN+LI GYG  G  EE  
Sbjct: 226 IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVA 285

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L + M   G V P++ TYN L+  +C  + +  A+    +M  +G+KP+VVTY+T+  A
Sbjct: 286 SLFNEMKDVGCV-PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDA 344

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G    A +++ +M   G+ PN  T   +I   CK G + EA +    M + GV  N
Sbjct: 345 FCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLN 404

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +  L+ G  +       +EV   M +  ++P+   Y+ +++ +  A  M+   +I  
Sbjct: 405 IVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILK 464

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M +  IKPD   Y  +  G+  +++ E+ + +L  M   G   N VI TTII  +   G
Sbjct: 465 QMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAG 524

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
               A+  F +M + GV   + T+  L+ G  EA     A +    M + G+ P  + + 
Sbjct: 525 KSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYT 584

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNEMEA 530
            L +        + AK++  +++ +  T ++ A
Sbjct: 585 SLIDGLCXNNCIESAKKLFDEMQCRGMTPDITA 617



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/377 (25%), Positives = 192/377 (50%), Gaps = 1/377 (0%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           F+ + + F E G +EEA + F +M+     P   + N L+     +G  +   K  + M 
Sbjct: 163 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 222

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
             G + P++ TYNV++   C E ++  +  +  +M   G+ PDVVTYN++   Y + G  
Sbjct: 223 GAG-IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           ++   +  EM+  G  P+  T   +I+ YCK  K+  A  +   MK  G+ PN+V ++ L
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I  F +     G  ++L  M+   + P+  TY+++++A   AG + +  ++ +DM +AG+
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 401

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           K +   Y+ L  G  +     +AEE+  +M++ G  PN  ++T ++ G+     M+ A++
Sbjct: 402 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 461

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           +  +M E  + P+L  + +++WG+   R+    + IL+ MK+ G+         + +A  
Sbjct: 462 ILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF 521

Query: 505 ATGLTKEAKRILSKIKN 521
             G + +A     ++++
Sbjct: 522 KAGKSSDALNFFQEMQD 538



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 186/378 (49%), Gaps = 1/378 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+++  + G  Q A  +  ++   G  P+  TYT+L+ A            +++
Sbjct: 335 VVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 394

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G+  + + + A+++   ++G M EA + F  M + G++P    Y  L+ GY  A 
Sbjct: 395 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 454

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E+++K+L  M+ E N+KP+L  Y  ++   C+++ + E   ++ +M + G+  + V  
Sbjct: 455 RMEDAMKILKQMT-ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIS 513

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            TI  AY + G++  A     EM+  GV+    T  ++I G C+ G ++ A+ +   M  
Sbjct: 514 TTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLS 573

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN+ ++  LI G       +   ++   M+   + PD+  ++ +++     G + +
Sbjct: 574 LGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQE 633

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +   M +  I+ D H Y+ L  G+ +  E  +A +    MIE G  P  V+   ++ 
Sbjct: 634 ALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 693

Query: 432 GWCSDGSMDRAIEVFDKM 449
            +   G +D AIE+ ++M
Sbjct: 694 EYYKRGQLDEAIELKNEM 711



 Score = 92.0 bits (227), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/201 (26%), Positives = 103/201 (51%)

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           +F++L   FVE+   +  +E  + M+ FR  P   + + +++  S +G     ++ F+DM
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
             AGI P    Y+++     +E + E +  L + M E G  P+VV + ++I G+   GS+
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           +    +F++M + G  P++ T+  L+  Y +  +  RA E    MK  G+ P   T+  L
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341

Query: 500 AEARRATGLTKEAKRILSKIK 520
            +A    G+ + A ++L  ++
Sbjct: 342 IDAFCKEGMMQGAIKLLXDMR 362



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/185 (24%), Positives = 84/185 (45%), Gaps = 4/185 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L++ L E G  + A   F  ++  G +P++  YT+L+  L       S   + 
Sbjct: 544 TIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLF 603

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++  GM PD   F A+I+   + GN++EA+    +M E  +      Y +L+ G+   
Sbjct: 604 DEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQC 663

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW---NVMHKMAASGMKPD 247
           G+  ++ K  + M  +G + P       L+R +     + EA    N M +MA S     
Sbjct: 664 GELHQARKFFNEMIEKG-ILPEEVLCICLLREYYKRGQLDEAIELKNEMERMAYSFEFDA 722

Query: 248 VVTYN 252
            + YN
Sbjct: 723 QLAYN 727


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 229/439 (52%), Gaps = 22/439 (5%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C+ + R+ T L+ +L +RG   +A  +F+ +I  G KP++ TYT L+  L    +
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGK 351

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
               + +  ++ ++G+ P  I +NA+IN + + G +  A +    M++    P   T+N 
Sbjct: 352 IEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L++G    GKP ++V LL  M   G + P++ +YNVL+   C E ++  A+ ++  M + 
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNG-LSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSF 470

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            ++PD +T+  I  A+ + G+AD A   +  M   G+  +  T   +I G C  GK ++A
Sbjct: 471 DLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDA 530

Query: 303 LRFARTMKEYGV----HPNLVIFNLLIKGFVEIMDRDGVDEVLALM---KEFRVNPDVIT 355
           L    T+ +  +    H   VI ++L KG         + E LA++    +  + P V+T
Sbjct: 531 LFILETLVKMRMLTTPHSLNVILDMLSKGC-------KLKEELAMLGKINKLGLVPSVVT 583

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+T+++    +G +     + + M  +G  P+ + Y+I+  G  +    E+AE+LL  M 
Sbjct: 584 YTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQ 643

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           +SG  PN V +T ++ G+ ++G +DRA+E    M E G   N + + +L+ G+  +++  
Sbjct: 644 DSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGI 703

Query: 476 R------AEEILQIMKAFG 488
           R       +E++ +++  G
Sbjct: 704 RETDPECIKELISVVEQLG 722



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 203/463 (43%), Gaps = 41/463 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS---IHSIMSQVE 134
           ++N+L + G  + A+     +++ G        T+LL              +  +MS+  
Sbjct: 201 IVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSR-- 258

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           E    P+S+ ++ +I+   E G +EEA     +M E G  P+T TY  LIK     G  +
Sbjct: 259 EGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLID 318

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++  L D M   G  KPN+ TY VL+   C +  I EA  V  KM   G+ P V+TYN +
Sbjct: 319 KAFNLFDEMIARG-CKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNAL 377

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              Y ++G    A E++  ME    +PN RT   ++ G C+ GK  +A+   + M + G+
Sbjct: 378 INGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGL 437

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P++V +N+LI G       +   ++L  M  F + PD +T++ I+NA+   G  D    
Sbjct: 438 SPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASA 497

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES----------------- 417
               M + GI  D    + L  G     +   A  +L T+++                  
Sbjct: 498 FLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLS 557

Query: 418 ------------------GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
                             G  P+VV +TT++ G    G +  +  + + M   G  PN+ 
Sbjct: 558 KGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVY 617

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            +  ++ G  +  +   AE++L  M+  GV P   T+ ++ + 
Sbjct: 618 PYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKG 660



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/467 (23%), Positives = 216/467 (46%), Gaps = 37/467 (7%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A   +  +   G    ++ Y T++ AL       +    M ++ + G   DS    +++ 
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLL 238

Query: 151 AFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
            F    N+ +A+  F  M +E    P + +Y+ LI G    G+ EE+  L D M  +G  
Sbjct: 239 GFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG-C 297

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +P+ RTY VL++A C+   I +A+N+  +M A G KP+V TY  +     ++G+ ++A  
Sbjct: 298 QPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANG 357

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           V  +M  +G+ P+  T   +I+GYCK+G++  A      M++    PN+  FN L++G  
Sbjct: 358 VCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLC 417

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
            +        +L  M +  ++PD+++Y+ +++     G M+   ++   M    ++PD  
Sbjct: 418 RVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCL 477

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG------------ 437
            ++ +   + ++ + + A   L  M+  G   + V  TT+I G C+ G            
Sbjct: 478 TFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETL 537

Query: 438 ----------SMDRAIEVFDKMC-------------EHGVSPNLKTFETLMWGYSEARQP 474
                     S++  +++  K C             + G+ P++ T+ TL+ G   +   
Sbjct: 538 VKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDI 597

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             +  +L++MK  G  P    + ++       G  +EA+++LS +++
Sbjct: 598 SGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQD 644


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 215/464 (46%), Gaps = 35/464 (7%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++N L        A  +   +   G KP++V Y+TL+     + R      ++  +
Sbjct: 351 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 410

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G+ PD   +NA+I+  S++G MEEA     +++  GL P   T+   I GY   GK 
Sbjct: 411 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 470

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+ K  D M   G + PN   Y VL+       N+ EA ++   + A G+ PDV T + 
Sbjct: 471 TEAAKYFDEMLDHG-LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSA 529

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
                 +NG   +A +V  E++  G+ P+  T   +ISG+CK+G++++A      M   G
Sbjct: 530 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 589

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + PN+ I+N L+ G  +  D     ++   M E  + PD +TYST+++ +  +  + +  
Sbjct: 590 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 649

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF-------------- 419
            +F +M   G++P +  Y+ L  G  +E + EKA  L   M++ GF              
Sbjct: 650 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFNTLIDGYC 709

Query: 420 --------------------HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
                                P+ V +TT+I   C  G M+ A  +F +M E  +  +  
Sbjct: 710 KSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTV 769

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           T+ +LM+GY++  Q      + + M A GV P + T+ L+  A 
Sbjct: 770 TYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAH 813



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 228/480 (47%), Gaps = 37/480 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + GK ++A  I   +I  G KP+  T+  L+     +        ++ ++E+  
Sbjct: 285 LIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 344

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P ++ + A+IN      ++  A     KM  SGL P    Y+TLI GY   G+ EE+ 
Sbjct: 345 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEAR 404

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LLD MS  G V P++  YN ++        + EA   + ++   G+KPD VT+      
Sbjct: 405 RLLDGMSCSG-VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 463

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNG---------------------------------- 283
           Y++ G+  +A +   EM  +G+ PN                                   
Sbjct: 464 YSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPD 523

Query: 284 -RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
            +TC   I G  K G+++EAL+    +KE G+ P++  ++ LI GF +  + +   E+  
Sbjct: 524 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 583

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M    + P++  Y+ +++    +G + + +++FD M + G++PD+  YS +  GY + +
Sbjct: 584 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 643

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
              +A  L   M   G  P+  ++  ++ G C +G M++A+ +F +M + G +  L +F 
Sbjct: 644 NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFN 702

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           TL+ GY ++ +   A ++ Q M A  + P   T+  + +     G  +EA  +  +++ +
Sbjct: 703 TLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER 762



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 206/467 (44%), Gaps = 71/467 (15%)

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNME 159
           E G  P+  TYT + A L   KR N       ++++ G+ PD    +A+I+ F   G+++
Sbjct: 202 EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 261

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           E +     M   G+     TYN LI G    GK E++ ++L  M   G  KPN RT+ +L
Sbjct: 262 EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLG-CKPNSRTFCLL 320

Query: 220 VRAWCNEKNITEAW-----------------------------------NVMHKMAASGM 244
           +  +C E N+  A                                     ++ KM  SG+
Sbjct: 321 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 380

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEV---------------------------------- 270
           KP+VV Y+T+   YA  G  ++A  +                                  
Sbjct: 381 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 440

Query: 271 -IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
            ++E++  G++P+  T G  I GY K GK+ EA ++   M ++G+ PN  ++ +LI G  
Sbjct: 441 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 500

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +  +      +   +    V PDV T S  ++     G + +  ++F ++ + G+ PD  
Sbjct: 501 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 560

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            YS L  G+ ++ E EKA EL   M   G  PN+ I+  ++ G C  G + RA ++FD M
Sbjct: 561 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 620

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            E G+ P+  T+ T++ GY ++     A  +   M + GV P    +
Sbjct: 621 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY 667



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 204/436 (46%), Gaps = 2/436 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  EA   F+ +++ G  P+   YT L+             SI   +   G+ PD    
Sbjct: 468 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 527

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           +A I+   ++G ++EA+  F ++KE GL P   TY++LI G+   G+ E++ +L D M  
Sbjct: 528 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 587

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G + PN+  YN LV   C   +I  A  +   M   G++PD VTY+T+   Y ++    
Sbjct: 588 KG-IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVA 646

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  +  EM   GVQP+      ++ G CKEG +++A+   R M + G    L  FN LI
Sbjct: 647 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLI 705

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G+ +        ++   M   ++ PD +TY+T+++    AG M++   +F +M +  + 
Sbjct: 706 DGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI 765

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
            D   Y+ L  GY +  +  +   L   M+  G  P+ V +  +I   C + ++  A ++
Sbjct: 766 VDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKL 825

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
            D++   G+       + L+    +      A ++L  M   G+ P  +    L  +   
Sbjct: 826 RDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHE 885

Query: 506 TGLTKEAKRILSKIKN 521
            G   EA R+   +K+
Sbjct: 886 AGKMDEATRVFEGVKS 901



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/444 (24%), Positives = 216/444 (48%), Gaps = 2/444 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L+N   + G   EA +IF +L   G  P + T +  +  L    R      + S+++E
Sbjct: 493 TVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKE 552

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ PD   ++++I+ F + G +E+A +   +M   G+ P    YN L+ G   +G  + 
Sbjct: 553 KGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQR 612

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + KL D M  +G ++P+  TY+ ++  +C  +N+ EA+++ H+M + G++P    YN + 
Sbjct: 613 ARKLFDGMPEKG-LEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALV 671

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G+ ++A  +  EM   G      +   +I GYCK  KI+EA +  + M    + 
Sbjct: 672 HGCCKEGDMEKAMNLFREMLQKGFATT-LSFNTLIDGYCKSCKIQEASQLFQEMIAKQIM 730

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+ V +  +I    +    +  + +   M+E  +  D +TY+++M  ++  G   +   +
Sbjct: 731 PDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFAL 790

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F+ M   G+KPD   Y ++   + +E    +A +L   ++  G      I   +I+  C 
Sbjct: 791 FEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCK 850

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              +  A ++ D+M E G+ P+L    TL+  + EA +   A  + + +K+ G+ P  +T
Sbjct: 851 REDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTT 910

Query: 496 FLLLAEARRATGLTKEAKRILSKI 519
            + L         +++A+ ++ ++
Sbjct: 911 LIDLVNGNLNDTDSEDARNLIKQL 934



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 188/398 (47%), Gaps = 19/398 (4%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFW------------------KMKESGLTPTTSTYNTLI 184
           + F+ +I+++   G ++EA + F+                   M E GL P T TY  + 
Sbjct: 157 VVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIIT 216

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G   A +  E+    + M + G +KP+    + L+  +  E +I E   +   M + G+
Sbjct: 217 AGLCRAKRMNEAKLTFEEMQKTG-LKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGI 275

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
             +++TYN +     + G+ ++A E++  M   G +PN RT  ++I GYC+E  +  AL 
Sbjct: 276 PINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALE 335

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               M++  + P+ V +  +I G     D    +++L  M    + P+V+ YST++  ++
Sbjct: 336 LLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYA 395

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
           + G +++ + + D M  +G+ PD   Y+ +     +  + E+A   L+ +   G  P+ V
Sbjct: 396 SEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAV 455

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            F   I G+   G M  A + FD+M +HG+ PN   +  L+ G+ +A     A  I + +
Sbjct: 456 TFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHL 515

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            A GV P   T           G  +EA ++ S++K K
Sbjct: 516 HALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 553



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 89/338 (26%), Positives = 168/338 (49%), Gaps = 2/338 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + G  Q A+ +F+ + E G +P  VTY+T++      +      S+  ++   G
Sbjct: 600 LVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKG 659

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P S  +NA+++   + G+ME+AM+ F +M + G   TT ++NTLI GY  + K +E+ 
Sbjct: 660 VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFA-TTLSFNTLIDGYCKSCKIQEAS 718

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L   M  +  + P+  TY  ++   C    + EA  +  +M    +  D VTY ++   
Sbjct: 719 QLFQEMIAK-QIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYG 777

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G++ +   +  +M   GV+P+  T G++I  +CKE  + EA +    +   G+   
Sbjct: 778 YNKLGQSSEVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTK 837

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             I +LLI    +  D     ++L  M E  + P +   ST++ ++  AG MD+   +F+
Sbjct: 838 GTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFE 897

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
            +   G+ PD      L  G + + + E A  L+  ++
Sbjct: 898 GVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 935



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/257 (26%), Positives = 113/257 (43%), Gaps = 36/257 (14%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  S   L++   +  K QEA  +F  +I     P  VTYTT                  
Sbjct: 697 TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT------------------ 738

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
                            VI+   ++G MEEA   F +M+E  L   T TY +L+ GY   
Sbjct: 739 -----------------VIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKL 781

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+  E   L + M  +G VKP+  TY +++ A C E N+ EA+ +  ++   GM      
Sbjct: 782 GQSSEVFALFEKMVAKG-VKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI 840

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           ++ + TA  +  +  +A +++ EM   G++P+   C  ++  + + GK+ EA R    +K
Sbjct: 841 HDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVK 900

Query: 311 EYGVHPNLVIFNLLIKG 327
             G+ P+      L+ G
Sbjct: 901 SLGLVPDTTTLIDLVNG 917


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 210/419 (50%), Gaps = 1/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+   +  G  Q++  IF  +   G  PS+ T   +L ++       S+ S + ++ +  
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   FN +IN     G+ E++     KM++SG  PT  TYNT++  Y   G+ + ++
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LLD M  +G V  ++ TYN+L+   C    I + + ++  M    + P+ VTYNT+   
Sbjct: 249 ELLDHMKSKG-VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 307

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           ++  G+   A +++ EM   G+ PN  T   +I G+  EG  KEAL+    M+  G+ P+
Sbjct: 308 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 367

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V + +L+ G  +  + D        MK   V    ITY+ +++     GF+D+   + +
Sbjct: 368 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 427

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K GI PD   YS L  G+ +    + A+E++  +   G  PN +I++T+I   C  G
Sbjct: 428 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            +  AI +++ M   G + +  TF  L+    +A +   AEE ++ M + G+ P   +F
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 546



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 203/423 (47%), Gaps = 1/423 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           + ++ C  V +   L+N L   G  +++  +   + + G+ P++VTY T+L     + RF
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            +   ++  ++  G+D D   +N +I+    S  + +       M++  + P   TYNTL
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G+   GK   + +LL+ M   G + PN  T+N L+    +E N  EA  + + M A G
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFG-LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           + P  V+Y  +     +N E D A    + M+ NGV     T   +I G CK G + EA+
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M + G+ P++V ++ LI GF ++       E++  +    ++P+ I YST++   
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G + +   I++ M   G   D   +++L     +  +  +AEE +  M   G  PN 
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           V F  +I+G+ + G   +A  VFD+M + G  P   T+ +L+ G  +      AE+ L+ 
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603

Query: 484 MKA 486
           + A
Sbjct: 604 LHA 606



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 178/363 (49%), Gaps = 1/363 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P+ VTY TL+   + + +      +++++   G+ P+ + FNA+I+     GN +EA+  
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F+ M+  GLTP+  +Y  L+ G     + + +      M R G     + TY  ++   C
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI-TYTGMIDGLC 414

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
               + EA  ++++M+  G+ PD+VTY+ +   + + G    A+E++  +   G+ PNG 
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
               +I   C+ G +KEA+R    M   G   +   FN+L+    +       +E +  M
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
               + P+ +++  ++N +  +G   K   +FD+M K G  P    Y  L KG  +    
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            +AE+ L ++       + V++ T+++  C  G++ +A+ +F +M +  + P+  T+ +L
Sbjct: 595 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 654

Query: 465 MWG 467
           + G
Sbjct: 655 ISG 657



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 103/456 (22%), Positives = 202/456 (44%), Gaps = 37/456 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +++ L + G   EA  + N + + G  P +VTY+ L+       RF +   I+ ++  
Sbjct: 407 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 466

Query: 136 NGMDPDSIF-----------------------------------FNAVINAFSESGNMEE 160
            G+ P+ I                                    FN ++ +  ++G + E
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A +    M   G+ P T +++ LI GYG +G+  ++  + D M++ G+  P   TY  L+
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH-HPTFFTYGSLL 585

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           +  C   ++ EA   +  + A     D V YNT+ TA  ++G   +A  +  EM    + 
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 645

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYG-VHPNLVIFNLLIKGFVEIMDRDGVDE 339
           P+  T   +ISG C++GK   A+ FA+  +  G V PN V++   + G  +         
Sbjct: 646 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 705

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
               M      PD++T + +++ +S  G ++K  ++  +MG     P+   Y+IL  GY 
Sbjct: 706 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 765

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           + ++   +  L  ++I +G  P+ +   +++ G C    ++  +++       GV  +  
Sbjct: 766 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 825

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           TF  L+       +   A +++++M + G+   K T
Sbjct: 826 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 106/500 (21%), Positives = 203/500 (40%), Gaps = 84/500 (16%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-------IQKRFNSI 126
            S   L+N     G+  +A ++F+ + + GH P+  TY +LL  L         +K   S+
Sbjct: 545  SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604

Query: 127  HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
            H++ + V       D++ +N ++ A  +SGN+ +A+  F +M +  + P + TY +LI G
Sbjct: 605  HAVPAAV-------DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657

Query: 187  YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
                GK   ++         GNV PN   Y   V                 +M   G  P
Sbjct: 658  LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 717

Query: 247  DVVTYNTIATAYAQNGEADQAEEVIVEMEH------------------------------ 276
            D+VT N +   Y++ G+ ++  +++ EM +                              
Sbjct: 718  DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777

Query: 277  -----NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK----- 326
                 NG+ P+  TC  ++ G C+   ++  L+  +     GV  +   FN+LI      
Sbjct: 778  RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 837

Query: 327  -------GFVEIM-------DRDGVDEVLALM------KEFR----------VNPDVITY 356
                     V++M       D+D  D +++++      +E R          ++P+   Y
Sbjct: 838  GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897

Query: 357  STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
              ++N     G +     + ++M    I P   A S + +   +  + ++A  LL  M++
Sbjct: 898  IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957

Query: 417  SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
                P +  FTT++   C +G++  A+E+   M   G+  +L ++  L+ G         
Sbjct: 958  MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1017

Query: 477  AEEILQIMKAFGVHPQKSTF 496
            A E+ + MK  G     +T+
Sbjct: 1018 AFELYEEMKGDGFLANATTY 1037



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/442 (20%), Positives = 190/442 (42%), Gaps = 41/442 (9%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM--SQVEE 135
            L+ ++ + G   +A ++F  +++    P   TYT+L++ L   ++  ++ +I+   + E 
Sbjct: 619  LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC--RKGKTVIAILFAKEAEA 676

Query: 136  NG-MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G + P+ + +   ++   ++G  +  +    +M   G TP   T N +I GY   GK E
Sbjct: 677  RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736

Query: 195  ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT---- 250
            ++  LL  M  + N  PNL TYN+L+  +   K+++ ++ +   +  +G+ PD +T    
Sbjct: 737  KTNDLLPEMGNQ-NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795

Query: 251  -------------------------------YNTIATAYAQNGEADQAEEVIVEMEHNGV 279
                                           +N + +    NGE + A +++  M   G+
Sbjct: 796  VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855

Query: 280  QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
              +  TC  ++S   +  + +E+      M + G+ P    +  LI G   + D      
Sbjct: 856  SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 915

Query: 340  VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
            V   M   ++ P  +  S ++ A +  G  D+   +   M K  + P   +++ L     
Sbjct: 916  VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCC 975

Query: 400  REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
            +     +A EL + M   G   ++V +  +I+G C+ G M  A E++++M   G   N  
Sbjct: 976  KNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANAT 1035

Query: 460  TFETLMWGYSEARQPWRAEEIL 481
            T++ L+ G       +   +I+
Sbjct: 1036 TYKALIRGLLARETAFSGADII 1057



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 145/318 (45%)

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
           LM+       N   Y++L+R +  E  I ++  +   M   G  P V T N I  +  ++
Sbjct: 112 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS 171

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           GE       + EM    + P+  T  I+I+  C EG  +++    + M++ G  P +V +
Sbjct: 172 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 231

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N ++  + +        E+L  MK   V+ DV TY+ +++    +  + K   +  DM K
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
             I P+   Y+ L  G+  E +   A +LL  M+  G  PN V F  +I G  S+G+   
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A+++F  M   G++P+  ++  L+ G  +  +   A      MK  GV   + T+  + +
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 502 ARRATGLTKEAKRILSKI 519
                G   EA  +L+++
Sbjct: 412 GLCKNGFLDEAVVLLNEM 429



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 111/238 (46%)

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           I+I  Y +EG I+++L   R M  YG +P++   N ++   V+  +   V   L  M + 
Sbjct: 128 ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR 187

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
           ++ PDV T++ ++N     G  +K   +   M K+G  P    Y+ +   Y ++   + A
Sbjct: 188 KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 247

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            ELL  M   G   +V  +  +I   C    + +   +   M +  + PN  T+ TL+ G
Sbjct: 248 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 307

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
           +S   +   A ++L  M +FG+ P   TF  L +   + G  KEA ++   ++ K  T
Sbjct: 308 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 6/173 (3%)

Query: 342 ALMKEFRV---NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           ALM  +R+   NP V  Y  ++  +   G +    EIF  MG  G  P  +  + +    
Sbjct: 111 ALMTTYRLCNSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 168

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           V+  E       L  M++    P+V  F  +I+  C++GS +++  +  KM + G +P +
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 228

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-LLLAEARRATGLTK 510
            T+ T++  Y +  +   A E+L  MK+ GV     T+ +L+ +  R+  + K
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 281



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/210 (20%), Positives = 97/210 (46%), Gaps = 7/210 (3%)

Query: 64   MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
            ++K++C    +M  ++N      + QE++ + + + + G  P    Y  L+  L      
Sbjct: 857  LDKDTCD---AMVSVLN---RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDI 910

Query: 124  NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
             +   +  ++  + + P ++  +A++ A ++ G  +EA      M +  L PT +++ TL
Sbjct: 911  KTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 970

Query: 184  IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
            +      G   E+++L  +MS  G +K +L +YNVL+   C + ++  A+ +  +M   G
Sbjct: 971  MHLCCKNGNVIEALELRVVMSNCG-LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDG 1029

Query: 244  MKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
               +  TY  +         A    ++I++
Sbjct: 1030 FLANATTYKALIRGLLARETAFSGADIILK 1059


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 209/437 (47%), Gaps = 2/437 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF- 144
           G+  + +  F  L   G +P    +   + A            ++ ++  +G  P + F 
Sbjct: 143 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 202

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +N VI     +G   +A++ F +M E  + P   TYNT+I G+   G  E   +L D M 
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 262

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
             G +KPN  TYNVL+   C    + E   ++ +MA+  M PD  TY+ +    ++NG++
Sbjct: 263 CHG-LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 321

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
                +  +   NGV     TC I+++G CK+GK+  A    +++   G+ P  VI+N L
Sbjct: 322 KAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 381

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G+ +  + +G       MK   + PD ITY+ ++N    A  +   +++  +M   G+
Sbjct: 382 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 441

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P    ++ L   Y R  + EK   +L  M E+G  PNVV + +I++ +C +G +  A+ 
Sbjct: 442 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 501

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + D M    V PN + +  ++  Y E     +A  +++ MK+ G+ P   T+ LL +   
Sbjct: 502 ILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC 561

Query: 505 ATGLTKEAKRILSKIKN 521
                 EA+ I++ + N
Sbjct: 562 NQSQISEAEEIINSLSN 578



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/407 (26%), Positives = 197/407 (48%), Gaps = 1/407 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L   G+  E  A+ + +      P   TY+ L   L+      ++ S+  +  +NG
Sbjct: 276 LLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNG 335

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +       + ++N   + G +  A +    +  +GL PT   YNTLI GY   G+ E + 
Sbjct: 336 VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAF 395

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M +  ++KP+  TYN L+   C  + IT A +++ +M  +G+ P V T+NT+  A
Sbjct: 396 STFGQM-KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 454

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G+ ++   V+ EM+ NG++PN  + G I++ +CK GKI EA+     M    V PN
Sbjct: 455 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 514

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             ++N +I  +VE    D    ++  MK   ++P ++TY+ ++        + + +EI +
Sbjct: 515 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 574

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +    + PDA +Y+ L          +KA +L   M + G    V  +  +ISG    G
Sbjct: 575 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 634

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            ++    ++ KM ++ V P+      ++  YS+     +AE++ + M
Sbjct: 635 RLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEM 681



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 219/455 (48%), Gaps = 11/455 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++  I+ G  +    + + ++  G KP+ +TY  LL+ L    R     +++ ++    
Sbjct: 241 MIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 300

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M PD   ++ + +  S +G+ +  +  F K  ++G+T    T + L+ G    GK   + 
Sbjct: 301 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAE 360

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L  +   G V P    YN L+  +C    +  A++   +M +  +KPD +TYN +   
Sbjct: 361 EVLQSLVNAGLV-PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALING 419

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +      A+++++EM+ NGV P   T   +I  Y + G++++       M+E G+ PN
Sbjct: 420 LCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 479

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKE 374
           +V +  ++  F +      + E +A++ +     V P+   Y+ I++A+   G  D+   
Sbjct: 480 VVSYGSIVNAFCK---NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFI 536

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + + M   GI P    Y++L KG   + +  +AEE++ ++      P+ V + T+IS  C
Sbjct: 537 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC 596

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G++D+A+++  +M ++G+   ++T+  L+ G   A +    E + Q M    V P  +
Sbjct: 597 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 656

Query: 495 TFLLLAEARRATGLTKEA----KRILSKIKNKERT 525
              ++ EA    G   +A    K +L K  N + T
Sbjct: 657 IHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDDT 691



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 72/333 (21%), Positives = 138/333 (41%), Gaps = 37/333 (11%)

Query: 193 PEESVKLLDLMSREGNVK-PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           P+ +++LL  ++ E     P+L + N+L+ A  +     +       +A++G +PD   +
Sbjct: 108 PDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAW 167

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQP-NGRTCGIIISGYCKEGKIKEALRFARTMK 310
           N    A    G+  +A  ++  M  +G  P N  +  ++I+G  + G+  +A        
Sbjct: 168 NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDA-------- 219

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                             VE+ D          M E  V P+ ITY+T+++     G ++
Sbjct: 220 ------------------VEVFDE---------MTERAVLPNHITYNTMIDGHIKGGDLE 252

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               + D M   G+KP+A  Y++L  G  R     +   LL  M      P+   ++ + 
Sbjct: 253 AGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 312

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G   +G     + +F K  ++GV+    T   L+ G  +  +   AEE+LQ +   G+ 
Sbjct: 313 DGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 372

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           P +  +  L      TG  + A     ++K++ 
Sbjct: 373 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 405



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 1/203 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   ++N+  + GK  EA AI +++      P+   Y  ++ A       +    ++ 
Sbjct: 480 VVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVE 539

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++ NG+ P  + +N +I        + EA +    +    L P   +YNTLI      G
Sbjct: 540 KMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRG 599

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++++ L   M + G +K  +RTY+ L+        + E   +  KM  + + P    +
Sbjct: 600 NIDKALDLQQRMHKYG-IKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIH 658

Query: 252 NTIATAYAQNGEADQAEEVIVEM 274
           N +  AY++ G   +AE++  EM
Sbjct: 659 NIMVEAYSKYGNEIKAEDLRKEM 681


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/512 (24%), Positives = 239/512 (46%), Gaps = 47/512 (9%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + GK ++A  I   +I  G KP+  T+  L+     +        ++ ++E+  
Sbjct: 86  LIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRN 145

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P ++ + A+IN      ++  A     KM  SGL P    Y+TLI GY   G+ EE+ 
Sbjct: 146 LVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEAR 205

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LLD MS  G V P++  YN ++        + EA   + ++   G+KPD VT+      
Sbjct: 206 RLLDGMSCSG-VAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILG 264

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNG---------------------------------- 283
           Y++ G+  +A +   EM  +G+ PN                                   
Sbjct: 265 YSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPD 324

Query: 284 -RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
            +TC   I G  K G+++EAL+    +KE G+ P++  ++ LI GF +  + +   E+  
Sbjct: 325 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 384

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M    + P++  Y+ +++    +G + + +++FD M + G++PD+  YS +  GY + +
Sbjct: 385 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 444

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
              +A  L   M   G  P+  ++  ++ G C +G M++A+ +F +M + G +  L +F 
Sbjct: 445 NVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFN 503

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           TL+ GY ++ +   A ++ Q M A  + P   T+  + +     G  +EA  +  +++  
Sbjct: 504 TLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ-- 561

Query: 523 ERTNEMEAEEDIPVESLERLYHKEATTASYPN 554
                   E ++ V+++  L+ K       P+
Sbjct: 562 --------ERNLIVDTVFALFEKMVAKGVKPD 585



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/412 (27%), Positives = 203/412 (49%), Gaps = 2/412 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++N L        A  +   +   G KP++V Y+TL+     + R      ++  +
Sbjct: 152 SYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGM 211

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G+ PD   +NA+I+  S++G MEEA     +++  GL P   T+   I GY   GK 
Sbjct: 212 SCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKM 271

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+ K  D M   G + PN   Y VL+       N+ EA ++   + A G+ PDV T + 
Sbjct: 272 TEAAKYFDEMLDHG-LMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSA 330

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
                 +NG   +A +V  E++  G+ P+  T   +ISG+CK+G++++A      M   G
Sbjct: 331 FIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKG 390

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + PN+ I+N L+ G  +  D     ++   M E  + PD +TYST+++ +  +  + +  
Sbjct: 391 IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAF 450

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F +M   G++P +  Y+ L  G  +E + EKA  L   M++ GF    + F T+I G+
Sbjct: 451 SLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGF-ATTLSFNTLIDGY 509

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           C    +  A ++F +M    + P+  T+ T++  + +A +   A  + + M+
Sbjct: 510 CKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQ 561



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 206/467 (44%), Gaps = 71/467 (15%)

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNME 159
           E G  P+  TYT + A L   KR N       ++++ G+ PD    +A+I+ F   G+++
Sbjct: 3   EKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDID 62

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           E +     M   G+     TYN LI G    GK E++ ++L  M   G  KPN RT+ +L
Sbjct: 63  EVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLG-CKPNSRTFCLL 121

Query: 220 VRAWCNEKNITEAW-----------------------------------NVMHKMAASGM 244
           +  +C E N+  A                                     ++ KM  SG+
Sbjct: 122 IEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGL 181

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEV---------------------------------- 270
           KP+VV Y+T+   YA  G  ++A  +                                  
Sbjct: 182 KPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAST 241

Query: 271 -IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
            ++E++  G++P+  T G  I GY K GK+ EA ++   M ++G+ PN  ++ +LI G  
Sbjct: 242 YLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHF 301

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +  +      +   +    V PDV T S  ++     G + +  ++F ++ + G+ PD  
Sbjct: 302 KAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVF 361

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            YS L  G+ ++ E EKA EL   M   G  PN+ I+  ++ G C  G + RA ++FD M
Sbjct: 362 TYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGM 421

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            E G+ P+  T+ T++ GY ++     A  +   M + GV P    +
Sbjct: 422 PEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVY 468



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 212/451 (47%), Gaps = 19/451 (4%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  EA   F+ +++ G  P+   YT L+             SI   +   G+ PD    
Sbjct: 269 GKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTC 328

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           +A I+   ++G ++EA+  F ++KE GL P   TY++LI G+   G+ E++ +L D M  
Sbjct: 329 SAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCL 388

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G + PN+  YN LV   C   +I  A  +   M   G++PD VTY+T+   Y ++    
Sbjct: 389 KG-IAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVA 447

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  +  EM   GVQP+      ++ G CKEG +++A+   R M + G    L  FN LI
Sbjct: 448 EAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLS-FNTLI 506

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM---------------- 369
            G+ +        ++   M   ++ PD +TY+T+++    AG M                
Sbjct: 507 DGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLI 566

Query: 370 -DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            D    +F+ M   G+KPD   Y ++   + +E    +A +L   ++  G      I   
Sbjct: 567 VDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDL 626

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I+  C    +  A ++ D+M E G+ P+L    TL+  + EA +   A  + + +K+ G
Sbjct: 627 LITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLG 686

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           + P  +T + L         +++A+ ++ ++
Sbjct: 687 LVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 172/355 (48%), Gaps = 1/355 (0%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M E GL P T TY  +  G   A +  E+    + M + G +KP+    + L+  +  E 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTG-LKPDYNACSALIDGFMREG 59

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           +I E   +   M + G+  +++TYN +     + G+ ++A E++  M   G +PN RT  
Sbjct: 60  DIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFC 119

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           ++I GYC+E  +  AL     M++  + P+ V +  +I G     D    +++L  M   
Sbjct: 120 LLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFS 179

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            + P+V+ YST++  +++ G +++ + + D M  +G+ PD   Y+ +     +  + E+A
Sbjct: 180 GLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEA 239

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
              L+ +   G  P+ V F   I G+   G M  A + FD+M +HG+ PN   +  L+ G
Sbjct: 240 STYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLING 299

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           + +A     A  I + + A GV P   T           G  +EA ++ S++K K
Sbjct: 300 HFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEK 354



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/395 (24%), Positives = 176/395 (44%), Gaps = 52/395 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++ +  ++ L++ G+ QEA  +F+ L E G  P + TY++L++    Q        +  
Sbjct: 325 VQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHD 384

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ P+   +NA+++   +SG+++ A   F  M E GL P + TY+T+I GY  + 
Sbjct: 385 EMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSE 444

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-------- 243
              E+  L   M  +G V+P+   YN LV   C E ++ +A N+  +M   G        
Sbjct: 445 NVAEAFSLFHEMPSKG-VQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTLSFN 503

Query: 244 --------------------------MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
                                     + PD VTY T+   + + G+ ++A  +  EM+  
Sbjct: 504 TLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQER 563

Query: 278 -----------------GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
                            GV+P+  T G++I  +CKE  + EA +    +   G+     I
Sbjct: 564 NLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTI 623

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
            +LLI    +  D     ++L  M E  + P +   ST++ ++  AG MD+   +F+ + 
Sbjct: 624 HDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVK 683

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
             G+ PD      L  G + + + E A  L+  ++
Sbjct: 684 SLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQLV 718



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 99/222 (44%), Gaps = 19/222 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  S   L++   +  K QEA  +F  +I     P  VTYTT++       +    + + 
Sbjct: 498 TTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLF 557

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++E  +  D++F                    F KM   G+ P   TY  +I  +   
Sbjct: 558 KEMQERNLIVDTVF------------------ALFEKMVAKGVKPDEVTYGLVIYAHCKE 599

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
               E+ KL D +  +G +      +++L+ A C  +++TEA  ++ +M   G+KP +  
Sbjct: 600 DNLVEAFKLRDEVVGKGMLTKG-TIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAA 658

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
            +T+  ++ + G+ D+A  V   ++  G+ P+  T   +++G
Sbjct: 659 CSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNG 700


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 222/452 (49%), Gaps = 1/452 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   +++ L + G  + ++ +F  + E G  P +VTY +L+           + S+ 
Sbjct: 288 SVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLF 347

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++++ G  PD I +N +IN + +   M  A + F +MK +GL P   TY+TLI  +   
Sbjct: 348 NEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKE 407

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  + ++KL   M R G + PN  TY  L+ A C   N+TEAW +++ M  +G+K ++VT
Sbjct: 408 GMMQGAIKLFVDMRRTG-LLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVT 466

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +     + G   +AEEV   M  +G+ PN +    ++ GY K  ++++A++  + M 
Sbjct: 467 YTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMT 526

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E  + P+L+++  +I G       +    +L  MK   ++ + +  +TI++A+  AG   
Sbjct: 527 ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSS 586

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                F +M   G++     Y +L  G  +    E A +    M+  G  PNV ++T++I
Sbjct: 587 DALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLI 646

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C +  ++ A ++FD+M   G++P++  F  L+ G  +      A  ++  M    + 
Sbjct: 647 DGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIE 706

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
                +  L       G   +A++  +++  K
Sbjct: 707 FDLHVYTSLVSGFSQCGELHQARKFFNEMIEK 738



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 214/453 (47%), Gaps = 1/453 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L +  +E G  +EA   F+ +      P   +   LL  L+       +    + +   G
Sbjct: 225 LFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAG 284

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P    +N +I+   + G++E +   F +M+E GL+P   TYN+LI GYG  G  EE  
Sbjct: 285 IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVA 344

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L + M   G V P++ TYN L+  +C  + +  A+    +M  +G+KP+VVTY+T+  A
Sbjct: 345 SLFNEMKDVGCV-PDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDA 403

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G    A ++ V+M   G+ PN  T   +I   CK G + EA +    M + GV  N
Sbjct: 404 FCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLN 463

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +  L+ G  +       +EV   M +  ++P+   Y+ +++ +  A  M+   +I  
Sbjct: 464 IVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILK 523

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M +  IKPD   Y  +  G+  +++ E+ + +L  M   G   N VI TTII  +   G
Sbjct: 524 QMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAG 583

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
               A+  F +M + GV   + T+  L+ G  +A     A +    M + G+ P  + + 
Sbjct: 584 KSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYT 643

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNEMEA 530
            L +        + AK++  +++ +  T ++ A
Sbjct: 644 SLIDGLCKNNCIESAKKLFDEMQCRGMTPDITA 676



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 96/377 (25%), Positives = 191/377 (50%), Gaps = 1/377 (0%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           F+ + + F E G +EEA + F +M+     P   + N L+     +G  +   K  + M 
Sbjct: 222 FDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMI 281

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
             G + P++ TYNV++   C E ++  +  +  +M   G+ PDVVTYN++   Y + G  
Sbjct: 282 GAG-IAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           ++   +  EM+  G  P+  T   +I+ YCK  K+  A  +   MK  G+ PN+V ++ L
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I  F +     G  ++   M+   + P+  TY+++++A   AG + +  ++ +DM +AG+
Sbjct: 401 IDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGV 460

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           K +   Y+ L  G  +     +AEE+  +M++ G  PN  ++T ++ G+     M+ A++
Sbjct: 461 KLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMK 520

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           +  +M E  + P+L  + +++WG+   R+    + IL+ MK+ G+         + +A  
Sbjct: 521 ILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYF 580

Query: 505 ATGLTKEAKRILSKIKN 521
             G + +A     ++++
Sbjct: 581 KAGKSSDALNFFQEMQD 597



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/454 (23%), Positives = 211/454 (46%), Gaps = 38/454 (8%)

Query: 80  NSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           NSLI+     G  +E  ++FN + + G  P ++TY  L+      ++        S+++ 
Sbjct: 328 NSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKN 387

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           NG+ P+ + ++ +I+AF + G M+ A+  F  M+ +GL P   TY +LI     AG   E
Sbjct: 388 NGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTE 447

Query: 196 SVKLLDLMSREG----------------------------------NVKPNLRTYNVLVR 221
           + KLL+ M + G                                   + PN + Y  LV 
Sbjct: 448 AWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVH 507

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
            +   + + +A  ++ +M    +KPD++ Y +I   +    + ++ + ++ EM+  G+  
Sbjct: 508 GYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISA 567

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N      II  Y K GK  +AL F + M++ GV   +V + +LI G  +    +   +  
Sbjct: 568 NPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYF 627

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M    + P+V  Y+++++       ++  K++FD+M   G+ PD  A++ L  G ++ 
Sbjct: 628 CRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKH 687

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
              ++A  L+  M E     ++ ++T+++SG+   G + +A + F++M E G+ P     
Sbjct: 688 GNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLC 747

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
             L+  Y +  Q   A E+   M+  G+  + +T
Sbjct: 748 ICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 190/383 (49%), Gaps = 1/383 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+++  + G  Q A  +F ++   G  P+  TYT+L+ A            +++
Sbjct: 394 VVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLN 453

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G+  + + + A+++   ++G M EA + F  M + G++P    Y  L+ GY  A 
Sbjct: 454 DMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAE 513

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E+++K+L  M+ E N+KP+L  Y  ++   C+++ + E   ++ +M + G+  + V  
Sbjct: 514 RMEDAMKILKQMT-ECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVIS 572

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            TI  AY + G++  A     EM+  GV+    T  ++I G CK G ++ A+ +   M  
Sbjct: 573 TTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLS 632

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN+ ++  LI G  +    +   ++   M+   + PD+  ++ +++     G + +
Sbjct: 633 LGLQPNVAVYTSLIDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQE 692

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +   M +  I+ D H Y+ L  G+ +  E  +A +    MIE G  P  V+   ++ 
Sbjct: 693 ALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 752

Query: 432 GWCSDGSMDRAIEVFDKMCEHGV 454
            +   G +D AIE+ ++M   G+
Sbjct: 753 EYYKRGQLDEAIELKNEMERMGL 775



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/201 (25%), Positives = 102/201 (50%)

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           +F++L   FVE+   +  +E  + M+ FR  P   + + +++  S +G     ++ F+DM
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
             AGI P    Y+++     +E + E +  L + M E G  P+VV + ++I G+   GS+
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           +    +F++M + G  P++ T+  L+  Y +  +  RA E    MK  G+ P   T+  L
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400

Query: 500 AEARRATGLTKEAKRILSKIK 520
            +A    G+ + A ++   ++
Sbjct: 401 IDAFCKEGMMQGAIKLFVDMR 421



 Score = 62.4 bits (150), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 83/180 (46%), Gaps = 1/180 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L++ L + G  + A   F  ++  G +P++  YT+L+  L       S   + 
Sbjct: 603 TIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCKNNCIESAKKLF 662

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++  GM PD   F A+I+   + GN++EA+    +M E  +      Y +L+ G+   
Sbjct: 663 DEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQC 722

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+  ++ K  + M  +G + P       L+R +     + EA  + ++M   G+  +  T
Sbjct: 723 GELHQARKFFNEMIEKG-ILPEEVLCICLLREYYKRGQLDEAIELKNEMERMGLITESAT 781


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 219/442 (49%), Gaps = 4/442 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L++ L++ G       ++ +L+  G  P+LVT+  L+       +       + 
Sbjct: 27  VHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFLR 86

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++E  + PD   FN +I+   + GN ++A+  F  M+ S + P   TYNT+I G   +G
Sbjct: 87  ALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKSG 146

Query: 192 KPEESVKLLDLMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
             E++ +LL+ M R+G    P++ TYN L+ A+     I EA     KM A+G+ PDV+T
Sbjct: 147 NLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLT 206

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            N + +   ++G+ ++A E++  M+  G  P+  T   II   C  GK+ EA    +TM 
Sbjct: 207 CNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS 266

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                P+LV FN L+ GF +        EVL  M    + PDVITY+ ++N     G + 
Sbjct: 267 ---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQ 323

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               + +++ + G  PD  AY+ L  G  +  E E+A +L+  M   G    VV++++++
Sbjct: 324 VAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLV 383

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           SG+C  G++ +A E+  +M    + P L T+  ++ G  +     +A  ++  + A G  
Sbjct: 384 SGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYV 443

Query: 491 PQKSTFLLLAEARRATGLTKEA 512
           P   T+  L +        +EA
Sbjct: 444 PDVVTYNTLIDGLCKANRVREA 465



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 207/422 (49%), Gaps = 6/422 (1%)

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNME 159
           + G+K  + +Y  LL  L           +   +  +G  P+ + F  +I    ++G   
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAM 79

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
            A++    + E  + P    +N LI G    G P+++VKL + M     VKP + TYN +
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENM-ESSRVKPEIVTYNTV 138

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMK--PDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +   C   N+ +A  ++ +M   G K  PD+VTYNT+  A+ +     +A     +M+  
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAA 198

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G+ P+  TC I++SG CK+G ++EAL     MK  G  P+++ +N +I           V
Sbjct: 199 GINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCV---AGKV 255

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E   ++K    +PD++T++T+++ +  AG + +  E+ ++M +  I PD   Y+IL  G
Sbjct: 256 VEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNG 315

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             R  + + A  LL  ++  G+ P+V+ +T+++ G C  G ++ A ++  +M   G    
Sbjct: 316 LCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTG 375

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           +  + +L+ GY  A    +A EIL  M +  + P   T+ ++       G   +A  ++S
Sbjct: 376 VVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLIS 435

Query: 518 KI 519
            +
Sbjct: 436 DL 437



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/457 (24%), Positives = 212/457 (46%), Gaps = 20/457 (4%)

Query: 35  KKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAI 94
           K  NP +  +L+ N + +  +P+              + +   +++ L + G  ++A+ +
Sbjct: 109 KDGNPDQAVKLFENMESSRVKPE--------------IVTYNTVISGLCKSGNLEKAREL 154

Query: 95  FNNLIEGGHK--PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAF 152
              +I  G K  P +VTY TL+ A     R     +   +++  G++PD +  N +++  
Sbjct: 155 LEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGI 214

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
            + G++EEA++    MK +G  P   TYN++I    +AGK  E+ ++L  MS      P+
Sbjct: 215 CKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS----CSPD 270

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
           L T+N L+  +C    +  A  V+ +M    + PDV+TY  +     + G+   A  ++ 
Sbjct: 271 LVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLE 330

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           E+   G  P+      ++ G CK G+I+EA +  + M   G    +V+++ L+ G+    
Sbjct: 331 EIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAG 390

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           +     E+LA M    + P + TY+ ++      G + K   +  D+   G  PD   Y+
Sbjct: 391 NVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYN 450

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            L  G  +     +A +L   M   G  PN V   +++ G C  G +D A  +  +M   
Sbjct: 451 TLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRK 510

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             +PN+  + +L+ G  ++ +   A  +L  M+  GV
Sbjct: 511 RHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGV 547



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 160/332 (48%), Gaps = 5/332 (1%)

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           + +P+ +++  D    +   K ++ +YN L+       +      V   +  SG  P++V
Sbjct: 4   SSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLV 63

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           T+  +     + G+A +A E +  ++   V P+     ++I G  K+G   +A++    M
Sbjct: 64  TFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENM 123

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM--KEFRVNPDVITYSTIMNAWSTAG 367
           +   V P +V +N +I G  +  + +   E+L  M  K  +  PD++TY+T++NA+  A 
Sbjct: 124 ESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRAS 183

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            + +     + M  AGI PD    +IL  G  ++ + E+A E+L  M  +G  P+V+ + 
Sbjct: 184 RIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYN 243

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +II   C  G +  A E+   M     SP+L TF TL+ G+ +A    RA E+L+ M   
Sbjct: 244 SIIHALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRE 300

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + P   T+ +L       G  + A  +L +I
Sbjct: 301 NILPDVITYTILVNGLCRVGQVQVAFYLLEEI 332



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 85/380 (22%), Positives = 159/380 (41%), Gaps = 39/380 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ + + G  +EA  I + +   G  P ++TY +++ AL +  +      I+  +    
Sbjct: 210 LVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS--- 266

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + FN +++ F ++G +  A++   +M    + P   TY  L+ G    G+ + + 
Sbjct: 267 CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAF 326

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ + R+G + P++  Y  LV   C    I EA  ++ +M+  G +  VV Y+++ + 
Sbjct: 327 YLLEEIVRQGYI-PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSG 385

Query: 258 YAQNGEADQAEEVIVEMEH-----------------------------------NGVQPN 282
           Y + G   +A E++ EM                                      G  P+
Sbjct: 386 YCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPD 445

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   +I G CK  +++EA   A  M   G  PN V    ++ G   +   D    ++ 
Sbjct: 446 VVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVV 505

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M   R  P+V+ Y+++++    +  MD    + D M   G+  D  AY  L        
Sbjct: 506 EMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGG 565

Query: 403 EPEKAEELLMTMIESGFHPN 422
              +A  +   M+  GF P+
Sbjct: 566 RVAEAMAMYDEMVARGFLPD 585



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 144/315 (45%), Gaps = 1/315 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L++   + G    A  +   +      P ++TYT L+  L    +      ++ ++
Sbjct: 273 TFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 332

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  PD I + ++++   +SG +EEA     +M   G       Y++L+ GY  AG  
Sbjct: 333 VRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNV 392

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ ++L  M    N+ P L TYN+++     + +I++A +++  + A G  PDVVTYNT
Sbjct: 393 HKAREILAEMV-SINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNT 451

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     +     +A ++  EM   G  PN  T G ++ G C+ G++ +A      M    
Sbjct: 452 LIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKR 511

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             PN+V++  LI G  +    D    VL  M+   V  D   Y  ++ + S  G + +  
Sbjct: 512 HAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAM 571

Query: 374 EIFDDMGKAGIKPDA 388
            ++D+M   G  PD 
Sbjct: 572 AMYDEMVARGFLPDG 586



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 88/173 (50%), Gaps = 2/173 (1%)

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
           +P+++T+  ++     AG   +  E    + +  + PD + +++L  G  ++  P++A +
Sbjct: 59  SPNLVTFKILIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVK 118

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG--VSPNLKTFETLMWG 467
           L   M  S   P +V + T+ISG C  G++++A E+ ++M   G   +P++ T+ TL+  
Sbjct: 119 LFENMESSRVKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINA 178

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  A +   A    + MKA G++P   T  +L       G  +EA  IL  +K
Sbjct: 179 FYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMK 231



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 1/154 (0%)

Query: 370 DKCKEIFDDMG-KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           D   + FD  G + G K D H+Y+ L    V+     +  ++   ++ SG  PN+V F  
Sbjct: 8   DLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKI 67

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G C  G   RA+E    + E  V+P++  F  L+ G  +   P +A ++ + M++  
Sbjct: 68  LIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSR 127

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           V P+  T+  +      +G  ++A+ +L ++  K
Sbjct: 128 VKPEIVTYNTVISGLCKSGNLEKARELLEEMIRK 161


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 220/450 (48%), Gaps = 6/450 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   ++G  + A  +F  L   G  P++ TY  ++     +  F +I  ++ ++   G
Sbjct: 245 LIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRG 304

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  +   +N +I+A  + G++ +A++T   M E G  P   TYNTLI G    GK  E+ 
Sbjct: 305 LTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEAD 364

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL+    +G + PN  +Y  L+ A+C +     A N + +M   G KPD+VTY  +   
Sbjct: 365 QLLEQALGKG-LMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHG 423

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               GE D A  +  +M   GV P+     I++SG CK+ K+  A      M +  V P+
Sbjct: 424 LVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPD 483

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             ++  L+ GF+   + D   ++  L  E  +NP ++ Y+ ++  +   G M       +
Sbjct: 484 AFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACIN 543

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M K  + PD   YS +  GYV++ + + A+++   M++    PNVV +T++I+G+C  G
Sbjct: 544 RMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKG 603

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            + R++++F +M   G+ PN+ T+  L+  + +  +   A    + M      P   TF 
Sbjct: 604 DLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFN 663

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNE 527
            L       G +K   R +S+  N+ + N+
Sbjct: 664 YL-----VNGFSKNGTRAISEKGNEFQENK 688



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 209/429 (48%), Gaps = 5/429 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIE--GGHKPSLVTYTT--LLAALTIQKRFNSIH 127
           V +   L+N L++ G+ + A+ +++ ++E  G     +  Y+T  ++  L  + +     
Sbjct: 165 VIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGR 224

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            ++      G  P+ IF+N +I+ + + G+ME A   F ++K  G  PT  TY  +I G+
Sbjct: 225 KLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGF 284

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G  +   +LL  M+  G +  N++ YN ++ A     +I +A   +  M   G KPD
Sbjct: 285 CKKGDFKAIDRLLMEMNSRG-LTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPD 343

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           +VTYNT+ +   ++G+  +A++++ +    G+ PN  +   +I  YCK+G    A  +  
Sbjct: 344 IVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLI 403

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M E G  P+LV +  L+ G V   + D    +   M E  V PD   Y+ +M+      
Sbjct: 404 EMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKF 463

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +   K +  +M    + PDA  Y+ L  G++R    ++A +L    IE G +P +V + 
Sbjct: 464 KLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYN 523

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +I G+C  G M  A+   ++M +  ++P+  T+ T++ GY +      A+++ + M   
Sbjct: 524 AMIKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKM 583

Query: 488 GVHPQKSTF 496
              P   T+
Sbjct: 584 KCKPNVVTY 592



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/462 (24%), Positives = 214/462 (46%), Gaps = 19/462 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V+    ++++  + G   +A      +IE G KP +VTY TL++      + +    ++ 
Sbjct: 309 VQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLE 368

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q    G+ P+   +  +I+A+ + G  + A +   +M E G  P   TY  L+ G  +AG
Sbjct: 369 QALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAG 428

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + ++ + + M   G V P+   YN+L+   C +  +  A  ++ +M    + PD   Y
Sbjct: 429 EVDVALTIREKMLERG-VFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVY 487

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   + +NG  D+A ++       G+ P       +I GYCK G +K+A+     MK+
Sbjct: 488 ATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKK 547

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             + P+   ++ +I G+V+  D DG  ++   M + +  P+V+TY++++N +   G + +
Sbjct: 548 RHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLINGFCRKGDLHR 607

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             +IF +M   G+ P+   YSIL   + +E +   A      M+ +   PN V F  +++
Sbjct: 608 SLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCVPNDVTFNYLVN 667

Query: 432 GWCSDGSMDRAIE----------------VFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           G+  +G+  RAI                  F +M   G +P    + +++    +     
Sbjct: 668 GFSKNGT--RAISEKGNEFQENKQSMFLNFFGRMISDGWAPRSAAYNSILICLCQYGMFR 725

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
            A ++   M + G  P   +F+ L       G +KE K I+S
Sbjct: 726 TALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNIVS 767



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 99/411 (24%), Positives = 193/411 (46%), Gaps = 4/411 (0%)

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW-KM 168
           Y++LL  L   + F+ +  ++  +    M P     + VI A+S+SG +E+A++ ++  +
Sbjct: 97  YSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVL 156

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD-LMSREGNVKPNLRTYN--VLVRAWCN 225
           K     P     N+L+      G+ E + KL D ++  +G     +  Y+  ++V+  C 
Sbjct: 157 KTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCK 216

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
           E  + E   ++      G  P+++ YNT+   Y + G+ + A  + +E++  G  P   T
Sbjct: 217 EGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVET 276

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
            G II+G+CK+G  K   R    M   G+  N+ ++N +I    +        E +  M 
Sbjct: 277 YGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMI 336

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           E    PD++TY+T+++     G + +  ++ +     G+ P+  +Y+ L   Y ++   +
Sbjct: 337 ECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYD 396

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +A   L+ M E G  P++V +  ++ G    G +D A+ + +KM E GV P+   +  LM
Sbjct: 397 RASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILM 456

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
            G  +  +   A+ +L  M    V P    +  L +     G   EA+++ 
Sbjct: 457 SGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLF 507



 Score = 39.3 bits (90), Expect = 6.1,   Method: Compositional matrix adjust.
 Identities = 43/200 (21%), Positives = 86/200 (43%), Gaps = 5/200 (2%)

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK-PDAHAYSILAKGY 398
           VL  M+   ++P     S ++ A+S +G ++K  E++  + K     PD  A + L    
Sbjct: 116 VLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNSLLNML 175

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVI--FTT--IISGWCSDGSMDRAIEVFDKMCEHGV 454
           V+    E A +L   M+E     +  +  ++T  ++ G C +G ++   ++ +     G 
Sbjct: 176 VKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGC 235

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            PN+  + TL+ GY +      A  +   +K  G  P   T+  +       G  K   R
Sbjct: 236 IPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDR 295

Query: 515 ILSKIKNKERTNEMEAEEDI 534
           +L ++ ++  T  ++    I
Sbjct: 296 LLMEMNSRGLTVNVQVYNTI 315


>gi|356564530|ref|XP_003550506.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g11690-like [Glycine max]
          Length = 556

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 230/472 (48%), Gaps = 38/472 (8%)

Query: 68  SCRTVRSM-TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS- 125
           SC T   +   ++N+ +      +A    +++I  GH P   T+  LL  L     F+  
Sbjct: 84  SCSTYTPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIRSNYFDKA 143

Query: 126 ---------------------------------IHSIMSQVEENGMDPDSIFFNAVINAF 152
                                            +  +++ +EE G+ P+ + +  +I+  
Sbjct: 144 WWIFNVLKSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVVIYTTLIDGC 203

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
            ++G++  A + F KM   GL P   TY+ L+ G+   G   E  ++ + M+R G + PN
Sbjct: 204 CKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENMNRSG-IVPN 262

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
              YN L+  +CN+  + +A+ V  +M   G+   V+TYN +     +  +  +A +++ 
Sbjct: 263 AYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVH 322

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           ++   G+ PN  T  I+I+G+C  GK+  A+R    +K  G+ P LV +N LI G+ ++ 
Sbjct: 323 KVNKVGLSPNIVTYNILINGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVE 382

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           +  G  +++  M+E  +    +TY+ +++A++   + DK  E+   M K+G+ PD + YS
Sbjct: 383 NLAGALDLVKEMEERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYS 442

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           +L  G       ++A +   ++ E    PN VI+ T+I G+C +GS  RA+ + ++M   
Sbjct: 443 VLIHGXCVNGNMKEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHS 502

Query: 453 GVSPNLKTFETLMWGYSEARQPWR-AEEILQIMKAFGVHPQKSTFLLLAEAR 503
           G+ PN+ +F + M G     + W+ AE +L  M   G+ P  S + ++ + +
Sbjct: 503 GMVPNVASFCSTM-GLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVK 553



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/443 (22%), Positives = 201/443 (45%), Gaps = 56/443 (12%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
            T  S++ ++N L+  G   +AQ++   LI G    SL+   T       Q  F S  + 
Sbjct: 36  HTSHSISFILNHLLSSGMLPQAQSLILRLISGRIPSSLMLQLT-------QAHFTSCSTY 88

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
                       +  ++A++NA+  S + ++A+     M   G  P ++T+N L+     
Sbjct: 89  ------------TPLYDAIVNAYVHSHSTDQALTFLHHMIHEGHAPLSNTFNNLLCLLIR 136

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +   +++  + +++  +  V  N  ++ +++   C        + ++  +   G+ P+VV
Sbjct: 137 SNYFDKAWWIFNVL--KSKVVLNAYSFGIMITGCCEAGYFVRVFRLLAVLEEFGLSPNVV 194

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y T+     +NG+   A+ +  +M+  G+ PN  T  ++++G+ K+G  +E  +    M
Sbjct: 195 IYTTLIDGCCKNGDVMLAKNLFCKMDRLGLVPNQHTYSVLMNGFFKQGLQREGFQMYENM 254

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G+ PN   +N LI  +      DG+                               +
Sbjct: 255 NRSGIVPNAYAYNCLISEYCN----DGM-------------------------------V 279

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           DK  ++F +M + GI      Y+IL  G  R ++  +A +L+  + + G  PN+V +  +
Sbjct: 280 DKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNIL 339

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I+G+C  G MD A+ +F+++   G+SP L T+ TL+ GYS+      A ++++ M+   +
Sbjct: 340 INGFCDVGKMDTAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCI 399

Query: 490 HPQKSTFLLLAEARRATGLTKEA 512
              K T+ +L +A      T +A
Sbjct: 400 ARSKVTYTILIDAFARLNYTDKA 422



 Score = 40.4 bits (93), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 31/156 (19%), Positives = 71/156 (45%), Gaps = 3/156 (1%)

Query: 66  KESC--RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +E C  R+  + T L+++        +A  + + + + G  P + TY+ L+    +    
Sbjct: 395 EERCIARSKVTYTILIDAFARLNYTDKACEMHSLMEKSGLVPDVYTYSVLIHGXCVNGNM 454

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                    + E  + P+S+ +N +I+ + + G+   A+    +M  SG+ P  +++ + 
Sbjct: 455 KEASKPFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVHSGMVPNVASFCST 514

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           +       K +E+  LL  M   G +KP++  Y ++
Sbjct: 515 MGLLCRDEKWKEAELLLGQMINSG-LKPSVSLYKMV 549


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 210/419 (50%), Gaps = 1/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+   +  G  Q++  IF  +   G  PS+ T   +L ++       S+ S + ++ +  
Sbjct: 169 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 228

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   FN +IN     G+ E++     KM++SG  PT  TYNT++  Y   G+ + ++
Sbjct: 229 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 288

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LLD M  +G V  ++ TYN+L+   C    I + + ++  M    + P+ VTYNT+   
Sbjct: 289 ELLDHMKSKG-VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 347

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           ++  G+   A +++ EM   G+ PN  T   +I G+  EG  KEAL+    M+  G+ P+
Sbjct: 348 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 407

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V + +L+ G  +  + D        MK   V    ITY+ +++     GF+D+   + +
Sbjct: 408 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 467

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K GI PD   YS L  G+ +    + A+E++  +   G  PN +I++T+I   C  G
Sbjct: 468 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 527

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            +  AI +++ M   G + +  TF  L+    +A +   AEE ++ M + G+ P   +F
Sbjct: 528 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 586



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 203/423 (47%), Gaps = 1/423 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           + ++ C  V +   L+N L   G  +++  +   + + G+ P++VTY T+L     + RF
Sbjct: 225 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 284

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            +   ++  ++  G+D D   +N +I+    S  + +       M++  + P   TYNTL
Sbjct: 285 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 344

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G+   GK   + +LL+ M   G + PN  T+N L+    +E N  EA  + + M A G
Sbjct: 345 INGFSNEGKVLIASQLLNEMLSFG-LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 403

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           + P  V+Y  +     +N E D A    + M+ NGV     T   +I G CK G + EA+
Sbjct: 404 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 463

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M + G+ P++V ++ LI GF ++       E++  +    ++P+ I YST++   
Sbjct: 464 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 523

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G + +   I++ M   G   D   +++L     +  +  +AEE +  M   G  PN 
Sbjct: 524 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 583

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           V F  +I+G+ + G   +A  VFD+M + G  P   T+ +L+ G  +      AE+ L+ 
Sbjct: 584 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 643

Query: 484 MKA 486
           + A
Sbjct: 644 LHA 646



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 178/363 (49%), Gaps = 1/363 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P+ VTY TL+   + + +      +++++   G+ P+ + FNA+I+     GN +EA+  
Sbjct: 336 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 395

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F+ M+  GLTP+  +Y  L+ G     + + +      M R G     + TY  ++   C
Sbjct: 396 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI-TYTGMIDGLC 454

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
               + EA  ++++M+  G+ PD+VTY+ +   + + G    A+E++  +   G+ PNG 
Sbjct: 455 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 514

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
               +I   C+ G +KEA+R    M   G   +   FN+L+    +       +E +  M
Sbjct: 515 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 574

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
               + P+ +++  ++N +  +G   K   +FD+M K G  P    Y  L KG  +    
Sbjct: 575 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 634

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            +AE+ L ++       + V++ T+++  C  G++ +A+ +F +M +  + P+  T+ +L
Sbjct: 635 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 694

Query: 465 MWG 467
           + G
Sbjct: 695 ISG 697



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 103/456 (22%), Positives = 202/456 (44%), Gaps = 37/456 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +++ L + G   EA  + N + + G  P +VTY+ L+       RF +   I+ ++  
Sbjct: 447 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 506

Query: 136 NGMDPDSIF-----------------------------------FNAVINAFSESGNMEE 160
            G+ P+ I                                    FN ++ +  ++G + E
Sbjct: 507 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 566

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A +    M   G+ P T +++ LI GYG +G+  ++  + D M++ G+  P   TY  L+
Sbjct: 567 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH-HPTFFTYGSLL 625

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           +  C   ++ EA   +  + A     D V YNT+ TA  ++G   +A  +  EM    + 
Sbjct: 626 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 685

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYG-VHPNLVIFNLLIKGFVEIMDRDGVDE 339
           P+  T   +ISG C++GK   A+ FA+  +  G V PN V++   + G  +         
Sbjct: 686 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 745

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
               M      PD++T + +++ +S  G ++K  ++  +MG     P+   Y+IL  GY 
Sbjct: 746 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 805

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           + ++   +  L  ++I +G  P+ +   +++ G C    ++  +++       GV  +  
Sbjct: 806 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 865

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           TF  L+       +   A +++++M + G+   K T
Sbjct: 866 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 901



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 106/500 (21%), Positives = 203/500 (40%), Gaps = 84/500 (16%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-------IQKRFNSI 126
            S   L+N     G+  +A ++F+ + + GH P+  TY +LL  L         +K   S+
Sbjct: 585  SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 644

Query: 127  HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
            H++ + V       D++ +N ++ A  +SGN+ +A+  F +M +  + P + TY +LI G
Sbjct: 645  HAVPAAV-------DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697

Query: 187  YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
                GK   ++         GNV PN   Y   V                 +M   G  P
Sbjct: 698  LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 757

Query: 247  DVVTYNTIATAYAQNGEADQAEEVIVEMEH------------------------------ 276
            D+VT N +   Y++ G+ ++  +++ EM +                              
Sbjct: 758  DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817

Query: 277  -----NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK----- 326
                 NG+ P+  TC  ++ G C+   ++  L+  +     GV  +   FN+LI      
Sbjct: 818  RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 877

Query: 327  -------GFVEIM-------DRDGVDEVLALM------KEFR----------VNPDVITY 356
                     V++M       D+D  D +++++      +E R          ++P+   Y
Sbjct: 878  GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 937

Query: 357  STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
              ++N     G +     + ++M    I P   A S + +   +  + ++A  LL  M++
Sbjct: 938  IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 997

Query: 417  SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
                P +  FTT++   C +G++  A+E+   M   G+  +L ++  L+ G         
Sbjct: 998  MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1057

Query: 477  AEEILQIMKAFGVHPQKSTF 496
            A E+ + MK  G     +T+
Sbjct: 1058 AFELYEEMKGDGFLANATTY 1077



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 92/442 (20%), Positives = 190/442 (42%), Gaps = 41/442 (9%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM--SQVEE 135
            L+ ++ + G   +A ++F  +++    P   TYT+L++ L   ++  ++ +I+   + E 
Sbjct: 659  LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC--RKGKTVIAILFAKEAEA 716

Query: 136  NG-MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G + P+ + +   ++   ++G  +  +    +M   G TP   T N +I GY   GK E
Sbjct: 717  RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 776

Query: 195  ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT---- 250
            ++  LL  M  + N  PNL TYN+L+  +   K+++ ++ +   +  +G+ PD +T    
Sbjct: 777  KTNDLLPEMGNQ-NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 835

Query: 251  -------------------------------YNTIATAYAQNGEADQAEEVIVEMEHNGV 279
                                           +N + +    NGE + A +++  M   G+
Sbjct: 836  VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 895

Query: 280  QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
              +  TC  ++S   +  + +E+      M + G+ P    +  LI G   + D      
Sbjct: 896  SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 955

Query: 340  VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
            V   M   ++ P  +  S ++ A +  G  D+   +   M K  + P   +++ L     
Sbjct: 956  VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCC 1015

Query: 400  REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
            +     +A EL + M   G   ++V +  +I+G C+ G M  A E++++M   G   N  
Sbjct: 1016 KNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANAT 1075

Query: 460  TFETLMWGYSEARQPWRAEEIL 481
            T++ L+ G       +   +I+
Sbjct: 1076 TYKALIRGLLARETAFSGADII 1097



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 145/318 (45%)

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
           LM+       N   Y++L+R +  E  I ++  +   M   G  P V T N I  +  ++
Sbjct: 152 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS 211

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           GE       + EM    + P+  T  I+I+  C EG  +++    + M++ G  P +V +
Sbjct: 212 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 271

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N ++  + +        E+L  MK   V+ DV TY+ +++    +  + K   +  DM K
Sbjct: 272 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 331

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
             I P+   Y+ L  G+  E +   A +LL  M+  G  PN V F  +I G  S+G+   
Sbjct: 332 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 391

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A+++F  M   G++P+  ++  L+ G  +  +   A      MK  GV   + T+  + +
Sbjct: 392 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 451

Query: 502 ARRATGLTKEAKRILSKI 519
                G   EA  +L+++
Sbjct: 452 GLCKNGFLDEAVVLLNEM 469



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 111/238 (46%)

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           I+I  Y +EG I+++L   R M  YG +P++   N ++   V+  +   V   L  M + 
Sbjct: 168 ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR 227

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
           ++ PDV T++ ++N     G  +K   +   M K+G  P    Y+ +   Y ++   + A
Sbjct: 228 KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 287

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            ELL  M   G   +V  +  +I   C    + +   +   M +  + PN  T+ TL+ G
Sbjct: 288 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 347

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
           +S   +   A ++L  M +FG+ P   TF  L +   + G  KEA ++   ++ K  T
Sbjct: 348 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 6/173 (3%)

Query: 342 ALMKEFRV---NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           ALM  +R+   NP V  Y  ++  +   G +    EIF  MG  G  P  +  + +    
Sbjct: 151 ALMTTYRLCNSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 208

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           V+  E       L  M++    P+V  F  +I+  C++GS +++  +  KM + G +P +
Sbjct: 209 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 268

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-LLLAEARRATGLTK 510
            T+ T++  Y +  +   A E+L  MK+ GV     T+ +L+ +  R+  + K
Sbjct: 269 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 321



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 43/210 (20%), Positives = 97/210 (46%), Gaps = 7/210 (3%)

Query: 64   MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
            ++K++C    +M  ++N      + QE++ + + + + G  P    Y  L+  L      
Sbjct: 897  LDKDTCD---AMVSVLN---RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDI 950

Query: 124  NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
             +   +  ++  + + P ++  +A++ A ++ G  +EA      M +  L PT +++ TL
Sbjct: 951  KTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 1010

Query: 184  IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
            +      G   E+++L  +MS  G +K +L +YNVL+   C + ++  A+ +  +M   G
Sbjct: 1011 MHLCCKNGNVIEALELRVVMSNCG-LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDG 1069

Query: 244  MKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
               +  TY  +         A    ++I++
Sbjct: 1070 FLANATTYKALIRGLLARETAFSGADIILK 1099


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 225/478 (47%), Gaps = 36/478 (7%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R+V +   +++ L + G  + A+++F  + E G  P +VTY +L+         +    I
Sbjct: 253 RSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICI 312

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             Q+++   DPD I +NA+IN F +   M +A +   +MK +GL P   TY+T I  +  
Sbjct: 313 FEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCK 372

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G  +E++K    M R   + PN  TY  L+ A C   N+ EA  ++ ++  +G+K +VV
Sbjct: 373 EGMLQEAIKFFVDMRRVA-LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVV 431

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +     + G   +AEEV   M + GV PN  T   ++ G+ K  +++ A    + M
Sbjct: 432 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 491

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW------ 363
           KE  + P+L+++  ++ G       +    ++  +KE  +N + + Y+T+M+A+      
Sbjct: 492 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 551

Query: 364 -----------------------------STAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
                                          +G + +    F  M + G++P+   Y+ L
Sbjct: 552 TEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTAL 611

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G  +    E A++L   M++ G  P+ + +T +I G    G++  A+ + D+M E G+
Sbjct: 612 VDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGM 671

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
             +L  +  L+WG S + Q  +A  +L  M   GV P +  ++ L +   A G   EA
Sbjct: 672 ELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEA 729



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 217/445 (48%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L ++LIE G  +EA   F  + +    P   +   LL  L+   R +        +   G
Sbjct: 191 LFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAG 250

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +      +N +I+   + G++E A   F +MKE+G TP   TYN+LI G+G  G  +E +
Sbjct: 251 IKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECI 310

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            + + M ++ +  P++ TYN L+  +C  + + +A+  +H+M A+G+KP+VVTY+T   A
Sbjct: 311 CIFEQM-KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDA 369

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G   +A +  V+M    + PN  T   +I   CK G + EAL+    + + G+  N
Sbjct: 370 FCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLN 429

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +  L+ G  E       +EV   M    V P+  TY+ +++ +  A  M+  K+I  
Sbjct: 430 VVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILK 489

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M +  IKPD   Y  +  G   E   E+A+ L+  + ESG + N VI+TT++  +   G
Sbjct: 490 EMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSG 549

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
               A+ + ++M + G+     T+  L+ G  ++     A      M   G+ P  + + 
Sbjct: 550 QATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYT 609

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L +        + AK++  ++ +K
Sbjct: 610 ALVDGLCKNNCFEVAKKLFDEMLDK 634



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 224/462 (48%), Gaps = 7/462 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           RS   L++ L + G+   ++  F ++   G K S+ TY  ++  L  +       S+ +Q
Sbjct: 221 RSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDLEMARSLFTQ 280

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           ++E G  PD + +N++I+   + G ++E +  F +MK++   P   TYN LI  +    +
Sbjct: 281 MKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNALINCFCKFER 340

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             ++ + L  M   G +KPN+ TY+  + A+C E  + EA      M    + P+  TY 
Sbjct: 341 MPKAFEFLHEMKANG-LKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYT 399

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++  A  + G   +A +++ E+   G++ N  T   ++ G C+EG++KEA    R M   
Sbjct: 400 SLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNA 459

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           GV PN   +  L+ GF++  + +   ++L  MKE  + PD++ Y TI+        +++ 
Sbjct: 460 GVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEA 519

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           K +  ++ ++GI  +A  Y+ L   Y +  +  +A  LL  M++ G     V +  +I G
Sbjct: 520 KLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDG 579

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G +  A+  F +M E G+ PN+  +  L+ G  +      A+++   M   G+ P 
Sbjct: 580 LCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPD 639

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI 534
           K  +  L +     G  +EA  +      ++R  E+  E D+
Sbjct: 640 KIAYTALIDGNMKHGNLQEALNL------RDRMIEIGMELDL 675



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 198/406 (48%), Gaps = 42/406 (10%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           F+A+ +A  E G +EEA + F KM++  + P   + N L+      G+ + S K    M 
Sbjct: 188 FDALFSALIELGMLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMG 247

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
             G +K ++ TYN+++   C E ++  A ++  +M  +G  PD+VTYN++   + + G  
Sbjct: 248 AAG-IKRSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLL 306

Query: 265 DQ-----------------------------------AEEVIVEMEHNGVQPNGRTCGII 289
           D+                                   A E + EM+ NG++PN  T    
Sbjct: 307 DECICIFEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTF 366

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR- 348
           I  +CKEG ++EA++F   M+   + PN   +  LI    +      + E L L++E   
Sbjct: 367 IDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCK---AGNLAEALKLVEEILQ 423

Query: 349 --VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             +  +V+TY+ +++     G M + +E+F  M  AG+ P+   Y+ L  G+++ +E E 
Sbjct: 424 AGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEY 483

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A+++L  M E    P+++++ TI+ G C++  ++ A  +  ++ E G++ N   + TLM 
Sbjct: 484 AKDILKEMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMD 543

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            Y ++ Q   A  +L+ M   G+   + T+  L +    +GL +EA
Sbjct: 544 AYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEA 589



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 101/387 (26%), Positives = 194/387 (50%), Gaps = 1/387 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + +  +++  + G  QEA   F ++      P+  TYT+L+ A            ++ 
Sbjct: 360 VVTYSTFIDAFCKEGMLQEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVE 419

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G+  + + + A+++   E G M+EA + F  M  +G+ P   TY  L+ G+  A 
Sbjct: 420 EILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAK 479

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E +  +L  M +E  +KP+L  Y  ++   CNE  + EA  ++ ++  SG+  + V Y
Sbjct: 480 EMEYAKDILKEM-KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIY 538

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+  AY ++G+A +A  ++ EM   G+     T   +I G CK G ++EA+     M E
Sbjct: 539 TTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSE 598

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN+ ++  L+ G  +    +   ++   M +  + PD I Y+ +++     G + +
Sbjct: 599 IGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQE 658

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + D M + G++ D HAY+ L  G     + +KA  LL  MI  G  P+ V++  +I 
Sbjct: 659 ALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIK 718

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            + + G +D A+E+ ++M + G+   L
Sbjct: 719 KYYALGKVDEALELQNEMAKRGMITGL 745



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 156/346 (45%), Gaps = 1/346 (0%)

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNV-KPNLRTYNVLVRAWCNEKNITEAWNVM 236
           S  N ++K      +   S  + DL+    NV  P    ++ L  A      + EA    
Sbjct: 149 SDANAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECF 208

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
            KM    + P   + N +    ++ G  D + +   +M   G++ +  T  I+I   CKE
Sbjct: 209 LKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKE 268

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
           G ++ A      MKE G  P++V +N LI G  ++   D    +   MK+   +PDVITY
Sbjct: 269 GDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITY 328

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           + ++N +     M K  E   +M   G+KP+   YS     + +E   ++A +  + M  
Sbjct: 329 NALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR 388

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
               PN   +T++I   C  G++  A+++ +++ + G+  N+ T+  L+ G  E  +   
Sbjct: 389 VALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKE 448

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           AEE+ + M   GV P + T+  L          + AK IL ++K K
Sbjct: 449 AEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK 494


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 230/495 (46%), Gaps = 17/495 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T  M S     +P  A+ + NN+   G + S V Y T++     +      H +  
Sbjct: 146 VYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFE 205

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD + FN +I+     G+++E+     K+ + G++P   T N  I+G+    
Sbjct: 206 EMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRA 265

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E+++LLD + R   + P++ TYN L+   C    + EA + + KM   G +PD  TY
Sbjct: 266 MLNEAIRLLDGVGR--GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTY 323

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N+I   Y + G    A++++ +    G  P+  T   +I+G C++G I  A+       E
Sbjct: 324 NSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAME 383

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGF 368
            G+ PNLV+ N L+KG  +   +  + + L LM E   N   PD+ TY+ ++N     G 
Sbjct: 384 KGLKPNLVLCNTLVKGLSQ---QGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGC 440

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +     +  D    G  PD   ++ L  GY ++ + + A E++  M   G  P+V+ + +
Sbjct: 441 VSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNS 500

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           I++G C  G  +  +  F  M E G  PN+ T+  L   + +AR+   A  +++ M+  G
Sbjct: 501 ILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKG 560

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESL--------- 539
           + P    F  L +     G    A ++  ++  + + +   A  +I + +          
Sbjct: 561 LTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMA 620

Query: 540 ERLYHKEATTASYPN 554
           E+L++K       P+
Sbjct: 621 EKLFNKMCENGFSPD 635



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 225/455 (49%), Gaps = 2/455 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V+S   +MN L+E     +A  ++  + + G  P + T+T  + +     R ++   ++
Sbjct: 110 SVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLL 169

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + +   G +  ++ +  VI  F E  +  EA + F +M   G+ P    +N LI      
Sbjct: 170 NNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRK 229

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +ES +LL+ + + G V PNL T N+ ++ +C    + EA  ++  +   G+ PDV+T
Sbjct: 230 GHVQESERLLNKVLKRG-VSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG-RGLTPDVIT 287

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+     +N +  +AE  + +M + G +P+G T   II GYCK G ++ A +  R   
Sbjct: 288 YNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGA 347

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  P+   +  LI G  +  D D    V     E  + P+++  +T++   S  G + 
Sbjct: 348 FKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLIL 407

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  ++ ++M + G  PD   Y+++  G  +      A+ L++  I  G  P+V  F T+I
Sbjct: 408 QALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLI 467

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+C    +D AIE+ D+M  HGVSP++ T+ +++ G  +A +        ++M   G  
Sbjct: 468 DGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCV 527

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
           P   T+ +L E+       +EA  ++ +++NK  T
Sbjct: 528 PNIITYNILTESFCKARKVEEALNLIEEMQNKGLT 562



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 218/443 (49%), Gaps = 9/443 (2%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C  + +  KL+++L  +G  QE++ + N +++ G  P+L T    +     +   N    
Sbjct: 213 CPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIR 272

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++  V   G+ PD I +N +I    ++  + EA     KM   G  P   TYN++I GY 
Sbjct: 273 LLDGVGR-GLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYC 331

Query: 189 IAGKPEESVKLLDLMSREGNVK---PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
             G  + + ++L    R+G  K   P+  TY  L+   C + +I  A NV ++    G+K
Sbjct: 332 KLGMMQNADQIL----RDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLK 387

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P++V  NT+    +Q G   QA +++ EM  NG  P+  T  ++I+G CK G + +A   
Sbjct: 388 PNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNL 447

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
                  G  P++  FN LI G+ + +  D   E++  M    V+PDVITY++I+N    
Sbjct: 448 VIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCK 507

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
           AG  +     F  M + G  P+   Y+IL + + + ++ E+A  L+  M   G  P+VV 
Sbjct: 508 AGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVN 567

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCE-HGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           F T++ G+C +G +D A ++F ++ E +  S  + T+  ++  ++       AE++   M
Sbjct: 568 FGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKM 627

Query: 485 KAFGVHPQKSTFLLLAEARRATG 507
              G  P   T+ ++ +    TG
Sbjct: 628 CENGFSPDSYTYRVMIDGFCKTG 650



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 195/421 (46%), Gaps = 37/421 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+  L +  K  EA+     ++  G++P   TY +++          +   I+ 
Sbjct: 285 VITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILR 344

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
                G  PD   + ++IN   + G+++ A++ F +  E GL P     NTL+KG    G
Sbjct: 345 DGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQG 404

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              +++KL++ MS  G   P++ TYN+++   C    +++A N++    A G  PDV T+
Sbjct: 405 LILQALKLMNEMSENG-CSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTF 463

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK------------- 298
           NT+   Y +  + D A E++  M ++GV P+  T   I++G CK GK             
Sbjct: 464 NTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMME 523

Query: 299 ----------------------IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
                                 ++EAL     M+  G+ P++V F  L+KGF +  D DG
Sbjct: 524 KGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDG 583

Query: 337 VDEVLALMKE-FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
             ++   + E ++ +  + TY+ ++NA++    M+  +++F+ M + G  PD++ Y ++ 
Sbjct: 584 AYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMI 643

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G+ +          L+  IE G  P++  F  +++  C    +  A+ +   M   G+ 
Sbjct: 644 DGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIV 703

Query: 456 P 456
           P
Sbjct: 704 P 704



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 6/343 (1%)

Query: 160 EAMDTFWKMK-ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR--TY 216
           +A++ F  +K E G   T  TY  +I+  G  G+ E   ++L       N+   L    Y
Sbjct: 22  KALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVL--AETRMNIDNGLLEGVY 79

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
              +R +  +  I EA +V  +M     +P V +YN I     +    DQA +V + M  
Sbjct: 80  IGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRD 139

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G+ P+  T  I +  +C+  +   A R    M   G   + V +  +I GF E   R  
Sbjct: 140 KGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVE 199

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             E+   M    + PD++ ++ +++     G + + + + + + K G+ P+    +I  +
Sbjct: 200 AHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQ 259

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G+ +     +A  LL   +  G  P+V+ + T+I G C +  +  A     KM   G  P
Sbjct: 260 GFCQRAMLNEAIRLL-DGVGRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEP 318

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           +  T+ +++ GY +      A++IL+     G  P +ST+  L
Sbjct: 319 DGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSL 361



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/278 (23%), Positives = 125/278 (44%), Gaps = 37/278 (13%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N L + G   +A  +  + I  GH P + T+ TL+     + + ++   I+ ++  +G
Sbjct: 431 VINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHG 490

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD I +N+++N   ++G  E+ M TF  M E G  P   TYN L + +  A K EE++
Sbjct: 491 VSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEAL 550

Query: 198 KLLDLMSREGNVKPN------------------------------------LRTYNVLVR 221
            L++ M  +G + P+                                    + TYN+++ 
Sbjct: 551 NLIEEMQNKG-LTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMIN 609

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
           A+  + N+  A  + +KM  +G  PD  TY  +   + + G  +     ++     G+ P
Sbjct: 610 AFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIP 669

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +  T G +++  C + ++ EA+     M   G+ P +V
Sbjct: 670 SLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIVPEVV 707



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/301 (24%), Positives = 133/301 (44%), Gaps = 7/301 (2%)

Query: 226 EKNITEAWNVMHKMAA-SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
           +KN  +A  + + +    G K  ++TY  +      +GE +  EEV+ E   N    NG 
Sbjct: 17  QKNPLKALEIFNSVKKEDGFKHTLLTYKGMIEKLGFHGEFEAMEEVLAETRMN--IDNGL 74

Query: 285 TCGIIISG---YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
             G+ I     Y ++GKI+EA+     M  +   P++  +N ++   VE    D   +V 
Sbjct: 75  LEGVYIGAMRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVY 134

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M++  + PDV T++  M ++         + + ++M   G +  A AY  +  G+  E
Sbjct: 135 MRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEE 194

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
               +A EL   M+  G  P+++ F  +I   C  G +  +  + +K+ + GVSPNL T 
Sbjct: 195 NHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTV 254

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
              + G+ +      A  +L  +   G+ P   T+  L           EA+  L K+ N
Sbjct: 255 NIFIQGFCQRAMLNEAIRLLDGV-GRGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVN 313

Query: 522 K 522
           +
Sbjct: 314 E 314



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 1/146 (0%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEG-GHKPSLVTYTTLLAALTIQKRF 123
           NK     V +   LM    + G    A  +F  + E      ++ TY  ++ A   +   
Sbjct: 558 NKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNM 617

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           N    + +++ ENG  PDS  +  +I+ F ++GN+           E GL P+ +T+  +
Sbjct: 618 NMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRV 677

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNV 209
           +    +  +  E+V ++ LM  +G V
Sbjct: 678 LNCLCLKRRVHEAVGIIHLMVHKGIV 703


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 118/419 (28%), Positives = 210/419 (50%), Gaps = 1/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+   +  G  Q++  IF  +   G  PS+ T   +L ++       S+ S + ++ +  
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   FN +IN     G+ E++     KM++SG  PT  TYNT++  Y   G+ + ++
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LLD M  +G V  ++ TYN+L+   C    I + + ++  M    + P+ VTYNT+   
Sbjct: 249 ELLDHMKSKG-VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 307

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           ++  G+   A +++ EM   G+ PN  T   +I G+  EG  KEAL+    M+  G+ P+
Sbjct: 308 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPS 367

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V + +L+ G  +  + D        MK   V    ITY+ +++     GF+D+   + +
Sbjct: 368 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLN 427

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K GI PD   YS L  G+ +    + A+E++  +   G  PN +I++T+I   C  G
Sbjct: 428 EMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            +  AI +++ M   G + +  TF  L+    +A +   AEE ++ M + G+ P   +F
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 546



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 203/423 (47%), Gaps = 1/423 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           + ++ C  V +   L+N L   G  +++  +   + + G+ P++VTY T+L     + RF
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            +   ++  ++  G+D D   +N +I+    S  + +       M++  + P   TYNTL
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTL 304

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G+   GK   + +LL+ M   G + PN  T+N L+    +E N  EA  + + M A G
Sbjct: 305 INGFSNEGKVLIASQLLNEMLSFG-LSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKG 363

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           + P  V+Y  +     +N E D A    + M+ NGV     T   +I G CK G + EA+
Sbjct: 364 LTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M + G+ P++V ++ LI GF ++       E++  +    ++P+ I YST++   
Sbjct: 424 VLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G + +   I++ M   G   D   +++L     +  +  +AEE +  M   G  PN 
Sbjct: 484 CRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNT 543

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           V F  +I+G+ + G   +A  VFD+M + G  P   T+ +L+ G  +      AE+ L+ 
Sbjct: 544 VSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKS 603

Query: 484 MKA 486
           + A
Sbjct: 604 LHA 606



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 178/363 (49%), Gaps = 1/363 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P+ VTY TL+   + + +      +++++   G+ P+ + FNA+I+     GN +EA+  
Sbjct: 296 PNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKM 355

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F+ M+  GLTP+  +Y  L+ G     + + +      M R G     + TY  ++   C
Sbjct: 356 FYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRI-TYTGMIDGLC 414

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
               + EA  ++++M+  G+ PD+VTY+ +   + + G    A+E++  +   G+ PNG 
Sbjct: 415 KNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGI 474

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
               +I   C+ G +KEA+R    M   G   +   FN+L+    +       +E +  M
Sbjct: 475 IYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCM 534

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
               + P+ +++  ++N +  +G   K   +FD+M K G  P    Y  L KG  +    
Sbjct: 535 TSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHL 594

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            +AE+ L ++       + V++ T+++  C  G++ +A+ +F +M +  + P+  T+ +L
Sbjct: 595 REAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSL 654

Query: 465 MWG 467
           + G
Sbjct: 655 ISG 657



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/456 (22%), Positives = 202/456 (44%), Gaps = 37/456 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +++ L + G   EA  + N + + G  P +VTY+ L+       RF +   I+ ++  
Sbjct: 407 TGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYR 466

Query: 136 NGMDPDSIF-----------------------------------FNAVINAFSESGNMEE 160
            G+ P+ I                                    FN ++ +  ++G + E
Sbjct: 467 VGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAE 526

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A +    M   G+ P T +++ LI GYG +G+  ++  + D M++ G+  P   TY  L+
Sbjct: 527 AEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGH-HPTFFTYGSLL 585

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           +  C   ++ EA   +  + A     D V YNT+ TA  ++G   +A  +  EM    + 
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 645

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYG-VHPNLVIFNLLIKGFVEIMDRDGVDE 339
           P+  T   +ISG C++GK   A+ FA+  +  G V PN V++   + G  +         
Sbjct: 646 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 705

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
               M      PD++T + +++ +S  G ++K  ++  +MG     P+   Y+IL  GY 
Sbjct: 706 FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYS 765

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           + ++   +  L  ++I +G  P+ +   +++ G C    ++  +++       GV  +  
Sbjct: 766 KRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRY 825

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           TF  L+       +   A +++++M + G+   K T
Sbjct: 826 TFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDT 861



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 106/500 (21%), Positives = 203/500 (40%), Gaps = 84/500 (16%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-------IQKRFNSI 126
            S   L+N     G+  +A ++F+ + + GH P+  TY +LL  L         +K   S+
Sbjct: 545  SFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSL 604

Query: 127  HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
            H++ + V       D++ +N ++ A  +SGN+ +A+  F +M +  + P + TY +LI G
Sbjct: 605  HAVPAAV-------DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657

Query: 187  YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
                GK   ++         GNV PN   Y   V                 +M   G  P
Sbjct: 658  LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 717

Query: 247  DVVTYNTIATAYAQNGEADQAEEVIVEMEH------------------------------ 276
            D+VT N +   Y++ G+ ++  +++ EM +                              
Sbjct: 718  DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777

Query: 277  -----NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK----- 326
                 NG+ P+  TC  ++ G C+   ++  L+  +     GV  +   FN+LI      
Sbjct: 778  RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 837

Query: 327  -------GFVEIM-------DRDGVDEVLALM------KEFR----------VNPDVITY 356
                     V++M       D+D  D +++++      +E R          ++P+   Y
Sbjct: 838  GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897

Query: 357  STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
              ++N     G +     + ++M    I P   A S + +   +  + ++A  LL  M++
Sbjct: 898  IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957

Query: 417  SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
                P +  FTT++   C +G++  A+E+   M   G+  +L ++  L+ G         
Sbjct: 958  MKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAL 1017

Query: 477  AEEILQIMKAFGVHPQKSTF 496
            A E+ + MK  G     +T+
Sbjct: 1018 AFELYEEMKGDGFLANATTY 1037



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 92/442 (20%), Positives = 190/442 (42%), Gaps = 41/442 (9%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM--SQVEE 135
            L+ ++ + G   +A ++F  +++    P   TYT+L++ L   ++  ++ +I+   + E 
Sbjct: 619  LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLC--RKGKTVIAILFAKEAEA 676

Query: 136  NG-MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G + P+ + +   ++   ++G  +  +    +M   G TP   T N +I GY   GK E
Sbjct: 677  RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736

Query: 195  ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT---- 250
            ++  LL  M  + N  PNL TYN+L+  +   K+++ ++ +   +  +G+ PD +T    
Sbjct: 737  KTNDLLPEMGNQ-NGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795

Query: 251  -------------------------------YNTIATAYAQNGEADQAEEVIVEMEHNGV 279
                                           +N + +    NGE + A +++  M   G+
Sbjct: 796  VLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGI 855

Query: 280  QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
              +  TC  ++S   +  + +E+      M + G+ P    +  LI G   + D      
Sbjct: 856  SLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFV 915

Query: 340  VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
            V   M   ++ P  +  S ++ A +  G  D+   +   M K  + P   +++ L     
Sbjct: 916  VKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCC 975

Query: 400  REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
            +     +A EL + M   G   ++V +  +I+G C+ G M  A E++++M   G   N  
Sbjct: 976  KNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANAT 1035

Query: 460  TFETLMWGYSEARQPWRAEEIL 481
            T++ L+ G       +   +I+
Sbjct: 1036 TYKALIRGLLARETAFSGADII 1057



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/318 (25%), Positives = 145/318 (45%)

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
           LM+       N   Y++L+R +  E  I ++  +   M   G  P V T N I  +  ++
Sbjct: 112 LMTTYRLCNSNPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKS 171

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           GE       + EM    + P+  T  I+I+  C EG  +++    + M++ G  P +V +
Sbjct: 172 GEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTY 231

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N ++  + +        E+L  MK   V+ DV TY+ +++    +  + K   +  DM K
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRK 291

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
             I P+   Y+ L  G+  E +   A +LL  M+  G  PN V F  +I G  S+G+   
Sbjct: 292 RMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE 351

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A+++F  M   G++P+  ++  L+ G  +  +   A      MK  GV   + T+  + +
Sbjct: 352 ALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 502 ARRATGLTKEAKRILSKI 519
                G   EA  +L+++
Sbjct: 412 GLCKNGFLDEAVVLLNEM 429



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/238 (26%), Positives = 111/238 (46%)

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           I+I  Y +EG I+++L   R M  YG +P++   N ++   V+  +   V   L  M + 
Sbjct: 128 ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKR 187

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
           ++ PDV T++ ++N     G  +K   +   M K+G  P    Y+ +   Y ++   + A
Sbjct: 188 KICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 247

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            ELL  M   G   +V  +  +I   C    + +   +   M +  + PN  T+ TL+ G
Sbjct: 248 IELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLING 307

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
           +S   +   A ++L  M +FG+ P   TF  L +   + G  KEA ++   ++ K  T
Sbjct: 308 FSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 6/173 (3%)

Query: 342 ALMKEFRV---NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           ALM  +R+   NP V  Y  ++  +   G +    EIF  MG  G  P  +  + +    
Sbjct: 111 ALMTTYRLCNSNPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSV 168

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           V+  E       L  M++    P+V  F  +I+  C++GS +++  +  KM + G +P +
Sbjct: 169 VKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTI 228

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-LLLAEARRATGLTK 510
            T+ T++  Y +  +   A E+L  MK+ GV     T+ +L+ +  R+  + K
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAK 281



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/210 (20%), Positives = 97/210 (46%), Gaps = 7/210 (3%)

Query: 64   MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
            ++K++C    +M  ++N      + QE++ + + + + G  P    Y  L+  L      
Sbjct: 857  LDKDTCD---AMVSVLN---RNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDI 910

Query: 124  NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
             +   +  ++  + + P ++  +A++ A ++ G  +EA      M +  L PT +++ TL
Sbjct: 911  KTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTL 970

Query: 184  IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
            +      G   E+++L  +MS  G +K +L +YNVL+   C + ++  A+ +  +M   G
Sbjct: 971  MHLCCKNGNVIEALELRVVMSNCG-LKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDG 1029

Query: 244  MKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
               +  TY  +         A    ++I++
Sbjct: 1030 FLANATTYKALIRGLLARETAFSGADIILK 1059


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 232/449 (51%), Gaps = 2/449 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T +++ L   G+  +A  +FN +++ G  P++VTY +++ AL   +  +    ++ 
Sbjct: 272 VVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLR 331

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ +N + PD + + A+I+ +S  G  +EA   F +M   GL P   T+N+L+       
Sbjct: 332 QMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHK 391

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+ ++   ++ +G+ KP++ +Y++L+  +  E    +  N+ H M  +G+  D   +
Sbjct: 392 RSKEAAEIFHSIATKGH-KPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCF 450

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  A+A+ G  D+A  +  EM   GV PN  T   +I+  C+ G++ +A+     M  
Sbjct: 451 NILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMIS 510

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA-LMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            G+ PN V+++ LI+GF    D     E+++ +M +    P++  +S+I+++    G + 
Sbjct: 511 IGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVM 570

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             +++F+ +   G +PD   ++ L  GY    + +KA  +L  M+ +G  P+VV ++T+I
Sbjct: 571 NAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLI 630

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+   G +D  + +F +M    V P   T+  ++ G   A +   A+++   M   G  
Sbjct: 631 NGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTA 690

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
              ST+ ++ +       T EA  +  K+
Sbjct: 691 MSISTYTIILQGLCRNNCTDEAITLFHKL 719



 Score =  188 bits (478), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 111/436 (25%), Positives = 209/436 (47%), Gaps = 2/436 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+ +EA  +F  +   G  P +VT+ +L+ +L   KR      I   +   G  PD I +
Sbjct: 356 GRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISY 415

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           + +++ ++  G   +  + F  M ++G+   +  +N LI  +   G  +E++ +   M  
Sbjct: 416 SILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRG 475

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G V PN+ TY  ++ A C    + +A   + +M + G+KP+ V Y+++   +  +G+  
Sbjct: 476 QG-VSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLI 534

Query: 266 QAEEVIVEMEHNGV-QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           +A+E++ EM   G+ +PN      II   C EG++  A      +   G  P++  FN L
Sbjct: 535 KAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSL 594

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G+  +   D    VL  M      PDV+TYST++N +  +G +D    +F +M    +
Sbjct: 595 IDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRV 654

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           KP    YS++  G  R      A+++   MIESG   ++  +T I+ G C +   D AI 
Sbjct: 655 KPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAIT 714

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           +F K+    +   +    T++    + ++   A ++   + A G+ P  ST+ ++     
Sbjct: 715 LFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLL 774

Query: 505 ATGLTKEAKRILSKIK 520
             G  +EA  + S ++
Sbjct: 775 KEGSVEEADIMFSSME 790



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/470 (25%), Positives = 227/470 (48%), Gaps = 25/470 (5%)

Query: 43  KQLYSNSKPTDSQPQT---HCSFCMN--KESCRTVRSMTK------------LMNSLIER 85
           +Q++ NS   D    T   H   C+   KE+ +  + MT+            LM+SL + 
Sbjct: 331 RQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKH 390

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
            + +EA  IF+++   GHKP +++Y+ LL     + RF  ++++   + +NG+  DS  F
Sbjct: 391 KRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCF 450

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +INA ++ G M+EA+  F +M+  G++P   TY T+I      G+  ++++ L  M  
Sbjct: 451 NILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMIS 510

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM-KPDVVTYNTIATAYAQNGEA 264
            G +KPN   Y+ L++ +C   ++ +A  ++ +M   G+ +P++  +++I  +    G  
Sbjct: 511 IG-LKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRV 569

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
             A++V   + H G +P+  T   +I GYC  GK+ +A      M   G  P++V ++ L
Sbjct: 570 MNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTL 629

Query: 325 IKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           I G+ +      +D+ L L +E    RV P  +TYS +++    AG     K++F +M +
Sbjct: 630 INGYFK---SGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIE 686

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
           +G       Y+I+ +G  R    ++A  L   +        + I  T+I         + 
Sbjct: 687 SGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREE 746

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           A ++F  +   G+ PN  T+  ++    +      A+ +   M+  G  P
Sbjct: 747 AHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAP 796



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 203/430 (47%), Gaps = 6/430 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLV-----TYTTLLAALTIQKRFNSIHS 128
           ++ +  +S+     P  A A+FN +      P +V     TY  L+      +R +   +
Sbjct: 127 ALARARDSVACSDAPALAVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPA 186

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGY 187
             +++   G+  D I  N  +     +   +EA+     +M E G  P   +YNT+IK  
Sbjct: 187 FFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSL 246

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
               + +E++ +L  M++     P++ +Y +++     E  I++A N+ ++M   G+ P+
Sbjct: 247 CGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPN 306

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           VVTYN+I  A  +    D+AE V+ +M  N +QP+  T   +I GY   G+ KEA +  +
Sbjct: 307 VVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFK 366

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M   G+ P++V FN L+    +        E+   +      PD+I+YS +++ ++T G
Sbjct: 367 EMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEG 426

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
                  +F  M   GI  D+H ++IL   + +    ++A  +   M   G  PNVV + 
Sbjct: 427 RFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYA 486

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T+I+  C  G +  A+E   +M   G+ PN   + +L+ G+       +A+E++  M   
Sbjct: 487 TVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQ 546

Query: 488 GVHPQKSTFL 497
           G+     TF 
Sbjct: 547 GIPRPNITFF 556



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/384 (25%), Positives = 167/384 (43%), Gaps = 38/384 (9%)

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN- 234
           T  TY  L+     A +P+        + R G     + T N  ++  C  K   EA + 
Sbjct: 164 TVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGIVT-NTFLKCLCYAKRTDEALSM 222

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM-EHNGVQPNGRTCGIIISGY 293
           ++H+M+  G  PD  +YNT+  +      + +A ++++ M + +G  P+  +  ++I G 
Sbjct: 223 LLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGL 282

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
             EG+I +A      M + GV PN+V +N ++    +    D  + VL  M +  + PD 
Sbjct: 283 FMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDE 342

Query: 354 ITYSTIMNAWSTAG--------------------------FMDK-CK--------EIFDD 378
           +TY+ +++ +S  G                           MD  CK        EIF  
Sbjct: 343 VTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHS 402

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           +   G KPD  +YSIL  GY  E        L  +M ++G   +   F  +I+     G 
Sbjct: 403 IATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGM 462

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           MD A+ +F +M   GVSPN+ T+ T++       +   A E L  M + G+ P    +  
Sbjct: 463 MDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHS 522

Query: 499 LAEARRATGLTKEAKRILSKIKNK 522
           L +     G   +AK ++S++ ++
Sbjct: 523 LIQGFCTHGDLIKAKELVSEMMDQ 546



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/366 (22%), Positives = 157/366 (42%), Gaps = 37/366 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N+  +RG   EA  IF  +   G  P++VTY T++AAL    R       +SQ+   G
Sbjct: 453 LINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIG 512

Query: 138 MDPDSI------------------------------------FFNAVINAFSESGNMEEA 161
           + P+++                                    FF+++I++    G +  A
Sbjct: 513 LKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNA 572

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
            D F  +   G  P   T+N+LI GY + GK +++  +LD M   G  +P++ TY+ L+ 
Sbjct: 573 QDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGT-EPDVVTYSTLIN 631

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
            +     I +   +  +M    +KP  VTY+ +     + G    A+++  EM  +G   
Sbjct: 632 GYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAM 691

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T  II+ G C+     EA+     +    +   + I N +I    ++  R+   ++ 
Sbjct: 692 SISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLF 751

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
           A +    + P+  TY  ++      G +++   +F  M K G  P +   + + +  +++
Sbjct: 752 ASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLLNDIIRMLLQK 811

Query: 402 QEPEKA 407
            E  KA
Sbjct: 812 GEIVKA 817



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/234 (22%), Positives = 102/234 (43%), Gaps = 1/234 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+N   + G+  +   +F  ++    KP+ VTY+ +L  L    R ++   +  
Sbjct: 623 VVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFH 682

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E+G       +  ++     +   +EA+  F K+    L    +  NT+I       
Sbjct: 683 EMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVK 742

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE+  L   +S  G V PN  TY V++     E ++ EA  +   M  +G  P     
Sbjct: 743 RREEAHDLFASVSASGLV-PNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAPSSRLL 801

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           N I     Q GE  +A   + +++   +     T  ++IS +  +G+ +E ++F
Sbjct: 802 NDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKF 855


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 214/427 (50%), Gaps = 6/427 (1%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A  +F  +++    PS+  +  LL+A+   K+F+ + S+  +++  G+  +   +N
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYN 124

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN F     +  A+    KM + G  P+  T ++L+ GY    +  ++V L+D M   
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +P+  T+  L+         +EA  ++ +M   G +P++VTY  +     + G+ D 
Sbjct: 185 G-YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDL 243

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  ++ +ME   ++ N      +I   CK     +AL     M+  GV PN++ ++ LI 
Sbjct: 244 AFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLIS 303

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
                        +L+ M E ++NP+V+T++ +++A+   G + + ++++D+M K  I P
Sbjct: 304 CLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDP 363

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   YS L  G+      ++A+ +   MI     PNVV + T+I+G+C    +D  +E+F
Sbjct: 364 DIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELF 423

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            +M + G+  N  T+ TL+ G+ +AR    A+ + + M + GVHP   T+  L +     
Sbjct: 424 REMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLD----- 478

Query: 507 GLTKEAK 513
           GL K  K
Sbjct: 479 GLCKNGK 485



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 219/437 (50%), Gaps = 1/437 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++    KL++++ +  K     ++   +   G   +L TY  L+     + + +   +++
Sbjct: 84  SIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALL 143

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G +P  +  ++++N +     + +A+    +M E G  P T T+ TLI G  + 
Sbjct: 144 GKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLH 203

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K  E+V L+D M + G  +PNL TY V+V   C   +I  A+N+++KM A+ ++ +VV 
Sbjct: 204 NKASEAVALVDRMVQRG-CQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVI 262

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+T+  +  +    D A  +  EME+ GV+PN  T   +IS  C   +  +A R    M 
Sbjct: 263 YSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMI 322

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E  ++PN+V FN LI  FV+       +++   M +  ++PD+ TYS+++N +     +D
Sbjct: 323 ERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD 382

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + K +F+ M      P+   Y+ L  G+ + +  ++  EL   M + G   N V +TT+I
Sbjct: 383 EAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLI 442

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+      D A  VF +M   GV PN+ T+ TL+ G  +  +  +A  + + ++   + 
Sbjct: 443 HGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKME 502

Query: 491 PQKSTFLLLAEARRATG 507
           P   T+ ++ E     G
Sbjct: 503 PTIYTYNIMIEGMCKAG 519



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 207/385 (53%), Gaps = 3/385 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++ L    K  EA A+ + +++ G +P+LVTY  ++  L  +   +   ++++++
Sbjct: 192 TFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKM 251

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E   ++ + + ++ VI++  +  + ++A++ F +M+  G+ P   TY++LI       + 
Sbjct: 252 EAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERW 311

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            ++ +LL D++ R+  + PN+ T+N L+ A+  E  + EA  +  +M    + PD+ TY+
Sbjct: 312 SDASRLLSDMIERK--INPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYS 369

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++   +  +   D+A+ +   M      PN  T   +I+G+CK  +I E +   R M + 
Sbjct: 370 SLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQR 429

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+  N V +  LI GF +  D D    V   M    V+P+++TY+T+++     G ++K 
Sbjct: 430 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKA 489

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             +F+ + ++ ++P  + Y+I+ +G  +  + E   +L  ++   G  P+V+I+ T+ISG
Sbjct: 490 MVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISG 549

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPN 457
           +C  G  + A  +F KM E G  P+
Sbjct: 550 FCRKGLKEEADALFRKMREDGPLPD 574



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 98/425 (23%), Positives = 209/425 (49%), Gaps = 1/425 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +++ L+N      +  +A A+ + ++E G++P  +T+TTL+  L +  + +   +++
Sbjct: 154 SIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALV 213

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G  P+ + +  V+N   + G+++ A +   KM+ + +      Y+T+I      
Sbjct: 214 DRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKY 273

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              ++++ L   M  +G V+PN+ TY+ L+   CN +  ++A  ++  M    + P+VVT
Sbjct: 274 RHEDDALNLFTEMENKG-VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVT 332

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +N +  A+ + G+  +AE++  EM    + P+  T   +I+G+C   ++ EA      M 
Sbjct: 333 FNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                PN+V +N LI GF +    D   E+   M +  +  + +TY+T+++ +  A   D
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             + +F  M   G+ P+   Y+ L  G  +  + EKA  +   +  S   P +  +  +I
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C  G ++   ++F  +   GV P++  + T++ G+        A+ + + M+  G  
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572

Query: 491 PQKST 495
           P   T
Sbjct: 573 PDSGT 577



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 50/184 (27%), Positives = 94/184 (51%), Gaps = 1/184 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ++K+    V +   L+N   +  +  E   +F  + + G   + VTYTTL+      +  
Sbjct: 392 ISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDC 451

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           ++   +  Q+  +G+ P+ + +N +++   ++G +E+AM  F  ++ S + PT  TYN +
Sbjct: 452 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIM 511

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I+G   AGK E+   L   +S +G VKP++  YN ++  +C +    EA  +  KM   G
Sbjct: 512 IEGMCKAGKVEDGWDLFCSLSLKG-VKPDVIIYNTMISGFCRKGLKEEADALFRKMREDG 570

Query: 244 MKPD 247
             PD
Sbjct: 571 PLPD 574



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/187 (22%), Positives = 89/187 (47%), Gaps = 3/187 (1%)

Query: 337 VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
           +D+ + L   M + R  P +  ++ +++A +     D    + + M + GI  + + Y+I
Sbjct: 66  LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L   + R  +   A  LL  M++ G+ P++V  +++++G+C    +  A+ + D+M E G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
             P+  TF TL+ G     +   A  ++  M   G  P   T+ ++       G    A 
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245

Query: 514 RILSKIK 520
            +L+K++
Sbjct: 246 NLLNKME 252


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 221/443 (49%), Gaps = 13/443 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF-NSIHSI 129
           TV +   L+      G+     A   N+++ G +   +T+T LL  L   KR  +++  +
Sbjct: 91  TVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIV 150

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES---GLTPTTSTYNTLIKG 186
           + ++ E G  PD   +N ++    +    +EA++    M +    G  P   +YNT++ G
Sbjct: 151 LRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNG 210

Query: 187 Y---GIAGKP-----EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           +   GI  K      ++++++L+ M + G V P+  TYN ++  +C+     EA   + K
Sbjct: 211 FFKEGIQTKLTAQAMDKAMEVLNTMVKNG-VMPDCMTYNSILHGYCSSGQPKEAIGTLKK 269

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M + G++P+VVTY+++     +NG + +A ++   M   G++P+  T   ++ G+CKEG+
Sbjct: 270 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGR 329

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           + E+ +    M   GV P+++ +N LI G       D   ++LA M    V PD++TY T
Sbjct: 330 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 389

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++N +     MD    +F +M  +G+ P+   Y+I+ +G    +    A+EL +++ +SG
Sbjct: 390 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 449

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
               +  +  I+ G C +   D A+ +F  +C   +    +TF  ++    +  +   A+
Sbjct: 450 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 509

Query: 479 EILQIMKAFGVHPQKSTFLLLAE 501
           ++     A G+ P   T+ L+AE
Sbjct: 510 DLFAAHSANGLVPDVRTYSLMAE 532



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 212/444 (47%), Gaps = 13/444 (2%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI--HSIMSQVEENGMDPDSIFFN 146
           ++A+ +F+ L+  G   S+      LA +       ++  ++ M++     + P    + 
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I     +G ++        + + G      T+  L+KG     +  +++ ++     E
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA---ASGMKPDVVTYNTIATAYAQNG- 262
               P++ +YN L++  C+E    EA  ++H MA     G  PDVV+YNT+   + + G 
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGI 216

Query: 263 -------EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
                    D+A EV+  M  NGV P+  T   I+ GYC  G+ KEA+   + M+  GV 
Sbjct: 217 QTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 276

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN+V ++ L+    +        ++   M +  + PD+ TY T++      G + + +++
Sbjct: 277 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKL 336

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           FD M + G+KPD   Y+ L  G     + ++A +LL +M+  G  P++V + T+I+G+C 
Sbjct: 337 FDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCR 396

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              MD A+ +F +M   GVSPN+ T+  ++ G    R+   A+E+   +   G   + ST
Sbjct: 397 VSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELST 456

Query: 496 FLLLAEARRATGLTKEAKRILSKI 519
           + ++        LT EA R+   +
Sbjct: 457 YNIILHGLCKNNLTDEALRMFQNL 480



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/479 (25%), Positives = 219/479 (45%), Gaps = 19/479 (3%)

Query: 83  IERGKPQEAQAIFNNLIEGGH---KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           + R  P  A + +N +   G     P++ TY  L+       R +   + +  V + G  
Sbjct: 65  VARHSPAAAVSRYNRMARAGAGKVTPTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFR 124

Query: 140 PDSIFFNAVINAFSESGNMEEAMD-TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            D+I F  ++          +AMD    +M E G  P   +YN L+KG     + +E+++
Sbjct: 125 VDAITFTPLLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALE 184

Query: 199 LLDLMS--REGNVKPNLRTYNVLVRAWCNE--------KNITEAWNVMHKMAASGMKPDV 248
           LL +M+  R G   P++ +YN ++  +  E        + + +A  V++ M  +G+ PD 
Sbjct: 185 LLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDC 244

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           +TYN+I   Y  +G+  +A   + +M  +GV+PN  T   +++  CK G+  EA +   +
Sbjct: 245 MTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDS 304

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M + G+ P++  +  L++G  +       +++  LM    V PD+ITY+T+++    AG 
Sbjct: 305 MTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGK 364

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           MD+  ++   M   G+KPD   Y  L  GY R    + A  L   M+ SG  PN++ +  
Sbjct: 365 MDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNI 424

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           I+ G         A E++  + + G    L T+  ++ G  +      A  + Q +    
Sbjct: 425 ILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTD 484

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSK-----IKNKERTNEMEAEEDIPVESLERL 542
           +  +  TF ++  A    G   EAK + +      +    RT  + AE  I   SLE L
Sbjct: 485 LQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEEL 543



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 104/440 (23%), Positives = 220/440 (50%), Gaps = 14/440 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIE---GGHKPSLVTYTTLLAAL---TIQKRFNS 125
           V S   L+  L +  + QEA  + + + +   GG  P +V+Y T+L       IQ +  +
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTA 222

Query: 126 -----IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
                   +++ + +NG+ PD + +N++++ +  SG  +EA+ T  KM+  G+ P   TY
Sbjct: 223 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 282

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           ++L+      G+  E+ K+ D M++ G ++P++ TY  L++  C E  + E+  +   M 
Sbjct: 283 SSLMNYLCKNGRSTEARKIFDSMTKRG-LEPDIATYRTLLQGHCKEGRVIESEKLFDLMV 341

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
             G+KPD++TYNT+       G+ D+A +++  M   GV+P+  T G +I+GYC+  ++ 
Sbjct: 342 RIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMD 401

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           +AL   + M   GV PN++ +N++++G           E+   + +     ++ TY+ I+
Sbjct: 402 DALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIIL 461

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           +        D+   +F ++    ++ +   ++I+    ++    ++A++L      +G  
Sbjct: 462 HGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLV 521

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+V  ++ +       GS++   ++F  M E+G S + +   +++    +     RA   
Sbjct: 522 PDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTY 581

Query: 481 LQIM--KAFGVHPQKSTFLL 498
           L ++  K F +    ++FLL
Sbjct: 582 LFMIDEKHFSLEASTASFLL 601



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/319 (22%), Positives = 135/319 (42%), Gaps = 48/319 (15%)

Query: 59  HCSFCMNKESCRTVRSM------------TKLMNSLIERGKPQEAQAIFNNLIEGGHKPS 106
           +CS    KE+  T++ M            + LMN L + G+  EA+ IF+++ + G +P 
Sbjct: 254 YCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPD 313

Query: 107 LVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW 166
           + TY TLL     + R      +   +   G+ PD I +N +I+    +G M+EA     
Sbjct: 314 IATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLA 373

Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN-------------- 212
            M   G+ P   TY TLI GY    + ++++ L   M   G V PN              
Sbjct: 374 SMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG-VSPNIITYNIILQGLFHT 432

Query: 213 ---------------------LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
                                L TYN+++   C      EA  +   +  + ++ +  T+
Sbjct: 433 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 492

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  A  + G  D+A+++      NG+ P+ RT  ++     ++G ++E      +M+E
Sbjct: 493 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 552

Query: 312 YGVHPNLVIFNLLIKGFVE 330
            G   +  + N +++  ++
Sbjct: 553 NGCSADSRMLNSIVRKLLQ 571



 Score = 45.8 bits (107), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 33/151 (21%), Positives = 64/151 (42%), Gaps = 14/151 (9%)

Query: 35  KKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAI 94
           K N   E  +++ N   TD Q +T              R+   ++ +L++ G+  EA+ +
Sbjct: 466 KNNLTDEALRMFQNLCLTDLQLET--------------RTFNIMIGALLKCGRMDEAKDL 511

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           F      G  P + TY+ +   L  Q     +  +   +EENG   DS   N+++    +
Sbjct: 512 FAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQ 571

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
            G++  A    + + E   +   ST + L++
Sbjct: 572 RGDITRAGTYLFMIDEKHFSLEASTASFLLE 602


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 206/411 (50%), Gaps = 4/411 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   +M+ L + GK + A ++   + E   +PS  TY TL++ L  Q+  +   +++ + 
Sbjct: 47  TFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEF 106

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G  PD + ++ + +   + G ++EA +   +M  +G TP   TYNTLI G   A K 
Sbjct: 107 VSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKT 166

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E++ +LL+ +   G V P++ TY ++V   C E  + +A  ++  M   G  P V+TY  
Sbjct: 167 EKAYELLETLVSSGFV-PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTA 225

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G  D+A  +  EM       +      +++GYCK  + KEA +    ++   
Sbjct: 226 LMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG-- 283

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P + ++N L+ G+ +    D +  V   M      P++ TY+ +M+     G +D+  
Sbjct: 284 -TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAF 342

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
              + M  AG  PD  +Y+I+  G  +  +P++A ++L  MI++G  P+ V + T+++ +
Sbjct: 343 PFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQF 402

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           C +   D A+ +   M + GV P+  T+ TL+ G S+  +   A E++  M
Sbjct: 403 CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM 453



 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 108/387 (27%), Positives = 196/387 (50%), Gaps = 8/387 (2%)

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           E  + PD   +N +I+   ++   ++A +   +M + G+TP T T+N+++ G   AGK E
Sbjct: 3   ERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFE 62

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            +  LL +M+ E N +P+  TYN L+   C ++N+  A  ++ +  +SG  PDVVTY+ +
Sbjct: 63  RAHSLLAVMA-ERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSIL 121

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
           A    + G  D+A E++ EM  NG  PN  T   +I G CK  K ++A     T+   G 
Sbjct: 122 ADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGF 181

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P++V + +++ G  +    D   +++  M +    P VITY+ +M      G +D+   
Sbjct: 182 VPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHH 241

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH--PNVVIFTTIISG 432
           IF +M       DA AY  L  GY +    ++A++++      G    P + ++  ++ G
Sbjct: 242 IFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVV-----DGIRGTPYIDVYNALMDG 296

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C +G +D    VF+ M   G  PN+KT+  +M G  +  +   A   L+ M + G  P 
Sbjct: 297 YCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPD 356

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKI 519
             ++ ++ +        KEA+++L ++
Sbjct: 357 VVSYNIIIDGLFKASKPKEARQVLDQM 383



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 221/448 (49%), Gaps = 11/448 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   +  + +EAQ + +  I G   P +  Y  L+     + R + I ++   +   G
Sbjct: 261 LVNGYCKSSRTKEAQKVVDG-IRG--TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG 317

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+   +N V++   + G ++EA      M  +G  P   +YN +I G   A KP+E+ 
Sbjct: 318 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 377

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++LD M + G + P+  TYN L+  +C E+   +A  ++  M  +G+ PD VTYNT+ + 
Sbjct: 378 QVLDQMIQAG-IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 436

Query: 258 YAQNGEADQAEEVIVEMEHNG-VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            +Q      A E++ EM  NG V     T   II   CKEG +K+AL     M  +GV  
Sbjct: 437 LSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 496

Query: 317 NLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           N V +N+    F++ + ++G +DE  +L+ E     D ++Y+T++     A  +D+  ++
Sbjct: 497 NTVTYNI----FIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKL 552

Query: 376 FDDM-GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
             +M    G+   +H +++L   + + +  ++A  LL  M++ G  P+V+ +  +I+  C
Sbjct: 553 AREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITCLC 612

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
               +D+A E+FD+M   G+  +  ++  L++G     +   A ++L+ M +        
Sbjct: 613 KLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDL 672

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
               L  A R  G  +EA  +L ++  K
Sbjct: 673 KCRKLYLALRGQGRGEEAAELLRRMTTK 700



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 196/419 (46%), Gaps = 4/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L +  K  +A  + + +++ G  P  VT+ +++  L    +F   HS+++ + E  
Sbjct: 16  LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 75

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P    +N +I+   +  N++ A     +   SG  P   TY+ L  G    G+ +E+ 
Sbjct: 76  CRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 135

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+  MS  G   PNL TYN L+   C      +A+ ++  + +SG  PDVVTY  I   
Sbjct: 136 ELVKEMSGNG-CTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDVVTYTIIVDG 194

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G  D+A +++  M   G  P+  T   ++ G C+ G++ EA    + M       +
Sbjct: 195 LCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTAD 254

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +  L+ G+ +        E   ++   R  P +  Y+ +M+ +   G +D+   +F+
Sbjct: 255 ALAYVSLVNGYCK---SSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFE 311

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM   G  P+   Y+I+  G  +  + ++A   L +M  +G  P+VV +  II G     
Sbjct: 312 DMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKAS 371

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
               A +V D+M + G+ P+  T+ TLM  + +  +   A  IL+ M   GV P   T+
Sbjct: 372 KPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTY 430



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 209/479 (43%), Gaps = 38/479 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L + L +RG+  EA  +   +   G  P+LVTY TL+  L    +    + ++ 
Sbjct: 115 VVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLE 174

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G  PD + +  +++   + G +++A+     M + G TP+  TY  L++G    G
Sbjct: 175 TLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG 234

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+  +   M  + +   +   Y  LV  +C      EA  V+  +  +   P +  Y
Sbjct: 235 RVDEAHHIFKEMVSK-DCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVY 290

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y + G  D+   V  +M   G  PN +T  I++ G CK GK+ EA  F  +M  
Sbjct: 291 NALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS 350

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P++V +N++I G  +        +VL  M +  + PD +TY+T+M  +      D 
Sbjct: 351 AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 410

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG-FHPNVVIFTTII 430
              I  +M KAG+ PD   Y+ L  G  +      A EL+  M+ +G        + TII
Sbjct: 411 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTII 470

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE---------------------------- 462
              C +G + +A+ + D M  HGV  N  T+                             
Sbjct: 471 DRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDE 530

Query: 463 ----TLMWGYSEARQPWRAEEILQIMKAF-GVHPQKSTFLLLAEARRATGLTKEAKRIL 516
               T++ G  +A Q  RA ++ + M A  G+     TF LL +A   T    EA  +L
Sbjct: 531 VSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 589



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 94/326 (28%), Positives = 153/326 (46%), Gaps = 21/326 (6%)

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PDV TYN +     +  + D+A E++ EM   GV P+  T   I+ G CK GK + A   
Sbjct: 8   PDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSL 67

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNA 362
              M E    P+   +N LI G  +   +  VD    L+ EF  +   PDV+TYS + + 
Sbjct: 68  LAVMAERNCRPSCCTYNTLISGLCK---QQNVDRAKTLVDEFVSSGFVPDVVTYSILADG 124

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G +D+  E+  +M   G  P+   Y+ L  G  +  + EKA ELL T++ SGF P+
Sbjct: 125 LCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPD 184

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           VV +T I+ G C +G +D+A+++ + M + G +P++ T+  LM G     +   A  I +
Sbjct: 185 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 244

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
            M +         ++ L      +  TKEA++++  I+     +   A  D         
Sbjct: 245 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDG-------- 296

Query: 543 YHKEATTASYPNLLQ-------IPNV 561
           Y KE      PN+ +       +PN+
Sbjct: 297 YCKEGRLDEIPNVFEDMACRGCVPNI 322



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 168/355 (47%), Gaps = 8/355 (2%)

Query: 68  SCR----TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +CR     +++   +M+ L + GK  EA     ++   G  P +V+Y  ++  L    + 
Sbjct: 314 ACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKP 373

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                ++ Q+ + G+ PD++ +N ++  F +    ++A+     M ++G+ P   TYNTL
Sbjct: 374 KEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTL 433

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G     +  ++ +L+  M R G V     TYN ++   C E  + +A  +M  M   G
Sbjct: 434 ISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHG 493

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++ + VTYN       + G  D+A  ++ EM+    + +  T   +I G CK  ++  A 
Sbjct: 494 VEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTT---VIIGLCKAEQLDRAS 550

Query: 304 RFARTMKEY-GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           + AR M    G+      FNLLI  F +    D    +L LM +   +P VITY+ ++  
Sbjct: 551 KLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMVITC 610

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
                 +DK  E+FD+M   GI   + +Y++L  G   +   ++A ++L  M  S
Sbjct: 611 LCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASS 665


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 218/479 (45%), Gaps = 48/479 (10%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           + SL+ RG+  EA      L+    +P   T   L+  L+   R      +++       
Sbjct: 72  LRSLVRRGELDEAL----RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAAC----- 122

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            PD + +NA++  +  +G ++ A     +M    + P   TYNTLI+G    G+   ++ 
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEMP---VEPDAYTYNTLIRGLCGRGRTANALA 179

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           +LD M R   V P++ TY +L+ A C      +A  ++ +M   G  PD+VTYN +    
Sbjct: 180 VLDEMLRRRCV-PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 238

Query: 259 AQNGEADQA-----------------------------------EEVIVEMEHNGVQPNG 283
            Q G  D A                                   EE++ EM   G  PN 
Sbjct: 239 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 298

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T  ++IS  C++G ++ AL     + +YG  PN + +N L+  F +    D     L L
Sbjct: 299 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDL 358

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M      PD+++Y+T++ A   +G +D   E+   +   G  P   +Y+ +  G  +  +
Sbjct: 359 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 418

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            ++A ELL  M+  G  P+++ ++TI +G C +  ++ AI  F K+ + G+ PN   +  
Sbjct: 419 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 478

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           ++ G  + R+   A ++   M   G  P +ST+ +L E     GL KEA+ +L ++ ++
Sbjct: 479 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 537



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 192/386 (49%), Gaps = 1/386 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           +P   TY TL+  L  + R  +  +++ ++      PD + +  ++ A  +    ++AM 
Sbjct: 155 EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMK 214

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              +M++ G TP   TYN ++ G    G+ +++++ L  +   G  +PN  +YN++++  
Sbjct: 215 LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG-CEPNTVSYNIVLKGL 273

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C  +   +A  +M +M   G  P+VVT+N + +   + G  + A EV+ ++   G  PN 
Sbjct: 274 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 333

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            +   ++  +CK+ K+ +A+ F   M   G +P++V +N L+       + D   E+L  
Sbjct: 334 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 393

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           +K+    P +I+Y+T+++  + AG   +  E+ ++M   G++PD   YS +A G  RE  
Sbjct: 394 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 453

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            E A      + + G  PN V++  II G C       AI++F  M  +G  PN  T+  
Sbjct: 454 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 513

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGV 489
           L+ G +       A ++L  + + GV
Sbjct: 514 LIEGLAYEGLIKEARDLLDELCSRGV 539



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 174/383 (45%), Gaps = 36/383 (9%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+ +  +R   ++A  + + + + G  P +VTY  ++  +  + R +     + 
Sbjct: 193 VVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLK 252

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G +P+++ +N V+     +   E+A +   +M + G  P   T+N LI      G
Sbjct: 253 NLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKG 312

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E ++++L+ + + G   PN  +YN L+ A+C +K + +A   +  M + G  PD+V+Y
Sbjct: 313 LVEPALEVLEQIPKYG-CTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSY 371

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+ TA  ++GE D A E++ +++  G  P   +   +I G  K GK KEAL     M  
Sbjct: 372 NTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVS 431

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P                                   D+ITYSTI         ++ 
Sbjct: 432 KGLQP-----------------------------------DIITYSTIAAGLCREDRIED 456

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
               F  +   GI+P+   Y+ +  G  + +E   A +L   MI +G  PN   +T +I 
Sbjct: 457 AIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIE 516

Query: 432 GWCSDGSMDRAIEVFDKMCEHGV 454
           G   +G +  A ++ D++C  GV
Sbjct: 517 GLAYEGLIKEARDLLDELCSRGV 539



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/271 (28%), Positives = 135/271 (49%), Gaps = 6/271 (2%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C   V +   L++ L  +G  + A  +   + + G  P+ ++Y  LL A   QK+
Sbjct: 289 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 348

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +   + +  +   G  PD + +N ++ A   SG ++ A++   ++K+ G  P   +YNT
Sbjct: 349 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 408

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G   AGK +E+++LL+ M  +G ++P++ TY+ +    C E  I +A     K+   
Sbjct: 409 VIDGLTKAGKTKEALELLNEMVSKG-LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 467

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G++P+ V YN I     +  E   A ++   M  NG  PN  T  I+I G   EG IKEA
Sbjct: 468 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 527

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
                 +   GV    V  +L+ KG + ++D
Sbjct: 528 RDLLDELCSRGV----VRKSLINKGAIRLLD 554


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 204/411 (49%), Gaps = 4/411 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   +M+ L + GK + A ++   + E   +PS  TY TL++ L  Q+  +    ++ + 
Sbjct: 298 TFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEF 357

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G  PD + ++ + +   + G ++EA +   +M   G TP   TYNTLI G   A K 
Sbjct: 358 VSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKT 417

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E++ +LL+ +   G V P++ TY ++V   C E  + +A  ++  M   G  P V+TY  
Sbjct: 418 EKAYELLESLVSSGFV-PDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTA 476

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G  D+A  +  EM       +      +++GYCK  + KEA +    ++   
Sbjct: 477 LMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG-- 534

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P + ++N L+ G+ +    D +  V   M      P++ TY+ +M+     G +D+  
Sbjct: 535 -TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAF 593

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
              + M  AG  PD  +Y+I+  G  +  +P++A ++L  MI++G  P+ V + T+++ +
Sbjct: 594 PFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQF 653

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           C +   D A+ +   M + GV P+  T+ TL+ G S+  +   A E++  M
Sbjct: 654 CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEM 704



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 225/495 (45%), Gaps = 27/495 (5%)

Query: 78  LMNSLIERGK-PQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           +++ +++R K PQ A   F    + G K S  T    L  L      + I ++  ++ + 
Sbjct: 95  VVSRVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDA 154

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  PDS  ++ VI +  +   +++A     K K  G  P  S Y  L + +   G+ +++
Sbjct: 155 GYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDA 214

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +++   +       P+   YN ++   C + +   A   + +M    + PDV TYN +  
Sbjct: 215 LEIFRNIP-----SPDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILID 269

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              +  + D+A E++ EM   GV P+  T   I+ G CK GK + A      M E    P
Sbjct: 270 GLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRP 329

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCK 373
           +   +N LI G  +   +  VD    L+ EF  +   PDV+TYS + +     G +D+  
Sbjct: 330 SCCTYNTLISGLCK---QQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 386

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+  +M   G  P+   Y+ L  G  +  + EKA ELL +++ SGF P+VV +T I+ G 
Sbjct: 387 ELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGL 446

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C +G +D+A+++ + M + G +P++ T+  LM G     +   A  I + M +       
Sbjct: 447 CKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADA 506

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYP 553
             ++ L      +  TKEA++++  I+     +   A  D         Y KE      P
Sbjct: 507 LAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMD--------GYCKEGRLDEIP 558

Query: 554 NLLQ-------IPNV 561
           N+ +       +PN+
Sbjct: 559 NVFEDMACRGCVPNI 573



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 198/419 (47%), Gaps = 4/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L +  K  +A  + + +++ G  P  VT+ +++  L    +F   HS+++ + E  
Sbjct: 267 LIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERN 326

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P    +N +I+   +  N++ A D   +   SG  P   TY+ L  G    G+ +E+ 
Sbjct: 327 CRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAF 386

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+  MS +G   PNL TYN L+   C      +A+ ++  + +SG  PDVVTY  I   
Sbjct: 387 ELVKEMSGKG-CTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDG 445

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G  D+A +++  M   G  P+  T   ++ G C+ G++ EA    + M       +
Sbjct: 446 LCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTAD 505

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +  L+ G+ +        E   ++   R  P +  Y+ +M+ +   G +D+   +F+
Sbjct: 506 ALAYVSLVNGYCK---SSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDEIPNVFE 562

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM   G  P+   Y+I+  G  +  + ++A   L +M  +G  P+VV +  II G     
Sbjct: 563 DMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKAS 622

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
               A +V D+M + G+ P+  T+ TLM  + +  +   A  IL+ M   GV P   T+
Sbjct: 623 KPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTY 681



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 209/411 (50%), Gaps = 14/411 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   +  + +EAQ + +  I G   P +  Y  L+     + R + I ++   +   G
Sbjct: 512 LVNGYCKSSRTKEAQKVVDG-IRG--TPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRG 568

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+   +N V++   + G ++EA      M  +G  P   +YN +I G   A KP+E+ 
Sbjct: 569 CVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEAR 628

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++LD M + G + P+  TYN L+  +C E+   +A  ++  M  +G+ PD VTYNT+ + 
Sbjct: 629 QVLDQMIQAG-IPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISG 687

Query: 258 YAQNGEADQAEEVIVEMEHNG-VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            +Q      A E++ EM  NG V     T   II   CKEG +K+AL     M  +GV  
Sbjct: 688 LSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEA 747

Query: 317 NLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           N V +N+    F++ + ++G +DE  +L+ E     D ++Y+T++     A  +D+  ++
Sbjct: 748 NTVTYNI----FIDRLCKEGRLDEASSLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKL 803

Query: 376 FDDM-GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
             +M    G+   +H +++L   + + +  ++A  LL  M++ G  P+V+ +  +I+  C
Sbjct: 804 AREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLC 863

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
               +D+A E+FD+M   G+  +  ++  L++G        R +E LQ+++
Sbjct: 864 KLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLC---GQGRGKEALQVLE 911



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 209/479 (43%), Gaps = 38/479 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L + L +RG+  EA  +   +   G  P+LVTY TL+  L    +    + ++ 
Sbjct: 366 VVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLE 425

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G  PD + +  +++   + G +++A+     M + G TP+  TY  L++G    G
Sbjct: 426 SLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTG 485

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+  +   M  + +   +   Y  LV  +C      EA  V+  +  +   P +  Y
Sbjct: 486 RVDEAHHIFKEMVSK-DCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGT---PYIDVY 541

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y + G  D+   V  +M   G  PN +T  I++ G CK GK+ EA  F  +M  
Sbjct: 542 NALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS 601

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P++V +N++I G  +        +VL  M +  + PD +TY+T+M  +      D 
Sbjct: 602 AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 661

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG-FHPNVVIFTTII 430
              I  +M KAG+ PD   Y+ L  G  +      A EL+  M+ +G        + TII
Sbjct: 662 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTII 721

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE---------------------------- 462
              C +G + +A+ + D M  HGV  N  T+                             
Sbjct: 722 DRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDE 781

Query: 463 ----TLMWGYSEARQPWRAEEILQIMKAF-GVHPQKSTFLLLAEARRATGLTKEAKRIL 516
               T++ G  +A Q  RA ++ + M A  G+     TF LL +A   T    EA  +L
Sbjct: 782 VSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLL 840



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/492 (23%), Positives = 224/492 (45%), Gaps = 50/492 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++ L + G+  +A  +   +++ G  PS++TYT L+  L    R +  H I  
Sbjct: 436 VVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFK 495

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++       D++ + +++N + +S   +EA      ++    TP    YN L+ GY   G
Sbjct: 496 EMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGYCKEG 552

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E   + + M+  G V PN++TYN+++   C    + EA+  +  M ++G  PDVV+Y
Sbjct: 553 RLDEIPNVFEDMACRGCV-PNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSY 611

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N I     +  +  +A +V+ +M   G+ P+  T   +++ +CKE +  +A+   + M +
Sbjct: 612 NIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIK 671

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI----TYSTIMNAWSTAG 367
            GV P+ V +N LI G  +  +R G  +   LM E   N  V+    TY+TI++     G
Sbjct: 672 AGVDPDNVTYNTLISGLSQT-NRLG--DAYELMHEMLRNGCVVSACTTYNTIIDRLCKEG 728

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            + +   + D M   G++ +   Y+I      +E   ++A  LL  M       + V +T
Sbjct: 729 CLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYT 785

Query: 428 TIISGWCSDGSMDRA-----------------------IEVFDK-------------MCE 451
           T+I G C    +DRA                       I+ F K             M +
Sbjct: 786 TVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQ 845

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            G SP++ T+  ++    +  +  +A E+   M   G+     ++ +L       G  KE
Sbjct: 846 RGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKE 905

Query: 512 AKRILSKIKNKE 523
           A ++L ++ + +
Sbjct: 906 ALQVLEEMASSD 917



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 168/355 (47%), Gaps = 8/355 (2%)

Query: 68  SCR----TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +CR     +++   +M+ L + GK  EA     ++   G  P +V+Y  ++  L    + 
Sbjct: 565 ACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKP 624

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                ++ Q+ + G+ PD++ +N ++  F +    ++A+     M ++G+ P   TYNTL
Sbjct: 625 KEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTL 684

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G     +  ++ +L+  M R G V     TYN ++   C E  + +A  +M  M   G
Sbjct: 685 ISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHG 744

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++ + VTYN       + G  D+A  ++ EM+    + +  T   +I G CK  ++  A 
Sbjct: 745 VEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVSYTT---VIIGLCKAEQLDRAS 801

Query: 304 RFARTMKEY-GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           + AR M    G+      FNLLI  F +    D    +L LM +   +P VITY+ ++  
Sbjct: 802 KLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITC 861

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
                 +DK  E+FD+M   GI   + +Y++L  G   +   ++A ++L  M  S
Sbjct: 862 LCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASS 916



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/179 (25%), Positives = 90/179 (50%), Gaps = 5/179 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ-VEEN 136
            ++ L + G+  EA ++   L E       V+YTT++  L   ++ +    +  + V   
Sbjct: 755 FIDRLCKEGRLDEASSL---LSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVK 811

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G+   S  FN +I+AF+++  ++EA+     M + G +P+  TYN +I       K +++
Sbjct: 812 GLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKA 871

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
            +L D M+  G V  ++ +Y VL+   C +    EA  V+ +MA+S  + D + +  +A
Sbjct: 872 WELFDEMAVRGIVASSV-SYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDVA 929



 Score = 46.6 bits (109), Expect = 0.044,   Method: Compositional matrix adjust.
 Identities = 29/128 (22%), Positives = 58/128 (45%)

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           +++++   R ++P+ A    +   + GF  +       +     +GS DR   +F++M +
Sbjct: 94  AVVSRVLQRLKDPQTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLD 153

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            G +P+  T+  ++    +  Q  +A  +L   K  G  P+ S + +L  A   TG  K+
Sbjct: 154 AGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKD 213

Query: 512 AKRILSKI 519
           A  I   I
Sbjct: 214 ALEIFRNI 221


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 215/432 (49%), Gaps = 2/432 (0%)

Query: 66  KESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           +ESCR    + + L++ L E G+ +EA  +   ++E G +PS  TYT L+ A       +
Sbjct: 192 EESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTD 251

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
               ++ ++      P+   +  +I+     G +EEA   F KM + GL P   T+N LI
Sbjct: 252 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALI 311

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            GY   G    + +LL +M + GN KPN+RTYN L+   C      +A+ ++ ++  +G+
Sbjct: 312 NGYCKEGWVVSAFQLLSVMEK-GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 370

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            PD VTYN +   + + G+ + A  +   M   G++P+G T   +I G CK G++++A  
Sbjct: 371 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 430

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
              +M + G+  + V F  LI G  +I     V  +   M E R      T++  ++A  
Sbjct: 431 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 490

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
               +++   +   M K G+ P    ++IL +G+ R  E   + ++L  M ++G  PNV 
Sbjct: 491 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 550

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +T II+G C++G ++ A  +   M   GVSPN  T+  L+  + +A +  RA +I+  M
Sbjct: 551 TYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 610

Query: 485 KAFGVHPQKSTF 496
              G  P    +
Sbjct: 611 VKNGCQPNSHIY 622



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 223/486 (45%), Gaps = 38/486 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV-EEN 136
           ++N+L + G  Q A+     ++  G        T+L+ A   +        +  ++ +E 
Sbjct: 134 VVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEE 193

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
              P+S+ ++ +I+   E+G +EEA     +M E G  P+T TY  LIK     G  +++
Sbjct: 194 SCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 253

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +K+LD M+ +  V PN+ TY +L+   C E  I EA  V  KM   G+ P ++T+N +  
Sbjct: 254 MKMLDEMATKACV-PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALIN 312

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRT--------C---------------------- 286
            Y + G    A +++  ME    +PN RT        C                      
Sbjct: 313 GYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLP 372

Query: 287 -----GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
                 I++ G+CKEG++  A     +M   G+ P+   F  LI G  ++   +  + +L
Sbjct: 373 DRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGIL 432

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M +  ++ D +T++ +++     G       +F++M +      AH ++       ++
Sbjct: 433 GSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKD 492

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            +  +A  +L  M++ G  P+VV  T +I G C  G    ++++ ++M + G SPN+ T+
Sbjct: 493 YKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTY 552

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK-IK 520
             ++ G     +   AE IL  M +FGV P   T+ +L +A    G    A +I+S  +K
Sbjct: 553 TIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK 612

Query: 521 NKERTN 526
           N  + N
Sbjct: 613 NGCQPN 618



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/531 (21%), Positives = 232/531 (43%), Gaps = 55/531 (10%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C  + +   L+N   + G    A  + + + +G  KP++ TY  L+  L    +      
Sbjct: 301 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 360

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++ +V +NG+ PD + +N +++ F + G +  A + F  M  +GL P   T+  LI G  
Sbjct: 361 LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLC 420

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G+ E++  +L  M ++G +  +  T+  L+   C      +   +   M  +      
Sbjct: 421 KLGRLEQANGILGSMVKKG-ISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 479

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            T+N    A  ++ + ++A  ++ +M   G+ P+  T  I+I G+C+ G+   +L+    
Sbjct: 480 HTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 539

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           MK+ G  PN+  + ++I G       +  + +L  M  F V+P+  TY+ ++ A   AG 
Sbjct: 540 MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR 599

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL------------------ 410
           +D+  +I   M K G +P++H YS L  G+V       A  L                  
Sbjct: 600 LDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDN 659

Query: 411 ---------LMTM---------IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
                    LM +         I+    P   ++  ++ G C +G +  A ++   M +H
Sbjct: 660 NCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKH 719

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G+ P+ K   +++  Y +  +     E ++++      P  +++  +    R  G  +EA
Sbjct: 720 GLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEA 778

Query: 513 KRILSKIKNKERTNE-----------MEAEEDIP------VESLERLYHKE 546
           ++++S +       E           M+ EED P      ++++E++++KE
Sbjct: 779 QKLVSDLVRHTGIEEEVEVTPSIEFLMKEEEDDPDKCLKLIKAIEQVHYKE 829



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 159/371 (42%), Gaps = 3/371 (0%)

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
           SE+G + + M     M E G   +   Y+TL+           +  +   M  EG V   
Sbjct: 70  SENG-VVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGG 128

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
           +  Y  +V A C    +  A     K+   G   D     ++  A  +  +  +A  V  
Sbjct: 129 I-DYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFE 187

Query: 273 EM-EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
           +M +    +PN  T  I+I G C+ G+++EA +  + M E G  P+   + +LIK   +I
Sbjct: 188 KMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 247

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
              D   ++L  M      P+V TY+ +++     G +++   +F  M K G+ P    +
Sbjct: 248 GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITF 307

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + L  GY +E     A +LL  M +    PN+  +  ++ G C      +A  +  ++ +
Sbjct: 308 NALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 367

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
           +G+ P+  T+  L+ G+ +  Q   A  I   M + G+ P   TF  L +     G  ++
Sbjct: 368 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 427

Query: 512 AKRILSKIKNK 522
           A  IL  +  K
Sbjct: 428 ANGILGSMVKK 438


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 113/406 (27%), Positives = 199/406 (49%), Gaps = 2/406 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +MN   E G+  +A+ + ++L   G  P++VTYT L+     +K       ++ ++ +N 
Sbjct: 284 VMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNK 343

Query: 138 -MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            +  D   F AVIN + + G ME+A     +M +S L      YN +I GY   G+  E+
Sbjct: 344 QLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEA 403

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
             +L  M+  G V+P+  +YN LV  +C +  + +A+   + M  +G     +TYN +  
Sbjct: 404 HNILHEMTGVG-VRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLK 462

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            +   G  D A  +   M   G+ PN  +C  ++ G+ K GK ++AL   +     G+  
Sbjct: 463 GFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAK 522

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N   FN +I G  +I      +E++  MK++R  PD+ITY T+ + +   G MD+   I 
Sbjct: 523 NTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRIL 582

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           +++   G  P    ++ L  G+   ++  K  ++L  M   G  PN V +  +I+GWC +
Sbjct: 583 NELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKE 642

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           G +  A  ++ +M E G+ PNL    +L+  +    +   A  +LQ
Sbjct: 643 GDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQ 688



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/537 (22%), Positives = 226/537 (42%), Gaps = 95/537 (17%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N   + G+ ++A  + N +++   + +L  Y  ++       R    H+I+ ++   G
Sbjct: 355 VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVG 414

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD+  +N++++ + + G M +A +T+  M  +G   TT TYN L+KG+   G  ++++
Sbjct: 415 VRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDAL 474

Query: 198 KLLDLMSREG----------------------------------NVKPNLRTYNVLVRAW 223
           +L  LM ++G                                   +  N  T+N ++   
Sbjct: 475 RLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGL 534

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE--------------- 268
           C  + + EA  ++ KM      PD++TY T+ + Y + G+ D+A                
Sbjct: 535 CKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTI 594

Query: 269 --------------------EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
                               +++ EM + G+ PN    G +I+G+CKEG +  A      
Sbjct: 595 EFFNSLITGHFIAKQHGKVNDILFEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLE 654

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV--------------- 353
           M E G+ PNL I + L+  F      D  + VL  +    + PD+               
Sbjct: 655 MIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFID 714

Query: 354 -----------ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
                      I ++ ++      G ++  K +  D+   G   D   YS L  G     
Sbjct: 715 TVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASG 774

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             + A +L  TM+  G  PN+V + ++I G C  G + RA+ +F K+   G+SPN  T+ 
Sbjct: 775 FVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYN 834

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           TL+  + +      A ++ Q M   G+HP   T+ +L       G  +EA ++L ++
Sbjct: 835 TLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQM 891



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 220/469 (46%), Gaps = 45/469 (9%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           N+ SC T      L++   + GK ++A  ++   +  G   +  T+ T++  L   +R  
Sbjct: 488 NEISCST------LLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMP 541

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
               ++ ++++    PD I +  + + + + G+M+ A     +++  G  PT   +N+LI
Sbjct: 542 EAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLI 601

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G+ IA +  +   +L  MS  G + PN   Y  L+  WC E ++  A+N+  +M   G+
Sbjct: 602 TGHFIAKQHGKVNDILFEMSNRG-LSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGL 660

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN--------GRTCG--------- 287
            P++   +++ + + + G+ D+A  V+  +    + P+        G+            
Sbjct: 661 VPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTDMIPDISAPRLEIGKVANFIDTVAGGN 720

Query: 288 ---------IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
                    I+I G CK G+I++A      +K+ G   +   ++ LI G       D   
Sbjct: 721 HHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAF 780

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           ++   M    + P+++TY++++     +G + +   +F  +   GI P+A  Y+ L   +
Sbjct: 781 DLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKH 840

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            ++    +A +L   MIE G HP V  ++ +I+G C+ G M+ AI++ D+M E+ V PN 
Sbjct: 841 CKDGYITEAFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNY 900

Query: 459 KTFETLMWGYSEARQPWRAEEI-LQIMKAFGVHPQKSTFLLLAEARRAT 506
            T+ TL+ GY       R E + + IM        +ST ++ A  RRA 
Sbjct: 901 VTYWTLIQGYV------RCESVDVPIMPL-----DQSTIVVKASPRRAV 938



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/434 (22%), Positives = 205/434 (47%), Gaps = 1/434 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M    CR ++RS   ++N L + G      A+F  +   G  P   T   +  A    K 
Sbjct: 199 MRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKG 258

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                  + ++ + G++ + + ++AV+N + E G   +A      +   G +P   TY  
Sbjct: 259 VVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTL 318

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+KGY      EE+  ++  + +   +  +   +  ++  +C    + +A  ++++M  S
Sbjct: 319 LVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDS 378

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            ++ ++  YN +   Y + G   +A  ++ EM   GV+P+  +   ++ GYCK+G + +A
Sbjct: 379 RLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKA 438

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                TM   G     + +N L+KGF  +   D    +  LM +  + P+ I+ ST+++ 
Sbjct: 439 FETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDG 498

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +  +G  +K   ++ +    G+  +   ++ +  G  + +   +AEEL+  M +    P+
Sbjct: 499 FFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPD 558

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           ++ + T+ SG+C  G MDRA  + +++   G +P ++ F +L+ G+  A+Q  +  +IL 
Sbjct: 559 IITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILF 618

Query: 483 IMKAFGVHPQKSTF 496
            M   G+ P    +
Sbjct: 619 EMSNRGLSPNTVAY 632



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 197/432 (45%), Gaps = 2/432 (0%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           KE   +  S   L+ +L   G+   A  +F+ +   G + S+ +  ++L  L       +
Sbjct: 167 KEFSFSAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGA 226

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
             ++  Q++  G  PD      +  A+ +   +  A++   +M + G+      Y+ ++ 
Sbjct: 227 TVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMN 286

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-M 244
           GY   G+  ++ ++LD +   G   PN+ TY +LV+ +CNEKN+ EA  V+ ++  +  +
Sbjct: 287 GYCEVGQTNDARRMLDSLPGRG-FSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQL 345

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
             D   +  +   Y Q G  + A  ++ EM  + +Q N     I+I+GYCK G++ EA  
Sbjct: 346 VVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHN 405

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               M   GV P+   +N L+ G+ +    +   E    M         +TY+ ++  + 
Sbjct: 406 ILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFC 465

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
           + G +D    ++  M K GI P+  + S L  G+ +  + EKA  L    +  G   N  
Sbjct: 466 SLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTT 525

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            F T+I+G C    M  A E+ DKM +    P++ T+ TL  GY +     RA  IL  +
Sbjct: 526 TFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNEL 585

Query: 485 KAFGVHPQKSTF 496
           +  G  P    F
Sbjct: 586 ENLGFAPTIEFF 597



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/447 (22%), Positives = 212/447 (47%), Gaps = 6/447 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSL--VTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           ++ SL+    P  A  +F +L+E   + S    ++  LL AL    + +    +  ++  
Sbjct: 144 ILASLLSARPP--APPLFPHLVEVYKEFSFSAASFDLLLRALANAGQLDGALQVFDEMRT 201

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G        N+++N  +++G++   +  F +M+ +G  P   T   + K Y        
Sbjct: 202 LGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVH 261

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +++ ++ M++ G V+ NL  Y+ ++  +C      +A  ++  +   G  P++VTY  + 
Sbjct: 262 ALEFVEEMTKMG-VEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLV 320

Query: 256 TAYAQNGEADQAEEVIVEMEHNG-VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             Y      ++AE V+ E+  N  +  +    G +I+GYC+ G++++A R    M +  +
Sbjct: 321 KGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRL 380

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
             NL ++N++I G+ ++        +L  M    V PD  +Y+++++ +   G M+K  E
Sbjct: 381 QVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFE 440

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
            ++ M + G       Y+ L KG+      + A  L   M++ G  PN +  +T++ G+ 
Sbjct: 441 TYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFF 500

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G  ++A+ ++ +    G++ N  TF T++ G  +  +   AEE++  MK +   P   
Sbjct: 501 KSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDII 560

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKN 521
           T+  L       G    A RIL++++N
Sbjct: 561 TYRTLFSGYCKIGDMDRASRILNELEN 587



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 80/204 (39%), Gaps = 36/204 (17%)

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           F+LL++        DG  +V   M+       + + ++I+N  +  G +     +F+ M 
Sbjct: 176 FDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQ 235

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
           +AG  PD    +I+AK Y                                   C    + 
Sbjct: 236 RAGALPDKFTVAIMAKAY-----------------------------------CKVKGVV 260

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            A+E  ++M + GV  NL  +  +M GY E  Q   A  +L  +   G  P   T+ LL 
Sbjct: 261 HALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLV 320

Query: 501 EARRATGLTKEAKRILSKI-KNKE 523
           +        +EA+ ++ +I KNK+
Sbjct: 321 KGYCNEKNMEEAEGVVQEIRKNKQ 344


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 213/442 (48%), Gaps = 1/442 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L + G  + A+A+F ++ E G     V YTTL+  L       +   +  ++ E  
Sbjct: 508 LVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKN 567

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD++ +N  IN     G   EA     +M+ +GL P  +TYNT+I      GK  +++
Sbjct: 568 LSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKAL 627

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL  M R  ++KPNL TY  LV        + +A  ++++MA++G  P  +T+  +  A
Sbjct: 628 KLLKEMKRN-SIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQA 686

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            + +   D   E+   M   G+  +      ++   C  G  + A      M   G+ P+
Sbjct: 687 CSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPD 746

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + FN LI G  +    D    + A M    ++P++ T++T++    +AG + +   +  
Sbjct: 747 TITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLS 806

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM K G++P+   Y IL  GY ++    +A  L   M+  GF P    + +++S +   G
Sbjct: 807 DMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAG 866

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M++A E+F +M   GV     T++ L+ G+S+ R       +L+ MK  G  P K T  
Sbjct: 867 MMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTIS 926

Query: 498 LLAEARRATGLTKEAKRILSKI 519
            ++ A    G+T EA+R+L  +
Sbjct: 927 SMSRAFSRPGMTGEARRLLKTL 948



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 219/451 (48%), Gaps = 1/451 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +++ L++ L   G+  EA A+F  + + G  P+ VTY TL+ +L   +R +    ++ 
Sbjct: 292 VVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLG 351

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+  D + + A+++   + G +EEA D     +   +TP   TY  L+  +  AG
Sbjct: 352 EMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAG 411

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + + ++L L   E +V PN+ T++ ++        + +A + M KM  SG+ P+VVTY
Sbjct: 412 NIDGAEQVL-LQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTY 470

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   + +    + A +V  +M H GV+ N      +++G  K G I+ A    + M E
Sbjct: 471 GTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDE 530

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  + V +  L+ G  +  +     +V   + E  ++PD + Y+  +N   T G   +
Sbjct: 531 RGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSE 590

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            K    +M   G++PD   Y+ +     RE +  KA +LL  M  +   PN++ +TT++ 
Sbjct: 591 AKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTLVV 650

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G    G + +A  + ++M   G +P   T + ++   S +R+P    EI ++M   G+H 
Sbjct: 651 GLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGLHA 710

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             + +  L       G+ + A  +L ++  +
Sbjct: 711 DITVYNTLVHVLCCHGMARNATVVLDEMLTR 741



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 144/583 (24%), Positives = 258/583 (44%), Gaps = 60/583 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ-VEEN 136
            + +L E+G  + A  + + + + G     VT +T L  L          ++    V   
Sbjct: 121 FLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAAALAEMLVRGR 180

Query: 137 GMDP-DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           G+D  D + +NA+I+ + +  +M  A+    +M   G+      YN+L+ G+  +G  + 
Sbjct: 181 GIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVAGFFHSGDADA 240

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++++++ M  +G V+PN+ TY  L+  +C  K + EA+++   M  SG+ PDVVT + + 
Sbjct: 241 ALEVVERMKADG-VEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLPDVVTLSALV 299

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK-------------------- 295
               ++G+  +A  +  EM+  GV PN  T   +I    K                    
Sbjct: 300 DGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGLLGEMVSRGVV 359

Query: 296 ---------------EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
                          EGKI+EA    R  +   + PN V + +L+       + DG ++V
Sbjct: 360 MDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCRAGNIDGAEQV 419

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L  M+E  V P+V+T+S+I+N     G + K  +    M  +GI P+   Y  L  G+ +
Sbjct: 420 LLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVVTYGTLIDGFFK 479

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
            Q  E A ++   M+  G   N  +  ++++G   +G+++ A  +F  M E G+  +   
Sbjct: 480 FQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVN 539

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           + TLM G  +      A ++ Q +    + P    + +        G   EAK  L +++
Sbjct: 540 YTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMR 599

Query: 521 N------KERTNEMEA---EEDIPVESLERLYHKEATTASY-PNLLQIPNVVSSDQKGSA 570
           N      +   N M A    E    ++L+ L  KE    S  PNL+    +V    +  A
Sbjct: 600 NTGLEPDQATYNTMIAARCREGKTSKALKLL--KEMKRNSIKPNLITYTTLVVGLLE--A 655

Query: 571 AALKKGRMLLRDADSSLECSWFATTSM---YLSHSCKSGARLP 610
             +KK + LL +  S    + FA TS+    +  +C SG+R P
Sbjct: 656 GVVKKAKFLLNEMAS----AGFAPTSLTHQRVLQAC-SGSRRP 693



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/331 (25%), Positives = 150/331 (45%), Gaps = 1/331 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  +A  +   +     KP+L+TYTTL+  L           +++++   G  P S+  
Sbjct: 621 GKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTH 680

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             V+ A S S   +  ++    M  +GL    + YNTL+      G    +  +LD M  
Sbjct: 681 QRVLQACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLT 740

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G + P+  T+N L+   C   ++  A+ +  +M   G+ P++ T+NT+       G   
Sbjct: 741 RG-IAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIG 799

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A+ V+ +M+  G++PN  T  I+++GY K+    EALR    M   G  P    +N L+
Sbjct: 800 EADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLM 859

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
             F +    +   E+ + MK   V     TY  ++N WS      + + +  DM + G K
Sbjct: 860 SDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFK 919

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           P     S +++ + R     +A  LL T+ +
Sbjct: 920 PSKGTISSMSRAFSRPGMTGEARRLLKTLFK 950



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/357 (24%), Positives = 160/357 (44%), Gaps = 34/357 (9%)

Query: 1   MGKFAEGKAFLQTDDKYQSGSTIVKKGWGQMIPA--KKNNPGEKKQLYSNSKPTDSQPQ- 57
           +GKF+E K+FL+  +   +G    +  +  MI A  ++    +  +L    K    +P  
Sbjct: 585 LGKFSEAKSFLK--EMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNL 642

Query: 58  -THCSFCMNKESCRTVRSMTKLMNSLIERG-------------------KPQEAQAIFNN 97
            T+ +  +       V+    L+N +   G                   +P     I   
Sbjct: 643 ITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHEL 702

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           ++  G    +  Y TL+  L       +   ++ ++   G+ PD+I FNA+I    +S +
Sbjct: 703 MMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSH 762

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           ++ A   + +M   GL+P  +T+NTL+ G   AG+  E+  +L  M + G ++PN  TY+
Sbjct: 763 LDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVG-LEPNNLTYD 821

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +LV  +  + N  EA  +  +M + G  P   TYN++ + +A+ G  +QA+E+  EM+  
Sbjct: 822 ILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRR 881

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
           GV     T  I+++G+ K     E     + MKE G  P+        KG +  M R
Sbjct: 882 GVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPS--------KGTISSMSR 930



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/317 (24%), Positives = 143/317 (45%), Gaps = 4/317 (1%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V  +  +YN+ + A   + +   A  V+ +M   G+  D VT +T      + G   +A 
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170

Query: 269 EVIVEMEHNGVQPNGRTC---GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
             + EM   G   +G        +I GYCK   +  AL     M   GV  ++V +N L+
Sbjct: 171 -ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLV 229

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF    D D   EV+  MK   V P+V+TY+ ++  +     MD+   +++ M ++G+ 
Sbjct: 230 AGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVL 289

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD    S L  G  R+ +  +A  L   M + G  PN V + T+I           ++ +
Sbjct: 290 PDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRGSESLGL 349

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
             +M   GV  +L  +  LM    +  +   A+++L+  ++  + P   T+ +L +A   
Sbjct: 350 LGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHCR 409

Query: 506 TGLTKEAKRILSKIKNK 522
            G    A+++L +++ K
Sbjct: 410 AGNIDGAEQVLLQMEEK 426



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 86/171 (50%), Gaps = 7/171 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   L+  L   G+  EA  + +++ + G +P+ +TY  L+      K+ N + ++  
Sbjct: 782 IATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILVTGYA--KKSNKVEALRL 839

Query: 132 QVE--ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG- 188
             E    G  P +  +N++++ F+++G M +A + F +MK  G+  T+STY+ L+ G+  
Sbjct: 840 YCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSK 899

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           +    E  + L D+  +E   KP+  T + + RA+       EA  ++  +
Sbjct: 900 LRNGIEVRILLKDM--KELGFKPSKGTISSMSRAFSRPGMTGEARRLLKTL 948


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 215/454 (47%), Gaps = 36/454 (7%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G  PS+ T   +L +L  +++ +   S    +   G+ PD   FN ++NA  E G  + A
Sbjct: 135 GLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNA 194

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
                KM+ESG+ PT  TYNTL+  Y   G+ + + +L+D M+ +G +  ++ TYNV + 
Sbjct: 195 GFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMASKG-IGVDVCTYNVFID 253

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C +    + + ++ +M  + + P+ +TYNT+ + + + G+ + A +V  EM    + P
Sbjct: 254 NLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLP 313

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N  T   +I+G+C  G I EALR    M  +G+ PN V +  L+ G  +  +   V  +L
Sbjct: 314 NSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSIL 373

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M+   V    I+Y+ +++     G +++  ++ DDM K  + PD   +S+L  G+ R 
Sbjct: 374 ERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRV 433

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF--------------- 446
            +   A+E++  M ++G  PN ++++T+I  +C  G +  A+  +               
Sbjct: 434 GKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTC 493

Query: 447 --------------------DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
                               + M   G+ PN  TF+ ++ GY  +    +A  +   M +
Sbjct: 494 NVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNS 553

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           FG  P   T+  L +     G   EA +   +++
Sbjct: 554 FGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLR 587



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 196/402 (48%), Gaps = 1/402 (0%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           K  C  V +   L+N+L ERGK + A  +   + E G  P+ VTY TLL     + R+ +
Sbjct: 169 KGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKA 228

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              ++  +   G+  D   +N  I+         +      +M+ + + P   TYNTLI 
Sbjct: 229 ASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLIS 288

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G+   GK E + K+ D MS   N+ PN  TYN L+   C   NI EA  +M  M + G++
Sbjct: 289 GFVREGKIEVATKVFDEMSLF-NLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLR 347

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P+ VTY  +     +N E      ++  M   GV+ +  +   +I G CK G ++EA++ 
Sbjct: 348 PNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQL 407

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              M +  V+P++V F++LI GF  +   +   E++  M +  + P+ I YST++  +  
Sbjct: 408 LDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCK 467

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G++ +    +  M  +G   D    ++L   + R  + E+AE  +  M   G  PN V 
Sbjct: 468 MGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVT 527

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           F  II+G+ + G   +A  VFDKM   G  P+L T+  L+ G
Sbjct: 528 FDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKG 569



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/368 (26%), Positives = 169/368 (45%), Gaps = 1/368 (0%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           F+ +I     +  + +A+ TF+ M   GL P+  T N ++       K +        M 
Sbjct: 108 FDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGML 167

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
            +G + P++ T+N+L+ A C       A  ++ KM  SG+ P  VTYNT+   Y + G  
Sbjct: 168 AKG-ICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRY 226

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
             A ++I  M   G+  +  T  + I   C++ +  +     + M+   V+PN + +N L
Sbjct: 227 KAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTL 286

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I GFV     +   +V   M  F + P+ ITY+T++    T G + +   + D M   G+
Sbjct: 287 ISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGL 346

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           +P+   Y  L  G  +  E      +L  M   G   + + +T +I G C +G ++ A++
Sbjct: 347 RPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQ 406

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + D M +  V+P++ TF  L+ G+    +   A+EI+  M   G+ P    +  L     
Sbjct: 407 LLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYC 466

Query: 505 ATGLTKEA 512
             G  KEA
Sbjct: 467 KMGYLKEA 474



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/452 (22%), Positives = 206/452 (45%), Gaps = 4/452 (0%)

Query: 79   MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
            + S    G   +A A+ N ++     P   TYT L+A L  + +  +   +  +  E G+
Sbjct: 602  LTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAALLLSGKAIEKGL 661

Query: 139  -DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              P+   + ++++   + G+   A+  F +M    + P T  +N +I  Y   GK  +  
Sbjct: 662  LSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVN 721

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             +L  M +  N+  NL TYN+L+  +     +   + +   M   G  PD  +++++   
Sbjct: 722  DILSTM-KSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILG 780

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            Y Q+   D A +++  +   G   +  T  ++I+ +C+  ++K+A    + M ++ V PN
Sbjct: 781  YCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPN 840

Query: 318  LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            +  +N L  G +   D      VL ++ E    P    Y T++N     G +    ++ D
Sbjct: 841  VDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQD 900

Query: 378  DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +M   GI     A S + +G    ++ E A  +L  M+E    P V  FTT++  +C + 
Sbjct: 901  EMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEA 960

Query: 438  SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ +A+E+   M    V  ++  +  L+ G         A ++ + MK   + P  S ++
Sbjct: 961  NVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYI 1020

Query: 498  LLAEARRATGLTKEAKRILSKIKNKE--RTNE 527
            +L ++  A     E++++L  I+++E  R N+
Sbjct: 1021 VLIDSFCAGNYQIESEKLLRDIQDRELMRLNQ 1052



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 98/419 (23%), Positives = 184/419 (43%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N     G   +A ++F+ +   GH PSL TY  LL  L I    N       ++    
Sbjct: 531 IINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIP 590

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              D++ FN  + +   SGN+ +A+    +M  +   P   TY  LI G    GK   ++
Sbjct: 591 NAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAAL 650

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L      +G + PN   Y  LV       +   A  +  +M    ++PD V +N I   
Sbjct: 651 LLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQ 710

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y++ G+  +  +++  M+   +  N  T  I++ GY K   +       + M  +G  P+
Sbjct: 711 YSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPD 770

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              ++ LI G+ +    D   ++L  +       D  T++ ++  +     M K  E+  
Sbjct: 771 KFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVK 830

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M +  + P+   Y+ L  G +R  +  KA  +L  ++ESG  P    + T+I+G C  G
Sbjct: 831 QMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVG 890

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           ++  A+++ D+M   G+S +      ++ G + +++   A  +L +M    + P  +TF
Sbjct: 891 NIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATF 949



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/360 (22%), Positives = 173/360 (48%), Gaps = 1/360 (0%)

Query: 76   TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
            T L++ L++ G  + A  IF  ++    +P  V +  ++   + + + + ++ I+S ++ 
Sbjct: 670  TSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKS 729

Query: 136  NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
              +  +   +N +++ +++   M      +  M   G  P   ++++LI GY  +   + 
Sbjct: 730  KNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDV 789

Query: 196  SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
            ++K+L  ++ EG+V     T+N+L+  +C    + +A+ ++ +M    + P+V TYN + 
Sbjct: 790  AIKILRWITLEGHVIDRF-TFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALF 848

Query: 256  TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
                +  +  +A  V+  +  +G  P  +    +I+G C+ G IK A++    MK  G+ 
Sbjct: 849  NGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGIS 908

Query: 316  PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
             + V  + +++G       +    VL LM E ++ P V T++T+M+ +     + K  E+
Sbjct: 909  SHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALEL 968

Query: 376  FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
               M    +K D  AY++L  G     + E A +L   M +    PN  I+  +I  +C+
Sbjct: 969  RSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCA 1028



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 137/302 (45%)

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
            +++L+R     + + +A    + M   G+ P V T N +  +  +  + D        M
Sbjct: 107 VFDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGM 166

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G+ P+  T  I+++  C+ GK K A    R M+E GV+P  V +N L+  + +    
Sbjct: 167 LAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRY 226

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
               +++  M    +  DV TY+  ++         K   +   M +  + P+   Y+ L
Sbjct: 227 KAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTL 286

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G+VRE + E A ++   M      PN + + T+I+G C+ G++  A+ + D M  HG+
Sbjct: 287 ISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGL 346

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            PN  T+  L+ G  +  +      IL+ M+  GV     ++  + +     G+ +EA +
Sbjct: 347 RPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQ 406

Query: 515 IL 516
           +L
Sbjct: 407 LL 408



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 121/297 (40%), Gaps = 34/297 (11%)

Query: 66   KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
            K  C  + +   L++   +R        ++ ++I  G  P   ++ +L+      K F+ 
Sbjct: 730  KNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSFDV 789

Query: 126  IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
               I+  +   G   D   FN +I  F E   M++A +   +M +  + P   TYN L  
Sbjct: 790  AIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNALFN 849

Query: 186  GY-------------------GIAGKPEESVKLLDLMSREGNVKPNLR-----------T 215
            G                    G     ++ + L++ M R GN+K  ++           +
Sbjct: 850  GLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGISS 909

Query: 216  YNV----LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
            +NV    +VR   N K I  A  V+  M    + P V T+ T+   Y +     +A E+ 
Sbjct: 910  HNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELR 969

Query: 272  VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
              MEH  V+ +     ++ISG C  G I+ A +    MK+  + PN  I+ +LI  F
Sbjct: 970  SIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSF 1026



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 35/134 (26%), Positives = 64/134 (47%), Gaps = 1/134 (0%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
            +M+ ++  L    K + A  + + ++E    P++ T+TTL+     +        + S +
Sbjct: 913  AMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATFTTLMHVYCKEANVAKALELRSIM 972

Query: 134  EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E   +  D + +N +I+    +G++E A   + +MK+  L P TS Y  LI  +      
Sbjct: 973  EHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEMKQRDLWPNTSIYIVLIDSFCAGNYQ 1032

Query: 194  EESVKLL-DLMSRE 206
             ES KLL D+  RE
Sbjct: 1033 IESEKLLRDIQDRE 1046


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 217/435 (49%), Gaps = 6/435 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++   ++G  Q A      L   G  P++ TY  L+        F ++  +++++   G
Sbjct: 242 IIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARG 301

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++ +   FN VI+A  + G + +A +T  +M E G  P  +TYNT+I      G+ +E+ 
Sbjct: 302 LNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEAD 361

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           + L+  ++E  + PN  +Y  L+ A+C + +  +A  ++ ++A  G KPD+V+Y      
Sbjct: 362 EFLE-KAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHG 420

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
              +GE D A  V  +M   GV P+ +   +++SG CK G+          M +  V P+
Sbjct: 421 VVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPD 480

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           + +F  L+ GF+   + D   ++  ++    V+P ++ Y+ ++  +   G M       +
Sbjct: 481 VYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLN 540

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M      PD + YS +  GYV++ +   A ++   M++  F PNV+ +T++I+G+C   
Sbjct: 541 KMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKA 600

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M RA +VF  M    + PN+ T+ TL+ G+ +A +P +A  I ++M   G  P  +TF 
Sbjct: 601 DMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFH 660

Query: 498 LLAEARRATGLTKEA 512
            L       GLT  A
Sbjct: 661 YL-----INGLTNTA 670



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/420 (26%), Positives = 195/420 (46%), Gaps = 6/420 (1%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           V +++LL  L   + F  I  ++  ++   + P    F+A+I A+ ESG+++ A+  F  
Sbjct: 92  VAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRALQLFHT 151

Query: 168 MKE-SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR----EGNVKPNLRTYNVLVRA 222
           ++E     PT    N+L+ G   +GK + +++L D M +     G V  N  T +++V+ 
Sbjct: 152 VREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTT-SIVVKG 210

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            CN   I E   ++      G  P VV YN I   Y + G+   A   + E++  GV P 
Sbjct: 211 LCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPT 270

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T G +I+G+CK G+ +   +    M   G++ N+ +FN +I    +        E + 
Sbjct: 271 VETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMR 330

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M E    PD+ TY+T++N     G + +  E  +   + G+ P+  +Y+ L   Y ++ 
Sbjct: 331 RMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQG 390

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           +  KA  +L  + E G  P++V +   I G    G +D A+ V +KM E GV P+ + + 
Sbjct: 391 DYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYN 450

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            LM G  +  +    + +L  M    V P    F  L +     G   EA +I   I  K
Sbjct: 451 VLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRK 510



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 89/378 (23%), Positives = 178/378 (47%), Gaps = 1/378 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V+    ++++  + G   +A      + E G  P + TY T++       R       + 
Sbjct: 306 VKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLE 365

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           + +E G+ P+   +  +++A+ + G+  +A    +++ E G  P   +Y   I G  + G
Sbjct: 366 KAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHG 425

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + ++ + + M  +G V P+ + YNVL+   C          ++ +M    ++PDV  +
Sbjct: 426 EIDVALMVREKMMEKG-VFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVF 484

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   + +NGE D+A ++   +   GV P       +I G+CK GK+ +AL     MK 
Sbjct: 485 ATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKN 544

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
               P+   ++ +I G+V+  D     ++   M + +  P+VITY++++N +     M +
Sbjct: 545 VHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIR 604

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +++F  M    + P+   Y+ L  G+ +  +PEKA  +   M+ +G  PN   F  +I+
Sbjct: 605 AEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLIN 664

Query: 432 GWCSDGSMDRAIEVFDKM 449
           G  +  +    IE  D M
Sbjct: 665 GLTNTATSPVLIEEKDSM 682



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 175/378 (46%), Gaps = 15/378 (3%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T LM++  ++G   +A  +   + E G KP LV+Y   +  + +    +    +  ++
Sbjct: 378 SYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKM 437

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E G+ PD+  +N +++   ++G          +M +  + P    + TL+ G+   G+ 
Sbjct: 438 MEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGEL 497

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E++K+  ++ R+G V P +  YN +++ +C    +T+A + ++KM      PD  TY+T
Sbjct: 498 DEAIKIFKVIIRKG-VDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYST 556

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y +  +   A ++  +M  +  +PN  T   +I+G+CK+  +  A +  R MK + 
Sbjct: 557 VIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFD 616

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS---TAGFMD 370
           + PN+V +  L+ GF +    +    +  LM      P+  T+  ++N  +   T+  + 
Sbjct: 617 LVPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLI 676

Query: 371 KCKE-----------IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           + K+            F  M   G      AY+ +     +    + A+ LL  M+  GF
Sbjct: 677 EEKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGF 736

Query: 420 HPNVVIFTTIISGWCSDG 437
             + V FT ++ G C  G
Sbjct: 737 LIDSVCFTAMLHGLCHKG 754



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/238 (25%), Positives = 105/238 (44%), Gaps = 15/238 (6%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++    + GK  +A +  N +    H P   TY+T++     Q   +S   +  Q+ ++ 
Sbjct: 522 MIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHK 581

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ I + ++IN F +  +M  A   F  MK   L P   TY TL+ G+  AGKPE++ 
Sbjct: 582 FKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKAT 641

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCN---------EKNITE-----AWNVMHKMAASG 243
            + +LM   G   PN  T++ L+    N         EK+  E       +    M + G
Sbjct: 642 SIFELMLMNG-CPPNDATFHYLINGLTNTATSPVLIEEKDSMENERSLILDFFTMMLSEG 700

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
               +  YN++     ++G  D A+ ++ +M   G   +      ++ G C +GK KE
Sbjct: 701 WDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFTAMLHGLCHKGKSKE 758



 Score = 42.0 bits (97), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 24/108 (22%), Positives = 54/108 (50%), Gaps = 1/108 (0%)

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
           + F  + D + +S+++   ++     + + + ++M    +KP   A+S L   Y      
Sbjct: 83  RPFSCSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSL 142

Query: 405 EKAEELLMTMIE-SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           ++A +L  T+ E     P VV   ++++G    G +D A++++DKM +
Sbjct: 143 DRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQ 190


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 118/437 (27%), Positives = 208/437 (47%), Gaps = 2/437 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF- 144
           G+  + +  F  L   G +P    +   + A            ++ ++  +G  P + F 
Sbjct: 139 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +N VI     +G   +A++ F +M E  + P   TYNT+I G+   G  E    L D M 
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
             G +KPN  TYNVL+   C    + E   ++ +MA+  M PD  TY+ +    ++NG++
Sbjct: 259 CHG-LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDS 317

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
                +  +   NGV     TC I+++G CK+GK+  A    +++   G+ P  VI+N L
Sbjct: 318 KAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTL 377

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G+ +  + +G       MK   + PD ITY+ ++N    A  +   +++  +M   G+
Sbjct: 378 INGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGV 437

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P    ++ L   Y R  + EK   +L  M E+G  PNVV + +I++ +C +G +  A+ 
Sbjct: 438 NPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVA 497

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + D M    V PN + +  ++  Y E     +A  +++ MK+ G+ P   T+ LL +   
Sbjct: 498 ILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLC 557

Query: 505 ATGLTKEAKRILSKIKN 521
                 EA+ I++ + N
Sbjct: 558 NQSQISEAEEIINSLSN 574



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 220/455 (48%), Gaps = 11/455 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++  I+ G  +   ++ + ++  G KP+ +TY  LL+ L    R     +++ ++    
Sbjct: 237 MIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 296

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M PD   ++ + +  S +G+ +  +  F K  ++G+T    T + L+ G    GK   + 
Sbjct: 297 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAE 356

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L  +   G V P    YN L+  +C    +  A++   +M +  +KPD +TYN +   
Sbjct: 357 EVLQSLVNAGLV-PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALING 415

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +      A+++++EM+ NGV P   T   +I  Y + G++++       M+E G+ PN
Sbjct: 416 LCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 475

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKE 374
           +V +  ++  F +      + E +A++ +     V P+   Y+ I++A+   G  D+   
Sbjct: 476 VVSYGSIVNAFCK---NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFI 532

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + + M   GI P    Y++L KG   + +  +AEE++ ++      P+ V + T+IS  C
Sbjct: 533 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC 592

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G++D+A+++  +M ++G+   ++T+  L+ G   A +    E + Q M    V P  +
Sbjct: 593 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNA 652

Query: 495 TFLLLAEARRATGLTKEA----KRILSKIKNKERT 525
              ++ EA    G   +A    K +L K  N + T
Sbjct: 653 IHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDDT 687



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 72/333 (21%), Positives = 138/333 (41%), Gaps = 37/333 (11%)

Query: 193 PEESVKLLDLMSREGNVK-PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           P+ +++LL  ++ E     P+L + N+L+ A  +     +       +A++G +PD   +
Sbjct: 104 PDGALRLLSDLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAW 163

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQP-NGRTCGIIISGYCKEGKIKEALRFARTMK 310
           N    A    G+  +A  ++  M  +G  P N  +  ++I+G  + G+  +A        
Sbjct: 164 NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDA-------- 215

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                             VE+ D          M E  V P+ ITY+T+++     G ++
Sbjct: 216 ------------------VEVFDE---------MTERAVLPNHITYNTMIDGHIKGGDLE 248

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               + D M   G+KP+A  Y++L  G  R     +   LL  M      P+   ++ + 
Sbjct: 249 AGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILF 308

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G   +G     + +F K  ++GV+    T   L+ G  +  +   AEE+LQ +   G+ 
Sbjct: 309 DGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLV 368

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           P +  +  L      TG  + A     ++K++ 
Sbjct: 369 PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRH 401



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 1/203 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   ++N+  + GK  EA AI +++      P+   Y  ++ A       +    ++ 
Sbjct: 476 VVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVE 535

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++ NG+ P  + +N +I        + EA +    +    L P   +YNTLI      G
Sbjct: 536 KMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRG 595

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++++ L   M + G +K  +RTY+ L+        + E   +  KM  + + P    +
Sbjct: 596 NIDKALDLQQRMHKYG-IKSTVRTYHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIH 654

Query: 252 NTIATAYAQNGEADQAEEVIVEM 274
           N +  AY++ G   +AE++  EM
Sbjct: 655 NIMVEAYSKYGNEIKAEDLRKEM 677


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 217/442 (49%), Gaps = 14/442 (3%)

Query: 85  RGKPQEAQAIFNNLIEGGH-----KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           R  P  A A+FN  +   H      P+L TY  L+   T   R     +   QV + G+ 
Sbjct: 82  RDGPALAVALFNR-VSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLG 140

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            D+I  + ++    E+    EA+D    +M   G  P   +Y  ++K      K  ++ +
Sbjct: 141 IDTIMISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADE 200

Query: 199 LLDLMSREGNV-KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           LL +M+  G V  PN   YN ++  +  E ++ +A ++ ++M   G+ PD+ TYN +  A
Sbjct: 201 LLRMMAEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNA 260

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+AE ++ +M   GV P+  T   +I GY   G+ KEA+R ++ M   G+ P+
Sbjct: 261 LCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPD 320

Query: 318 LVIFNLLIKGFV---EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
           +V  N L+       +I D   V + +A+  +     D+ +Y  ++N ++T G +    E
Sbjct: 321 VVTLNSLMASLCKHGKIKDARDVFDSMAMKGQ---KTDIFSYKIMLNGYATKGCLVDLTE 377

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +F+ M   GI PD+H +++L K Y +    ++A  +   M E G  P+VV ++T+I+  C
Sbjct: 378 LFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALC 437

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G MD A+E F++M + GV+P++ T+  L+ G+       +A++++  M   G+ P   
Sbjct: 438 RIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIG 497

Query: 495 TFLLLAEARRATGLTKEAKRIL 516
            F  +       G   +A+ I 
Sbjct: 498 CFNFIINNLCKLGRVMDAQNIF 519



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 217/451 (48%), Gaps = 4/451 (0%)

Query: 75  MTKLMNSLIERGKPQEAQAIF-NNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++ L+  L E  +  EA  I  + +   G  P + +Y  +L +L   ++      ++  +
Sbjct: 146 ISNLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMM 205

Query: 134 EENGMD--PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            E G    P+++ +N VI+ F + G++ +A D F +M + G++P  STYN ++     A 
Sbjct: 206 AEGGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKAR 265

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +++  +L  M  +G V P+  TYN L+  + +     EA  V  KM + G+ PDVVT 
Sbjct: 266 AMDKAEAILRQMVDKG-VLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTL 324

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++  +  ++G+   A +V   M   G + +  +  I+++GY  +G + +       M  
Sbjct: 325 NSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLS 384

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P+  IFN+LIK + +    D    +   M+E  V PDV+TYST++ A    G MD 
Sbjct: 385 DGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDD 444

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E F+ M   G+ P    Y  L +G+    +  KA++L++ M+  G  P++  F  II+
Sbjct: 445 AVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIIN 504

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             C  G +  A  +FD     G+ PN+  + TLM GY    +   A  +  +M + G+ P
Sbjct: 505 NLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQP 564

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
               +  L       G   E   +  +I +K
Sbjct: 565 NVVVYGTLVNGYCKVGRIDEGLSLFREILHK 595



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 226/484 (46%), Gaps = 43/484 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++  LM SL + GK ++A+ +F+++   G K  + +Y  +L     +     +  + +
Sbjct: 321 VVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFN 380

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G+ PDS  FN +I A+++ G ++ A   F +M+E G+ P   TY+T+I      G
Sbjct: 381 LMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIG 440

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +++V+  + M  +G V P++ TY+ L++ +C   ++ +A +++ +M   GM+PD+  +
Sbjct: 441 KMDDAVEKFNQMIDQG-VAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCF 499

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N I     + G    A+ +       G+ PN      ++ GYC  GK++ ALR    M  
Sbjct: 500 NFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVS 559

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            G+ PN+V++  L+ G+ ++     +DE L+L +E     + P    Y+ I++    AG 
Sbjct: 560 AGIQPNVVVYGTLVNGYCKV---GRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGR 616

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE--------------------------- 401
               K  F +M ++GI  D + YSI+  G  +                            
Sbjct: 617 TVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNI 676

Query: 402 --------QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
                   +  E+A++L  ++  SG  P+VV ++ +++    +G ++ A ++F  M   G
Sbjct: 677 MIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAG 736

Query: 454 V-SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
              PN +    ++    E R+  RA   L  +         ST  LL +   + G  +E 
Sbjct: 737 CEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDLFSSKGTCREH 796

Query: 513 KRIL 516
            R L
Sbjct: 797 IRFL 800



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/446 (22%), Positives = 212/446 (47%), Gaps = 5/446 (1%)

Query: 80  NSLI----ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           NSLI      G+ +EA  +   +   G  P +VT  +L+A+L    +      +   +  
Sbjct: 290 NSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAM 349

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G   D   +  ++N ++  G + +  + F  M   G+ P +  +N LIK Y   G  + 
Sbjct: 350 KGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDR 409

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  + + M RE  V+P++ TY+ ++ A C    + +A    ++M   G+ P + TY+ + 
Sbjct: 410 ATIIFNEM-REQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLI 468

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             +  +G+  +A++++++M + G++P+      II+  CK G++ +A          G+H
Sbjct: 469 QGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLH 528

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN++++N L+ G+  +   +    V  +M    + P+V+ Y T++N +   G +D+   +
Sbjct: 529 PNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSL 588

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F ++   GIKP    Y+I+  G  +      A+     M ESG   +   ++ ++ G   
Sbjct: 589 FREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFK 648

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +   D AI +F ++    V  ++ T   ++ G  + R+   A+++   +   G+ P   T
Sbjct: 649 NSCSDEAILLFKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVT 708

Query: 496 FLLLAEARRATGLTKEAKRILSKIKN 521
           + ++       GL +EA  + S ++N
Sbjct: 709 YSIMMTNLIKEGLVEEADDMFSSMEN 734



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/312 (21%), Positives = 148/312 (47%), Gaps = 5/312 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           MNK     +     ++N+L + G+  +AQ IF+  I  G  P+++ Y TL+    +  + 
Sbjct: 488 MNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKM 547

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            +   +   +   G+ P+ + +  ++N + + G ++E +  F ++   G+ P+T+ YN +
Sbjct: 548 ENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNII 607

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           + G   AG+   +      M+  G +  +  TY++++          EA  +  ++ A  
Sbjct: 608 LHGLFQAGRTVPAKVKFHEMTESG-IAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMN 666

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           +K D+ T N +     Q    ++A+++   +  +G+ P+  T  I+++   KEG ++EA 
Sbjct: 667 VKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEAD 726

Query: 304 RFARTMKEYGV-HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
               +M+  G   PN  + N +++  +E  +       L+ + E   + D  T + +++ 
Sbjct: 727 DMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLLIDL 786

Query: 363 WSTAGFMDKCKE 374
           +S+ G    C+E
Sbjct: 787 FSSKG---TCRE 795



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/290 (22%), Positives = 134/290 (46%), Gaps = 11/290 (3%)

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI-MDRDGV 337
           + P   T GI++    +  + K  L F   + + G+  + ++ + L++G  E     + +
Sbjct: 104 LSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEAL 163

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG--IKPDAHAYSILA 395
           D +L  M      PDV +Y  ++ +  +     +  E+   M + G    P+A AY+ + 
Sbjct: 164 DILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVI 223

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G+ +E +  KA +L   M++ G  P++  +  +++  C   +MD+A  +  +M + GV 
Sbjct: 224 DGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVL 283

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P+  T+ +L++GYS   Q   A  + + M + G+ P   T   L  +    G  K+A+ +
Sbjct: 284 PDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDV 343

Query: 516 LSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSD 565
              +  K +  +        + S + + +  AT     +L ++ N++ SD
Sbjct: 344 FDSMAMKGQKTD--------IFSYKIMLNGYATKGCLVDLTELFNLMLSD 385


>gi|449438586|ref|XP_004137069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 201/366 (54%), Gaps = 1/366 (0%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +++Q+E  G+ P+   +  +I A   +G++++A   F +M + GL      Y  +I G+ 
Sbjct: 129 LLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFF 188

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G  ++  +L   M   G V PNL TYN L+  +C +  ++ A+ V  +++  G+  + 
Sbjct: 189 KKGYKKDGFELYQKMKLVG-VLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNA 247

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTYN +     + G+  +AE ++  M+   + P  RT  +++ G C  G++ +AL +   
Sbjct: 248 VTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEK 307

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           +K  G+ P LV +N+LI GF ++ +   V E++  M++  ++P  +TY+ +MN +  +  
Sbjct: 308 LKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDD 367

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           ++K  E+F  M + G+ PD H Y +L  G   +    +A +L  +M+E    PN VI+ T
Sbjct: 368 IEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNT 427

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I+G+C + +  +A++  ++M ++GV+PN+ ++ + +    +  +   A+ +L+ M   G
Sbjct: 428 MINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAG 487

Query: 489 VHPQKS 494
           + P +S
Sbjct: 488 LKPPES 493



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 213/464 (45%), Gaps = 18/464 (3%)

Query: 71  TVRSMTKLMNSLIERGKPQEA------------QAI--FNNLIEGGHKPSLVTYTTLLAA 116
           T+ S  + +NS    G+P++A            Q++  F  ++  GH PS  ++   L  
Sbjct: 23  TISSTQRNLNSESVCGRPRDAVINASFQSQLLEQSLDSFKLMVLKGHSPSSFSFNNALDL 82

Query: 117 LTIQKRFNSIHSIMSQVEENGMDPDSIF-FNAVINAFSESGNMEEAMDTFWKMKESGLTP 175
           L      +      +  E  G     ++ F   I AF E+GN+ +  +   +M+  G++P
Sbjct: 83  LAKSGNLDRTWGFFT--EYLGRTQFDVYSFGITIKAFCENGNVSKGFELLAQMETMGVSP 140

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
               Y  LI+     G  +++  +   M   G +  N   Y +++  +  +    + + +
Sbjct: 141 NVFIYTILIEACCRNGDIDQAKVMFSRMDDLG-LAANQYIYTIMINGFFKKGYKKDGFEL 199

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
             KM   G+ P++ TYN++ T Y ++G+   A +V  E+   GV  N  T  I+I G C+
Sbjct: 200 YQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCR 259

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           +G++ +A      MK   ++P    FN+L+ G       D     L  +K   + P ++T
Sbjct: 260 KGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVT 319

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+ +++ +S  G      E+  +M   GI P    Y+IL   +VR  + EKA E+   M 
Sbjct: 320 YNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMK 379

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G  P+   +  +I G C  G+M  A +++  M E  + PN   + T++ GY +    +
Sbjct: 380 RIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSY 439

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +A + L+ M   GV P  ++++   +     G + EAKR+L ++
Sbjct: 440 KALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEM 483



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 36/218 (16%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C T+ +   L++   + G       +   + + G  PS VTYT L+              
Sbjct: 314 CPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILM-------------- 359

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
                                N F  S ++E+A + F  MK  GL P   TY  LI G  
Sbjct: 360 ---------------------NTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLC 398

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
           I G   E+ KL   M  E +++PN   YN ++  +C E N  +A   + +M  +G+ P+V
Sbjct: 399 IKGNMVEASKLYKSMV-EMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNV 457

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
            +Y +      ++G++ +A+ ++ EM   G++P    C
Sbjct: 458 ASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPESLC 495


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 191/377 (50%), Gaps = 2/377 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI-HSIMSQVEEN 136
           L++ L + G  + A+A F+ ++E G KP + TY  L++        ++  HS+  +   N
Sbjct: 202 LIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTIN 261

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G   D   + A+++  +++  +EEA+    K+  +G TPT +TYN L+ G    G+ EE+
Sbjct: 262 GCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEA 321

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + LL  +   G   P++ TY  L+     EK   EA+ +  +MA  G+  D V Y  +  
Sbjct: 322 IDLLRKIVDNG-CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIR 380

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              Q G+  QA  V   M  +G  P+  T   +I G  K G+I  A+R  ++M+  G+ P
Sbjct: 381 ELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAP 440

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N V+++ LI G  +    D   E+LA MK+    PD ITY+ +++    +G ++  +  F
Sbjct: 441 NEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFF 500

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           D+M +AG KPD + Y+IL  G+ +    + A  +   M  S    NVV +  +ISG C  
Sbjct: 501 DEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSANVVTYGALISGLCKR 560

Query: 437 GSMDRAIEVFDKMCEHG 453
             + +A   F  M E G
Sbjct: 561 RQLTKASLYFQHMKERG 577



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 210/432 (48%), Gaps = 37/432 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L+  L++ GK  +A +++  +   G  P +VT +T++  L+   R  +   I   +E 
Sbjct: 95  TALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 154

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ P+ + ++A+I+   ++  M+ A++   +MK++  TP T TYN LI G   +G  E 
Sbjct: 155 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEA 214

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA-WNVMHKMAASGMKPDVVTYNTI 254
           +    D M  E   KP++ TYN+L+  +C   N   A  ++  +   +G   D+ TY  I
Sbjct: 215 ARAFFDEM-LEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAI 273

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
               A+N + ++A  ++ ++  NG  P   T   +++G CK G+++EA+   R + + G 
Sbjct: 274 VDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC 333

Query: 315 HPNLVIFNLLIKG-------------FVEIMDRD-GVDEVL--ALMKEFR---------- 348
            P++V +  LI G             F E+  R   +D V   AL++E            
Sbjct: 334 TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASS 393

Query: 349 ---------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
                      PDV+T ST+++  S AG +     IF  M   G+ P+   YS L  G  
Sbjct: 394 VYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLC 453

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           + ++ + A E+L  M ++   P+ + +  +I G C  G ++ A   FD+M E G  P++ 
Sbjct: 454 KARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVY 513

Query: 460 TFETLMWGYSEA 471
           T+  L+ G+ +A
Sbjct: 514 TYNILISGFCKA 525



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 220/482 (45%), Gaps = 43/482 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L+N L + G+ +EA  +   +++ G  P +VTYT+L+  L  +KR    + + 
Sbjct: 20  TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 79

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+  D++ + A+I    ++G + +A   +  M   G  P   T +T+I G   A
Sbjct: 80  KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 139

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+   +V++   M   G + PN   Y+ L+   C  + +  A  ++ +M  +   PD +T
Sbjct: 140 GRIGAAVRIFKSMEARG-LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 198

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG------------- 297
           YN +     ++G+ + A     EM   G +P+  T  I+ISG+CK G             
Sbjct: 199 YNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQET 258

Query: 298 -----------------------KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
                                  KI+EA+     +   G  P +  +N L+ G  + M R
Sbjct: 259 TINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCK-MGR 317

Query: 335 DGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
             ++E + L+++   N   PDV+TY+++++         +  ++F +M   G+  D   Y
Sbjct: 318 --LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCY 375

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + L +  ++  +  +A  +  TM   G  P+VV  +T+I G    G +  A+ +F  M  
Sbjct: 376 TALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 435

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            G++PN   +  L+ G  +AR+   A E+L  MK     P   T+ +L +    +G  + 
Sbjct: 436 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEA 495

Query: 512 AK 513
           A+
Sbjct: 496 AR 497



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/394 (26%), Positives = 187/394 (47%), Gaps = 37/394 (9%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           +EEA+    K+  +G TPT +TYN L+ G    G+ EE++ LL  +   G   P++ TY 
Sbjct: 2   IEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG-CTPDVVTYT 60

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            L+     EK   EA+ +  +MA  G+  D V Y  +     Q G+  QA  V   M  +
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G  P+  T   +I G  K G+I  A+R  ++M+  G+ PN V+++ LI G  +    D  
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E+LA MK+    PD ITY+ +++    +G ++  +  FD+M +AG KPD + Y+IL  G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 398 YV------------------------------------REQEPEKAEELLMTMIESGFHP 421
           +                                     + ++ E+A  L+  +  +G  P
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            +  +  +++G C  G ++ AI++  K+ ++G +P++ T+ +L+ G  + ++ + A ++ 
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           + M   G+      +  L      TG   +A  +
Sbjct: 361 KEMALRGLALDTVCYTALIRELLQTGKIPQASSV 394



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 135/589 (22%), Positives = 247/589 (41%), Gaps = 67/589 (11%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K +EA A+   +   G  P++ TY  LL  L    R      ++ ++ +NG  PD + + 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           ++I+   +     EA   F +M   GL   T  Y  LI+     GK  ++  +   M+  
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G V P++ T + ++        I  A  +   M A G+ P+ V Y+ +     +  + D 
Sbjct: 121 GCV-PDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDC 179

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A E++ +M+     P+  T  ++I G CK G ++ A  F   M E G  P++  +N+LI 
Sbjct: 180 ALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILIS 239

Query: 327 GFVEIMDRDG---------------------------------VDEVLALMKEFRVN--- 350
           GF +  + D                                  ++E +ALM++   N   
Sbjct: 240 GFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCT 299

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P + TY+ ++N     G +++  ++   +   G  PD   Y+ L  G  +E+   +A +L
Sbjct: 300 PTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKL 359

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
              M   G   + V +T +I      G + +A  V+  M  HG  P++ T  T++ G S+
Sbjct: 360 FKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSK 419

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK-----RILSKIKNKERT 525
           A +   A  I + M+A G+ P +  +  L       GL K  K      +L+++K    T
Sbjct: 420 AGRIGAAVRIFKSMEARGLAPNEVVYSALIH-----GLCKARKMDCALEMLAQMKKAFCT 474

Query: 526 NEMEAEEDIPVESLERLYHKEATTASYPNLLQI---PNVVSSDQKGSAAALKKGRMLLRD 582
            +     +I ++ L +    EA  A +  +L+    P+V + +   S           + 
Sbjct: 475 PD-TITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG--------FCKA 525

Query: 583 ADSSLECSWFATTSMYLSHSCKS-----GARLPIICQKQPLGQVGMYSQ 626
            ++   C  F   S   S  C +     GA +  +C+++ L +  +Y Q
Sbjct: 526 GNTDAACGVFDDMS---SSRCSANVVTYGALISGLCKRRQLTKASLYFQ 571


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  198 bits (504), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 210/428 (49%), Gaps = 1/428 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +RS   L+N+LIE  K  EA++ F      G  P+L TY  L+     +K+F+    +++
Sbjct: 89  IRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLN 148

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  PD   +  +IN+ +++G M +A+  F +M E G+TP  + YN LI G+   G
Sbjct: 149 WMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKG 208

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               + ++ + + +  +V PN+ +YNV++   C      E++ + H+M  +    D+ TY
Sbjct: 209 DILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 268

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +T+      +G  D A  V  EM  NGV P+      +++GY + G+I+E L   + M++
Sbjct: 269 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEK 328

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G    +V +N+LI+G  E    D    +  L+ E     D +TY  +++     G+++K
Sbjct: 329 EGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNK 387

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              I ++        D  AYS +  G  RE   ++   +L  M + G  PN  +   +I+
Sbjct: 388 ALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVIN 447

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+     ++ A+  F  M   G  P + T+ TL+ G S+A +   A  +++ M   G  P
Sbjct: 448 GFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKP 507

Query: 492 QKSTFLLL 499
              T+ LL
Sbjct: 508 NMITYSLL 515



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 204/415 (49%), Gaps = 3/415 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           L++   ++G    A  I+  L++G    P++ +Y  ++  L    +F+    I  ++++N
Sbjct: 200 LIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKN 259

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
               D   ++ +I+    SGN++ A   + +M E+G++P    YNT++ GY  AG+ EE 
Sbjct: 260 ERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEEC 319

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++L  +M +EG     + +YN+L+R       + EA ++   +       D +TY  +  
Sbjct: 320 LELWKVMEKEGC--RTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVH 377

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              +NG  ++A  ++ E E+     +      +I+G C+EG++ E       M ++G  P
Sbjct: 378 GLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKP 437

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N  + N +I GFV     +        M      P V+TY+T++N  S A    +   + 
Sbjct: 438 NPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALV 497

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M + G KP+   YS+L  G  + ++ + A  L    +E GF P+V +   II G CS 
Sbjct: 498 KEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSS 557

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G ++ A++++ +M +    PNL T  TLM G+ + R   RA +I   +  +G+ P
Sbjct: 558 GKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQP 612



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 207/437 (47%), Gaps = 8/437 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   ++N L + GK  E+  I++ + +      L TY+TL+  L      +    +  
Sbjct: 230 IPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYK 289

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ ENG+ PD + +N ++N +  +G +EE ++  WK+ E     T  +YN LI+G     
Sbjct: 290 EMAENGVSPDVVVYNTMLNGYLRAGRIEECLE-LWKVMEKEGCRTVVSYNILIRGLFENA 348

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E++ + +L+  E +   +  TY VLV   C    + +A +++ +        D   Y
Sbjct: 349 KVDEAISIWELLP-EKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAY 407

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +++     + G  D+   V+ +M  +G +PN   C  +I+G+ +  K+++ALRF   M  
Sbjct: 408 SSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVS 467

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGF 368
            G  P +V +N LI G  +    +   E  AL+KE       P++ITYS +MN       
Sbjct: 468 KGCFPTVVTYNTLINGLSK---AERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKK 524

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D    ++    + G KPD   ++I+  G     + E A +L   M +    PN+V   T
Sbjct: 525 LDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNT 584

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++ G+      +RA +++D + ++G+ P++ ++   + G     +   A   L      G
Sbjct: 585 LMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAVDRG 644

Query: 489 VHPQKSTFLLLAEARRA 505
           V P   T+ +L +   A
Sbjct: 645 VLPTAITWNILVQGYLA 661



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 162/336 (48%), Gaps = 1/336 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M KE CRTV S   L+  L E  K  EA +I+  L E       +TY  L+  L      
Sbjct: 326 MEKEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYL 385

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           N   SI+ + E    D D+  ++++IN     G ++E      +M + G  P     N +
Sbjct: 386 NKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAV 445

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G+  A K E++++    M  +G   P + TYN L+      +  +EA+ ++ +M   G
Sbjct: 446 INGFVRASKLEDALRFFGNMVSKGCF-PTVVTYNTLINGLSKAERFSEAYALVKEMLQKG 504

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
            KP+++TY+ +     Q  + D A  +  +    G +P+ +   III G C  GK+++AL
Sbjct: 505 WKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDAL 564

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
           +    MK+    PNLV  N L++GF ++ D +   ++   + ++ + PD+I+Y+  +   
Sbjct: 565 QLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGL 624

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
            +   +       +D    G+ P A  ++IL +GY+
Sbjct: 625 CSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYL 660



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 197/441 (44%), Gaps = 46/441 (10%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKR--FNSIHSIMSQVEENGMDPDSIFFNAVINA 151
           +F+++++    P LV +     ++  Q    F  +H I       G  P    +N+++NA
Sbjct: 45  VFHHILKRLFDPKLVAHAYAKNSMPDQALDIFQRMHEIF------GCQPGIRSYNSLLNA 98

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP 211
             ES   +EA   F   +  GL+P   TYN LIK      + +++ +LL+ M  +G   P
Sbjct: 99  LIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQG-FSP 157

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           ++ +Y  L+ +      +++A  +  +M   G+ PDV  YN +   + + G+   A E+ 
Sbjct: 158 DVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEIW 217

Query: 272 VEM-EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             + +   V PN  +  ++I+G CK GK  E+      MK+     +L  ++ LI G   
Sbjct: 218 ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCG 277

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
             + DG   V   M E  V+PDV+ Y+T++N +  AG +++C E++  M K G +    +
Sbjct: 278 SGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVS 336

Query: 391 YSILAKGY-----------VREQEPEK---AEELLMTMIESGFHPN-------------- 422
           Y+IL +G            + E  PEK   A+ +   ++  G   N              
Sbjct: 337 YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAE 396

Query: 423 -------VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
                     ++++I+G C +G +D    V D+M +HG  PN      ++ G+  A +  
Sbjct: 397 NGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLE 456

Query: 476 RAEEILQIMKAFGVHPQKSTF 496
            A      M + G  P   T+
Sbjct: 457 DALRFFGNMVSKGCFPTVVTY 477



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/394 (23%), Positives = 173/394 (43%), Gaps = 13/394 (3%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLIK----------GYG 188
           P S+    VI       N   A+  F  + +  G + T   ++ ++K           Y 
Sbjct: 5   PKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAHAYA 64

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
               P++++ +   M      +P +R+YN L+ A        EA +        G+ P++
Sbjct: 65  KNSMPDQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNL 124

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TYN +     +  + D+A+E++  M   G  P+  + G +I+   K G + +AL+    
Sbjct: 125 QTYNILIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDE 184

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA-LMKEFRVNPDVITYSTIMNAWSTAG 367
           M E GV P++  +N+LI GF +  D     E+   L+K   V P++ +Y+ ++N     G
Sbjct: 185 MPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCG 244

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
             D+  EI+  M K     D + YS L  G       + A  +   M E+G  P+VV++ 
Sbjct: 245 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 304

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T+++G+   G ++  +E++  M + G    + ++  L+ G  E  +   A  I +++   
Sbjct: 305 TMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEK 363

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
                  T+ +L       G   +A  IL + +N
Sbjct: 364 DCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 397



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 101/196 (51%), Gaps = 2/196 (1%)

Query: 335 DGVDEVLALMKE-FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
           D   ++   M E F   P + +Y++++NA   +   D+ +  F      G+ P+   Y+I
Sbjct: 70  DQALDIFQRMHEIFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNI 129

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L K   R+++ +KA+ELL  M   GF P+V  + T+I+    +G M  A+++FD+M E G
Sbjct: 130 LIKISCRKKQFDKAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERG 189

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQ-IMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           V+P++  +  L+ G+ +      A EI + ++K   V+P   ++ ++       G   E+
Sbjct: 190 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDES 249

Query: 513 KRILSKIKNKERTNEM 528
             I  ++K  ER  ++
Sbjct: 250 FEIWHRMKKNERGQDL 265


>gi|449530582|ref|XP_004172273.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Cucumis sativus]
          Length = 505

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 201/366 (54%), Gaps = 1/366 (0%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +++Q+E  G+ P+   +  +I A   +G++++A   F +M + GL      Y  +I G+ 
Sbjct: 129 LLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMDDLGLAANQYIYTIMINGFF 188

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G  ++  +L   M   G V PNL TYN L+  +C +  ++ A+ V  +++  G+  + 
Sbjct: 189 KKGYKKDGFELYQKMKLVG-VLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNA 247

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTYN +     + G+  +AE ++  M+   + P  RT  +++ G C  G++ +AL +   
Sbjct: 248 VTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEK 307

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           +K  G+ P LV +N+LI GF ++ +   V E++  M++  ++P  +TY+ +MN +  +  
Sbjct: 308 LKLIGLCPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDD 367

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           ++K  E+F  M + G+ PD H Y +L  G   +    +A +L  +M+E    PN VI+ T
Sbjct: 368 IEKAYEMFHLMKRIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNT 427

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I+G+C + +  +A++  ++M ++GV+PN+ ++ + +    +  +   A+ +L+ M   G
Sbjct: 428 MINGYCKECNSYKALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEMTEAG 487

Query: 489 VHPQKS 494
           + P +S
Sbjct: 488 LKPPES 493



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 213/464 (45%), Gaps = 18/464 (3%)

Query: 71  TVRSMTKLMNSLIERGKPQEA------------QAI--FNNLIEGGHKPSLVTYTTLLAA 116
           T+ S  + +NS    G+P++A            Q++  F  ++  GH PS  ++   L  
Sbjct: 23  TISSTQRNLNSESVCGRPRDAVINASLQSQLLEQSLDGFKLMVLKGHSPSSFSFNNALDL 82

Query: 117 LTIQKRFNSIHSIMSQVEENGMDPDSIF-FNAVINAFSESGNMEEAMDTFWKMKESGLTP 175
           L      +      +  E  G     ++ F   I AF E+GN+ +  +   +M+  G++P
Sbjct: 83  LAKSGNLDRTWGFFT--EYLGRTQFDVYSFWITIKAFCENGNVSKGFELLAQMETMGVSP 140

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
               Y  LI+     G  +++  +   M   G +  N   Y +++  +  +    + + +
Sbjct: 141 NVFIYTILIEACCRNGDIDQAKVMFSRMDDLG-LAANQYIYTIMINGFFKKGYKKDGFEL 199

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
             KM   G+ P++ TYN++ T Y ++G+   A +V  E+   GV  N  T  I+I G C+
Sbjct: 200 YQKMKLVGVLPNLYTYNSLITEYCRDGKLSLAFKVFDEISKRGVACNAVTYNILIGGLCR 259

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           +G++ +A      MK   ++P    FN+L+ G       D     L  +K   + P ++T
Sbjct: 260 KGQVSKAEGLLERMKRAHINPTTRTFNMLMDGLCNTGQLDKALSYLEKLKLIGLCPTLVT 319

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+ +++ +S  G      E+  +M   GI P    Y+IL   +VR  + EKA E+   M 
Sbjct: 320 YNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILMNTFVRSDDIEKAYEMFHLMK 379

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G  P+   +  +I G C  G+M  A +++  M E  + PN   + T++ GY +    +
Sbjct: 380 RIGLVPDQHTYGVLIHGLCIKGNMVEASKLYKSMVEMHLQPNDVIYNTMINGYCKECNSY 439

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +A + L+ M   GV P  ++++   +     G + EAKR+L ++
Sbjct: 440 KALKFLEEMVKNGVTPNVASYISTIQILCKDGKSIEAKRLLKEM 483



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 59/200 (29%), Positives = 103/200 (51%)

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           F + IK F E  +     E+LA M+   V+P+V  Y+ ++ A    G +D+ K +F  M 
Sbjct: 110 FWITIKAFCENGNVSKGFELLAQMETMGVSPNVFIYTILIEACCRNGDIDQAKVMFSRMD 169

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             G+  + + Y+I+  G+ ++   +   EL   M   G  PN+  + ++I+ +C DG + 
Sbjct: 170 DLGLAANQYIYTIMINGFFKKGYKKDGFELYQKMKLVGVLPNLYTYNSLITEYCRDGKLS 229

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            A +VFD++ + GV+ N  T+  L+ G     Q  +AE +L+ MK   ++P   TF +L 
Sbjct: 230 LAFKVFDEISKRGVACNAVTYNILIGGLCRKGQVSKAEGLLERMKRAHINPTTRTFNMLM 289

Query: 501 EARRATGLTKEAKRILSKIK 520
           +    TG   +A   L K+K
Sbjct: 290 DGLCNTGQLDKALSYLEKLK 309



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/218 (25%), Positives = 93/218 (42%), Gaps = 36/218 (16%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C T+ +   L++   + G       +   + + G  PS VTYT L+              
Sbjct: 314 CPTLVTYNILISGFSKVGNSSVVSELVREMEDRGISPSKVTYTILM-------------- 359

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
                                N F  S ++E+A + F  MK  GL P   TY  LI G  
Sbjct: 360 ---------------------NTFVRSDDIEKAYEMFHLMKRIGLVPDQHTYGVLIHGLC 398

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
           I G   E+ KL   M  E +++PN   YN ++  +C E N  +A   + +M  +G+ P+V
Sbjct: 399 IKGNMVEASKLYKSMV-EMHLQPNDVIYNTMINGYCKECNSYKALKFLEEMVKNGVTPNV 457

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
            +Y +      ++G++ +A+ ++ EM   G++P    C
Sbjct: 458 ASYISTIQILCKDGKSIEAKRLLKEMTEAGLKPPESLC 495


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 233/486 (47%), Gaps = 13/486 (2%)

Query: 66  KESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           +E+CR    + + L++ L E G+ +EA  +   ++E G +PS  TYT L+ A       +
Sbjct: 258 EENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTD 317

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
               ++ ++      P+   +  +I+     G +EEA   F KM + GL P   T+N LI
Sbjct: 318 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALI 377

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            GY   G    + +LL +M + GN KPN+RTYN L+   C      +A+ ++ ++  +G+
Sbjct: 378 NGYCKEGWVVSAFQLLSVMEK-GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 436

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            PD VTYN +   + + G+ + A  +   M   G++P+G T   +I G CK G++++A  
Sbjct: 437 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 496

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
              +M + G+  + V F  LI G  +I     V  +   M E R      T++  ++A  
Sbjct: 497 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 556

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
               +++   +   M K G+ P    ++IL +G+ R  E   + ++L  M ++G  PNV 
Sbjct: 557 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 616

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +T II+G C++G ++ A  +   M   GVSPN  T+  L+  + +A +  RA +I+  M
Sbjct: 617 TYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 676

Query: 485 KAFGVHPQK-------STFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE----D 533
              G  P         S F+L   A  A  L+         + ++E  N   + E     
Sbjct: 677 VKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCG 736

Query: 534 IPVESL 539
           +P E L
Sbjct: 737 VPTEDL 742



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/515 (21%), Positives = 230/515 (44%), Gaps = 39/515 (7%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C  + +   L+N   + G    A  + + + +G  KP++ TY  L+  L    +      
Sbjct: 367 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 426

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++ +V +NG+ PD + +N +++ F + G +  A + F  M  +GL P   T+  LI G  
Sbjct: 427 LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLC 486

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G+ E++  +L  M ++G +  +  T+  L+   C      +   +   M  +      
Sbjct: 487 KLGRLEQANGILGSMVKKG-ISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 545

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            T+N    A  ++ + ++A  ++ +M   G+ P+  T  I+I G+C+ G+   +L+    
Sbjct: 546 HTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 605

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           MK+ G  PN+  + ++I G       +  + +L  M  F V+P+  TY+ ++ A   AG 
Sbjct: 606 MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR 665

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL------------------ 410
           +D+  +I   M K G +P++H YS L  G+V       A  L                  
Sbjct: 666 LDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDN 725

Query: 411 --LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
             L   I+    P   ++  ++ G C +G +  A ++   M +HG+ P+ K   +++  Y
Sbjct: 726 NCLSNEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD-KAISSIIEHY 784

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNE- 527
            +  +     E ++++      P  +++  +    R  G  +EA++++S +       E 
Sbjct: 785 CKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEEE 844

Query: 528 ----------MEAEEDIP------VESLERLYHKE 546
                     M+ EED P      ++++E++++KE
Sbjct: 845 VEVTPSIEFLMKEEEDDPDKCLKLIKAIEQVHYKE 879



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 200/461 (43%), Gaps = 35/461 (7%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
            + + E G + S   Y+TLL  L           +  ++   G     I +  V+NA  +
Sbjct: 147 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 206

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
           +G ++ A     K+   G    T    +L+          E+ ++ + MS+E N +PN  
Sbjct: 207 NGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEENCRPNSV 266

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TY++L+   C    + EA+ +  +M   G +P   TY  +  A    G  D+A +++ EM
Sbjct: 267 TYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKMLDEM 326

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF------ 328
                 PN  T  I+I   C+EGKI+EA    R M ++G+ P ++ FN LI G+      
Sbjct: 327 ATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALINGYCKEGWV 386

Query: 329 ------VEIMDR--------------DGVDEVLALMKEF----RVN-----PDVITYSTI 359
                 + +M++              +G+  V    K F    RV      PD +TY+ +
Sbjct: 387 VSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLPDRVTYNIL 446

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++ +   G ++    IF+ M  AG++PD   ++ L  G  +    E+A  +L +M++ G 
Sbjct: 447 VDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGILGSMVKKGI 506

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
             + V FT +I G C  G       +F+ M E+       TF   +    +  +   A  
Sbjct: 507 SLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKDYKLNEANA 566

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +L  M  +G+ P   T  +L E     G T  + ++L ++K
Sbjct: 567 MLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMK 607


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  198 bits (503), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 190/380 (50%), Gaps = 1/380 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +MN +    +P  A      +++ G +P LVT+T+LL       R     ++  Q+   G
Sbjct: 123 VMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMG 182

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + +  +I+   ++ ++  A++ F +M ++G+ P   TYN+L+ G    G+  ++ 
Sbjct: 183 FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAA 242

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M + G ++PN+ T+  L+ A+     I EA  +   M    + PDV TY  +   
Sbjct: 243 WLLRDMMKRG-IQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALING 301

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G  D+A ++   ME NG  PN  T   +I G+CK  ++++  +    M + G+  N
Sbjct: 302 LCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVAN 361

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + + +LI+G+  +   D   EV   M   R  PD+ TY+ +++     G+++K   IF 
Sbjct: 362 TITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFK 421

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M K  +  +   Y+I+ +G  +  + E A +L  ++   G  PNV+ +TT+ISG+C  G
Sbjct: 422 YMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRG 481

Query: 438 SMDRAIEVFDKMCEHGVSPN 457
            +  A  +F KM E G  PN
Sbjct: 482 FIHEADALFKKMKEDGFLPN 501



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 222/461 (48%), Gaps = 4/461 (0%)

Query: 60  CSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           C FC      R   +  K++ + +   +  EA  +F  ++     PS+V +T LL+ +  
Sbjct: 38  CGFCF---WIRAFSNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIVDFTRLLSVIAK 94

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
            KRF+ + S+  Q++  G+ P     N V+N    S     A     KM + G  P   T
Sbjct: 95  MKRFDVVISLFEQMQILGISPVLYTCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVT 154

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           + +L+ G+    + E+++ L D +   G  +PN+ TY  L+   C  +++  A  + ++M
Sbjct: 155 FTSLLHGFCHWNRIEDALALFDQIVGMG-FRPNVVTYTTLIHCLCKNRHLNHAVEIFNQM 213

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
             +G++P+VVTYN++ +   + G    A  ++ +M   G+QPN  T   +I  + K GKI
Sbjct: 214 GDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKI 273

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            EA    + M +  V+P++  +  LI G       D   ++  LM+     P+ +TY+T+
Sbjct: 274 MEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTL 333

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++ +  +  ++   +IF +M + G+  +   Y++L +GY     P+ A+E+   M     
Sbjct: 334 IHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRA 393

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            P++  +  ++ G C +G +++A+ +F  M +  +  N+ T+  ++ G  +  +   A +
Sbjct: 394 PPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFD 453

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +   + + G+ P   T+  +       G   EA  +  K+K
Sbjct: 454 LFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMK 494



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/418 (23%), Positives = 187/418 (44%), Gaps = 13/418 (3%)

Query: 118 TIQKRFNSIHSIMSQVEENGMDPDSIF--FNAVINAFS----------ESGNMEEAMDTF 165
           +I K+   +H    Q+  +G  P      F   I AFS           +    EA+D F
Sbjct: 11  SIVKKGFHLHRHRLQISNHGASPTLSLCGFCFWIRAFSNYRKILRNGLHNLQFNEALDLF 70

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
            +M  S   P+   +  L+       + +  + L + M   G + P L T N+++   C 
Sbjct: 71  TRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILG-ISPVLYTCNIVMNCVCR 129

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
                 A   + KM   G +PD+VT+ ++   +      + A  +  ++   G +PN  T
Sbjct: 130 SSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVT 189

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
              +I   CK   +  A+     M + G+ PN+V +N L+ G  EI        +L  M 
Sbjct: 190 YTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMM 249

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           +  + P+VIT++ +++A+   G + + KE++  M +  + PD   Y+ L  G       +
Sbjct: 250 KRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLD 309

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +A ++   M  +G++PN V +TT+I G+C    ++   ++F +M + G+  N  T+  L+
Sbjct: 310 EARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLI 369

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            GY    +P  A+E+   M +    P   T+ +L +     G  ++A  I   ++ +E
Sbjct: 370 QGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKRE 427


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 216/464 (46%), Gaps = 6/464 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M K+    V + T L+++L + GK  EAQ +   +I  G  P  VT++TL+  L      
Sbjct: 70  MAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCKFGSE 129

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN-MEEAMDTFWKMKESGLTPTTSTYNT 182
                ++  V + GM      F  +I       N +E A      +   G TPT   +N 
Sbjct: 130 EQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNL 189

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G+  A   + + KLL++M  +G V PN+ T+ +L+   C    + EA  ++ KM   
Sbjct: 190 VINGFCKAKDLDSAYKLLEVMIEKGCV-PNVFTFTILITGLCKANRVGEAQQLLEKMVTG 248

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P+VVTY+T+     + G+ D A E+   ME     PN  T  I+I G CK  +I+EA
Sbjct: 249 GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 308

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN-PDVITYSTIMN 361
            +    M+E G  P+++ +N LI G  +    D   ++   + E  V+  + +TYST+ +
Sbjct: 309 RQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFH 368

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            ++  G M     IF  +   G  PD   Y+ L   Y +     +  EL+  M   GF P
Sbjct: 369 GYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 428

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            V   + ++ G       +RAI++FD M   G + +   +  ++ G + A +  +A  +L
Sbjct: 429 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVL 488

Query: 482 QIM---KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           + +   +    +P  S    L E+    G T +AK++L K+  +
Sbjct: 489 EQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSER 532



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 103/431 (23%), Positives = 201/431 (46%), Gaps = 3/431 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+  L +  +  EAQ +   ++ GG  P++VTY+T++  L  Q + +  + +  
Sbjct: 219 VFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQ 278

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +E     P+ +  N +I+   ++  +EEA   + +M+E+G  P   TYN+LI G   + 
Sbjct: 279 LMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSF 338

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+ +L   +   G    N  TY+ L   +     + +A  +   +   G  PD+ TY
Sbjct: 339 QVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATY 398

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++   Y +   A +  E++ EM   G  P   T   ++ G  +    + A++   +M  
Sbjct: 399 TSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAA 458

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM---KEFRVNPDVITYSTIMNAWSTAGF 368
            G   + +I+NL+++G       +    VL  +   ++ + NP       ++ +    G 
Sbjct: 459 RGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGR 518

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            D  K++   M + G      +Y+ L  G  R Q  ++A ++   M+ +G  P +     
Sbjct: 519 TDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNV 578

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +IS  CS   +D A E+  +M + G  P+++T  TL+ GY ++ +   A ++L+ M   G
Sbjct: 579 VISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAG 638

Query: 489 VHPQKSTFLLL 499
           + P  +T  LL
Sbjct: 639 LEPNDTTHDLL 649



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/500 (23%), Positives = 233/500 (46%), Gaps = 21/500 (4%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T LM  L + G+  EA   F  + +    P ++TYT L+ AL    +F+    ++ ++  
Sbjct: 48  TTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIA 106

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY-GIAGKPE 194
            G  PD++ F+ +I+   + G+ E+A      + + G+  + + + T+I+         E
Sbjct: 107 RGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVE 166

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            + K+L ++  +G   P +  +N+++  +C  K++  A+ ++  M   G  P+V T+  +
Sbjct: 167 LASKVLGVVIAKG-FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTIL 225

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
            T   +     +A++++ +M   G  PN  T   +I+G CK+G++ +A    + M+    
Sbjct: 226 ITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNC 285

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            PN+V  N+LI G  +    +   ++   M+E    PD+ITY+++++    +  +D+  +
Sbjct: 286 PPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQ 345

Query: 375 IFDDMGKAGIKP-DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           +F  + ++G+   +A  YS L  GY        A  +   +++ GF P++  +T++I  +
Sbjct: 346 LFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEY 405

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C        +E+ ++M   G  P + T   ++ G  E     RA ++   M A G     
Sbjct: 406 CKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDA 465

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK--ERTNEMEAEEDIPVESL---------ERL 542
             + L+ E         +A  +L ++ +K   + N   +  D  VESL         ++L
Sbjct: 466 LIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRTDDAKQL 525

Query: 543 YHK------EATTASYPNLL 556
            HK       A  +SY  LL
Sbjct: 526 LHKMSERGFAAAVSSYNGLL 545



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 181/394 (45%), Gaps = 39/394 (9%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P+   +  +I  FS +G+++ A+    +MK +G       + TL+KG   AG+  E+++ 
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
              M+++    P++ TY  LV A C      EA  ++ +M A G  PD VT++T+     
Sbjct: 67  FRAMAKD--CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLC 124

Query: 260 QNGEADQAEEVIVEM---------------------EHNGVQPNGRTCGIIIS------- 291
           + G  +QA  V+ ++                     ++N V+   +  G++I+       
Sbjct: 125 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 184

Query: 292 --------GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
                   G+CK   +  A +    M E G  PN+  F +LI G  +        ++L  
Sbjct: 185 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 244

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M     +P+V+TYST++N     G +D   E+F  M +    P+   ++IL  G  + + 
Sbjct: 245 MVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 304

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS-PNLKTFE 462
            E+A +L   M E+G  P+++ + ++I G C    +D A ++F  + E GVS  N  T+ 
Sbjct: 305 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 364

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           TL  GY+   +   A  I  ++   G  P  +T+
Sbjct: 365 TLFHGYAALGRMADACRIFSMLVDKGFSPDLATY 398



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 198/398 (49%), Gaps = 6/398 (1%)

Query: 102 GHKPSLVTYTTLLAALTIQKRF-NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
           G + + V +TTL+  L    R   ++    +  ++    PD + + A+++A  ++G  +E
Sbjct: 39  GFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCA--PDVMTYTALVHALCKAGKFDE 96

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A     +M   G  P T T++TLI G    G  E++ ++L+ + + G    +   +  ++
Sbjct: 97  AQGMLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSD-AAFETII 155

Query: 221 RAWCNEKNITE-AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +  CN+ N  E A  V+  + A G  P V+ +N +   + +  + D A +++  M   G 
Sbjct: 156 QRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGC 215

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            PN  T  I+I+G CK  ++ EA +    M   G  PN+V ++ +I G  +    D   E
Sbjct: 216 VPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYE 275

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +  LM+     P+V+T++ +++    A  +++ ++++  M + G  PD   Y+ L  G  
Sbjct: 276 LFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLC 335

Query: 400 REQEPEKAEELLMTMIESGFH-PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           +  + ++A +L  T+ ESG    N V ++T+  G+ + G M  A  +F  + + G SP+L
Sbjct: 336 KSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDL 395

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            T+ +L+  Y +  +     E+++ M + G  P+ +T 
Sbjct: 396 ATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 433



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 159/365 (43%), Gaps = 53/365 (14%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN  TY +L+R + +  ++  A  ++ +M ++G + + V + T+       G   +A E 
Sbjct: 7   PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEALEH 66

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
              M  +   P+  T   ++   CK GK  EA    R M   G  P+ V F+ LI G  +
Sbjct: 67  FRAMAKD-CAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGLCK 125

Query: 331 IMDRDGVDEVLALMKEFRVNPDVI---------TYSTIM----NAWSTAGFMDKCKEIFD 377
                G +E     + FRV  DVI          + TI+    N +++     K   +  
Sbjct: 126 F----GSEE-----QAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASK---VLG 173

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +   G  P    ++++  G+ + ++ + A +LL  MIE G  PNV  FT +I+G C   
Sbjct: 174 VVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKAN 233

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +  A ++ +KM   G SPN+ T+ T++ G  +  Q   A E+ Q+M+     P   T  
Sbjct: 234 RVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHN 293

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQ 557
           +L +     GL K AKRI                     E   +LYH+   T   P+++ 
Sbjct: 294 ILID-----GLCK-AKRI---------------------EEARQLYHRMRETGCAPDIIT 326

Query: 558 IPNVV 562
             +++
Sbjct: 327 YNSLI 331


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 212/433 (48%), Gaps = 12/433 (2%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  EA ++FN+LI+    P + ++ TLL A+   KR+  + S+  ++   G+ PD I  N
Sbjct: 72  KRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLN 131

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN +     ++  +    +M   G +P T T+ +L+KG  +  +  E+  LL  M R 
Sbjct: 132 ILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRM 191

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG------MKPDVVTYNTIATAYAQ 260
           G  +PN+ TY  L+   C   N   A  +  +M          +KP++V Y TI  +  +
Sbjct: 192 G-YRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCK 250

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
           +G  D+ +E+ +EM+  G+ P+      II G C  G+ + A      M + GVHPN+V 
Sbjct: 251 DGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVT 310

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           FN+LI    +    +  + +L LM +   +PD  TY+T+++ +   G +D  +++F  M 
Sbjct: 311 FNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSME 370

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             GI+ DA +Y++L  GY +     +A++L   M+     P V+ + T+++G   +G + 
Sbjct: 371 SKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVR 430

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            A  +F +M  H ++P   T+  L+ G  +      A E+   ++     P    F  L 
Sbjct: 431 DAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLI 490

Query: 501 EARRATGLTKEAK 513
           +     GL K  K
Sbjct: 491 D-----GLCKARK 498



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 174/348 (50%), Gaps = 3/348 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + +++ +   G+ + A+ +FN +++ G  P++VT+  L+ AL    +    + ++ 
Sbjct: 273 VVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLK 332

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G  PD+  +N +I+ F   G +++A D F  M+  G+     +YN LI GY  +G
Sbjct: 333 LMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSG 392

Query: 192 KPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           +  E+ KL  ++M +E  + P + TYN L+     E  + +AWN+  +M    + P+  T
Sbjct: 393 RMVEAKKLYREMMCKE--IMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCT 450

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +     +N    +A E+   +E++  QP+ +    +I G CK  KI+ A      + 
Sbjct: 451 YNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLS 510

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ PN++ + ++I G  +    +   ++   M+E    P+++T++T+M  +     M 
Sbjct: 511 HEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQNDEMQ 570

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           K  E+  +M +    PDA   SI+     ++++  +   LL T    G
Sbjct: 571 KVVELLQEMAEKDFSPDASTISIVVDLLSKDEKYREYLHLLPTFPAQG 618



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 86/198 (43%), Gaps = 1/198 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M KE   TV +   L+  L   GK ++A  +F  +      P   TY  LL  L      
Sbjct: 405 MCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHL 464

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +   +E +   P    FN +I+   ++  +E A + F ++   GL P   TY  +
Sbjct: 465 SEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVM 524

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G   +G+ E +  L   M  +G   PNL T+N L+R +C    + +   ++ +MA   
Sbjct: 525 IHGLCKSGQLENAKDLFLGMEEKG-CAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKD 583

Query: 244 MKPDVVTYNTIATAYAQN 261
             PD  T + +    +++
Sbjct: 584 FSPDASTISIVVDLLSKD 601


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 109/383 (28%), Positives = 191/383 (49%), Gaps = 1/383 (0%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD+  +N VI     SG   +A+  F +M + G+ P   TYNT+I G+   G  E   +L
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
            D M  +G  KPN+ TYNVL+   C    + E   +M +MA+  M PD  TY+ +     
Sbjct: 74  RDQMLHDGP-KPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           + GE+     +  E    GV     TC I+++G CK+GK+ +A +    +   G+ P  V
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 192

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           I+N LI G+ ++ D  G   +   MK   + PD ITY+ ++N       + K +++  +M
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 252

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            K+G+ P    ++ L   Y    + EK   +L  M + G   +V+ F +++  +C +G +
Sbjct: 253 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 312

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             A+ + D M    V+PN + + +++  Y E+    +A  +++ MK  GV     T+ LL
Sbjct: 313 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLL 372

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
            +    +    EA+ ++  ++N+
Sbjct: 373 LKGLCRSSQIDEAEELIYTLRNQ 395



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 220/428 (51%), Gaps = 7/428 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++  ++ G  +    + + ++  G KP++VTY  LL+ L    R +    +M ++  + 
Sbjct: 57  MIDGHVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHS 116

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M PD   ++ + +  + +G     +  F +  + G+     T + L+ G    GK  ++ 
Sbjct: 117 MFPDGFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAE 176

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L+++   G V P    YN L+  +C  +++  A+ +  +M +  ++PD +TYN +   
Sbjct: 177 QVLEMLVHTGLV-PTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALING 235

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +     +AE++++EME +GV P+  T   +I  Y   G++++       M++ G+  +
Sbjct: 236 LCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSD 295

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKE 374
           ++ F  ++K F +      + E +A++ +     V P+   Y++I++A+  +G  ++   
Sbjct: 296 VISFGSVVKAFCK---NGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFL 352

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + + M  +G+      Y++L KG  R  + ++AEEL+ T+   G  P+VV + TIIS  C
Sbjct: 353 LVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACC 412

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
           + G  D+A+E+  +M ++G+ P L+T+ TL+   + A +    E + Q M    V P  S
Sbjct: 413 NKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSS 472

Query: 495 TFLLLAEA 502
            + ++ +A
Sbjct: 473 IYGIMVDA 480



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 176/381 (46%), Gaps = 7/381 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L + L   G+ +   ++F   ++ G      T + LL  L    +      ++  +   G
Sbjct: 127 LFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTG 186

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P ++ +N +IN + +  ++  A   F +MK   + P   TYN LI G     K E   
Sbjct: 187 LVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLC---KLEMVT 243

Query: 198 KLLDL---MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           K  DL   M + G V P++ T+N L+ A+     + + + V+  M   G+K DV+++ ++
Sbjct: 244 KAEDLVMEMEKSG-VDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSV 302

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             A+ +NG+  +A  ++ +M +  V PN +    II  Y + G  ++A      MK  GV
Sbjct: 303 VKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGV 362

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
             ++V +NLL+KG       D  +E++  ++   + PDV++Y+TI++A    G  DK  E
Sbjct: 363 SASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALE 422

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +  +M K GI+P    Y  L             E L   M+     P+  I+  ++  + 
Sbjct: 423 LLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYV 482

Query: 435 SDGSMDRAIEVFDKMCEHGVS 455
              +  +   +  +M E G++
Sbjct: 483 RCENDSKVASLKKEMSEKGIA 503



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 138/317 (43%), Gaps = 43/317 (13%)

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PD  +YN +     ++G+   A +V  EM   GV PN  T   +I G+ K G ++   R 
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVN---PDVITYSTIMN 361
              M   G  PN+V +N+L+ G      R G +DE   LM E   +   PD  TYS + +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLC----RAGRMDETRVLMDEMASHSMFPDGFTYSILFD 129

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
             +  G       +F +  K G+   A+  SIL  G  ++ +  KAE++L  ++ +G  P
Sbjct: 130 GLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVP 189

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKM-------------------CE----------- 451
             VI+ T+I+G+C    +  A  +F++M                   C+           
Sbjct: 190 TTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLV 249

Query: 452 -----HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
                 GV P+++TF TL+  Y  A Q  +   +L  M+  G+     +F  + +A    
Sbjct: 250 MEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKN 309

Query: 507 GLTKEAKRILSKIKNKE 523
           G   EA  IL  +  K+
Sbjct: 310 GKIPEAVAILDDMIYKD 326



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 57/244 (23%), Positives = 132/244 (54%), Gaps = 1/244 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   L+++    G+ ++   + +++ + G K  ++++ +++ A     +     +I+
Sbjct: 260 SVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAIL 319

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +    + P++  +N++I+A+ ESG+ E+A     KMK SG++ +  TYN L+KG   +
Sbjct: 320 DDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRS 379

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + +E+ +L+  +  +G ++P++ +YN ++ A CN+ +  +A  ++ +M   G++P + T
Sbjct: 380 SQIDEAEELIYTLRNQG-LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRT 438

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+T+ +A A  G     E +  +M H  V+P+    GI++  Y +     +     + M 
Sbjct: 439 YHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMS 498

Query: 311 EYGV 314
           E G+
Sbjct: 499 EKGI 502



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 87/170 (51%), Gaps = 1/170 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++ IE G  ++A  +   +   G   S+VTY  LL  L    + +    ++  +   G
Sbjct: 337 IIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQG 396

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +N +I+A    G+ ++A++   +M + G+ PT  TY+TL+     AG+  +  
Sbjct: 397 LRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDME 456

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
            L   M  + NV+P+   Y ++V A+   +N ++  ++  +M+  G+  D
Sbjct: 457 CLYQQMLHK-NVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFD 505


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 207/432 (47%), Gaps = 1/432 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A A FN ++     P    +  +L++L   K + ++ S+  Q E NG+ PD    + +IN
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            F    ++  A   F  + + G  P   T NTLIKG    G+ ++++   D +  +G  +
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQG-FQ 159

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
            +  +Y  L+   C          ++ K+    +KPDVV YNTI  +  +N     A +V
Sbjct: 160 LDQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDV 219

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             EM   G+ P+  T   +I G+C  G +KEA      MK   ++PN+  FN+LI    +
Sbjct: 220 YSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSK 279

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
                    +LA+M +  + PDV TY+++++ +     +   K +F  M + G+ PD   
Sbjct: 280 EGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQC 339

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ +  G  + +  ++A  L   M      P++V + ++I G C +  ++RAI +  +M 
Sbjct: 340 YTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMK 399

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E G+ P++ ++  L+ G  ++ +   A+EI Q + A G H     + +L       G   
Sbjct: 400 EQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFD 459

Query: 511 EAKRILSKIKNK 522
           EA  + SK+++K
Sbjct: 460 EALDLKSKMEDK 471



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/416 (26%), Positives = 206/416 (49%), Gaps = 36/416 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+  L  RG+ ++A    + L+  G +   V+Y TL+  L       ++  ++ ++
Sbjct: 129 TLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLLRKL 188

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E + + PD + +N +IN+  ++  + +A D + +M   G++P   TY TLI G+ I G  
Sbjct: 189 EGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGHL 248

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+  LL+ M  + N+ PN+ T+N+L+ A   E  + EA  ++  M  + +KPDV TYN+
Sbjct: 249 KEAFSLLNEMKLK-NINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNS 307

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    E   A+ V   M   GV P+ +    +I+G CK   + EA+     MK   
Sbjct: 308 LIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMK--- 364

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
            H N++                               PD++TY+++++       +++  
Sbjct: 365 -HKNMI-------------------------------PDIVTYNSLIDGLCKNHHLERAI 392

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +   M + GI+PD ++Y+IL  G  +    E A+E+   ++  G+H NV  +T +I+  
Sbjct: 393 ALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRL 452

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           C  G  D A+++  KM + G  P+  TF+ ++    E  +  +AE+IL+ M A G+
Sbjct: 453 CKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/315 (21%), Positives = 128/315 (40%), Gaps = 35/315 (11%)

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           +N ++ +  N K+     ++  +   +G+ PD+ T + +   +        A  V   + 
Sbjct: 60  FNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANIL 119

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
             G  PN  T   +I G C  G+IK+AL F   +   G   + V +  LI G  +  +  
Sbjct: 120 KRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETK 179

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
            V  +L  ++   V PDV+ Y+TI+N+      +    +++ +                 
Sbjct: 180 AVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSE----------------- 222

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
                             MI  G  P+VV +TT+I G+C  G +  A  + ++M    ++
Sbjct: 223 ------------------MIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNIN 264

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           PN+ TF  L+   S+  +   A+ +L +M    + P   T+  L +        K AK +
Sbjct: 265 PNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYV 324

Query: 516 LSKIKNKERTNEMEA 530
              +  +  T +++ 
Sbjct: 325 FYSMAQRGVTPDVQC 339



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 36/208 (17%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V+  T ++N L +     EA ++F  +      P +VTY +L+  L          ++  
Sbjct: 337 VQCYTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCK 396

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++E G+ PD   +  +++   +SG +E+A + F ++              L KGY +  
Sbjct: 397 RMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRL--------------LAKGYHL-- 440

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
                               N+  Y VL+   C      EA ++  KM   G  PD VT+
Sbjct: 441 --------------------NVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTF 480

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGV 279
           + I  A  +  E D+AE+++ EM   G+
Sbjct: 481 DIIIRALFEKDENDKAEKILREMIARGL 508



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/139 (23%), Positives = 64/139 (46%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   L++ L +    + A A+   + E G +P + +YT LL  L    R      I  
Sbjct: 372 IVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQ 431

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G   +   +  +IN   ++G  +EA+D   KM++ G  P   T++ +I+      
Sbjct: 432 RLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIRALFEKD 491

Query: 192 KPEESVKLLDLMSREGNVK 210
           + +++ K+L  M   G +K
Sbjct: 492 ENDKAEKILREMIARGLLK 510


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 220/456 (48%), Gaps = 8/456 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH--KPSLVTYTTLLAALTIQKRFNSIHSI 129
           V S + L+ SL ++GK  +A  +   + EGG    P +V Y T++     +   N    +
Sbjct: 182 VFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDL 241

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ + G+ PD + +++V++A  ++  M++A     +M   G+ P   TYN LI GY  
Sbjct: 242 FKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSS 301

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+ +E+V++   M R+ ++ P++ T+N+L+ + C    I EA +V   MA  G  PDV 
Sbjct: 302 TGQWKEAVRVFKEMRRQ-SILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +YN +   YA  G      ++   M  +G+ P   T  ++I  Y   G + +A+     M
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +++GV PN++ +  +I     I   D   E    M +  V PD   Y  ++  + T G +
Sbjct: 421 RDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 480

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            K KE+  ++   G+  D   +S +     +      A+ +    +  G HP  V+++ +
Sbjct: 481 LKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSML 540

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+C  G M++A+ VFD M   G+ PN   + TL+ GY +  +      + + M   G+
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 600

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
            P    + ++ +     GL +  + + +K+K  E T
Sbjct: 601 KPSTILYNIIID-----GLFEAGRTVPAKVKFHEMT 631



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 210/448 (46%), Gaps = 4/448 (0%)

Query: 78  LMNSLIERGKPQEAQAIF-NNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           L+    E  +  EA  I  +   E G  P + +Y+ LL +L  Q +      ++  + E 
Sbjct: 152 LLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEG 211

Query: 137 G--MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           G    PD + +N VI+ F + G++ +A D F +M + G+ P   TY++++     A   +
Sbjct: 212 GAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMD 271

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++   L  M  +G V PN  TYN L+  + +     EA  V  +M    + PDVVT+N +
Sbjct: 272 KAEAFLRQMVNKG-VLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNML 330

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             +  + G+  +A +V   M   G  P+  +  I+++GY  +G + +       M   G+
Sbjct: 331 MGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGI 390

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P +  FN+LIK +      D    +   M++  V P+V+TY+T++ A    G MD   E
Sbjct: 391 APVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAME 450

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
            F+ M   G+ PD +AY  L +G+       KA+EL+  ++ +G H ++V+F++II+  C
Sbjct: 451 KFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLC 510

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G +  A  +FD     G+ P    +  LM GY    +  +A  +   M + G+ P   
Sbjct: 511 KLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDV 570

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
            +  L       G   E   +  ++  K
Sbjct: 571 VYGTLVNGYCKIGRIDEGLSLFREMLQK 598



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 208/444 (46%), Gaps = 1/444 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + ++++L +     +A+A    ++  G  P+  TY  L+   +   ++     +  ++  
Sbjct: 258 SSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRR 317

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + PD + FN ++ +  + G ++EA D F  M   G  P   +YN ++ GY   G   +
Sbjct: 318 QSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVD 377

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
              L DLM  +G + P + T+NVL++A+ N   + +A  + ++M   G+KP+V+TY T+ 
Sbjct: 378 MTDLFDLMLGDG-IAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVI 436

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            A  + G+ D A E   +M   GV P+      +I G+C  G + +A      +   G+H
Sbjct: 437 AALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMH 496

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            ++V+F+ +I    ++        +  L     ++P  + YS +M+ +   G M+K   +
Sbjct: 497 LDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRV 556

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           FD M  AGI+P+   Y  L  GY +    ++   L   M++ G  P+ +++  II G   
Sbjct: 557 FDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFE 616

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G    A   F +M E G++ N  T+  ++ G  + R    A  + + ++A  V     T
Sbjct: 617 AGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIIT 676

Query: 496 FLLLAEARRATGLTKEAKRILSKI 519
              +      T   +EAK + + I
Sbjct: 677 LNTMIAGMFQTRRVEEAKDLFASI 700



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 206/436 (47%), Gaps = 1/436 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+ +EA  +F  +      P +VT+  L+ +L    +      +   +   G +PD   +
Sbjct: 303 GQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++N ++  G + +  D F  M   G+ P   T+N LIK Y   G  ++++ + + M R
Sbjct: 363 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM-R 421

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +  VKPN+ TY  ++ A C    + +A    ++M   G+ PD   Y+ +   +  +G   
Sbjct: 422 DHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLL 481

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A+E+I E+ +NG+  +      II+  CK G++ +A          G+HP  V++++L+
Sbjct: 482 KAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLM 541

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G+  +   +    V   M    + P+ + Y T++N +   G +D+   +F +M + GIK
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 601

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P    Y+I+  G         A+     M ESG   N   ++ ++ G   +   D AI +
Sbjct: 602 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 661

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F ++    V  ++ T  T++ G  + R+   A+++   +   G+ P   T+ ++      
Sbjct: 662 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIK 721

Query: 506 TGLTKEAKRILSKIKN 521
            GL +EA+ + S ++N
Sbjct: 722 EGLVEEAEDMFSSMQN 737



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 190/386 (49%), Gaps = 2/386 (0%)

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P S  +  +++  + +   E A+  F ++  +GL       N L+KG+  A + +E++
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 166

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG--MKPDVVTYNTIA 255
            +L   + E    P++ +Y++L+++ C++    +A +++  MA  G    PDVV YNT+ 
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVI 226

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + + G+ ++A ++  EM   G+ P+  T   ++   CK   + +A  F R M   GV 
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN   +N LI G+           V   M+   + PDV+T++ +M +    G + + +++
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDV 346

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           FD M   G  PD  +Y+I+  GY  +       +L   M+  G  P +  F  +I  + +
Sbjct: 347 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 406

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G +D+A+ +F++M +HGV PN+ T+ T++       +   A E    M   GV P K  
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 496 FLLLAEARRATGLTKEAKRILSKIKN 521
           +  L +     G   +AK ++S+I N
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMN 492



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 101/424 (23%), Positives = 206/424 (48%), Gaps = 7/424 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM SL + GK +EA+ +F+ +   G  P + +Y  +L     +     +  +  
Sbjct: 324 VVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G+ P    FN +I A++  G +++AM  F +M++ G+ P   TY T+I      G
Sbjct: 384 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIG 443

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +++++  + M  +G V P+   Y+ L++ +C   ++ +A  ++ ++  +GM  D+V +
Sbjct: 444 KMDDAMEKFNQMIDQG-VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLF 502

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           ++I     + G    A+ +     + G+ P      +++ GYC  GK+++ALR    M  
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            G+ PN V++  L+ G+ +I     +DE L+L +E     + P  I Y+ I++    AG 
Sbjct: 563 AGIEPNDVVYGTLVNGYCKI---GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
               K  F +M ++GI  +   YSI+ +G  + +  ++A  L   +       +++   T
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 679

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I+G      ++ A ++F  +   G+ P + T+  ++    +      AE++   M+  G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 489 VHPQ 492
             P 
Sbjct: 740 CEPD 743



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 179/373 (47%), Gaps = 7/373 (1%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   +A  IFN + + G KP+++TYTT++AAL    + +      +Q+ + G+ PD   +
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           + +I  F   G++ +A +   ++  +G+      ++++I      G+  ++  + DL   
Sbjct: 468 HCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G + P    Y++L+  +C    + +A  V   M ++G++P+ V Y T+   Y + G  D
Sbjct: 528 VG-LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRID 586

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +   +  EM   G++P+     III G  + G+   A      M E G+  N   +++++
Sbjct: 587 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 646

Query: 326 KGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +G  +       DE + L KE R   V  D+IT +T++        +++ K++F  + ++
Sbjct: 647 RGLFK---NRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 703

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ P    YSI+    ++E   E+AE++  +M  +G  P+  +   ++        + RA
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763

Query: 443 IEVFDKMCEHGVS 455
                K+ E   S
Sbjct: 764 GAYLSKIDERNFS 776



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 126/251 (50%), Gaps = 1/251 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + ++N+L + G+  +AQ IF+  +  G  P+ V Y+ L+    +  +      +   +  
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++P+ + +  ++N + + G ++E +  F +M + G+ P+T  YN +I G   AG+   
Sbjct: 563 AGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVP 622

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +      M+  G +  N  TY++++R     +   EA  +  ++ A  +K D++T NT+ 
Sbjct: 623 AKVKFHEMTESG-IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMI 681

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               Q    ++A+++   +  +G+ P   T  I+I+   KEG ++EA     +M+  G  
Sbjct: 682 AGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741

Query: 316 PNLVIFNLLIK 326
           P+  + N +++
Sbjct: 742 PDSRLLNHVVR 752



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/263 (22%), Positives = 120/263 (45%), Gaps = 36/263 (13%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LM+     GK ++A  +F+ ++  G +P+ V Y TL+       R +   S+  ++ + G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P +I +N +I+   E+G    A   F +M ESG+     TY+ +++G       +E++
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 659

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   + R  NVK ++ T N ++      + + EA ++   ++ SG+ P VVTY+ + T 
Sbjct: 660 FLFKEL-RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN 718

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGR--------------------------------- 284
             + G  ++AE++   M++ G +P+ R                                 
Sbjct: 719 LIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 778

Query: 285 --TCGIIISGYCKEGKIKEALRF 305
             T  +++  +  +G  +E +RF
Sbjct: 779 HLTTMLLVDLFSSKGTCREHIRF 801



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 24/110 (21%), Positives = 53/110 (48%), Gaps = 1/110 (0%)

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
           G   + P +H Y+IL     R   PE A      ++ +G   +++I   ++ G+C     
Sbjct: 103 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRT 162

Query: 440 DRAIEV-FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           D A+++   +  E G  P++ ++  L+    +  +  +A+++L++M   G
Sbjct: 163 DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGG 212



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/127 (18%), Positives = 54/127 (42%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  ++  + +  + +EA+ +F ++   G  P +VTY+ ++  L  +        + S +
Sbjct: 676 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSM 735

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +  G +PDS   N V+    +   +  A     K+ E   +    T   L+  +   G  
Sbjct: 736 QNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTC 795

Query: 194 EESVKLL 200
            E ++ L
Sbjct: 796 REHIRFL 802


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 223/470 (47%), Gaps = 36/470 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L   G  +EA      +++ G  P   TY  L+  L    R     +++ ++  +G
Sbjct: 284 MISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSG 343

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ + +  +++ F + G   EA D   +M  +G+ P    Y+ LI+G    G+   + 
Sbjct: 344 LKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRAS 403

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL  M + G ++P+  TYN L++    + +   A+ ++++M  SG+ P+V +Y  +   
Sbjct: 404 KLLKEMIKVG-LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMING 462

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             QNGE+ +A  ++ EM   G++PN      +I G+ KEG I  A      M +  VHP+
Sbjct: 463 LCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPD 522

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           L  +N LIKG   +   +  +E  A +++  + PD  TYS +++ +   G ++K  ++  
Sbjct: 523 LFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLR 582

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES-------------------- 417
            M  +G+KP+A  Y+ L +GY +  + EK   +L +M+ S                    
Sbjct: 583 QMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSE 642

Query: 418 ---------------GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
                          G  P++ I++++ISG C    M++A+ + D+M + G+ P +  + 
Sbjct: 643 NMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYN 702

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            L+ G+  +    RA  +   + A G+ P   T+  L +     G   +A
Sbjct: 703 ALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDA 752



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 205/423 (48%), Gaps = 1/423 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++  ++ GK  EA  I   +I  G +P+ + Y  L+  L    +      ++ ++ + G
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD+  +N ++    +  + + A +   +M+ SG+ P   +Y  +I G    G+ +E+ 
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAG 473

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ M  EG +KPN   Y  L+     E NI+ A   + KM  + + PD+  YN++   
Sbjct: 474 NLLEEMISEG-LKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKG 532

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            +  G  ++AEE   +++  G+ P+  T   +I GYCK G +++A +  R M   G+ PN
Sbjct: 533 LSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPN 592

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +  L++G+ +  D + V  +L  M      PD   Y  ++   S +  M+    +  
Sbjct: 593 ADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLT 652

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           ++ K G+ PD H YS L  G  +  + EKA  LL  M + G  P +V +  +I G+C  G
Sbjct: 653 EVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSG 712

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            + RA  VFD +   G+ PN  T+  L+ G  +      A ++ + M   G+ P    + 
Sbjct: 713 DISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYN 772

Query: 498 LLA 500
           +LA
Sbjct: 773 VLA 775



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 207/425 (48%), Gaps = 1/425 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++  + G  + A  +   + + G  P+      LL  L        +  +   +E  G
Sbjct: 179 LVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAG 238

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   ++  I A  ++ + + A   F +M+         TYN +I G   +G  EE+ 
Sbjct: 239 ILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 298

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
              + M   G + P+  TY  L+   C    + EA  ++ +M+ SG+KP++V Y T+   
Sbjct: 299 GFKEEMVDYG-LSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDG 357

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G+  +A +++ EM   GVQPN      +I G CK G++  A +  + M + G+ P+
Sbjct: 358 FMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPD 417

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +N L++G  +  D+DG  E+L  M+   + P+V +Y  ++N     G   +   + +
Sbjct: 418 TFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLE 477

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G+KP+A  Y+ L  G+ +E     A E L  M ++  HP++  + ++I G  + G
Sbjct: 478 EMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVG 537

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M+ A E + ++ + G+ P+  T+  L+ GY +     +A+++L+ M   G+ P   T+ 
Sbjct: 538 RMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYT 597

Query: 498 LLAEA 502
            L E 
Sbjct: 598 DLLEG 602



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 111/414 (26%), Positives = 202/414 (48%), Gaps = 10/414 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   ++N L + G+ +EA  +   +I  G KP+   Y  L+   + +   +     + 
Sbjct: 453 VYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALE 512

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +  + PD   +N++I   S  G MEEA + + ++++ GL P   TY+ LI GY   G
Sbjct: 513 KMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTG 572

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E++ +LL  M   G +KPN  TY  L+  +    +  +  +++  M  SG KPD   Y
Sbjct: 573 NLEKADQLLRQMLNSG-LKPNADTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIY 631

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +    +++   + A  V+ E+E NG+ P+      +ISG CK   +++A+     M +
Sbjct: 632 GIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAK 691

Query: 312 YGVHPNLVIFNLLIKGFVEIMD----RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            G+ P +V +N LI GF    D    R+  D +LA      + P+ +TY+ +++     G
Sbjct: 692 EGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAK----GLVPNCVTYTALIDGNCKNG 747

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +    +++ +M   GI PDA  Y++LA G     + E+A  L   M   G+  NV +F 
Sbjct: 748 DITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-ANVSLFN 806

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           T++ G+C  G +    ++   M +  + PN +T E ++  + +A +   A  + 
Sbjct: 807 TLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAHRVF 860



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 102/366 (27%), Positives = 181/366 (49%), Gaps = 5/366 (1%)

Query: 160 EAMDTFWKMKE----SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
           +AM+  WK+K     +G+ P   TY+T I+ +  A   + + K+ + M R  +   N  T
Sbjct: 222 DAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRR-DCAMNEVT 280

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           YNV++   C    + EA+    +M   G+ PD  TY  +     +     +A+ ++ EM 
Sbjct: 281 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMS 340

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
            +G++PN    G ++ G+ KEGK  EA    + M   GV PN ++++ LI+G  +I    
Sbjct: 341 CSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLG 400

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
              ++L  M +  + PD  TY+ +M         D   E+ ++M  +GI P+ ++Y I+ 
Sbjct: 401 RASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMI 460

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G  +  E ++A  LL  MI  G  PN  ++  +I G   +G++  A E  +KM +  V 
Sbjct: 461 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVH 520

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P+L  + +L+ G S   +   AEE    ++  G+ P + T+  L      TG  ++A ++
Sbjct: 521 PDLFCYNSLIKGLSTVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQL 580

Query: 516 LSKIKN 521
           L ++ N
Sbjct: 581 LRQMLN 586



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 181/383 (47%), Gaps = 1/383 (0%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P +   + +++ + ++G++  A      M + GL PT    N L+K    A   E   KL
Sbjct: 171 PSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKL 230

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
              M   G + P++ TY+  + A C  ++   A  V  +M       + VTYN + +   
Sbjct: 231 KGFMEGAG-ILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLC 289

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           ++G  ++A     EM   G+ P+  T G +++G CK  ++KEA      M   G+ PN+V
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIV 349

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           ++  L+ GF++        ++L  M    V P+ I Y  ++      G + +  ++  +M
Sbjct: 350 VYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEM 409

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            K G++PD   Y+ L +G+ ++ + + A ELL  M  SG  PNV  +  +I+G C +G  
Sbjct: 410 IKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGES 469

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             A  + ++M   G+ PN   +  L+ G+S+      A E L+ M    VHP    +  L
Sbjct: 470 KEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSL 529

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
            +     G  +EA+   ++++ +
Sbjct: 530 IKGLSTVGRMEEAEEYYAQVQKR 552



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 152/306 (49%), Gaps = 2/306 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L++   + G  ++A  +   ++  G KP+  TYT LL        +  + SI+  +
Sbjct: 560 TYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEKVSSILQSM 619

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G  PD+  +  VI   S S NME A     +++++GL P    Y++LI G       
Sbjct: 620 LGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKIADM 679

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E++V LLD M++EG ++P +  YN L+  +C   +I+ A NV   + A G+ P+ VTY  
Sbjct: 680 EKAVGLLDEMAKEG-LEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVPNCVTYTA 738

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     +NG+   A ++  EM   G+ P+     ++ +G      +++AL     M   G
Sbjct: 739 LIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRG 798

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
            + N+ +FN L+ GF +       +++L +M +  + P+  T   +++ +  AG + +  
Sbjct: 799 -YANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREIVPNAQTVEKVVSEFGKAGKLGEAH 857

Query: 374 EIFDDM 379
            +F ++
Sbjct: 858 RVFAEL 863



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/291 (23%), Positives = 128/291 (43%), Gaps = 36/291 (12%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+    +    ++  +I  +++  G KP    Y  ++  L+  +       ++++V
Sbjct: 595 TYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEV 654

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+NG+ PD   ++++I+   +  +ME+A+    +M + GL P    YN LI G+  +G  
Sbjct: 655 EKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDI 714

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +  + D +  +G V PN  TY  L+   C   +IT+A+++  +M   G+ PD   YN 
Sbjct: 715 SRARNVFDSILAKGLV-PNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNV 773

Query: 254 IATAYAQNGEADQAEEVIVEMEHNG----------------------------------V 279
           +AT  +   + +QA  +  EM + G                                  +
Sbjct: 774 LATGCSDAADLEQALFLTEEMFNRGYANVSLFNTLVHGFCKRGKLQETEKLLHVMMDREI 833

Query: 280 QPNGRTCGIIISGYCKEGKIKEALR-FARTMKEYGVHPNLVIFNLLIKGFV 329
            PN +T   ++S + K GK+ EA R FA   ++         F+LL    +
Sbjct: 834 VPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSATDRFSLLFTDMI 884



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 36/170 (21%), Positives = 67/170 (39%)

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
           +P       +++ +   G +    ++   M   G+ P     + L K  +R    E   +
Sbjct: 170 SPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWK 229

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L   M  +G  P+V  ++T I   C     D A +VF++M     + N  T+  ++ G  
Sbjct: 230 LKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLC 289

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            +     A    + M  +G+ P   T+  L          KEAK +L ++
Sbjct: 290 RSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEM 339


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 218/415 (52%), Gaps = 8/415 (1%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A  ++   I  G K    T + LL  L  + +      ++  + E+G+ P  + +N ++N
Sbjct: 226 ALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVN 285

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG---IAGKPEESVKLLDLMSREG 207
            + + G+M+ A+ T  +M+  GL P    +N++I  +    +  K EE VK    M  +G
Sbjct: 286 GYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKK---MVGKG 342

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
            + P++ TYN+L+  +      +  + ++ +M  +G KP+V++Y ++     ++G+  +A
Sbjct: 343 -IAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEA 401

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
           E V+ +M   GV PN     ++I G C  GK++EALRF   M + G+   +V +N LIKG
Sbjct: 402 EMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKG 461

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             ++      +E+  L+      PDVITY+++++ +S AG   KC E+++ M K G+KP 
Sbjct: 462 LCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPT 521

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
            + +  L  G  +E    K E L   M++    P+ V++  +I  +   G + +A  +  
Sbjct: 522 INTFHPLISGCSKEGIKLK-ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQK 580

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           +M + GV P+ KT+ +L+ G+ +  +    ++++  MKA G+ P+  T+ LL + 
Sbjct: 581 EMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQG 635



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 212/455 (46%), Gaps = 35/455 (7%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           + M + ++ G  + A  +F  +      P++  Y  L+  L  +KR      +  ++   
Sbjct: 71  RAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVR 130

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            + P+ + FN +I+ + ++G ++ A+    +MK+  + P+  T+N+L+ G   A + EE+
Sbjct: 131 NLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEA 190

Query: 197 VKLLD---------------------LMSREG--------------NVKPNLRTYNVLVR 221
             +L+                     L S +G               VK +  T ++L+ 
Sbjct: 191 RCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLN 250

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C E  + +A  V+  +   G+ P  V YNTI   Y Q G+ D+A   I +ME  G++P
Sbjct: 251 GLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRP 310

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N      +I  +C+   I +A  + + M   G+ P++  +N+LI G+  +       ++L
Sbjct: 311 NCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQIL 370

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M+E    P+VI+Y +++N     G + + + +  DM   G+ P+A+ Y++L  G    
Sbjct: 371 EEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTV 430

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            +  +A      M ++G    +V + ++I G C  G +  A E+F  +   G  P++ T+
Sbjct: 431 GKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITY 490

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            +L+ GYS A    +  E+ + MK  G+ P  +TF
Sbjct: 491 NSLISGYSNAGNSQKCLELYETMKKLGLKPTINTF 525



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 205/458 (44%), Gaps = 44/458 (9%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD----SIFFNAVI---------- 149
           +PS++T+ +LL+ L   +R      ++++++ NG  PD    SI F+ ++          
Sbjct: 168 EPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAAL 227

Query: 150 ----------------------NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
                                 N   + G +E+A +    + E GL P    YNT++ GY
Sbjct: 228 DLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGY 287

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G  + ++  ++ M   G ++PN   +N ++  +C  + I +A   + KM   G+ P 
Sbjct: 288 CQIGDMDRAILTIEQMESRG-LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPS 346

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           V TYN +   Y +     +  +++ EME NG +PN  + G +I+  CK+GKI EA    R
Sbjct: 347 VETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLR 406

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWS 364
            M   GV PN  I+N+LI G   +     + E L    E   N     ++TY++++    
Sbjct: 407 DMVGRGVLPNANIYNMLIDGSCTV---GKLREALRFFDEMSKNGIGATIVTYNSLIKGLC 463

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G + + +E+F  +   G  PD   Y+ L  GY      +K  EL  TM + G  P + 
Sbjct: 464 KMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTIN 523

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            F  +ISG CS   +     +F++M +  +SP+   +  ++  Y E     +A  + + M
Sbjct: 524 TFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEM 582

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              GV P   T+  L       G   E K ++  +K K
Sbjct: 583 VDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAK 620



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/403 (29%), Positives = 199/403 (49%), Gaps = 15/403 (3%)

Query: 70  RTVRSMTKLMNSLIER----GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           R +R      NS+I++        +A+     ++  G  PS+ TY  L+        F+ 
Sbjct: 306 RGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSR 365

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              I+ ++EENG  P+ I + ++IN   + G + EA      M   G+ P  + YN LI 
Sbjct: 366 CFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLID 425

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G    GK  E+++  D MS+ G +   + TYN L++  C    + EA  +   + ++G  
Sbjct: 426 GSCTVGKLREALRFFDEMSKNG-IGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHC 484

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG-KIKEALR 304
           PDV+TYN++ + Y+  G + +  E+   M+  G++P   T   +ISG  KEG K+KE L 
Sbjct: 485 PDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLKETL- 543

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMN 361
               M +  + P+ V++N +I  + E      V +  +L KE     V PD  TY++++ 
Sbjct: 544 -FNEMLQMNLSPDRVVYNAMIHCYQET---GHVQKAFSLQKEMVDMGVRPDNKTYNSLIL 599

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                G + + K++ DDM   G+ P+A  YS+L +G+   ++   A      M+E+GF P
Sbjct: 600 GHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLP 659

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           NV I   + +G   DG +  A  +  +M  +G+  NL T E L
Sbjct: 660 NVCICNELSTGLRKDGRLQEAQSICSEMIANGMD-NLDTNEDL 701



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 115/466 (24%), Positives = 214/466 (45%), Gaps = 37/466 (7%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +   +++ + + G  PS      ++ +L   K+F+++  +  ++   G  PD + +   +
Sbjct: 14  QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM 73

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTY----------------------------- 180
            A  + G+++ AM+ F  MK   + P    Y                             
Sbjct: 74  LAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133

Query: 181 ------NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
                 NTLI GY  AG+ + ++ L + M +E  V+P++ T+N L+   C  + I EA  
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKE-KVEPSIITFNSLLSGLCKARRIEEARC 192

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGE-ADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
           +++++  +G  PD  TY+ I     ++ + A  A ++  E    GV+ +  TC I+++G 
Sbjct: 193 MLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGL 252

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           CKEGK+++A    +++ E+G+ P  VI+N ++ G+ +I D D     +  M+   + P+ 
Sbjct: 253 CKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNC 312

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           I ++++++ +     +DK +E    M   GI P    Y+IL  GY R     +  ++L  
Sbjct: 313 IAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEE 372

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M E+G  PNV+ + ++I+  C DG +  A  V   M   GV PN   +  L+ G     +
Sbjct: 373 MEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGK 432

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
              A      M   G+     T+  L +     G  KEA+ +   I
Sbjct: 433 LREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLI 478



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 199/450 (44%), Gaps = 43/450 (9%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L + GK ++A+ +  +L+E G  P  V Y T++         +     + Q+E  G
Sbjct: 248 LLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRG 307

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ I FN+VI+ F E   +++A +   KM   G+ P+  TYN LI GYG         
Sbjct: 308 LRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCF 367

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L+ M   G  KPN+ +Y  L+   C +  I EA  V+  M   G+ P+   YN +   
Sbjct: 368 QILEEMEENGE-KPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDG 426

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA--------------- 302
               G+  +A     EM  NG+     T   +I G CK GK+KEA               
Sbjct: 427 SCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPD 486

Query: 303 --------------------LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV---DE 339
                               L    TMK+ G+ P +  F+ LI G      ++G+   + 
Sbjct: 487 VITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISG----CSKEGIKLKET 542

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +   M +  ++PD + Y+ +++ +   G + K   +  +M   G++PD   Y+ L  G++
Sbjct: 543 LFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILGHL 602

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +E +  + ++L+  M   G  P    ++ +I G C     + A   + +M E+G  PN+ 
Sbjct: 603 KEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPNVC 662

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGV 489
               L  G  +  +   A+ I   M A G+
Sbjct: 663 ICNELSTGLRKDGRLQEAQSICSEMIANGM 692



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/188 (28%), Positives = 87/188 (46%), Gaps = 8/188 (4%)

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
           V E+   M++    P       I+ +   +   D   ++F +M   G +PD   Y     
Sbjct: 15  VSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAML 74

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
             V+  + + A EL  TM      PNV ++  +I G C +  +  A ++F +M    + P
Sbjct: 75  AAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVP 134

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF--LL--LAEARRATGLTKEA 512
           N  TF TL+ GY +A +   A  + + MK   V P   TF  LL  L +ARR     +EA
Sbjct: 135 NRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARR----IEEA 190

Query: 513 KRILSKIK 520
           + +L++IK
Sbjct: 191 RCMLNEIK 198



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 34/163 (20%), Positives = 71/163 (43%), Gaps = 7/163 (4%)

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++  S +    +  E++D M + G  P      ++ +  V  ++ +   +L   M+  G
Sbjct: 2   LLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLG 61

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
           F P+ +++   +      G +  A+E+F+ M    V PN+  +  L+ G  + ++   AE
Sbjct: 62  FRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAE 121

Query: 479 EILQIMKAFGVHPQKSTFLLL-------AEARRATGLTKEAKR 514
           ++   M    + P + TF  L        E   A GL +  K+
Sbjct: 122 KLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKK 164


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 221/446 (49%), Gaps = 6/446 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++   ++G  + A  +F  L   G  P+L TY  L+       +F  +  +++++   G
Sbjct: 246 IIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMG 305

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++ +   FN++I+A  + G +++A +    M E G  P  +TYN LI      G+ +E+ 
Sbjct: 306 LNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAE 365

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           + L+  ++E  + PN  +Y  L+ A+C + +   A +++ K+A +G KPD+V+Y      
Sbjct: 366 EFLE-RAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHG 424

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               GE D A  V  +M   GV P+ +   +++SG CK+G+   A      M +  + P+
Sbjct: 425 SVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPD 484

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             ++  L+ GF+   + D   E+  ++    ++P V+ Y+ ++      G M       +
Sbjct: 485 AYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVN 544

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M  A   PD + +S +  GYV++ + + A ++   M++  + PNVV +T++I+G+C   
Sbjct: 545 KMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIA 604

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M RA +VF  M    + PN+ T+  L+ G+S+  +P +A    ++M      P  +TF 
Sbjct: 605 DMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFH 664

Query: 498 LLAEARRATGLTKEAKRILSKIKNKE 523
            L       GLT      L   KN+E
Sbjct: 665 YL-----INGLTNITNTTLLIEKNEE 685



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 190/401 (47%), Gaps = 6/401 (1%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           V Y++LL  +   + F+ I  ++  ++     P     N+VI  ++E G +++A+  F+ 
Sbjct: 94  VAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYM 153

Query: 168 MKE-SGLTPTTSTYNTLIKGYGIAGKPEESVKLLD-LMSREGNVKPNLRTYN----VLVR 221
           + E     P     N+L+      GK + + +L D ++ R G+   +L   N    ++V+
Sbjct: 154 VCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVK 213

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C+   + E   ++     +G  P+VV YN I   Y + G+  +A  V  E++  G  P
Sbjct: 214 GLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLP 273

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
              T G +I G+CK GK +   +    M   G++ N+ +FN +I    +    D   E++
Sbjct: 274 TLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMM 333

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
            +M E    PD+ TY+ ++N   + G + + +E  +   +  + P+  +Y+ L   Y ++
Sbjct: 334 RMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQ 393

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            +   A ++L  + E+G  P++V +   I G  + G +D A+ V +KM E GV P+ + +
Sbjct: 394 GDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIY 453

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
             LM G  +  +   A+ +L  M    + P    +  L + 
Sbjct: 454 NVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDG 494



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 88/405 (21%), Positives = 173/405 (42%), Gaps = 26/405 (6%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T LM++  ++G    A  +   + E G KP LV+Y   +         +    +  ++
Sbjct: 382 SYTPLMHAYCKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKM 441

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E G+ PD+  +N +++   + G    A     +M +  L P    Y TL+ G+    + 
Sbjct: 442 MEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNEL 501

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +++ +L +++  +G + P +  YNV+++  C    +T+A + ++KM  +   PD  T++T
Sbjct: 502 DKATELFEVVMSKG-IDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHST 560

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y +  + D A ++  +M     +PN      +I+G+CK   +  A +  R M+ + 
Sbjct: 561 VIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFN 620

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + PN+V + +LI GF +    +       LM      P+  T+  ++N            
Sbjct: 621 LEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLIN------------ 668

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
                    G+    +   ++ K    E +     +   TMI  G+   +  + +II   
Sbjct: 669 ---------GLTNITNTTLLIEKN--EENDRSLILDFFATMISEGWSQVIATYNSIIVCL 717

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA--RQPWR 476
           C  G +D A  +  KM   G   +   F  L+ G  +    + WR
Sbjct: 718 CKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWR 762



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/378 (21%), Positives = 160/378 (42%), Gaps = 48/378 (12%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+   A  +   ++E G  P    Y  L++ L  + RF +   ++S++ +  + PD+  +
Sbjct: 429 GEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMY 488

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             +++ F  +  +++A + F  +   G+ P    YN +IKG    GK  ++V  ++ M +
Sbjct: 489 ATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKM-K 547

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
             N  P+  T++ ++  +  + ++  A  +  +M     KP+VV Y ++   + +  +  
Sbjct: 548 IANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMS 607

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +AE+V   M+   ++PN  T  I+I G+ K GK ++A  F   M      PN   F+ LI
Sbjct: 608 RAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLI 667

Query: 326 KGFVEIM------------DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
            G   I             DR  + +  A M     +  + TY++I+      G +D  +
Sbjct: 668 NGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQ 727

Query: 374 EIFDDMGKAGIKPDAHAYSILAKG-----------------------------------Y 398
            +   M + G   D+  +S L  G                                   Y
Sbjct: 728 LLQTKMLRKGFLMDSVCFSALLHGLCQTGKSKEWRNIISGDLTKIDFQTAFEYSLKLDKY 787

Query: 399 VREQEPEKAEELLMTMIE 416
           + + +P +A  +L+ +IE
Sbjct: 788 LYDGKPSEASYILLNLIE 805



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 59/260 (22%), Positives = 110/260 (42%), Gaps = 48/260 (18%)

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK----- 371
           N V ++ L+K  V+      ++ VL  MK     P +   ++++  ++  GF+DK     
Sbjct: 92  NNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMF 151

Query: 372 ---CK----------------------------EIFDDMGKAG------IKPDAHAYSIL 394
              C+                            E++D M + G      +  D ++  I+
Sbjct: 152 YMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIV 211

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            KG     + E+  +L+     +G  PNVV +  II G+C  G + RA  VF+++   G 
Sbjct: 212 VKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGF 271

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            P L+T+  L+ G+ +A +    +++L  M   G++     F  + +A+   GL  +A  
Sbjct: 272 LPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAE 331

Query: 515 ILSKIKNKERTNEMEAEEDI 534
           ++  +       EM  E DI
Sbjct: 332 MMRMM------TEMGCEPDI 345



 Score = 39.3 bits (90), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 43/218 (19%), Positives = 86/218 (39%), Gaps = 19/218 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+N   +      A+ +F  +     +P++VTYT L+   +   +     S   
Sbjct: 590 VVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAASFFE 649

Query: 132 QVEENGMDPDSIFFNAVINAFS------------ESGNMEEAMDTFWKMKESGLTPTTST 179
            +  N   P+   F+ +IN  +            E  +    +D F  M   G +   +T
Sbjct: 650 LMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQVIAT 709

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           YN++I      G  + +  L   M R+G +  ++  ++ L+   C      E  N+   +
Sbjct: 710 YNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSV-CFSALLHGLCQTGKSKEWRNI---I 765

Query: 240 AASGMKPDVVT---YNTIATAYAQNGEADQAEEVIVEM 274
           +    K D  T   Y+     Y  +G+  +A  +++ +
Sbjct: 766 SGDLTKIDFQTAFEYSLKLDKYLYDGKPSEASYILLNL 803


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 215/432 (49%), Gaps = 2/432 (0%)

Query: 66  KESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           +E+CR    + + L++ L E G+ +EA  +   ++E G +PS  TYT L+ A       +
Sbjct: 235 EENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTD 294

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
               ++ ++      P+   +  +I+     G +EEA   F KM + GL P   T+N LI
Sbjct: 295 KAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALI 354

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            GY   G    + +LL +M + GN KPN+RTYN L+   C      +A+ ++ ++  +G+
Sbjct: 355 NGYCKEGWVVSAFQLLSVMEK-GNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGL 413

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            PD VTYN +   + + G+ + A  +   M   G++P+G T   +I G CK G++++A  
Sbjct: 414 LPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANG 473

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
              +M + G+  + V F  LI G  +I     V  +   M E R      T++  ++A  
Sbjct: 474 ILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALG 533

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
               +++   +   M K G+ P    ++IL +G+ R  E   + ++L  M ++G  PNV 
Sbjct: 534 KDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVY 593

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +T II+G C++G ++ A  +   M   GVSPN  T+  L+  + +A +  RA +I+  M
Sbjct: 594 TYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTM 653

Query: 485 KAFGVHPQKSTF 496
              G  P    +
Sbjct: 654 VKNGCQPNSHIY 665



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 223/486 (45%), Gaps = 38/486 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV-EEN 136
           ++N+L + G  Q A+     ++  G        T+L+ A   +        +  ++ +E 
Sbjct: 177 VVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFEKMSKEE 236

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
              P+S+ ++ +I+   E+G +EEA     +M E G  P+T TY  LIK     G  +++
Sbjct: 237 NCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKA 296

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +K+LD M+ +  V PN+ TY +L+   C E  I EA  V  KM   G+ P ++T+N +  
Sbjct: 297 MKMLDEMATKACV-PNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITFNALIN 355

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRT--------C---------------------- 286
            Y + G    A +++  ME    +PN RT        C                      
Sbjct: 356 GYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVDNGLLP 415

Query: 287 -----GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
                 I++ G+CKEG++  A     +M   G+ P+   F  LI G  ++   +  + +L
Sbjct: 416 DRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGIL 475

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M +  ++ D +T++ +++     G       +F++M +      AH ++       ++
Sbjct: 476 GSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKD 535

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            +  +A  +L  M++ G  P+VV  T +I G C  G    ++++ ++M + G SPN+ T+
Sbjct: 536 YKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTY 595

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK-IK 520
             ++ G     +   AE IL  M +FGV P   T+ +L +A    G    A +I+S  +K
Sbjct: 596 TIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK 655

Query: 521 NKERTN 526
           N  + N
Sbjct: 656 NGCQPN 661



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/531 (21%), Positives = 232/531 (43%), Gaps = 55/531 (10%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C  + +   L+N   + G    A  + + + +G  KP++ TY  L+  L    +      
Sbjct: 344 CPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFL 403

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++ +V +NG+ PD + +N +++ F + G +  A + F  M  +GL P   T+  LI G  
Sbjct: 404 LLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLC 463

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G+ E++  +L  M ++G +  +  T+  L+   C      +   +   M  +      
Sbjct: 464 KLGRLEQANGILGSMVKKG-ISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTA 522

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            T+N    A  ++ + ++A  ++ +M   G+ P+  T  I+I G+C+ G+   +L+    
Sbjct: 523 HTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLER 582

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           MK+ G  PN+  + ++I G       +  + +L  M  F V+P+  TY+ ++ A   AG 
Sbjct: 583 MKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGR 642

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL------------------ 410
           +D+  +I   M K G +P++H YS L  G+V       A  L                  
Sbjct: 643 LDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDN 702

Query: 411 ---------LMTM---------IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
                    LM +         I+    P   ++  ++ G C +G +  A ++   M +H
Sbjct: 703 NCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDLYNFLVVGLCKEGRIIEADQLTQDMVKH 762

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G+ P+ K   +++  Y +  +     E ++++      P  +++  +    R  G  +EA
Sbjct: 763 GLFPD-KAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVPSFASYCWVIHGLRNEGRVQEA 821

Query: 513 KRILSKIKNKERTNE-----------MEAEEDIP------VESLERLYHKE 546
           ++++S +       E           M+ EED P      ++++E++++KE
Sbjct: 822 QKLVSDLVRHTGIEEEVEVTPSIEFLMKEEEDDPDKCLKLIKAIEQVHYKE 872



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 89/371 (23%), Positives = 159/371 (42%), Gaps = 3/371 (0%)

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
           SE+G + + M     M E G   +   Y+TL+           +  +   M  EG V   
Sbjct: 113 SENG-VVKLMGALDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGG 171

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
           +  Y  +V A C    +  A     K+   G   D     ++  A  +  +  +A  V  
Sbjct: 172 I-DYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVLANCRRDDLGEAFRVFE 230

Query: 273 EM-EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
           +M +    +PN  T  I+I G C+ G+++EA +  + M E G  P+   + +LIK   +I
Sbjct: 231 KMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDI 290

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
              D   ++L  M      P+V TY+ +++     G +++   +F  M K G+ P    +
Sbjct: 291 GMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLKHGLCPGIITF 350

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + L  GY +E     A +LL  M +    PN+  +  ++ G C      +A  +  ++ +
Sbjct: 351 NALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRVVD 410

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
           +G+ P+  T+  L+ G+ +  Q   A  I   M + G+ P   TF  L +     G  ++
Sbjct: 411 NGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQ 470

Query: 512 AKRILSKIKNK 522
           A  IL  +  K
Sbjct: 471 ANGILGSMVKK 481


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/502 (25%), Positives = 240/502 (47%), Gaps = 54/502 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L + GK  EA  +   +I+ G    +VTY+TL+  L ++ R +    +  
Sbjct: 347 VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFM 406

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNM--------------------------------- 158
            +++ G  PD+I +  ++    ++GN+                                 
Sbjct: 407 SMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIID 466

Query: 159 --------EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
                   +EA + F +MK  G+ P   +Y TLI G+ ++GK E++  L + M   G ++
Sbjct: 467 GLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG-IQ 525

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P++ T +VL+   C +  + EA  ++  +   G   DVVT  T+           +A ++
Sbjct: 526 PDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQL 585

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM----KEYGVH--PNLVIFNLL 324
            ++M+  G  PN  TC  ++ G C+ G IK AL   + M      YG++  PN + ++++
Sbjct: 586 FLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSII 645

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G  +    D   E+   MK   V PDVI+Y+++++ +  +G     K +F++M   G+
Sbjct: 646 IDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGV 705

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           +PD   +S+L     +E +  +A ELL  MI+ G  PN V +TT++ G C +  +  A +
Sbjct: 706 QPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEATQ 765

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA----FGVH--PQKSTFLL 498
           +F KM + G  P++ T+ TLM G  +      A E+ + M +    +G +  P   ++ +
Sbjct: 766 LFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSI 825

Query: 499 LAEARRATGLTKEAKRILSKIK 520
           + +     G   EA+ +  ++K
Sbjct: 826 IIDGLCKHGREDEARELFKEMK 847



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 212/429 (49%), Gaps = 19/429 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T L++     GK ++A+ +FN +++ G +P + T + L+  L  + +    + ++ 
Sbjct: 493 VISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLE 552

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            V + G   D +    ++        + +A   F KM++ G  P   T  TL+KG   +G
Sbjct: 553 VVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSG 612

Query: 192 KPEESVKLLDLMSREG-----NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
             + +++L   M  +      N KPN  +Y++++   C      EA  +  +M A G+ P
Sbjct: 613 NIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIP 672

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           DV++Y ++   + ++G+   A+ +  EM   GVQP+  T  ++I   CKEGK+ EA    
Sbjct: 673 DVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELL 732

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAW 363
             M + G  PN V +  L+KG       D + E   L   M++    PDV+TY T+M   
Sbjct: 733 EVMIQRGCIPNTVTYTTLVKGLCM---NDRISEATQLFMKMQKLGCLPDVVTYGTLMKGL 789

Query: 364 STAG----FMDKCKEIFDDMGKAG--IKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
              G     ++  K++  D G+ G   KPD  +YSI+  G  +    ++A EL   M   
Sbjct: 790 CQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKAL 849

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  PNV+ +T++I G+C  G ++ A  +F++M + GV  N  T+  ++ G+ +  Q  +A
Sbjct: 850 GVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKA 909

Query: 478 EEILQIMKA 486
             + Q M+A
Sbjct: 910 --LFQKMEA 916



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/506 (24%), Positives = 236/506 (46%), Gaps = 63/506 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L + GK  EA  +   +I+ G    +VTY+TL+  L ++ R +    +  
Sbjct: 54  VTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFM 113

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNM--------------------------------- 158
            +++ G  PD+I +  ++    ++GN+                                 
Sbjct: 114 SMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIID 173

Query: 159 --------EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
                   +EA + F +MK  G+ P   +Y +LI G+  +GK E++  L + M   G ++
Sbjct: 174 GLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVG-IQ 232

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P++ T  VL+  +C E  + EA  ++  M   G   D+VTY+T+           +A ++
Sbjct: 233 PDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQL 292

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM----KEYG---VHPNLVIFNL 323
            + M+  G +P+    G ++ G C+ GKI  AL   + M     +YG   + P++   ++
Sbjct: 293 FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSM 352

Query: 324 LIKGFVEIMDRDG----VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           LI    +I+ ++G     +E+L +M +     D++TYST++        + +   +F  M
Sbjct: 353 LI----DILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSM 408

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI-ESGFH-----PNVVIFTTIISGW 433
            K G +PDA  Y  L KG  +      A +L   M+ ++G +     P ++ ++ II G 
Sbjct: 409 QKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGL 468

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C D   D A E+F++M   G+ P++ ++ TL+ G+  + +  +A+ +   M   G+ P  
Sbjct: 469 CKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDV 528

Query: 494 STFLLLAEARRATGLTKEAKRILSKI 519
           +T  +L +     G   EA ++L  +
Sbjct: 529 TTSSVLIDMLCKKGKVIEANKLLEVV 554



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 229/490 (46%), Gaps = 27/490 (5%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTT---------LLAALTIQKRFNSIHS 128
           L+N L    +  E  A    ++  G+ P +VTY+          L+  L  + +    + 
Sbjct: 16  LINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEGKVIEANE 75

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++  + + G   D + ++ +I        + EA   F  M++ G  P   TY TL+KG  
Sbjct: 76  LLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLC 135

Query: 189 IAGKPEESVKL----LDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
             G    +++L    L+   R G   KP L +Y++++   C ++   EA  +  +M A G
Sbjct: 136 QTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQG 195

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           M PDV++Y ++   +  +G+ ++A+ +  EM   G+QP+  T G++I  +CKEGK+ EA 
Sbjct: 196 MMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEAN 255

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M   G   ++V ++ LIKG           ++   MK+    PD I Y T+M   
Sbjct: 256 ELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGL 315

Query: 364 STAGFMDKC----KEIFDDMGKAGIK---PDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
              G ++      +E+ +D  + GIK   PD    S+L     +E +  +A ELL  MI+
Sbjct: 316 CQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQ 375

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G   ++V ++T+I G C +  +  A  +F  M + G  P+  T+ TLM G  +      
Sbjct: 376 RGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINI 435

Query: 477 AEEILQ-IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP 535
           A ++ Q ++   G +  K    L++ +    GL K+ +    + + +E   EM+A+  +P
Sbjct: 436 ALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR----EDEARELFEEMKAQGIMP 491

Query: 536 -VESLERLYH 544
            V S   L H
Sbjct: 492 DVISYTTLIH 501



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 118/503 (23%), Positives = 231/503 (45%), Gaps = 53/503 (10%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ S + +++ L +  +  EA+ +F  +   G  P +++YT+L+       ++     + 
Sbjct: 164 TLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLF 223

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++ + G+ PD      +I+ F + G + EA +    M   G      TY+TLIKG  + 
Sbjct: 224 NEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMK 283

Query: 191 GKPEESVKLLDLMSREG-----------------------------------------NV 209
            +  E+ +L   M + G                                          +
Sbjct: 284 HRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCI 343

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +P++ T ++L+   C E  + EA  ++  M   G   D+VTY+T+           +A  
Sbjct: 344 RPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATW 403

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM----KEYGV--HPNLVIFNL 323
           + + M+  G +P+  T G ++ G C+ G I  AL+  + M      YG+   P L+ +++
Sbjct: 404 LFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSI 463

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           +I G  +    D   E+   MK   + PDVI+Y+T+++ +  +G  +K K +F++M   G
Sbjct: 464 IIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           I+PD    S+L     ++ +  +A +LL  +I+ G   +VV  TT++ G C    + +A 
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKAT 583

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA----FGVH--PQKSTFL 497
           ++F KM + G  PN+ T  TLM G  ++     A E+ + M +    +G++  P   ++ 
Sbjct: 584 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 643

Query: 498 LLAEARRATGLTKEAKRILSKIK 520
           ++ +     G   EA+ +  ++K
Sbjct: 644 IIIDGLCKCGREDEARELFKEMK 666



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 211/442 (47%), Gaps = 21/442 (4%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ S + +++ L +  +  EA+ +F  +   G  P +++YTTL+    +  ++     + 
Sbjct: 457 TLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLF 516

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++ + G+ PD    + +I+   + G + EA      + + G      T  TL+KG  + 
Sbjct: 517 NEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMK 576

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS------GM 244
            +  ++ +L   M + G + PN+ T   L++  C   NI  A  +   M +         
Sbjct: 577 HRISKATQLFLKMQKLGCM-PNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINC 635

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           KP+ ++Y+ I     + G  D+A E+  EM+  GV P+  +   +I G+C+ GK K+A  
Sbjct: 636 KPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKY 695

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG----VDEVLALMKEFRVNPDVITYSTIM 360
               M + GV P++  F++LI    +++ ++G     +E+L +M +    P+ +TY+T++
Sbjct: 696 LFNEMVDIGVQPDVTTFSVLI----DMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLV 751

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE---- 416
                   + +  ++F  M K G  PD   Y  L KG  +    + A EL   M+     
Sbjct: 752 KGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQ 811

Query: 417 --SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
             + F P+V+ ++ II G C  G  D A E+F +M   GV PN+ ++ +L+ G+  + + 
Sbjct: 812 YGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKL 871

Query: 475 WRAEEILQIMKAFGVHPQKSTF 496
             A+ +   M   GV     T+
Sbjct: 872 EDAKHLFNEMVDQGVQLNAVTY 893



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 97/393 (24%), Positives = 176/393 (44%), Gaps = 40/393 (10%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G+ PDS  FN +IN       + E +     +   G  P   TY                
Sbjct: 5   GLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTY---------------- 48

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
                      +++P++ T ++L+   C E  + EA  ++  M   G   D+VTY+T+  
Sbjct: 49  -----------SIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIK 97

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM----KEY 312
                    +A  + + M+  G +P+  T G ++ G C+ G I  AL+  + M      Y
Sbjct: 98  GLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRY 157

Query: 313 GV--HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           G+   P L+ ++++I G  +    D   E+   MK   + PDVI+Y+++++ +  +G  +
Sbjct: 158 GIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWE 217

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K K +F++M   GI+PD     +L   + +E +  +A ELL  M+  G   ++V ++T+I
Sbjct: 218 KAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLI 277

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA----EEILQIMKA 486
            G C    +  A ++F  M + G  P+   + TLM G  +  +   A    +E+L     
Sbjct: 278 KGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQ 337

Query: 487 FG---VHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +G   + P  +T  +L +     G   EA  +L
Sbjct: 338 YGIKCIRPDVTTSSMLIDILCKEGKVIEANELL 370



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/321 (24%), Positives = 142/321 (44%), Gaps = 21/321 (6%)

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT---------IA 255
           R   + P+  T+N+L+   CN K + E    M  +   G  PD+VTY+          + 
Sbjct: 2   RLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLI 61

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G+  +A E++  M   G   +  T   +I G C E +I EA     +M++ G  
Sbjct: 62  DILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCR 121

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKE---------FRVNPDVITYSTIMNAWSTA 366
           P+ + +  L+KG  +      ++  L L +E          +  P +I+YS I++     
Sbjct: 122 PDAITYGTLMKGLCQ---TGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKD 178

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
              D+ +E+F +M   G+ PD  +Y+ L  G+    + EKA+ L   M++ G  P+V   
Sbjct: 179 RREDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTS 238

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
             +I  +C +G +  A E+ + M   G   ++ T+ TL+ G     +   A ++   MK 
Sbjct: 239 GVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKK 298

Query: 487 FGVHPQKSTFLLLAEARRATG 507
            G  P    +  L +    TG
Sbjct: 299 LGCRPDAIAYGTLMKGLCQTG 319



 Score = 43.9 bits (102), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 29/138 (21%), Positives = 58/138 (42%), Gaps = 9/138 (6%)

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT---------I 429
           M  AG+ PD+  ++IL       +   +    +  ++  G+ P++V ++          +
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I   C +G +  A E+ + M + G   ++ T+ TL+ G     +   A  +   M+  G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 490 HPQKSTFLLLAEARRATG 507
            P   T+  L +    TG
Sbjct: 121 RPDAITYGTLMKGLCQTG 138


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 211/456 (46%), Gaps = 7/456 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++  ++NSL    +   A +    +++ GH+P   T+TTL+  L ++ +      +  
Sbjct: 80  VYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFD 139

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  P+ + +  +IN   +   + EA + F +M   G++P   TYN+LI G     
Sbjct: 140 KMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLC 199

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +    L++ M  +  + P++ T N +V A C E  + EA +V+  M   G++P+VVTY
Sbjct: 200 EWKHVTTLMNEMV-DSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTY 258

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   +    E D A +V   M H     N  +   +I+GYCK   + +A+     M  
Sbjct: 259 NALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSR 318

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGF 368
             + PN V +N LI G   +     + + ++L  E       PD++TY T+ +       
Sbjct: 319 QELTPNTVTYNTLIHGLCHV---GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRH 375

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +DK   +   +  +   PD   Y+ +  G  R  E E A +L   +   G  PNV  +  
Sbjct: 376 LDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNI 435

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G C  G +  A ++F +M ++G SPN  T+  +  G+    +  R  E+L+ M A G
Sbjct: 436 MIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARG 495

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
                ST  LL       GL +  K+IL K  +  R
Sbjct: 496 FSVDVSTTTLLVGMLSDDGLDQSVKQILCKPSSSSR 531



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 211/465 (45%), Gaps = 43/465 (9%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            EA + FN ++     PS V +  LL ++   K  +++ S+  Q++  G+ PD      V
Sbjct: 27  DEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIV 86

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           IN+      ++ A     K+ + G  P  +T+ TLI+G  + GK  E++ L D M  EG 
Sbjct: 87  INSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG- 145

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY----------------- 251
            +PN+ TY  L+   C ++ +TEA+N+  +M   G+ P++VTY                 
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 252 ------------------NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
                             NT+  A  + G   +A +V+  M H GV+PN  T   ++ G+
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           C   ++  A++   TM       N++ +N LI G+ +I   D    +   M    + P+ 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNT 325

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           +TY+T+++     G +     +F +M   G  PD   Y  L+    + +  +KA  LL  
Sbjct: 326 VTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKA 385

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           +  S + P++ I+TTI+ G C  G ++ A ++F  +   G+ PN+ T+  ++ G  +   
Sbjct: 386 IEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGL 445

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLA-------EARRATGLTKE 511
              A ++   M   G  P   T+ L+        EA R   L +E
Sbjct: 446 LAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEE 490



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 183/379 (48%), Gaps = 14/379 (3%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            +A + FN ++     PS V +T LL ++   K ++++ S+ +Q++  G+ PD    N +
Sbjct: 563 DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNIL 622

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           IN+F     +  A     K+ + G  P   TY TL+ G            L  ++++   
Sbjct: 623 INSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNG------------LCKMITK--G 668

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           + P++ TYN L+ A CN         ++++M  S + P+VV ++T+  A  + G    A 
Sbjct: 669 ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAH 728

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           +V+  M   GV+P+  T   ++ G+C   ++ EA++   TM   G  PN+  +N+LI G+
Sbjct: 729 DVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGY 788

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +I   D    +L  M    +  D +TY+T+++     G +     +F +M  +G  PD 
Sbjct: 789 CQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDL 848

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y IL     +     +A  LL  +  S    +++++   I G C  G ++ A ++F  
Sbjct: 849 VTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSN 908

Query: 449 MCEHGVSPNLKTFETLMWG 467
           +   G+ P+++T+  ++ G
Sbjct: 909 LSSKGLQPDVRTYNIMIHG 927



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 176/347 (50%), Gaps = 7/347 (2%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN---VKPNLR 214
           ++EA+ TF +M      P+T  +N L+       K +    LL L SR+ +   + P++ 
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTS---IAKTKHHSTLLSL-SRQMDSFGIPPDVY 81

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           T  +++ + C+   +  A++ + K+   G +PD  T+ T+       G+  +A  +  +M
Sbjct: 82  TLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKM 141

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G QPN  T G +I+G CK+ ++ EA      M   G+ PN+V +N LI G  ++ + 
Sbjct: 142 IGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEW 201

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
             V  ++  M + ++ PDV T +T+++A    G + +  ++ D M   G++P+   Y+ L
Sbjct: 202 KHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNAL 261

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G+    E + A ++  TM+      NV+ + T+I+G+C   S+D+A+ +F++M    +
Sbjct: 262 MDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQEL 321

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           +PN  T+ TL+ G     +   A  +   M A G  P   T+  L++
Sbjct: 322 TPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSD 368



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 148/287 (51%), Gaps = 1/287 (0%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           +I  G  P + TY +L+ AL     +  + ++++++  + + P+ + F+ V++A  + G 
Sbjct: 664 MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGM 723

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           +  A D    M + G+ P   TY  L+ G+ +  + +E+VK+ D M  +G V PN+R+YN
Sbjct: 724 IAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCV-PNVRSYN 782

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +L+  +C  + + +A  ++ +M+  G+  D VTYNT+       G    A  +  EM  +
Sbjct: 783 ILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVAS 842

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G  P+  T  I++   CK   + EA+   + ++   +  +++++N+ I G     + +  
Sbjct: 843 GQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAA 902

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
            ++ + +    + PDV TY+ +++     G +D+  ++F  M +  I
Sbjct: 903 RDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDI 949



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 67/246 (27%), Positives = 120/246 (48%), Gaps = 1/246 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V   + ++++L + G    A  + + +I+ G +P +VTYT L+    ++   +    +  
Sbjct: 708 VVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFD 767

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  P+   +N +IN + +   M++AM    +M   GL   T TYNTLI G    G
Sbjct: 768 TMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVG 827

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + ++ L   M   G + P+L TY +L+   C   ++ EA  ++  +  S +  D++ Y
Sbjct: 828 RLQHAIALFHEMVASGQI-PDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVY 886

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N       + GE + A ++   +   G+QP+ RT  I+I G CK G + EA +  R M E
Sbjct: 887 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE 946

Query: 312 YGVHPN 317
             +  N
Sbjct: 947 NDIWSN 952



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/273 (24%), Positives = 117/273 (42%), Gaps = 14/273 (5%)

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           + EAL     M      P+ V FN L+    +      +  +   M  F + PDV T + 
Sbjct: 26  LDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAI 85

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++N+      +D        + K G +PDA  ++ L +G   E +  +A  L   MI  G
Sbjct: 86  VINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDKMIGEG 145

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
           F PNVV + T+I+G C D  +  A  +F +M   G+SPN+ T+ +L+ G  +  +     
Sbjct: 146 FQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVT 205

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK------------ERTN 526
            ++  M    + P   T   + +A    G+  EA  ++  + ++               +
Sbjct: 206 TLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGH 265

Query: 527 EMEAEEDIPVESLERLYHKE--ATTASYPNLLQ 557
            +  E D+ V+  + + HK+  A   SY  L+ 
Sbjct: 266 CLRNEVDVAVKVFDTMVHKDCVANVISYNTLIN 298



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/274 (19%), Positives = 111/274 (40%)

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           ++NT  +        D+A      M H    P+      +++   K       L  +R M
Sbjct: 12  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 71

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
             +G+ P++    ++I     +   D     LA + +    PD  T++T++      G +
Sbjct: 72  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 131

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +   +FD M   G +P+   Y  L  G  ++++  +A  +   MI  G  PN+V + ++
Sbjct: 132 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSL 191

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G C          + ++M +  + P++ T  T++    +      A +++ +M   GV
Sbjct: 192 IHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGV 251

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            P   T+  L +          A ++   + +K+
Sbjct: 252 EPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 285


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 226/449 (50%), Gaps = 9/449 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++L ++G+  +A+ +  ++   G  P+  TY  L+             +++  + +N 
Sbjct: 249 ILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N +IN     G +EEA     +M+   L P   +YNTLI G     K  E+ 
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAF 368

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL+ MS +G VKPN  T+N++V+ +C E  + +A N + KM  SG  PD VTYNT+   
Sbjct: 369 KLLEEMSEKG-VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLING 427

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G   +A   + EM    ++ +  T   I+   C+E K++EA +   + ++ G   +
Sbjct: 428 YCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFID 487

Query: 318 LVIFNLLIKGFVEIMDRDG-VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
            V +  LI G+     +DG VD  L L   MKE  + P  +TY+ I+      G  ++  
Sbjct: 488 EVSYGTLIVGYF----KDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAI 543

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
              +++ ++G+ PD   Y+ +  GY RE + EKA +    M+E+ F P+V     ++ G 
Sbjct: 544 SKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGL 603

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C +G +++A+++F+     G + +  T+ TL+    +  +   A  +L  M+   + P  
Sbjct: 604 CMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDH 663

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK 522
            T+  +  A   +G  +EA+  +SK+  K
Sbjct: 664 YTYNAIITALTDSGRIREAEEFMSKMLEK 692



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 218/424 (51%), Gaps = 10/424 (2%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE---- 134
           + + ++ G+P  A  IF  +     +P+L+T  TLL +L    R+ S HS+    E    
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLV---RYPSSHSVSFSREAFND 198

Query: 135 --ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
             + G+ P+   FN VI  +      ++A++    M +   +P   TYNT++      G+
Sbjct: 199 AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGR 258

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             ++  LL  M   G + PN  TYN+LV  +C    + EA NV+  M  + + PDV TYN
Sbjct: 259 LGDARDLLMDMKSRG-LLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYN 317

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +       G  ++A ++  EME+  + P+  +   +I+G  +  KI EA +    M E 
Sbjct: 318 MLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEK 377

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           GV PN V  N+++K + +    D     +  M+E   +PD +TY+T++N +  AG M + 
Sbjct: 378 GVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA 437

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
               D+MG+  +K D+   + + +   RE++ E+A +LL +  + G+  + V + T+I G
Sbjct: 438 FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVG 497

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +  DG++DRA++++D+M E  + P+  T+  ++ G  +  +  +A   L  +   G+ P 
Sbjct: 498 YFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPD 557

Query: 493 KSTF 496
           ++T+
Sbjct: 558 ETTY 561



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 151/330 (45%), Gaps = 13/330 (3%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  ++ +L    K +EA  + ++  + G+    V+Y TL+         +    +  ++
Sbjct: 455 TLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEM 514

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +E  + P ++ +N +I    + G  E+A+    ++ ESGL P  +TYNT++ GY   G  
Sbjct: 515 KEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDV 574

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E++ +  + M  E + KP++ T N+L+R  C E  + +A  + +   + G   D VTYNT
Sbjct: 575 EKAFQFHNKMV-ENSFKPDVFTCNILLRGLCMEGVLEKALKLFNTWVSKGKAIDTVTYNT 633

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           + T+  + G  D A  ++ EME   + P+  T   II+     G+I+EA  F   M E G
Sbjct: 634 LITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKG 693

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P+            +++  D  + V+        +   + YS  +    T G      
Sbjct: 694 NLPD------------QVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAM 741

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
            IF +  + GI  D   Y  L  G ++ ++
Sbjct: 742 RIFGESKQKGITVDKSTYINLMDGLIKRRK 771



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 145/280 (51%), Gaps = 7/280 (2%)

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P     +T   AY Q+G+   A ++  +M+   ++PN  TC  +++   +      ++ F
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPS-SHSVSF 191

Query: 306 AR----TMKEYGVHPNLVIFNLLIKGF-VEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           +R       + G+ PN+  FN++I G+ +E   +D V E L +M ++  +PD +TY+TI+
Sbjct: 192 SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAV-EFLNVMGKYNCSPDNVTYNTIL 250

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           +     G +   +++  DM   G+ P+ + Y+IL  GY +    ++A  ++  M ++   
Sbjct: 251 DTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLL 310

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+V  +  +I+G C++G ++ A ++ D+M    + P++ ++ TL+ G  E  +   A ++
Sbjct: 311 PDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKL 370

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           L+ M   GV P   T  ++ +     G   +A   ++K++
Sbjct: 371 LEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKME 410



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 109/230 (47%), Gaps = 11/230 (4%)

Query: 303 LRFARTMKEYGVH--------PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           L F  T + + +H        P+  + +  I  +V+        ++   MK  R+ P+++
Sbjct: 112 LGFIATDRRHDLHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLL 171

Query: 355 TYSTIMNA---WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           T +T++N+   + ++  +   +E F+D  K GI P+ + ++I+  GY  E + + A E L
Sbjct: 172 TCNTLLNSLVRYPSSHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFL 231

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M +    P+ V + TI+   C  G +  A ++   M   G+ PN  T+  L++GY + 
Sbjct: 232 NVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKM 291

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
                A  ++++M    + P   T+ +L       G  +EA ++  +++N
Sbjct: 292 GWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMEN 341



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 29/129 (22%), Positives = 60/129 (46%), Gaps = 3/129 (2%)

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG---WCSDGSMDRAIEVFDKMCEHG 453
            YV+  +P  A ++   M      PN++   T+++    + S  S+  + E F+   + G
Sbjct: 144 AYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLVRYPSSHSVSFSREAFNDAIKLG 203

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           + PN+ TF  +++GY    +   A E L +M  +   P   T+  + +     G   +A+
Sbjct: 204 IVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDAR 263

Query: 514 RILSKIKNK 522
            +L  +K++
Sbjct: 264 DLLMDMKSR 272


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 226/449 (50%), Gaps = 9/449 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++L ++G+  +A+ +  ++   G  P+  TY  L+             +++  + +N 
Sbjct: 249 ILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNN 308

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N +IN     G +EEA     +M+   L P   +YNTLI G     K  E+ 
Sbjct: 309 LLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAF 368

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL+ MS +G VKPN  T+N++V+ +C E  + +A N + KM  SG  PD VTYNT+   
Sbjct: 369 KLLEEMSEKG-VKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLING 427

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G   +A   + EM    ++ +  T   I+   C+E K++EA +   + ++ G   +
Sbjct: 428 YCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFID 487

Query: 318 LVIFNLLIKGFVEIMDRDG-VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
            V +  LI G+     +DG VD  L L   MKE  + P  +TY+ I+      G  ++  
Sbjct: 488 EVSYGTLIVGYF----KDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAI 543

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
              +++ ++G+ PD   Y+ +  GY RE + EKA +    M+E+ F P+V     ++ G 
Sbjct: 544 SKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGL 603

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C +G +++A+++F+     G + +  T+ TL+    +  +   A  +L  M+   + P  
Sbjct: 604 CMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDH 663

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK 522
            T+  +  A   +G  +EA+  +SK+  K
Sbjct: 664 YTYNAIITALTDSGRIREAEEFMSKMLEK 692



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 218/424 (51%), Gaps = 10/424 (2%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE---- 134
           + + ++ G+P  A  IF  +     +P+L+T  TLL +L    R+ S HS+    E    
Sbjct: 142 IGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSLV---RYPSSHSVSFSREAFND 198

Query: 135 --ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
             + G+ P+   FN VI  +      ++A++    M +   +P   TYNT++      G+
Sbjct: 199 AIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGR 258

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             ++  LL  M   G + PN  TYN+LV  +C    + EA NV+  M  + + PDV TYN
Sbjct: 259 LGDARDLLMDMKSRG-LLPNRNTYNILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYN 317

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +       G  ++A ++  EME+  + P+  +   +I+G  +  KI EA +    M E 
Sbjct: 318 MLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEK 377

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           GV PN V  N+++K + +    D     +  M+E   +PD +TY+T++N +  AG M + 
Sbjct: 378 GVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEA 437

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
               D+MG+  +K D+   + + +   RE++ E+A +LL +  + G+  + V + T+I G
Sbjct: 438 FRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVG 497

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +  DG++DRA++++D+M E  + P+  T+  ++ G  +  +  +A   L  +   G+ P 
Sbjct: 498 YFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPD 557

Query: 493 KSTF 496
           ++T+
Sbjct: 558 ETTY 561



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/408 (26%), Positives = 191/408 (46%), Gaps = 1/408 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G  +EA  +   + +    P + TY  L+  L  + R      +  ++E   + PD + +
Sbjct: 292 GWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSY 351

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +IN   E   + EA     +M E G+ P   T+N ++K Y   GK +++   +  M  
Sbjct: 352 NTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEE 411

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G   P+  TYN L+  +C   N+ EA+  M +M    MK D VT NTI     +  + +
Sbjct: 412 SG-FSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLE 470

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A +++      G   +  + G +I GY K+G +  AL+    MKE  + P+ V +N +I
Sbjct: 471 EAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCII 530

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G  +    +     L  + E  + PD  TY+TI++ +   G ++K  +  + M +   K
Sbjct: 531 GGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFK 590

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD    +IL +G   E   EKA +L  T +  G   + V + T+I+  C +G +D A  +
Sbjct: 591 PDVFTCNILLRGLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNL 650

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
             +M E  + P+  T+  ++   +++ +   AEE +  M   G  P +
Sbjct: 651 LSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPXQ 698



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 189/394 (47%), Gaps = 18/394 (4%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P     +  I A+ +SG    A   F KMK   L P   T NTL+    +      SV  
Sbjct: 133 PSKALLDTAIGAYVQSGQPHHAFQIFKKMKRLRLRPNLLTCNTLLNSL-VRYPSSHSVSF 191

Query: 200 LDLMSREG-------NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
               SRE         + PN+ T+N+++  +C E    +A   ++ M      PD VTYN
Sbjct: 192 ----SREAFNDAIKLGIVPNVNTFNIVIYGYCLENKFKDAVEFLNVMGKYNCSPDNVTYN 247

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           TI  A  + G    A +++++M+  G+ PN  T  I++ GYCK G +KEA      M + 
Sbjct: 248 TILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVIELMTQN 307

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFM 369
            + P++  +N+LI G   + +   ++E   L   M+  ++ PDV++Y+T++N       +
Sbjct: 308 NLLPDVWTYNMLING---LCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKI 364

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +  ++ ++M + G+KP+A  ++I+ K Y +E + + A   +  M ESGF P+ V + T+
Sbjct: 365 SEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTL 424

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I+G+C  G+M  A    D+M    +  +  T  T++      ++   A ++L   +  G 
Sbjct: 425 INGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGY 484

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
              + ++  L       G    A ++  ++K KE
Sbjct: 485 FIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKE 518



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 132/559 (23%), Positives = 234/559 (41%), Gaps = 88/559 (15%)

Query: 3   KFAEGKAFLQTDDKYQSGSTIVKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQT---- 58
           KF +   FL    KY      V          KK   G+ + L  + K     P      
Sbjct: 223 KFKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYN 282

Query: 59  -----HCSFCMNKESCRTVRSMTK------------LMNSLIERGKPQEAQAIFNNLIEG 101
                +C     KE+   +  MT+            L+N L   G+ +EA  + + +   
Sbjct: 283 ILVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENL 342

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
              P +V+Y TL+       + +    ++ ++ E G+ P+++  N ++  + + G M++A
Sbjct: 343 KLLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDA 402

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
            +T  KM+ESG +P   TYNTLI GY  AG   E+ + +D M R+ N+K +  T N ++R
Sbjct: 403 SNTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRK-NMKMDSVTLNTILR 461

Query: 222 AWCNEKNITEAWNVMHKMAASG------------------------------MK-----P 246
             C EK + EA+ ++      G                              MK     P
Sbjct: 462 TLCREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIP 521

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
             VTYN I     Q G+ +QA   + E+  +G+ P+  T   I+ GYC+EG +++A +F 
Sbjct: 522 STVTYNCIIGGLCQCGKTEQAISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFH 581

Query: 307 RTMKEYGVHPNLVIFNLLIKGF-VEIMDRDGVDEVLALMKEFRVNP---DVITYSTIMNA 362
             M E    P++   N+L++G  +E M    +++ L L   +       D +TY+T++ +
Sbjct: 582 NKMVENSFKPDVFTCNILLRGLCMEGM----LEKALKLFNTWVSKGKAIDTVTYNTLITS 637

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G +D    +  +M +  + PD + Y+ +           +AEE +  M+E G  P 
Sbjct: 638 LCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDSGRIREAEEFMSKMLEKGXLPX 697

Query: 423 VVI-----------------------FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
            V+                       ++  I   C++G    A+ +F +  + G++ +  
Sbjct: 698 QVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTEGKYKDAMRIFGESKQKGITVDKS 757

Query: 460 TFETLMWGYSEARQPWRAE 478
           T+  LM G  + R+    E
Sbjct: 758 TYINLMDGLIKRRKSISKE 776


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 233/493 (47%), Gaps = 8/493 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++  +  G   EA  +   ++  G +P+ +TY  L+  L    + +    ++ Q+  + 
Sbjct: 228 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 287

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD+I +N +I       N ++A     +M+ +G++P   TY+ +I G   +G+PE++ 
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 347

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ M+ +G +KPN   Y  L+  +C E N++ A  +  KM    + PD+  YN++   
Sbjct: 348 DLLEEMTTKG-LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFG 406

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            ++ G  +++ +   +M+  G+ PN  T   +I GY K G ++ A +  + M + G+ PN
Sbjct: 407 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 466

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            VI+  L++ + +  D + V      M +  V  D   Y  +++  S++G M+    +  
Sbjct: 467 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 526

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           ++ K G  PD H YS L  G  +  + EKA  +L  M + G  PN+V +  +I G C  G
Sbjct: 527 EIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSG 586

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +  A  VF+ +   G+ PN  T+ +L+ G  +      A  +   M A G+ P    + 
Sbjct: 587 DISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYS 646

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI-------PVESLERLYHKEATTA 550
           +L     + G  ++A  ++ ++  +   +       +        ++   +L H      
Sbjct: 647 VLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 706

Query: 551 SYPNLLQIPNVVS 563
             PN L I N++S
Sbjct: 707 LVPNALTIENIIS 719



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 219/450 (48%), Gaps = 1/450 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++R    L+  L+          +   ++  G  P + TY+TL+ A    + F++   ++
Sbjct: 81  SIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVL 140

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ E G   +++ +N +I     SG +EEA      M++ GL P   TY  LI G   +
Sbjct: 141 VEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKS 200

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +  E+  LLD MS    +KPN+  Y  L+  +  E N  EA+ ++ +M A+G++P+ +T
Sbjct: 201 RRSNEAKALLDEMSC-AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKIT 259

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +     + G+ D+A  ++ +M  +  +P+  T  +II G+ +    K+A R    M+
Sbjct: 260 YDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEME 319

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ PN+  ++++I G  +  + +   ++L  M    + P+   Y+ +++ +   G + 
Sbjct: 320 NAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVS 379

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              EIFD M K  + PD + Y+ L  G  +    E++ +    M E G  PN   ++ +I
Sbjct: 380 LACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLI 439

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+  +G ++ A ++  +M + G+ PN   +  L+  Y ++    +     + M   GV 
Sbjct: 440 HGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVM 499

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIK 520
                + +L     ++G  + A R+LS+I+
Sbjct: 500 LDNRIYGILIHNLSSSGNMEAAFRVLSEIE 529



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 210/433 (48%), Gaps = 1/433 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R+   +  L+++  + G+ Q+A  +   + + G  PS+     LL  L        +  +
Sbjct: 45  RSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKV 104

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
              +   G+ PD   ++ +I A+ +    + A     +M+E G    T TYN LI G   
Sbjct: 105 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 164

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +G  EE+      M   G V P+  TY  L+   C  +   EA  ++ +M+ + +KP+VV
Sbjct: 165 SGAVEEAFGFKKDMEDYGLV-PDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV 223

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y  +   + + G AD+A ++I EM   GVQPN  T   ++ G CK G++  A    + M
Sbjct: 224 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 283

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
                 P+ + +NL+I+G     ++     +L+ M+   ++P+V TYS +++    +G  
Sbjct: 284 VRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEP 343

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +K  ++ ++M   G+KP+A  Y+ L  GY RE     A E+   M +    P++  + ++
Sbjct: 344 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 403

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G    G ++ + + F +M E G+ PN  T+  L+ GY +      AE+++Q M   G+
Sbjct: 404 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 463

Query: 490 HPQKSTFLLLAEA 502
            P    ++ L E+
Sbjct: 464 KPNDVIYIDLLES 476



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 201/433 (46%), Gaps = 46/433 (10%)

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           SIH  +S   ++G    ++  + +++ + +SG +++A +    M++ GL P+    N L+
Sbjct: 34  SIHRALS---DSGHRSPAVL-DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALL 89

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           K    A       K+ + M   G + P++ TY+ L+ A+C  +    A  V+ +M   G 
Sbjct: 90  KDLLRADAMALLWKVREFMVGAG-ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGC 148

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
             + VTYN +     ++G  ++A     +ME  G+ P+G T G +I+G CK  +  EA  
Sbjct: 149 GLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKA 208

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMN 361
               M    + PN+V++  LI GF   M     DE   ++KE     V P+ ITY  ++ 
Sbjct: 209 LLDEMSCAELKPNVVVYANLIDGF---MREGNADEAFKMIKEMVAAGVQPNKITYDNLVR 265

Query: 362 AWSTAGFMDKCK-----------------------------------EIFDDMGKAGIKP 386
                G MD+                                      +  +M  AGI P
Sbjct: 266 GLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISP 325

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           + + YSI+  G  +  EPEKA +LL  M   G  PN  ++  +ISG+C +G++  A E+F
Sbjct: 326 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIF 385

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           DKM +  V P+L  + +L++G S+  +   + +    M+  G+ P + T+  L       
Sbjct: 386 DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKN 445

Query: 507 GLTKEAKRILSKI 519
           G  + A++++ ++
Sbjct: 446 GDLESAEQLVQRM 458



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 33/267 (12%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + G    A+ +FN+++  G  P+ VTYT+L+         ++   + +++   G
Sbjct: 578 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG 637

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD+  ++ +    S +G++E+AM    +M   G   + S++N L+ G+   GK +E++
Sbjct: 638 ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETL 696

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM-------------------HK 238
           KLL ++   G V PN  T   ++        ++E   +                      
Sbjct: 697 KLLHVIMGRGLV-PNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMD 755

Query: 239 MAASGMKP-DVVTYNTIATAYAQNGEADQA---EEVIVEMEHNGVQPNGRTCGI-IISGY 293
           M   G  P DVV  + +   + + G  D+A    +VIV        P G +  + I+   
Sbjct: 756 MINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKS----APMGCSSYLAIVDNL 809

Query: 294 CKEGKIKEALRFARTMKEYG-VHPNLV 319
           C++GK+ EAL   + M + G + P LV
Sbjct: 810 CRKGKLSEALNLLKEMDKRGNLQPTLV 836



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 70/166 (42%)

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++ +  +G +    E+   M   G+ P     + L K  +R        ++   M+ +
Sbjct: 52  VLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 111

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  P+V  ++T+I  +C     D A +V  +M E G   N  T+  L+ G   +     A
Sbjct: 112 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 171

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
               + M+ +G+ P   T+  L      +  + EAK +L ++   E
Sbjct: 172 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAE 217



 Score = 43.5 bits (101), Expect = 0.39,   Method: Compositional matrix adjust.
 Identities = 31/161 (19%), Positives = 72/161 (44%), Gaps = 18/161 (11%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ S   L++   +RGK QE   + + ++  G  P+ +T   +++ L+   + + +H+I 
Sbjct: 675 SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIF 734

Query: 131 SQVEENGMDP-----DSIFFNAV-------------INAFSESGNMEEAMDTFWKMKESG 172
            ++++   +       S+F + +             I    + GN+++A+     +    
Sbjct: 735 VELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKS 794

Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
                S+Y  ++      GK  E++ LL  M + GN++P L
Sbjct: 795 APMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTL 835


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 229/471 (48%), Gaps = 44/471 (9%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALT----IQKRFNSIHSIMSQVEENGMDPDSIF 144
           ++A  I   +   G  P++VTY+T +  L     ++   + + S++S    NG+  +   
Sbjct: 272 RQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISA---NGL-VNVYC 327

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +NA+I+   + G ++EA+    +MK  G++P   TY+ LI G+   G  E+ + L++ M 
Sbjct: 328 YNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEM- 386

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           +  N++P+L +Y+ L    C ++    + ++   + A+G K D   Y+ +   +   G+ 
Sbjct: 387 KYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDL 446

Query: 265 DQAEEVIVEMEHN-----------------------------------GVQPNGRTCGII 289
           D A +++ EM  N                                   G+ P+  TC +I
Sbjct: 447 DSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVI 506

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           I  +C+EG+++EAL     M+  G+ PNL  +N +I    +    +   E+  LM +  V
Sbjct: 507 IDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNV 566

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            P V+ YST+++ ++      K   ++  M K G+ PD  AY+IL           +A  
Sbjct: 567 LPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYN 626

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L   M E+G  P+ + +T++I+G+C  G M +A  +F++M + G  P + T+ +L+ GY 
Sbjct: 627 LFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYC 686

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  +   A+ ++  MK  G+ P   T+ +L  A R  G   +A  +L+++K
Sbjct: 687 KMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMK 737



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 180/395 (45%), Gaps = 42/395 (10%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           I F+ +I  F+ +  +E A+D F + K++GL  +T + N L+K    A + E    L + 
Sbjct: 180 IVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFEE 239

Query: 203 MSREGNVKPNLRTYNVLVRAWCN------EKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           M   G   PN+ TY +++  +C       + +  +A  ++ +M  +G  P VVTY+T   
Sbjct: 240 MKSTGP-PPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIY 298

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              + G  + A + +  +       N      II G CK+G++ EAL+    MK  G+ P
Sbjct: 299 GLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISP 358

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++  +++LI GF +  D +    ++  MK   + P +++YS++ +        D   +IF
Sbjct: 359 DVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIF 418

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI--------------------- 415
            D+G AG K D  AYSIL KG+  + + + A +L+  M+                     
Sbjct: 419 RDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKM 478

Query: 416 --------------ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
                         E G  P++     II   C +G ++ A+ + ++M   G+ PNL T+
Sbjct: 479 GLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTY 538

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             ++    + R+  RA E+  +M    V P    +
Sbjct: 539 NAVINRLCKERKSERALELFPLMLKRNVLPSVVVY 573



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 63/110 (57%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T ++      G  ++A A+FN +++ GH P++VTYT+L+       R +    ++ ++
Sbjct: 642 SYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEM 701

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +  G+ PD + +N +I A    GN+++A++   +MKE+G+ P   TY  L
Sbjct: 702 KRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTYMML 751



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/184 (25%), Positives = 84/184 (45%), Gaps = 36/184 (19%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V   + L++   ++   Q+A  ++  +++ G  P +V YT L+  L  + R    +++ 
Sbjct: 569 SVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLF 628

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEA----------------------MDTFWKM 168
            ++ ENGM PD I + +VI  F   G+M +A                      +D + KM
Sbjct: 629 KKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKM 688

Query: 169 -------------KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
                        K  G+TP   TYN LI  +   G  ++++++L+ M +E  V P+  T
Sbjct: 689 NRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEM-KENGVLPDHMT 747

Query: 216 YNVL 219
           Y +L
Sbjct: 748 YMML 751



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 52/267 (19%), Positives = 108/267 (40%), Gaps = 69/267 (25%)

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEF-----RVNP 351
           ++   ++F+ TMK+YG   ++  F    +  V ++   G+  EV AL+++      +VN 
Sbjct: 104 EVARHIKFSTTMKKYGFSRSIDAF----RTVVNVLALAGMHMEVYALLRDIVCYYNKVNL 159

Query: 352 D------------------VITYSTIMNAWS-------------------------TAGF 368
           D                  VI +  ++  ++                         +  F
Sbjct: 160 DAFELFPILLESPKDAARSVIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNF 219

Query: 369 MDKC----------KEIFDDMGKAGIKPDAHAYSILAKGYVR------EQEPEKAEELLM 412
           + KC          + +F++M   G  P+   Y+I+   Y +      + +  +A E+L 
Sbjct: 220 LLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILE 279

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M  +G  P VV ++T I G C  G ++ A++    +       N+  +  ++ G  +  
Sbjct: 280 EMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKG 339

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLL 499
           +   A ++L+ MK+ G+ P   T+ +L
Sbjct: 340 ELDEALKVLEEMKSCGISPDVYTYSIL 366


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 222/456 (48%), Gaps = 8/456 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH--KPSLVTYTTLLAALTIQKRFNSIHSI 129
           V S + L+ SL ++GK  +A  +   + EGG    P++V Y T++     +   N    +
Sbjct: 182 VFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDL 241

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ + G+ PD + +N+V++A  ++  M++A     +M    + P   TYN LI GY  
Sbjct: 242 FKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSS 301

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+ +E+V++   M R  ++ P++ T ++L+ + C    I EA +V   MA  G  PDV 
Sbjct: 302 TGQWKEAVRVFKEMRRH-SILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 360

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +YN +   YA  G      ++   M  +G+ P+  T  ++I  Y   G + +A+     M
Sbjct: 361 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +++GV P++V +  +I     I   D   E    M +  V PD   Y+ ++  + T G +
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 480

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            K KE+  ++   G+  D   +S +     +      A+ +    +  G HP+ V+++ +
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSML 540

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+C  G M++A+ VFD M   G+ PN+  + TL+ GY +  +      + + M   G+
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGI 600

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
            P    + ++ +     GL +  + + +K+K  E T
Sbjct: 601 KPSTILYSIIID-----GLFQAGRTVPAKVKFHEMT 631



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 214/473 (45%), Gaps = 39/473 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSIMSQVEEN 136
           LM+      +P+ A A F  L+  G + +++    LL      KR + ++  ++ +  E 
Sbjct: 117 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPEL 176

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG--LTPTTSTYNTLIKGYGIAGKPE 194
           G  PD   ++ ++ +  + G   +A D    M E G   +P    YNT+I G+   G   
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 236

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++  L   M + G + P+L TYN +V A C  + + +A   + +M    + P+  TYN +
Sbjct: 237 KACDLFKEMVQRG-IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 295

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              Y+  G+  +A  V  EM  + + P+  T  +++   CK GKIKEA     TM   G 
Sbjct: 296 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 355

Query: 315 HPNLVIFNLLIKGFV------------EIMDRDGV--------------------DEVLA 342
           +P++  +N+++ G+             ++M  DG+                    D+ + 
Sbjct: 356 NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 415

Query: 343 LMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +  E R   V PDV+TY T++ A    G MD   E F+ M   G+ PD +AY+ L +G+ 
Sbjct: 416 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 475

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
                 KA+EL+  ++ +G H ++V F++II+  C  G +  A  +FD     G+ P+  
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 535

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            +  LM GY    +  +A  +   M + G+ P    +  L       G   E 
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 588



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/483 (24%), Positives = 219/483 (45%), Gaps = 36/483 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT------------- 118
           V +   +++   + G   +A  +F  +++ G  P LVTY +++ AL              
Sbjct: 219 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLR 278

Query: 119 --IQKRF--------NSIHS------------IMSQVEENGMDPDSIFFNAVINAFSESG 156
             + KR         N I+             +  ++  + + PD +  + ++ +  + G
Sbjct: 279 QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 338

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            ++EA D F  M   G  P   +YN ++ GY   G   +   L DLM  +G + P+  T+
Sbjct: 339 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG-IAPDFYTF 397

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           NVL++A+ N   + +A  + ++M   G+KPDVVTY T+  A  + G+ D A E   +M  
Sbjct: 398 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 457

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            GV P+      +I G+C  G + +A      +   G+H ++V F+ +I    ++     
Sbjct: 458 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 517

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              +  L     ++PD + YS +M+ +   G M+K   +FD M  AGI+P+   Y  L  
Sbjct: 518 AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVN 577

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           GY +    ++   L   M++ G  P+ ++++ II G    G    A   F +M E G++ 
Sbjct: 578 GYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAM 637

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           ++ T+  ++ G  + R    A  + + ++A  V     T   + +    T   +EAK + 
Sbjct: 638 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 697

Query: 517 SKI 519
           + I
Sbjct: 698 ASI 700



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 208/436 (47%), Gaps = 1/436 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+ +EA  +F  +      P +VT + L+ +L    +      +   +   G +PD   +
Sbjct: 303 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 362

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++N ++  G + +  D F  M   G+ P   T+N LIK Y   G  ++++ + + M R
Sbjct: 363 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM-R 421

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +  VKP++ TY  ++ A C    + +A    ++M   G+ PD   YN +   +  +G   
Sbjct: 422 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 481

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A+E+I E+ +NG+  +      II+  CK G++ +A          G+HP+ V++++L+
Sbjct: 482 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 541

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G+  +   +    V   M    + P+V+ Y T++N +   G +D+   +F +M + GIK
Sbjct: 542 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 601

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P    YSI+  G  +      A+     M ESG   ++  +  ++ G   +   D AI +
Sbjct: 602 PSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL 661

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F ++    V  N+ T  T++ G  + R+   A+++   +    + P   T+ ++      
Sbjct: 662 FKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIK 721

Query: 506 TGLTKEAKRILSKIKN 521
            GL +EA+ + S ++N
Sbjct: 722 EGLVEEAEDMFSSMQN 737



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 210/423 (49%), Gaps = 7/423 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +++ LM SL + GK +EA+ +F+ +   G  P + +Y  +L     +     +  +  
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 383

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G+ PD   FN +I A++  G +++AM  F +M++ G+ P   TY T+I      G
Sbjct: 384 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +++++  + M  +G V P+   YN L++ +C   ++ +A  ++ ++  +GM  D+V +
Sbjct: 444 KMDDAMEKFNQMIDQG-VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 502

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           ++I     + G    A+ +     + G+ P+     +++ GYC  GK+++ALR    M  
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            G+ PN+V++  L+ G+ +I     +DE L+L +E     + P  I YS I++    AG 
Sbjct: 563 AGIEPNVVVYCTLVNGYCKI---GRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 619

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
               K  F +M ++GI  D   Y+I+ +G  + +  ++A  L   +       N++   T
Sbjct: 620 TVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G      ++ A ++F  +    + P++ T+  ++    +      AE++   M+  G
Sbjct: 680 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 489 VHP 491
             P
Sbjct: 740 CEP 742



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 198/444 (44%), Gaps = 42/444 (9%)

Query: 85  RGKPQEAQAIFNNLIEGGHKPSLV-----TYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           R  P  A A+FN        P ++     TY  L+   T   R     +   Q+   G+ 
Sbjct: 84  RSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLR 143

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            + I  N ++  F E+   +EA+D    +  E G  P   +Y+ L+K     GK  ++  
Sbjct: 144 VNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 203

Query: 199 LLDLMSREGNV-KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           LL +M+  G V  PN+  YN ++  +  E ++ +A ++  +M   G+ PD+VTYN++  A
Sbjct: 204 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 263

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+AE  + +M +  V PN  T   +I GY   G+ KEA+R  + M+ + + P 
Sbjct: 264 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP- 322

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
                                             DV+T S +M +    G + + +++FD
Sbjct: 323 ----------------------------------DVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G  PD  +Y+I+  GY  +       +L   M+  G  P+   F  +I  + + G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 408

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D+A+ +F++M +HGV P++ T+ T++       +   A E    M   GV P K  + 
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 468

Query: 498 LLAEARRATGLTKEAKRILSKIKN 521
            L +     G   +AK ++S+I N
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMN 492



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 180/373 (48%), Gaps = 7/373 (1%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   +A  IFN + + G KP +VTY T++AAL    + +      +Q+ + G+ PD   +
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +I  F   G++ +A +   ++  +G+      ++++I      G+  ++  + DL   
Sbjct: 468 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G + P+   Y++L+  +C    + +A  V   M ++G++P+VV Y T+   Y + G  D
Sbjct: 528 VG-LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRID 586

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +   +  EM   G++P+     III G  + G+   A      M E G+  ++  +N+++
Sbjct: 587 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVL 646

Query: 326 KGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +G  +       DE + L KE R   V  ++IT +T+++       +++ K++F  + ++
Sbjct: 647 RGLFK---NRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 703

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
            + P    YSI+    ++E   E+AE++  +M  +G  PN  +   ++        + RA
Sbjct: 704 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 763

Query: 443 IEVFDKMCEHGVS 455
                K+ E   S
Sbjct: 764 GAYLSKIDERNFS 776



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 126/251 (50%), Gaps = 1/251 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + ++N+L + G+  +AQ IF+  +  G  P  V Y+ L+    +  +      +   +  
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++P+ + +  ++N + + G ++E +  F +M + G+ P+T  Y+ +I G   AG+   
Sbjct: 563 AGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVP 622

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +      M+  G +  ++ TYN+++R     +   EA  +  ++ A  +K +++T NT+ 
Sbjct: 623 AKVKFHEMTESG-IAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 681

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               Q    ++A+++   +  + + P+  T  I+I+   KEG ++EA     +M+  G  
Sbjct: 682 DGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741

Query: 316 PNLVIFNLLIK 326
           PN  + N +++
Sbjct: 742 PNSRLLNHVVR 752



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 3/247 (1%)

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD-GV 337
           + P   T  I++    +  + + AL F   +   G+  N++I N L++GF E    D  +
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 166

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG--IKPDAHAYSILA 395
           D +L    E    PDV +YS ++ +    G   +  ++   M + G    P+  AY+ + 
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 226

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G+ +E +  KA +L   M++ G  P++V + +++   C   +MD+A     +M    V 
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 286

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           PN  T+  L++GYS   Q   A  + + M+   + P   T  +L  +    G  KEA+ +
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 516 LSKIKNK 522
              +  K
Sbjct: 347 FDTMAMK 353


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 115/428 (26%), Positives = 212/428 (49%), Gaps = 3/428 (0%)

Query: 90  EAQAIFNNLIE-GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           +A + FN+++    H P +  +  +L++L     F    S   Q+E  G+ P+   FN +
Sbjct: 35  DAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNIL 94

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           IN FS    +  A     K+ + G  P T T NTL++G  + GK +E++   D + R+  
Sbjct: 95  INCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRK-R 153

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM-KPDVVTYNTIATAYAQNGEADQA 267
              +  +Y  L+   C       A  ++ K+    + +PDV+ Y  I  ++ ++     A
Sbjct: 154 FHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDA 213

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
            ++  EM    + PN  T   +I G+C  G++KEA+     M    V+PN+  FN+LI G
Sbjct: 214 YDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDG 273

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             +  +      VL++M +  V P+V+TY+++M+ +     ++K K +F+ +   G+ P+
Sbjct: 274 LCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPN 333

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
            H+YS++  G  + +  ++A +L   M      PN V ++++I G C  G +    ++ D
Sbjct: 334 VHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLID 393

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           ++   G   N+ T+ +L+ G  +  Q  +A  +L  MK  G+ P  ST+  L +     G
Sbjct: 394 EINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNG 453

Query: 508 LTKEAKRI 515
             K+A+RI
Sbjct: 454 RLKDAQRI 461



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 217/419 (51%), Gaps = 12/419 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+  L   GK +EA    +++I        V+Y TL+  L       +   ++ ++
Sbjct: 125 TVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKI 184

Query: 134 EENGM---DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           E  G+    PD I + A+I++F +   + +A D + +M    + P   T+N+LI G+ I 
Sbjct: 185 E--GLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIV 242

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ +E+V LL+ MS   NV PN+ T+N+L+   C E  + +A +V+  M   G++P+VVT
Sbjct: 243 GQLKEAVGLLNEMSL-NNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVT 301

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y ++   Y    E ++A+ V   +   GV PN  +  ++I+G CK   + EA++  + M 
Sbjct: 302 YTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMH 361

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF--RVNP-DVITYSTIMNAWSTAG 367
              + PN V ++ LI G  +      + +V  L+ E   R  P ++ITY++++N      
Sbjct: 362 LKNMTPNTVTYSSLIDGLCK---SGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNH 418

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +DK   +   M   GI+PD   Y+ L  G  +    + A+ +   ++  G+  N+ ++T
Sbjct: 419 QVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYT 478

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            +I+G C +G  D A+ +  +M ++G  P+  T+ETL+    +  +  +A ++L+ M A
Sbjct: 479 VMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIA 537



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/333 (22%), Positives = 156/333 (46%), Gaps = 1/333 (0%)

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +++V   + +    N  P +  +N ++ +     +   A +   +M   G++P++ T+N 
Sbjct: 34  DDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFNI 93

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   ++   + + A  ++ ++   G QP+  T   ++ G C  GK+KEAL F   +    
Sbjct: 94  LINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRKR 153

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE-FRVNPDVITYSTIMNAWSTAGFMDKC 372
            H + V +  LI G  +  +     ++L  ++    V PDVI Y+ I++++     +   
Sbjct: 154 FHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDA 213

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            +++ +M    I P+   ++ L  G+    + ++A  LL  M  +  +PNV  F  +I G
Sbjct: 214 YDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDG 273

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C +G + +A  V   M + GV PN+ T+ +LM GY   ++  +A+ +   +   GV P 
Sbjct: 274 LCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPN 333

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
             ++ ++        +  EA ++  ++  K  T
Sbjct: 334 VHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMT 366



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 54/204 (26%), Positives = 108/204 (52%), Gaps = 3/204 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + ++N L +     EA  +F  +      P+ VTY++L+  L    R + +  ++ 
Sbjct: 334 VHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLID 393

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G   + I +N+++N   ++  +++A+    KMK+ G+ P  STY TL+ G    G
Sbjct: 394 EINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNG 453

Query: 192 KPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           + +++ ++  DL+ +      N+R Y V++   C E    EA +++ +M  +G  PD VT
Sbjct: 454 RLKDAQRIYQDLLCK--GYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVT 511

Query: 251 YNTIATAYAQNGEADQAEEVIVEM 274
           Y T+ +A  +N +  +A +++ EM
Sbjct: 512 YETLISALFKNNKNGKAVKLLREM 535



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/273 (22%), Positives = 122/273 (44%), Gaps = 36/273 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L + G+ ++A ++ + +I+ G +P++VTYT+L+    + K  N    + +
Sbjct: 264 VYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFN 323

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY----------- 180
            +   G+ P+   ++ +IN   ++  ++EA+  F +M    +TP T TY           
Sbjct: 324 TISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSG 383

Query: 181 ------------------------NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
                                   N+L+ G     + ++++ LL  M  EG ++P++ TY
Sbjct: 384 RISDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEG-IQPDMSTY 442

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
             LV   C    + +A  +   +   G   ++  Y  +     + G  D+A  ++ +ME 
Sbjct: 443 TTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMED 502

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           NG  P+  T   +IS   K  K  +A++  R M
Sbjct: 503 NGCMPDAVTYETLISALFKNNKNGKAVKLLREM 535



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 36/132 (27%), Positives = 64/132 (48%), Gaps = 1/132 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L +  +  +A A+   + + G +P + TYTTL+  L    R      I   +   G
Sbjct: 410 LLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKG 469

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              +   +  +IN   + G  +EA+    +M+++G  P   TY TLI       K  ++V
Sbjct: 470 YPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAV 529

Query: 198 KLL-DLMSREGN 208
           KLL ++++RE +
Sbjct: 530 KLLREMIARESD 541


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 214/425 (50%), Gaps = 1/425 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++   + G   +A  +F  +++ G  P LVTY++++ AL   +      + + 
Sbjct: 223 VVAYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLR 282

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+   G+ PD+  +N +I  +S +G  +EA+  F +M+   + P   T N L+      G
Sbjct: 283 QMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYG 342

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E+  + D M+ +G   P++ +Y +++  +  +  + +  ++   M   G+ PD+ T+
Sbjct: 343 KIKEARDVFDTMAMKGQ-NPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTF 401

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  AYA  G  D+A  +  EM  +GV+P+  T   +I+  C+ GK+ +A+     M +
Sbjct: 402 SVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMID 461

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P+   ++ LI+GF          E++  +    +  D++ +S+I+N     G +  
Sbjct: 462 QGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMD 521

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            + IFD     G  PDA  YS+L  GY    + EKA  +   M+ +G  PNVV++ T+++
Sbjct: 522 AQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVN 581

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C  G +D  + +F +M + G+ P+   +  ++ G   A +   A+     M   G+  
Sbjct: 582 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVKFHEMTESGIAI 641

Query: 492 QKSTF 496
            K T+
Sbjct: 642 NKCTY 646



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 214/444 (48%), Gaps = 3/444 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH--KPSLVTYTTLLAALTIQKRFNSIHSI 129
           V S + L+ SL ++GK  +A  +   + EGG    P +V YTT++     +   N    +
Sbjct: 186 VFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDL 245

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ + G+ PD + +++V++A  ++  M +A     +M   G+ P   TYN LI GY  
Sbjct: 246 FKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSS 305

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+ +E+V++   M R  ++ P++ T N+L+ + C    I EA +V   MA  G  PDV 
Sbjct: 306 TGQWKEAVRVFKEMRRH-SILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 364

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +Y  +   YA  G      ++   M  +G+ P+  T  ++I  Y   G + +A+     M
Sbjct: 365 SYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEM 424

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +++GV P++V +  +I     I   D   E    M +  V PD   Y  ++  + T G +
Sbjct: 425 RDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 484

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            K KE+  ++   G++ D   +S +     +      A+ +    +  G HP+ V+++ +
Sbjct: 485 LKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSML 544

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+C  G M++A+ VFD M   G+ PN+  + TL+ GY +  +      + + M   G+
Sbjct: 545 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 604

Query: 490 HPQKSTFLLLAEARRATGLTKEAK 513
            P    + ++ +     G T  AK
Sbjct: 605 KPSTILYNIIIDGLFVAGRTVPAK 628



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 199/392 (50%), Gaps = 7/392 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++  LM SL + GK +EA+ +F+ +   G  P + +Y  +L     +     +  +  
Sbjct: 328 VVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFD 387

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G+ PD   F+ +I A++  G +++AM  F +M++ G+ P   TY T+I      G
Sbjct: 388 LMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIG 447

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +++++  + M  +G V P+   Y+ L++ +C   ++ +A  ++ ++  +GM+ D+V +
Sbjct: 448 KMDDAMEKFNQMIDQG-VAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFF 506

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           ++I     + G    A+ +     + G  P+     +++ GYC  GK+++ALR    M  
Sbjct: 507 SSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 566

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            G+ PN+V++  L+ G+ +I     +DE L+L +E     + P  I Y+ I++    AG 
Sbjct: 567 AGIEPNVVVYGTLVNGYCKI---GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGR 623

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
               K  F +M ++GI  +   Y+I+ +G+ + +  ++A  L   +       +++   T
Sbjct: 624 TVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNT 683

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
           +I+G      ++ A ++F  +   G+ P + T
Sbjct: 684 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVT 715



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 187/385 (48%), Gaps = 38/385 (9%)

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P S  +  +++  + +   E A+  F ++  +GL       N L+KG+  A + +E++
Sbjct: 111 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEAL 170

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCN-------------------------------- 225
            +L   + E    P++ +Y++L+++ C+                                
Sbjct: 171 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVI 230

Query: 226 -----EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
                E ++ +A ++  +M   G+ PD+VTY+++  A  +     +AE  + +M + GV 
Sbjct: 231 DCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVL 290

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+  T   +I GY   G+ KEA+R  + M+ + + P++V  N+L+    +        +V
Sbjct: 291 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDV 350

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
              M     NPDV +Y  ++N ++T G +    ++FD M   GI PD + +S+L K Y  
Sbjct: 351 FDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYAN 410

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
               +KA  +   M + G  P+VV +TT+I+  C  G MD A+E F++M + GV+P+   
Sbjct: 411 CGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 470

Query: 461 FETLMWGYSEARQPWRAEE-ILQIM 484
           +  L+ G+       +A+E IL+IM
Sbjct: 471 YHCLIQGFCTHGSLLKAKELILEIM 495



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 24/110 (21%), Positives = 53/110 (48%), Gaps = 1/110 (0%)

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
           G   + P +H Y+IL     R   PE A      ++ +G   +++I   ++ G+C     
Sbjct: 107 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRT 166

Query: 440 DRAIEV-FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           D A+++   +  E G  P++ ++  L+    +  +  +A+++L++M   G
Sbjct: 167 DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGG 216


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 223/450 (49%), Gaps = 47/450 (10%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T L++SL + GK +EA+ +  +       PS+  Y  L+  +  +  F     ++ ++
Sbjct: 218 SYTTLISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEM 272

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+DP+ I +  +INA S++GN+E ++    KM   G +P   T+ +LIKG+ + G  
Sbjct: 273 MNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGS 332

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E++   D M REG V PN+  YN L+   C+++++ +A +V ++M  +G  P+V TY+ 
Sbjct: 333 HEALDFWDRMIREG-VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSA 391

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   YA+ G+ D A EV   M  +G  PN      ++   C+     +A      M+   
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451

Query: 314 VHPNLVIFNLLIKGF---------VEIMDRDG----------VDEVL-ALMKEFR----- 348
             PN V FN  IKG          +++ D+ G           +E+L +L+K+ R     
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511

Query: 349 ----------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
                     +  +++TY+TI+  +  AG + +  E+   M   G KPDA   +I+   Y
Sbjct: 512 GLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            ++ +   A +L+  +    +HP+++ +T++ISG C+   ++ AI    +M   G+SPN+
Sbjct: 572 CKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNV 631

Query: 459 KTFETLM------WGYSEARQPWRAEEILQ 482
            T+  L+       G+S A Q   A  I+Q
Sbjct: 632 ATWNVLVRHLFSNMGHSGAVQFLDASSIMQ 661



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 211/437 (48%), Gaps = 12/437 (2%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G  ++A   F  + +   KP++  Y  +L AL  + RF  I+ I S ++++GM+P+   +
Sbjct: 125 GSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTY 184

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++ A  ++  ++ A     +M   G  P   +Y TLI      GK +E+ +L      
Sbjct: 185 NILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL------ 238

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
             +  P++  YN L+   C E    EA+ ++ +M   G+ P+V++Y TI  A +  G  +
Sbjct: 239 AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVE 298

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            +  V+ +M   G  PN  T   +I G+  +G   EAL F   M   GV PN+V +N L+
Sbjct: 299 LSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALM 358

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            G   +  +  + + +++  +  +N   P+V TYS +++ ++ AG +D   E+++ M   
Sbjct: 359 HG---LCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITH 415

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G  P+  AY+ +     R     +A  L+  M      PN V F T I G C  G +D A
Sbjct: 416 GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWA 475

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           I+VFD+M   G  PN  T+  L+    + R+   A  +++ M+  G+     T+  +   
Sbjct: 476 IKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYG 535

Query: 503 RRATGLTKEAKRILSKI 519
               G+  EA  +L K+
Sbjct: 536 YCCAGMLGEALELLGKM 552



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 207/455 (45%), Gaps = 39/455 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV+    ++++L++  + Q    I++N+ + G +P++ TY  LL AL    R +  H ++
Sbjct: 145 TVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLL 204

Query: 131 SQVEENGMDPDSI------------------------------FFNAVINAFSESGNMEE 160
            ++   G DPD +                               +NA+IN   +    EE
Sbjct: 205 VEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEE 264

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A     +M   G+ P   +Y T+I     AG  E S+ +L  M   G   PNL T+  L+
Sbjct: 265 AFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG-CSPNLHTFTSLI 323

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           + +  +    EA +   +M   G+ P+VV YN +            A  V  +ME NG  
Sbjct: 324 KGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCC 383

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV-DE 339
           PN RT   +I GY K G +  A      M  +G HPN+V +  +    V+++ R+ + ++
Sbjct: 384 PNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM----VDVLCRNSMFNQ 439

Query: 340 VLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              L++  +V    P+ +T++T +     +G +D   ++FD MG +G  P+   Y+ L  
Sbjct: 440 AYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLD 499

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
             ++++   +A  L+  M   G   N+V + TII G+C  G +  A+E+  KM   G  P
Sbjct: 500 SLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKP 559

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           +  T   ++  Y +  +   A +++  + A   HP
Sbjct: 560 DAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHP 594



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 184/376 (48%), Gaps = 6/376 (1%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +  +I   +    M+       +MK  G++ +   + ++I  Y  AG  E+++K    M 
Sbjct: 79  YQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM- 137

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           ++  VKP ++ YN ++ A  +E        +   M   GM+P+V TYN +  A  +N   
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           D A +++VEM   G  P+  +   +IS  CK GK+KEA   A +       P++ ++N L
Sbjct: 198 DGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT-----PSVPVYNAL 252

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G  +    +   ++L  M    ++P+VI+Y+TI+NA S AG ++    +   M   G 
Sbjct: 253 INGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGC 312

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+ H ++ L KG+  +    +A +    MI  G  PNVV +  ++ G CS  S+  A+ 
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVS 372

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           VF++M  +G  PN++T+  L+ GY++A     A E+   M   G HP    +  + +   
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLC 432

Query: 505 ATGLTKEAKRILSKIK 520
              +  +A  ++  ++
Sbjct: 433 RNSMFNQAYCLIENMQ 448



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/366 (24%), Positives = 170/366 (46%), Gaps = 54/366 (14%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T L+     +G   EA   ++ +I  G  P++V Y  L+  L  ++      S+ +
Sbjct: 316 LHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFN 375

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF-W------------------------ 166
           Q+E NG  P+   ++A+I+ ++++G+++ A + + W                        
Sbjct: 376 QMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNS 435

Query: 167 ----------KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
                      M+     P T T+NT IKG   +G+ + ++K+ D M   G   PN  TY
Sbjct: 436 MFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCF-PNTTTY 494

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N L+ +   ++   EA+ ++  M   G++ ++VTYNTI   Y   G   +A E++ +M  
Sbjct: 495 NELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVV 554

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G +P+  T  I+I  YCK+GK+  A++    +     HP+++ +  LI G   I    G
Sbjct: 555 RGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISG---ICTHIG 611

Query: 337 VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
           V+E +  ++      ++P+V T++ ++            + +F +MG +G      A SI
Sbjct: 612 VEEAIVYLRRMLSEGISPNVATWNVLV------------RHLFSNMGHSGAVQFLDASSI 659

Query: 394 LAKGYV 399
           +   +V
Sbjct: 660 MQPKFV 665



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 1/273 (0%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C  VR+ + L++   + G    A  ++N +I  G  P++V YT ++  L     FN  + 
Sbjct: 383 CPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYC 442

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++  ++     P+++ FN  I     SG ++ A+  F +M  SG  P T+TYN L+    
Sbjct: 443 LIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLL 502

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
              +  E+  L+  M   G ++ NL TYN ++  +C    + EA  ++ KM   G KPD 
Sbjct: 503 KDRRFGEAFGLVKDMEHRG-IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDA 561

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           +T N +  AY + G+ + A +++  +      P+      +ISG C    ++EA+ + R 
Sbjct: 562 ITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRR 621

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           M   G+ PN+  +N+L++     M   G  + L
Sbjct: 622 MLSEGISPNVATWNVLVRHLFSNMGHSGAVQFL 654


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 109/452 (24%), Positives = 233/452 (51%), Gaps = 3/452 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + ++N     G+  +   +F  +++ G  P +VTYTT++  L   + F+   ++  
Sbjct: 203 VVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQ 262

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ +NG+ P+   +N +I+ +   G  +E +    +M   G  P   TY +L+      G
Sbjct: 263 QMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNG 322

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+    D M  +G +KP++ TY +++  +  +  ++E  ++++ M A+G+ P+   +
Sbjct: 323 RCREARFFFDSMIGKG-IKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIF 381

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRFARTMK 310
           N   +AYA+ G  D+A ++  +M   G+ P+  + G +I   CK G++ +A ++F + + 
Sbjct: 382 NIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMIN 441

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E GV P++V+F+ L+ G   +   + V+E+   M    ++P+++ ++TI+      G + 
Sbjct: 442 E-GVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVM 500

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + + + D +   G++PD  +Y+ L  G+      ++A +LL  M+  G  P+   + T++
Sbjct: 501 EGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLL 560

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+C  G +D A   F KM  +G++P + T+ T++ G  + ++   A+E+   M   G  
Sbjct: 561 HGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTK 620

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
               T+ ++      +    EA ++   + +K
Sbjct: 621 WDIYTYNIILNGLCKSNCVDEAIKMFQNLCSK 652



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 205/426 (48%), Gaps = 5/426 (1%)

Query: 75  MTKLMNSLIERGKPQEA-QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + +L+N L +  +  EA   +   + E G  P  V+Y  LL  L  +KR      ++  +
Sbjct: 132 INQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMM 191

Query: 134 EENGM---DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ +    P+ + ++ VIN F   G +++  + F +M + G+ P   TY T+I G   A
Sbjct: 192 ADDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKA 251

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              + +  +   M   G VKPN+ TYN L+  + +     E   ++ +M+A G KP+  T
Sbjct: 252 QLFDRAEAVFQQMIDNG-VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCT 310

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y ++     +NG   +A      M   G++P+  T GI++ GY  +G + E       M 
Sbjct: 311 YGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMV 370

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ PN  IFN+    + +    D   ++   M++  ++PD ++Y  +++A    G +D
Sbjct: 371 ANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVD 430

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             +  F+ M   G+ PD   +S L  G     + EK EEL   M+  G HPN+V F TI+
Sbjct: 431 DAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTIL 490

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C +G +     + D +   GV P++ ++ TL+ G+  A     A ++L+ M + G+ 
Sbjct: 491 CNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLK 550

Query: 491 PQKSTF 496
           P   ++
Sbjct: 551 PDSFSY 556



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 137/567 (24%), Positives = 249/567 (43%), Gaps = 58/567 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++ L +      A+A+F  +I+ G KP++ TY  L+       ++  +  ++ 
Sbjct: 238 VVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLE 297

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  P+   + +++N   ++G   EA   F  M   G+ P+ +TY  ++ GY   G
Sbjct: 298 EMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKG 357

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E   LL+LM   G + PN   +N+   A+     I +A ++ +KM   G+ PD V+Y
Sbjct: 358 ALSEMHDLLNLMVANG-ISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSY 416

Query: 252 NTIATAYAQNGEADQAE-----------------------------------EVIVEMEH 276
             +  A  + G  D AE                                   E+  EM +
Sbjct: 417 GALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLN 476

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G+ PN      I+   CKEG++ E  R   +++  GV P+++ +N LI G       D 
Sbjct: 477 VGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDE 536

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             ++L  M    + PD  +Y+T+++ +  AG +D     F  M   GI P    Y+ +  
Sbjct: 537 ASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILH 596

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  + +   +A+EL + MI SG   ++  +  I++G C    +D AI++F  +C  G+  
Sbjct: 597 GLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQL 656

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N+ TF  ++    +  +   A ++   + A G+     T+ L+ E     G  +E   + 
Sbjct: 657 NIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLF 716

Query: 517 SKIK------NKERTN----EMEAEEDIPVESL------ERLYHKEATTASYPNLLQIPN 560
           S ++      N +  N     +    DI           ER +  EA+T S      + +
Sbjct: 717 SAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTS-----MLIS 771

Query: 561 VVSSDQ-KGSAAALKKGRMLLRDADSS 586
           + SSD+ +  A +L K   +L +A+SS
Sbjct: 772 IFSSDEYQHHAKSLPKKYRILNEANSS 798



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/444 (23%), Positives = 213/444 (47%), Gaps = 7/444 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSIMSQVEEN 136
           L+      G  +   A F  +++ G +   +    LL  L   KR   ++  ++ ++ E 
Sbjct: 100 LIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMDVLLQRMPEL 159

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL---TPTTSTYNTLIKGYGIAGKP 193
           G  PD++ +N ++         EEA++    M +  +    P   +Y+T+I G+   G+ 
Sbjct: 160 GCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQV 219

Query: 194 EESVKL-LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
           ++   L L++M R   + P++ TY  ++   C  +    A  V  +M  +G+KP++ TYN
Sbjct: 220 DKPYNLFLEMMDR--GIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYN 277

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +   Y   G+  +   ++ EM   G +PN  T G +++  CK G+ +EA  F  +M   
Sbjct: 278 CLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGK 337

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ P++  + +++ G+        + ++L LM    ++P+   ++   +A++  G +DK 
Sbjct: 338 GIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKA 397

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            +IF+ M + G+ PDA +Y  L     +    + AE     MI  G  P++V+F++++ G
Sbjct: 398 MDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYG 457

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C+    ++  E+F +M   G+ PN+  F T++    +  +    + ++  ++  GV P 
Sbjct: 458 LCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPD 517

Query: 493 KSTFLLLAEARRATGLTKEAKRIL 516
             ++  L +     G   EA ++L
Sbjct: 518 VISYNTLIDGHCLAGTIDEASKLL 541



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/452 (21%), Positives = 208/452 (46%), Gaps = 29/452 (6%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ +L + G+  E Q + +++   G +P +++Y TL+    +    +    ++  +   G
Sbjct: 489 ILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVG 548

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PDS  +N +++ + ++G ++ A   F KM  +G+TP   TYNT++ G     +  E+ 
Sbjct: 549 LKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAK 608

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L   M   G  K ++ TYN+++   C    + EA  +   + + G++ +++T+N +  A
Sbjct: 609 ELYLNMINSG-TKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGA 667

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G  + A ++   +  NG+  N  T  +++    +EG ++E       M++ G  PN
Sbjct: 668 LLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPN 727

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF--------- 368
             + N L++  +   D       L+ + E   + +  T S +++ +S+  +         
Sbjct: 728 SQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLPK 787

Query: 369 -------------------MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
                              +D    +F +M   G+ PD   Y+ +  G  +     +A+E
Sbjct: 788 KYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKE 847

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L ++MI S    N+  +  I++G C    +D A ++F  +C  G+  N+ TF  ++    
Sbjct: 848 LYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALL 907

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           +  +   A ++   + A G+ P   T+ L+AE
Sbjct: 908 KGGRKEDAMDLFAAIPANGLVPDVVTYRLVAE 939



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/335 (23%), Positives = 155/335 (46%), Gaps = 6/335 (1%)

Query: 194 EESVKLLDLMSREGNVK--PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           E  V L + M R+  +K  PN  TY++L+  +C   ++   +     +  +G + D +  
Sbjct: 73  ETVVSLFNRMVRDCYIKVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVI 132

Query: 252 NTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           N +           +A +V+++ M   G  P+  +  I++ G C E + +EAL     M 
Sbjct: 133 NQLLNGLCDGKRVGEAMDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMA 192

Query: 311 E---YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
           +   +   PN+V ++ +I GF      D    +   M +  + PDV+TY+T+++    A 
Sbjct: 193 DDQVWSCPPNVVSYSTVINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQ 252

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
             D+ + +F  M   G+KP+   Y+ L  GY+   + ++   +L  M   G  PN   + 
Sbjct: 253 LFDRAEAVFQQMIDNGVKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYG 312

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           ++++  C +G    A   FD M   G+ P++ T+  ++ GY+         ++L +M A 
Sbjct: 313 SLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVAN 372

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G+ P    F +   A    G+  +A  I +K++ +
Sbjct: 373 GISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQ 407



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/370 (22%), Positives = 164/370 (44%), Gaps = 29/370 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N L +     EA  +F NL   G + +++T+  ++ AL    R      + + +  NG
Sbjct: 629 ILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANG 688

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  + + +  V+    E G++EE    F  M+++G  P +   N L++     G    + 
Sbjct: 689 LVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAG 748

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAW------------------CNEKN----------I 229
             L  +  E N      T ++L+  +                   NE N          I
Sbjct: 749 AYLSKLD-ERNFSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRI 807

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
            +A+++  +M   G+ PDVVTYNTI     Q G   +A+E+ + M ++  Q N  T  II
Sbjct: 808 DDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNII 867

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           ++G CK   + EA +  +++   G+  N++ FN++I   ++   ++   ++ A +    +
Sbjct: 868 LNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGL 927

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            PDV+TY  +       G +++   +F  M K+G   D+   + L +  ++  +  +A  
Sbjct: 928 VPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGA 987

Query: 410 LLMTMIESGF 419
            L  + E  F
Sbjct: 988 YLSKLDEKNF 997



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/455 (22%), Positives = 199/455 (43%), Gaps = 20/455 (4%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L++   + G+   A + F  ++  G  P +VTY T+L  L   KRF+    +   +
Sbjct: 555 SYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNM 614

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G   D   +N ++N   +S  ++EA+  F  +   GL     T+N +I      G+ 
Sbjct: 615 INSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRK 674

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E+++ L   +   G V+ N+ TY ++V     E ++ E  ++   M  +G  P+    N 
Sbjct: 675 EDAMDLFAAIPANGLVQ-NVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNA 733

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-KEY 312
           +       G+  +A   + +++         T  ++IS +  +    E    A+++ K+Y
Sbjct: 734 LVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSD----EYQHHAKSLPKKY 789

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFM 369
            +  N    + LIK    I      D+  +L +E     + PDV+TY+TI++     G  
Sbjct: 790 RI-LNEANSSALIKKARRI------DDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRF 842

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            + KE++  M  +  + + + Y+I+  G  +    ++A ++  ++   G   N++ F  +
Sbjct: 843 SEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIM 902

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I      G  + A+++F  +  +G+ P++ T+  +     E       + +   M+  G 
Sbjct: 903 IGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGT 962

Query: 490 HPQKSTFLLLAEARRAT--GLTKEAKRILSKIKNK 522
            P  S  LL A  RR    G    A   LSK+  K
Sbjct: 963 -PLDSR-LLNALVRRLLQRGDISRAGAYLSKLDEK 995



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/326 (19%), Positives = 144/326 (44%), Gaps = 29/326 (8%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            ++ +LIE G  +E  ++F+ + + G  P+      L+  L  +   +   + +S+++E  
Sbjct: 699  VVENLIEEGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERN 758

Query: 138  MDPDSIFFNAVINAFS----------------------------ESGNMEEAMDTFWKMK 169
               ++   + +I+ FS                            ++  +++A   F +M 
Sbjct: 759  FSVEASTTSMLISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREML 818

Query: 170  ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
              GLTP   TYNT++ G    G+  E+ K L L       + N+ TYN+++   C    +
Sbjct: 819  MKGLTPDVVTYNTILHGLFQTGRFSEA-KELYLSMINSRTQMNIYTYNIILNGLCKSNCV 877

Query: 230  TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
             EA+ +   + + G++ +++T+N +  A  + G  + A ++   +  NG+ P+  T  ++
Sbjct: 878  DEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLV 937

Query: 290  ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
                 +EG ++E      TM++ G   +  + N L++  ++  D       L+ + E   
Sbjct: 938  AENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNF 997

Query: 350  NPDVITYSTIMNAWSTAGFMDKCKEI 375
            + +  T S +++ +S   +    K +
Sbjct: 998  SLEASTTSELISLFSRGEYQHHAKSL 1023



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 27/122 (22%), Positives = 56/122 (45%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +N  +   + +   ++N L +     EA  +F +L   G + +++T+  ++ AL    R 
Sbjct: 853 INSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRK 912

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                + + +  NG+ PD + +  V     E G++EE    F  M++SG    +   N L
Sbjct: 913 EDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNAL 972

Query: 184 IK 185
           ++
Sbjct: 973 VR 974


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 218/443 (49%), Gaps = 13/443 (2%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R+V +   +++ L + G  + A+++F  + E G  P +VTY +L+         +    I
Sbjct: 54  RSVFTYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICI 113

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             Q+++   DPD I +NA+IN F +   M +A +   +MK +GL P   TY+T I  +  
Sbjct: 114 FEQMKDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCK 173

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G  +E++K    M R   + PN  TY  L+ A C   N+ EA  ++ ++  +G+K +VV
Sbjct: 174 EGMLQEAIKFFVDMRRVA-LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVV 232

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +     + G   +AEEV   M + GV PN  T   ++ G+ K  +++ A    + M
Sbjct: 233 TYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEM 292

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           KE  + P+L+++  ++ G       +    ++  +KE  +N + + Y+T+M+A+  +G  
Sbjct: 293 KEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQA 352

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +   + ++M              L  G  +    E A++L   M++ G  P+ + +T +
Sbjct: 353 TEALTLLEEMLD------------LVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTAL 400

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G    G++  A+ + D+M E G+  +L  +  L+WG S + Q  +A  +L  M   GV
Sbjct: 401 IDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGV 460

Query: 490 HPQKSTFLLLAEARRATGLTKEA 512
            P +  ++ L +   A G   EA
Sbjct: 461 LPDEVVYMCLIKKYYALGKVDEA 483



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 91/363 (25%), Positives = 185/363 (50%), Gaps = 3/363 (0%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           +EEA + F KM++  + P   + N L+      G+ + S K    M   G +K ++ TYN
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAG-IKRSVFTYN 60

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +++   C E ++  A ++  +M  +G  PD+VTYN++   + + G  D+   +  +M+  
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV-EIMDRDG 336
              P+  T   +I+ +CK  ++ +A  F   MK  G+ PN+V ++  I  F  E M ++ 
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
           + +    M+   + P+  TY+++++A   AG + +  ++ +++ +AGIK +   Y+ L  
Sbjct: 181 I-KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLD 239

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G   E   ++AEE+   M+ +G  PN   +T ++ G+     M+ A ++  +M E  + P
Sbjct: 240 GLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKP 299

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +L  + T++WG     +   A+ ++  +K  G++     +  L +A   +G   EA  +L
Sbjct: 300 DLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLL 359

Query: 517 SKI 519
            ++
Sbjct: 360 EEM 362



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 153/319 (47%)

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
           L  R+  V P  R+ N L+           +      M A+G+K  V TYN +     + 
Sbjct: 10  LKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKE 69

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           G+ + A  +  +M+  G  P+  T   +I G+ K G + E +     MK+    P+++ +
Sbjct: 70  GDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITY 129

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N LI  F +        E L  MK   + P+V+TYST ++A+   G + +  + F DM +
Sbjct: 130 NALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRR 189

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
             + P+   Y+ L     +     +A +L+  ++++G   NVV +T ++ G C +G M  
Sbjct: 190 VALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKE 249

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A EVF  M   GV+PN +T+  L+ G+ +A++   A++IL+ MK   + P    +  +  
Sbjct: 250 AEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILW 309

Query: 502 ARRATGLTKEAKRILSKIK 520
                   +EAK ++ +IK
Sbjct: 310 GLCNESRLEEAKLLIGEIK 328



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 138/294 (46%)

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           + EA     KM    + P   + N +    ++ G  D + +   +M   G++ +  T  I
Sbjct: 2   LEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNI 61

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +I   CKEG ++ A      MKE G  P++V +N LI G  ++   D    +   MK+  
Sbjct: 62  MIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDAD 121

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
            +PDVITY+ ++N +     M K  E   +M   G+KP+   YS     + +E   ++A 
Sbjct: 122 CDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAI 181

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           +  + M      PN   +T++I   C  G++  A+++ +++ + G+  N+ T+  L+ G 
Sbjct: 182 KFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGL 241

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            E  +   AEE+ + M   GV P + T+  L          + AK IL ++K K
Sbjct: 242 CEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEK 295



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/270 (24%), Positives = 117/270 (43%), Gaps = 24/270 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++ L E G+ +EA+ +F  ++  G  P+  TYT L+      K       I+ 
Sbjct: 231 VVTYTALLDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILK 290

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++E  + PD + +  ++        +EEA     ++KESG+      Y TL+  Y  +G
Sbjct: 291 EMKEKCIKPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSG 350

Query: 192 KPEESV-----------------------KLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
           +  E++                       KL D M  +G + P+   Y  L+       N
Sbjct: 351 QATEALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKG-MMPDKIAYTALIDGNMKHGN 409

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           + EA N+  +M   GM+ D+  Y  +    + +G+  +A  ++ EM   GV P+      
Sbjct: 410 LQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMC 469

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNL 318
           +I  Y   GK+ EAL     M + G+   L
Sbjct: 470 LIKKYYALGKVDEALELQNEMAKRGMITGL 499



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/143 (24%), Positives = 70/143 (48%)

Query: 67  ESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           E+   +  M  L++ L +    + A+ +F+ +++ G  P  + YT L+            
Sbjct: 354 EALTLLEEMLDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEA 413

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
            ++  ++ E GM+ D   + A+I   S SG +++A +   +M   G+ P    Y  LIK 
Sbjct: 414 LNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKK 473

Query: 187 YGIAGKPEESVKLLDLMSREGNV 209
           Y   GK +E+++L + M++ G +
Sbjct: 474 YYALGKVDEALELQNEMAKRGMI 496


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 216/448 (48%), Gaps = 1/448 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + ++  ++N+  + G   EA    + + + G  P   TYT+L+         NS + + +
Sbjct: 214 IYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFN 273

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G   + + +  +I+   E+G ++E +  F KM+E    PT  TY  +I       
Sbjct: 274 MMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGND 333

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E + L + M RE + +PN+ TY V+V A C E+ + E+  ++++M   G+ P VVTY
Sbjct: 334 RNLEGMDLFNEM-RERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTY 392

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y + G  + A E++  ME N  +PN RT   +I G+ K   + +A+     M E
Sbjct: 393 NALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLE 452

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             + P+LV +N LI    +    D   ++L L+KE  + PD  TYS  ++    +  M++
Sbjct: 453 SKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEE 512

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++F+ + + GIK +   Y+ L  G+ +  + ++A  LL  M      PN   + ++I 
Sbjct: 513 ACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIY 572

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C +G +   + + + M + GV P + T+  L+           A  +   M +FG  P
Sbjct: 573 GVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKP 632

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
              T+         +G  KEA+ +++++
Sbjct: 633 DVYTYTAFIHTYCTSGNVKEAEGMMARM 660



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/427 (27%), Positives = 213/427 (49%), Gaps = 1/427 (0%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           NK   R   S T +++ L E G+  E  ++F  + E    P++ TYT ++ AL    R  
Sbjct: 277 NKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNL 336

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
               + +++ E   +P+   +  +++A  +   ++E+     +M E GL P+  TYN LI
Sbjct: 337 EGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALI 396

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           +GY   G+ E ++++L LM    N +PN RTYN L+  +   K++ +A  ++ KM  S +
Sbjct: 397 RGYCEEGRIEAALEILGLM-ESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKL 455

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P +VTYN++     + G  D A +++  ++ NG+ P+  T  + I   CK  +++EA  
Sbjct: 456 TPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACD 515

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
              ++KE G+  N V++  LI G  +    D    +L  M      P+  TY++++    
Sbjct: 516 LFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVC 575

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G + +   + ++M K G+KP    Y+IL +  +RE + + A  +   M+  G  P+V 
Sbjct: 576 KEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVY 635

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +T  I  +C+ G++  A  +  +M E GV P+  T+  L+  Y      + A  +L+ M
Sbjct: 636 TYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRM 695

Query: 485 KAFGVHP 491
              G  P
Sbjct: 696 LDAGCDP 702



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 222/450 (49%), Gaps = 3/450 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +VRS  +L+  L       E + ++  ++     P++ T  T++ A +        +  +
Sbjct: 178 SVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYV 237

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S++ + G+ PDS  + ++I  +  + ++  A   F  M   G      +Y T+I G   A
Sbjct: 238 SKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEA 297

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRA-WCNEKNITEAWNVMHKMAASGMKPDVV 249
           G+ +E + L   M RE +  P +RTY V++ A + N++N+ E  ++ ++M     +P+V 
Sbjct: 298 GRIDEGISLFKKM-REDDCYPTVRTYTVIIHALFGNDRNL-EGMDLFNEMRERSCEPNVH 355

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +  A  +  + D++  ++ EM   G+ P+  T   +I GYC+EG+I+ AL     M
Sbjct: 356 TYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLM 415

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +     PN   +N LI GF +         +L+ M E ++ P ++TY+++++    AG  
Sbjct: 416 ESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHF 475

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D   ++ D + + G+ PD   YS+      + +  E+A +L  ++ E G   N V++T +
Sbjct: 476 DSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTAL 535

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G C  G +D AI + ++M      PN  T+ +L++G  +  +      +++ M   GV
Sbjct: 536 IDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENMSKMGV 595

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            P  +T+ +L E     G    A R+ +++
Sbjct: 596 KPTVATYTILIEEMLREGDFDHANRVFNQM 625



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 189/368 (51%), Gaps = 2/368 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M + SC   V + T +++++ +  K  E++ I N ++E G  PS+VTY  L+     + R
Sbjct: 345 MRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGR 404

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
             +   I+  +E N   P+   +N +I  FS+  ++ +AM    KM ES LTP+  TYN+
Sbjct: 405 IEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNS 464

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI     AG  + + KLLDL+   G V P+  TY+V +   C  K + EA ++ + +   
Sbjct: 465 LIHVQCKAGHFDSAYKLLDLLKENGLV-PDQWTYSVFIDTLCKSKRMEEACDLFNSLKEK 523

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+K + V Y  +   + + G+ D+A  ++  M      PN  T   +I G CKEGK++E 
Sbjct: 524 GIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEG 583

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L     M + GV P +  + +LI+  +   D D  + V   M  F   PDV TY+  ++ 
Sbjct: 584 LSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHT 643

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           + T+G + + + +   M +AG+ PD+  Y++L   Y R      A  +L  M+++G  P+
Sbjct: 644 YCTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPS 703

Query: 423 VVIFTTII 430
             I+  +I
Sbjct: 704 HPIWNNLI 711



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/462 (20%), Positives = 196/462 (42%), Gaps = 27/462 (5%)

Query: 88  PQEAQAIFNNL--IEGGHKPSLVTYTTLLAALTIQKRF-----------------NSIHS 128
           P  A   FN+L  I+ G K ++ +++ LL  L     F                 + I  
Sbjct: 99  PNIALQFFNSLPLIKPGFKHTVKSHSFLLKILIPNNLFGVGEKIRISMIKACVSVDDIRF 158

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNM-------EEAMDTFWKMKESGLTPTTSTYN 181
           ++  + +   D + I F   + +++E   M       +E    + +M    + P   T N
Sbjct: 159 LLDFLRQMNRDDNDIKFKLSVRSYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLN 218

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           T++  Y   G   E+   +  + + G + P+  TY  L+  +C   ++  A+ V + M  
Sbjct: 219 TMVNAYSKMGNIVEANLYVSKIFQAG-LSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPN 277

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G + + V+Y TI     + G  D+   +  +M  +   P  RT  +II       +  E
Sbjct: 278 KGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLE 337

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
            +     M+E    PN+  + +++    +    D    +L  M E  + P V+TY+ ++ 
Sbjct: 338 GMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIR 397

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +   G ++   EI   M     +P+   Y+ L  G+ + +   KA  LL  M+ES   P
Sbjct: 398 GYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTP 457

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           ++V + ++I   C  G  D A ++ D + E+G+ P+  T+   +    ++++   A ++ 
Sbjct: 458 SLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLF 517

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
             +K  G+   +  +  L +     G   EA  +L ++ +++
Sbjct: 518 NSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSED 559


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 222/456 (48%), Gaps = 8/456 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH--KPSLVTYTTLLAALTIQKRFNSIHSI 129
           V S + L+ SL ++GK  +A  +   + EGG    P++V Y T++     +   N    +
Sbjct: 195 VFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDL 254

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ + G+ PD + +N+V++A  ++  M++A     +M    + P   TYN LI GY  
Sbjct: 255 FKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSS 314

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+ +E+V++   M R  ++ P++ T ++L+ + C    I EA +V   MA  G  PDV 
Sbjct: 315 TGQWKEAVRVFKEMRRH-SILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 373

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +YN +   YA  G      ++   M  +G+ P+  T  ++I  Y   G + +A+     M
Sbjct: 374 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 433

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +++GV P++V +  +I     I   D   E    M +  V PD   Y+ ++  + T G +
Sbjct: 434 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 493

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            K KE+  ++   G+  D   +S +     +      A+ +    +  G HP+ V+++ +
Sbjct: 494 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSML 553

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+C  G M++A+ VFD M   G+ PN+  + TL+ GY +  +      + + M   G+
Sbjct: 554 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGI 613

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
            P    + ++ +     GL +  + + +K+K  E T
Sbjct: 614 KPSTILYSIIID-----GLFQAGRTVPAKMKFHEMT 644



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 214/473 (45%), Gaps = 39/473 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSIMSQVEEN 136
           LM+      +P+ A A F  L+  G + +++    LL      KR + ++  ++ +  E 
Sbjct: 130 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPEL 189

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG--LTPTTSTYNTLIKGYGIAGKPE 194
           G  PD   ++ ++ +  + G   +A D    M E G   +P    YNT+I G+   G   
Sbjct: 190 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 249

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++  L   M + G + P+L TYN +V A C  + + +A   + +M    + P+  TYN +
Sbjct: 250 KACDLFKEMVQRG-IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 308

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              Y+  G+  +A  V  EM  + + P+  T  +++   CK GKIKEA     TM   G 
Sbjct: 309 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 368

Query: 315 HPNLVIFNLLIKGFV------------EIMDRDGV--------------------DEVLA 342
           +P++  +N+++ G+             ++M  DG+                    D+ + 
Sbjct: 369 NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 428

Query: 343 LMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +  E R   V PDV+TY T++ A    G MD   E F+ M   G+ PD +AY+ L +G+ 
Sbjct: 429 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 488

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
                 KA+EL+  ++ +G H ++V F++II+  C  G +  A  +FD     G+ P+  
Sbjct: 489 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 548

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            +  LM GY    +  +A  +   M + G+ P    +  L       G   E 
Sbjct: 549 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEG 601



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/483 (24%), Positives = 219/483 (45%), Gaps = 36/483 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT------------- 118
           V +   +++   + G   +A  +F  +++ G  P LVTY +++ AL              
Sbjct: 232 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLR 291

Query: 119 --IQKRF--------NSIHS------------IMSQVEENGMDPDSIFFNAVINAFSESG 156
             + KR         N I+             +  ++  + + PD +  + ++ +  + G
Sbjct: 292 QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 351

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            ++EA D F  M   G  P   +YN ++ GY   G   +   L DLM  +G + P+  T+
Sbjct: 352 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG-IAPDFYTF 410

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           NVL++A+ N   + +A  + ++M   G+KPDVVTY T+  A  + G+ D A E   +M  
Sbjct: 411 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 470

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            GV P+      +I G+C  G + +A      +   G+H ++V F+ +I    ++     
Sbjct: 471 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 530

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              +  L     ++PD + YS +M+ +   G M+K   +FD M  AGI+P+   Y  L  
Sbjct: 531 AQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVN 590

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           GY +    ++   L   M++ G  P+ ++++ II G    G    A   F +M E G++ 
Sbjct: 591 GYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAM 650

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           ++ T+  ++ G  + R    A  + + ++A  V     T   + +    T   +EAK + 
Sbjct: 651 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 710

Query: 517 SKI 519
           + I
Sbjct: 711 ASI 713



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 208/436 (47%), Gaps = 1/436 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+ +EA  +F  +      P +VT + L+ +L    +      +   +   G +PD   +
Sbjct: 316 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 375

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++N ++  G + +  D F  M   G+ P   T+N LIK Y   G  ++++ + + M R
Sbjct: 376 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM-R 434

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +  VKP++ TY  ++ A C    + +A    ++M   G+ PD   YN +   +  +G   
Sbjct: 435 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 494

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A+E+I E+ +NG+  +      II+  CK G++ +A          G+HP+ V++++L+
Sbjct: 495 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLM 554

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G+  +   +    V   M    + P+V+ Y T++N +   G +D+   +F +M + GIK
Sbjct: 555 DGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIK 614

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P    YSI+  G  +      A+     M ESG   ++  +  ++ G   +   D AI +
Sbjct: 615 PSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL 674

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F ++    V  N+ T  T++ G  + R+   A+++   +    + P   T+ ++      
Sbjct: 675 FKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIK 734

Query: 506 TGLTKEAKRILSKIKN 521
            GL +EA+ + S ++N
Sbjct: 735 EGLVEEAEDMFSSMQN 750



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 210/423 (49%), Gaps = 7/423 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +++ LM SL + GK +EA+ +F+ +   G  P + +Y  +L     +     +  +  
Sbjct: 337 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 396

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G+ PD   FN +I A++  G +++AM  F +M++ G+ P   TY T+I      G
Sbjct: 397 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 456

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +++++  + M  +G V P+   YN L++ +C   ++ +A  ++ ++  +GM  D+V +
Sbjct: 457 KMDDAMEKFNQMIDQG-VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 515

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           ++I     + G    A+ +     + G+ P+     +++ GYC  GK+++ALR    M  
Sbjct: 516 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 575

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            G+ PN+V++  L+ G+ +I     +DE L+L +E     + P  I YS I++    AG 
Sbjct: 576 AGIEPNVVVYCTLVNGYCKI---GRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGR 632

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
               K  F +M ++GI  D   Y+I+ +G  + +  ++A  L   +       N++   T
Sbjct: 633 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 692

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G      ++ A ++F  +    + PN+ T+  ++    +      AE++   M+  G
Sbjct: 693 MIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 752

Query: 489 VHP 491
             P
Sbjct: 753 CEP 755



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 198/444 (44%), Gaps = 42/444 (9%)

Query: 85  RGKPQEAQAIFNNLIEGGHKPSLV-----TYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           R  P  A A+FN        P ++     TY  L+   T   R     +   Q+   G+ 
Sbjct: 97  RSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLR 156

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            + I  N ++  F E+   +EA+D    +  E G  P   +Y+ L+K     GK  ++  
Sbjct: 157 VNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 216

Query: 199 LLDLMSREGNV-KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           LL +M+  G V  PN+  YN ++  +  E ++ +A ++  +M   G+ PD+VTYN++  A
Sbjct: 217 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 276

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+AE  + +M +  V PN  T   +I GY   G+ KEA+R  + M+ + + P 
Sbjct: 277 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP- 335

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
                                             DV+T S +M +    G + + +++FD
Sbjct: 336 ----------------------------------DVVTLSMLMGSLCKYGKIKEARDVFD 361

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G  PD  +Y+I+  GY  +       +L   M+  G  P+   F  +I  + + G
Sbjct: 362 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 421

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D+A+ +F++M +HGV P++ T+ T++       +   A E    M   GV P K  + 
Sbjct: 422 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 481

Query: 498 LLAEARRATGLTKEAKRILSKIKN 521
            L +     G   +AK ++S+I N
Sbjct: 482 CLIQGFCTHGSLLKAKELISEIMN 505



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 181/373 (48%), Gaps = 7/373 (1%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   +A  IFN + + G KP +VTY T++AAL    + +      +Q+ + G+ PD   +
Sbjct: 421 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 480

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +I  F   G++ +A +   ++  +G+      ++++I      G+  ++  + DL   
Sbjct: 481 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 540

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G + P+   Y++L+  +C    + +A  V   M ++G++P+VV Y T+   Y + G  D
Sbjct: 541 VG-LHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRID 599

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +   +  EM   G++P+     III G  + G+   A      M E G+  ++  +N+++
Sbjct: 600 EGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVL 659

Query: 326 KGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +G  +       DE + L KE R   V  ++IT +T+++       +++ K++F  + ++
Sbjct: 660 RGLFK---NRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 716

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
            + P+   YSI+    ++E   E+AE++  +M  +G  PN  +   ++        + RA
Sbjct: 717 RLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 776

Query: 443 IEVFDKMCEHGVS 455
                K+ E   S
Sbjct: 777 GAYLSKIDERNFS 789



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 126/251 (50%), Gaps = 1/251 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + ++N+L + G+  +AQ IF+  +  G  P  V Y+ L+    +  +      +   +  
Sbjct: 516 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 575

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++P+ + +  ++N + + G ++E +  F +M + G+ P+T  Y+ +I G   AG+   
Sbjct: 576 AGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVP 635

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +      M+  G +  ++ TYN+++R     +   EA  +  ++ A  +K +++T NT+ 
Sbjct: 636 AKMKFHEMTESG-IAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 694

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               Q    ++A+++   +  + + PN  T  I+I+   KEG ++EA     +M+  G  
Sbjct: 695 DGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 754

Query: 316 PNLVIFNLLIK 326
           PN  + N +++
Sbjct: 755 PNSRLLNHVVR 765



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 3/247 (1%)

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD-GV 337
           + P   T  I++    +  + + AL F   +   G+  N++I N L++GF E    D  +
Sbjct: 120 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 179

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG--IKPDAHAYSILA 395
           D +L    E    PDV +YS ++ +    G   +  ++   M + G    P+  AY+ + 
Sbjct: 180 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 239

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G+ +E +  KA +L   M++ G  P++V + +++   C   +MD+A     +M    V 
Sbjct: 240 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 299

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           PN  T+  L++GYS   Q   A  + + M+   + P   T  +L  +    G  KEA+ +
Sbjct: 300 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 359

Query: 516 LSKIKNK 522
              +  K
Sbjct: 360 FDTMAMK 366


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 224/465 (48%), Gaps = 17/465 (3%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   +++ L++ G+ +EA  I + L+  G K S+V  TTL+    +Q+       I  + 
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G+ P  + +  +I   +E G  E+A +   +M++ GL P+T+ +N +IKG       
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +++V L   M+  G   P+  TYN+L+   C  + I EA N+  KM  +G+KP +VTY++
Sbjct: 369 KDAVSLFKEMADSG--IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHS 426

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y  NG  D+A ++  EM   G  PN  T   ++ G+  +    +A      MK+ G
Sbjct: 427 LLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNG 486

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMD 370
           V  N   +N LI G   +     V EV  ++K F      P  +TY++I+N +  AG M 
Sbjct: 487 VSCNDYTYNTLINGLCVV---GRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               ++  M   GI P+   Y+    GY +    + A ++L  +   G  P++  + ++I
Sbjct: 544 SAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLI 603

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+C +G+M  A++V   M + G+ PN+  + + + GY   +    A  + + M   G+ 
Sbjct: 604 FGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGID 663

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP 535
              +T+  L +     G    A ++ S         EM A+ +IP
Sbjct: 664 LDTATYTTLIDGFSKDGNVTFALKLYS---------EMVAKGNIP 699



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 195/412 (47%), Gaps = 2/412 (0%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           ++A ++F  + + G  P   TY  L+  L  +++     ++  ++ E G+ P  + ++++
Sbjct: 369 KDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           +  +  +G M+EA+  + +M   G TP   TY TL+KG+      +++  LL  M + G 
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNG- 486

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V  N  TYN L+   C    + E   ++ +    G  P  +TYN+I   + + G    A 
Sbjct: 487 VSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAF 546

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            V  +M   G+ PN  T    I GYCK      AL+    ++  G+ P++  +N LI GF
Sbjct: 547 AVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGF 606

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +  +     +VL LM +  + P++  Y++ +  +     M++   +++ M K GI  D 
Sbjct: 607 CQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDT 666

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y+ L  G+ ++     A +L   M+  G  P+ + FT +  G C +G +D A ++ D+
Sbjct: 667 ATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDE 726

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
           M    + PN+  +  L+ GY    +   A  +   M    + P  +T+ +L 
Sbjct: 727 MNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/388 (25%), Positives = 194/388 (50%), Gaps = 1/388 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L +R K +EA  ++  + E G KP +VTY +LL    +    +    + +++   G
Sbjct: 392 LIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKG 451

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + +  ++         ++A     +MK++G++    TYNTLI G  + G+  E  
Sbjct: 452 FTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVG 511

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L     EG V P   TYN ++  +     +  A+ V  +M A G+ P++VTY +    
Sbjct: 512 EMLKRFETEGFV-PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDG 570

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y +    D A +++ ++   G++P+      +I G+C+EG +  AL+    M + G+ PN
Sbjct: 571 YCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPN 630

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           + ++N  I G+  +   +    +   M +  ++ D  TY+T+++ +S  G +    +++ 
Sbjct: 631 ISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYS 690

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G  PD   ++ L  G  R  + + A +LL  M      PNV+++  +I+G+  +G
Sbjct: 691 EMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNG 750

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLM 465
            +  A  + D+M E  + P+  T++ L+
Sbjct: 751 KLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 155/324 (47%), Gaps = 1/324 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T LM   I +    +A A+   + + G   +  TY TL+  L +  R   +  ++ 
Sbjct: 456 VVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLK 515

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           + E  G  P ++ +N++IN F ++G M  A   + +M   G+ P   TY + I GY    
Sbjct: 516 RFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTS 575

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + ++K+L+ +  +G ++P++  YN L+  +C E N++ A  V+  M   G+ P++  Y
Sbjct: 576 CCDLALKMLNDVRCKG-LRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVY 634

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N+  T Y      ++A  +  +M   G+  +  T   +I G+ K+G +  AL+    M  
Sbjct: 635 NSFITGYKNLKMMEEALRLYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVA 694

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P+ + F  L  G     D D   ++L  M    + P+V+ Y+ ++N +   G + +
Sbjct: 695 KGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQE 754

Query: 372 CKEIFDDMGKAGIKPDAHAYSILA 395
              + D+M +  I PD   Y IL 
Sbjct: 755 AFRLHDEMLERKIMPDDTTYDILV 778



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 90/416 (21%), Positives = 193/416 (46%), Gaps = 8/416 (1%)

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK 169
           +  ++ A   +  ++    +  ++  + ++PD    +  I +  +  +   A+    KM+
Sbjct: 180 FDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQ 239

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
           ++G  P   T+N+++      G+ EE++ + D +   G  K ++     L+  +C ++ +
Sbjct: 240 DAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGK-KMSVVLATTLMHGYCLQREV 298

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
            +A ++  +    G+ P  VTY  +     + G  ++A E+  +M  +G+ P+     ++
Sbjct: 299 RKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMV 358

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKE 346
           I G   +   K+A+   + M + G+ P+   +N+LI    +   R  + E L L   M E
Sbjct: 359 IKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQ---RRKIREALNLWEKMNE 414

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             V P ++TY +++  +   G MD+  +++ +M   G  P+   Y+ L KG++ +   +K
Sbjct: 415 TGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDK 474

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  LL  M ++G   N   + T+I+G C  G +    E+  +    G  P   T+ +++ 
Sbjct: 475 AYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIIN 534

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G+ +A     A  + Q M A G+ P   T+    +    T     A ++L+ ++ K
Sbjct: 535 GFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCK 590



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 129/255 (50%), Gaps = 1/255 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  +   ++N  I+ G    A A++  +   G  P++VTYT+ +         +    ++
Sbjct: 525 TAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKML 584

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + V   G+ PD   +N++I  F + GNM  A+     M + GL P  S YN+ I GY   
Sbjct: 585 NDVRCKGLRPDIAAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNL 644

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              EE+++L + M +EG +  +  TY  L+  +  + N+T A  +  +M A G  PD +T
Sbjct: 645 KMMEEALRLYEKMIKEG-IDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHIT 703

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +  +     +NG+ D A +++ EM    ++PN     ++I+GY + GK++EA R    M 
Sbjct: 704 FTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEML 763

Query: 311 EYGVHPNLVIFNLLI 325
           E  + P+   +++L+
Sbjct: 764 ERKIMPDDTTYDILV 778



 Score = 62.8 bits (151), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 77/170 (45%)

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           D   +  +M A    G  D    +FD+M  + I+PD    S+      + ++  +A  +L
Sbjct: 176 DAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVL 235

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M ++GF P    F +++      G M+ A+ + D++   G   ++    TLM GY   
Sbjct: 236 RKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQ 295

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           R+  +A +I +     G+ P   T+ +L       G+ ++A  +  ++++
Sbjct: 296 REVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRD 345


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 216/464 (46%), Gaps = 6/464 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M K+    V + T L+++L + GK  EAQ +   ++  G  P  VT++TL+  L      
Sbjct: 118 MAKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSE 177

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN-MEEAMDTFWKMKESGLTPTTSTYNT 182
                ++  V + GM      F  +I       N +E A      +   G TPT   +N 
Sbjct: 178 EQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNL 237

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G+  A   + + KLL++M  +G V PN+ T+ +L+   C    + EA  ++ KM   
Sbjct: 238 VINGFCKAKDLDSAYKLLEVMIEKGCV-PNVFTFTILITGLCKANRVGEAQQLLEKMVMG 296

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P+VVTY+T+     + G+ D A E+   ME     PN  T  I+I G CK  +I+EA
Sbjct: 297 GCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEA 356

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN-PDVITYSTIMN 361
            +    M+E G  P+++ +N LI G  +    D   ++   + E  V+  + +TYST+ +
Sbjct: 357 RQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFH 416

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            ++  G M     IF  +   G  PD   Y+ L   Y +     +  EL+  M   GF P
Sbjct: 417 GYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPP 476

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            V   + ++ G       +RAI++FD M   G + +   +  ++ G + A +  +A  +L
Sbjct: 477 RVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVL 536

Query: 482 QIM---KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           + +   +    +P  S    L E+    G T +AK++L K+  +
Sbjct: 537 EQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSER 580



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/431 (24%), Positives = 201/431 (46%), Gaps = 3/431 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+  L +  +  EAQ +   ++ GG  P++VTY+T++  L  Q + +  + +  
Sbjct: 267 VFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQ 326

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +E     P+ +  N +I+   ++  +EEA   + +M+E+G  P   TYN+LI G   + 
Sbjct: 327 LMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSF 386

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+ +L   +   G    N  TY+ L   +     + +A  +   +   G  PD+ TY
Sbjct: 387 QVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATY 446

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++   Y +   A +  E++ EM   G  P   T   ++ G  +    + A++   +M  
Sbjct: 447 TSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAA 506

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM---KEFRVNPDVITYSTIMNAWSTAGF 368
            G   + +I+NL+++G       D    VL  +   ++ + NP       ++ +    G 
Sbjct: 507 RGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGK 566

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            D  K++   M + G      +Y+ L  G  R Q  ++A ++   M+ +G  P +     
Sbjct: 567 TDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMVSAGPAPEISTVNV 626

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +IS  CS   +D A E+  +M + G  P+++T  TL+ GY ++ +   A ++L+ M   G
Sbjct: 627 VISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRADLARKLLEEMTEAG 686

Query: 489 VHPQKSTFLLL 499
           + P  +T  LL
Sbjct: 687 LEPNDTTHDLL 697



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/500 (23%), Positives = 233/500 (46%), Gaps = 21/500 (4%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T LM  L + G+  EA   F  + +    P ++TYT L+ AL    +F+    ++ ++  
Sbjct: 96  TTLMKGLCDAGRVVEALEHFRAMAKDC-APDVMTYTALVHALCKAGKFDEAQGMLREMVA 154

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY-GIAGKPE 194
            G  PD++ F+ +I+   + G+ E+A      + + G+  + + + T+I+         E
Sbjct: 155 QGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVE 214

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            + K+L ++  +G   P +  +N+++  +C  K++  A+ ++  M   G  P+V T+  +
Sbjct: 215 LASKVLGVVIAKG-FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTIL 273

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
            T   +     +A++++ +M   G  PN  T   +I+G CK+G++ +A    + M+    
Sbjct: 274 ITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNC 333

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            PN+V  N+LI G  +    +   ++   M+E    PD+ITY+++++    +  +D+  +
Sbjct: 334 PPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQ 393

Query: 375 IFDDMGKAGIKP-DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           +F  + ++G+   +A  YS L  GY        A  +   +++ GF P++  +T++I  +
Sbjct: 394 LFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLILEY 453

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C        +E+ ++M   G  P + T   ++ G  E     RA ++   M A G     
Sbjct: 454 CKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAARGCTDDA 513

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK--ERTNEMEAEEDIPVESL---------ERL 542
             + L+ E         +A  +L ++ +K   + N   +  D  VESL         ++L
Sbjct: 514 LIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKTDDAKQL 573

Query: 543 YHK------EATTASYPNLL 556
            HK       A  +SY  LL
Sbjct: 574 LHKMSERGFAAAVSSYNRLL 593



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 181/394 (45%), Gaps = 39/394 (9%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P+   +  +I  FS +G+++ A+    +MK SG       + TL+KG   AG+  E+++ 
Sbjct: 55  PNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEH 114

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
              M+++    P++ TY  LV A C      EA  ++ +M A G  PD VT++T+     
Sbjct: 115 FRAMAKD--CAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLC 172

Query: 260 QNGEADQAEEVIVEM---------------------EHNGVQPNGRTCGIIIS------- 291
           + G  +QA  V+ ++                     ++N V+   +  G++I+       
Sbjct: 173 KFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTV 232

Query: 292 --------GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
                   G+CK   +  A +    M E G  PN+  F +LI G  +        ++L  
Sbjct: 233 LMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEK 292

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M     +P+V+TYST++N     G +D   E+F  M +    P+   ++IL  G  + + 
Sbjct: 293 MVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKR 352

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS-PNLKTFE 462
            E+A +L   M E+G  P+++ + ++I G C    +D A ++F  + E GVS  N  T+ 
Sbjct: 353 IEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYS 412

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           TL  GY+   +   A  I  ++   G  P  +T+
Sbjct: 413 TLFHGYAALGRMADACRIFSMLVDKGFSPDLATY 446



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 198/398 (49%), Gaps = 6/398 (1%)

Query: 102 GHKPSLVTYTTLLAALTIQKRF-NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
           G + + V +TTL+  L    R   ++    +  ++    PD + + A+++A  ++G  +E
Sbjct: 87  GFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCA--PDVMTYTALVHALCKAGKFDE 144

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A     +M   G  P T T++TLI G    G  E++ ++L+ + + G    +   +  ++
Sbjct: 145 AQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSD-AAFETII 203

Query: 221 RAWCNEKNITE-AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +  CN+ N  E A  V+  + A G  P V+ +N +   + +  + D A +++  M   G 
Sbjct: 204 QRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGC 263

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            PN  T  I+I+G CK  ++ EA +    M   G  PN+V ++ +I G  +    D   E
Sbjct: 264 VPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYE 323

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +  LM+     P+V+T++ +++    A  +++ ++++  M + G  PD   Y+ L  G  
Sbjct: 324 LFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLC 383

Query: 400 REQEPEKAEELLMTMIESGFH-PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           +  + ++A +L  T+ ESG    N V ++T+  G+ + G M  A  +F  + + G SP+L
Sbjct: 384 KSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDL 443

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            T+ +L+  Y +  +     E+++ M + G  P+ +T 
Sbjct: 444 ATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTL 481



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 164/352 (46%), Gaps = 3/352 (0%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N  ++        +EA+  F         P   TY  LI+G+  AG  + +++LL+ M  
Sbjct: 26  NCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKS 85

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G  + N   +  L++  C+   + EA      MA     PDV+TY  +  A  + G+ D
Sbjct: 86  SG-FEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKD-CAPDVMTYTALVHALCKAGKFD 143

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A+ ++ EM   G  P+  T   +I G CK G  ++A R    + + G+  +   F  +I
Sbjct: 144 EAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETII 203

Query: 326 KGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           +      +  +   +VL ++      P V+ ++ ++N +  A  +D   ++ + M + G 
Sbjct: 204 QRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGC 263

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+   ++IL  G  +     +A++LL  M+  G  PNVV ++T+I+G C  G +D A E
Sbjct: 264 VPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYE 323

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           +F  M      PN+ T   L+ G  +A++   A ++   M+  G  P   T+
Sbjct: 324 LFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITY 375



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 85/381 (22%), Positives = 168/381 (44%), Gaps = 14/381 (3%)

Query: 192 KPEESVKLLD-LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           KPE  +   D   SR G+   N+ + N  +   C      EA  +     A    P+  T
Sbjct: 3   KPELVLLFFDWARSRVGH---NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFT 59

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +   ++  G+ D A +++ EM+ +G + N      ++ G C  G++ EAL   R M 
Sbjct: 60  YGILIRGFSSAGDLDIAIQLLEEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMA 119

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           +    P+++ +  L+    +    D    +L  M      PD +T+ST+++     G  +
Sbjct: 120 K-DCAPDVMTYTALVHALCKAGKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEE 178

Query: 371 KCKEIFDDMGKAGI-KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +   + +D+ + G+   DA   +I+ +   +    E A ++L  +I  GF P V++F  +
Sbjct: 179 QAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLV 238

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I+G+C    +D A ++ + M E G  PN+ TF  L+ G  +A +   A+++L+ M   G 
Sbjct: 239 INGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGC 298

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI--------PVESLER 541
            P   T+  +       G   +A  +   ++ +     +     +         +E   +
Sbjct: 299 SPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQ 358

Query: 542 LYHKEATTASYPNLLQIPNVV 562
           LYH+   T   P+++   +++
Sbjct: 359 LYHRMRETGCAPDIITYNSLI 379


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 233/462 (50%), Gaps = 10/462 (2%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           KE   +V S   +M+   + G    A++ F  +++ G  P   +Y  L+  L +      
Sbjct: 179 KEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEE 238

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLI 184
              + + +E+ G+ PD + +  V   F   G M  A +   KM  + GL P   TY  LI
Sbjct: 239 ALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLI 298

Query: 185 KGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
            G+   G  EE+++L  DL+S     + N+  Y+VL+ + C    + EA  ++++M A+ 
Sbjct: 299 CGHCQMGNIEEALRLRRDLLS--SGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANN 356

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++PD+VTY+ +     + G+  QA ++  EM  N + PN      I+ G C++G + +A 
Sbjct: 357 LQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDAR 416

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIM 360
            +  ++    + P++ ++N++I G+V++ D   V+E + L K  R   + P ++T+++++
Sbjct: 417 MYFDSLIMSNLRPDVTLYNIMIDGYVKLGD---VEEAVRLYKRLRDKAITPSIVTFNSLI 473

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
             +     + + + + + +   G++P A  Y+ L   Y  E    K  ELL+ M      
Sbjct: 474 YGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIE 533

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P VV +T +I G C    ++ ++++ + M   G++P+  T+ T++  + +A+   +A E+
Sbjct: 534 PTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFEL 593

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           L  M    + P  +T+ +L +     G  ++A R+L  ++++
Sbjct: 594 LDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDR 635



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 103/412 (25%), Positives = 204/412 (49%), Gaps = 1/412 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++SL +RG+  EA  +   +     +P LVTY+ L+  L  Q +      +  ++  N 
Sbjct: 332 LLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNR 391

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+S   + ++    E G + +A   F  +  S L P  + YN +I GY   G  EE+V
Sbjct: 392 IFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAV 451

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L   + R+  + P++ T+N L+  +C  + + EA  ++  +   G++P  VTY T+  A
Sbjct: 452 RLYKRL-RDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNA 510

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G  ++  E+++EM    ++P   T  ++I G CK+ K++E+++    M+  G+ P+
Sbjct: 511 YCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPD 570

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +N +I+ F +  D     E+L  M    + P   TY+ +++     G ++    +  
Sbjct: 571 QITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLV 630

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +    I     AY+ + K +  + + ++A ++   M+E GF  ++  ++ +I+  C   
Sbjct: 631 SLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRC 690

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            ++ A   F  M   GVSP+ + FE ++  +  A       E+L +M  FG+
Sbjct: 691 LINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGL 742



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/418 (23%), Positives = 210/418 (50%), Gaps = 11/418 (2%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            +A  +   + E   +PS+ TY +LL  L   +  + +  + + ++++G    +   + +
Sbjct: 100 HDALFVLVKMKEQNLRPSIQTYNSLLYNL---RHTDIMWDVYNDIKDSGTPQSARTSSII 156

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           ++         +A+    +       P+  ++NT++  Y   G  + +     +M + G 
Sbjct: 157 VDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG- 215

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           + P+  +YN+L+       ++ EA  + + M   G++PD+VTY  +A  +   G    A 
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275

Query: 269 EVIVEMEHN-GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
           E+I +M  + G++P+  T  ++I G+C+ G I+EALR  R +   G   N++++++L+  
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335

Query: 328 FVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
             +   R  VDE L L+ E   N   PD++TYS +++     G + +  +++ +M    I
Sbjct: 336 LCK---RGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRI 392

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P++ A+S + KG   +     A     ++I S   P+V ++  +I G+   G ++ A+ 
Sbjct: 393 FPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVR 452

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           ++ ++ +  ++P++ TF +L++G+ + R+   A  +L+ +K  G+ P   T+  L  A
Sbjct: 453 LYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNA 510



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/317 (23%), Positives = 154/317 (48%), Gaps = 15/317 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++  ++ G  +EA  ++  L +    PS+VT+ +L+      ++      ++  ++ +G
Sbjct: 437 MIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHG 496

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++P ++ +  ++NA+ E GN+ +  +   +M    + PT  TY  +IKG     K EESV
Sbjct: 497 LEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESV 556

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL+ M  +G + P+  TYN +++ +C  K++ +A+ ++  M    ++P   TYN +   
Sbjct: 557 QLLEDMRAKG-LAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDG 615

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+ + A+ V+V ++   +         +I  +C +G  + A++    M E G    
Sbjct: 616 LCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKG---- 671

Query: 318 LVIFNLLIKGFVEIMDR-------DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              F + IK +  +++R       +       +M    V+PD   +  ++NA+  AG + 
Sbjct: 672 ---FEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNAFHRAGHVH 728

Query: 371 KCKEIFDDMGKAGIKPD 387
              E+   M K G+  D
Sbjct: 729 SVFELLAVMIKFGLLHD 745



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 42/209 (20%), Positives = 94/209 (44%), Gaps = 1/209 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV + T ++  L ++ K +E+  +  ++   G  P  +TY T++      K       ++
Sbjct: 535 TVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELL 594

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +  + ++P    +N +I+     G++E+A      +++  +  T   Y T+IK + + 
Sbjct: 595 DDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVK 654

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  + +VK+   M  +G  + +++ Y+ ++   C    I EA      M + G+ PD   
Sbjct: 655 GDAQRAVKVFHQMVEKG-FEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEI 713

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +  +  A+ + G      E++  M   G+
Sbjct: 714 FEMMLNAFHRAGHVHSVFELLAVMIKFGL 742


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 220/452 (48%), Gaps = 12/452 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L +RG+  +A ++ ++++    +PS+VTYT LL A+     F     ++ ++
Sbjct: 139 TYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEM 198

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P+ + +N +IN       +++A     ++   G  P T +Y T++KG   A K 
Sbjct: 199 RAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGL-CAAKR 257

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E V++L     E N  PN  T+++LVR +C    +  A  V+ +M+  G   +    N 
Sbjct: 258 WEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNI 317

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  +  + G  D A E +  M   G  P+  +   ++ G C+ G+ ++A      M    
Sbjct: 318 VINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKN 377

Query: 314 VHPNLVIFNLLIKGFVEIMDRDG-VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFM 369
             PN V FN     F+ I+ + G +D+ + L   M E+  +  ++TY+ ++N +   G +
Sbjct: 378 CPPNEVTFN----TFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRV 433

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D   E+F+ +     +P+   Y+ L  G    +  + A ELL  M+++    NVV F  +
Sbjct: 434 DSALELFNSLP---CEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVL 490

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           +S +C  G ++ AIE+  +M EHG +PNL TF TL+ G +E      A E+L  + + G+
Sbjct: 491 VSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGI 550

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
                T+  + +        +EA ++   +++
Sbjct: 551 SLDTITYSSIVDVLSREDRIEEAVQMFHAVQD 582



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/497 (23%), Positives = 228/497 (45%), Gaps = 45/497 (9%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           + +E   +V + T L+ ++ +     +A  + + +   G  P++VTY  ++  +  + R 
Sbjct: 164 LRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRV 223

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    I++++   G  PD++ +  V+     +   E+    F +M E+   P   T++ L
Sbjct: 224 DDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDML 283

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++ +   G  E ++++LD MS  G    N    N+++ + C +  + +A+  ++ M + G
Sbjct: 284 VRFFCRGGMVERAIEVLDRMSEHG-CTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYG 342

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             PD ++Y T+     + G  + A+E++ EM      PN  T    I   C++G I +A+
Sbjct: 343 CSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAI 402

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M EYG    +V +N L+ GF  +  R  VD  L L       P+ ITY+T++   
Sbjct: 403 LLIEQMPEYGCSVGIVTYNALVNGFC-VQGR--VDSALELFNSLPCEPNTITYTTLLTGL 459

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
             A  +D   E+  +M +     +   +++L   + ++   E+A EL+  M+E G  PN+
Sbjct: 460 CHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNL 519

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           + F T++ G   D + + A+E+   +   G+S +  T+ +++   S   +  R EE +Q+
Sbjct: 520 ITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLS---REDRIEEAVQM 576

Query: 484 MKA-------------------------------FGVH-------PQKSTFLLLAEARRA 505
             A                               F  H       P +ST+++L E    
Sbjct: 577 FHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAR 636

Query: 506 TGLTKEAKRILSKIKNK 522
            GL KEA+ +LS++ ++
Sbjct: 637 EGLLKEARYVLSELCSR 653



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 198/452 (43%), Gaps = 49/452 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N +    +  +A+ I N L   G +P  V+YTT+L  L   KR+  +  +  ++ EN 
Sbjct: 213 IINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENN 272

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT----------------------- 174
             P+ + F+ ++  F   G +E A++   +M E G T                       
Sbjct: 273 CVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAF 332

Query: 175 ------------PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
                       P T +Y T++KG   AG+ E++ +LL+ M R+ N  PN  T+N  +  
Sbjct: 333 EFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRK-NCPPNEVTFNTFICI 391

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C +  I +A  ++ +M   G    +VTYN +   +   G  D A E+   +     +PN
Sbjct: 392 LCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLP---CEPN 448

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI-----KGFVEIMDRDGV 337
             T   +++G C   ++  A      M +     N+V FN+L+     KGFVE       
Sbjct: 449 TITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVE-----EA 503

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E++  M E    P++IT++T+++  +     ++  E+   +   GI  D   YS +   
Sbjct: 504 IELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDV 563

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             RE   E+A ++   + + G  P  V++  I+S  C     DRAI+ F  M  +   PN
Sbjct: 564 LSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPN 623

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             T+  L+ G +       A  +L  + + GV
Sbjct: 624 ESTYVILIEGLAREGLLKEARYVLSELCSRGV 655



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 170/398 (42%), Gaps = 42/398 (10%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  PD      +I      G   +A       + SG       YNTL+ GY   G+ + +
Sbjct: 65  GEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVDVFAYNTLVAGYCRYGRLDAA 124

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            +L+  M     V P+  TY  L+R  C+   + +A +++  M     +P VVTY  +  
Sbjct: 125 RRLIASMP----VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLE 180

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A  ++    QA +V+ EM   G  PN  T  +II+G C+E ++ +A +    +  YG  P
Sbjct: 181 AVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQP 240

Query: 317 NLVIFNLLIKG-------------FVEIMDRDGVD----------------------EVL 341
           + V +  ++KG             F E+++ + V                       EVL
Sbjct: 241 DTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVL 300

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M E     +    + ++N+    G +D   E  ++MG  G  PD  +Y+ + KG  R 
Sbjct: 301 DRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRA 360

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
              E A+ELL  M+     PN V F T I   C  G +D+AI + ++M E+G S  + T+
Sbjct: 361 GRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTY 420

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             L+ G+       R +  L++  +    P   T+  L
Sbjct: 421 NALVNGFC---VQGRVDSALELFNSLPCEPNTITYTTL 455



 Score = 66.2 bits (160), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/177 (22%), Positives = 87/177 (49%), Gaps = 9/177 (5%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT----IQKRFNSIH 127
           V +   L++   ++G  +EA  +   ++E G  P+L+T+ TLL  +T     ++    +H
Sbjct: 484 VVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLH 543

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            ++S+    G+  D+I ++++++  S    +EEA+  F  +++ G+ P    YN ++   
Sbjct: 544 GLVSK----GISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKILSAL 599

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
               + + ++     M    +  PN  TY +L+     E  + EA  V+ ++ + G+
Sbjct: 600 CKRCETDRAIDFFAHMV-SNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 67/140 (47%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L++ + E    +EA  + + L+  G     +TY++++  L+ + R      +   V
Sbjct: 521 TFNTLLDGITEDCNSEEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAV 580

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++ GM P ++ +N +++A  +    + A+D F  M  +   P  STY  LI+G    G  
Sbjct: 581 QDMGMRPKAVMYNKILSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLL 640

Query: 194 EESVKLLDLMSREGNVKPNL 213
           +E+  +L  +   G +  +L
Sbjct: 641 KEARYVLSELCSRGVLSKSL 660


>gi|356561705|ref|XP_003549120.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/404 (28%), Positives = 202/404 (50%), Gaps = 4/404 (0%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
             A A FN ++     P    +  +L++L   KR+ ++ S+  Q E NG+ PD    + +
Sbjct: 40  HHAVASFNLMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSIL 99

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           IN F    ++  A   F  + + G  P   T NTLIKG    G+ ++++   D +  +G 
Sbjct: 100 INCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQG- 158

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            + +  +Y  L+   C          ++ K+    +KPDVV YNTI  +  +N     A 
Sbjct: 159 FQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDAC 218

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           +V  EM   G+ P+  T   +I G+C  GK+KEA      MK   ++P++  F++LI   
Sbjct: 219 DVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDAL 278

Query: 329 VEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            +   +  VDE ++L +E +   + PD++TY+++++       +++   +  +M + GI+
Sbjct: 279 GKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQ 338

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD ++Y+IL  G  +    E A+E    ++  G H NV  +  +I+G C  G    A+++
Sbjct: 339 PDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDL 398

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             KM   G  PN  TF T++   SE  +  +AE+IL+ M A G+
Sbjct: 399 KSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 168/320 (52%), Gaps = 16/320 (5%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+  L  RG+ ++     + ++  G +   V+Y TL+  L       ++  ++ ++
Sbjct: 130 TLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKL 189

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E + + PD + +N +IN+  ++  + +A D + +M   G++P   TY TLI G+ I GK 
Sbjct: 190 EGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKM 249

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE---KNITEAWNVMHKMAASGMKPDVVT 250
           +E+  LL+ M  + N+ P++ T++VL+ A   E   K + EA ++  +M    M PD+VT
Sbjct: 250 KEAFSLLNEMKLK-NINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVT 308

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++     +N   ++A  ++ EM+ +G+QP+  +  I++ G CK G+++ A  F + + 
Sbjct: 309 YNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLL 368

Query: 311 EYGVHPNLVIFNLLIKG------FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
             G H N+  +N++I G      F E MD     E    M      P+ IT+ TI+ A S
Sbjct: 369 VKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCM------PNAITFRTIICALS 422

Query: 365 TAGFMDKCKEIFDDMGKAGI 384
                DK ++I  +M   G+
Sbjct: 423 EKDENDKAEKILREMIARGL 442



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/352 (24%), Positives = 171/352 (48%), Gaps = 6/352 (1%)

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P T  +N ++       +    + L       G + P+L T ++L+  +C++ +IT A++
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNG-ITPDLCTLSILINCFCHQAHITLAFS 114

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           V   +   G  PD +T NT+       GE  +      ++   G Q +  + G +I+G C
Sbjct: 115 VFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLC 174

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           K G+ K   R  R ++ + V P++V++N +I    +        +V + M    ++PDV+
Sbjct: 175 KAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVV 234

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           TY+T+++ +   G M +   + ++M    I PD + +S+L     +E + +  +E  M++
Sbjct: 235 TYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSVLIDALGKEGKKKMVDEA-MSL 293

Query: 415 IESGFH----PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
            E   H    P++V + ++I G C +  ++RAI +  +M EHG+ P++ ++  L+ G  +
Sbjct: 294 FEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCK 353

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             +   A+E  Q +   G H     + ++       GL  EA  + SK++ K
Sbjct: 354 GGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGK 405



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/349 (22%), Positives = 157/349 (44%), Gaps = 4/349 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +++ L+N    +     A ++F N+++ G  P  +T  TL+  L  +           QV
Sbjct: 95  TLSILINCFCHQAHITLAFSVFANILKRGFHPDAITLNTLIKGLCFRGEIKKTLYFHDQV 154

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G   D + +  +IN   ++G  +       K++   + P    YNT+I         
Sbjct: 155 VAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLL 214

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++  +   M  +G + P++ TY  L+  +C    + EA++++++M    + PDV T++ 
Sbjct: 215 GDACDVYSEMIVKG-ISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMKLKNINPDVYTFSV 273

Query: 254 IATAYAQNGE---ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +  A  + G+    D+A  +  EM+H  + P+  T   +I G CK   ++ A+   + MK
Sbjct: 274 LIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALLKEMK 333

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E+G+ P++  + +L+ G  +    +   E    +     + +V  Y+ ++N    AG   
Sbjct: 334 EHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQHLLVKGCHLNVWPYNVMINGLCKAGLFG 393

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +  ++   M   G  P+A  +  +      + E +KAE++L  MI  G 
Sbjct: 394 EAMDLKSKMEGKGCMPNAITFRTIICALSEKDENDKAEKILREMIARGL 442



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/308 (22%), Positives = 128/308 (41%), Gaps = 39/308 (12%)

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P    +N I ++  +N        +  + E NG+ P+  T  I+I+ +C +  I  A   
Sbjct: 56  PPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFS- 114

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
                        V  N+L +GF                     +PD IT +T++     
Sbjct: 115 -------------VFANILKRGF---------------------HPDAITLNTLIKGLCF 140

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G + K     D +   G + D  +Y  L  G  +  E +    LL  +      P+VV+
Sbjct: 141 RGEIKKTLYFHDQVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVM 200

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           + TII+  C +  +  A +V+ +M   G+SP++ T+ TL+ G+    +   A  +L  MK
Sbjct: 201 YNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIMGKMKEAFSLLNEMK 260

Query: 486 AFGVHPQKSTFLLLAEARRATG---LTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
              ++P   TF +L +A    G   +  EA  +  ++K+K    ++     + ++ L + 
Sbjct: 261 LKNINPDVYTFSVLIDALGKEGKKKMVDEAMSLFEEMKHKNMIPDIVTYNSL-IDGLCKN 319

Query: 543 YHKEATTA 550
           +H E   A
Sbjct: 320 HHLERAIA 327



 Score = 47.4 bits (111), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 60/139 (43%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   L++ L +    + A A+   + E G +P + +YT LL  L    R         
Sbjct: 306 IVTYNSLIDGLCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKGGRLEIAKEFFQ 365

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G   +   +N +IN   ++G   EAMD   KM+  G  P   T+ T+I       
Sbjct: 366 HLLVKGCHLNVWPYNVMINGLCKAGLFGEAMDLKSKMEGKGCMPNAITFRTIICALSEKD 425

Query: 192 KPEESVKLLDLMSREGNVK 210
           + +++ K+L  M   G +K
Sbjct: 426 ENDKAEKILREMIARGLLK 444


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 207/394 (52%), Gaps = 1/394 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T +++ L ++G+   A+A+ + L+  G KPS++TY TLL      K    ++ I+S
Sbjct: 188 VCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILS 247

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +E+N +D +   +  +I  +S S  +EEA   F +M + G+ P    Y ++I      G
Sbjct: 248 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 307

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + +  L D M+ E  + PN  TY  L+   C    +  A  +++ M + G+  + V +
Sbjct: 308 NMKRAFVLFDEMT-ERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIF 366

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   Y + G  D+A  +   M+  G + +  TC II SG+C+  + +EA R   TM+E
Sbjct: 367 NTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 426

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV PN+V F++LI  + +  +      +  +M++    P V+TY+  +  +   G M++
Sbjct: 427 RGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEE 486

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++ ++M + G+ PD + Y+ L  G       ++A EL   M + G + NVV +T IIS
Sbjct: 487 AYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIIS 546

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           G   DG  D A +++D+M + G+ P+   + +L+
Sbjct: 547 GLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 580



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 191/402 (47%), Gaps = 16/402 (3%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY- 187
            + Q+ ++G++     + AV++   + G +  A     ++   G  P+  TYNTL+ GY 
Sbjct: 175 FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYI 234

Query: 188 ---GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
               + G  E    +L LM +   V  N+ TY +L+  +     I EA  +  +M   G+
Sbjct: 235 EIKDVGGVNE----ILSLMEK-NVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGI 289

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           +PDV  Y +I     + G   +A  +  EM    + PN  T G +I+G CK G++K A  
Sbjct: 290 EPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEM 349

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMN 361
               M+  GV  N VIFN L+ G+ +   +  +DE L L   M++     D  T + I +
Sbjct: 350 MVNDMQSKGVDVNRVIFNTLMDGYCK---KGMIDEALRLQNIMQQKGFEIDAFTCNIIAS 406

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +  +   ++ K +   M + G+ P+  ++SIL   Y +EQ   +A  L   M + G  P
Sbjct: 407 GFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 466

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +VV +   I  +C  G M+ A ++ ++M E G+ P+  T+ +L+ G   +    RA E+ 
Sbjct: 467 SVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELF 526

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
             M   G++    T+ ++       G   EA ++  ++ NKE
Sbjct: 527 NEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEM-NKE 567



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 206/419 (49%), Gaps = 3/419 (0%)

Query: 103 HKPSLV-TYTTLLAALTIQKR-FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
           ++PS+V  +  +L  + +  R F+S   +     + G + D       + A   SGNME 
Sbjct: 112 NEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMEL 171

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
            ++   +M +SG+     ++  ++ G    G+   +  L+D +  +G  KP++ TYN L+
Sbjct: 172 CVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKG-FKPSVITYNTLL 230

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
             +   K++     ++  M  + +  +V TY  +   Y+++ + ++AE++  EM   G++
Sbjct: 231 NGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIE 290

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+      II+  CK G +K A      M E  + PN   +  LI G  +  +    + +
Sbjct: 291 PDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMM 350

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           +  M+   V+ + + ++T+M+ +   G +D+   + + M + G + DA   +I+A G+ R
Sbjct: 351 VNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCR 410

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
               E+A+ LL+TM E G  PNVV F+ +I  +C + +   A  +F  M + G +P++ T
Sbjct: 411 SNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVT 470

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +   +  Y +  +   A +++  M+  G+ P   T+  L +  RA+G    A  + +++
Sbjct: 471 YNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEM 529


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 207/394 (52%), Gaps = 1/394 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T +++ L ++G+   A+A+ + L+  G KPS++TY TLL      K    ++ I+S
Sbjct: 192 VCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILS 251

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +E+N +D +   +  +I  +S S  +EEA   F +M + G+ P    Y ++I      G
Sbjct: 252 LMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFG 311

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + +  L D M+ E  + PN  TY  L+   C    +  A  +++ M + G+  + V +
Sbjct: 312 NMKRAFVLFDEMT-ERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIF 370

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   Y + G  D+A  +   M+  G + +  TC II SG+C+  + +EA R   TM+E
Sbjct: 371 NTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEE 430

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV PN+V F++LI  + +  +      +  +M++    P V+TY+  +  +   G M++
Sbjct: 431 RGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEE 490

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++ ++M + G+ PD + Y+ L  G       ++A EL   M + G + NVV +T IIS
Sbjct: 491 AYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIIS 550

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           G   DG  D A +++D+M + G+ P+   + +L+
Sbjct: 551 GLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 584



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 191/402 (47%), Gaps = 16/402 (3%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY- 187
            + Q+ ++G++     + AV++   + G +  A     ++   G  P+  TYNTL+ GY 
Sbjct: 179 FLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYI 238

Query: 188 ---GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
               + G  E    +L LM +   V  N+ TY +L+  +     I EA  +  +M   G+
Sbjct: 239 EIKDVGGVNE----ILSLMEK-NVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGI 293

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           +PDV  Y +I     + G   +A  +  EM    + PN  T G +I+G CK G++K A  
Sbjct: 294 EPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEM 353

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMN 361
               M+  GV  N VIFN L+ G+ +   +  +DE L L   M++     D  T + I +
Sbjct: 354 MVNDMQSKGVDVNRVIFNTLMDGYCK---KGMIDEALRLQNIMQQKGFEIDAFTCNIIAS 410

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +  +   ++ K +   M + G+ P+  ++SIL   Y +EQ   +A  L   M + G  P
Sbjct: 411 GFCRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAP 470

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +VV +   I  +C  G M+ A ++ ++M E G+ P+  T+ +L+ G   +    RA E+ 
Sbjct: 471 SVVTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELF 530

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
             M   G++    T+ ++       G   EA ++  ++ NKE
Sbjct: 531 NEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEM-NKE 571



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 101/419 (24%), Positives = 206/419 (49%), Gaps = 3/419 (0%)

Query: 103 HKPSLV-TYTTLLAALTIQKR-FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
           ++PS+V  +  +L  + +  R F+S   +     + G + D       + A   SGNME 
Sbjct: 116 NEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMEL 175

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
            ++   +M +SG+     ++  ++ G    G+   +  L+D +  +G  KP++ TYN L+
Sbjct: 176 CVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKG-FKPSVITYNTLL 234

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
             +   K++     ++  M  + +  +V TY  +   Y+++ + ++AE++  EM   G++
Sbjct: 235 NGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIE 294

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+      II+  CK G +K A      M E  + PN   +  LI G  +  +    + +
Sbjct: 295 PDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMM 354

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           +  M+   V+ + + ++T+M+ +   G +D+   + + M + G + DA   +I+A G+ R
Sbjct: 355 VNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCR 414

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
               E+A+ LL+TM E G  PNVV F+ +I  +C + +   A  +F  M + G +P++ T
Sbjct: 415 SNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVT 474

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +   +  Y +  +   A +++  M+  G+ P   T+  L +  RA+G    A  + +++
Sbjct: 475 YNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEM 533


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 229/444 (51%), Gaps = 2/444 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           +L N +++  K  EA  +F ++I+    PSL+ ++ L +A+  +K ++ +     +++ N
Sbjct: 40  RLRNGIVDI-KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLN 98

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G++ +    N +IN F     +  A     +  + G  P T T++TLI G+ + G+  E+
Sbjct: 99  GIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEA 158

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           V L+D M  E   +PN+ T N L+   C +  +TEA  ++ +M   G + + +TY  +  
Sbjct: 159 VALVDRMV-EMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLN 217

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              ++G    A ++  +ME   ++ +     I+I   CK+G + +AL     M+  G+  
Sbjct: 218 RMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKA 277

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++V ++ +I G       D   ++L  M    + P+V+T+S +++ +   G + + KE++
Sbjct: 278 DVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELY 337

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M   GI PD   YS L  G+ +E    +A ++L  M+  G  PN+V ++ +I+ +C  
Sbjct: 338 NEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKA 397

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             +D  + +F ++   G+  +  T+ TL+ G+ ++ +   A+E+ Q M + GV P   T+
Sbjct: 398 KRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTY 457

Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
            +L +     G  ++A  I  K++
Sbjct: 458 GILLDGLCDNGELQKALEIFEKMQ 481



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 213/429 (49%), Gaps = 1/429 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L+N     G+  EA A+ + ++E  ++P++VT  TL+  L ++ R      ++ ++
Sbjct: 141 TFSTLINGFCLEGRVSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRM 200

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            + G + + I +  V+N   +SGN   A+D F KM+E  +  +   Y+ +I      G  
Sbjct: 201 VKYGCEANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNL 260

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++++ L + M  +G +K ++  Y+ ++   CN+    +   ++ +M    + P+VVT++ 
Sbjct: 261 DDALSLFNEMEMKG-IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSA 319

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + + G+  +A+E+  EM   G+ P+  T   +I G+CKE ++ EA +    M   G
Sbjct: 320 LIDVFVKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKG 379

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             PN+V +++LI  + +    D    +   +    +  D +TY+T++  +  +G ++  K
Sbjct: 380 CEPNIVTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAK 439

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+F +M   G+ P    Y IL  G     E +KA E+   M +S     + I+  II G 
Sbjct: 440 ELFQEMVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGM 499

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C+   +D A  +F  +   GV P++ T+  ++ G  +      A+ + + MK  G  P  
Sbjct: 500 CNASKVDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSD 559

Query: 494 STFLLLAEA 502
            T+ +L  A
Sbjct: 560 CTYNILIRA 568



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 85/395 (21%), Positives = 184/395 (46%), Gaps = 1/395 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N + + G    A  +F  + E   K S+V Y+ ++ +L      +   S+ +++E  G
Sbjct: 215 VLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKG 274

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D + ++++I      G  ++      +M    + P   T++ LI  +   GK  E+ 
Sbjct: 275 IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAK 334

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L + M   G + P+  TY+ L+  +C E  + EA  ++  M + G +P++VTY+ +  +
Sbjct: 335 ELYNEMVARG-IAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINS 393

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y +    D    +  E+   G+  +  T   ++ G+C+ GK+  A    + M   GV P+
Sbjct: 394 YCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPS 453

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V + +L+ G  +  +     E+   M++ R+   +  Y+ I++    A  +D    +F 
Sbjct: 454 VVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFC 513

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +   G+KPD   Y+++  G  ++    +A+ L   M E G  P+   +  +I       
Sbjct: 514 SLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRAHLGGS 573

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            +  ++E+ ++M   G + +  T + ++   S+ R
Sbjct: 574 GVISSVELIEEMKMRGFAADASTIKMVVVMLSDGR 608


>gi|168038876|ref|XP_001771925.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162676707|gb|EDQ63186.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 831

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/532 (24%), Positives = 242/532 (45%), Gaps = 109/532 (20%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R  T L+N   +RG    A+A F ++   G +P++ +YT L+ A  + +      + + +
Sbjct: 193 RDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYTNLIHAYAVAQDLRGAIACVEE 252

Query: 133 VEENGMDPDS-----------------------------------IFFNAVINAFSESGN 157
           +E  G+ P++                                   + +N +I+A+ ++GN
Sbjct: 253 MEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSENWHHNDVIYNNIIHAYCKAGN 312

Query: 158 MEEA-----------------------------------MDTFWKMK---ESGLTPTTST 179
           ME A                                   ++ F ++K   E+GL+PT  +
Sbjct: 313 MERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKCLNVFRRLKARTETGLSPTVVS 372

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           Y  LI  Y   GK ++++++ + M  +G +K N +TY++++  +    +   A++V   M
Sbjct: 373 YGCLINLYSKLGKMDKALQISNEMEDQG-IKHNRKTYSMIIDGYVQLGDTANAFSVFEDM 431

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
           + +G+KPD +TYN +  A+ +NG+ ++A E++  ME     P  RT  III G+ K G +
Sbjct: 432 SNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKIGDL 491

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEI--MDRDG--VDEVLAL------------ 343
           + A    R MK  G  P+   +N+++ G  +   MDR    +DE++              
Sbjct: 492 RMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERSYTTL 551

Query: 344 -------------------MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
                              +KE  + PDVI Y++++ A   AG M     I  +M  AG+
Sbjct: 552 IEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMAAAGV 611

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
             + + Y+IL  G+ +  +  +A +++  M   G  P++  +T+ I+  C  G M +A E
Sbjct: 612 PMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDMLKATE 671

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             ++M + GV PNL+ + TL+ G++ A  P +A      MK+ G+ P K  +
Sbjct: 672 TIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLY 723



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 95/366 (25%), Positives = 178/366 (48%), Gaps = 1/366 (0%)

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNME 159
           E G  P++V+Y  L+   +   + +    I +++E+ G+  +   ++ +I+ + + G+  
Sbjct: 363 ETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTA 422

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
            A   F  M  +G+ P   TYN L+  +   G+   +++LL  M   G+  P LRTY ++
Sbjct: 423 NAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARME-SGDCPPTLRTYTII 481

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +  +    ++  A+  +  M  +G +P   TYN I    AQ G+ D+A  +I EM   GV
Sbjct: 482 IDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGV 541

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            PN R+   +I GY   G +  A ++   +KE G+ P+++ +  L+K   +         
Sbjct: 542 HPNERSYTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLA 601

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           + A M    V  +   Y+ +++ W+  G M +  +I   M   G+ PD H+Y+       
Sbjct: 602 ITAEMAAAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACC 661

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +  +  KA E +  M + G  PN+  +TT+I GW S    ++A+  +D+M   G+ P+  
Sbjct: 662 KAGDMLKATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKP 721

Query: 460 TFETLM 465
            +  +M
Sbjct: 722 LYHCIM 727



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 186/396 (46%), Gaps = 7/396 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV S   L+N   + GK  +A  I N + + G K +  TY+ ++          +  S+ 
Sbjct: 369 TVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMIIDGYVQLGDTANAFSVF 428

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   G+ PD I +N ++NAF ++G M  A++   +M+     PT  TY  +I G+   
Sbjct: 429 EDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDCPPTLRTYTIIIDGFMKI 488

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    + + +  M   G  +P+  TYNV++        +  A +++ +M  +G+ P+  +
Sbjct: 489 GDLRMAFETVRDMKMAG-FRPSAATYNVIMHGLAQAGQMDRAASIIDEMVVAGVHPNERS 547

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+   YA  G+   A +    ++  G++P+      ++   CK G+++  L     M 
Sbjct: 548 YTTLIEGYACIGDMGLAFKYFNRIKEVGLKPDVIAYASLLKACCKAGRMQSTLAITAEMA 607

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             GV  N  I+N+L+ G+ +  D     +++  M+   + PD+ +Y++ +NA   AG M 
Sbjct: 608 AAGVPMNNYIYNILLDGWAQRGDMWEASDIMQKMRHEGLTPDIHSYTSFINACCKAGDML 667

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K  E  + M + G++P+  AY+ L  G+     PEKA      M  +G  P+  ++  I+
Sbjct: 668 KATETIEQMKQQGVQPNLQAYTTLIHGWASASYPEKALICYDEMKSAGMIPDKPLYHCIM 727

Query: 431 SGWCSDGSM------DRAIEVFDKMCEHGVSPNLKT 460
           +   S  ++      D  + V  +M + G+  +  T
Sbjct: 728 TSLLSRAAVARETVFDGVLRVTSEMVDQGICVDFAT 763



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 93/365 (25%), Positives = 165/365 (45%), Gaps = 40/365 (10%)

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
           P+++ K++D   R    KP  R + +LV  +    +   A      M A+G++P+V +Y 
Sbjct: 174 PKDARKVVDAFKRIK--KPKQRDHTLLVNYYGKRGDKHSARAAFESMRAAGIEPNVHSYT 231

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG-------------------- 292
            +  AYA   +   A   + EME  GV PN  T  +IISG                    
Sbjct: 232 NLIHAYAVAQDLRGAIACVEEMEAEGVSPNAATYSVIISGYGRLGDVEAAERWFQRALSE 291

Query: 293 ---------------YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
                          YCK G ++ A      M+E G+   L ++N+L+ G+V     D  
Sbjct: 292 NWHHNDVIYNNIIHAYCKAGNMERAEAIMTAMEEQGLEATLGLYNMLMDGYVHCRAVDKC 351

Query: 338 DEVLALMK---EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
             V   +K   E  ++P V++Y  ++N +S  G MDK  +I ++M   GIK +   YS++
Sbjct: 352 LNVFRRLKARTETGLSPTVVSYGCLINLYSKLGKMDKALQISNEMEDQGIKHNRKTYSMI 411

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             GYV+  +   A  +   M  +G  P+ + +  +++ +C +G M+RA+E+  +M     
Sbjct: 412 IDGYVQLGDTANAFSVFEDMSNAGIKPDGITYNILMNAFCKNGQMNRALELLARMESGDC 471

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            P L+T+  ++ G+ +      A E ++ MK  G  P  +T+ ++       G    A  
Sbjct: 472 PPTLRTYTIIIDGFMKIGDLRMAFETVRDMKMAGFRPSAATYNVIMHGLAQAGQMDRAAS 531

Query: 515 ILSKI 519
           I+ ++
Sbjct: 532 IIDEM 536


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 231/501 (46%), Gaps = 41/501 (8%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K+ C     + + L+N L   G+  EA  +   + E G +P++ TYT  +++L    R
Sbjct: 258 MVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGR 317

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +   +++  + + G  P    + A+I+    +G ME A+  + KM + GL P T TYN 
Sbjct: 318 VDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNA 377

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI      G+   ++K+ D M   G +  N +TYN +++      +I +A  V +KM   
Sbjct: 378 LINELCTEGRFGIALKIFDWMEGHGTL-ANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKD 436

Query: 243 GMKPDVVTYNTIA-----------------------------------TAYAQNGEADQA 267
           G  P VVTYNT+                                    + + + G+ D A
Sbjct: 437 GPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSA 496

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
                EM   G+ PN  T   +I GYCKEGKI  AL     M+E G   ++  +N +I G
Sbjct: 497 TSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISG 556

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             +       ++  A M E  + P+ ITY++++N        +   +IF +M K    P+
Sbjct: 557 LSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPN 616

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
           AH Y+ L  G  +E + + AE L     E+G  P +  ++T++SG C +G  + A ++ +
Sbjct: 617 AHTYTSLIYGLCQEGKVDAAERL----TENGCEPTIDTYSTLVSGLCREGRSNEASQLVE 672

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            M E G+SP+++ + +L+  + ++ +   A EI  +M   G  P    + +L  A     
Sbjct: 673 NMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVS 732

Query: 508 LTKEAKRILSKIKNKERTNEM 528
             +EA  I   +  K+  +++
Sbjct: 733 RAEEALNIFQSLLKKQWNSDL 753



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 221/452 (48%), Gaps = 1/452 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ S   L+  L +      AQ ++  +   G KPSL+T+ T++  L  + +      + 
Sbjct: 161 TLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVF 220

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++ +  + PD+  + ++I     +  +++A + F +M + G  P + TY+TLI G    
Sbjct: 221 NKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNE 280

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+  E++ +L+ M+ +G ++P + TY V + + C+   + +A N++  M   G  P V T
Sbjct: 281 GRIGEAMDMLEEMTEKG-IEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQT 339

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  I +   + G+ + A  +  +M   G+ PN  T   +I+  C EG+   AL+    M+
Sbjct: 340 YTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWME 399

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            +G   N   +N +IKG   + D +    V   M +   +P V+TY+T++      G+++
Sbjct: 400 GHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLN 459

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                   M ++  +PD   Y  L  G+ +  + + A      M++ G  PN   +T +I
Sbjct: 460 NATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMI 519

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+C +G +D A+ +F++M E+G S +++T+  ++ G S+  +   AE+    M   G+ 
Sbjct: 520 DGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQ 579

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+  L         T  A +I  +++ K
Sbjct: 580 PNTITYTSLINGLCKNTATNLAFKIFHEMEKK 611



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 206/448 (45%), Gaps = 7/448 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   ++N L ++GK QEA  +FN + +    P   TYT+L+      ++ +    + 
Sbjct: 196 SLLTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVF 255

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ ++G +P+S+ ++ +IN     G + EAMD   +M E G+ PT  TY   I      
Sbjct: 256 DRMVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDI 315

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ ++++ L+  M ++G   P+++TY  ++        +  A  + HKM   G+ P+ VT
Sbjct: 316 GRVDDAINLVRSMGKKG-CSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVT 374

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +       G    A ++   ME +G   N +T   II G      I++A+     M 
Sbjct: 375 YNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKML 434

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDR---DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
           + G  P +V +N LI   VE + R   +     L +MKE    PD  TY  +++ +   G
Sbjct: 435 KDGPSPTVVTYNTLI---VENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGG 491

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +D     F +M K GI P+   Y+ +  GY +E + + A  L   M E+G   ++  + 
Sbjct: 492 KLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYN 551

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            IISG         A +   KM E G+ PN  T+ +L+ G  +      A +I   M+  
Sbjct: 552 AIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKK 611

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRI 515
              P   T+  L       G    A+R+
Sbjct: 612 NCLPNAHTYTSLIYGLCQEGKVDAAERL 639



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 93/408 (22%), Positives = 193/408 (47%), Gaps = 5/408 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           ++  +++  L      ++A  +FN +++ G  P++VTY TL+     +   N+    +  
Sbjct: 408 QTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYM 467

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           ++E+  +PD   +  +I+ F + G ++ A   F++M + G++P   TY  +I GY   GK
Sbjct: 468 MKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGK 527

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            + ++ L + M   G    ++ TYN ++         +EA     KM   G++P+ +TY 
Sbjct: 528 IDVALSLFERMEENG-CSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYT 586

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++     +N   + A ++  EME     PN  T   +I G C+EGK+  A R    + E 
Sbjct: 587 SLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAER----LTEN 642

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G  P +  ++ L+ G       +   +++  MKE  ++P +  Y +++ A   +  +D  
Sbjct: 643 GCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCA 702

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            EIF+ M   G +P    Y +L          E+A  +  ++++  ++ +++++T ++ G
Sbjct: 703 LEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDG 762

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
              +G  D  ++    M     +P+L T+  L    S+  +    ++I
Sbjct: 763 LLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQI 810



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/308 (21%), Positives = 130/308 (42%), Gaps = 40/308 (12%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T +++   + GK   A ++F  + E G   S+ TY  +++ L+   RF+      +++
Sbjct: 514 TYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKM 573

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E G+ P++I + ++IN   ++     A   F +M++    P   TY +LI G    GK 
Sbjct: 574 TEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKV 633

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + + +L      E   +P + TY+ LV   C E    EA  ++  M   G+ P +  Y +
Sbjct: 634 DAAERL-----TENGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCS 688

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPN--------GRTCGI----------------- 288
           +  A+ ++ + D A E+   M   G QP+           CG+                 
Sbjct: 689 LLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQ 748

Query: 289 ----------IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
                     ++ G  +EG     ++F   M+     P+L  + +L +   ++    G D
Sbjct: 749 WNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTD 808

Query: 339 EVLALMKE 346
           ++   ++E
Sbjct: 809 QIGNRLRE 816


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 215/438 (49%), Gaps = 4/438 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAI-FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           + T L+ +L  + +  +A  I    + E G  P + +Y+TLL  L  +K+      ++  
Sbjct: 50  AFTPLLRTLCAKKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHM 109

Query: 133 VEENGMD--PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + E+G +  PD + ++ VI+ F + G++ +A   F KM + G+ P   T N++I G    
Sbjct: 110 MAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKV 169

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              +++  +L  M  E ++ PN  TYN L+  + +    TEA  ++ +M+  G +P+VVT
Sbjct: 170 QAMDKAEAVLQQMIDE-HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVT 228

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +     ++G   +A E+   M  +G +P+  T G ++ GY  EG + E       M 
Sbjct: 229 YNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMV 288

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G+  N   F++ I  + +    D        M++    PD++TY+T+++     G +D
Sbjct: 289 QNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLD 348

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                F  M   G+ P+   ++ L  G+    + EKAEEL   M++ G  P+V IFT +I
Sbjct: 349 DAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMI 408

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
                +G +  A ++FD M   G  PN+ ++ T++ GY  A +     ++L  M   G+ 
Sbjct: 409 DRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLK 468

Query: 491 PQKSTFLLLAEARRATGL 508
           P   TF  L +   + GL
Sbjct: 469 PTAVTFNTLLDGMVSMGL 486



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 204/435 (46%), Gaps = 59/435 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHK--PSLVTYTTLLAALTIQKRFNSIHSI 129
           V S + L+  L    K +EA  + + + E G    P +V+Y+T++     +      +++
Sbjct: 84  VFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTL 143

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ ++G+ P+ +  N+VI+   +   M++A     +M +  + P  +TYN+LI GY  
Sbjct: 144 FCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLS 203

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +G+  E+V++L  MSR+G  +PN+ TYN+L+   C      EA  + + M  SG KPD  
Sbjct: 204 SGQWTEAVRILKEMSRDGQ-RPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDAT 262

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRFART 308
           TY ++   YA  G   +   V   M  NG++ N  T  I I  YCK G++ EA L F + 
Sbjct: 263 TYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIK- 321

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG- 367
           M++ G  P++V +  +I G  +I   D        M +  ++P++IT++T+++ +S  G 
Sbjct: 322 MQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGK 381

Query: 368 ----------FMDK------------------------CKEIFDDMGKAGIKPDAHAYSI 393
                      MD+                         +++FD M +AG KP+  +Y+ 
Sbjct: 382 WEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNT 441

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG-------------------WC 434
           +  GY    E  +  +LL  M+  G  P  V F T++ G                    C
Sbjct: 442 MIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCC 501

Query: 435 SDGSMDRAIEVFDKM 449
            DG ++  + +F +M
Sbjct: 502 EDGRIEDILTLFREM 516



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 194/424 (45%), Gaps = 37/424 (8%)

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           M++     + PD   F  +I+   ++G +        ++ ++GL      +  L++    
Sbjct: 1   MARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCA 60

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG--MKPD 247
             +  +++ ++     E    P++ +Y+ L++  C EK   EA  ++H MA  G    PD
Sbjct: 61  KKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPD 120

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           VV+Y+T+   + + G+  +A  +  +M  +G+ PN  TC  +I G CK   + +A    +
Sbjct: 121 VVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 180

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M +  + PN   +N LI G++          +L  M      P+V+TY+ +++    +G
Sbjct: 181 QMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSG 240

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE-------------------------- 401
           F  + +EIF+ M ++G KPDA  Y  L  GY  E                          
Sbjct: 241 FHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFS 300

Query: 402 ---------QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
                       ++A    + M + GF P++V +TT+I G C  G +D A+  F +M + 
Sbjct: 301 IEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDD 360

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G+SPN+ TF TL+ G+S   +  +AEE+   M   G+ P  + F  + +     G   EA
Sbjct: 361 GLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEA 420

Query: 513 KRIL 516
           +++ 
Sbjct: 421 QKLF 424



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 104/452 (23%), Positives = 200/452 (44%), Gaps = 37/452 (8%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD- 163
           P + T+  L++        N   + + Q+ + G+  D++ F  ++          +AM+ 
Sbjct: 11  PDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMNI 70

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG-NVKPNLRTYNVLVRA 222
              +M E G TP   +Y+TL+KG     K EE+ +L+ +M+ +G N  P++ +Y+ ++  
Sbjct: 71  VLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHG 130

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
           +  E ++ +A+ +  KM   G+ P+VVT N++     +    D+AE V+ +M    + PN
Sbjct: 131 FFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPN 190

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   +I GY   G+  EA+R  + M   G  PN+V +N+LI    +        E+  
Sbjct: 191 CTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFN 250

Query: 343 LMKEFRVNPDVITYSTIMNAWST-----------------------------------AG 367
            M +    PD  TY ++++ ++T                                    G
Sbjct: 251 SMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCG 310

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +D+    F  M + G  PD   Y+ +  G  +    + A      MI+ G  PN++ FT
Sbjct: 311 RLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFT 370

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T+I G+   G  ++A E+F +M + G+ P++  F  ++    +  +   A+++  +M   
Sbjct: 371 TLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRA 430

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           G  P   ++  +       G   E  ++L  +
Sbjct: 431 GAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM 462



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 149/312 (47%), Gaps = 18/312 (5%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L + G   EA+ IFN++I+ G KP   TY +LL     +     ++++  
Sbjct: 226 VVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKD 285

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +NGM  +   F+  I A+ + G ++EA  TF KM++ G  P   TY T+I G    G
Sbjct: 286 LMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIG 345

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + ++++     M  +G + PN+ T+  L+  +       +A  + ++M   G+ PDV  +
Sbjct: 346 RLDDAMSRFCQMIDDG-LSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTIF 404

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     + G+  +A+++   M   G +PN  +   +I GY   G++ E ++    M  
Sbjct: 405 TAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLL 464

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P  V FN L+ G V +                 + PDV T  T++++    G ++ 
Sbjct: 465 IGLKPTAVTFNTLLDGMVSM----------------GLKPDVDTCKTLIDSCCEDGRIED 508

Query: 372 CKEIFDDM-GKA 382
              +F +M GKA
Sbjct: 509 ILTLFREMLGKA 520



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 77/323 (23%), Positives = 142/323 (43%), Gaps = 5/323 (1%)

Query: 203 MSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA-TAYA 259
           M+R G   V P++ T+ +L+   C+   +   +  + ++  +G++ D V +  +  T  A
Sbjct: 1   MARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCA 60

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG--VHPN 317
           +   +D    V+  M   G  P+  +   ++ G C E K +EA      M E G    P+
Sbjct: 61  KKRTSDAMNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPD 120

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V ++ +I GF +  D      +   M +  + P+V+T +++++       MDK + +  
Sbjct: 121 VVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQ 180

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M    I P+   Y+ L  GY+   +  +A  +L  M   G  PNVV +  +I   C  G
Sbjct: 181 QMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSG 240

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
               A E+F+ M + G  P+  T+ +L+ GY+          +  +M   G+     TF 
Sbjct: 241 FHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFS 300

Query: 498 LLAEARRATGLTKEAKRILSKIK 520
           +   A    G   EA     K++
Sbjct: 301 IEIYAYCKCGRLDEASLTFIKMQ 323



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 96/199 (48%), Gaps = 18/199 (9%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T +++ L + G+  +A + F  +I+ G  P+++T+TTL+   ++  ++     +  
Sbjct: 331 IVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFY 390

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G+ PD   F A+I+   + G + EA   F  M  +G  P   +YNT+I GY IAG
Sbjct: 391 EMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAG 450

Query: 192 KPEESVKLLDLMSREG------------------NVKPNLRTYNVLVRAWCNEKNITEAW 233
           +  E +KLLD M   G                   +KP++ T   L+ + C +  I +  
Sbjct: 451 EVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVDTCKTLIDSCCEDGRIEDIL 510

Query: 234 NVMHKMAASGMKPDVVTYN 252
            +  +M     K D +T N
Sbjct: 511 TLFREMLGKADKTDTITEN 529


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 218/445 (48%), Gaps = 2/445 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T LM     R +   A  +F   ++ G  P+ V Y  L+            + +  Q+  
Sbjct: 301 TTLMRGYCLRQEVGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTG 360

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ P +   + V+         ++A+  F +M +SGL P   TYN LI  +  A K  E
Sbjct: 361 QGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLRE 419

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++ L D M + G VKP++ TYN L+  +C +  + EA  +  +M   G KP+VVTY T+ 
Sbjct: 420 ALNLFDRMKKAG-VKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLM 478

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             Y    + D A  ++ EM+ NGV  N  T  ++I+G C   ++ E     ++    G  
Sbjct: 479 RGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFI 538

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P ++ +N +I GFV+         V   M+E  + P++ITY++ ++ +   G  D   ++
Sbjct: 539 PTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKM 598

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            +D+ + G++PD  AY+ L  G+ +E     A +LL+ +++ G  PN V++ ++I+G+ +
Sbjct: 599 LNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKN 658

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              M    + ++ M + G+  +  T+ TL+ G+S+      A E+   M A G  P   T
Sbjct: 659 LNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFT 718

Query: 496 FLLLAEARRATGLTKEAKRILSKIK 520
           F  L      +G    AK++L +++
Sbjct: 719 FTALTHGLCRSGDIDGAKKLLEEMR 743



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 222/455 (48%), Gaps = 11/455 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T R+M   ++ L++ G+ +EA  + + + + G K  ++  TTL+    +++   +  ++ 
Sbjct: 264 TYRTM---VDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLF 320

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +  ++G+ P  + +  +I    + G  ++A +   +M   GL P+T   + ++KG    
Sbjct: 321 KETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLND 380

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + +++V L + M+  G   P++ TYN L+   C    + EA N+  +M  +G+KP + T
Sbjct: 381 RRWKDAVCLFEEMADSG--LPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINT 438

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++   Y + G  D+A ++  EM   G +PN  T   ++ GY  +     A      MK
Sbjct: 439 YNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMK 498

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAG 367
           + GV  N   +N+LI G   +   D V EV  ++K F      P ++TY++I+N +  AG
Sbjct: 499 QNGVSCNDYTYNVLINGICMV---DRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAG 555

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            M     ++  M + G+ P+   Y+    GY R    + A ++L  +   G  P++V + 
Sbjct: 556 MMGSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYN 615

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +I+G+C +G+M  A+++   + + G++PN   + +L+ GY          +  + M   
Sbjct: 616 ALINGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKG 675

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G+    ST+  L +     G    A  + S++  K
Sbjct: 676 GIVADTSTYTTLIDGFSKDGNVAFALELYSEMMAK 710



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 116/468 (24%), Positives = 213/468 (45%), Gaps = 42/468 (8%)

Query: 76  TKLMNSLIERG-----KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TK+M  ++ RG       Q+A  +   +   G  PS    + +L  L   +R+     + 
Sbjct: 331 TKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLF 390

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ ++G+ PD   +N +I+   ++  + EA++ F +MK++G+ P+ +TYN+L+ GY   
Sbjct: 391 EEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKK 449

Query: 191 GKPEESVKLLDLMSREGNVKPNL-----------------------------------RT 215
           G  +E+VKL   M  EG  KPN+                                    T
Sbjct: 450 GCMDEAVKLYSEMPMEG-FKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYT 508

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           YNVL+   C    + E   ++    + G  P ++TYN+I   + + G    A  V  +M 
Sbjct: 509 YNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMR 568

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
             G+ PN  T    I GYC+ G    AL+    ++  G+ P++V +N LI GF +  +  
Sbjct: 569 EKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMS 628

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
              ++L ++ +  + P+ + Y++++  +     M +  + ++ M K GI  D   Y+ L 
Sbjct: 629 HALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLI 688

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G+ ++     A EL   M+  G+ P+   FT +  G C  G +D A ++ ++M    V 
Sbjct: 689 DGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVR 748

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           PN+  +  L+ GY    +   A  +   M   G+ P  +T+ +L   +
Sbjct: 749 PNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKK 796



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 107/437 (24%), Positives = 193/437 (44%), Gaps = 6/437 (1%)

Query: 88  PQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNA 147
           P  A   + +++  G  P + + T LL             ++  ++   G   D+  F+A
Sbjct: 138 PSAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMFDA 197

Query: 148 VINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
           +++A  + G  E+A+  F +M  + + P    Y   I      G    ++++L  M   G
Sbjct: 198 LMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVG 257

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
               +  TY  +V        + EA  V  +M  +G K DV+   T+   Y    E   A
Sbjct: 258 FDTCDF-TYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNA 316

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
             +  E   +G+ P     G++I G  + G  ++A    R M   G+ P+    +L++KG
Sbjct: 317 LNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKG 376

Query: 328 FVEIMDRDGVDEVLALMKEFRVN--PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            +   DR   D V  L +E   +  PDV TY+ +++    A  + +   +FD M KAG+K
Sbjct: 377 LLN--DRRWKDAV-CLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVK 433

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P  + Y+ L  GY ++   ++A +L   M   GF PNVV + T++ G+ +    D A  +
Sbjct: 434 PSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYAL 493

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
            D+M ++GVS N  T+  L+ G     +    + +L+   + G  P   T+  +      
Sbjct: 494 LDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVK 553

Query: 506 TGLTKEAKRILSKIKNK 522
            G+   A  +  +++ K
Sbjct: 554 AGMMGSAFTVYQQMREK 570


>gi|115482710|ref|NP_001064948.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|22128714|gb|AAM92826.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
 gi|31432837|gb|AAP54424.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639557|dbj|BAF26862.1| Os10g0495100 [Oryza sativa Japonica Group]
 gi|125575261|gb|EAZ16545.1| hypothetical protein OsJ_32018 [Oryza sativa Japonica Group]
          Length = 461

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 208/416 (50%), Gaps = 6/416 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHK---PSLVTYTTLLAALTIQKRFNSIH 127
           T+  + + ++  + R  P  A + +N +   G     P+L TY+ L+       R +   
Sbjct: 46  TIYGLNRALDD-VARHSPAAAVSRYNRMARAGADEVTPNLYTYSVLIGCCCRAGRLDLGF 104

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD-TFWKMKESGLTPTTSTYNTLIKG 186
           + +  V + G   ++I F  ++          +AMD    +M + G  P   +   L+KG
Sbjct: 105 AALGNVIKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLCRMTQLGCIPNVFSCTILLKG 164

Query: 187 YGIAGKPEESVKLLDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
                + +E+++LL +M  +G +  P++  YN ++  +  E +  +A+   H+M   G+ 
Sbjct: 165 LCDENRSQEALELLQMMPDDGGDCPPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGIL 224

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PDVVTY++I  A  +    D+A EV+  M  NGV PN RT   I+ GYC  G++ EA+ F
Sbjct: 225 PDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGF 284

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
            + M   GV P++V  NLL+    +        ++   M +  + PD+ TY T++  ++T
Sbjct: 285 LKMMCSDGVEPDVVTCNLLMDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCTLLQGYAT 344

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G + +  ++ D M   GI+P+ H ++IL   Y ++++ ++A  +   M + G  PN V 
Sbjct: 345 KGALVEMHDLLDLMVWNGIQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQGLSPNAVN 404

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           + T+I   C  G +  A+    +M   G++P++  +  L+ G+    +  +AEE++
Sbjct: 405 YRTVIDVLCKLGRVYDAVLTLKQMINEGLTPDIIVYTPLIHGFCTCDKWEKAEELI 460



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 157/335 (46%), Gaps = 5/335 (1%)

Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V   + M+R G   V PNL TY+VL+   C    +   +  +  +   G + + +T
Sbjct: 62  PAAAVSRYNRMARAGADEVTPNLYTYSVLIGCCCRAGRLDLGFAALGNVIKKGFRVEAIT 121

Query: 251 YNTIATAY-AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +     A    +D  + V+  M   G  PN  +C I++ G C E + +EAL   + M
Sbjct: 122 FTPLLKGLCADKRTSDAMDIVLCRMTQLGCIPNVFSCTILLKGLCDENRSQEALELLQMM 181

Query: 310 KEYG--VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            + G    P++V++N +I GF +  D D        M +  + PDV+TYS+I+ A   A 
Sbjct: 182 PDDGGDCPPDVVLYNTVINGFFKEGDPDKAYATYHEMFDQGILPDVVTYSSIIAALCKAQ 241

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            MDK  E+ + M K G+ P+   Y+ +  GY    +  +A   L  M   G  P+VV   
Sbjct: 242 AMDKAMEVLNTMVKNGVMPNCRTYNSIVHGYCSSGQLTEAIGFLKMMCSDGVEPDVVTCN 301

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            ++   C +     A ++F+ M + G+ P++ T+ TL+ GY+         ++L +M   
Sbjct: 302 LLMDYLCKNRRCTEARKIFNSMTKCGLKPDITTYCTLLQGYATKGALVEMHDLLDLMVWN 361

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G+ P    F +L  A        EA  + SK++ +
Sbjct: 362 GIQPNHHVFNILICAYAKQEKVDEAMLVFSKMRQQ 396


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 210/432 (48%), Gaps = 24/432 (5%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +  KL+  L    +  +A A+F  +I+   +P   T+  LL  L    +      ++ 
Sbjct: 7   VFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLG 66

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++E G  PD   +NA+I+ +S++ +  +A     +M ++   PT  TY  ++ G   A 
Sbjct: 67  RMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAE 126

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  ++VKLLD M R+    PN+ TYNV+V   C E+ + EA  ++ +MA  G  PDVVTY
Sbjct: 127 RTRDAVKLLDEM-RDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTY 185

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N+      +    D+A + +  M    V P+  +   +I+G CK G +  A R    M  
Sbjct: 186 NSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSN 242

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P++V ++ LI GF +  + +    +L  M +    P+++ Y++++ A    G + K
Sbjct: 243 RGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGK 302

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN--------- 422
            +++  +M + G  PD  +Y+    G  + +  +KA+ +   M+E G  PN         
Sbjct: 303 AEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIV 362

Query: 423 -VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS-PNLKTFETLMWGYSEARQPWRAEEI 480
            ++++T ++ G C  G  D A  +F K+ +  +  P++  +  ++  + + R        
Sbjct: 363 DILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR-------- 414

Query: 481 LQIMKAFGVHPQ 492
            QI KA  +H Q
Sbjct: 415 -QIDKALQIHKQ 425



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 178/364 (48%), Gaps = 4/364 (1%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G++ ++ TY  LL  LT + R +   ++  ++ +    PD+  F  ++     S  +E+A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
                +MKE G  P  + YN LI GY  A    ++ K L  M +  +  P + TY  +V 
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVK-NHCLPTVVTYTNIVD 120

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C  +   +A  ++ +M   G  P++ TYN I     +  + D+A++++ EM   G  P
Sbjct: 121 GLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFP 180

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T    I G CK  ++ EA +F   M    V P++V +  +I G  +  D D    +L
Sbjct: 181 DVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTTVINGLCKSGDLDSASRML 237

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M      PDV+TYS++++ +   G +++   + D M K G +P+  AY+ L     R 
Sbjct: 238 DHMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRL 297

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
               KAE++L+ M   GF P+VV +   I G C    + +A  VFD+M E G +PN  ++
Sbjct: 298 GHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSY 357

Query: 462 ETLM 465
             L+
Sbjct: 358 SMLI 361



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 204/416 (49%), Gaps = 17/416 (4%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C  TV + T +++ L +  + ++A  + + + + G  P++ TY  ++  L  +++
Sbjct: 103 MVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERK 162

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    ++ ++   G  PD + +N+ I    +   ++EA     +M    +TP   +Y T
Sbjct: 163 LDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTT 219

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G   +G  + + ++LD MS  G   P++ TY+ L+  +C    +  A  ++  M   
Sbjct: 220 VINGLCKSGDLDSASRMLDHMSNRG-CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKL 278

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G +P++V YN++  A  + G   +AE+++VEME  G  P+  +    I G CK  ++K+A
Sbjct: 279 GCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKA 338

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKG-FVEIMDRDGV------DEVLAL----MKEFRVNP 351
                 M E G  PN   +++LI    +  +  DG+      DE  AL    + E    P
Sbjct: 339 KAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEP 398

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           DV  Y+ ++++      +DK  +I   M +     +   ++IL  G   +     AE +L
Sbjct: 399 DVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNC-CNVVTWNILVHGLCVDDRLSDAETML 457

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           +TM++ GF P+ V + T++   C  G    A+E+F++  + G  P++ T+  L+ G
Sbjct: 458 LTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITG 513



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 188/416 (45%), Gaps = 20/416 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L E  K  EA+ +   +   G+ P +VTY + +  L    R +     ++++    
Sbjct: 153 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP--- 209

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +  VIN   +SG+++ A      M   G TP   TY++LI G+   G+ E ++
Sbjct: 210 VTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERAM 269

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LLD M + G  +PN+  YN L+ A     +I +A +++ +M   G  PDVV+YN     
Sbjct: 270 GLLDSMLKLG-CRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 328

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII----------SGYCKEGKIKEALR-FA 306
             +     +A+ V   M   G  PN  +  ++I           G CK G+  EA   F+
Sbjct: 329 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACALFS 388

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF--RVNPDVITYSTIMNAWS 364
           + + E    P++  +N+++    +   R  +D+ L + K+   +   +V+T++ +++   
Sbjct: 389 KVLDEKICEPDVFFYNVMLDSHCK---RRQIDKALQIHKQMLEKNCCNVVTWNILVHGLC 445

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
               +   + +   M   G  PD   Y  L     +  +   A EL    ++ G  P+VV
Sbjct: 446 VDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVV 505

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
            ++ +I+G   +   + A  +F K+ E    P+ KT   L        +P +AE +
Sbjct: 506 TYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKLKLLNKPRKAEVV 561



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/317 (23%), Positives = 155/317 (48%), Gaps = 9/317 (2%)

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           + + +P+  T+ +L+R  C    + +A  ++ +M   G  PD   YN + + Y++  +  
Sbjct: 35  DKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMGCVPDDAIYNALISGYSKAKDFG 94

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           QA + + EM  N   P   T   I+ G CK  + ++A++    M++ G  PN+  +N+++
Sbjct: 95  QAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIV 154

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +G  E      +DE   +++E  V    PDV+TY++ +        +D+ ++    + + 
Sbjct: 155 EGLCE---ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARM 208

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
            + PD  +Y+ +  G  +  + + A  +L  M   G  P+VV ++++I G+C  G ++RA
Sbjct: 209 PVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEVERA 268

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           + + D M + G  PN+  + +L+          +AE++L  M+  G  P   ++    + 
Sbjct: 269 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 328

Query: 503 RRATGLTKEAKRILSKI 519
                  K+AK +  ++
Sbjct: 329 LCKAERVKKAKAVFDRM 345



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 142/312 (45%), Gaps = 32/312 (10%)

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G + +V TYN +     +    D+A  V  EM     QP+  T  I++ G C+  ++++A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
            +    MKE G  P+  I+N LI G+ +  D     + LA M +    P V+TY+ I++ 
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              A       ++ D+M   G  P+ + Y+++ +G   E++ ++A+++L  M   G+ P+
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 423 VVI--------------------------------FTTIISGWCSDGSMDRAIEVFDKMC 450
           VV                                 +TT+I+G C  G +D A  + D M 
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMS 241

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
             G +P++ T+ +L+ G+ +  +  RA  +L  M   G  P    +  L  A    G   
Sbjct: 242 NRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIG 301

Query: 511 EAKRILSKIKNK 522
           +A+ +L +++ +
Sbjct: 302 KAEDMLVEMERR 313



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 128/269 (47%), Gaps = 11/269 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++   + G+ + A  + +++++ G +P++V Y +LL AL           ++ 
Sbjct: 249 VVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLV 308

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI------- 184
           ++E  G  PD + +NA I+   ++  +++A   F +M E G TP  S+Y+ LI       
Sbjct: 309 EMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYT 368

Query: 185 ---KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
               G    G+ +E+  L   +  E   +P++  YNV++ + C  + I +A  + HK   
Sbjct: 369 VLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQI-HKQML 427

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
                +VVT+N +      +     AE +++ M   G  P+  T G ++   CK GK   
Sbjct: 428 EKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAA 487

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           AL       + G  P++V ++ LI G V 
Sbjct: 488 ALELFEEAVKGGCVPDVVTYSALITGLVH 516



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/229 (24%), Positives = 108/229 (47%), Gaps = 13/229 (5%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPS----------LVTYTTLLAALTIQK 121
           V S    ++ L +  + ++A+A+F+ ++E G  P+          ++ YT LL  L    
Sbjct: 319 VVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGG 378

Query: 122 RFNSIHSIMSQV-EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
           RF+   ++ S+V +E   +PD  F+N ++++  +   +++A+    +M E        T+
Sbjct: 379 RFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC-NVVTW 437

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           N L+ G  +  +  ++  +L  M  EG + P+  TY  LV A C       A  +  +  
Sbjct: 438 NILVHGLCVDDRLSDAETMLLTMVDEGFI-PDFVTYGTLVDAMCKCGKSAAALELFEEAV 496

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
             G  PDVVTY+ + T       A++A  +  ++      P+ +T G++
Sbjct: 497 KGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLL 545



 Score = 48.9 bits (115), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 69/157 (43%), Gaps = 3/157 (1%)

Query: 46  YSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKP 105
           +   +  D   Q H    M +++C  V +   L++ L    +  +A+ +   +++ G  P
Sbjct: 410 HCKRRQIDKALQIHKQ--MLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIP 467

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
             VTY TL+ A+    +  +   +  +  + G  PD + ++A+I         EEA   F
Sbjct: 468 DFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLF 527

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
            K+ E    P   T   L +   +  KP ++ +++DL
Sbjct: 528 TKLVERRWVPDDKTLGLLHRKLKLLNKPRKA-EVVDL 563


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 223/465 (47%), Gaps = 17/465 (3%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   +++ L++ G+ +EA  I + L+  G K S+V  TTL+    +Q+       I  + 
Sbjct: 249 TFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEET 308

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G+ P  + +  +I   +E G  E+A +   +M++ GL P+T+ +N +IKG       
Sbjct: 309 LRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLW 368

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +++V L   M+  G   P+  TYN+L+   C  + I EA N+  KM  +G+KP +VTY++
Sbjct: 369 KDAVSLFKEMADSG--IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHS 426

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y  NG  D+A ++  EM   G  PN  T   ++ G+  +    +A      MK+ G
Sbjct: 427 LLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNG 486

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMD 370
           V  N   +N LI G   +     V EV  ++K F      P  +TY++I+N +  AG M 
Sbjct: 487 VSCNDYTYNTLINGLCVV---GRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMG 543

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               ++  M   GI P+   Y+    GY +    + A ++L  +   G  P++  + ++I
Sbjct: 544 SAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLI 603

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+C +G+M  A++V   M + G+ PN+  + + + GY   +    A    + M   G+ 
Sbjct: 604 YGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGID 663

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP 535
              +T+  L +     G    A ++ S         EM A+ +IP
Sbjct: 664 LDTATYTTLIDGFSKDGNVTFALKLYS---------EMVAKGNIP 699



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 197/389 (50%), Gaps = 3/389 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L +R K +EA  ++  + E G KP +VTY +LL    +    +    + +++   G
Sbjct: 392 LIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKG 451

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + +  ++         ++A     +MK++G++    TYNTLI G  + G+  E  
Sbjct: 452 FTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVG 511

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L     EG V P   TYN ++  +     +  A+ V  +M A G+ P++VTY +    
Sbjct: 512 EMLKRFETEGFV-PTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDG 570

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y +    D A +++ ++   G++P+      +I G+C+EG +  AL+    M + G+ PN
Sbjct: 571 YCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPN 630

Query: 318 LVIFNLLIKGFVEI-MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           + ++N  I G+  + M  + +     ++KE  ++ D  TY+T+++ +S  G +    +++
Sbjct: 631 ISVYNSFITGYKNLKMMEEALRFYEKMIKE-GIDLDTATYTTLIDGFSKDGNVTFALKLY 689

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M   G  PD   ++ L  G  R  + + A +LL  M      PNV+++  +I+G+  +
Sbjct: 690 SEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRN 749

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           G +  A  + D+M E  + P+  T++ L+
Sbjct: 750 GKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 194/412 (47%), Gaps = 2/412 (0%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           ++A ++F  + + G  P   TY  L+  L  +++     ++  ++ E G+ P  + ++++
Sbjct: 369 KDAVSLFKEMADSG-IPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSL 427

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           +  +  +G M+EA+  + +M   G TP   TY TL+KG+      +++  LL  M + G 
Sbjct: 428 LLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNG- 486

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V  N  TYN L+   C    + E   ++ +    G  P  +TYN+I   + + G    A 
Sbjct: 487 VSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAF 546

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            V  +M   G+ PN  T    I GYCK      AL+    ++  G+ P++  +N LI GF
Sbjct: 547 AVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGF 606

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +  +     +VL LM +  + P++  Y++ +  +     M++    ++ M K GI  D 
Sbjct: 607 CQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDT 666

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y+ L  G+ ++     A +L   M+  G  P+ + FT +  G C +G +D A ++ D+
Sbjct: 667 ATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDE 726

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
           M    + PN+  +  L+ GY    +   A  +   M    + P  +T+ +L 
Sbjct: 727 MNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILV 778



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/324 (25%), Positives = 154/324 (47%), Gaps = 1/324 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T LM   I +    +A A+   + + G   +  TY TL+  L +  R   +  ++ 
Sbjct: 456 VVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLK 515

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           + E  G  P ++ +N++IN F ++G M  A   + +M   G+ P   TY + I GY    
Sbjct: 516 RFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTS 575

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + ++K+L+ +  +G ++P++  YN L+  +C E N++ A  V+  M   G+ P++  Y
Sbjct: 576 CCDLALKMLNDVRCKG-LRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVY 634

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N+  T Y      ++A     +M   G+  +  T   +I G+ K+G +  AL+    M  
Sbjct: 635 NSFITGYKNLKMMEEALRFYEKMIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVA 694

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P+ + F  L  G     D D   ++L  M    + P+V+ Y+ ++N +   G + +
Sbjct: 695 KGNIPDHITFTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQE 754

Query: 372 CKEIFDDMGKAGIKPDAHAYSILA 395
              + D+M +  I PD   Y IL 
Sbjct: 755 AFRLHDEMLERKIMPDDTTYDILV 778



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/424 (21%), Positives = 195/424 (45%), Gaps = 8/424 (1%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           GH      +  ++ A   +  ++    +  ++  + ++PD    +  I +  +  +   A
Sbjct: 172 GHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRA 231

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           +    KM+++G  P   T+N+++      G+ EE++ + D +   G  K ++     L+ 
Sbjct: 232 LLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGK-KMSVVLATTLMH 290

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
            +C ++ + +A ++  +    G+ P  VTY  +     + G  ++A E+  +M  +G+ P
Sbjct: 291 GYCLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLP 350

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +     ++I G   +   K+A+   + M + G+ P+   +N+LI    +   R  + E L
Sbjct: 351 STNEFNMVIKGLLNDKLWKDAVSLFKEMADSGI-PDAFTYNILIHWLCQ---RRKIREAL 406

Query: 342 AL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            L   M E  V P ++TY +++  +   G MD+  +++ +M   G  P+   Y+ L KG+
Sbjct: 407 NLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGH 466

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           + +   +KA  LL  M ++G   N   + T+I+G C  G +    E+  +    G  P  
Sbjct: 467 INKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTA 526

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+ +++ G+ +A     A  + Q M A G+ P   T+    +    T     A ++L+ 
Sbjct: 527 MTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLND 586

Query: 519 IKNK 522
           ++ K
Sbjct: 587 VRCK 590



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 128/255 (50%), Gaps = 1/255 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  +   ++N  I+ G    A A++  +   G  P++VTYT+ +         +    ++
Sbjct: 525 TAMTYNSIINGFIKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKML 584

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + V   G+ PD   +N++I  F + GNM  A+     M + GL P  S YN+ I GY   
Sbjct: 585 NDVRCKGLRPDIAAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNL 644

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              EE+++  + M +EG +  +  TY  L+  +  + N+T A  +  +M A G  PD +T
Sbjct: 645 KMMEEALRFYEKMIKEG-IDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHIT 703

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +  +     +NG+ D A +++ EM    ++PN     ++I+GY + GK++EA R    M 
Sbjct: 704 FTALTHGLCRNGDIDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEML 763

Query: 311 EYGVHPNLVIFNLLI 325
           E  + P+   +++L+
Sbjct: 764 ERKIMPDDTTYDILV 778


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 117/419 (27%), Positives = 203/419 (48%), Gaps = 1/419 (0%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           ++A   FN++I     P +V +  LL+AL   K + ++ S+  ++E   ++ D   FN +
Sbjct: 66  EDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNIL 125

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           IN FS    ++ A     K+ + G  P   T+++LI G     K   +++  D M   G 
Sbjct: 126 INCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG- 184

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            +PNL TYN +++ +C     T A  ++ KM  +G +PD+V YNTI     ++    +A 
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEAL 244

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           ++  E++  GV+P+  T  I++ G C   + +EA      M    + P++V FN+L+   
Sbjct: 245 DIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKL 304

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +         ++ +M E  V P+  TY+++MN +     + + + +FD M   G  P+ 
Sbjct: 305 CKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNV 364

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
            +Y+IL  GY + Q  ++A EL   M   G  PN   + T+ISG C  G    A E+F  
Sbjct: 365 VSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKD 424

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           M   G SP+L T   L+    +      A  + + M+   + P   T+ +L  A   +G
Sbjct: 425 MQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 173/372 (46%), Gaps = 1/372 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R V     L+N      +   A ++   +I+ G +P  VT+++L+  L  + +F      
Sbjct: 117 RDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEF 176

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++  +G  P+   +N +I  F + G    A+    KM ++G  P    YNT+I G   
Sbjct: 177 FDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCK 236

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
                E++ +   +  +G V+P++ TY++L+   CN     EA  + ++M +  + PDVV
Sbjct: 237 DRLVSEALDIFSEIKGKG-VRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVV 295

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           T+N +     + G   +A+ +I  M   GV+PN  T   +++GYC + K+ EA      M
Sbjct: 296 TFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAM 355

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G  PN+V +N+LI G+ +    D   E+   M    + P+   Y+T+++    AG  
Sbjct: 356 ITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRH 415

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            + +E+F DM   G  PD    +IL     +    + A  L   M +S   PN+V +  +
Sbjct: 416 CEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDIL 475

Query: 430 ISGWCSDGSMDR 441
           I      G + R
Sbjct: 476 IRAMYKSGKIYR 487



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 139/309 (44%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P +  ++ L+ A    K+     ++  ++    ++ DV  +N +   +++    D A  V
Sbjct: 82  PCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNILINCFSRLQRVDFAFSV 141

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + ++   G +P+  T   +I+G C E K   A+ F   M   G  PNL  +N +IKGF +
Sbjct: 142 LGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCK 201

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           I        +L  M +    PD++ Y+TI++       + +  +IF ++   G++PD   
Sbjct: 202 IGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFT 261

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YSIL  G     + E+A  L   M+     P+VV F  ++   C +G +  A  +   M 
Sbjct: 262 YSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMI 321

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E GV PN  T+ +LM GY    + + A  +   M   G  P   ++ +L           
Sbjct: 322 EKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRID 381

Query: 511 EAKRILSKI 519
           EA+ +  ++
Sbjct: 382 EARELFDEM 390



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 43/139 (30%), Positives = 71/139 (51%)

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           I+ D   ++IL   + R Q  + A  +L  +I+ GF P+ V F+++I+G C +    RA+
Sbjct: 115 IERDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAM 174

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           E FD+M   G  PNL T+ T++ G+ +  +   A  +L+ M   G  P    +  + +  
Sbjct: 175 EFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGL 234

Query: 504 RATGLTKEAKRILSKIKNK 522
               L  EA  I S+IK K
Sbjct: 235 CKDRLVSEALDIFSEIKGK 253


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 221/488 (45%), Gaps = 70/488 (14%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++S  +RGK   A      + E G K ++  Y++L++      +  +  S+  ++  NG
Sbjct: 396 LIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG 455

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ + + ++I+ + + G +  A   + +M   G++P T T+  LI G   A +  E+ 
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEAN 515

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL   M  E NV PN  TYNVL+   C E N   A+ ++ +M   G+ PD  TY  + + 
Sbjct: 516 KLFGEMV-EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISG 574

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G   +A E + +++    + N      ++ GYCKEG++ +AL   R M   GV  +
Sbjct: 575 LCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMD 634

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD------------------------- 352
           LV +++LI G +   DR  + ++L  M +  + PD                         
Sbjct: 635 LVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWD 694

Query: 353 ----------VITYSTIMNAWSTAGFMDK----CKEIF---------------------- 376
                     V+TY+ ++N     G MDK    C+E+                       
Sbjct: 695 IMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEG 754

Query: 377 --------DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
                    D+   G   +   Y+IL +G+ +    ++A E+L+ MI+SG  P+ + ++T
Sbjct: 755 NIEKAIQLHDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYST 814

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           II  +C  G +  AI++++ M   GV+P+   +  L++G     +  +A E+   M   G
Sbjct: 815 IIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRG 874

Query: 489 VHPQKSTF 496
           V P ++T+
Sbjct: 875 VKPNRATY 882



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 212/452 (46%), Gaps = 2/452 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ + ++  +  +   +   +++ G  P + T + +L  L   ++F     +  ++  +G
Sbjct: 151 LIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSG 210

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   + AV+ +  E  +   A +   +M+ SG   + +TYN  I+G     +  E+V
Sbjct: 211 LRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAV 270

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++ +L+S +G ++ ++ TY  LV   C  +       +M++M   G  P     + +   
Sbjct: 271 EIKNLLSYKG-LRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G    A +++ +++  GV P+      +I+  CK+GK+ EA      M   G+ PN
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +++LI  F +    D     L  M E  +   V  YS++++     G +   K +FD
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFD 449

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G+KP+   Y+ L  GY +E E   A  L   M   G  PN   FT +ISG C   
Sbjct: 450 EMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHAN 509

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M  A ++F +M E  V PN  T+  L+ G+ +     RA E+L  M   G+ P   T+ 
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYR 569

Query: 498 LLAEARRATGLTKEAKRILSKIKN-KERTNEM 528
            L     +TG   EA+  ++ ++  +++ NEM
Sbjct: 570 PLISGLCSTGRVSEAREFMNDLQGEQQKLNEM 601



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 208/442 (47%), Gaps = 1/442 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +    +  L +  +  EA  I N L   G +  + TY TL+  L   + F +   +M
Sbjct: 249 SVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMM 308

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++ E G  P     + +++   + GN+  A D   K+K+ G+ P+   YN LI      
Sbjct: 309 NEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKD 368

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK +E+  L + M  +G + PN  TY++L+ ++C    +  A + + KM   G+K  V  
Sbjct: 369 GKLDEAESLFNNMGHKG-LFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYP 427

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+++ + + + G+   A+ +  EM  NG++PN      +ISGYCKEG++  A R    M 
Sbjct: 428 YSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMT 487

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ PN   F  LI G          +++   M E+ V P+ +TY+ ++      G   
Sbjct: 488 GKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTV 547

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  E+ D+M + G+ PD + Y  L  G        +A E +  +       N + F+ ++
Sbjct: 548 RAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALL 607

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+C +G +D A++   +M   GV+ +L  +  L++G    +      ++L+ M   G+ 
Sbjct: 608 HGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLR 667

Query: 491 PQKSTFLLLAEARRATGLTKEA 512
           P    +  + +A    G  K A
Sbjct: 668 PDNVLYTTMIDANAKAGNLKMA 689



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 204/468 (43%), Gaps = 74/468 (15%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV   + L++   + GK + A+++F+ +I  G KP++V YT+L++    +   ++   + 
Sbjct: 424 TVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLY 483

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+ P++  F A+I+    +  M EA   F +M E  + P   TYN LI+G+   
Sbjct: 484 HEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKE 543

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    + +LLD M  +G V P+  TY  L+   C+   ++EA   M+ +     K + + 
Sbjct: 544 GNTVRAFELLDEMVEKGLV-PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMC 602

Query: 251 YNTIATAYAQNGEADQAEE-----------------------------------VIVEME 275
           ++ +   Y + G  D A +                                   ++ +M 
Sbjct: 603 FSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMH 662

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI--MD 333
             G++P+      +I    K G +K A      M   G  PN+V +  LI G  +I  MD
Sbjct: 663 DQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMD 722

Query: 334 RDGV--DEVLA--------------------------------LMKEFRVNPDVITYSTI 359
           +  +   E+LA                                L++ F  N   +TY+ +
Sbjct: 723 KAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLAN--TVTYNIL 780

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +  +   G + +  E+  +M  +GI PD  +YS +   Y R  + ++A +L  +M+  G 
Sbjct: 781 IRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGV 840

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           +P+ V +  +I G C  G + +A E+ D M   GV PN  T+ +L+ G
Sbjct: 841 NPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 888



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 171/361 (47%), Gaps = 10/361 (2%)

Query: 80  NSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           N LIE     G    A  + + ++E G  P   TY  L++ L    R +     M+ ++ 
Sbjct: 534 NVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQG 593

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
                + + F+A+++ + + G +++A+D   +M   G+      Y+ LI  YGI  + + 
Sbjct: 594 EQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLI--YGILRQQDR 651

Query: 196 S--VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
              + LL  M  +G ++P+   Y  ++ A     N+  A+ +   M + G  P+VVTY  
Sbjct: 652 RSIIDLLKQMHDQG-LRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTA 710

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G  D+AE +  EM  +   PN  T    +     EG I++A++    + E G
Sbjct: 711 LINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-G 769

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              N V +N+LI+GF ++       EVL  M +  ++PD I+YSTI+  +   G + +  
Sbjct: 770 FLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAI 829

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           ++++ M   G+ PD  AY+ L  G     E  KA EL   M+  G  PN   + ++I G 
Sbjct: 830 KLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGT 889

Query: 434 C 434
           C
Sbjct: 890 C 890


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 224/480 (46%), Gaps = 38/480 (7%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L+N     G+  EA A+ + ++E   +P LVT +TL+  L ++ R +    ++ ++
Sbjct: 171 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 230

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE----------------------- 170
            E G  PD + +  V+N   +SGN   A+D F KM+E                       
Sbjct: 231 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 290

Query: 171 ------------SGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYN 217
                        G+     TY++LI G    GK ++  K+L +++ R  N+ P++ T++
Sbjct: 291 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR--NIIPDVVTFS 348

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            L+  +  E  + EA  + ++M   G+ PD +TYN++   + +     +A ++   M   
Sbjct: 349 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 408

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G +P+  T  I+I+ YCK  ++ + +R  R +   G+ PN + +N L+ GF +    +  
Sbjct: 409 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 468

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E+   M    V P V+TY  +++     G ++K  EIF+ M K+ +      Y+I+  G
Sbjct: 469 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 528

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
                + + A  L  ++ + G  P+VV +  +I G C  GS+  A  +F KM E G +P+
Sbjct: 529 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 588

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
             T+  L+  +        + E+++ MK  G     ST  ++ +      L K    +LS
Sbjct: 589 DFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDMLS 648



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 226/449 (50%), Gaps = 2/449 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           +L N +++  K  +A  +F ++I+    P+ + +  L +A+   K+++ +      +E N
Sbjct: 70  RLRNGIVDI-KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 128

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G++ D      +IN +     +  A     +  + G  P T T++TL+ G+ + G+  E+
Sbjct: 129 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 188

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           V L+D M  E   +P+L T + L+   C +  ++EA  ++ +M   G +PD VTY  +  
Sbjct: 189 VALVDRMV-EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 247

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              ++G +  A ++  +ME   ++ +     I+I   CK+G   +AL     M+  G+  
Sbjct: 248 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 307

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++V ++ LI G       D   ++L  M    + PDV+T+S +++ +   G + + KE++
Sbjct: 308 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 367

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M   GI PD   Y+ L  G+ +E    +A ++   M+  G  P++V ++ +I+ +C  
Sbjct: 368 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 427

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             +D  + +F ++   G+ PN  T+ TL+ G+ ++ +   A+E+ Q M + GV P   T+
Sbjct: 428 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 487

Query: 497 LLLAEARRATGLTKEAKRILSKIKNKERT 525
            +L +     G   +A  I  K++    T
Sbjct: 488 GILLDGLCDNGELNKALEIFEKMQKSRMT 516



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 130/256 (50%), Gaps = 1/256 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++  ++ GK  EA+ ++N +I  G  P  +TY +L+     +   +  + +  
Sbjct: 344 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 403

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G +PD + ++ +IN++ ++  +++ M  F ++   GL P T TYNTL+ G+  +G
Sbjct: 404 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 463

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K   + +L   M   G V P++ TY +L+   C+   + +A  +  KM  S M   +  Y
Sbjct: 464 KLNAAKELFQEMVSRG-VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 522

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N I        + D A  +   +   GV+P+  T  ++I G CK+G + EA    R MKE
Sbjct: 523 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 582

Query: 312 YGVHPNLVIFNLLIKG 327
            G  P+   +N+LI+ 
Sbjct: 583 DGCTPDDFTYNILIRA 598



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 148/317 (46%), Gaps = 1/317 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+  L   GK  +   +   +I     P +VT++ L+     + +      + +
Sbjct: 309 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 368

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD+I +N++I+ F +   + EA   F  M   G  P   TY+ LI  Y  A 
Sbjct: 369 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 428

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + ++ ++L   +S +G + PN  TYN LV  +C    +  A  +  +M + G+ P VVTY
Sbjct: 429 RVDDGMRLFREISSKGLI-PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 487

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +      NGE ++A E+  +M+ + +        III G C   K+ +A     ++ +
Sbjct: 488 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 547

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P++V +N++I G  +       D +   MKE    PD  TY+ ++ A      +  
Sbjct: 548 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 607

Query: 372 CKEIFDDMGKAGIKPDA 388
             E+ ++M   G   D+
Sbjct: 608 SVELIEEMKVCGFSADS 624



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 139/308 (45%), Gaps = 6/308 (1%)

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           +Y   +R    +  + +A ++   M  S   P  + +N + +A A+  + D        M
Sbjct: 66  SYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGM 125

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
           E NG++ +  T  I+I+ YC++ K+  A        + G  P+ + F+ L+ GF      
Sbjct: 126 ELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCL---E 182

Query: 335 DGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
             V E +AL   M E +  PD++T ST++N     G + +   + D M + G +PD   Y
Sbjct: 183 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 242

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
             +     +      A +L   M E     +VV ++ +I   C DGS D A+ +F++M  
Sbjct: 243 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 302

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            G+  ++ T+ +L+ G     +     ++L+ M    + P   TF  L +     G   E
Sbjct: 303 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 362

Query: 512 AKRILSKI 519
           AK + +++
Sbjct: 363 AKELYNEM 370


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 226/450 (50%), Gaps = 18/450 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L   G+  +A+ +   L   G   +++TY T++       R  +I +    ++   
Sbjct: 102 LIKKLCADGRVADAERVVEAL---GPSATIITYNTMVNGYC---RAGNIDAARRMIDSVP 155

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD+  +N +I A    G + +A+  F  M   G +P+  TY+ L+         +++V
Sbjct: 156 FAPDTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAV 215

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LLD M  +G  +P++ TYNVL+ A C++ ++ EA  V++ + + G KPD VTY  +  +
Sbjct: 216 VLLDEMRSKG-CEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKS 274

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
              +   ++A++++ +M  N   P+  T   +I+  C++G +  A +    M E+G  P+
Sbjct: 275 LCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPD 334

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN-------PDVITYSTIMNAWSTAGFMD 370
           ++ ++ ++ G  +      VDE + L+KE           PD +T++TI+ +    G  D
Sbjct: 335 IITYSSIMDGLCK---ERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFD 391

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYV-REQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +  ++ D+M + G  PD   Y+ +  G++ +  + E+A +LL  M+ +G  P+   + ++
Sbjct: 392 RAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSL 451

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             G   +  M+RAI +F ++   G+SP+   +  ++ G  +  +   A +    M + G 
Sbjct: 452 AFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGC 511

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            P +ST+++L E     G  +EAK +L  +
Sbjct: 512 MPDESTYIILVEGIAYEGFLEEAKELLGNL 541



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 197/412 (47%), Gaps = 19/412 (4%)

Query: 114 LAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL 173
           L  L  +   +    ++  +  +G DP  I  N +I      G + +A      +   G 
Sbjct: 68  LRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL---GP 124

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
           + T  TYNT++ GY  AG  + + +++D +       P+  TYN L+RA C    + +A 
Sbjct: 125 SATIITYNTMVNGYCRAGNIDAARRMIDSVP----FAPDTFTYNPLIRALCVRGCVLDAL 180

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
            V   M   G  P VVTY+ +  A  +     QA  ++ EM   G +P+  T  ++I+  
Sbjct: 181 AVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAM 240

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           C +G + EAL+   ++  YG  P+ V +  ++K        +  D++L  M      PD 
Sbjct: 241 CSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDE 300

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA----EE 409
           +T++ ++ +    GF+ +  ++   M + G  PD   YS +  G  +E+  ++A    +E
Sbjct: 301 VTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLLKE 360

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY- 468
           LL  M+     P+ V F TII+  C  G  DRAI+V D+M EHG  P++ T+  ++ G+ 
Sbjct: 361 LLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFL 420

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLA-------EARRATGLTKEAK 513
            ++ +   A ++L +M + G+ P  +T+  LA       E  RA G+ +  +
Sbjct: 421 CKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQ 472



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 119/261 (45%), Gaps = 8/261 (3%)

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           Q GE D A  ++  +  +G  P    C I+I   C +G++ +A    R ++  G    ++
Sbjct: 73  QRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADA---ERVVEALGPSATII 129

Query: 320 IFNLLIKGFVEIMDRDG-VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
            +N ++ G+     R G +D    ++      PD  TY+ ++ A    G +     +FDD
Sbjct: 130 TYNTMVNGYC----RAGNIDAARRMIDSVPFAPDTFTYNPLIRALCVRGCVLDALAVFDD 185

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M   G  P    YSIL     +E   ++A  LL  M   G  P++V +  +I+  CS G 
Sbjct: 186 MLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLINAMCSQGD 245

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +  A++V + +  +G  P+  T+  ++     + +   A+++L  M +    P + TF  
Sbjct: 246 VGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAPDEVTFNA 305

Query: 499 LAEARRATGLTKEAKRILSKI 519
           +  +    G    A ++L+++
Sbjct: 306 VITSLCQKGFVGRATKVLAQM 326



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 82/355 (23%), Positives = 148/355 (41%), Gaps = 54/355 (15%)

Query: 210 KPNLRT---YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           KP  R+    N  +R       +  A  ++H ++ SG  P V+  N +      +G    
Sbjct: 55  KPPARSGGGANRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVAD 114

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           AE V+   E  G      T   +++GYC+ G I  A R   ++      P+   +N LI+
Sbjct: 115 AERVV---EALGPSATIITYNTMVNGYCRAGNIDAARRMIDSVP---FAPDTFTYNPLIR 168

Query: 327 GFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIM----------------------- 360
                  R  V + LA+  +      +P V+TYS ++                       
Sbjct: 169 ALCV---RGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKG 225

Query: 361 ------------NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
                       NA  + G + +  ++ + +   G KPDA  Y+ + K     +  E+A+
Sbjct: 226 CEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEAD 285

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           +LL  M  +   P+ V F  +I+  C  G + RA +V  +M EHG +P++ T+ ++M G 
Sbjct: 286 KLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGL 345

Query: 469 SEARQPWRA----EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + R+   A    +E+L  M +    P + TF  +  +    GL   A +++ ++
Sbjct: 346 CKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEM 400



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 59/123 (47%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           L +  K +EA  + N ++  G  P   TY +L   L+ +        +  +V+  G+ PD
Sbjct: 420 LCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPD 479

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
            + +NA++    +    + A+D F  M  +G  P  STY  L++G    G  EE+ +LL 
Sbjct: 480 KMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLG 539

Query: 202 LMS 204
            +S
Sbjct: 540 NLS 542


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/490 (24%), Positives = 231/490 (47%), Gaps = 38/490 (7%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           +E C+ +     + NS ++RG+ ++       L+E G  P +V    +L  L +  +   
Sbjct: 199 EEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCMGNQIGV 258

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
                  +  +G  P+ + F+ +IN + +   ++EA   +  M E G+ P    Y+ LI 
Sbjct: 259 ASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILIN 318

Query: 186 GYGIAGKPEES--------------------------VKLLDL---------MSREGNVK 210
           G   AGK EE                           V++ DL         M +EG + 
Sbjct: 319 GLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEG-IS 377

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN+ TY++L+   C    + EA  V  ++   G++P V+TY+++   + ++        +
Sbjct: 378 PNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGL 437

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
              M   G  P+   C ++I+G  ++G + EALRF     + G+  N  +FN LI G   
Sbjct: 438 YGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFR 497

Query: 331 I-MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +   RDG+ ++  LM  ++V PDV+TY+ ++   +  G +D+   +F  + K G  PD  
Sbjct: 498 LKRTRDGL-KMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHI 556

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y  L  G+ ++++P    ++   M  +G  P++ I+  +I+ +  +G ++  +E+  ++
Sbjct: 557 IYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREI 616

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
            ++G+ P++ T+ T++ GY   +   +A ++ +++K     P   TF +L +A    G  
Sbjct: 617 IKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRM 676

Query: 510 KEAKRILSKI 519
            +A  I S +
Sbjct: 677 DDAMLIFSSM 686



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/535 (24%), Positives = 246/535 (45%), Gaps = 16/535 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+N L   G+  EA  +F  +++ G +PS++TY++L+      +       +  
Sbjct: 380 VVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYG 439

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  PD +  + +IN  S  G M+EA+  F++  + GLT     +N LI G     
Sbjct: 440 IMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLK 499

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  + +K+  LM     V P++ TY VLV+    +  + EA  +  ++   G  PD + Y
Sbjct: 500 RTRDGLKMYILMGMY-KVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIY 558

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   + +  +     ++   M+ NG+ P+     ++I+ + +EG ++  L   R + +
Sbjct: 559 CTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIK 618

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           YG+ P++V +N +I G+  +       ++  ++K  R  P+ IT++ +++A+   G MD 
Sbjct: 619 YGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDD 678

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              IF  M + G +P+   YS L  GY + +  E A EL   M+     PN+V ++ +I 
Sbjct: 679 AMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILID 738

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G M+ A   F       + P++  +  L+ GY +  +   A  +   M   G+ P
Sbjct: 739 GLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMP 798

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESL-ERLYHKEATTA 550
                 LL +A    G       I S +  +   N +      PV S+ + L +K +   
Sbjct: 799 DD----LLQKALAEYGFQDSQASIYSTVFPESPLNLLVC----PVSSMGDILQNKRSNDD 850

Query: 551 SYPNLLQIPNVVSSD------QKGSAAALKKGRMLLRDADSSLECSWFATTSMYL 599
            +P  + + + +SSD       KG+A   + G  + ++A       ++  + + L
Sbjct: 851 LFPPNILVADDLSSDVNQHSHAKGNARCKEYGNQIEKEAAEDNSIGYYGASEVVL 905



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/416 (22%), Positives = 183/416 (43%), Gaps = 32/416 (7%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPT-------------------- 176
           G +P +++ + +++ +  +G ++ A+DTF  M + G++ +                    
Sbjct: 136 GSNPSTVY-SFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 177 TSTYNTLIKGYGIA----------GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
              Y  + KG G+           G+ E+ +     +   G V P +   N +++  C  
Sbjct: 195 LENYEEMCKGLGVYEFVFNSFLKRGEVEKGLNFHRALVERGLV-PKIVDCNKILKGLCMG 253

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
             I  A +    M  SG  P++VT++T+   Y +    D+A  +   M   G+ P+    
Sbjct: 254 NQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIY 313

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
            I+I+G  + GK++E           GV  ++VIF+ ++  +V + D     EV   M +
Sbjct: 314 SILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLK 373

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             ++P+V+TYS ++N     G + +   +F  + K G++P    YS L  G+ + +    
Sbjct: 374 EGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRD 433

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
              L   M+  G  P+VV+ + +I+G    G MD A+  F +  + G++ N   F  L+ 
Sbjct: 434 GFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALID 493

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G    ++     ++  +M  + V P   T+ +L +     G   EA  +  ++  K
Sbjct: 494 GCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKK 549


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/430 (27%), Positives = 212/430 (49%), Gaps = 1/430 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+   +  G  Q++  IF  +   G  PS+ T   +L ++       S+ S + ++ +  
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRK 188

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   FN +IN     G+ +++     KM++SG  PT  TYNT++  Y   G+ + ++
Sbjct: 189 ICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LLD M+ +G V  ++ TYN+L+   C      + + ++  M    + P+ VTYNT+   
Sbjct: 249 ELLDHMNLKG-VNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNG 307

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           ++  G+   A +++ EM   G+ PN  T   +I G+  EG  KEAL+    M+  G+   
Sbjct: 308 FSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGT 367

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V + +L+ G  +  + D        MK   V    ITY+ +++     GF+D+   + +
Sbjct: 368 EVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLN 427

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K GI PD   YS L  G+ R    + A+E++  +   G  PN +I++T+I   C  G
Sbjct: 428 EMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +   I +++ M   G +P+  TF  L+    +A +   AEE ++ M + G+ P   +F 
Sbjct: 488 CLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFD 547

Query: 498 LLAEARRATG 507
            L     ++G
Sbjct: 548 CLINGYGSSG 557



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 200/422 (47%), Gaps = 1/422 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           + ++ C  V +   L+N L   G  +++  +   + + G+ P++VTY T+L     + RF
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            +   ++  +   G++ D   +N +I+    S    +       M++  + P   TYNTL
Sbjct: 245 KAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTL 304

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           + G+   GK   + +LL+ M   G + PN  T+N L+    +E N  EA  + H M A G
Sbjct: 305 LNGFSNEGKVLIARQLLNEMLTFG-LSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKG 363

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           +    V+Y  +     +N E D A    + M+ NGV     T   +I G CK G + EA+
Sbjct: 364 LIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M + G+ P++V ++ LI GF  +       E++  +    ++P+ I YST++   
Sbjct: 424 VMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G + +   I++ M   G  PD   +++L     +  +  +AEE +  M   G  PN 
Sbjct: 484 CRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNA 543

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           V F  +I+G+ S G   +A  VFD+M + G  P   T+ +L+ G  +      AE+ L+ 
Sbjct: 544 VSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKS 603

Query: 484 MK 485
           ++
Sbjct: 604 LQ 605



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 185/390 (47%), Gaps = 1/390 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L    +  +   +  ++ +    P+ VTY TLL   + + +      +++++   G
Sbjct: 269 LIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFG 328

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ + FNA+I+     GN +EA+  F  M+  GL  T  +Y  L+ G     + + + 
Sbjct: 329 LSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLAR 388

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M R G V     TY  ++   C    + EA  ++++M+  G+ PD+VTY+ +   
Sbjct: 389 GFYMRMKRNG-VCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALING 447

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G    A+E++  +   G+ PNG     +I   C+ G +KE +R    M   G  P+
Sbjct: 448 FCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPD 507

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              FN+L+    +       +E +  M    + P+ +++  ++N + ++G   K   +FD
Sbjct: 508 HFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFD 567

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K G  P    Y  L KG  +      AE+ L ++       + V+  T+I+  C  G
Sbjct: 568 EMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSG 627

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           ++D+A+ +F +M +  + P+  T+ +L+ G
Sbjct: 628 NLDKAVSLFGEMVQRSILPDSFTYTSLISG 657



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/458 (22%), Positives = 197/458 (43%), Gaps = 37/458 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L++  I  G  +EA  +F+ +   G   + V+Y  LL  L     F+       ++
Sbjct: 335 TFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRM 394

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + NG+    I +  +I+   ++G ++EA+    +M + G+ P   TY+ LI G+   G+ 
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRL 454

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + + +++  + R G + PN   Y+ L+   C    + E   +   M   G  PD  T+N 
Sbjct: 455 KTAKEIVCRIYRVG-LSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNV 513

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           + T+  + G+  +AEE +  M  +G+ PN  +   +I+GY   G+  +A      M + G
Sbjct: 514 LVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVG 573

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
            HP    +  L+KG  +       ++ L  ++      D +  +T++ A   +G +DK  
Sbjct: 574 HHPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAV 633

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVRE----------QEPEKAEELL------------ 411
            +F +M +  I PD+  Y+ L  G  R+          +E E    L+            
Sbjct: 634 SLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDG 693

Query: 412 --------------MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
                           M + G   +VV    +I G+   G +++  ++  +M      PN
Sbjct: 694 MFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPN 753

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           L T+  L+ GYS+ +    +  + + M   G+ P K T
Sbjct: 754 LTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLT 791



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 105/478 (21%), Positives = 201/478 (42%), Gaps = 39/478 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + + L+N     G+ + A+ I   +   G  P+ + Y+TL+              I  
Sbjct: 438 IVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYE 497

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  PD   FN ++ +  ++G + EA +    M   G+ P   +++ LI GYG +G
Sbjct: 498 AMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSG 557

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  ++  + D M++ G+  P   TY  L++  C   ++  A   +  +       D V  
Sbjct: 558 EGLKAFSVFDEMTKVGH-HPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMC 616

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+ TA  ++G  D+A  +  EM    + P+  T   +ISG C++GK   A+ FA+  + 
Sbjct: 617 NTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 312 YG-VHPNLVIFNLLIKG------------FVEIMDRDGV--------------------- 337
            G + PN V++   + G            F + MD+ G+                     
Sbjct: 677 RGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIE 736

Query: 338 --DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD-AHAYSIL 394
              ++L  M      P++ TY+ +++ +S    +     ++  M  +GI PD    YSI+
Sbjct: 737 KTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSII 796

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G       E   ++L   I  G   +   F  +IS  C++G ++ A ++ + M   G+
Sbjct: 797 L-GICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGI 855

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           S +  T + ++   +   +   +  +L  M   G+ P+   ++ L       G  K A
Sbjct: 856 SLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTA 913



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/442 (21%), Positives = 192/442 (43%), Gaps = 41/442 (9%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM--SQVEE 135
            L+ ++ + G   +A ++F  +++    P   TYT+L++ L   ++  ++ +I+   + E 
Sbjct: 619  LITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLC--RKGKTVIAILFAKEAEA 676

Query: 136  NG-MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G + P+ + +   ++   ++G  +       +M + GLT    T N +I GY   GK E
Sbjct: 677  RGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIE 736

Query: 195  ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT---- 250
            ++  LL  M  + N  PNL TYN+L+  +   K+++ ++ +   M  SG+ PD +T    
Sbjct: 737  KTHDLLFEMGNQ-NQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSI 795

Query: 251  -------------------------------YNTIATAYAQNGEADQAEEVIVEMEHNGV 279
                                           +N + +    NGE + A +++  M   G+
Sbjct: 796  ILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGI 855

Query: 280  QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
              +  TC  I+S   +  + +E+      M + G+ P    +  L+ G   + D      
Sbjct: 856  SLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFV 915

Query: 340  VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
            V   M   ++ P  +  S ++ A +  G  D+   +   M K  + P   +++ L   + 
Sbjct: 916  VKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFC 975

Query: 400  REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
            +     +A EL + M   G   ++V +  +I+G C+ G M  A E+F++M   G   N+ 
Sbjct: 976  KNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVT 1035

Query: 460  TFETLMWGYSEARQPWRAEEIL 481
            T++ L+ G       +   +I+
Sbjct: 1036 TYKALVGGILSQGTEFSGTDII 1057



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/318 (24%), Positives = 139/318 (43%)

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
           LM+       N   +++L+R +  E  I ++  +   M   G  P V T N I  +  ++
Sbjct: 112 LMATYRLCNSNPSVFDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKS 171

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
            E       + EM    + P+  T  I+I+  C EG  K++    + M++ G  P +V +
Sbjct: 172 CEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTY 231

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N ++  + +        E+L  M    VN DV TY+ +++    +    K   +  DM K
Sbjct: 232 NTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRK 291

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
             I P+   Y+ L  G+  E +   A +LL  M+  G  PN V F  +I G  S+G+   
Sbjct: 292 RMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKE 351

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A+++F  M   G+     ++  L+ G  +  +   A      MK  GV   + T+  + +
Sbjct: 352 ALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMID 411

Query: 502 ARRATGLTKEAKRILSKI 519
                G   EA  +L+++
Sbjct: 412 GLCKNGFLDEAVVMLNEM 429



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 61/235 (25%), Positives = 108/235 (45%)

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           I+I  Y +EG I+++L   R M  YG +P++   N ++   V+  +   V   L  M + 
Sbjct: 128 ILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKR 187

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
           ++ PDV T++ ++N     G   K   +   M K+G  P    Y+ +   Y ++   + A
Sbjct: 188 KICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAA 247

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            ELL  M   G + +V  +  +I   C      +   +   M +  + PN  T+ TL+ G
Sbjct: 248 IELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNG 307

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +S   +   A ++L  M  FG+ P   TF  L +   + G  KEA ++   ++ K
Sbjct: 308 FSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAK 362



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/369 (20%), Positives = 154/369 (41%), Gaps = 36/369 (9%)

Query: 70   RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
            R V +   +++     GK ++   +   +      P+L TY  LL   + +K  ++   +
Sbjct: 717  RDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFML 776

Query: 130  MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
               +  +G+ PD +   ++I    ES            M E GL         ++K +  
Sbjct: 777  YRSMILSGILPDKLTCYSIILGICES-----------NMLEIGL--------KILKAFIC 817

Query: 190  AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
             G                 V+ +  T+N+L+   C    I  A+++++ M + G+  D  
Sbjct: 818  RG-----------------VEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKN 860

Query: 250  TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            T + I +   +N    ++  V+ EM   G+ P  R    +++G C+ G IK A      M
Sbjct: 861  TCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEM 920

Query: 310  KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              + + P  V  + +++   +    D    +L  M + ++ P + +++T+M+ +   G +
Sbjct: 921  IAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNV 980

Query: 370  DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
             +  E+   M   G+K D  +Y++L  G   + +   A EL   M   GF  NV  +  +
Sbjct: 981  TEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKAL 1040

Query: 430  ISGWCSDGS 438
            + G  S G+
Sbjct: 1041 VGGILSQGT 1049



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 74/161 (45%), Gaps = 5/161 (3%)

Query: 342 ALMKEFRV---NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           ALM  +R+   NP V  +  ++  +   G +    EIF  MG  G  P  +  + +    
Sbjct: 111 ALMATYRLCNSNPSV--FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSI 168

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           V+  E       L  M++    P+V  F  +I+  C++GS  ++  +  KM + G +P +
Sbjct: 169 VKSCEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTI 228

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
            T+ T++  Y +  +   A E+L  M   GV+    T+ +L
Sbjct: 229 VTYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNML 269


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 216/442 (48%), Gaps = 1/442 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++  +  G   EA  +   ++  G +P+ +TY  L+  L    + +    ++ Q+  + 
Sbjct: 355 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD+I +N +I       + ++A     +M+ +G++P   TY+ +I G   +G+PE++ 
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 474

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ M+ +G +KPN   Y  L+  +C E N++ A  +  KM    + PD+  YN++   
Sbjct: 475 DLLEEMTTKG-LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFG 533

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            ++ G  +++ +   +M+  G+ PN  T   +I GY K G ++ A +  + M + G+ PN
Sbjct: 534 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 593

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            VI+  L++ + +  D + V      M +  V  D   Y  +++  S++G M+    +  
Sbjct: 594 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 653

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            + K G  PD H YS L  G  +  + EKA  +L  M + G  PN+V +  +I G C  G
Sbjct: 654 GIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSG 713

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +  A  VF+ +   G+ PN  T+ +L+ G  +      A  +   M A G+ P    + 
Sbjct: 714 DISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYS 773

Query: 498 LLAEARRATGLTKEAKRILSKI 519
           +L     + G  ++A  ++ ++
Sbjct: 774 VLTTGCSSAGDLEQAMFLIEEM 795



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 218/450 (48%), Gaps = 1/450 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++R    L+  L+          +   ++  G  P + TY+TL+ A    + F++   ++
Sbjct: 208 SIRCCNALLKDLLRADAMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVL 267

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ E G   +++ +N +I     SG +EEA      M++ GL P   TY  LI G   +
Sbjct: 268 VEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKS 327

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +  E+  LLD MS    +KPN+  Y  L+  +  E N  EA+ ++ +M A+G++P+ +T
Sbjct: 328 RRSNEAKALLDEMSC-AELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKIT 386

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +     + G+ D+A  ++ +M  +  +P+  T  +II G+ +    K+A R    M+
Sbjct: 387 YDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEME 446

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ PN+  ++++I G  +  + +   ++L  M    + P+   Y+ +++ +   G + 
Sbjct: 447 NAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVS 506

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              EIFD M K  + PD + Y+ L  G  +    E++ +    M E G  PN   ++ +I
Sbjct: 507 LACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLI 566

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+  +G ++ A ++  +M + G+ PN   +  L+  Y ++    +     + M   GV 
Sbjct: 567 HGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVM 626

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIK 520
                + +L     ++G  + A R+LS I+
Sbjct: 627 LDNRIYGILIHNLSSSGNMEAAFRVLSGIE 656



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 209/433 (48%), Gaps = 1/433 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R+   +  L+++  + G+ Q+A  +   + + G  PS+     LL  L        +  +
Sbjct: 172 RSPAVLDVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKV 231

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
              +   G+ PD   ++ +I A+ +    + A     +M+E G    T TYN LI G   
Sbjct: 232 REFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCR 291

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +G  EE+      M   G V P+  TY  L+   C  +   EA  ++ +M+ + +KP+VV
Sbjct: 292 SGAVEEAFGFKKDMEDYGLV-PDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVV 350

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y  +   + + G AD+A ++I EM   GVQPN  T   ++ G CK G++  A    + M
Sbjct: 351 VYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQM 410

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
                 P+ + +NL+I+G      +     +L+ M+   ++P+V TYS +++    +G  
Sbjct: 411 VRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEP 470

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +K  ++ ++M   G+KP+A  Y+ L  GY RE     A E+   M +    P++  + ++
Sbjct: 471 EKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSL 530

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G    G ++ + + F +M E G+ PN  T+  L+ GY +      AE+++Q M   G+
Sbjct: 531 IFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGL 590

Query: 490 HPQKSTFLLLAEA 502
            P    ++ L E+
Sbjct: 591 KPNDVIYIDLLES 603



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 201/433 (46%), Gaps = 46/433 (10%)

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           SIH  +S   ++G    ++  + +++ + +SG +++A +    M++ G+ P+    N L+
Sbjct: 161 SIHRALS---DSGHRSPAVL-DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALL 216

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           K    A       K+ + M   G + P++ TY+ L+ A+C  +    A  V+ +M   G 
Sbjct: 217 KDLLRADAMALLWKVREFMVGAG-ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGC 275

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
             + VTYN +     ++G  ++A     +ME  G+ P+G T G +I+G CK  +  EA  
Sbjct: 276 GLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKA 335

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMN 361
               M    + PN+V++  LI GF   M     DE   ++KE     V P+ ITY  ++ 
Sbjct: 336 LLDEMSCAELKPNVVVYANLIDGF---MREGNADEAFKMIKEMVAAGVQPNKITYDNLVR 392

Query: 362 AWSTAGFMDKCK-----------------------------------EIFDDMGKAGIKP 386
                G MD+                                      +  +M  AGI P
Sbjct: 393 GLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISP 452

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           + + YSI+  G  +  EPEKA +LL  M   G  PN  ++  +ISG+C +G++  A E+F
Sbjct: 453 NVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIF 512

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           DKM +  V P+L  + +L++G S+  +   + +    M+  G+ P + T+  L       
Sbjct: 513 DKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKN 572

Query: 507 GLTKEAKRILSKI 519
           G  + A++++ ++
Sbjct: 573 GDLESAEQLVQRM 585



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/282 (23%), Positives = 130/282 (46%), Gaps = 37/282 (13%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + G    A+ +FN+++  G  P+ VTYT+L+         ++   + +++   G
Sbjct: 705 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG 764

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD+  ++ +    S +G++E+AM    +M   G   + S++N L+ G+   GK +E++
Sbjct: 765 ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETL 823

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM-------------------HK 238
           KLL ++   G V PN  T   ++        ++E   +                      
Sbjct: 824 KLLHVIMGRGLV-PNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMD 882

Query: 239 MAASGMKP-DVVTYNTIATAYAQNGEADQA---EEVIVEMEHNGVQPNGRTCGI-IISGY 293
           M   G  P DVV  + +   + + G  D+A    +VIV        P G +  + I+   
Sbjct: 883 MINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKS----APMGCSSYLAIVDNL 936

Query: 294 CKEGKIKEALRFARTMKEYGVHPN-----LVIFNLLIKGFVE 330
           C++GK+ EAL   + M + G+ P+     +++ NL   G+++
Sbjct: 937 CRKGKLSEALNLLKEMDKRGICPSENQCLILLTNLHTSGYIQ 978



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/166 (21%), Positives = 70/166 (42%)

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++ +  +G +    E+   M   G+ P     + L K  +R        ++   M+ +
Sbjct: 179 VLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGA 238

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  P+V  ++T+I  +C     D A +V  +M E G   N  T+  L+ G   +     A
Sbjct: 239 GISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEA 298

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
               + M+ +G+ P   T+  L      +  + EAK +L ++   E
Sbjct: 299 FGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAE 344


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 192/386 (49%), Gaps = 2/386 (0%)

Query: 87  KPQEAQAIFNNLIEG-GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           +P+EA A+   + E  G  PSL T+  +L  L    +  +          NG   D   +
Sbjct: 109 EPEEAFAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTY 168

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
            A+++  +++  +++A+    K+  +G TPT +TYN L+ G    G+ EE++ LL  +  
Sbjct: 169 TAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVD 228

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G   P++ TY  L+     EK   EA+ +  +MA  G+  D V Y  +     Q G+  
Sbjct: 229 NG-CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIP 287

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           QA  V   M   G  P+  T   +I G CK G+I  A+R  ++M+  G+ PN V+++ LI
Sbjct: 288 QASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALI 347

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G  +    D   E+LA MK+    PD ITY+ +++    +G ++  +  FD+M +AG K
Sbjct: 348 HGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCK 407

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD + Y+IL  G+ +    + A  +   M  S   PNVV + T+ISG C    + +A   
Sbjct: 408 PDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLY 467

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEA 471
           F  M E G  P+   + +L+ G  ++
Sbjct: 468 FQHMKERGCPPDSFVYSSLVDGLCKS 493



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 195/422 (46%), Gaps = 3/422 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++++   +++ L + GK   A   F      G    + TYT ++  L   K+     ++M
Sbjct: 129 SLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALM 188

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  NG  P    +NA++N   + G +EEA+D   K+ ++G TP   TY +LI G G  
Sbjct: 189 EKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKE 248

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +  E+ KL   M+  G V   +  Y  L+R       I +A +V   M + G  PDVVT
Sbjct: 249 KRSFEAYKLFKEMALRGLVLDTV-CYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVT 307

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            +T+     + G    A  +   ME  G+ PN      +I G CK  K+  AL     MK
Sbjct: 308 LSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMK 367

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           +    P+ + +N+LI G  +  D +        M E    PDV TY+ +++ +  AG  D
Sbjct: 368 KAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTD 427

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               +FDDM  +   P+   Y  L  G  + ++  KA      M E G  P+  ++++++
Sbjct: 428 AACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLV 487

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV- 489
            G C  G ++    +FD+M   GV+ N +T   L++   +A +   A  +   ++  G+ 
Sbjct: 488 DGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP 546

Query: 490 HP 491
           HP
Sbjct: 547 HP 548



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/374 (23%), Positives = 166/374 (44%), Gaps = 35/374 (9%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           NA+++ F+ +    EA +       +   P   T+N LI GY +A +PEE+  ++  M  
Sbjct: 63  NALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEE 122

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +  V P+L+T+N+++   C    +  A +       +G   D+ TY  I    A+N +  
Sbjct: 123 DYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQ 182

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A  ++ ++  NG  P   T   +++G CK G+++EA+   R + + G            
Sbjct: 183 DAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC----------- 231

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                                    PDV+TY+++++         +  ++F +M   G+ 
Sbjct: 232 ------------------------TPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLV 267

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
            D   Y+ L +G ++  +  +A  +  TM   G  P+VV  +T+I G C  G +  A+ +
Sbjct: 268 LDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRI 327

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F  M   G++PN   +  L+ G  +AR+   A E+L  MK     P   T+ +L +    
Sbjct: 328 FKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCK 387

Query: 506 TGLTKEAKRILSKI 519
           +G  + A+    ++
Sbjct: 388 SGDVEAARAFFDEM 401


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/480 (25%), Positives = 224/480 (46%), Gaps = 38/480 (7%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L+N     G+  EA A+ + ++E   +P LVT +TL+  L ++ R +    ++ ++
Sbjct: 142 TFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRM 201

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE----------------------- 170
            E G  PD + +  V+N   +SGN   A+D F KM+E                       
Sbjct: 202 VEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSF 261

Query: 171 ------------SGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYN 217
                        G+     TY++LI G    GK ++  K+L +++ R  N+ P++ T++
Sbjct: 262 DDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGR--NIIPDVVTFS 319

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            L+  +  E  + EA  + ++M   G+ PD +TYN++   + +     +A ++   M   
Sbjct: 320 ALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSK 379

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G +P+  T  I+I+ YCK  ++ + +R  R +   G+ PN + +N L+ GF +    +  
Sbjct: 380 GCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAA 439

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E+   M    V P V+TY  +++     G ++K  EIF+ M K+ +      Y+I+  G
Sbjct: 440 KELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHG 499

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
                + + A  L  ++ + G  P+VV +  +I G C  GS+  A  +F KM E G +P+
Sbjct: 500 MCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPD 559

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
             T+  L+  +        + E+++ MK  G     ST  ++ +      L K    +LS
Sbjct: 560 DFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDKSFLDMLS 619



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 226/449 (50%), Gaps = 2/449 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           +L N +++  K  +A  +F ++I+    P+ + +  L +A+   K+++ +      +E N
Sbjct: 41  RLRNGIVDI-KVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELN 99

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G++ D      +IN +     +  A     +  + G  P T T++TL+ G+ + G+  E+
Sbjct: 100 GIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEA 159

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           V L+D M  E   +P+L T + L+   C +  ++EA  ++ +M   G +PD VTY  +  
Sbjct: 160 VALVDRMV-EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLN 218

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              ++G +  A ++  +ME   ++ +     I+I   CK+G   +AL     M+  G+  
Sbjct: 219 RLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKA 278

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++V ++ LI G       D   ++L  M    + PDV+T+S +++ +   G + + KE++
Sbjct: 279 DVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELY 338

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M   GI PD   Y+ L  G+ +E    +A ++   M+  G  P++V ++ +I+ +C  
Sbjct: 339 NEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKA 398

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             +D  + +F ++   G+ PN  T+ TL+ G+ ++ +   A+E+ Q M + GV P   T+
Sbjct: 399 KRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458

Query: 497 LLLAEARRATGLTKEAKRILSKIKNKERT 525
            +L +     G   +A  I  K++    T
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMT 487



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 130/256 (50%), Gaps = 1/256 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++  ++ GK  EA+ ++N +I  G  P  +TY +L+     +   +  + +  
Sbjct: 315 VVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD 374

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G +PD + ++ +IN++ ++  +++ M  F ++   GL P T TYNTL+ G+  +G
Sbjct: 375 LMVSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSG 434

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K   + +L   M   G V P++ TY +L+   C+   + +A  +  KM  S M   +  Y
Sbjct: 435 KLNAAKELFQEMVSRG-VPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIY 493

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N I        + D A  +   +   GV+P+  T  ++I G CK+G + EA    R MKE
Sbjct: 494 NIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553

Query: 312 YGVHPNLVIFNLLIKG 327
            G  P+   +N+LI+ 
Sbjct: 554 DGCTPDDFTYNILIRA 569



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 148/317 (46%), Gaps = 1/317 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+  L   GK  +   +   +I     P +VT++ L+     + +      + +
Sbjct: 280 VVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYN 339

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD+I +N++I+ F +   + EA   F  M   G  P   TY+ LI  Y  A 
Sbjct: 340 EMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAK 399

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + ++ ++L   +S +G + PN  TYN LV  +C    +  A  +  +M + G+ P VVTY
Sbjct: 400 RVDDGMRLFREISSKGLI-PNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTY 458

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +      NGE ++A E+  +M+ + +        III G C   K+ +A     ++ +
Sbjct: 459 GILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSD 518

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P++V +N++I G  +       D +   MKE    PD  TY+ ++ A      +  
Sbjct: 519 KGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSGLIS 578

Query: 372 CKEIFDDMGKAGIKPDA 388
             E+ ++M   G   D+
Sbjct: 579 SVELIEEMKVCGFSADS 595



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 136/304 (44%), Gaps = 6/304 (1%)

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           +Y   +R    +  + +A ++   M  S   P  + +N + +A A+  + D        M
Sbjct: 37  SYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGM 96

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
           E NG++ +  T  I+I+ YC++ K+  A        + G  P+ + F+ L+ GF      
Sbjct: 97  ELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCL---E 153

Query: 335 DGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
             V E +AL   M E +  PD++T ST++N     G + +   + D M + G +PD   Y
Sbjct: 154 GRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTY 213

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
             +     +      A +L   M E     +VV ++ +I   C DGS D A+ +F++M  
Sbjct: 214 GPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEM 273

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            G+  ++ T+ +L+ G     +     ++L+ M    + P   TF  L +     G   E
Sbjct: 274 KGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLE 333

Query: 512 AKRI 515
           AK +
Sbjct: 334 AKEL 337


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 214/442 (48%), Gaps = 1/442 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L + GK +EA A+F +    G     V YTTL+  L       +      ++ +  
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M PD++ +N  IN     G  +EA     +M+  GL P  STYNT+I  +   G+  +++
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL  M +  ++KPNL TYN LV        + +A  ++++M ++G  P  +T+  +  A
Sbjct: 610 KLLHEM-KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            +Q+   D   ++   M + G+  +      ++   C  G  ++A      M   G+ P+
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + FN LI G  +    D      A M    ++P++ T++T++    + G + +   +  
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K+G++P+   Y ILA G+ ++    +A  L   M+  GF P V  +  +IS +   G
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M +A E+F  M + GV P   T++ L+ G+S  R     ++ L+ MK  G  P K T  
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908

Query: 498 LLAEARRATGLTKEAKRILSKI 519
            +  A    G+T +A+R+L  +
Sbjct: 909 FICRAFSKPGMTWQAQRLLKNL 930



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 209/482 (43%), Gaps = 36/482 (7%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T LM+ L ++GK  E +      +     P+ VTYT L+ AL      +    ++ ++EE
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY-------- 187
             + P+ + F++VIN F + G +++A +    MKE G+ P   TY TLI G+        
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 188 -----------GIA----------------GKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
                      G+                 GK EE++ L    S  G +  +   Y  L+
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG-LSLDHVNYTTLI 526

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
                  ++  A+    ++    M PD V YN         G+  +A+  + EM + G++
Sbjct: 527 DGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLK 586

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+  T   +I  +C++G+  +AL+    MK   + PNL+ +N L+ G       +    +
Sbjct: 587 PDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L  M     +P  +T+  ++ A S +  +D   +I + M  AG+  D   Y+ L +    
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
                KA  +L  M+ SG  P+ + F  +I G C    +D A   + +M    +SPN+ T
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           F TL+ G     +   A  +L  M+  G+ P   T+ +LA          EA R+  ++ 
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMV 826

Query: 521 NK 522
            K
Sbjct: 827 GK 828



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 201/444 (45%), Gaps = 5/444 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+      G+   A+ + + + E G  P++ TYT  +      K       +   +  NG
Sbjct: 210 LVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNG 269

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D +  +A++      G   EA   F +M + G  P   TY TLI     AG+ +E +
Sbjct: 270 VLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELL 329

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M   G V  +L TY  L+     +    E  + +    +  + P+ VTY  +  A
Sbjct: 330 SLLGEMVSRGVVM-DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDA 388

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+AE+V++EME   + PN  T   +I+G+ K G + +A  + R MKE G++PN
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVL--ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           +V +  LI GF +   +D   EV    L +  +VN  ++   +++N     G +++   +
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIV--DSLVNGLRQNGKIEEAMAL 506

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F D   +G+  D   Y+ L  G  +  +   A +    +++    P+ V++   I+  C 
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCM 566

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G    A     +M   G+ P+  T+ T++  +    +  +A ++L  MK   + P   T
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 496 FLLLAEARRATGLTKEAKRILSKI 519
           +  L      TG  ++AK +L+++
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEM 650



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 213/448 (47%), Gaps = 1/448 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +++ L+  L   G+  EA A+F  + + G  P+ VTY TL+ +L    R   + S++ 
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+  D + + A+++   + G  +E  DT        L+P   TY  LI     A 
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAH 393

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+ ++L L   E ++ PN+ T++ ++  +     + +A      M   G+ P+VVTY
Sbjct: 394 NVDEAEQVL-LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   + +    D A EV  +M   GV+ N      +++G  + GKI+EA+   +    
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  + V +  LI G  +  D     +    + +  + PD + Y+  +N     G   +
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            K    +M   G+KPD   Y+ +   + R+ E  KA +LL  M  S   PN++ + T+++
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G    G++++A  + ++M   G SP+  T   ++   S++R+     +I + M   G+H 
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
             + +  L +     G+T++A  +L ++
Sbjct: 693 DITVYNTLLQVLCYHGMTRKATVVLEEM 720



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 212/472 (44%), Gaps = 4/472 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + ++N  ++RG   +A      + E G  P++VTY TL+      +  ++   +  
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYH 473

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+  +    ++++N   ++G +EEAM  F     SGL+     Y TLI G   AG
Sbjct: 474 DMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533

Query: 192 KPEESVKL-LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
               + K   +LM R  N+ P+   YNV +   C      EA + + +M   G+KPD  T
Sbjct: 534 DMPTAFKFGQELMDR--NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQST 591

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+  ++ + GE  +A +++ EM+ + ++PN  T   +++G    G +++A      M 
Sbjct: 592 YNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMV 651

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  P+ +    +++   +    D + ++   M    ++ D+  Y+T++      G   
Sbjct: 652 SAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTR 711

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   + ++M  +GI PD   ++ L  G+ +    + A      M+     PN+  F T++
Sbjct: 712 KATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLL 771

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G  S G +  A  V  +M + G+ PN  T++ L  G+ +      A  +   M   G  
Sbjct: 772 GGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFV 831

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
           P+ ST+  L       G+  +AK +   ++ K   +      DI V    R+
Sbjct: 832 PKVSTYNALISDFTKAGMMTQAKELFKDMQ-KRGVHPTSCTYDILVSGWSRI 882



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 191/410 (46%), Gaps = 7/410 (1%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           +P+ V Y  LLAAL+         ++++++ + G+  D +  N ++     +G ++ A  
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAA-- 154

Query: 164 TFWKMKESGLTPTTST-YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
                +  G+       +NTLI GY   G    ++ + D M+ +G +  ++  YN LV  
Sbjct: 155 AALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQG-LPMDVVGYNTLVAG 213

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
           +C    +  A  V+  M  +G+ P+V TY      Y +    ++A ++   M  NGV  +
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   +++G C++G+  EA    R M + G  PN V +  LI    +      +  +L 
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M    V  D++TY+ +M+     G  D+ K+         + P+   Y++L     +  
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAH 393

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             ++AE++L+ M E    PNVV F+++I+G+   G +D+A E    M E G++PN+ T+ 
Sbjct: 394 NVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYG 453

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           TL+ G+ + +    A E+   M   GV   K     L    R  G  +EA
Sbjct: 454 TLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 141/315 (44%), Gaps = 8/315 (2%)

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +P    YN+L+ A  +  +   A  V+ +M   G+  D VT NT+     +NG+ D A  
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 270 VIVEMEHNGVQPNGRTCG--IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
           +    +  G        G   +I+GYC+ G    AL  A  M   G+  ++V +N L+ G
Sbjct: 157 L---ADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLVAG 213

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           F      D    VL +MKE  V+P+V TY+  +  +     +++  ++++ M + G+  D
Sbjct: 214 FCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLD 273

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
               S L  G  R+    +A  L   M + G  PN V + T+I      G     + +  
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           +M   GV  +L T+  LM    +  +    ++ L+   +  + P   T+ +L +A     
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAH 393

Query: 508 LTKEAKRILSKIKNK 522
              EA+++L +++ K
Sbjct: 394 NVDEAEQVLLEMEEK 408



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 1/152 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   L+  L   G+  EA  +   + + G +P+ +TY  L      Q        +  
Sbjct: 764 IATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYC 823

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  P    +NA+I+ F+++G M +A + F  M++ G+ PT+ TY+ L+ G+    
Sbjct: 824 EMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIR 883

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              E  K L  M  +G   P+  T + + RA+
Sbjct: 884 NGTEVKKCLKDMKEKG-FSPSKGTLSFICRAF 914


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 221/456 (48%), Gaps = 8/456 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH--KPSLVTYTTLLAALTIQKRFNSIHSI 129
           V S + L+ SL ++GK  +A  +   + EGG    P++V Y T++     +   N    +
Sbjct: 185 VFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDL 244

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ + G+ PD + +N+V++A  ++  M++A     +M    + P   TYN LI GY  
Sbjct: 245 FKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSS 304

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+ +E+V++   M R  ++ P++ T ++L+ + C    I EA +V   MA  G  PDV 
Sbjct: 305 TGQWKEAVRVFKEMRRH-SILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 363

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +YN +   YA  G      ++   M  +G+ P+  T  ++I  Y   G + +A+     M
Sbjct: 364 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM 423

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +++GV P++V +  +I     I   D   E    M +  V PD   Y+ ++  + T G +
Sbjct: 424 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSL 483

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            K KE+  ++   G+  D   +S +     +      A+ +    +  G HP+ V++  +
Sbjct: 484 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 543

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+C  G M++A+ VFD M   G+ PN+  + TL+ GY +  +      + + M   G+
Sbjct: 544 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGI 603

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
            P    + ++ +     GL +  + + +K+K  E T
Sbjct: 604 KPSTILYSIIID-----GLFEAGRTVPAKMKFHEMT 634



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 210/452 (46%), Gaps = 39/452 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSIMSQVEEN 136
           LM+      +P+ A A F  L+  G + +++    LL      KR + ++  ++ +  E 
Sbjct: 120 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDILLHRTPEL 179

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG--LTPTTSTYNTLIKGYGIAGKPE 194
           G  PD   ++ ++ +  + G   +A D    M E G   +P    YNT+I G+   G   
Sbjct: 180 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVN 239

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++  L   M + G + P+L TYN +V A C  + + +A   + +M    + P+  TYN +
Sbjct: 240 KACDLFKEMVQRG-IPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNL 298

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              Y+  G+  +A  V  EM  + + P+  T  +++   CK GKIKEA     TM   G 
Sbjct: 299 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 358

Query: 315 HPNLVIFNLLIKGFV------------EIMDRDGV--------------------DEVLA 342
           +P++  +N+++ G+             ++M  DG+                    D+ + 
Sbjct: 359 NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMI 418

Query: 343 LMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +  E R   V PDV+TY T++ A    G MD   E F+ M   G+ PD +AY+ L +G+ 
Sbjct: 419 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 478

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
                 KA+EL+  ++ +G H ++V F++II+  C  G +  A  +FD     G+ P+  
Sbjct: 479 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAV 538

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            +  LM GY    +  +A  +   M + G+ P
Sbjct: 539 VYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 570



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 219/483 (45%), Gaps = 36/483 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT------------- 118
           V +   +++   + G   +A  +F  +++ G  P LVTY +++ AL              
Sbjct: 222 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLR 281

Query: 119 --IQKRF--------NSIHS------------IMSQVEENGMDPDSIFFNAVINAFSESG 156
             + KR         N I+             +  ++  + + PD +  + ++ +  + G
Sbjct: 282 QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 341

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            ++EA D F  M   G  P   +YN ++ GY   G   +   L DLM  +G + P+  T+
Sbjct: 342 KIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDG-IAPDFYTF 400

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           NVL++A+ N   + +A  + ++M   G+KPDVVTY T+  A  + G+ D A E   +M  
Sbjct: 401 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 460

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            GV P+      +I G+C  G + +A      +   G+H ++V F+ +I    ++     
Sbjct: 461 QGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 520

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              +  L     ++PD + Y+ +M+ +   G M+K   +FD M  AGI+P+   Y  L  
Sbjct: 521 AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVN 580

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           GY +    ++   L   M++ G  P+ ++++ II G    G    A   F +M E G++ 
Sbjct: 581 GYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAM 640

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           ++ T+  ++ G  + R    A  + + ++A  V     T   + +    T   +EAK + 
Sbjct: 641 DICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLF 700

Query: 517 SKI 519
           + I
Sbjct: 701 ASI 703



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 107/436 (24%), Positives = 207/436 (47%), Gaps = 1/436 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+ +EA  +F  +      P +VT + L+ +L    +      +   +   G +PD   +
Sbjct: 306 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 365

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++N ++  G + +  D F  M   G+ P   T+N LIK Y   G  ++++ + + M R
Sbjct: 366 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEM-R 424

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +  VKP++ TY  ++ A C    + +A    ++M   G+ PD   YN +   +  +G   
Sbjct: 425 DHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLL 484

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A+E+I E+ +NG+  +      II+  CK G++ +A          G+HP+ V++N+L+
Sbjct: 485 KAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 544

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G+  +   +    V   M    + P+V+ Y T++N +   G +D+   +F +M + GIK
Sbjct: 545 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIK 604

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P    YSI+  G         A+     M ESG   ++  +  ++ G   +   D AI +
Sbjct: 605 PSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFL 664

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F ++    V  N+ T  T++ G  + R+   A+++   +    + P   T+ ++      
Sbjct: 665 FKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIK 724

Query: 506 TGLTKEAKRILSKIKN 521
            GL +EA+ + S ++N
Sbjct: 725 EGLVEEAEDMFSSMQN 740



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 209/423 (49%), Gaps = 7/423 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +++ LM SL + GK +EA+ +F+ +   G  P + +Y  +L     +     +  +  
Sbjct: 327 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFD 386

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G+ PD   FN +I A++  G +++AM  F +M++ G+ P   TY T+I      G
Sbjct: 387 LMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 446

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +++++  + M  +G V P+   YN L++ +C   ++ +A  ++ ++  +GM  D+V +
Sbjct: 447 KMDDAMEKFNQMIDQG-VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 505

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           ++I     + G    A+ +     + G+ P+     +++ GYC  GK+++ALR    M  
Sbjct: 506 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 565

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            G+ PN+V +  L+ G+ +I     +DE L+L +E     + P  I YS I++    AG 
Sbjct: 566 AGIEPNVVGYGTLVNGYCKI---GRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGR 622

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
               K  F +M ++GI  D   Y+I+ +G  + +  ++A  L   +       N++   T
Sbjct: 623 TVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 682

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G      ++ A ++F  +    + P++ T+  ++    +      AE++   M+  G
Sbjct: 683 MIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 742

Query: 489 VHP 491
             P
Sbjct: 743 CEP 745



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 198/444 (44%), Gaps = 42/444 (9%)

Query: 85  RGKPQEAQAIFNNLIEGGHKPSLV-----TYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           R  P  A A+FN        P ++     TY  L+   T   R     +   Q+   G+ 
Sbjct: 87  RSGPALAVALFNRAASRAQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLR 146

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            + I  N ++  F E+   +EA+D    +  E G  P   +Y+ L+K     GK  ++  
Sbjct: 147 VNIIIANHLLEGFCEAKRTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADD 206

Query: 199 LLDLMSREGNV-KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           LL +M+  G V  PN+  YN ++  +  E ++ +A ++  +M   G+ PD+VTYN++  A
Sbjct: 207 LLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHA 266

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+AE  + +M +  V PN  T   +I GY   G+ KEA+R  + M+ + + P 
Sbjct: 267 LCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILP- 325

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
                                             DV+T S +M +    G + + +++FD
Sbjct: 326 ----------------------------------DVVTLSMLMGSLCKYGKIKEARDVFD 351

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G  PD  +Y+I+  GY  +       +L   M+  G  P+   F  +I  + + G
Sbjct: 352 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 411

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D+A+ +F++M +HGV P++ T+ T++       +   A E    M   GV P K  + 
Sbjct: 412 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 471

Query: 498 LLAEARRATGLTKEAKRILSKIKN 521
            L +     G   +AK ++S+I N
Sbjct: 472 CLIQGFCTHGSLLKAKELISEIMN 495



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 91/373 (24%), Positives = 180/373 (48%), Gaps = 7/373 (1%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   +A  IFN + + G KP +VTY T++AAL    + +      +Q+ + G+ PD   +
Sbjct: 411 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 470

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +I  F   G++ +A +   ++  +G+      ++++I      G+  ++  + DL   
Sbjct: 471 NCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 530

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G + P+   YN+L+  +C    + +A  V   M ++G++P+VV Y T+   Y + G  D
Sbjct: 531 VG-LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 589

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +   +  EM   G++P+     III G  + G+   A      M E G+  ++  +N+++
Sbjct: 590 EGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVL 649

Query: 326 KGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +G  +       DE + L KE R   V  ++IT +T+++       +++ K++F  + ++
Sbjct: 650 RGLFK---NRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRS 706

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
            + P    YSI+    ++E   E+AE++  +M  +G  PN  +   ++        + RA
Sbjct: 707 RLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRA 766

Query: 443 IEVFDKMCEHGVS 455
                K+ E   S
Sbjct: 767 GAYLSKIDERNFS 779



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/251 (22%), Positives = 125/251 (49%), Gaps = 1/251 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + ++N+L + G+  +AQ IF+  +  G  P  V Y  L+    +  +      +   +  
Sbjct: 506 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 565

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++P+ + +  ++N + + G ++E +  F +M + G+ P+T  Y+ +I G   AG+   
Sbjct: 566 AGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVP 625

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +      M+  G +  ++ TYN+++R     +   EA  +  ++ A  +K +++T NT+ 
Sbjct: 626 AKMKFHEMTESG-IAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 684

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               Q    ++A+++   +  + + P+  T  I+I+   KEG ++EA     +M+  G  
Sbjct: 685 DGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 744

Query: 316 PNLVIFNLLIK 326
           PN  + N +++
Sbjct: 745 PNSRLLNHVVR 755



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 62/247 (25%), Positives = 114/247 (46%), Gaps = 3/247 (1%)

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD-GV 337
           + P   T  I++    +  + + AL F   +   G+  N++I N L++GF E    D  +
Sbjct: 110 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEAL 169

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG--IKPDAHAYSILA 395
           D +L    E    PDV +YS ++ +    G   +  ++   M + G    P+  AY+ + 
Sbjct: 170 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVI 229

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G+ +E +  KA +L   M++ G  P++V + +++   C   +MD+A     +M    V 
Sbjct: 230 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 289

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           PN  T+  L++GYS   Q   A  + + M+   + P   T  +L  +    G  KEA+ +
Sbjct: 290 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 349

Query: 516 LSKIKNK 522
              +  K
Sbjct: 350 FDTMAMK 356


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  195 bits (496), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 219/437 (50%), Gaps = 4/437 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   ++G+ + A  +F  L   G  P+L T+ +L+        F +I  ++ ++++ G
Sbjct: 249 LIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLLLLEMKDRG 308

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  +   +N +I+A  + G   +A DT  +M E+   P   TYNTLI  +   G+ EE+ 
Sbjct: 309 LSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAE 368

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL+   R G + PN  TY  LV  +C +   T+A + + +M+ SG++ D+++Y  +   
Sbjct: 369 KLLEQTIRRG-LAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHG 427

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               GE D A  +   M + G+ P+     ++++G  K+GK+  A      M +  + P+
Sbjct: 428 LVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPD 487

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             ++  L+ GF+   + D   ++  L+ E  ++P V+ Y+ ++  +S +G MD      D
Sbjct: 488 AFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCID 547

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M +A   PD   +S +  GYV++       ++   M++    PNVV +T++I+G+C  G
Sbjct: 548 KMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKG 607

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
               A ++F  M  HG+ P++ T+  L+  + +  +  +A    ++M      P  + F 
Sbjct: 608 ETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFH 667

Query: 498 LLAEA---RRATGLTKE 511
            L       +AT +++E
Sbjct: 668 YLVNGFTNTKATAVSRE 684



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 218/448 (48%), Gaps = 5/448 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIE--GGHKPSLVTYTT--LLAALTIQKRFNSIHSIMSQV 133
           L+N L++  + + A  +++ +I+   G    +  YTT  ++  L ++ R      ++   
Sbjct: 175 LLNLLVKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESR 234

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P+ +F+N +I+ + + G +E A   F K+K  G  PT  T+ +L+ G+   G  
Sbjct: 235 WGKGCVPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGM- 293

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E++ LL L  ++  +  N++ YN ++ A        +A + + +M+ +  +PD+VTYNT
Sbjct: 294 FEAIDLLLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNT 353

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +   GE ++AE+++ +    G+ PN  T   ++ GYCK+G+  +A  +   M   G
Sbjct: 354 LINHFCSRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSG 413

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           +  +++ +  LI G V   + D    +   M    + PD   Y+ +MN     G +   K
Sbjct: 414 LEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAK 473

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +  +M    I PDA  Y+ L  G++R    ++A++L   +IE G  P VV +  +I G+
Sbjct: 474 VMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGF 533

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G MD AI   DKM      P++ TF T++ GY +        +I  +M      P  
Sbjct: 534 SKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNV 593

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKN 521
            T+  L       G TK A+++ S +++
Sbjct: 594 VTYTSLINGYCRKGETKMAEKLFSMMRS 621



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 99/460 (21%), Positives = 206/460 (44%), Gaps = 15/460 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V+    ++++  + G   +A+     + E   +P LVTY TL+     +        ++ 
Sbjct: 313 VQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCSRGEVEEAEKLLE 372

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q    G+ P+ + +  +++ + + G   +A D   +M  SGL     +Y  LI G  +AG
Sbjct: 373 QTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMISYGALIHGLVVAG 432

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + ++ + D M   G + P+   YNVL+     +  ++ A  ++ +M    + PD   Y
Sbjct: 433 EVDTALTIRDRMMNRG-ILPDANIYNVLMNGLFKKGKLSMAKVMLTEMLDQNIAPDAFVY 491

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   + ++G  D+A+++   +   G+ P      ++I G+ K G +  A+     M+ 
Sbjct: 492 ATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMDNAILCIDKMRR 551

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
               P++  F+ +I G+V+  + + V ++  LM +    P+V+TY++++N +   G    
Sbjct: 552 AHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLINGYCRKGETKM 611

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +++F  M   G+KP    YSIL   + +E +  KA      M+ +   PN   F  +++
Sbjct: 612 AEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCTPNDAAFHYLVN 671

Query: 432 GWCS--------------DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G+ +              + S     + F +M   G +     +  ++    + R    A
Sbjct: 672 GFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGWTQKAAAYNCILICLCQQRMVKTA 731

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
            ++   M AFG+     +F+ L       G +KE + ++S
Sbjct: 732 LQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKEWRNMIS 771



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 159/360 (44%), Gaps = 9/360 (2%)

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
           T  +MK     PT    + ++  Y   G  ++++++   + +  N  P+    N L+   
Sbjct: 120 TLEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLL 179

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN----GEADQAEEVIVEMEHNGV 279
              + I  A  +  +M       D+   N   +   +     G  +   ++I      G 
Sbjct: 180 VKHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGC 239

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            PN      +I GYCK+G+++ A +  + +K  G  P L  F  L+ GF ++   + +D 
Sbjct: 240 VPNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDL 299

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +L  MK+  ++ +V  Y+ I++A    GF  K K+   +M +   +PD   Y+ L   + 
Sbjct: 300 LLLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFC 359

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
              E E+AE+LL   I  G  PN + +T ++ G+C  G   +A +   +M   G+  ++ 
Sbjct: 360 SRGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMI 419

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           ++  L+ G   A +   A  I   M   G+ P  + + +L       GL K+ K  ++K+
Sbjct: 420 SYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVL-----MNGLFKKGKLSMAKV 474


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 125/503 (24%), Positives = 238/503 (47%), Gaps = 23/503 (4%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ S   +MN L+E G   +A  ++  +   G  P + T+T  + +    KR  +   ++
Sbjct: 110 SIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLL 169

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + +   G + +++ +  VI+ F E     EA + F KM   G+ P  +T+N L+      
Sbjct: 170 NNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKK 229

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE-------KNITEAWNVMHKMAASG 243
           G  +E  KLL+ + + G V PNL T+N+ ++  C +         + EA N +HKM   G
Sbjct: 230 GHLQEGEKLLNKVLKNG-VCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKG 288

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++PD  TYNTI   Y++ G+   A  ++ + +  G  P+  T   +I G C++G I  AL
Sbjct: 289 LEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHAL 348

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIM 360
                    G+ P++V++N LIKG  +   +  V + L LM +     ++PD+ TY+ ++
Sbjct: 349 ALFEEALGKGLKPSIVLYNTLIKGLSQ---QGLVLKALQLMNDMSKEGMSPDIWTYNLVI 405

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           N     G +     + +     G  PD   ++ L  GY +  + + A  +L +M   G  
Sbjct: 406 NGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVT 465

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+V+ + +I++G C     +  +E F  + E G  PN+ T+  L+    +AR+   A ++
Sbjct: 466 PDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDL 525

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESL- 539
           L+ ++  G+ P   +F  +       G   EA ++  +++ + R     A  +I + +  
Sbjct: 526 LEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFS 585

Query: 540 --------ERLYHKEATTASYPN 554
                   ++L+H+       P+
Sbjct: 586 EKLDMDMAQKLFHEMGDKGCDPD 608



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 216/449 (48%), Gaps = 16/449 (3%)

Query: 85  RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
           +GK QEA  +F  +     +PS+ +Y  ++  L     FN  H +  +++  G+ PD   
Sbjct: 89  KGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCT 148

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           F   I +F  +     A+     M   G       Y T+I G+       E+ +L + M 
Sbjct: 149 FTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKML 208

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G + P++ T+N L+   C + ++ E   +++K+  +G+ P++ T+N       + G  
Sbjct: 209 RLG-IFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVL 267

Query: 265 DQAEEVIVEMEH-------NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + A   +VE E+        G++P+  T   II GY K GKI++A R  +  K  G  P+
Sbjct: 268 EGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPD 327

Query: 318 LVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCK 373
              +  LI G  +    DG +D  LAL +E     + P ++ Y+T++   S  G + K  
Sbjct: 328 EFTYCSLIIGVCQ----DGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKAL 383

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           ++ +DM K G+ PD   Y+++  G  +      A  LL   I  G+ P++  F T+I G+
Sbjct: 384 QLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGY 443

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C    MD AI + D M  HGV+P++ T+ +++ G  +A +P    E  +++   G  P  
Sbjct: 444 CKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNI 503

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK 522
            T+ +L E+        EA  +L +I+N+
Sbjct: 504 ITYNILIESLCKARKVTEALDLLEEIRNR 532



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 137/536 (25%), Positives = 240/536 (44%), Gaps = 32/536 (5%)

Query: 2   GKFAEGKAFLQTDDKYQSGSTIVKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCS 61
           GK  E     +  D Y    +I        I  +     +  ++Y   K     P   C+
Sbjct: 90  GKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDV-CT 148

Query: 62  FCMN-KESCRTVRSMTKL------------MNSLI---------ERGKPQEAQAIFNNLI 99
           F +  K  CRT R +  L            +N+++         E     EA  +FN ++
Sbjct: 149 FTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKML 208

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNME 159
             G  P + T+  L+  L  +        ++++V +NG+ P+   FN  I      G +E
Sbjct: 209 RLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLE 268

Query: 160 -------EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
                  EA +   KM   GL P   TYNT+I GY   GK +++ ++L     +G V P+
Sbjct: 269 GANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFV-PD 327

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
             TY  L+   C + +I  A  +  +    G+KP +V YNT+    +Q G   +A +++ 
Sbjct: 328 EFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMN 387

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           +M   G+ P+  T  ++I+G CK G + +A          G  P++  FN LI G+ + +
Sbjct: 388 DMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRL 447

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
             D    +L  M    V PDVITY++I+N    A   +   E F  + + G  P+   Y+
Sbjct: 448 KMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYN 507

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM-CE 451
           IL +   + ++  +A +LL  +   G  P+ V F T+ISG+C++G +D A ++F +M  +
Sbjct: 508 ILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQ 567

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           + +   + T+  ++  +SE      A+++   M   G  P   T+ ++ +     G
Sbjct: 568 YRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVG 623



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 193/406 (47%), Gaps = 37/406 (9%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  EA+   + ++  G +P   TY T++   +   +      I+   +  G  PD   + 
Sbjct: 273 KVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYC 332

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           ++I    + G+++ A+  F +    GL P+   YNTLIKG    G   ++++L++ MS+E
Sbjct: 333 SLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKE 392

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G + P++ TYN+++   C    +++A N+++   A G  PD+ T+NT+   Y +  + D 
Sbjct: 393 G-MSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDN 451

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  ++  M  +GV P+  T   I++G CK  K ++ +   + + E G  PN++ +N+LI+
Sbjct: 452 AIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIE 511

Query: 327 GFV-------------EIMDRD-------------------GVDEVLALMK----EFRVN 350
                           EI +R                     +DE   L +    ++R+ 
Sbjct: 512 SLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRIC 571

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
             V TY+ ++NA+S    MD  +++F +MG  G  PD++ Y ++  G+ +        + 
Sbjct: 572 HTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDF 631

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           L+  IE GF P++  F  +I+  C    +  A+ +   M   GV P
Sbjct: 632 LLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVP 677



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/393 (23%), Positives = 167/393 (42%), Gaps = 46/393 (11%)

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR--TYNVLVRAWCNE 226
           KE G   T  TY  +I+  G  G+ +   ++L  M    NV  +L    Y   +R +  +
Sbjct: 32  KEDGFKHTFLTYKRMIEKLGFHGEFDAMERVL--MEMRLNVDNSLLEGVYVSAMRNYGRK 89

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
             + EA +V  +M     +P + +YN I     + G  +QA +V + M+H G+ P+  T 
Sbjct: 90  GKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVCTF 149

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
            I I  +C+  +   ALR    M   G   N V++  +I GF E   +    E+   M  
Sbjct: 150 TIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKMLR 209

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE- 405
             + P + T++ +M+     G + + +++ + + K G+ P+   ++I  +G  R+   E 
Sbjct: 210 LGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVLEG 269

Query: 406 ------KAEELLMTMIESGFHPNVVIFTTIISGW-------------------------- 433
                 +AE  L  M+  G  P+   + TII G+                          
Sbjct: 270 ANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEF 329

Query: 434 ---------CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
                    C DG +D A+ +F++    G+ P++  + TL+ G S+     +A +++  M
Sbjct: 330 TYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDM 389

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
              G+ P   T+ L+       G   +A  +L+
Sbjct: 390 SKEGMSPDIWTYNLVINGLCKMGCVSDANNLLN 422



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/249 (22%), Positives = 118/249 (47%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   L++   +R K   A  I +++   G  P ++TY ++L  L    +   +     
Sbjct: 433 IFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFK 492

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + E G  P+ I +N +I +  ++  + EA+D   +++  GL P   ++ T+I G+   G
Sbjct: 493 MIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNG 552

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+ +L   M ++  +   + TYN+++ A+  + ++  A  + H+M   G  PD  TY
Sbjct: 553 DLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTY 612

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +   + + G  +   + +++    G  P+  T G +I+  C + ++ EA+     M  
Sbjct: 613 RVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVR 672

Query: 312 YGVHPNLVI 320
            GV P  V+
Sbjct: 673 TGVVPEAVV 681



 Score = 42.0 bits (97), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 44/107 (41%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C TV +   ++N+  E+     AQ +F+ + + G  P   TY  ++         NS + 
Sbjct: 571 CHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYD 630

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTP 175
            + +  E G  P    F  VIN       + EA+     M  +G+ P
Sbjct: 631 FLLKEIEIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMVRTGVVP 677


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 221/431 (51%), Gaps = 1/431 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ + ++ G+   A   F+   + G + S ++   +L +L  + R   + S+  ++    
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  + + F+ VIN   + G  ++A D    MK  G +P+  TYNT+I GY  AGK  ++ 
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M  +  + PN  T+N+L+  +C ++N+T A  V  +M   G++P+VVTYN++   
Sbjct: 285 ALLKEMVAK-RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLING 343

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
              NG+ D+A  +  +M   G++PN  T   +I+G+CK+  +KEA      + + G+ PN
Sbjct: 344 LCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPN 403

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ FN LI  + +    D    + ++M +  V P+V TY+ ++  +   G + + +++  
Sbjct: 404 VITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G+K D   Y+IL     ++ E  KA  LL  M E G +P+ + +  +I G+  +G
Sbjct: 464 EMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREG 523

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
           +   A+ V   M + G   N+ T+  L+ G+    +   A  +L  M   G+ P ++T+ 
Sbjct: 524 NSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYD 583

Query: 498 LLAEARRATGL 508
           +L +     G 
Sbjct: 584 ILRDEMMEKGF 594



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/435 (23%), Positives = 206/435 (47%), Gaps = 24/435 (5%)

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV-----------------INAF 152
           +  LL  L   K +N I +++    +N    +S  F+++                 + A+
Sbjct: 110 FCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSVLGSWGCANSIIVDMLVWAY 169

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
            ++G M+ A++ F +  + G   +  + N ++      G+      +   M R   +  N
Sbjct: 170 VKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRR-RIGVN 228

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
           + T++V++   C      +A +V+  M A G  P V+TYNTI   Y + G+  +A+ ++ 
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           EM    + PN  T  I+I G+C++  +  A +    M+  G+ PN+V +N LI G   + 
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLING---LC 345

Query: 333 DRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
               +DE L L   M    + P+V+TY+ ++N +     + + +E+ DD+GK G+ P+  
Sbjct: 346 SNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVI 405

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            ++ L   Y +    + A  L   M+++G  PNV  +  +I G+C +G++  A ++  +M
Sbjct: 406 TFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEM 465

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
             +G+  +L T+  L+    +  +  +A  +L  M   G++P   T+  L +     G +
Sbjct: 466 EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNS 525

Query: 510 KEAKRILSKIKNKER 524
             A  + + ++ K R
Sbjct: 526 TAALNVRTLMEKKGR 540



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 148/279 (53%), Gaps = 1/279 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+ +F  +   G +P++VTY +L+  L    + +    +  ++   G+ P+ + +NA+IN
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            F +   ++EA +    + + GL P   T+NTLI  YG AG+ +++  L  +M   G V 
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTG-VC 436

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN+ TYN L+  +C E N+ EA  +  +M  +G+K D+VTYN +  A  + GE  +A  +
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + EM   G+ P+  T   +I GY +EG    AL     M++ G   N+V +N+LIKGF  
Sbjct: 497 LDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCN 556

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
               +  + +L  M E  + P+  TY  + +     GF+
Sbjct: 557 KGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 595



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 160/333 (48%), Gaps = 13/333 (3%)

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN---VLVRAWCNEKNITEAWNVMHKMAA 241
           K +G     E+  +LL L++       N + YN    L+ ++    + + +  + H ++ 
Sbjct: 99  KEFGAIHNVEQFCRLLHLLA-------NAKNYNKIRALLDSFAKNAHYSNS-TIFHSLSV 150

Query: 242 SGM--KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
            G     + +  + +  AY +NGE D A E        G + +  +C  ++    KEG+I
Sbjct: 151 LGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRI 210

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
                  + M    +  N+V F+++I G  ++       +V+  MK +  +P VITY+TI
Sbjct: 211 GVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTI 270

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++ +  AG M K   +  +M    I P+   ++IL  G+ R++    A+++   M   G 
Sbjct: 271 IDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGL 330

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            PNVV + ++I+G CS+G +D A+ + DKM   G+ PN+ T+  L+ G+ + +    A E
Sbjct: 331 QPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEARE 390

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           +L  +   G+ P   TF  L +A    G   +A
Sbjct: 391 MLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/254 (29%), Positives = 117/254 (46%), Gaps = 38/254 (14%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N L   GK  EA  + + +   G KP++VTY  L+     +K       ++ 
Sbjct: 334 VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G+ P+ I FN +I+A+ ++G M++A      M ++G+ P  STYN LI G+   G
Sbjct: 394 DIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREG 453

Query: 192 KPEESVKLLDLMSREGN-VKPNLRTYNVLVRAWC-------------------------- 224
             +E+ KL   M  EGN +K +L TYN+LV A C                          
Sbjct: 454 NVKEARKLAKEM--EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLT 511

Query: 225 ---------NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
                     E N T A NV   M   G + ++VTYN +   +   G+ ++A  ++ EM 
Sbjct: 512 YNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEML 571

Query: 276 HNGVQPNGRTCGII 289
             G+ PN  T  I+
Sbjct: 572 EKGLIPNRTTYDIL 585


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 228/472 (48%), Gaps = 15/472 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++SL +  +  EA  +   +   G  P   T+  ++  L    R N    +++++   G
Sbjct: 258 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 317

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD I +  ++N   + G ++ A D F+++ +    P    +NTLI G+   G+ +++ 
Sbjct: 318 FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVIFNTLIHGFVTHGRLDDAK 373

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L  M     + P++ TYN L+  +  E  +  A  V+H M   G KP+V +Y  +   
Sbjct: 374 AVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDG 433

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G+ D+A  V+ EM  +G++PN      +IS +CKE +I EA+   R M   G  P+
Sbjct: 434 FCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 493

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKE 374
           +  FN LI G  E+   D +   L L+++     V  + +TY+T++NA+   G + + ++
Sbjct: 494 VYTFNSLISGLCEV---DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 550

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + ++M   G   D   Y+ L KG  R  E +KA  L   M+  G  P+ +    +I+G C
Sbjct: 551 LVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLC 610

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G ++ A+E   +M   G +P++ TF +L+ G   A +      + + ++A G+ P   
Sbjct: 611 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 670

Query: 495 TFLLLAEARRATGLTKEAKRILSK-----IKNKERTNEMEAEEDIPVESLER 541
           TF  L       G   +A  +L +          RT  +  +  IP E+L+R
Sbjct: 671 TFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLDR 722



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/458 (24%), Positives = 207/458 (45%), Gaps = 44/458 (9%)

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM--------------------- 138
           + G++ S   Y  L+  L     F +I  ++ Q+++ G+                     
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPG 163

Query: 139 ---------------DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                          +P    +N V+         + A + F+ M    + PT  T+  +
Sbjct: 164 QTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVV 223

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           +K +    + + ++ LL  M++ G V PN   Y  L+ +      + EA  ++ +M   G
Sbjct: 224 MKAFCAVNEIDSALSLLRDMTKHGCV-PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             PD  T+N +     +    ++A +++  M   G  P+  T G +++G CK G++  A 
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAK 342

Query: 304 R-FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA-LMKEFRVNPDVITYSTIMN 361
             F R  K     P +VIFN LI GFV     D    VL+ ++  + + PDV TY++++ 
Sbjct: 343 DLFYRIPK-----PEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIY 397

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +   G +    E+  DM   G KP+ ++Y+IL  G+ +  + ++A  +L  M   G  P
Sbjct: 398 GYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKP 457

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           N V F  +IS +C +  +  A+E+F +M   G  P++ TF +L+ G  E  +   A  +L
Sbjct: 458 NTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLL 517

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           + M + GV     T+  L  A    G  KEA+++++++
Sbjct: 518 RDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEM 555



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 213/450 (47%), Gaps = 7/450 (1%)

Query: 65  NKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           N  SC  T +S   ++  L+     + A  +F +++     P+L T+  ++ A       
Sbjct: 174 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEI 233

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +S  S++  + ++G  P+S+ +  +I++ S+   + EA+    +M   G  P   T+N +
Sbjct: 234 DSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 293

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G     +  E+ K+++ M   G   P+  TY  L+   C    +  A ++ +++    
Sbjct: 294 ILGLCKFDRINEAAKMVNRMLIRG-FAPDDITYGYLMNGLCKIGRVDAAKDLFYRIP--- 349

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN-GVQPNGRTCGIIISGYCKEGKIKEA 302
            KP++V +NT+   +  +G  D A+ V+ +M  + G+ P+  T   +I GY KEG +  A
Sbjct: 350 -KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLA 408

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L     M+  G  PN+  + +L+ GF ++   D    VL  M    + P+ + ++ +++A
Sbjct: 409 LEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISA 468

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +     + +  EIF +M + G KPD + ++ L  G     E + A  LL  MI  G   N
Sbjct: 469 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 528

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            V + T+I+ +   G +  A ++ ++M   G   +  T+ +L+ G   A +  +A  + +
Sbjct: 529 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFE 588

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            M   G  P   +  +L      +G+ +EA
Sbjct: 589 KMLRDGHAPSNISCNILINGLCRSGMVEEA 618



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 110/228 (48%), Gaps = 2/228 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C+  V +   L++ L E  + + A  +  ++I  G   + VTY TL+ A   +  
Sbjct: 485 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 544

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +++++   G   D I +N++I     +G +++A   F KM   G  P+  + N 
Sbjct: 545 IKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNI 604

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G   +G  EE+V+    M   G+  P++ T+N L+   C    I +   +  K+ A 
Sbjct: 605 LINGLCRSGMVEEAVEFQKEMVLRGST-PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 663

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
           G+ PD VT+NT+ +   + G    A  ++ E   +G  PN RT  I++
Sbjct: 664 GIPPDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILL 711



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/253 (21%), Positives = 101/253 (39%), Gaps = 9/253 (3%)

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
            NG + +     ++I      G+ K   R    MK+ G+     +F  +++ +    D+ 
Sbjct: 104 QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDY----DKA 159

Query: 336 GV-DEVLALMKEFR----VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           G   +   LM E R      P   +Y+ ++    +         +F DM    I P    
Sbjct: 160 GFPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 219

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           + ++ K +    E + A  LL  M + G  PN VI+ T+I        ++ A+++ ++M 
Sbjct: 220 FGVVMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 279

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
             G  P+ +TF  ++ G  +  +   A +++  M   G  P   T+  L       G   
Sbjct: 280 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVD 339

Query: 511 EAKRILSKIKNKE 523
            AK +  +I   E
Sbjct: 340 AAKDLFYRIPKPE 352


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 97/348 (27%), Positives = 188/348 (54%), Gaps = 1/348 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S++ L+N      +     ++ + +++ G +PS+VT+TTLL  L ++ + + +  +  
Sbjct: 97  IHSLSILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYD 156

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ P+   +N +IN+ S+SG   EA+    +M++ G  P    Y+TLI GY + G
Sbjct: 157 DMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRG 216

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+  + DLM  +G   PN+ TY  L+  +C  + I EA  ++ +    G+ PD+VT+
Sbjct: 217 QMDEARSVFDLMVSKG-CTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTF 275

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            TI +   + G    A+++   +  +G  PN  T G+++ G CK G ++EA    + M+ 
Sbjct: 276 TTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQR 335

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             V PNLVI+ +LI    +        E+ + + +  + P+V TY+ ++ A    G + +
Sbjct: 336 STVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIE 395

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
             ++F  M + G  PD  AY+++ +G+++ ++P  A +L+  M+  GF
Sbjct: 396 AHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGF 443



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 106/416 (25%), Positives = 204/416 (49%), Gaps = 13/416 (3%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A A F  ++     P +V ++ L +++     + ++  +  ++E  G++ D    + +I
Sbjct: 45  DALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILI 104

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N F     ++  +    K+ + GL P+  T+ TL+ G  + GK ++ + L D M   G +
Sbjct: 105 NCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRG-L 163

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +PN+ TYNV++ +        EA   + +M   G  P+VV Y+T+   Y   G+ D+A  
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           V   M   G  PN  T   +++GYCK  +I+EA++        G+ P++V F  +I G  
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 330 EIMDRDGVDEVLALMKEFRV------NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
               R G    LA  + FR        P+++TY  +++     G +++   +F +M ++ 
Sbjct: 284 ----RAG--RPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRST 337

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           +KP+   Y+IL     +  + +  +EL   +I+ G  PNV  +T ++   C +G +  A 
Sbjct: 338 VKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAH 397

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           ++F KM E G +P+   +  ++ G+ + + P  A ++++ M   G     +T  LL
Sbjct: 398 KLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATRALL 453



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 89/362 (24%), Positives = 170/362 (46%), Gaps = 1/362 (0%)

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
           ++A+ +F  M      P    ++ L       G  E  V L   +   G ++ ++ + ++
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLG-IEQDIHSLSI 102

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L+  +C+   +    +V+ K+   G++P +VT+ T+       G+ DQ   +  +M   G
Sbjct: 103 LINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRG 162

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           +QPN  T  +II+   K GK  EAL F + M++ G  PN+V ++ LI G+      D   
Sbjct: 163 LQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEAR 222

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            V  LM      P+V TY+++MN +     +++  ++ D+  + G+ PD   ++ +  G 
Sbjct: 223 SVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGL 282

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            R   P  A++L   +   G  PN++ +  ++ G C  G+++ A  +F +M    V PNL
Sbjct: 283 CRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNL 342

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
             +  L+    +  +    +E+   +   G+ P   T+  L  A    GL  EA ++  K
Sbjct: 343 VIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRK 402

Query: 519 IK 520
           ++
Sbjct: 403 ME 404



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/297 (26%), Positives = 144/297 (48%), Gaps = 34/297 (11%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ + T L+N L   GK  +   ++++++  G +P++ TY  ++ +L+   + N     +
Sbjct: 131 SIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFL 190

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            Q+E+ G  P+ + ++ +I+ +   G M+EA   F  M   G TP   TY +L+ GY   
Sbjct: 191 KQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKI 250

Query: 191 GKPEESVKLLDLMSREGNV----------------------------------KPNLRTY 216
            + EE+V+LLD   R+G V                                   PN+ TY
Sbjct: 251 ERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTY 310

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
            VL+   C   N+ EA+ +  +M  S +KP++V Y  +  +  + G+    +E+   +  
Sbjct: 311 GVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLID 370

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
            G++PN  T   ++   CKEG I EA +  R M+E G  P+   +N++I+GF++  D
Sbjct: 371 EGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKD 427



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 103/214 (48%), Gaps = 1/214 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T LMN   +  + +EA  + +  +  G  P +VT+TT+++ L    R  +   +  
Sbjct: 237 VYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFR 296

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G  P+ + +  +++   + GN+EEA   F +M+ S + P    Y  LI      G
Sbjct: 297 YICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCG 356

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K ++  +L   +  EG +KPN+ TY  LV A C E  I EA  +  KM   G  PD   Y
Sbjct: 357 KIKDGKELFSRLIDEG-LKPNVYTYTALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAY 415

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
           N I   + Q+ +   A +++ EM + G   +  T
Sbjct: 416 NVIIQGFLQHKDPSMARQLVEEMVNRGFSADAAT 449



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/190 (22%), Positives = 89/190 (46%)

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           D+D       LM   +  P ++ +S + ++    G  +    +  ++   GI+ D H+ S
Sbjct: 42  DKDDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLS 101

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           IL   +      +    +L  +++ G  P++V FTT+++G C +G MD+ + ++D M   
Sbjct: 102 ILINCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVR 161

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G+ PN+ T+  ++   S++ +   A   L+ M+  G  P    +  L +     G   EA
Sbjct: 162 GLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEA 221

Query: 513 KRILSKIKNK 522
           + +   + +K
Sbjct: 222 RSVFDLMVSK 231


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 214/442 (48%), Gaps = 1/442 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L + GK +EA A+F +    G     V YTTL+  L       +      ++ +  
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M PD++ +N  IN     G  +EA     +M+  GL P  STYNT+I  +   G+  +++
Sbjct: 550 MLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL  M +  ++KPNL TYN LV        + +A  ++++M ++G  P  +T+  +  A
Sbjct: 610 KLLHEM-KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            +Q+   D   ++   M + G+  +      ++   C  G  ++A      M   G+ P+
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + FN LI G  +    D      A M    ++P++ T++T++    + G + +   +  
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K+G++P+   Y ILA G+ ++    +A  L   M+  GF P V  +  +IS +   G
Sbjct: 789 EMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M +A E+F  M + GV P   T++ L+ G+S  R     ++ L+ MK  G  P K T  
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908

Query: 498 LLAEARRATGLTKEAKRILSKI 519
            +  A    G+T +A+R+L  +
Sbjct: 909 FICRAFSKPGMTWQAQRLLKNL 930



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/482 (25%), Positives = 209/482 (43%), Gaps = 36/482 (7%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T LM+ L ++GK  E +      +     P+ VTYT L+ AL      +    ++ ++EE
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY-------- 187
             + P+ + F++VIN F + G +++A +    MKE G+ P   TY TLI G+        
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 188 -----------GIA----------------GKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
                      G+                 GK EE++ L    S  G +  +   Y  L+
Sbjct: 468 ALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG-LSLDHVNYTTLI 526

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
                  ++  A+    ++    M PD V YN         G+  +A+  + EM + G++
Sbjct: 527 DGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLK 586

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+  T   +I  +C++G+  +AL+    MK   + PNL+ +N L+ G       +    +
Sbjct: 587 PDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L  M     +P  +T+  ++ A S +  +D   +I + M  AG+  D   Y+ L +    
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
                KA  +L  M+ SG  P+ + F  +I G C    +D A   + +M    +SPN+ T
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           F TL+ G     +   A  +L  M+  G+ P   T+ +LA          EA R+  ++ 
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMV 826

Query: 521 NK 522
            K
Sbjct: 827 GK 828



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 201/444 (45%), Gaps = 5/444 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+      G+   A+ + + + E G  P++ TYT  +      K       +   +  NG
Sbjct: 210 LVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNG 269

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D +  +A++      G   EA   F +M + G  P   TY TLI     AG+ +E +
Sbjct: 270 VLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELL 329

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M   G V  +L TY  L+     +    E  + +    +  + P+ VTY  +  A
Sbjct: 330 SLLGEMVSRGVVM-DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDA 388

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+AE+V++EME   + PN  T   +I+G+ K G + +A  + R MKE G++PN
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVL--ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           +V +  LI GF +   +D   EV    L +  +VN  ++   +++N     G +++   +
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIV--DSLVNGLRQNGKIEEAMAL 506

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F D   +G+  D   Y+ L  G  +  +   A +    +++    P+ V++   I+  C 
Sbjct: 507 FKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCM 566

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G    A     +M   G+ P+  T+ T++  +    +  +A ++L  MK   + P   T
Sbjct: 567 LGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLIT 626

Query: 496 FLLLAEARRATGLTKEAKRILSKI 519
           +  L      TG  ++AK +L+++
Sbjct: 627 YNTLVAGLFGTGAVEKAKYLLNEM 650



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 213/448 (47%), Gaps = 1/448 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +++ L+  L   G+  EA A+F  + + G  P+ VTY TL+ +L    R   + S++ 
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+  D + + A+++   + G  +E  DT        L+P   TY  LI     A 
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCKAH 393

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+ ++L L   E ++ PN+ T++ ++  +     + +A      M   G+ P+VVTY
Sbjct: 394 NVDEAEQVL-LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   + +    D A EV  +M   GV+ N      +++G  + GKI+EA+   +    
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  + V +  LI G  +  D     +    + +  + PD + Y+  +N     G   +
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKE 572

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            K    +M   G+KPD   Y+ +   + R+ E  KA +LL  M  S   PN++ + T+++
Sbjct: 573 AKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G    G++++A  + ++M   G SP+  T   ++   S++R+     +I + M   G+H 
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
             + +  L +     G+T++A  +L ++
Sbjct: 693 DITVYNTLLQVLCYHGMTRKATVVLEEM 720



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 212/472 (44%), Gaps = 4/472 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + ++N  ++RG   +A      + E G  P++VTY TL+      +  ++   +  
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYH 473

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+  +    ++++N   ++G +EEAM  F     SGL+     Y TLI G   AG
Sbjct: 474 DMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533

Query: 192 KPEESVKL-LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
               + K   +LM R  N+ P+   YNV +   C      EA + + +M   G+KPD  T
Sbjct: 534 DMPTAFKFGQELMDR--NMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQST 591

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+  ++ + GE  +A +++ EM+ + ++PN  T   +++G    G +++A      M 
Sbjct: 592 YNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMV 651

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  P+ +    +++   +    D + ++   M    ++ D+  Y+T++      G   
Sbjct: 652 SAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTR 711

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   + ++M  +GI PD   ++ L  G+ +    + A      M+     PN+  F T++
Sbjct: 712 KATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLL 771

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G  S G +  A  V  +M + G+ PN  T++ L  G+ +      A  +   M   G  
Sbjct: 772 GGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFV 831

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
           P+ ST+  L       G+  +AK +   ++ K   +      DI V    R+
Sbjct: 832 PKVSTYNALISDFTKAGMMTQAKELFKDMQ-KRGVHPTSCTYDILVSGWSRI 882



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 193/413 (46%), Gaps = 13/413 (3%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           +P+ V Y  LLAAL+         ++++++ + G+  D +  N ++     +G ++ A  
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 164 TFWKMKESGLTPTTSTYNTL----IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
                +  G+TP  S+  TL    I G+G       ++ + D M+ +G +  ++  YN L
Sbjct: 157 L--ADRAGGITPWMSSAGTLSLLDIAGFG---DTPAALSVADRMTAQG-LPMDVVGYNTL 210

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           V  +C    +  A  V+  M  +G+ P+V TY      Y +    ++A ++   M  NGV
Sbjct: 211 VAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGV 270

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
             +  T   +++G C++G+  EA    R M + G  PN V +  LI    +      +  
Sbjct: 271 LLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLS 330

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +L  M    V  D++TY+ +M+     G  D+ K+         + P+   Y++L     
Sbjct: 331 LLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALC 390

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +    ++AE++L+ M E    PNVV F+++I+G+   G +D+A E    M E G++PN+ 
Sbjct: 391 KAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVV 450

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           T+ TL+ G+ + +    A E+   M   GV   K     L    R  G  +EA
Sbjct: 451 TYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEA 503



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 141/317 (44%), Gaps = 12/317 (3%)

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +P    YN+L+ A  +  +   A  V+ +M   G+  D VT NT+     +NG+ D A  
Sbjct: 100 RPTTVAYNILLAALSDHAH---APAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAAA 156

Query: 270 VIVEMEHNGVQPNGRTCGII----ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +       G+ P   + G +    I+G+   G    AL  A  M   G+  ++V +N L+
Sbjct: 157 L--ADRAGGITPWMSSAGTLSLLDIAGF---GDTPAALSVADRMTAQGLPMDVVGYNTLV 211

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF      D    VL +MKE  V+P+V TY+  +  +     +++  ++++ M + G+ 
Sbjct: 212 AGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL 271

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
            D    S L  G  R+    +A  L   M + G  PN V + T+I      G     + +
Sbjct: 272 LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
             +M   GV  +L T+  LM    +  +    ++ L+   +  + P   T+ +L +A   
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 506 TGLTKEAKRILSKIKNK 522
                EA+++L +++ K
Sbjct: 392 AHNVDEAEQVLLEMEEK 408



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 1/152 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   L+  L   G+  EA  +   + + G +P+ +TY  L      Q        +  
Sbjct: 764 IATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYC 823

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  P    +NA+I+ F+++G M +A + F  M++ G+ PT+ TY+ L+ G+    
Sbjct: 824 EMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIR 883

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              E  K L  M  +G   P+  T + + RA+
Sbjct: 884 NGTEVKKCLKDMKEKG-FSPSKGTLSFICRAF 914


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  195 bits (495), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 231/490 (47%), Gaps = 43/490 (8%)

Query: 69   CRTVRSMTKLMNSL-IERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
            C ++ S+  L+  + ++ G    A   F  +   G KPS+ T   +LA++   KR   + 
Sbjct: 910  CNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVW 969

Query: 128  SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            S+  ++ + G+ P+   FN +IN     GN+++A +   +M+E+G  PT  TYNTL+  Y
Sbjct: 970  SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 1029

Query: 188  GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
               G+ + +++L+D M  +G ++ ++ TYNV +   C      +A+ ++ KM    + P+
Sbjct: 1030 CKKGRYKAAIELIDYMICKG-IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 1088

Query: 248  VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
             VTYNT+   + + G+   A +V  EM    + PN  T   +I G+C  G  +EALR   
Sbjct: 1089 EVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLD 1148

Query: 308  TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV---ITYSTIMNAWS 364
             M+  G+  N V +  L+ G  +    +  +    L++  RVN  V   I Y+ +++   
Sbjct: 1149 HMEAAGLRLNEVTYGTLLNGLCK---HEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLC 1205

Query: 365  TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
              G +D+  ++  +M K G+ PD   YS L  G+ R    + A+E++  M  SG   N +
Sbjct: 1206 KNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKI 1265

Query: 425  IFTTIISGWCSDGSMDRAIEVFDKM------CEH-------------------------- 452
            I++T+I  +C  G++  A++V+  M       +H                          
Sbjct: 1266 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 1325

Query: 453  ---GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
               G+ PN  T++ ++ GY     P  A      M   G HP   T+  L +     G  
Sbjct: 1326 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 1385

Query: 510  KEAKRILSKI 519
             EAK+ L+++
Sbjct: 1386 VEAKKFLNRL 1395



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 201/418 (48%), Gaps = 1/418 (0%)

Query: 65   NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
            +K  C  V +   L+N L   G  ++A  +   + E G  P++VTY TLL     + R+ 
Sbjct: 977  DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 1036

Query: 125  SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
            +   ++  +   G++ D   +N  I+    +    +A     KM++  ++P   TYNTLI
Sbjct: 1037 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 1096

Query: 185  KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
             G+   GK   + ++ + MS+  ++ PN  TYN L+   C+  +  EA  ++  M A+G+
Sbjct: 1097 NGFVKEGKIGVAAQVFNEMSK-FDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 1155

Query: 245  KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            + + VTY T+     ++ + + A+ ++  M  N +        ++I G CK G + EA++
Sbjct: 1156 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 1215

Query: 305  FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
                M + GV+P+++ ++ LI GF  + +     E++  M    +  + I YST++  + 
Sbjct: 1216 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFC 1275

Query: 365  TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
              G + +  +++  M   G   D    ++L     R+ +  +AE+ L  M   G  PN +
Sbjct: 1276 QHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSI 1335

Query: 425  IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
             +  II+G+ S G    A   FD M + G  P+  T+ +L+ G  +      A++ L 
Sbjct: 1336 TYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLN 1393



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 201/446 (45%), Gaps = 8/446 (1%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L+N L +  K + A+ +   +         + YT L+  L      +    ++  + ++G
Sbjct: 1165 LLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDG 1224

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            ++PD I ++++IN F   GN++ A +   +M  SGL      Y+TLI  +   G   E++
Sbjct: 1225 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 1284

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            K+  +M+  G+   +  T NVLV + C +  + EA   +  M+  G+ P+ +TY+ I   
Sbjct: 1285 KVYAVMNCNGHGADHF-TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIING 1343

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            Y   G+   A     +M   G  P+  T G ++ G CK G + EA +F   +       +
Sbjct: 1344 YGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVD 1403

Query: 318  LVIFNLLIKGFVEIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
             V++N L+    E      + E +AL   M +  V PD  TYS+++      G       
Sbjct: 1404 SVMYNTLL---AETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVC 1460

Query: 375  IFDD-MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F   MG+  + P+   Y+ L  G  +   P+ A      M++ G  P+ V F  II   
Sbjct: 1461 LFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSC 1520

Query: 434  CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
               G M +A + F  M   GV PNL T+  L+ G+S+ +   R   +   M   G+ P K
Sbjct: 1521 SRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDK 1580

Query: 494  STFLLLAEARRATGLTKEAKRILSKI 519
             TF  L      +G+     ++L K+
Sbjct: 1581 LTFHSLILGLSKSGIPDLGVKLLGKM 1606



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 225/529 (42%), Gaps = 32/529 (6%)

Query: 86   GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-------IQKRFNSIHSIMSQVEENGM 138
            G P  A + F+++I+ G  PS  TY +LL  L         +K  N +H I   V     
Sbjct: 1348 GDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAV----- 1402

Query: 139  DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
              DS+ +N ++    +SGN+ EA+  F KM ++ + P + TY++L+ G    GK   +V 
Sbjct: 1403 --DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVC 1460

Query: 199  LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
            L       G + PN   Y  LV       +   A+    +M   G  PD V +N I  + 
Sbjct: 1461 LFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSC 1520

Query: 259  AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
            ++ G+  +A +    M   GV PN  T  I++ G+ K+  +   L    TM   G+ P+ 
Sbjct: 1521 SRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDK 1580

Query: 319  VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
            + F+ LI G  +    D   ++L  M       D  T++ ++N +S +G M K  ++ + 
Sbjct: 1581 LTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNF 1640

Query: 379  MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
            M   G+ PD   Y+ +  G  ++    ++  +L  M+E+G  P    + T+I+G C  G 
Sbjct: 1641 MNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGD 1700

Query: 439  MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
            +  A ++ D+M   G   +      ++ G     +   A  +L  M    + P  +TF  
Sbjct: 1701 IQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTT 1760

Query: 499  L----------AEARRATGLTKEAKRILSKIKNKERTNEMEAEED--IPVESLERLYHKE 546
            L          AEA +  G+ +     L  +        M A  D     E  E + H++
Sbjct: 1761 LMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRD 1820

Query: 547  ATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATT 595
                  PN+     +V  D   +A  L +G  LL D       SW  +T
Sbjct: 1821 LC----PNITTYAVLV--DAISAANNLIQGEKLLTDLQERGLISWGGST 1863



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/415 (23%), Positives = 180/415 (43%), Gaps = 37/415 (8%)

Query: 76   TKLMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
            + L+  L  +GK   A  +F   +  G   P+ V YT L+  L+      +      ++ 
Sbjct: 1443 SSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMM 1502

Query: 135  ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY------- 187
            + G  PD++ FNA+I++ S  G M +A D F  M+  G+ P  +TYN L+ G+       
Sbjct: 1503 KKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALL 1562

Query: 188  ------------GI----------------AGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
                        GI                +G P+  VKLL  M  EG +     T+N+L
Sbjct: 1563 RYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQF-TFNIL 1621

Query: 220  VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
            +  +     + +A+++++ M   G+ PD  TYN I     +     ++  V+ EM  NGV
Sbjct: 1622 INKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGV 1681

Query: 280  QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
             P       +I+G C+ G I+ A +    M+  G   + V  + +++G +     +    
Sbjct: 1682 IPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAML 1741

Query: 340  VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
            VL  M   R+ P + T++T+M+ +     + +  ++   M   G+K D  AY++L  G  
Sbjct: 1742 VLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMC 1801

Query: 400  REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
               +   A EL   M      PN+  +  ++    +  ++ +  ++   + E G+
Sbjct: 1802 ANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1856



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 6/280 (2%)

Query: 250  TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
             ++ +   Y + G  D A E    +   G +P+  TC +I++   K+ + +      R M
Sbjct: 916  VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 975

Query: 310  KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
             + G+ PN+  FN+LI G     +      +L  M+E    P ++TY+T++N +   G  
Sbjct: 976  SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 1035

Query: 370  DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
                E+ D M   GI+ D   Y++            KA  LL  M +    PN V + T+
Sbjct: 1036 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 1095

Query: 430  ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            I+G+  +G +  A +VF++M +  +SPN  T+  L+ G+        A  +L  M+A G+
Sbjct: 1096 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 1155

Query: 490  HPQKSTFLLLAEARRATGLTKEAKRILSK-IKNKERTNEM 528
               + T+          GL K  K  L+K +  + R N+M
Sbjct: 1156 RLNEVTY-----GTLLNGLCKHEKFELAKRLLERMRVNDM 1190



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/356 (23%), Positives = 157/356 (44%), Gaps = 36/356 (10%)

Query: 64   MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
            M K +C    +   +++S   RG+  +A   F+ +   G  P+L TY  LL   + ++  
Sbjct: 1502 MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQAL 1561

Query: 124  NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                S+ S +   G+ PD + F+++I   S+SG  +  +    KM   G      T+N L
Sbjct: 1562 LRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNIL 1621

Query: 184  IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
            I  Y  +GK  ++  L++ M+  G V P+  TYN +      +    E+  V+H+M  +G
Sbjct: 1622 INKYSESGKMRKAFDLVNFMNTLG-VFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENG 1680

Query: 244  MKPDVVTYNTIATAYAQNGEADQAEEVIVEME-------------------HNG------ 278
            + P    Y T+     + G+   A ++  EME                   H G      
Sbjct: 1681 VIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAM 1740

Query: 279  ----------VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
                      + P   T   ++  +C++ KI EAL+    M+  G+  ++V +N+LI G 
Sbjct: 1741 LVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGM 1800

Query: 329  VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
                D     E+   M+   + P++ TY+ +++A S A  + + +++  D+ + G+
Sbjct: 1801 CANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1856


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 191/382 (50%), Gaps = 1/382 (0%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P++  +N VI     +G   +A++ F +M E  + P   TYNT+I G+   G  E   +L
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
            D M   G +KPN  TYNVL+   C    + E   ++ +MA+  M PD  TY+ +    +
Sbjct: 73  RDQMVCHG-LKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLS 131

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +NG++     +  +   NGV     TC I+++G CK+GK+  A    +++   G+ P  V
Sbjct: 132 RNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRV 191

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           I+N LI G+ +  + +G       MK   + PD ITY+ ++N    A  +   +++  +M
Sbjct: 192 IYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEM 251

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G+ P    ++ L   Y R  + EK   +L  M E+G  PNVV + +I++ +C +G +
Sbjct: 252 QDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKI 311

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             A+ + D M    V PN + +  ++  Y E     +A  +++ MK+ G+ P   T+ LL
Sbjct: 312 PEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLL 371

Query: 500 AEARRATGLTKEAKRILSKIKN 521
            +         EA+ I++ + N
Sbjct: 372 IKGLCNQSQISEAEEIINSLSN 393



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 195/403 (48%), Gaps = 1/403 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L   G+  E  A+ + +      P   TY+ L   L+      ++ S+  +  +NG
Sbjct: 91  LLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNG 150

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +       + ++N   + G +  A +    +  +GL PT   YNTLI GY   G+ E + 
Sbjct: 151 VTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAF 210

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M +  ++KP+  TYN L+   C  + IT A +++ +M  +G+ P V T+NT+  A
Sbjct: 211 STFGQM-KSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDA 269

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G+ ++   V+ EM+ NG++PN  + G I++ +CK GKI EA+     M    V PN
Sbjct: 270 YGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPN 329

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             ++N +I  +VE    D    ++  MK   ++P ++TY+ ++        + + +EI +
Sbjct: 330 AQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIIN 389

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +    + PDA +Y+ L          +KA +L   M + G    V  +  +ISG    G
Sbjct: 390 SLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAG 449

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
            ++    ++ KM ++ V P+      ++  YS+     +AE++
Sbjct: 450 RLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDL 492



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 219/455 (48%), Gaps = 11/455 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++  I+ G  +    + + ++  G KP+ +TY  LL+ L    R     +++ ++    
Sbjct: 56  MIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQK 115

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M PD   ++ + +  S +G+ +  +  F K  ++G+T    T + L+ G    GK   + 
Sbjct: 116 MVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAE 175

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L  +   G V P    YN L+  +C    +  A++   +M +  +KPD +TYN +   
Sbjct: 176 EVLQSLVNAGLV-PTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALING 234

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +      A+++++EM+ NGV P   T   +I  Y + G++++       M+E G+ PN
Sbjct: 235 LCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPN 294

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKE 374
           +V +  ++  F +      + E +A++ +     V P+   Y+ I++A+   G  D+   
Sbjct: 295 VVSYGSIVNAFCK---NGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFI 351

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + + M   GI P    Y++L KG   + +  +AEE++ ++      P+ V + T+IS  C
Sbjct: 352 LVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACC 411

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G++D+A+++  +M ++G+   ++T+  L+ G   A +    E + Q M    V P  +
Sbjct: 412 YRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNA 471

Query: 495 TFLLLAEARRATGLTKEA----KRILSKIKNKERT 525
              ++ EA    G   +A    K +L K  N + T
Sbjct: 472 IHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHDDT 506



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 146/322 (45%), Gaps = 35/322 (10%)

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           +L  M R+G   PN  +YNV++          +A  V  +M    + P+ +TYNT+   +
Sbjct: 1   MLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGH 60

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
            + G+ +    +  +M  +G++PN  T  +++SG C+ G++ E                 
Sbjct: 61  IKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGET---------------- 104

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
                                +L  M   ++ PD  TYS + +  S  G       +F  
Sbjct: 105 -------------------SALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGK 145

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
             K G+    +  SIL  G  ++ +   AEE+L +++ +G  P  VI+ T+I+G+C  G 
Sbjct: 146 YLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGE 205

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           ++ A   F +M    + P+  T+  L+ G  +A +   A+++L  M+  GV+P   TF  
Sbjct: 206 LEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNT 265

Query: 499 LAEARRATGLTKEAKRILSKIK 520
           L +A   TG  ++   +LS+++
Sbjct: 266 LIDAYGRTGQLEKCFIVLSEMQ 287



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 59/227 (25%), Positives = 118/227 (51%), Gaps = 1/227 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+++    G+ ++   + + + E G KP++V+Y +++ A     +     +I+
Sbjct: 259 TVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAIL 318

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +    + P++  +NA+I+A+ E G  ++A     KMK +G++P+  TYN LIKG    
Sbjct: 319 DDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQ 378

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +  E+ ++++ +S    + P+  +YN L+ A C   NI +A ++  +M   G+K  V T
Sbjct: 379 SQISEAEEIINSLSNH-RLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRT 437

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           Y+ + +     G  ++ E +  +M  N V P+     I++  Y K G
Sbjct: 438 YHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYG 484


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 220/465 (47%), Gaps = 40/465 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L + G+  +A   F   I+ G +P++VTY+T++  L      +    ++ ++   G
Sbjct: 7   LINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRG 66

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+++ +N ++NA    G  +EA     +M  +G  P   T+  +IKG    G+ E + 
Sbjct: 67  CAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAF 126

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +++D M   G V P++  + VL+ A C    + EAW    ++   G  PD VTYNT+   
Sbjct: 127 RVVDEMVDRGFV-PDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDG 185

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G  + A  V+  +  +   P   T  I + G  K G +  A  F  +M + GV PN
Sbjct: 186 LYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPN 245

Query: 318 LVIFNLLIKGFVE----------IMDRDG-------------------VDEVLALMKEFR 348
            V ++ LI G  +          + D++                    ++E + L+K   
Sbjct: 246 TVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMP 305

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE-PEKA 407
             P+V+ ++++MN    A  +D+  E+FD M ++G   D   Y+IL KG  + +  PE  
Sbjct: 306 CVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAY 365

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE-HGVSPNLKTFETLMW 466
             + +     G  PNVV F+T+I G C+ G +++A EV+++M    G+SPN  T+  L+ 
Sbjct: 366 RHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLE 425

Query: 467 GYSEARQPWRAEEILQIM--------KAFGVHPQKSTFLLLAEAR 503
           G  +A    R E+  + M         ++ +H  +  FL++   R
Sbjct: 426 GLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCR 470



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 201/420 (47%), Gaps = 25/420 (5%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L++ L +  + +EA  +   +      P++V + +L+  L   +R +    +   +
Sbjct: 280 AFSSLLHGLCQAHRLEEAIQLLKAM---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVM 336

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES-GLTPTTSTYNTLIKGYGIAGK 192
           +E+G   D I +N ++    +   + EA      M+ + G +P   T++TLI+G   AG+
Sbjct: 337 KESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGR 396

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN-----------EKNITEAWNV-----M 236
             ++ ++ + M     + PN  TY  L+   C            E+ +   W       +
Sbjct: 397 VNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPI 456

Query: 237 HK-----MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           H      +     +P +VTYNT+ T  +++G    A  ++  M  +G+ P+  T   ++ 
Sbjct: 457 HSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLD 516

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
           G CKE +I +A    +   E G  PN+V ++ LI G  ++   D   ++LA M E     
Sbjct: 517 GLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRA 576

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           + +TYST+++     G M+    +   M  AG  PDA  Y+ L  G+ + Q   +A  LL
Sbjct: 577 NTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLL 636

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M+E+GFHP+VV +TT+  G C  G  D A+E+ D M   G +PN  T+ +++ G  +A
Sbjct: 637 REMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKA 696



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 212/430 (49%), Gaps = 39/430 (9%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L++   +R + +EA  +   ++E G  PS+VTYTTL   L    RF+    I+  +   G
Sbjct: 619  LIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARG 678

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLIKGYGIAGKPEES 196
              P++I ++++++   ++G + EA+  F KM ++  + P    Y+ LI G   AG+ +E+
Sbjct: 679  CAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEA 738

Query: 197  VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
             + L+ M R G + P++ T+++L+   C+   I     +   MA  G K D+  YN +  
Sbjct: 739  YEFLERMIRAGRI-PDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMIN 797

Query: 257  AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG--- 313
            AY   GE   A  ++ EM+ +G+  N  T GI+I   C   +I EA+ +  ++ E     
Sbjct: 798  AYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPEDCRDE 857

Query: 314  VHPNLVIFNL-----------LIKGFVE------------IMD---RDGVDEVLA-LMKE 346
            +  N +I +L           L++  V             +MD   + G  EV A L++E
Sbjct: 858  ISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQE 917

Query: 347  FRV---NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
             R    +PD+ TY+ +++  S A  +    + F++M +  +KPDA  YS L   + +  +
Sbjct: 918  MRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADK 977

Query: 404  PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
             + A +LL +   SG  P + +++T++   C +   D+A+EV  +M      P +  + +
Sbjct: 978  VDDAWKLLRS---SGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTS 1034

Query: 464  LMWGY-SEAR 472
            L   Y +E R
Sbjct: 1035 LATAYVAEGR 1044



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 212/469 (45%), Gaps = 30/469 (6%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L+++L E G+  EA   F  ++  G  P  VTY T++  L    R  +   ++  + E
Sbjct: 145 TVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAE 204

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +   P    F   ++  S++GN+  A + F  M ++G++P T TY+ LI G   AGK + 
Sbjct: 205 SFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDI 264

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++ LL    R+ N +  +  ++ L+   C    + EA  ++  M      P+VV +N++ 
Sbjct: 265 ALGLL----RDKNSQAGMFAFSSLLHGLCQAHRLEEAIQLLKAMPCV---PNVVCFNSLM 317

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY-GV 314
               Q    D+A E+   M+ +G   +  T  I++ G CK  +I EA R    M+   G 
Sbjct: 318 NGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGC 377

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR-VNPDVITYSTIMNAWSTAGFMDKCK 373
            PN+V F+ LI+G       +   EV   M     ++P+  TY+ ++     AG   + +
Sbjct: 378 SPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLE 437

Query: 374 EIFDDMGK---------------------AGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
           + F+ M +                        +P    Y+ L  G  +      A  LL 
Sbjct: 438 QCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLE 497

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            MIESG  P+V+ F +++ G C +  +  A  VF +  E G  PN+ T+ TL+ G S+  
Sbjct: 498 FMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMA 557

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           +   A ++L  M   G      T+  + +     G  ++A  +L ++++
Sbjct: 558 KMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRD 606



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/461 (22%), Positives = 215/461 (46%), Gaps = 8/461 (1%)

Query: 64   MNKESCRT-VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
            M +  CR    + + +++ L++ G+ ++A  +   + + G  P  VTY TL+     ++R
Sbjct: 569  MVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQR 628

Query: 123  FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                  ++ ++ E G  P  + +  + +    SG  +EA++    M   G  P   TY++
Sbjct: 629  LREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSS 688

Query: 183  LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
            ++ G   AG+  E++   + M+R+  V P++  Y+ L+   C    I EA+  + +M  +
Sbjct: 689  IVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRA 748

Query: 243  GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            G  PDVVT++ +       G  D   E+   M   G + +      +I+ YC +G+   A
Sbjct: 749  GRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAA 808

Query: 303  LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN-PDVITYSTIMN 361
                  MK +G+  N V   ++IK    +   D +DE ++       +  D I+Y+T++ 
Sbjct: 809  YALLEEMKTHGIAKNTVTHGIVIKA---LCGNDRIDEAVSYFHSIPEDCRDEISYNTLIT 865

Query: 362  AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +   +   ++  E+   M   G  PDA  Y  +  G  +   PE A +LL  M   G  P
Sbjct: 866  SLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSP 925

Query: 422  NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            ++  +T +ISG      +  A + F++M    + P+   + +L+  + +A    + ++  
Sbjct: 926  DLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKAD---KVDDAW 982

Query: 482  QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            +++++ G+ P  + +  + ++      T +A  ++ ++K+K
Sbjct: 983  KLLRSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSK 1023



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 187/407 (45%), Gaps = 31/407 (7%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           + +N +IN   ++G + +A   F K  + G  PT  TY+T+I G     + ++  KLL+ 
Sbjct: 2   VTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEE 61

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           M+  G   PN  TYN LV A   +    EA++++ +MAA+G  P+++T+  I     + G
Sbjct: 62  MAGRG-CAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
           E + A  V+ EM   G  P+     +++   C+ G++ EA  F + +   G  P+ V +N
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            ++ G  +    +    VL L+ E   +P V T++  ++  S AG +    E FD M + 
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELL--------MTMIESGFH-------------- 420
           G+ P+   Y  L  G  +  + + A  LL        M    S  H              
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHRLEEAIQL 300

Query: 421 -------PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
                  PNVV F ++++G C    +D A E+FD M E G S ++ T+  L+ G  + R+
Sbjct: 301 LKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRR 360

Query: 474 PWRAEEILQIMKAF-GVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
              A   +++M+   G  P   TF  L +     G   +A  +  ++
Sbjct: 361 IPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERM 407



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 223/471 (47%), Gaps = 34/471 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSI 129
           TV + T  ++ L + G    A   F+++ + G  P+ VTY  L+  L    + + ++  +
Sbjct: 210 TVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLL 269

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             +  + GM      F+++++   ++  +EEA+     M      P    +N+L+ G   
Sbjct: 270 RDKNSQAGM----FAFSSLLHGLCQAHRLEEAIQLLKAMP---CVPNVVCFNSLMNGLCQ 322

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDV 248
           A + +E+ +L D+M +E     ++ TYN+L++  C  + I EA+  +  M  + G  P+V
Sbjct: 323 ARRVDEAFELFDVM-KESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNV 381

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEM-EHNGVQPNGRTCGIIISGYCKEG---KIKEAL- 303
           VT++T+       G  +QA EV   M    G+ PN  T   ++ G CK G   ++++   
Sbjct: 382 VTFSTLIQGLCNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFE 441

Query: 304 ----RFARTMKEYGVH-------------PNLVIFNLLIKGFVEI-MDRDGVDEVLALMK 345
               R  R+   + +H             P LV +N L+ G  +  M RD +  +L  M 
Sbjct: 442 QMLEREWRSSSSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALG-LLEFMI 500

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           E  ++PDVIT++++++       +     +F    + G +P+   YS L  G  +  + +
Sbjct: 501 ESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMD 560

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +A +LL  M+E G   N V ++T++ G    G M+ A+ V  +M + G  P+  T+ TL+
Sbjct: 561 EALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLI 620

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
            G+ + ++   A  +L+ M   G HP   T+  L      +G   EA  IL
Sbjct: 621 DGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEIL 671



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/343 (24%), Positives = 156/343 (45%), Gaps = 12/343 (3%)

Query: 72   VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
            V + + L++ L + G+  EA      +I  G  P +VT++ L+  L    R ++   +  
Sbjct: 719  VIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFC 778

Query: 132  QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
             + E G   D   +NA+INA+   G    A     +MK  G+   T T+  +IK      
Sbjct: 779  GMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHGIAKNTVTHGIVIKALCGND 838

Query: 192  KPEESVKLLDLMSREGNVKPNLR---TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            + +E+V          ++  + R   +YN L+ +    +   +A  ++  M A G  PD 
Sbjct: 839  RIDEAVSYFH------SIPEDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDA 892

Query: 249  VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
              Y T+     + G  + A +++ EM   G  P+ RT  I+ISG  K  ++  A  +   
Sbjct: 893  CNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEE 952

Query: 309  MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
            M    + P+ ++++ LI  F +    D VD+   L++   + P +  YST++++      
Sbjct: 953  MLRKNLKPDAIVYSSLIDAFCK---ADKVDDAWKLLRSSGIEPTITMYSTMVDSLCKNRG 1009

Query: 369  MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
             DK  E+  +M     +P  H ++ LA  YV E   ++A +L+
Sbjct: 1010 TDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLV 1052



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 115/233 (49%), Gaps = 6/233 (2%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            ++ +L    +  EA + F+++ E       ++Y TL+ +L   +R      ++  +  +G
Sbjct: 830  VIKALCGNDRIDEAVSYFHSIPEDCRDE--ISYNTLITSLVASRRSEQALELLRAMVADG 887

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              PD+  +  V++   ++G+ E A     +M+  G +P   TY  +I G   A +   + 
Sbjct: 888  GSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLAC 947

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
               + M R+ N+KP+   Y+ L+ A+C    + +AW ++    +SG++P +  Y+T+  +
Sbjct: 948  DYFEEMLRK-NLKPDAIVYSSLIDAFCKADKVDDAWKLLR---SSGIEPTITMYSTMVDS 1003

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
              +N   D+A EVI EM+    +P       + + Y  EG++ EA++    ++
Sbjct: 1004 LCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 98/209 (46%), Gaps = 4/209 (1%)

Query: 67   ESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
            E CR   S   L+ SL+   + ++A  +   ++  G  P    Y T++  L         
Sbjct: 852  EDCRDEISYNTLITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVA 911

Query: 127  HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
              ++ ++   G  PD   +  +I+  S++  +  A D F +M    L P    Y++LI  
Sbjct: 912  AKLLQEMRSRGHSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDA 971

Query: 187  YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
            +  A K +++ KLL    R   ++P +  Y+ +V + C  +   +A  V+ +M +   +P
Sbjct: 972  FCKADKVDDAWKLL----RSSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEP 1027

Query: 247  DVVTYNTIATAYAQNGEADQAEEVIVEME 275
             +  + ++ATAY   G  D+A +++ +++
Sbjct: 1028 GIHIWTSLATAYVAEGRVDEAVKLVNDLQ 1056



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/142 (26%), Positives = 70/142 (49%), Gaps = 6/142 (4%)

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y++L  G  +      A       I+ GF P VV ++T+I G C D  +D+  ++ ++M 
Sbjct: 4   YNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMA 63

Query: 451 EHGVSPNLKTFETL---MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
             G +PN  T+ TL   + G   A++ +    +L+ M A G  P+  TF L+ +     G
Sbjct: 64  GRGCAPNAVTYNTLVNALLGQGRAKEAF---SLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 508 LTKEAKRILSKIKNKERTNEME 529
             + A R++ ++ ++    ++E
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVE 142



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 67/160 (41%)

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
           ++TY+ ++N    AG +      F    + G +P    YS +  G  R+ E +K  +LL 
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M   G  PN V + T+++     G    A  + ++M  +G  P L TF  ++ G  +  
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           +   A  ++  M   G  P      +L  A    G   EA
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEA 160


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 118/444 (26%), Positives = 224/444 (50%), Gaps = 4/444 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++ L    K  EA A+ + +++ G +P LVTY T++  L  +   +   ++++++
Sbjct: 190 TFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM 249

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E   +  + + FN +I++  +  ++E A+D F +M+  G+ P   TYN+LI      G+ 
Sbjct: 250 EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRW 309

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ +LL  M  E  + PN+ T+N L+ A+  E  + EA  +  +M    + PD +TYN 
Sbjct: 310 SDASRLLSNM-LEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNL 368

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +  +   D+A+++   M      PN +T   +I+G+CK  ++++ +   R M + G
Sbjct: 369 LINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRG 428

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           +  N V +  +I+GF +  D D    V   M   RV  D++TYS +++   + G +D   
Sbjct: 429 LVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTAL 488

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            IF  + K+ ++ +   Y+ + +G  +  +  +A +L  ++      P+VV + T+ISG 
Sbjct: 489 VIFKYLQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGL 545

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           CS   +  A ++F KM E G  PN  T+ TL+           + E+++ M++ G     
Sbjct: 546 CSKRLLQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDA 605

Query: 494 STFLLLAEARRATGLTKEAKRILS 517
           ST  L+        L K    +LS
Sbjct: 606 STISLVTNMLHDGRLDKSFLNMLS 629



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 214/432 (49%), Gaps = 6/432 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +++ L+N      +  +A A+ + ++E G+KP   T+TTL+  L +  + +   +++ 
Sbjct: 153 IVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVD 212

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G  PD + +  V+N   + G+++ A++   KM+ + +      +NT+I       
Sbjct: 213 QMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYR 272

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E +V L   M  +G ++PN+ TYN L+   CN    ++A  ++  M    + P+VVT+
Sbjct: 273 HVEVAVDLFTEMETKG-IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTF 331

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  A+ + G+  +AE++  EM    + P+  T  ++I+G+C   ++ EA +  + M  
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVS 391

Query: 312 YGVHPNLVIFNLLIKGFVEIMD-RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
               PN+  +N LI GF +     DGV E+   M +  +  + +TY+TI+  +  AG  D
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGV-ELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             + +F  M    +  D   YSIL  G     + + A  +   + +S    N+ I+ T+I
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C  G +  A ++F   C   + P++ T+ T++ G    R    A+++ + MK  G  
Sbjct: 511 EGMCKAGKVGEAWDLF---CSLSIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567

Query: 491 PQKSTFLLLAEA 502
           P   T+  L  A
Sbjct: 568 PNSGTYNTLIRA 579



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 201/397 (50%), Gaps = 1/397 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++    KL++++ +  K +   ++   +   G    L TY+  +     + + +   +++
Sbjct: 82  SIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVL 141

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++ + G +PD +  ++++N +  S  + +A+    +M E G  P T T+ TLI G  + 
Sbjct: 142 AKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLH 201

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K  E+V L+D M + G  +P+L TY  +V   C   +I  A N+++KM A+ +K +VV 
Sbjct: 202 NKASEAVALVDQMVQRG-CQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVI 260

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +NTI  +  +    + A ++  EME  G++PN  T   +I+  C  G+  +A R    M 
Sbjct: 261 FNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNML 320

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E  ++PN+V FN LI  F +       +++   M +  ++PD ITY+ ++N +     +D
Sbjct: 321 EKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLD 380

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + K++F  M      P+   Y+ L  G+ + +  E   EL   M + G   N V +TTII
Sbjct: 381 EAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTII 440

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            G+   G  D A  VF +M  + V  ++ T+  L+ G
Sbjct: 441 QGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHG 477



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 218/446 (48%), Gaps = 1/446 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L N L +  K  +A  +F ++++    PS+V +  LL+A+    +F  + S+  Q++  G
Sbjct: 54  LRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLG 113

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   ++  IN F     +  A+    KM + G  P   T ++L+ GY  + +  ++V
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L+D M   G  KP+  T+  L+         +EA  ++ +M   G +PD+VTY T+   
Sbjct: 174 ALVDQMVEMG-YKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNG 232

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+ D A  ++ +ME   ++ N      II   CK   ++ A+     M+  G+ PN
Sbjct: 233 LCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPN 292

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N LI              +L+ M E ++NP+V+T++ +++A+   G + + +++ +
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M +  I PD   Y++L  G+      ++A+++   M+     PN+  + T+I+G+C   
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++  +E+F +M + G+  N  T+ T++ G+ +A     A+ + + M +  V     T+ 
Sbjct: 413 RVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYS 472

Query: 498 LLAEARRATGLTKEAKRILSKIKNKE 523
           +L     + G    A  I   ++  E
Sbjct: 473 ILLHGLCSYGKLDTALVIFKYLQKSE 498



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 93/373 (24%), Positives = 170/373 (45%), Gaps = 42/373 (11%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N L   G+  +A  + +N++E    P++VT+  L+ A   + +      +  
Sbjct: 293 VVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHE 352

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +  +DPD+I +N +IN F     ++EA   F  M      P   TYNTLI G+    
Sbjct: 353 EMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCK 412

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E+ V+L   MS+ G V                                     + VTY
Sbjct: 413 RVEDGVELFREMSQRGLV------------------------------------GNTVTY 436

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            TI   + Q G+ D A+ V  +M  N V  +  T  I++ G C  GK+  AL   + +++
Sbjct: 437 TTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQK 496

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             +  N+ I+N +I+G    M + G V E   L     + PDV+TY+T+++   +   + 
Sbjct: 497 SEMELNIFIYNTMIEG----MCKAGKVGEAWDLFCSLSIKPDVVTYNTMISGLCSKRLLQ 552

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  ++F  M + G  P++  Y+ L +  +R+ +   + EL+  M  SGF  +     +++
Sbjct: 553 EADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-SLV 611

Query: 431 SGWCSDGSMDRAI 443
           +    DG +D++ 
Sbjct: 612 TNMLHDGRLDKSF 624



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 113/228 (49%), Gaps = 4/228 (1%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F ++K+    +++   L+N   +  + ++   +F  + + G   + VTYTT++       
Sbjct: 388 FMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAG 447

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
             +S   +  Q+  N +  D + ++ +++     G ++ A+  F  +++S +      YN
Sbjct: 448 DCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYN 507

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           T+I+G   AGK  E+  L   +S    +KP++ TYN ++   C+++ + EA ++  KM  
Sbjct: 508 TMIEGMCKAGKVGEAWDLFCSLS----IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
            G  P+  TYNT+  A  ++ +   + E+I EM  +G   +  T  ++
Sbjct: 564 DGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLV 611


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/481 (25%), Positives = 225/481 (46%), Gaps = 16/481 (3%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S   +MN L+E G   +A  ++  + + G +  + TYT  + +     R  +   ++
Sbjct: 110 SVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAALRLL 169

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + E G D +++ +  V+    +SG  + A + F +M    L P    +N L+      
Sbjct: 170 RNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKK 229

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE---------KNITEAWNVMHKMAA 241
           G   ES +LL  + + G V PNL T+N+ V+  C E           + EA   + KM  
Sbjct: 230 GLVFESERLLGKVLKRG-VCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVN 288

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G +PD +TYN+I   Y + G    A  V+ +    G +P+  T   +I+G+CK+G    
Sbjct: 289 GGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDR 348

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYST 358
           A+   +     G+ P++V++N LIKG  +   +  +   L LM E   N   P++ TY+ 
Sbjct: 349 AMAVFKDGLGKGLRPSIVLYNTLIKGLSQ---QGLILPALQLMNEMAENGCLPNIWTYNL 405

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++N     G +     + DD    G  PD   Y+ L  GY ++ + + A E++  M   G
Sbjct: 406 VINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQG 465

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P+V+ + T+++G C  G  +  +E+F  M E G +PN+ T+  ++    +A++   A 
Sbjct: 466 MTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAV 525

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVES 538
           ++L  MK+ G+ P   +F  L       G    A ++  +++ +       A  +I V +
Sbjct: 526 DLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSA 585

Query: 539 L 539
            
Sbjct: 586 F 586



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 214/452 (47%), Gaps = 12/452 (2%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           L + G+   A+ +F+ ++     P +V +  L+  L  +        ++ +V + G+ P+
Sbjct: 191 LYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPN 250

Query: 142 SIFFNAVINAFSESGNME---------EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
              FN  +      G ++         EA +   KM   G  P   TYN++I GY   G 
Sbjct: 251 LFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGM 310

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +++ ++L     +G  KP+  TY  L+  +C + +   A  V       G++P +V YN
Sbjct: 311 VQDANRVLKDAVFKG-FKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYN 369

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+    +Q G    A +++ EM  NG  PN  T  ++I+G CK G + +A          
Sbjct: 370 TLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAK 429

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G  P++  +N LI G+ + +  D   E++  M    + PDVITY+T++N    AG  ++ 
Sbjct: 430 GCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEV 489

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            EIF  M + G  P+   Y+I+     + ++  +A +LL  M   G  P+VV F T+ +G
Sbjct: 490 MEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTG 549

Query: 433 WCSDGSMDRAIEVFDKM-CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           +C  G +D A ++F +M  ++ V     T+  ++  +SE      A ++  +MK  G  P
Sbjct: 550 FCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDP 609

Query: 492 QKSTFLLLAEARRATG-LTKEAKRILSKIKNK 522
              T+ ++ +     G +T+  K +L  ++ +
Sbjct: 610 DNYTYRVVIDGFCKMGNITQGYKFLLENMEKR 641



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/413 (24%), Positives = 188/413 (45%), Gaps = 35/413 (8%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           ++  +   +  EA+     ++ GG +P  +TY +++     +      + ++      G 
Sbjct: 267 LDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGF 326

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            PD   + ++IN F + G+ + AM  F      GL P+   YNTLIKG    G    +++
Sbjct: 327 KPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQ 386

Query: 199 LLDLMSREG----------------------------------NVKPNLRTYNVLVRAWC 224
           L++ M+  G                                     P++ TYN L+  +C
Sbjct: 387 LMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYC 446

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
            +  +  A  ++++M + GM PDV+TYNT+     + G++++  E+   ME  G  PN  
Sbjct: 447 KQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNII 506

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T  II+   CK  K+ EA+     MK  G+ P++V F  L  GF +I D DG  ++   M
Sbjct: 507 TYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566

Query: 345 -KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
            K++ V     TY+ I++A+S    M+   ++F  M  +G  PD + Y ++  G+ +   
Sbjct: 567 EKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGN 626

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
             +  + L+  +E  F P++  F  +++  C    +  A+ +   M + G+ P
Sbjct: 627 ITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVP 679



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/422 (24%), Positives = 194/422 (45%), Gaps = 16/422 (3%)

Query: 88  PQEAQAIFNNL-IEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           P +A  +FN+   E G K +  TY  ++  L     F  +  ++S++ EN    +++   
Sbjct: 20  PLKALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENV--NNALLEG 77

Query: 147 AVINA---FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
           A I A   +   G ++EA+DTF +M      P+  ++N ++      G   ++ K+   M
Sbjct: 78  AYIEAMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRM 137

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            R+  V+ ++ TY + ++++C       A  ++  M   G   + V Y T+      +GE
Sbjct: 138 -RDRGVQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGE 196

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D A E+  EM    + P+      ++   CK+G + E+ R    + + GV PNL  FN+
Sbjct: 197 HDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNI 256

Query: 324 LIKGFVE--IMDRD-------GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            ++G      +DR          +E L  M      PD +TY++I++ +   G +     
Sbjct: 257 FVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANR 316

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +  D    G KPD   Y  L  G+ ++ +P++A  +    +  G  P++V++ T+I G  
Sbjct: 317 VLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLS 376

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G +  A+++ ++M E+G  PN+ T+  ++ G  +      A  ++    A G  P   
Sbjct: 377 QQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIF 436

Query: 495 TF 496
           T+
Sbjct: 437 TY 438



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 164/370 (44%), Gaps = 10/370 (2%)

Query: 160 EAMDTFWKMK-ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
           +A++ F   K E G   T STY  +++  G  G+ EE  KLL  M    N       Y  
Sbjct: 22  KALEMFNSAKSEDGFKHTASTYKCIVQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIE 81

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
            ++ +  +  + EA +   +M      P V ++N I     + G  +QA +V + M   G
Sbjct: 82  AMKNYGRKGKVQEAVDTFERMDFYNCDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRG 141

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           VQ +  T  I I  +CK  +   ALR  R M E G   N V +  ++ G  +  + D   
Sbjct: 142 VQSDVYTYTIRIKSFCKTARPYAALRLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHAR 201

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           E+   M    + PDV+ ++ +++     G + + + +   + K G+ P+   ++I  +G 
Sbjct: 202 ELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGL 261

Query: 399 VREQEPEK---------AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            RE   ++         AEE L  M+  GF P+ + + +II G+C  G +  A  V    
Sbjct: 262 CREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDA 321

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G  P+  T+ +L+ G+ +   P RA  + +     G+ P    +  L +     GL 
Sbjct: 322 VFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLI 381

Query: 510 KEAKRILSKI 519
             A ++++++
Sbjct: 382 LPALQLMNEM 391



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/289 (27%), Positives = 143/289 (49%), Gaps = 10/289 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N L + G   +A  + ++ I  G  P + TY TL+     Q + +S   +++++   G
Sbjct: 406 VINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQG 465

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M PD I +N ++N   ++G  EE M+ F  M+E G TP   TYN ++     A K  E+V
Sbjct: 466 MTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAV 525

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYNTIAT 256
            LL  M  +G +KP++ ++  L   +C   +I  A+ +  +M     +     TYN I +
Sbjct: 526 DLLGEMKSKG-LKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTATYNIIVS 584

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A+++    + A ++   M+++G  P+  T  ++I G+CK G I +  +F     E    P
Sbjct: 585 AFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKRFIP 644

Query: 317 NLVIFNLLIKGFVEIMDRDGVDE---VLALMKEFRVNPDVITYSTIMNA 362
           +L  F  ++        +D V E   ++ LM +  + P+  T +TI  A
Sbjct: 645 SLTTFGRVLNCLCV---KDKVHEAVGIIHLMLQKGIVPE--TVNTIFEA 688


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 218/479 (45%), Gaps = 36/479 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+  L   G  ++A  +++ +++ G  P  V+Y TLL  L     F    ++ +
Sbjct: 429 VVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWN 488

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G    +  FN +IN F +   M EA +TF +MKE G  P   TY TLI GY   G
Sbjct: 489 DILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLG 548

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             EE+ K+ + M +E  + P++  YN L+      K   E  +++ +M   G+ P+VVTY
Sbjct: 549 NVEEAFKVKEKMEKEA-ILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTY 607

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   +   G  D+A     +M   G  PN   C  I+S   + G+I EA    + M  
Sbjct: 608 GTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVN 667

Query: 312 YGVH-----------------------------------PNLVIFNLLIKGFVEIMDRDG 336
             V                                    PN V++N+ I G  +    D 
Sbjct: 668 LDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDD 727

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             ++ + +     +PD  TY T+++ +S AG ++    + D+M K G+ P+   Y+ L  
Sbjct: 728 AKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALIN 787

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  +    ++A++L   +   G  PNV+ +  +I G+C +G+   A+++ +KM + G+SP
Sbjct: 788 GLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISP 847

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           +L T+  L++G+ +     +A  +L  M+        + F+ L E     G  K+  ++
Sbjct: 848 SLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKL 906



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 216/434 (49%), Gaps = 1/434 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C  ++RS  +L++SL+ +G+   A  +++++   G  P + T + ++ A      
Sbjct: 174 MGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGW 233

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            N     + +++  G + + + +N++I+     G+ME A      M E G+     T   
Sbjct: 234 VNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTL 293

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LIKGY    K EE+ K+L  M R   +  +   Y VL+  +C    + +A  +  +M   
Sbjct: 294 LIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNV 353

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G++ ++   N +   Y +NG+  +AE +++ M    ++P   +   ++ G+C+EG + +A
Sbjct: 354 GLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKA 413

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           +     M   G+  N+V  N L+KG   +   +    V  LM +  V PD ++Y T+++ 
Sbjct: 414 ISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDL 473

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G   +   +++D+   G     +A++ +  G+ + ++  +AEE    M E GF P+
Sbjct: 474 LFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPD 533

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            V + T+I G+C  G+++ A +V +KM +  + P+++ + +L+ G  ++++     ++L 
Sbjct: 534 GVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLS 593

Query: 483 IMKAFGVHPQKSTF 496
            M   G+ P   T+
Sbjct: 594 EMCLKGLSPNVVTY 607



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 221/450 (49%), Gaps = 9/450 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + LM+     G   +A +++N ++  G + ++VT+ +LL  L     F     +   +
Sbjct: 396 SYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLM 455

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            + G+ PD + +  +++   + G    A+  +  +   G   +T  +NT+I G+    K 
Sbjct: 456 LKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKM 515

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+ +  + M +E   +P+  TY  L+  +C   N+ EA+ V  KM    + P +  YN+
Sbjct: 516 IEAEETFNRM-KELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNS 574

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     ++ +  +  +++ EM   G+ PN  T G +I+G+C EG++ +A      M E G
Sbjct: 575 LIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKG 634

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA--GFMD- 370
             PN++I + ++     +     +DE   L+++  VN DV       +    A  G +D 
Sbjct: 635 FAPNVIICSKIVSSLYRL---GRIDEANMLLQKM-VNLDVFLDHGYFDRLHKADDGNLDS 690

Query: 371 -KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            K  +  D+  K+   P++  Y+I   G  +  + + A+++  +++  GF P+   + T+
Sbjct: 691 QKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTL 750

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G+ + G+++ A  + D+M + G++PN+ T+  L+ G  ++    RA+++   +   G+
Sbjct: 751 IHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGL 810

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            P   ++ +L +     G T+EA  + +K+
Sbjct: 811 APNVISYNILIDGYCKNGNTREALDLRNKM 840



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 196/456 (42%), Gaps = 71/456 (15%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G+  +    NA+IN + ++G + EA     +M +  L P + +Y+TL+ G+   G   ++
Sbjct: 354 GLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKA 413

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY----- 251
           + + + M R G ++ N+ T+N L++  C      +A +V H M   G+ PD V+Y     
Sbjct: 414 ISVYNEMLRVG-IQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLD 472

Query: 252 ------------------------------NTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
                                         NT+   + +  +  +AEE    M+  G +P
Sbjct: 473 LLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEP 532

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +G T   +I GYCK G ++EA +    M++  + P++ ++N LI G  +      V ++L
Sbjct: 533 DGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLL 592

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
           + M    ++P+V+TY T++  W   G +DK    + DM + G  P+    S +     R 
Sbjct: 593 SEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRL 652

Query: 402 QEPEKAEELLMTMI------ESGFH-----------------------------PNVVIF 426
              ++A  LL  M+      + G+                              PN V++
Sbjct: 653 GRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVY 712

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
              I+G C  G +D A ++F  +   G SP+  T+ TL+ GYS A     A  +   M  
Sbjct: 713 NIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLK 772

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            G+ P   T+  L      +G    A+++  K+  K
Sbjct: 773 RGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLK 808



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 112/485 (23%), Positives = 214/485 (44%), Gaps = 53/485 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S  KL++ L       E ++  N L+     PS   Y++L+    + + F        
Sbjct: 94  VNSHCKLVHILSRARMYDETRSYLNELV----TPSKNNYSSLVVWNELVRVF-------- 141

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
             E+    P    F+ ++  + E G ++ A+  F  M + G  P+  + N L+      G
Sbjct: 142 --EDFKFSP--TVFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKG 197

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +   ++ + D ++R G V P++ T +++V A+C +  +  A + + +M   G + +VVTY
Sbjct: 198 ESSNAILVYDHINRLGIV-PDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTY 256

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNG-----------RTC-------------- 286
           N++       G+ ++AE V+  M   G+  N            R C              
Sbjct: 257 NSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMER 316

Query: 287 -----------GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
                      G++I GYC+  K+ +A+R    M   G+  NL I N LI G+ +     
Sbjct: 317 SEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVS 376

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
             + +L  M ++ + P+  +YST+M+ +   G + K   ++++M + GI+ +   ++ L 
Sbjct: 377 EAERLLMRMVDWDLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLL 436

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
           KG  R    E A  +   M++ G  P+ V + T++      G   RA+ +++ +   G  
Sbjct: 437 KGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYG 496

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
            +   F T++ G+ +  +   AEE    MK  G  P   T+  L +     G  +EA ++
Sbjct: 497 RSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKV 556

Query: 516 LSKIK 520
             K++
Sbjct: 557 KEKME 561



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 173/415 (41%), Gaps = 36/415 (8%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R+  +   ++N   +  K  EA+  FN + E G +P  VTY TL+              +
Sbjct: 497 RSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKV 556

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++E+  + P    +N++I    +S    E MD   +M   GL+P   TY TLI G+  
Sbjct: 557 KEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCD 616

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM---------- 239
            G+ +++      M  +G   PN+   + +V +      I EA  ++ KM          
Sbjct: 617 EGRLDKAFTAYFDMIEKG-FAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHG 675

Query: 240 -------------------------AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
                                    + S   P+ V YN       ++G+ D A+++   +
Sbjct: 676 YFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSL 735

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G  P+  T   +I GY   G + +A      M + G+ PN++ +N LI G  +  + 
Sbjct: 736 LLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNL 795

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           D   ++   +    + P+VI+Y+ +++ +   G   +  ++ + M K GI P    YS L
Sbjct: 796 DRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSAL 855

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
             G+ ++ +  KA  LL  M E     N+  F  ++ G    G + +  ++ + M
Sbjct: 856 IYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKLHNMM 910



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/299 (20%), Positives = 131/299 (43%), Gaps = 11/299 (3%)

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           +E++ + ++F+ +P V  +  I+  +   G +     +FD+MGK G  P   + + L   
Sbjct: 135 NELVRVFEDFKFSPTV--FDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSS 192

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
            VR+ E   A  +   +   G  P+V   + +++ +C DG ++ A++   +M   G   N
Sbjct: 193 LVRKGESSNAILVYDHINRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELN 252

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + T+ +L+ G        RAE +L++M   G+   K T  LL +        +EA+++L 
Sbjct: 253 VVTYNSLIDGCVSIGDMERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLR 312

Query: 518 KIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQ--------IPNVVSSDQKGS 569
           +++  E     E    + ++   R+   +        +L         I N + +    +
Sbjct: 313 EMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKN 372

Query: 570 AAALKKGRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPLGQVGMYSQLA 628
               +  R+L+R  D  LE   ++ +++ +   C+ G     I     + +VG+ S + 
Sbjct: 373 GQVSEAERLLMRMVDWDLEPESYSYSTL-MDGFCREGLVTKAISVYNEMLRVGIQSNVV 430


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 212/438 (48%), Gaps = 4/438 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAI-FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           + T L+ +L    +  +A  I    + E G  P + +YTTLL  L  +K+      ++  
Sbjct: 181 TFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHM 240

Query: 133 VEENGMD--PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + E+G +  P+ + +  VI+ F + G++ +A   F KM + G+ P   T N++I G    
Sbjct: 241 MAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKV 300

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              +++  +L  M  E ++ PN  TYN L+  + +    TEA  ++ +M+  G +P+VVT
Sbjct: 301 QAMDKAEAVLQQMIDE-HIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVT 359

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +     ++G   +A E+   M  +G +PN  T G ++ GY  EG + +       M 
Sbjct: 360 YSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMV 419

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G+ P   +FN+ I  + +    D        M++    PD++ Y+T+++     G +D
Sbjct: 420 QNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLD 479

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                F  M   G+ PD   ++ L  G+    + EKAEEL   M++ G  PNV  F ++I
Sbjct: 480 DAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMI 539

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
                +G +  A ++FD M   G  PN+ ++ T++ GY  A +     ++L  M   G+ 
Sbjct: 540 DKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLK 599

Query: 491 PQKSTFLLLAEARRATGL 508
           P   TF  L +   + GL
Sbjct: 600 PTAVTFNTLLDGMVSMGL 617



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 211/475 (44%), Gaps = 40/475 (8%)

Query: 85  RGKPQEAQAIFNNLIEGGHK---PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           R  P  A ++FN +   G K   P + T+  L++        N   + + Q+ + G+   
Sbjct: 119 RDGPALAVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQ 178

Query: 142 SIFFNAVINAFSESGNMEEAMD-TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           ++ F  ++          +AM+    +M E G TP   +Y TL+KG     K EE+ +L+
Sbjct: 179 AVTFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELI 238

Query: 201 DLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
            +M+ +G N  PN+ +Y  ++  +  E ++ +A+ +  KM   G+ P+VVT N++     
Sbjct: 239 HMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLC 298

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +    D+AE V+ +M    + PN  T   +I GY   G+  EA+R  + M   G  PN+V
Sbjct: 299 KVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVV 358

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            +++LI    +        E+   M +    P+  TY ++++ ++T G +     + D M
Sbjct: 359 TYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLM 418

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            + G++P  H ++I    Y +    ++A      M + GF P++V +TT+I G C  G +
Sbjct: 419 VQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRL 478

Query: 440 DRAI-----------------------------------EVFDKMCEHGVSPNLKTFETL 464
           D A+                                   E+F +M + G+ PN+ TF ++
Sbjct: 479 DDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSM 538

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +    +  +   A ++  +M   G  P   ++  +       G   E  ++L  +
Sbjct: 539 IDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDM 593



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 200/434 (46%), Gaps = 57/434 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHK--PSLVTYTTLLAALTIQKRFNSIHSI 129
           V S T L+  L    K +EA  + + + E G    P++V+YTT++     +      +++
Sbjct: 215 VFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTL 274

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ ++G+ P+ +  N+VI+   +   M++A     +M +  + P  +TYN+LI GY  
Sbjct: 275 FCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLS 334

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +G+  E+V++L  MSR+G  +PN+ TY++L+   C      EA  + + M  SG KP+  
Sbjct: 335 SGQWTEAVRILKEMSRDGQ-RPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNAS 393

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY ++   YA  G       V   M  NG++P      I I  YCK G++ EA      M
Sbjct: 394 TYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKM 453

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG-- 367
           ++ G  P++V +  +I G  +I   D        M +  ++PD+IT++T+++ ++  G  
Sbjct: 454 QQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKW 513

Query: 368 ---------FMDK------------------------CKEIFDDMGKAGIKPDAHAYSIL 394
                     MD+                         +++FD M +AG KP+  +Y+ +
Sbjct: 514 EKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTM 573

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG-------------------WCS 435
             GY    E  +  +LL  M+  G  P  V F T++ G                    C 
Sbjct: 574 IHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCE 633

Query: 436 DGSMDRAIEVFDKM 449
           DG ++  + +F +M
Sbjct: 634 DGRIEDILTLFREM 647



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 214/476 (44%), Gaps = 47/476 (9%)

Query: 88  PQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH-------SIMSQVEENG--- 137
           P++A  +F+ L++     S+     LL  +      +S+        S+ +++   G   
Sbjct: 80  PEDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKK 139

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   F  +I+   ++G +        ++ ++GL     T+  L++      +  +++
Sbjct: 140 VAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAM 199

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG--MKPDVVTYNTIA 255
            ++     E    P++ +Y  L++  C EK   EA  ++H MA  G    P+VV+Y T+ 
Sbjct: 200 NIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVI 259

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + + G+  +A  +  +M  +G+ PN  TC  +I G CK   + +A    + M +  + 
Sbjct: 260 HGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIM 319

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN   +N LI G++          +L  M      P+V+TYS +++    +G   + +EI
Sbjct: 320 PNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREI 379

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVRE-----------------QEP-------------- 404
           F+ M ++G KP+A  Y  L  GY  E                   P              
Sbjct: 380 FNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCK 439

Query: 405 ----EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
               ++A      M + GF P++V +TT+I G C  G +D A+  F +M + G+SP++ T
Sbjct: 440 CGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIIT 499

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           F TL+ G++   +  +AEE+   M   G+ P  +TF  + +     G   EA+++ 
Sbjct: 500 FNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLF 555



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/383 (23%), Positives = 168/383 (43%), Gaps = 14/383 (3%)

Query: 154 ESGNM--EEAMDTFWKMKESGLTPTTSTYNTLIKGYG-------IAGKPEESVKLLDLMS 204
            SG++  E+A+D F ++ +     +    N L+           +   P  +V + + M+
Sbjct: 74  RSGDLGPEDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMA 133

Query: 205 REG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN-TIATAYAQN 261
           R G   V P++ T+ +L+   C+   +   +  + ++  +G++   VT+   + T  A+ 
Sbjct: 134 RAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEK 193

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG--VHPNLV 319
             +D    V+  M   G  P+  +   ++ G C E K +EA      M E G    PN+V
Sbjct: 194 RTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVV 253

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            +  +I GF +  D      +   M +  + P+V+T +++++       MDK + +   M
Sbjct: 254 SYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQM 313

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
               I P+   Y+ L  GY+   +  +A  +L  M   G  PNVV ++ +I   C  G  
Sbjct: 314 IDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLH 373

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             A E+F+ M + G  PN  T+ +L+ GY+          +  +M   G+ P +  F + 
Sbjct: 374 AEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIE 433

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
             A    G   EA    +K++ +
Sbjct: 434 IYAYCKCGRLDEASLTFNKMQQQ 456



 Score = 45.8 bits (107), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 31/154 (20%), Positives = 65/154 (42%), Gaps = 19/154 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++ L + GK  EA+ +F+ +   G KP++V+Y T++    I      +  ++ 
Sbjct: 532 VNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLD 591

Query: 132 QVEENGMDPDSIFFNAV-------------------INAFSESGNMEEAMDTFWKMKESG 172
            +   G+ P ++ FN +                   I++  E G +E+ +  F +M    
Sbjct: 592 DMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKA 651

Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
               T T N  ++G  +      S  ++ L + E
Sbjct: 652 DKTDTITENIKLRGVTVKASYHCSSVVISLKALE 685


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/490 (26%), Positives = 230/490 (46%), Gaps = 43/490 (8%)

Query: 69  CRTVRSMTKLM-NSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           C ++ S+  L+    ++ G    A   F  +   G KPS+ T   +LA++   KR   + 
Sbjct: 159 CNSIPSVFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVW 218

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           S+  ++ + G+ P+   FN +IN     GN+++A +   +M+E+G  PT  TYNTL+  Y
Sbjct: 219 SLFREMSDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWY 278

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G+ + +++L+D M  +G ++ ++ TYNV +   C      +A+ ++ KM    + P+
Sbjct: 279 CKKGRYKAAIELIDYMICKG-IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPN 337

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
            VTYNT+   + + G+   A +V  EM    + PN  T   +I G+C  G  +EALR   
Sbjct: 338 EVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLD 397

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV---ITYSTIMNAWS 364
            M+  G+  N V +  L+ G  +    +  +    L++  RVN  V   I Y+ +++   
Sbjct: 398 HMEAAGLRLNEVTYGTLLNGLCK---HEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLC 454

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G +D+  ++  +M K G+ PD   YS L  G+ R    + A+E++  M  SG   N +
Sbjct: 455 KNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKI 514

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKM------CEH-------------------------- 452
           I++T+I  +C  G++  A++V+  M       +H                          
Sbjct: 515 IYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHM 574

Query: 453 ---GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G+ PN  T++ ++ GY     P  A      M   G HP   T+  L +     G  
Sbjct: 575 SRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNL 634

Query: 510 KEAKRILSKI 519
            EAK+ L+++
Sbjct: 635 VEAKKFLNRL 644



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 201/418 (48%), Gaps = 1/418 (0%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           +K  C  V +   L+N L   G  ++A  +   + E G  P++VTY TLL     + R+ 
Sbjct: 226 DKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYK 285

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           +   ++  +   G++ D   +N  I+    +    +A     KM++  ++P   TYNTLI
Sbjct: 286 AAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLI 345

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G+   GK   + ++ + MS+  ++ PN  TYN L+   C+  +  EA  ++  M A+G+
Sbjct: 346 NGFVKEGKIGVAAQVFNEMSKF-DLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 404

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           + + VTY T+     ++ + + A+ ++  M  N +        ++I G CK G + EA++
Sbjct: 405 RLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQ 464

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               M + GV+P+++ ++ LI GF  + +     E++  M    +  + I YST++  + 
Sbjct: 465 LVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFC 524

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G + +  +++  M   G   D    ++L     R+ +  +AE+ L  M   G  PN +
Sbjct: 525 QHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSI 584

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            +  II+G+ S G    A   FD M + G  P+  T+ +L+ G  +      A++ L 
Sbjct: 585 TYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLN 642



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 127/504 (25%), Positives = 218/504 (43%), Gaps = 20/504 (3%)

Query: 32  IPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTK------------LM 79
           + A+  N   K  L  N    ++    HC     +E+ R +  M              L+
Sbjct: 356 VAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLL 415

Query: 80  NSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           N L +  K + A+ +   +         + YT L+  L      +    ++  + ++G++
Sbjct: 416 NGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVN 475

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD I ++++IN F   GN++ A +   +M  SGL      Y+TLI  +   G   E++K+
Sbjct: 476 PDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKV 535

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
             +M+  G+   +  T NVLV + C +  + EA   +  M+  G+ P+ +TY+ I   Y 
Sbjct: 536 YAVMNCNGHGADHF-TCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYG 594

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
             G+   A     +M   G  P+  T G ++ G CK G + EA +F   +       + V
Sbjct: 595 SIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSV 654

Query: 320 IFNLLIKGFVEIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++N L+    E      + E +AL   M +  V PD  TYS+++      G       +F
Sbjct: 655 MYNTLL---AETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 711

Query: 377 DD-MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
              MG+  + P+   Y+ L  G  +   P+ A      M++ G  P+ V F  II     
Sbjct: 712 GTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSR 771

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G M +A + F  M   GV PNL T+  L+ G+S+ +   R   +   M   G+ P K T
Sbjct: 772 RGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLT 831

Query: 496 FLLLAEARRATGLTKEAKRILSKI 519
           F  L      +G+     ++L K+
Sbjct: 832 FHSLILGLSKSGIPDLGVKLLGKM 855



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 228/537 (42%), Gaps = 32/537 (5%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-------IQKRFNSIHSIM 130
            ++N     G P  A + F+++I+ G  PS  TY +LL  L         +K  N +H I 
Sbjct: 589  IINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIP 648

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
              V       DS+ +N ++    +SGN+ EA+  F KM ++ + P + TY++L+ G    
Sbjct: 649  GAV-------DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRK 701

Query: 191  GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            GK   +V L       G + PN   Y  LV       +   A+    +M   G  PD V 
Sbjct: 702  GKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVA 761

Query: 251  YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            +N I  + ++ G+  +A +    M   GV PN  T  I++ G+ K+  +   L    TM 
Sbjct: 762  FNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMM 821

Query: 311  EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              G+ P+ + F+ LI G  +    D   ++L  M       D  T++ ++N +S +G M 
Sbjct: 822  REGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMR 881

Query: 371  KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
            K  ++ + M   G+ PD   Y+ +  G  ++    ++  +L  M+E+G  P    + T+I
Sbjct: 882  KAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLI 941

Query: 431  SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            +G C  G +  A ++ D+M   G   +      ++ G     +   A  +L  M    + 
Sbjct: 942  NGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLL 1001

Query: 491  PQKSTFLLL----------AEARRATGLTKEAKRILSKIKNKERTNEMEAEED--IPVES 538
            P  +TF  L          AEA +  G+ +     L  +        M A  D     E 
Sbjct: 1002 PTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFEL 1061

Query: 539  LERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATT 595
             E + H++      PN+     +V  D   +A  L +G  LL D       SW  +T
Sbjct: 1062 YEEMRHRDLC----PNITTYAVLV--DAISAANNLIQGEKLLTDLQERGLISWGGST 1112



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 98/417 (23%), Positives = 181/417 (43%), Gaps = 37/417 (8%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
            + + L+  L  +GK   A  +F   +  G   P+ V YT L+  L+      +      +
Sbjct: 690  TYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEE 749

Query: 133  VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY----- 187
            + + G  PD++ FNA+I++ S  G M +A D F  M+  G+ P  +TYN L+ G+     
Sbjct: 750  MMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQA 809

Query: 188  --------------GI----------------AGKPEESVKLLDLMSREGNVKPNLRTYN 217
                          GI                +G P+  VKLL  M  EG +     T+N
Sbjct: 810  LLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQF-TFN 868

Query: 218  VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            +L+  +     + +A+++++ M   G+ PD  TYN I     +     ++  V+ EM  N
Sbjct: 869  ILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLEN 928

Query: 278  GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
            GV P       +I+G C+ G I+ A +    M+  G   + V  + +++G +     +  
Sbjct: 929  GVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA 988

Query: 338  DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
              VL  M   R+ P + T++T+M+ +     + +  ++   M   G+K D  AY++L  G
Sbjct: 989  MLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMG 1048

Query: 398  YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
                 +   A EL   M      PN+  +  ++    +  ++ +  ++   + E G+
Sbjct: 1049 MCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1105



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 129/280 (46%), Gaps = 6/280 (2%)

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            ++ +   Y + G  D A E    +   G +P+  TC +I++   K+ + +      R M
Sbjct: 165 VFDLLIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREM 224

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            + G+ PN+  FN+LI G     +      +L  M+E    P ++TY+T++N +   G  
Sbjct: 225 SDKGICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRY 284

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
               E+ D M   GI+ D   Y++            KA  LL  M +    PN V + T+
Sbjct: 285 KAAIELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTL 344

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I+G+  +G +  A +VF++M +  +SPN  T+  L+ G+        A  +L  M+A G+
Sbjct: 345 INGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGL 404

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSK-IKNKERTNEM 528
              + T+  L       GL K  K  L+K +  + R N+M
Sbjct: 405 RLNEVTYGTLLN-----GLCKHEKFELAKRLLERMRVNDM 439



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/356 (23%), Positives = 157/356 (44%), Gaps = 36/356 (10%)

Query: 64   MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
            M K +C    +   +++S   RG+  +A   F+ +   G  P+L TY  LL   + ++  
Sbjct: 751  MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQAL 810

Query: 124  NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                S+ S +   G+ PD + F+++I   S+SG  +  +    KM   G      T+N L
Sbjct: 811  LRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNIL 870

Query: 184  IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
            I  Y  +GK  ++  L++ M+  G V P+  TYN +      +    E+  V+H+M  +G
Sbjct: 871  INKYSESGKMRKAFDLVNFMNTLG-VFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENG 929

Query: 244  MKPDVVTYNTIATAYAQNGEADQAEEVIVEME-------------------HNG------ 278
            + P    Y T+     + G+   A ++  EME                   H G      
Sbjct: 930  VIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAM 989

Query: 279  ----------VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
                      + P   T   ++  +C++ KI EAL+    M+  G+  ++V +N+LI G 
Sbjct: 990  LVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGM 1049

Query: 329  VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
                D     E+   M+   + P++ TY+ +++A S A  + + +++  D+ + G+
Sbjct: 1050 CANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1105


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 209/441 (47%), Gaps = 9/441 (2%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           R+   ++N L +     +A  +   + +G    P LVTY+T++     Q   +    I+ 
Sbjct: 42  RTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILR 101

Query: 132 Q-VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + V  +G+ PD + + +V++     G M+ A +   +MK  G+ P   T++ LI G+  A
Sbjct: 102 EMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNA 161

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K +E++KL   +    + KP++ TY  L+  +C   N+ +A  ++  M      P+VVT
Sbjct: 162 RKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVT 221

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+++     + G+ DQA ++   M   G  PN  T   +I G C   K+  A      M 
Sbjct: 222 YSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMT 281

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAG 367
                P+ V +N L+ G+  +     ++E   L KE       PD ITY+ ++  +  A 
Sbjct: 282 ATCCPPDTVSYNALLDGYCRL---GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNAS 338

Query: 368 FMDKCKEIFDDM-GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
            +++ + + ++M   AGI PD   YSI+  GY R +   +A E +  MI     PN V +
Sbjct: 339 RLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTY 398

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           +++I G C  G +D A+EV   M    V P++ TF +++           A ++L  M A
Sbjct: 399 SSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAA 458

Query: 487 FGVHPQKSTFLLLAEARRATG 507
            G+ P   T+  L E    TG
Sbjct: 459 HGLEPGMVTYTTLLEGFSRTG 479



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 117/494 (23%), Positives = 227/494 (45%), Gaps = 52/494 (10%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           + + ++N   ++G+   A  I   ++   G  P +VTYT+++  L    + +    ++ +
Sbjct: 79  TYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVRE 138

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK-MKESGLTPTTSTYNTLIKGYGIAG 191
           ++  G++PD   F+A+I  +  +  ++EA+  + + +  S   P   TY  LI G+  +G
Sbjct: 139 MKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSG 198

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E+++K+L +M     V PN+ TY+ L+   C   ++ +A ++  +M + G  P+VVTY
Sbjct: 199 NLEKAMKMLGVMEGRKCV-PNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTY 257

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+        + D A  ++ EM      P+  +   ++ GYC+ G+I+EA +  + M  
Sbjct: 258 TTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMAT 317

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR----VNPDVITYSTIMNAWSTAG 367
               P+ + +  L++GF    +   ++E   L++  +    ++PDV+TYS ++  +S A 
Sbjct: 318 KSCLPDRITYTCLVRGFC---NASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAK 374

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
              +  E   +M    + P+A  YS L  G  +    + A E+L  M+     P+V  F 
Sbjct: 375 RFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFN 434

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM--- 484
           ++I   C  G MD A ++   M  HG+ P + T+ TL+ G+S   +   A E+ ++M   
Sbjct: 435 SVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKK 494

Query: 485 ------------------------------KAFGV---------HPQKSTFLLLAEARRA 505
                                         KA  V          P +   L + +    
Sbjct: 495 AKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLR 554

Query: 506 TGLTKEAKRILSKI 519
            G T+EA ++++ I
Sbjct: 555 AGRTEEAGKLINSI 568



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 199/380 (52%), Gaps = 5/380 (1%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P  + +  +I+ F ++  +++A+  F KM+E  + P   TYN ++ G   A    ++ ++
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYEV 63

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA-SGMKPDVVTYNTIATAY 258
           L  M    +V P+L TY+ ++  +C +  +  A  ++ +M    G+ PDVVTY ++    
Sbjct: 64  LKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDGL 123

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR-FARTMKEYGVHPN 317
            ++G+ D+A E++ EM+  GV+P+  T   +I+G+C   K+ EAL+ +   +      P+
Sbjct: 124 CRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPD 183

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +  LI GF +  + +   ++L +M+  +  P+V+TYS++++    AG +D+  ++F 
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 243

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G  P+   Y+ L  G     + + A  L+  M  +   P+ V +  ++ G+C  G
Sbjct: 244 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLG 303

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK-AFGVHPQKSTF 496
            ++ A ++F +M      P+  T+  L+ G+  A +   A  +L+ MK A G+ P   T+
Sbjct: 304 RIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTY 363

Query: 497 -LLLAEARRATGLTKEAKRI 515
            +++A   RA    + A+ I
Sbjct: 364 SIVVAGYSRAKRFVEAAEFI 383



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 184/392 (46%), Gaps = 11/392 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++   + G  ++A  +   +      P++VTY++LL  L      +    +  
Sbjct: 184 VVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFR 243

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  P+ + +  +I+    +  ++ A     +M  +   P T +YN L+ GY   G
Sbjct: 244 RMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLG 303

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM-AASGMKPDVVT 250
           + EE+ +L   M+ +  + P+  TY  LVR +CN   + EA  ++  M  A+G+ PDVVT
Sbjct: 304 RIEEAKQLFKEMATKSCL-PDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 362

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +   Y++     +A E I EM    V PN  T   +I G CK G++  A+   + M 
Sbjct: 363 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMV 422

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              V P++  FN +I     + D D   ++L  M    + P ++TY+T++  +S  G M+
Sbjct: 423 NKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRME 482

Query: 371 KCKEIFDDM--------GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              E+F+ M          A + P+  A+S L +G  + +E +KA  ++  +      P 
Sbjct: 483 IAYELFEVMRKKAKKSSSAANLVPE-QAFSALIRGLCKAREIDKAMAVVEELRSRECEPA 541

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
                 I+ G    G  + A ++ + + + G+
Sbjct: 542 EEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 129/246 (52%), Gaps = 4/246 (1%)

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           QP   T  III G+CK  ++K+AL     M+E+ V PN   +N+++ G  +        E
Sbjct: 4   QPTVVTWTIIIDGFCKANQLKQALACFEKMREF-VAPNERTYNVVVNGLCKARLTSKAYE 62

Query: 340 VLALMKEFR-VNPDVITYSTIMNAWSTAGFMDKCKEIFDDM-GKAGIKPDAHAYSILAKG 397
           VL  M++ + V PD++TYST++N +   G MD+  EI  +M  + GI PD   Y+ +  G
Sbjct: 63  VLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV-SP 456
             R+ + ++A E++  M   G  P+   F+ +I+GWC+   +D A++++ ++       P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           ++ T+  L+ G+ ++    +A ++L +M+     P   T+  L       G   +A  + 
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 517 SKIKNK 522
            ++ +K
Sbjct: 243 RRMTSK 248



 Score = 43.1 bits (100), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 33/152 (21%), Positives = 67/152 (44%), Gaps = 9/152 (5%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +NK    +V +   ++ +L   G   EA  +   +   G +P +VTYTTLL   +   R 
Sbjct: 422 VNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRM 481

Query: 124 NSIHSIMSQVE--------ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTP 175
              + +   +            + P+   F+A+I    ++  +++AM    +++     P
Sbjct: 482 EIAYELFEVMRKKAKKSSSAANLVPEQA-FSALIRGLCKAREIDKAMAVVEELRSRECEP 540

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
                  ++ G   AG+ EE+ KL++ +S+ G
Sbjct: 541 AEEDCLAIVDGLLRAGRTEEAGKLINSISKVG 572


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 232/493 (47%), Gaps = 8/493 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++  +  G   EA  +   ++  G +P+ +TY  L+  L    + +    ++ Q+  + 
Sbjct: 333 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 392

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD+I +N +I       + ++A     +M+ +G++P   TY+ +I G   +G+PE++ 
Sbjct: 393 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 452

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ M+ +G +KPN   Y  L+  +C E N++ A  +  KM    + PD+  YN++   
Sbjct: 453 DLLEEMTTKG-LKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFG 511

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            ++ G  +++ +   +M+  G+ PN  T   +I GY K G ++ A +  + M + G+ PN
Sbjct: 512 LSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPN 571

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            VI+  L++ + +  D + V      M +  V  D   Y  +++  S++G M+    +  
Sbjct: 572 DVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLS 631

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            + K G  PD H YS L  G  +  + EKA  +L  M + G  PN+V +  +I G C  G
Sbjct: 632 GIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSG 691

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +  A  VF+ +   G+ PN  T+ +L+ G  +      A  +   M A G+ P    + 
Sbjct: 692 DISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYS 751

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI-------PVESLERLYHKEATTA 550
           +L     + G  ++A  ++ ++  +   +       +        ++   +L H      
Sbjct: 752 VLTTGCSSAGDLEQAMFLIEEMFLRGHASISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 811

Query: 551 SYPNLLQIPNVVS 563
             PN L I N++S
Sbjct: 812 LVPNALTIENIIS 824



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 215/445 (48%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L   G  +EA     ++ + G  P   TY  L+  L   +R N   +++ ++    
Sbjct: 263 LIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAE 322

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ + +  +I+ F   GN +EA     +M  +G+ P   TY+ L++G    G+ + + 
Sbjct: 323 LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRAS 382

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M R+ + +P+  TYN+++       +  +A+ ++ +M  +G+ P+V TY+ +   
Sbjct: 383 LLLKQMVRDSH-RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHG 441

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             Q+GE ++A +++ EM   G++PN      +ISGYC+EG +  A      M +  V P+
Sbjct: 442 LCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPD 501

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           L  +N LI G  ++   +   +  A M+E  + P+  TYS +++ +   G ++  +++  
Sbjct: 502 LYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQ 561

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G+KP+   Y  L + Y +  + EK      +M++ G   +  I+  +I    S G
Sbjct: 562 RMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSG 621

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
           +M+ A  V   + ++G  P++  + +L+ G  +     +A  IL  M   GV P    + 
Sbjct: 622 NMEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYN 681

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L +    +G    A+ + + I  K
Sbjct: 682 ALIDGLCKSGDISYARNVFNSILAK 706



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 208/429 (48%), Gaps = 8/429 (1%)

Query: 92  QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINA 151
           +A+  +   G H  +L  Y  +       + F++   ++ ++ E G   +++ +N +I  
Sbjct: 214 RAVEGSAARGRHGSALEAYCKV-------REFDTAKKVLVEMRERGCGLNTVTYNVLIAG 266

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP 211
              SG +EEA      M++ GL P   TY  LI G   + +  E+  LLD MS    +KP
Sbjct: 267 LCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSC-AELKP 325

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           N+  Y  L+  +  E N  EA+ ++ +M A+G++P+ +TY+ +     + G+ D+A  ++
Sbjct: 326 NVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLL 385

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            +M  +  +P+  T  +II G+ +    K+A R    M+  G+ PN+  ++++I G  + 
Sbjct: 386 KQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQS 445

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
            + +   ++L  M    + P+   Y+ +++ +   G +    EIFD M K  + PD + Y
Sbjct: 446 GEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCY 505

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + L  G  +    E++ +    M E G  PN   ++ +I G+  +G ++ A ++  +M +
Sbjct: 506 NSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLD 565

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            G+ PN   +  L+  Y ++    +     + M   GV      + +L     ++G  + 
Sbjct: 566 TGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEA 625

Query: 512 AKRILSKIK 520
           A R+LS I+
Sbjct: 626 AFRVLSGIE 634



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 195/424 (45%), Gaps = 6/424 (1%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+ +   + E G   + VTY  L+A L               +E+ G+ PD   + A+IN
Sbjct: 241 AKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALIN 300

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
              +S    EA     +M  + L P    Y  LI G+   G  +E+ K++  M   G V+
Sbjct: 301 GLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAG-VQ 359

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN  TY+ LVR  C    +  A  ++ +M     +PD +TYN I   + ++     A  +
Sbjct: 360 PNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRL 419

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + EME+ G+ PN  T  I+I G C+ G+ ++A      M   G+ PN  ++  LI G+  
Sbjct: 420 LSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCR 479

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
             +     E+   M +  V PD+  Y++++   S  G +++  + F  M + G+ P+   
Sbjct: 480 EGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFT 539

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YS L  GY++  + E AE+L+  M+++G  PN VI+  ++  +     +++    F  M 
Sbjct: 540 YSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSML 599

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           + GV  + + +  L+   S +     A  +L  ++  G  P    +     +   +GL K
Sbjct: 600 DQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVY-----SSLISGLCK 654

Query: 511 EAKR 514
            A R
Sbjct: 655 TADR 658



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/267 (24%), Positives = 122/267 (45%), Gaps = 33/267 (12%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + G    A+ +FN+++  G  P+ VTYT+L+         ++   + +++   G
Sbjct: 683 LIDGLCKSGDISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATG 742

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD+  ++ +    S +G++E+AM    +M   G   + S++N L+ G+   GK +E++
Sbjct: 743 ITPDAFVYSVLTTGCSSAGDLEQAMFLIEEMFLRG-HASISSFNNLVDGFCKRGKMQETL 801

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM-------------------HK 238
           KLL ++   G V PN  T   ++        ++E   +                      
Sbjct: 802 KLLHVIMGRGLV-PNALTIENIISGLSEAGKLSEVHTIFVELQQKTSESAARHFSSLFMD 860

Query: 239 MAASGMKP-DVVTYNTIATAYAQNGEADQA---EEVIVEMEHNGVQPNGRTCGI-IISGY 293
           M   G  P DVV  + +   + + G  D+A    +VIV        P G +  + I+   
Sbjct: 861 MINQGKIPLDVV--DDMIRDHCKEGNLDKALMLRDVIVAKS----APMGCSSYLAIVDNL 914

Query: 294 CKEGKIKEALRFARTMKEYG-VHPNLV 319
           C++GK+ EAL   + M + G + P LV
Sbjct: 915 CRKGKLSEALNLLKEMDKRGNLQPTLV 941



 Score = 43.1 bits (100), Expect = 0.49,   Method: Compositional matrix adjust.
 Identities = 31/161 (19%), Positives = 72/161 (44%), Gaps = 18/161 (11%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ S   L++   +RGK QE   + + ++  G  P+ +T   +++ L+   + + +H+I 
Sbjct: 780 SISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGKLSEVHTIF 839

Query: 131 SQVEENGMDP-----DSIFFNAV-------------INAFSESGNMEEAMDTFWKMKESG 172
            ++++   +       S+F + +             I    + GN+++A+     +    
Sbjct: 840 VELQQKTSESAARHFSSLFMDMINQGKIPLDVVDDMIRDHCKEGNLDKALMLRDVIVAKS 899

Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
                S+Y  ++      GK  E++ LL  M + GN++P L
Sbjct: 900 APMGCSSYLAIVDNLCRKGKLSEALNLLKEMDKRGNLQPTL 940


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 221/448 (49%), Gaps = 2/448 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ ++  L+N      +  EA A+ + ++E G++P  VT+TTL+  L    + +   +++
Sbjct: 144 SIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALV 203

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G  PD + + AVIN   + G  + A++   KM++  +      YNT+I G    
Sbjct: 204 ERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKY 263

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              +++  L + M  +G +KP++ TYN L+   CN    ++A  ++  M    + PD+V 
Sbjct: 264 KHMDDAFDLFNKMETKG-IKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVF 322

Query: 251 YNTIATAYAQNGEADQAEEVIVEM-EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +N +  A+ + G+  +AE++  EM +     P+      +I G+CK  +++E +   R M
Sbjct: 323 FNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREM 382

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            + G+  N V +  LI GF +  D D    V   M    V+PD++TY+ +++     G +
Sbjct: 383 SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNV 442

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +    +F+ M K  +K D   Y+ + +   +  + E   +L  ++   G  PNVV +TT+
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           +SG+C  G  + A  +F +M E G  PN  T+ TL+           + E+++ M++ G 
Sbjct: 503 MSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGF 562

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILS 517
               STF L+        L K    +LS
Sbjct: 563 AGDASTFGLVTNMLHDGRLDKSFLDMLS 590



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 204/431 (47%), Gaps = 2/431 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            +N    R +   A AI   +++ G+ PS+VT  +LL       R +   +++ Q+ E G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD++ F  +++   +     EA+    +M   G  P   TY  +I G    G+P+ ++
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ M + G ++ ++  YN ++   C  K++ +A+++ +KM   G+KPDV TYN + + 
Sbjct: 236 NLLNKMEK-GKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISC 294

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-KEYGVHP 316
               G    A  ++ +M    + P+      +I  + KEGK+ EA +    M K     P
Sbjct: 295 LCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFP 354

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++V +N LIKGF +    +   EV   M +  +  + +TY+T+++ +  A   D  + +F
Sbjct: 355 DVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVF 414

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             M   G+ PD   Y+IL  G       E A  +   M +     ++V +TT+I   C  
Sbjct: 415 KQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKA 474

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G ++   ++F  +   GV PN+ T+ T+M G+        A+ +   MK  G  P   T+
Sbjct: 475 GKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTY 534

Query: 497 LLLAEARRATG 507
             L  AR   G
Sbjct: 535 NTLIRARLRDG 545



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/525 (23%), Positives = 242/525 (46%), Gaps = 57/525 (10%)

Query: 42  KKQLYSNSKPTDSQPQTHCSFCMNK-------ESCRTVRSMTKLMNSLIERGKPQEAQAI 94
           KK L+ ++      P+T  + C  +       + CR       L   +++  K  +A  +
Sbjct: 10  KKCLHRHTVLLKGNPRT--TLCWERSFAGASSDDCRE-----NLSRKVLQDLKLDDAIGL 62

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD--------------- 139
           F ++++    PS+V ++ LL+A+    +F+ + S+  Q++  G+                
Sbjct: 63  FGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCR 122

Query: 140 --------------------PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
                               P  +  N+++N F     + EA+    +M E G  P T T
Sbjct: 123 RSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVT 182

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           + TL+ G     K  E+V L++ M  +G  +P+L TY  ++   C       A N+++KM
Sbjct: 183 FTTLVHGLFQHNKASEAVALVERMVVKG-CQPDLVTYGAVINGLCKRGEPDLALNLLNKM 241

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
               ++ DVV YNTI     +    D A ++  +ME  G++P+  T   +IS  C  G+ 
Sbjct: 242 EKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRW 301

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVE----IMDRDGVDEVLALMKEFRVNPDVIT 355
            +A R    M E  ++P+LV FN LI  FV+    +      DE   ++K     PDV+ 
Sbjct: 302 SDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE---MVKSKHCFPDVVA 358

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+T++  +     +++  E+F +M + G+  +   Y+ L  G+ + ++ + A+ +   M+
Sbjct: 359 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 418

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G HP+++ +  ++ G C++G+++ A+ VF+ M +  +  ++ T+ T++    +A +  
Sbjct: 419 SDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVE 478

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
              ++   +   GV P   T+  +       GL +EA  +  ++K
Sbjct: 479 DGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMK 523



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/234 (20%), Positives = 103/234 (44%)

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           ++S   K  K    +     M+  G+  NL  +++ I  F           +L  M +  
Sbjct: 81  LLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLG 140

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             P ++T ++++N +     + +   + D M + G +PD   ++ L  G  +  +  +A 
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            L+  M+  G  P++V +  +I+G C  G  D A+ + +KM +  +  ++  + T++ G 
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGL 260

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            + +    A ++   M+  G+ P   T+  L       G   +A R+LS +  K
Sbjct: 261 CKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK 314



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 47/199 (23%), Positives = 93/199 (46%), Gaps = 9/199 (4%)

Query: 337 VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
           +D+ + L   M + R  P ++ +S +++A +     D    + + M   GI  + + YSI
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
               + R  +   A  +L  M++ G+ P++V   ++++G+C    +  A+ + D+M E G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
             P+  TF TL+ G  +  +   A  +++ M   G  P   T+          GL K  +
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTY-----GAVINGLCKRGE 230

Query: 514 RILS-KIKNKERTNEMEAE 531
             L+  + NK    ++EA+
Sbjct: 231 PDLALNLLNKMEKGKIEAD 249


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 227/454 (50%), Gaps = 7/454 (1%)

Query: 61  SFCMNKE-SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           SFC  +  S +T     +++ + +   +  +A  +F  + +    PS++ ++ LL+A+  
Sbjct: 31  SFCRRRAFSGKTSYDYREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAK 90

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
             +F+ + S   ++E  G+  +   +N +IN F     +  A+    KM + G  P   T
Sbjct: 91  MNKFDLVISFGEKMEILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVT 150

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
            N+L+ G+    +  ++V L+D M   G  KP+  T+  L+         +EA  ++ +M
Sbjct: 151 LNSLLNGFCHGNRISDAVALVDQMVEMG-YKPDTVTFTTLIHGLFLHNKASEAVALIDRM 209

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
              G +PD+VTY  +     + G+ D A  ++ +ME   ++ N      +I   CK    
Sbjct: 210 VQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 269

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            +AL     M+  GV PN++ ++ LI              +L+ M E ++NP+++T+S +
Sbjct: 270 DDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSAL 329

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++A+   G + K ++++++M K  I P+   YS L  G+       +A+++L  MI    
Sbjct: 330 IDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDC 389

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            PNVV + T+I+G+C    +D+ +E+F +M + G+  N  T+ TL+ G+ +AR    A+ 
Sbjct: 390 LPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 449

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           + + M + GVHP   T+ +L +     GL K  K
Sbjct: 450 VFKQMVSVGVHPNILTYNILLD-----GLCKNGK 478



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/369 (23%), Positives = 155/369 (42%), Gaps = 42/369 (11%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           +++A+  F  M +S   P+   ++ L+       K +  +   + M   G +  NL TYN
Sbjct: 59  LDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILG-ISHNLYTYN 117

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +L+  +C    ++ A  ++ KM   G +PD+VT N++                       
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSL----------------------- 154

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
                       ++G+C   +I +A+     M E G  P+ V F  LI G   +   +  
Sbjct: 155 ------------LNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHG---LFLHNKA 199

Query: 338 DEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
            E +AL   M +    PD++TY  ++N     G  D    + + M  A I+ +   YS +
Sbjct: 200 SEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTV 259

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
                + +  + A  L   M   G  PNV+ ++++IS  C+ G    A  +   M E  +
Sbjct: 260 IDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKI 319

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
           +PNL TF  L+  + +  +  +AE++ + M    + P   T+  L           EAK+
Sbjct: 320 NPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQ 379

Query: 515 ILSKIKNKE 523
           +L  +  K+
Sbjct: 380 MLELMIRKD 388



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 89/192 (46%), Gaps = 3/192 (1%)

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
           +E+ D  G+  V+A  + F   P +I +S +++A +     D      + M   GI  + 
Sbjct: 57  IELDDAIGLFGVMAQSRPF---PSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNL 113

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
           + Y+IL   + R      A  LL  M++ G+ P++V   ++++G+C    +  A+ + D+
Sbjct: 114 YTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQ 173

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M E G  P+  TF TL+ G     +   A  ++  M   G  P   T+  +       G 
Sbjct: 174 MVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGD 233

Query: 509 TKEAKRILSKIK 520
           T  A  +L+K++
Sbjct: 234 TDLALNLLNKME 245



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 63/129 (48%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           + K+    V +   L+N   +  +  +   +F  + + G   + VTYTTL+      +  
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           ++   +  Q+   G+ P+ + +N +++   ++G + +AM  F  ++ S + P   TYN +
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504

Query: 184 IKGYGIAGK 192
           I+G   AGK
Sbjct: 505 IEGMCKAGK 513


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/464 (23%), Positives = 217/464 (46%), Gaps = 9/464 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +N  S   V     L+  L   G+  +A+ +          P ++ Y  ++A      + 
Sbjct: 96  LNPPSPAAVGPCAALIKKLCASGRTADARRVL-----AASGPDVMVYNAMVAGYCGAGQL 150

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           ++   +++ +    ++PD+  +N +I      G    A+     M   G  P   TY  L
Sbjct: 151 DAARRLVADMP---VEPDAYTYNTLIRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTIL 207

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++        ++++KLLD M  +G   P++ TYNV++   C E  + +A   +  + + G
Sbjct: 208 LEATCKRSGYKQAMKLLDEMHDKG-CAPDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYG 266

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
            +P+ V+YN +          + AE+++ EM H G  PN  T  ++IS  C+ G ++ A+
Sbjct: 267 CEPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAM 326

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M +YG  PN + +N L+  F +        E + LM      PD+++Y+T++ A 
Sbjct: 327 EVLEQMPQYGCTPNSLSYNPLLHAFCKQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTAL 386

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G +D   E+   +   G  P   +Y+ +  G  +  + ++A ELL  M   G  P++
Sbjct: 387 CRNGEVDVAIELLHQLKDKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDI 446

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           + ++TI SG C +  ++ A+  F K+ + G+ P    +  ++ G  + R+   A ++   
Sbjct: 447 ITYSTIASGLCREDRIEEAVRTFCKVQDMGIRPTAALYNAILLGLCKRRETHNAIDLFAY 506

Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNE 527
           M + G  P +ST+ +L E     GL KEA+ + +++ ++   N+
Sbjct: 507 MISSGCMPNESTYTILVEGLAYEGLVKEARELFAQLCSRGVVNK 550



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 67/140 (47%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   +++ L + GK +EA  + + +   G +P ++TY+T+ + L  + R         +V
Sbjct: 413 SYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKV 472

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++ G+ P +  +NA++    +      A+D F  M  SG  P  STY  L++G    G  
Sbjct: 473 QDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLV 532

Query: 194 EESVKLLDLMSREGNVKPNL 213
           +E+ +L   +   G V   L
Sbjct: 533 KEARELFAQLCSRGVVNKKL 552


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/499 (26%), Positives = 230/499 (46%), Gaps = 75/499 (15%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           ++AIF+++I+ G + +  T+  L+    I+ + +    ++ +++     PD++ +N +++
Sbjct: 32  SKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEAIGLIGKMKHFSCFPDNVSYNTILD 91

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
              + G + EA D    MK +GL P  +T+N L+ GY   G  +E+ +++D+M+R  NV 
Sbjct: 92  VLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVIDIMARN-NVL 150

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P++RTY  L+   C +  I EA+ +  +M    + P VVTYN +     +   + +  E+
Sbjct: 151 PDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFEL 210

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           I EME  GV+PN  T  +++  Y KEGK+  A    R M+E G  P+ V FN L  G+ +
Sbjct: 211 IDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCK 270

Query: 331 I------------MDRDG-------------------------------------VDEV- 340
                        M R G                                     VDEV 
Sbjct: 271 AGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVS 330

Query: 341 --LALMKEFRVN--------------PDVITYSTIMNAWSTAG----FMDKCKEIFDDMG 380
               +M  F+V               P +ITY T++     +G     +DKC E+ +   
Sbjct: 331 YGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLE--- 387

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
            +G+ PD   Y+ +  GY RE + +KA      M++  F P++     ++ G C++G +D
Sbjct: 388 -SGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLD 446

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
           +A+++F      G + +  TF T++ G  E  +   A ++L  M+   + P   T   + 
Sbjct: 447 KALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAIL 506

Query: 501 EARRATGLTKEAKRILSKI 519
            A    G  KEA+  +S I
Sbjct: 507 SALADAGRMKEAEEFMSGI 525



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/321 (32%), Positives = 166/321 (51%), Gaps = 12/321 (3%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG---NVKPNLRTYNVLVRAWC 224
           MK   L P   T NTLIK   +    + SV L   +  +     V+ N  T+N+L+   C
Sbjct: 1   MKRLHLKPNLLTLNTLIKAL-VRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCC 59

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
            E  ++EA  ++ KM      PD V+YNTI     + G+ ++A +++++M++NG+ PN  
Sbjct: 60  IENKLSEAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRN 119

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLAL 343
           T  I++SGYCK G +KEA      M    V P++  +  LI G      +DG +DE   L
Sbjct: 120 TFNILVSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLC----KDGKIDEAFRL 175

Query: 344 ---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
              M+  ++ P V+TY+ ++N         K  E+ D+M   G+KP+A  Y+++ K YV+
Sbjct: 176 RDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVK 235

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
           E + + A   L  M ESGF P+ V F T+ +G+C  G +  A  + D+M   G+  N  T
Sbjct: 236 EGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVT 295

Query: 461 FETLMWGYSEARQPWRAEEIL 481
             T++      R+   A ++L
Sbjct: 296 LNTILHTLCGERKLDDAYKLL 316



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 205/447 (45%), Gaps = 35/447 (7%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIH---SIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
           KP+L+T  TL+ AL       S++   +I S V + G++ ++  FN +I        + E
Sbjct: 7   KPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSE 66

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A+    KMK     P   +YNT++      GK  E+  LL  M   G + PN  T+N+LV
Sbjct: 67  AIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNG-LFPNRNTFNILV 125

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
             +C    + EA  V+  MA + + PDV TY T+     ++G+ D+A  +  EME+  + 
Sbjct: 126 SGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLL 185

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+  T  ++I+G  +     +       M+  GV PN V +N+++K +V+    D     
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L  M+E   +PD +T++T+ N +  AG + +   + D+M + G+K ++   + +      
Sbjct: 246 LRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCG 305

Query: 401 EQEPEKAEELLMTMIESGFH-------------------------------PNVVIFTTI 429
           E++ + A +LL +  + G+                                P+++ + T+
Sbjct: 306 ERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTM 365

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G C  G  D++I+  +++ E G+ P+  T+ T++ GY    Q  +A      M     
Sbjct: 366 IGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSF 425

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRIL 516
            P   T  +L       G+  +A ++ 
Sbjct: 426 KPDLFTCNILVRGLCTEGMLDKALKLF 452



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 161/334 (48%), Gaps = 4/334 (1%)

Query: 138 MDPDSIFFNAVINA---FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           + P+ +  N +I A   +    ++  +   F  + + G+   T+T+N LI G  I  K  
Sbjct: 6   LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           E++ L+  M +  +  P+  +YN ++   C +  + EA +++  M  +G+ P+  T+N +
Sbjct: 66  EAIGLIGKM-KHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNIL 124

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
            + Y + G   +A EVI  M  N V P+ RT   +I G CK+GKI EA R    M+   +
Sbjct: 125 VSGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKL 184

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P++V +N+LI G  E        E++  M+   V P+ +TY+ ++  +   G MD    
Sbjct: 185 LPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGN 244

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
               M ++G  PD   ++ L+ GY +     +A  ++  M   G   N V   TI+   C
Sbjct: 245 ELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLC 304

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            +  +D A ++     + G   +  ++ TL+ GY
Sbjct: 305 GERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGY 338



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 99/428 (23%), Positives = 188/428 (43%), Gaps = 46/428 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N   E     +   + + +   G KP+ VTY  ++     + + ++  + + 
Sbjct: 188 VVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELR 247

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++EE+G  PD + FN + N + ++G + EA     +M   GL   + T NT++       
Sbjct: 248 KMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGER 307

Query: 192 KPEESVKLLDLMSREG------------------------------NVKPNLRTYNVLVR 221
           K +++ KLL   S+ G                               + P++ TY  ++ 
Sbjct: 308 KLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIG 367

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C      ++ +  +++  SG+ PD  TYNTI   Y + G+ D+A     +M     +P
Sbjct: 368 GLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKP 427

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  TC I++ G C EG + +AL+  +T    G   + V FN +I G  E    +   ++L
Sbjct: 428 DLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLL 487

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
           A M+E ++ PD  T++ I++A + AG M + +E                  I+ +G +++
Sbjct: 488 AEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMS--------------GIVEQGKLQD 533

Query: 402 Q--EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           Q     K +    +       PN V F+  I+  C+ G    A+ +  +  + G+  +  
Sbjct: 534 QTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQKGIILHKS 593

Query: 460 TFETLMWG 467
           T+ +LM G
Sbjct: 594 TYISLMEG 601



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 53/265 (20%), Positives = 104/265 (39%), Gaps = 13/265 (4%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           KE   ++ +   ++  L   GK  ++    N L+E G  P   TY T++     + + + 
Sbjct: 353 KEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDK 412

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
                +++ +    PD    N ++      G +++A+  F      G      T+NT+I 
Sbjct: 413 AFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAVTFNTIIS 472

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G    G+ EE+  LL  M  E  + P+  T+N ++ A  +   + EA   M  +   G  
Sbjct: 473 GLCEEGRFEEAFDLLAEM-EEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGIVEQGKL 531

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
            D            Q    ++ +            PN       I+  C +GK K+A+  
Sbjct: 532 QD------------QTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHM 579

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVE 330
            +   + G+  +   +  L++G ++
Sbjct: 580 IQESTQKGIILHKSTYISLMEGLIK 604


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 186/391 (47%), Gaps = 1/391 (0%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           TYT LL  L          S+ + ++ +G  PD   +  +++    +G   EA       
Sbjct: 144 TYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDA 203

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
              G  P    YN LI GY   G  E +V + + M   G   PN+RTY  L+  +C  + 
Sbjct: 204 MAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNG-CSPNVRTYTELISGFCKSRK 262

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           +  A  +  +M  +G+ P+VVTY  +      +G+ D A  ++  ME++G+ PN  TC +
Sbjct: 263 LDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSV 322

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +I   CK  ++ EA     ++ + G+  N +++  LI G  +       D ++  +    
Sbjct: 323 LIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQG 382

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             PD  TYS++++       + +   + DDM + G++P    Y+I+    VRE   + ++
Sbjct: 383 FVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSK 442

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           ++L  MI +G  P+V  +T  +  +C +G M+ A  +   M +HGV PNL T+  L+ GY
Sbjct: 443 KILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGY 502

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           +      +A    + M A G  P + ++ +L
Sbjct: 503 ANLGLTSQAFSTFKHMVANGCKPNEESYTVL 533



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 193/396 (48%), Gaps = 1/396 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           RT  + T L++ L   G  +EA ++F  +   G  P    Y T++  L    R     ++
Sbjct: 140 RTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETL 199

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           +S     G +P+ + +NA+I+ +   G++E A+D F +M  +G +P   TY  LI G+  
Sbjct: 200 LSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCK 259

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           + K + ++ L   M   G V PN+ TY  L++  C++  +  A+ ++  M  SG+ P+  
Sbjct: 260 SRKLDRAMMLFSRMVDAGLV-PNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEW 318

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           T + +  A  ++    +A+ ++  +   G++ N      +I G CK G+   A R  +T+
Sbjct: 319 TCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTL 378

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G  P+   ++ LI G     +      VL  M E  V P  +TY+ I++        
Sbjct: 379 VSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGA 438

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D  K+I D M  AGIKPD   Y+I  + Y  E   E AE +++ M++ G  PN+V +  +
Sbjct: 439 DGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNAL 498

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           I G+ + G   +A   F  M  +G  PN +++  L+
Sbjct: 499 ICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLL 534



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 169/376 (44%), Gaps = 3/376 (0%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +  +INA+  +G++  +      +  +G  P +  Y + + GY  AG    + +L  LM 
Sbjct: 75  YTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMP 134

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
             G V+    TY  L+   C    + EA +V   M A G  PD   Y T+       G  
Sbjct: 135 LRGCVRTAF-TYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGRT 193

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +AE ++ +    G +PN      +I GYC  G ++ A+     M   G  PN+  +  L
Sbjct: 194 REAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTEL 253

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I GF +    D    + + M +  + P+V+TY+ ++    + G +D    +   M  +G+
Sbjct: 254 ISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSGL 313

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+    S+L     + +   +A+ LL ++I+ G   N +++T++I G C  G    A  
Sbjct: 314 VPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADR 373

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-LLLAEAR 503
           +   +   G  P+  T+ +L+ G    ++   A  +L  M   GV P   T+ +++ E  
Sbjct: 374 LMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELV 433

Query: 504 RATGLTKEAKRILSKI 519
           R  G    +K+IL K+
Sbjct: 434 REVG-ADGSKKILDKM 448



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 104/468 (22%), Positives = 213/468 (45%), Gaps = 19/468 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           VR+ T+L++   +  K   A  +F+ +++ G  P++VTYT L+       + +  + ++ 
Sbjct: 247 VRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQ 306

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +E +G+ P+    + +I+A  +   + EA      + + G+      Y +LI G   AG
Sbjct: 307 SMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAG 366

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +   + +L+  +  +G V P+  TY+ L+   C +K ++EA  V+  M   G++P  VTY
Sbjct: 367 RFAAADRLMQTLVSQGFV-PDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTY 425

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             I     +   AD +++++ +M   G++P+  T  I +  YC EG++++A      M +
Sbjct: 426 TIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVD 485

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM----------- 360
           +GV PNLV +N LI G+  +            M      P+  +Y+ ++           
Sbjct: 486 HGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNN 545

Query: 361 ------NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
                 + W  A  M     + ++M K  +  +   Y+       R    ++A+ LL+ M
Sbjct: 546 IPANSVSIWKIAE-MKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEM 604

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
             +   P+  ++T+II+  C    +  A+   D M + G  P L+++  ++    E    
Sbjct: 605 QSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSI 664

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             A+++   M +   + ++  + +L +     G   E   +LS ++ K
Sbjct: 665 QTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEK 712



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 177/411 (43%), Gaps = 19/411 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++L +  +  EAQ +  +LI+ G K + + YT+L+  L    RF +   +M  +   G
Sbjct: 323 LIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQG 382

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD+  ++++I+       + EAM     M E G+ P+  TY  +I         + S 
Sbjct: 383 FVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSK 442

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+LD M   G +KP++ TY + VR++C+E  + +A ++M  M   G+ P++VTYN +   
Sbjct: 443 KILDKMIAAG-IKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICG 501

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG-------------KIKEALR 304
           YA  G   QA      M  NG +PN  +  +++    K+              KI E ++
Sbjct: 502 YANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAE-MK 560

Query: 305 FARTMKEYGVHPNLV----IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           +   + E  V   L     I+N  +     +   D    +L  M+   + P    Y++I+
Sbjct: 561 YLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSII 620

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
                   + +     D M K+G  P   +Y  +      E   + A+++   M+   ++
Sbjct: 621 ACCCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYN 680

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
              + +  +I G    G +     +   M E    P+   +  L    ++A
Sbjct: 681 YEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALYARLTGKITDA 731



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/319 (20%), Positives = 132/319 (41%), Gaps = 20/319 (6%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +++ L+       ++ I + +I  G KP + TYT  + +   + R      +M  + +
Sbjct: 426 TIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVD 485

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +G+ P+ + +NA+I  ++  G   +A  TF  M  +G  P   +Y  L++   +  K E 
Sbjct: 486 HGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLR---LLIKKES 542

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           S           N+  N       V  W     +     ++ +M    +  ++  YN   
Sbjct: 543 S----------NNIPAN------SVSIW-KIAEMKYLHGLLEEMVKLQLPSEIDIYNCFL 585

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           T+  +    D+A+ +++EM+   + P+      II+  C+   + EAL F  +M + G  
Sbjct: 586 TSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYI 645

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P L  +  +I    E        +V   M     N + I +  +++     G++ +C  +
Sbjct: 646 PQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSL 705

Query: 376 FDDMGKAGIKPDAHAYSIL 394
              M +   +P    Y+ L
Sbjct: 706 LSVMEEKNYRPSDALYARL 724



 Score = 58.9 bits (141), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 43/230 (18%), Positives = 94/230 (40%), Gaps = 17/230 (7%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI-- 126
           C  + +   L+      G   +A + F +++  G KP+  +YT LL  L  ++  N+I  
Sbjct: 489 CPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKPNEESYTVLLRLLIKKESSNNIPA 548

Query: 127 --------------HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG 172
                         H ++ ++ +  +  +   +N  + +      ++EA     +M+ + 
Sbjct: 549 NSVSIWKIAEMKYLHGLLEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSAN 608

Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA 232
           LTP+   Y ++I          E++  +D M + G + P L +Y  ++ + C E +I  A
Sbjct: 609 LTPSEDVYTSIIACCCRLKMLTEALTFVDSMVKSGYI-PQLESYRHIISSLCEEGSIQTA 667

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
             V   M +     + + +  +     Q G   +   ++  ME    +P+
Sbjct: 668 KQVFGDMLSKEYNYEEIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPS 717


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 221/452 (48%), Gaps = 1/452 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S   LM+   + G    A++ F  +I+ G  P + +Y  LL  L +           
Sbjct: 269 SVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFT 328

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + +E +G++PD + +N + N F   G +  A     +M  +GL P   TY  LI G+   
Sbjct: 329 NDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQM 388

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  EES KL + M  +G +K ++ TY VL+ + C    I EA  ++H+M   G+KPD++T
Sbjct: 389 GNIEESFKLKEKMLSQG-LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +     + G  ++A E+  EM    + PN   C  IISG  ++G I EA  +  ++ 
Sbjct: 448 YSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 507

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           +  V   ++++N++I G+ ++ +          + E  ++P ++T+++++  +   G + 
Sbjct: 508 KSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLA 567

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  ++ D +   G+ P +  Y+ L  GY  E +     ++L  M      P  + +T ++
Sbjct: 568 EAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVV 627

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C +G +  ++++   M   G+ P+  T+ T++  + +A    +A ++   M    + 
Sbjct: 628 KGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQ 687

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+ +L       G  K+A R+L  ++++
Sbjct: 688 PSPVTYNVLINGLCVYGNLKDADRLLVTLQDQ 719



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 214/426 (50%), Gaps = 7/426 (1%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           ++N +   G   +  T   L+  L  Q R     + + +       P  + FNA+++ F 
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFC 281

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           + G+++ A   F  M + GL P   +YN L+ G  +AG  EE+++  + M   G V+P++
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHG-VEPDI 340

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            TYN+L   +     I+ AW V+ +M  +G+ PD+VTY  +   + Q G  +++ ++  +
Sbjct: 341 VTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEK 400

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M   G++ +  T  +++S  CK G+I EA+     M+  G+ P+L+ +++LI G  +   
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCK--- 457

Query: 334 RDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           R  V+E + L +E    R+ P+    S I++     G + + +  FD + K+ +  +   
Sbjct: 458 RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIIL 517

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+I+  GY +     +A      +IE G  P +V F ++I G+C  G +  A+++ D + 
Sbjct: 518 YNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIK 577

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
            HG+ P   T+ TLM GY E        ++L  M+A  + P + T+ ++ +     G   
Sbjct: 578 VHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLH 637

Query: 511 EAKRIL 516
           E+ ++L
Sbjct: 638 ESVQLL 643



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 96/421 (22%), Positives = 196/421 (46%), Gaps = 1/421 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ + T L++SL + G+  EA  + + +   G KP L+TY+ L+  L  +        + 
Sbjct: 409 SIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELY 468

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++    + P+S   +A+I+   E G + EA   F  + +S +      YN +I GY   
Sbjct: 469 EEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKL 528

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E+V+    +  +G + P + T+N L+  +C +  + EA  ++  +   G+ P  VT
Sbjct: 529 GNIGEAVRSYKQIIEKG-ISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVT 587

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+   Y + G+     +++ EME   ++P   T  +++ G CKEG++ E+++  + M 
Sbjct: 588 YTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMY 647

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P+ + +N +I+ F +  D     ++   M +  + P  +TY+ ++N     G + 
Sbjct: 648 ARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLK 707

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               +   +    I+    AY+ + K +  + + + A      M+E GF  ++  ++ +I
Sbjct: 708 DADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVI 767

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +  C    +  A   F  M  HG+ P+      ++  +  +  P    EI  +M   G+ 
Sbjct: 768 NRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLL 827

Query: 491 P 491
           P
Sbjct: 828 P 828



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 78/325 (24%), Positives = 160/325 (49%), Gaps = 16/325 (4%)

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           D +++ ++ +  A+S +  + +A+    KMK   L  + +TYN+L+           +++
Sbjct: 165 DLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLY----------NLR 214

Query: 199 LLDLM------SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             D+M       +   V  N  T  +L+   C +  + +A   + +       P VV++N
Sbjct: 215 HTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFN 274

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            + + + + G  D A+     M   G+ P+  +  I++ G C  G ++EAL F   M+ +
Sbjct: 275 ALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENH 334

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           GV P++V +N+L  GF  +    G  +V+  M    +NPD++TY+ ++      G +++ 
Sbjct: 335 GVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEES 394

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            ++ + M   G+K     Y++L     +    ++A  LL  M   G  P+++ ++ +I G
Sbjct: 395 FKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHG 454

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPN 457
            C  G+++ AIE++++MC   + PN
Sbjct: 455 LCKRGAVEEAIELYEEMCSKRIYPN 479



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/180 (26%), Positives = 86/180 (47%), Gaps = 3/180 (1%)

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           VLA MK   +   + TY++++        M    ++++++  +G+  + +   IL  G  
Sbjct: 190 VLAKMKVLNLQVSIATYNSLLYNLRHTDIM---WDVYNEIKASGVPQNEYTNPILIDGLC 246

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           R+   + A   L       F P+VV F  ++SG+C  GS+D A   F  M ++G+ P++ 
Sbjct: 247 RQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVY 306

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           ++  L+ G   A     A E    M+  GV P   T+ +LA   R  GL   A +++ ++
Sbjct: 307 SYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRM 366


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 105/461 (22%), Positives = 225/461 (48%), Gaps = 1/461 (0%)

Query: 60  CSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           C  C ++ +        +++ + I   K  ++  +F ++++    PS+  ++ LL+A++ 
Sbjct: 34  CGLCFSRRAYSGGSDYREMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISK 93

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
            K+++ +  +  Q++  G+  +    N ++N F     +  A+    KM + G  P   T
Sbjct: 94  MKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVT 153

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           + +L+ G+    +  +++ + D M   G  +PN+  YN ++   C  K +  A +++++M
Sbjct: 154 FGSLLNGFCRGDRIYDALYMFDRMVEMG-YEPNVVIYNTIIDGLCKSKQVDNALDLLNRM 212

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
              G++PD VTYN++ +    +G  D A  ++  M    + P+  T   +I    KEG+I
Sbjct: 213 EVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRI 272

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            EA      M    + P++V ++LLI G       D  +++   M      PDV+TYS +
Sbjct: 273 SEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSIL 332

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +N +  +  ++   ++F +M + G+  +   Y++L +GY R  +   AEE+   M+  G 
Sbjct: 333 INGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGV 392

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            PN++ +  ++ G C +G +++A+ +   M + G+  ++ T+  ++ G  +A +   A +
Sbjct: 393 PPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWD 452

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +   +   G+ P   T+  +       GL  EA  +  K+K
Sbjct: 453 LYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMK 493



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 75/167 (44%), Gaps = 2/167 (1%)

Query: 46  YSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKP 105
           Y  SK  +   +  C     +   R   + T L+      GK   A+ IF  ++  G  P
Sbjct: 336 YCKSKKVEHGMKLFCEM-SQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPP 394

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
           +++TY  LL  L    +      I++ ++++GMD D + +N +I    ++G + +A D +
Sbjct: 395 NIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLY 454

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
             +   GLTP   TY  ++ G    G   E+  L   M  +G + PN
Sbjct: 455 CSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDG-ILPN 500


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 222/455 (48%), Gaps = 14/455 (3%)

Query: 80  NSLIER----GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           NSLI+     G  +E + + + + + G    +VTY  L+   +   R    +S   +++ 
Sbjct: 239 NSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKR 298

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+  + + F+  ++AF + G ++EAM  F +M+  G+ P   TY +L+ G   AG+ ++
Sbjct: 299 QGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDD 358

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++ LLD M  +G V PN+ TY V+V   C E  + EA NV+  M   G+K + + Y T+ 
Sbjct: 359 AIVLLDEMVHQGLV-PNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLI 417

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             +  N  +++A +++ +M++ G++ +    G +I G CK+ K+ EA      M   G+ 
Sbjct: 418 HGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLR 477

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN VI+  ++    +         +L  + +    P+V+TY  +++    AG + +    
Sbjct: 478 PNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISH 537

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F+ M + G+ P+  AY+ L  G+ +     KA  L+  MI+ G   + V++T++I G+  
Sbjct: 538 FNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMK 597

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
             ++  A  +  KM E G+  +L  +   + G+        A  +L  M   G+ P K+ 
Sbjct: 598 QANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTV 657

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEA 530
           +  L    +  G  +EA  +          NEME+
Sbjct: 658 YNCLIRKYQKLGNMEEASSL---------QNEMES 683



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 203/421 (48%), Gaps = 1/421 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T+  N ++ R        +   L +    P++ T+  ++  L  +       ++  +++ 
Sbjct: 169 TRTCNHILLRLARNRQGGLVRRLFDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKA 228

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  PD + +N++I+ + + G++EE      +M++SG      TYN LI  +   G+ E+
Sbjct: 229 MGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEK 288

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +      M R+G V  N+ T++  V A+C E  + EA  +  +M   GM P+  TY ++ 
Sbjct: 289 AYSYFGEMKRQG-VVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLV 347

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G  D A  ++ EM H G+ PN  T  +++ G CKEGK+ EA      M+  GV 
Sbjct: 348 DGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVK 407

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            N +++  LI G     + +   ++L  MK   +  DV  Y T++        +D+ K +
Sbjct: 408 ANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSL 467

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
              M   G++P+   Y+ +     +  +  +A  LL  +++SGF PNVV +  +I G C 
Sbjct: 468 LHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCK 527

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            GS+  AI  F+KM E G+ PN++ +  L+ G+ +     +A  ++  M   G+   K  
Sbjct: 528 AGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVV 587

Query: 496 F 496
           +
Sbjct: 588 Y 588



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 187/383 (48%), Gaps = 1/383 (0%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P+   FN VI+   + G + EA   F +MK  G +P   TYN+LI GYG  G  EE  +L
Sbjct: 198 PNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQL 257

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           +  M + G    ++ TYN L+  +     + +A++   +M   G+  +VVT++T   A+ 
Sbjct: 258 VSEMRKSG-CAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFC 316

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           + G   +A ++  +M   G+ PN  T   ++ G CK G++ +A+     M   G+ PN+V
Sbjct: 317 KEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 376

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            + +++ G  +       D VL+LM+   V  + + Y+T+++        ++  ++ + M
Sbjct: 377 TYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQM 436

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G++ D   Y  L  G  ++Q+ ++A+ LL  M   G  PN VI+TTI+      G  
Sbjct: 437 KNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKE 496

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             A+ +  K+ + G  PN+ T+  L+ G  +A     A      M+  G+ P    +  L
Sbjct: 497 SEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTAL 556

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
            +     G   +A  +++++ +K
Sbjct: 557 IDGFCKIGSLNKAMHLMNEMIDK 579



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 186/399 (46%), Gaps = 36/399 (9%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + +  +++  + G  QEA  +F  +   G  P+  TYT+L+       R +    ++ 
Sbjct: 305 VVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLD 364

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ P+ + +  +++   + G + EA +    M+  G+      Y TLI G+ +  
Sbjct: 365 EMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNN 424

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E ++ LL+ M  +G ++ ++  Y  L+   C ++ + EA +++HKMA  G++P+ V Y
Sbjct: 425 NSERALDLLNQMKNKG-MELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIY 483

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            TI  A  + G+  +A  ++ ++  +G QPN  T   +I G CK G I EA+     M+E
Sbjct: 484 TTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRE 543

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN+  +  LI GF +I                                   G ++K
Sbjct: 544 LGLDPNVQAYTALIDGFCKI-----------------------------------GSLNK 568

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + ++M   G+  D   Y+ L  GY+++   + A  L   MIESG   ++  +T  IS
Sbjct: 569 AMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDLYCYTCFIS 628

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           G+C+   M  A  V  +M   G++P+   +  L+  Y +
Sbjct: 629 GFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQK 667



 Score =  129 bits (323), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 156/348 (44%), Gaps = 41/348 (11%)

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC------------------- 286
           P VV  +T+ +  A +G  D A   +  +    V PN RTC                   
Sbjct: 134 PSVV--DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRL 191

Query: 287 ------------GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
                        I+I   CKEG++ EA      MK  G  P++V +N LI G+ +  D 
Sbjct: 192 FDLLPVPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGDL 251

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           + V+++++ M++     DV+TY+ ++N +S  G M+K    F +M + G+  +   +S  
Sbjct: 252 EEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVTFSTF 311

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
              + +E   ++A +L   M   G  PN   +T+++ G C  G +D AI + D+M   G+
Sbjct: 312 VDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGL 371

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            PN+ T+  ++ G  +  +   A+ +L +M+  GV   +  +  L         ++ A  
Sbjct: 372 VPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALD 431

Query: 515 ILSKIKNKERTNEMEAE--------EDIPVESLERLYHKEATTASYPN 554
           +L+++KNK    ++           +D  V+  + L HK A     PN
Sbjct: 432 LLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPN 479



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 78/308 (25%), Positives = 143/308 (46%), Gaps = 1/308 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++ L + GK  EA  + + +  GG K + + YTTL+    +         +++
Sbjct: 375 VVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLYTTLIHGHFMNNNSERALDLLN 434

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q++  GM+ D   +  +I    +   ++EA     KM   GL P T  Y T++     AG
Sbjct: 435 QMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAG 494

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  E+V LL  +   G  +PN+ TY  L+   C   +I+EA +  +KM   G+ P+V  Y
Sbjct: 495 KESEAVALLHKILDSG-FQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAY 553

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +   + + G  ++A  ++ EM   G+  +      +I GY K+  +++A      M E
Sbjct: 554 TALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIE 613

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  +L  +   I GF  +        VL+ M    + PD   Y+ ++  +   G M++
Sbjct: 614 SGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEE 673

Query: 372 CKEIFDDM 379
              + ++M
Sbjct: 674 ASSLQNEM 681



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 104/200 (52%), Gaps = 1/200 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +M++L + GK  EA A+ + +++ G +P++VTY  L+  L      +   S  +++ E
Sbjct: 484 TTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRE 543

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+DP+   + A+I+ F + G++ +AM    +M + G++     Y +LI GY      ++
Sbjct: 544 LGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQD 603

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  L   M   G ++ +L  Y   +  +CN   + EA  V+ +M  +G+ PD   YN + 
Sbjct: 604 AFALKTKMIESG-LQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLI 662

Query: 256 TAYAQNGEADQAEEVIVEME 275
             Y + G  ++A  +  EME
Sbjct: 663 RKYQKLGNMEEASSLQNEME 682


>gi|242093812|ref|XP_002437396.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
 gi|241915619|gb|EER88763.1| hypothetical protein SORBIDRAFT_10g026180 [Sorghum bicolor]
          Length = 786

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 208/434 (47%), Gaps = 1/434 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   EA A F +L   GH P +VTY  LL        +     ++ ++E++G  PD++ +
Sbjct: 258 GLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKAGNYTEALRVLKEMEQDGCQPDAVTY 317

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +   ++ +G  EEA      M   GL P   TYNT++  YG  GK +E++ L D M +
Sbjct: 318 NELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFTYNTVMTAYGNIGKVDEALALFDQMKK 377

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G V PN+ TYN ++     +   T    ++ +M+ SG  P+ VT+NT+     + G  D
Sbjct: 378 SGCV-PNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMED 436

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
               V+  M+  GV+ +  T   +I+ Y + G    A +    M   G  P L  +N L+
Sbjct: 437 YVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFAPCLTTYNALL 496

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                  D      +++ M+     P+  +YS ++  ++  G +     I  ++    + 
Sbjct: 497 NVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIAGIDAIEKEVYGGTVF 556

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P       L     + +     E+    +   G++P++VIF +++S +  +G   +  E+
Sbjct: 557 PSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSMLSMYAKNGMYSKVTEI 616

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           FD + + G+SP+L T+ +LM  Y++  + W AE+IL  +K+  V P   ++  +      
Sbjct: 617 FDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCK 676

Query: 506 TGLTKEAKRILSKI 519
            GL KEA+RILS++
Sbjct: 677 QGLIKEAQRILSEM 690



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 125/476 (26%), Positives = 218/476 (45%), Gaps = 9/476 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           VR+ T ++++L   G+ + A  +F  L   G  P+LVTY  +L     + + +  I +++
Sbjct: 173 VRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALL 232

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G++PD    + VI A    G ++EA+  F  +K  G TP   TYN L++ +G A
Sbjct: 233 DEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNALLQVFGKA 292

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E++++L  M ++G  +P+  TYN L   +       EA   +  M + G+ P+  T
Sbjct: 293 GNYTEALRVLKEMEQDG-CQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGLLPNAFT 351

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+ TAY   G+ D+A  +  +M+ +G  PN  T   I+    K+ +    L     M 
Sbjct: 352 YNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMS 411

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PN V +N ++    +    D V  VL  MK   V     TY+T++ A+   G   
Sbjct: 412 RSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRT 471

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              +++++M  AG  P    Y+ L     R+ +   A+ ++  M   GF PN   ++ ++
Sbjct: 472 NAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLL 531

Query: 431 SGWCSDGSMDRAIEVFDKMCEHG-VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             +   G++   I+  +K    G V P+     TL+    + R+    E+  Q +KA G 
Sbjct: 532 QCYAKGGNI-AGIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGY 590

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHK 545
           +P    F  +       G+  +   I   IK    + ++     I   SL  +Y K
Sbjct: 591 NPDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDL-----ITYNSLMDMYAK 641



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/414 (22%), Positives = 180/414 (43%), Gaps = 36/414 (8%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  EA A+F+ + + G  P++ TY  +L  L  + RF  +  ++ ++  +G  P+ + +
Sbjct: 363 GKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTW 422

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++    + G  +        MK  G+  +  TYNTLI  YG  G    + K+ + M+ 
Sbjct: 423 NTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTS 482

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG--- 262
            G   P L TYN L+     + + + A +++ KM   G KP+  +Y+ +   YA+ G   
Sbjct: 483 AG-FAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSYSLLLQCYAKGGNIA 541

Query: 263 --------------------------------EADQAEEVIVEMEHNGVQPNGRTCGIII 290
                                                E+   E++  G  P+      ++
Sbjct: 542 GIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVKARGYNPDLVIFNSML 601

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
           S Y K G   +      ++K+ G+ P+L+ +N L+  + +  +    +++L  +K  +V 
Sbjct: 602 SMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKSSQVK 661

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           PDV++Y+T++N +   G + + + I  +M   G+ P    Y  L  GY   +   +A E+
Sbjct: 662 PDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCVVTYHTLVGGYASLEMFSEAREV 721

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           +  MI+    P  + +  ++  +C     + A     ++ E   + + K   TL
Sbjct: 722 INYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSEVSETDPNFDKKVLHTL 775



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 160/358 (44%), Gaps = 4/358 (1%)

Query: 147 AVINAFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           +++ A   SG+ E A+    W   E       S    +++  G  G+ +    LLD M  
Sbjct: 108 SLLKALELSGHWEWALALLRWAGAEGA--ADASALEMVVRALGREGQHDAVCALLDEMPL 165

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA- 264
               + ++R Y  ++ A         A  +  ++   G+ P +VTYN +   Y + G + 
Sbjct: 166 PPGSRLDVRAYTTVLHALSRAGRYERAVELFAELRRQGVAPTLVTYNVVLDVYGRMGRSW 225

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +   ++ EM   GV+P+  T   +I+  C++G + EA+ F   +K  G  P +V +N L
Sbjct: 226 PRIVALLDEMRAAGVEPDDFTASTVIAACCRDGLVDEAVAFFEDLKARGHTPCVVTYNAL 285

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           ++ F +  +      VL  M++    PD +TY+ +   ++ AGF ++  +  D M   G+
Sbjct: 286 LQVFGKAGNYTEALRVLKEMEQDGCQPDAVTYNELAGTYARAGFYEEAAKCLDTMTSKGL 345

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+A  Y+ +   Y    + ++A  L   M +SG  PNV  +  I+            +E
Sbjct: 346 LPNAFTYNTVMTAYGNIGKVDEALALFDQMKKSGCVPNVNTYNFILGMLGKKSRFTVMLE 405

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           +  +M   G +PN  T+ T++    +         +L+ MK+ GV   + T+  L  A
Sbjct: 406 MLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMKSCGVELSRDTYNTLIAA 463



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 157/325 (48%), Gaps = 16/325 (4%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G    A  ++N +   G  P L TY  LL  L+ Q  +++  SI+S++   G  P+   +
Sbjct: 468 GSRTNAFKMYNEMTSAGFAPCLTTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNDQSY 527

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLI------KGYGIAGKPEESVK 198
           + ++  +++ GN+   +D   K    G + P+     TL+      +  G   K  + VK
Sbjct: 528 SLLLQCYAKGGNIA-GIDAIEKEVYGGTVFPSWVILRTLVIANFKCRRLGGIEKAFQEVK 586

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
                +R  N  P+L  +N ++  +      ++   +   +  SG+ PD++TYN++   Y
Sbjct: 587 -----ARGYN--PDLVIFNSMLSMYAKNGMYSKVTEIFDSIKQSGLSPDLITYNSLMDMY 639

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
           A+  E+ +AE+++ +++ + V+P+  +   +I+G+CK+G IKEA R    M   G+ P +
Sbjct: 640 AKCSESWEAEKILNQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPCV 699

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           V ++ L+ G+  +       EV+  M +  + P  +TY  +++++  A   ++ +    +
Sbjct: 700 VTYHTLVGGYASLEMFSEAREVINYMIQHNLKPMELTYRRVVDSYCKAKRFEEARSFLSE 759

Query: 379 MGKAGIKPDAHAYSILAKGYVREQE 403
           + +     D      LA  Y+ + +
Sbjct: 760 VSETDPNFDKKVLHTLA-AYIEDAQ 783


>gi|222630937|gb|EEE63069.1| hypothetical protein OsJ_17877 [Oryza sativa Japonica Group]
          Length = 702

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 211/434 (48%), Gaps = 1/434 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   +A A F +L   GH P +VTY  LL        +     ++ ++E++G  PD++ +
Sbjct: 174 GLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTY 233

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +   ++ +G  EEA      M   GL P T TYNT++  Y   G+ +E++ L D M +
Sbjct: 234 NELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKK 293

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G V PN+ TYN++      +   T    ++ +M+ SG  P+ VT+NT+     + G  D
Sbjct: 294 NGYV-PNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMED 352

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
               V+  M+  GV+ +  T   +IS Y + G    A +    M   G  P L  +N L+
Sbjct: 353 YVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALL 412

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                  D      +++ M +    P+  +YS ++  ++  G     + I  ++    I 
Sbjct: 413 NVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIF 472

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P       L     + +  E  E+    +   G+ P++VIF ++++ +  +G   +A E+
Sbjct: 473 PSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEM 532

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           FD + + G+SP+L T+ +LM  Y+++ + W AE+IL+ +K+  V P   ++  +      
Sbjct: 533 FDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCK 592

Query: 506 TGLTKEAKRILSKI 519
            GL KEA+RILS++
Sbjct: 593 QGLIKEAQRILSEM 606



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/487 (22%), Positives = 221/487 (45%), Gaps = 34/487 (6%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+    + G   EA  +   + + G +P  VTY  L         F      + 
Sbjct: 195 VVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLD 254

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ P++  +N V+ A++  G ++EA+  F +MK++G  P  +TYN +    G   
Sbjct: 255 TMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKS 314

Query: 192 KPEESVKLLDLMSREG----------------------------------NVKPNLRTYN 217
           +    +++L+ MSR G                                   V+ +  TYN
Sbjct: 315 RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYN 374

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            L+ A+    + T A+ +  +M +SG  P + TYN +    ++ G+   A+ ++ +M  N
Sbjct: 375 TLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN 434

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G +PN ++  +++  Y K G         + +    + P+ VI   L+    +    +GV
Sbjct: 435 GFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGV 494

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           ++    +K     PD++ +++++  ++  G   K  E+FD + ++G+ PD   Y+ L   
Sbjct: 495 EKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDM 554

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           Y +  E  +AE++L  +  S   P+VV + T+I+G+C  G +  A  +  +M   G++P 
Sbjct: 555 YAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPC 614

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + T+ TL+ GY+       A E++  M    + P + T+  + ++        EA+  LS
Sbjct: 615 VVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLS 674

Query: 518 KIKNKER 524
           +I + ++
Sbjct: 675 EISDTDQ 681



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 161/363 (44%), Gaps = 37/363 (10%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP----------- 193
           +  V++A S +G  E A+  F +++  G+ PT  TYN ++  YG  G+            
Sbjct: 92  YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 151

Query: 194 -------------------------EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
                                    +++V   + +   G+V P + TYN L++ +    N
Sbjct: 152 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHV-PCVVTYNALLQVFGKAGN 210

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
            TEA  V+ +M  SG +PD VTYN +A  YA+ G  ++A + +  M   G+ PN  T   
Sbjct: 211 YTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNT 270

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +++ Y   G++ EAL     MK+ G  PN+  +NL+     +      + E+L  M    
Sbjct: 271 VMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 330

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             P+ +T++T++      G  D    + + M   G++     Y+ L   Y R      A 
Sbjct: 331 CTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAF 390

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           ++   MI SGF P +  +  +++     G    A  +  KM ++G  PN +++  L+  Y
Sbjct: 391 KMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCY 450

Query: 469 SEA 471
           ++ 
Sbjct: 451 AKG 453



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 81/354 (22%), Positives = 154/354 (43%), Gaps = 4/354 (1%)

Query: 151 AFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           A   SG+ E A+    W   E       +    +++  G  G+ +    LLD M      
Sbjct: 28  ALELSGHWEWALALLRWASDEGA--ADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGS 85

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA-DQAE 268
           + ++R Y  ++ A         A  +  ++   G+ P +VTYN +   Y + G +  +  
Sbjct: 86  RLDVRAYTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIV 145

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            ++ EM   GV+P+  T   +I+   ++G + +A+ F   +K  G  P +V +N L++ F
Sbjct: 146 ALLEEMRAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVF 205

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +  +      VL  M++    PD +TY+ +   ++ AGF ++  +  D M   G+ P+ 
Sbjct: 206 GKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNT 265

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y+ +   Y      ++A  L   M ++G+ PNV  +  I             +E+ ++
Sbjct: 266 FTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEE 325

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           M   G +PN  T+ T++    +         +L  MK+ GV   + T+  L  A
Sbjct: 326 MSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISA 379



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 2/138 (1%)

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTM-IESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           DA A  ++ +   RE + +   +LL  M +  G   +V  +TT++      G  +RA+++
Sbjct: 52  DAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQL 111

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPW-RAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           F ++   GV P + T+  ++  Y    + W R   +L+ M+A GV P   T   +  A  
Sbjct: 112 FAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACG 171

Query: 505 ATGLTKEAKRILSKIKNK 522
             GL  +A      +K +
Sbjct: 172 RDGLLDQAVAFFEDLKAR 189


>gi|115462947|ref|NP_001055073.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|50878350|gb|AAT85125.1| unknown protein, contains pentatricopeptide (PPR) repeat, PF01535
           [Oryza sativa Japonica Group]
 gi|113578624|dbj|BAF16987.1| Os05g0275000 [Oryza sativa Japonica Group]
 gi|215695094|dbj|BAG90285.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 793

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 211/434 (48%), Gaps = 1/434 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   +A A F +L   GH P +VTY  LL        +     ++ ++E++G  PD++ +
Sbjct: 265 GLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTY 324

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +   ++ +G  EEA      M   GL P T TYNT++  Y   G+ +E++ L D M +
Sbjct: 325 NELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKK 384

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G V PN+ TYN++      +   T    ++ +M+ SG  P+ VT+NT+     + G  D
Sbjct: 385 NGYV-PNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMED 443

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
               V+  M+  GV+ +  T   +IS Y + G    A +    M   G  P L  +N L+
Sbjct: 444 YVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALL 503

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                  D      +++ M +    P+  +YS ++  ++  G     + I  ++    I 
Sbjct: 504 NVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIF 563

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P       L     + +  E  E+    +   G+ P++VIF ++++ +  +G   +A E+
Sbjct: 564 PSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEM 623

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           FD + + G+SP+L T+ +LM  Y+++ + W AE+IL+ +K+  V P   ++  +      
Sbjct: 624 FDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCK 683

Query: 506 TGLTKEAKRILSKI 519
            GL KEA+RILS++
Sbjct: 684 QGLIKEAQRILSEM 697



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/487 (22%), Positives = 221/487 (45%), Gaps = 34/487 (6%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+    + G   EA  +   + + G +P  VTY  L         F      + 
Sbjct: 286 VVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLD 345

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ P++  +N V+ A++  G ++EA+  F +MK++G  P  +TYN +    G   
Sbjct: 346 TMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKS 405

Query: 192 KPEESVKLLDLMSREG----------------------------------NVKPNLRTYN 217
           +    +++L+ MSR G                                   V+ +  TYN
Sbjct: 406 RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYN 465

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            L+ A+    + T A+ +  +M +SG  P + TYN +    ++ G+   A+ ++ +M  N
Sbjct: 466 TLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN 525

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G +PN ++  +++  Y K G         + +    + P+ VI   L+    +    +GV
Sbjct: 526 GFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGV 585

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           ++    +K     PD++ +++++  ++  G   K  E+FD + ++G+ PD   Y+ L   
Sbjct: 586 EKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDM 645

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           Y +  E  +AE++L  +  S   P+VV + T+I+G+C  G +  A  +  +M   G++P 
Sbjct: 646 YAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPC 705

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + T+ TL+ GY+       A E++  M    + P + T+  + ++        EA+  LS
Sbjct: 706 VVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLS 765

Query: 518 KIKNKER 524
           +I + ++
Sbjct: 766 EISDTDQ 772



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 161/363 (44%), Gaps = 37/363 (10%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP----------- 193
           +  V++A S +G  E A+  F +++  G+ PT  TYN ++  YG  G+            
Sbjct: 183 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 242

Query: 194 -------------------------EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
                                    +++V   + +   G+V P + TYN L++ +    N
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHV-PCVVTYNALLQVFGKAGN 301

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
            TEA  V+ +M  SG +PD VTYN +A  YA+ G  ++A + +  M   G+ PN  T   
Sbjct: 302 YTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNT 361

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +++ Y   G++ EAL     MK+ G  PN+  +NL+     +      + E+L  M    
Sbjct: 362 VMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 421

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             P+ +T++T++      G  D    + + M   G++     Y+ L   Y R      A 
Sbjct: 422 CTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAF 481

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           ++   MI SGF P +  +  +++     G    A  +  KM ++G  PN +++  L+  Y
Sbjct: 482 KMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCY 541

Query: 469 SEA 471
           ++ 
Sbjct: 542 AKG 544



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 88/393 (22%), Positives = 173/393 (44%), Gaps = 8/393 (2%)

Query: 112 TLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF-WKMKE 170
           +L+AA++ Q    S+ + +S   +  +  D     +++ A   SG+ E A+    W   E
Sbjct: 84  SLVAAISSQP-LPSLPAFLSSRRDELLRSD---LPSLLKALELSGHWEWALALLRWASDE 139

Query: 171 SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
                  +    +++  G  G+ +    LLD M      + ++R Y  ++ A        
Sbjct: 140 GA--ADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYE 197

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA-DQAEEVIVEMEHNGVQPNGRTCGII 289
            A  +  ++   G+ P +VTYN +   Y + G +  +   ++ EM   GV+P+  T   +
Sbjct: 198 RALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTV 257

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           I+   ++G + +A+ F   +K  G  P +V +N L++ F +  +      VL  M++   
Sbjct: 258 IAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGC 317

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            PD +TY+ +   ++ AGF ++  +  D M   G+ P+   Y+ +   Y      ++A  
Sbjct: 318 QPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALA 377

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L   M ++G+ PNV  +  I             +E+ ++M   G +PN  T+ T++    
Sbjct: 378 LFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCG 437

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           +         +L  MK+ GV   + T+  L  A
Sbjct: 438 KRGMEDYVTRVLNGMKSCGVELSRDTYNTLISA 470



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 2/138 (1%)

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTM-IESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           DA A  ++ +   RE + +   +LL  M +  G   +V  +TT++      G  +RA+++
Sbjct: 143 DAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQL 202

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPW-RAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           F ++   GV P + T+  ++  Y    + W R   +L+ M+A GV P   T   +  A  
Sbjct: 203 FAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACG 262

Query: 505 ATGLTKEAKRILSKIKNK 522
             GL  +A      +K +
Sbjct: 263 RDGLLDQAVAFFEDLKAR 280


>gi|357485117|ref|XP_003612846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514181|gb|AES95804.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 892

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 226/475 (47%), Gaps = 44/475 (9%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           + A  I   +   G  P++VTY T +  L     F     ++  +       ++  FNAV
Sbjct: 227 RRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWRLIQNLCRKNQPLNNHCFNAV 286

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           I    + G ++EA + F +MK SG+ P   +Y+ LI G+   G+ +++ ++   M R   
Sbjct: 287 IYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEM-RNSG 345

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           + PN+ +Y++L+  +C E  + +A  V  +M  SG+ PDV +Y+ +   + + G+ D A 
Sbjct: 346 ILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAI 405

Query: 269 EVIVEMEHN-----------------------------------GVQPNGRTCGIIISGY 293
           +   EM  N                                   G+ P+   C  I+S Y
Sbjct: 406 KFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIY 465

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE----VLALMKEFRV 349
           C++    +AL  +   +E GVH N   +N     F+  + R  V E    +L +M +  V
Sbjct: 466 CRKPDFNKALALSEKFQENGVHFNPYSYN----EFIHRICRGSVPEKALQLLPVMLKRNV 521

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            PDV+ YST+++ ++     +K   +F  M K GI  +   Y+IL   ++ + + + A  
Sbjct: 522 LPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYR 581

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L   M ES  +P+ + +T++++G+C+ G M RA  +FD+M   G SPN+ T+   +  Y 
Sbjct: 582 LFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYL 641

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
           +  +  +A ++ + MK  GV+P +  + +L  A   TG    A+ +  ++K + R
Sbjct: 642 KLNKNNQAHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGR 696



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 207/444 (46%), Gaps = 37/444 (8%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           L + G   EA  +F  +   G  P + +Y+ L+     + R +    +  ++  +G+ P+
Sbjct: 290 LCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPN 349

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
              ++ +I+ F + G +++A++ F +MK SG+ P   +Y+ LI G+   G  + ++K  +
Sbjct: 350 IYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWE 409

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M+   N  P+   Y  L++ +   K    A      M   GM PD +  N I + Y + 
Sbjct: 410 EMT-SNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIMQKLGMWPDTIACNHILSIYCRK 468

Query: 262 GEADQAEEVIVEMEHNGVQPN--------GRTC--------------------------- 286
            + ++A  +  + + NGV  N         R C                           
Sbjct: 469 PDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNY 528

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             +IS + K    ++A+     M + G+  N+  + +LI  F+     D    +   MKE
Sbjct: 529 STLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFKGMKE 588

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
            RV PD I Y++++  +   G M + + +FD+M + G  P+   Y+     Y++  +  +
Sbjct: 589 SRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQ 648

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG-VSPNLKTFETLM 465
           A +L   M E G +P+ +++T +I+ +C+ G M+RA  +FD+M + G  +PN+  +  L+
Sbjct: 649 AHKLYEKMKERGVYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLI 708

Query: 466 WGYSEARQPWRAEEILQIMKAFGV 489
             Y +  +  +AE++ + M+A G+
Sbjct: 709 NSYIKLNKRDQAEKLYEEMRAKGL 732



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 120/480 (25%), Positives = 216/480 (45%), Gaps = 47/480 (9%)

Query: 80  NSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           NS++E      A  +F    + G + ++++   LL  L    R + +  +   + + G  
Sbjct: 149 NSMLE-----HANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIKFGPR 203

Query: 140 PDSIFFNAVINAFSE----SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           P+   +  ++N F      S ++  A +   K+  SG TP   TY T IKG    G    
Sbjct: 204 PNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGV 263

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +L+  + R+ N   N   +N ++   C    + EA  V  +M  SG+ PDV +Y+ + 
Sbjct: 264 AWRLIQNLCRK-NQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILI 322

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + + G  DQA EV  EM ++G+ PN  +  I+I G+CKEG++ +AL     MK  G+ 
Sbjct: 323 DGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGIL 382

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA-WSTAGFMDKCKE 374
           P++  +++LI GF    D D   +    M     +P    Y +++   + +  F +  KE
Sbjct: 383 PDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKE 442

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQE------------------------------- 403
            F  M K G+ PD  A + +   Y R+ +                               
Sbjct: 443 -FRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRIC 501

Query: 404 ----PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
               PEKA +LL  M++    P+VV ++T+IS +    + ++A+ +F KM + G++ N+K
Sbjct: 502 RGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVK 561

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+  L+  +    +   A  + + MK   V+P +  +  L      TG    A+ +  ++
Sbjct: 562 TYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEM 621



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 91/419 (21%), Positives = 194/419 (46%), Gaps = 35/419 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + L++    +G+  +A  +F  +   G  P++ +Y+ L+     + R +    +  
Sbjct: 315 VYSYSILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFE 374

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++ +G+ PD   ++ +I+ F   G+M+ A+  + +M  +  +P+   Y +LIKGY  + 
Sbjct: 375 EMKNSGILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSK 434

Query: 192 KPEESVKLLDLMSR----------------------------------EGNVKPNLRTYN 217
           +   ++K   +M +                                  E  V  N  +YN
Sbjct: 435 QFANALKEFRIMQKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYN 494

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
             +   C      +A  ++  M    + PDVV Y+T+ + +A+   +++A  + ++M   
Sbjct: 495 EFIHRICRGSVPEKALQLLPVMLKRNVLPDVVNYSTLISCFAKRLNSEKAVMLFIKMTKV 554

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G+  N +T  I+I+ +  + K+  A R  + MKE  V+P+ + +  L+ GF    +    
Sbjct: 555 GITFNVKTYTILINLFISDCKMDVAYRLFKGMKESRVYPDQIAYTSLVAGFCNTGEMTRA 614

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
             +   M     +P+V+TY+  +N +      ++  ++++ M + G+ PD   Y++L   
Sbjct: 615 RALFDEMSREGCSPNVVTYTCFINEYLKLNKNNQAHKLYEKMKERGVYPDQILYTMLIAA 674

Query: 398 YVREQEPEKAEELLMTMIESG-FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
           +    E  +AE L   M + G   PNVV++T +I+ +      D+A +++++M   G+S
Sbjct: 675 FCNTGEMNRAEALFDEMKQEGRCTPNVVMYTCLINSYIKLNKRDQAEKLYEEMRAKGLS 733



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 103/437 (23%), Positives = 195/437 (44%), Gaps = 53/437 (12%)

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDP------------DSIFFNAVINAFS 153
           S++ +T  LA ++ +  F  I  I++  +E   D              ++ F+ +I  F+
Sbjct: 89  SIIIHTYALAGMSWEV-FILIRDIVTFYKEENRDAGELVSLLLDVEKSNVVFDMLIKVFA 147

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
            +  +E A   F + K+ G+     + N L+K   +     + V+LL  +  +   +PN+
Sbjct: 148 SNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCL-VEDNRVDGVRLLFEVLIKFGPRPNI 206

Query: 214 RTYNVLVRAWCN----EKNITEAWNVMHKMAASGMKPDVVTY------------------ 251
            TY +++  +C       +I  A  ++ K+  SG  P+VVTY                  
Sbjct: 207 HTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVGLFGVAWR 266

Query: 252 -----------------NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
                            N +     Q G  D+A EV  EM+++G+ P+  +  I+I G+C
Sbjct: 267 LIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYSILIDGFC 326

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           ++G++ +A    + M+  G+ PN+  +++LI GF +    D   EV   MK   + PDV 
Sbjct: 327 RKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNSGILPDVY 386

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           +YS +++ +   G MD   + +++M      P A  Y  L KGY + ++   A +    M
Sbjct: 387 SYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANALKEFRIM 446

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
            + G  P+ +    I+S +C     ++A+ + +K  E+GV  N  ++   +        P
Sbjct: 447 QKLGMWPDTIACNHILSIYCRKPDFNKALALSEKFQENGVHFNPYSYNEFIHRICRGSVP 506

Query: 475 WRAEEILQIMKAFGVHP 491
            +A ++L +M    V P
Sbjct: 507 EKALQLLPVMLKRNVLP 523



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/374 (22%), Positives = 169/374 (45%), Gaps = 54/374 (14%)

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLL---------------DLMSREGNVKPNLRTY 216
           G   + ++++ +I  Y +AG   E   L+               +L+S   +V+ +   +
Sbjct: 80  GFENSINSFSIIIHTYALAGMSWEVFILIRDIVTFYKEENRDAGELVSLLLDVEKSNVVF 139

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           ++L++ + +   +  A  V  +    G++ ++++ N +     ++   D    +   +  
Sbjct: 140 DMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEVLIK 199

Query: 277 NGVQPNGRTCGIIISGYCK----EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI- 331
            G +PN  T  I+++ +C+       I+ A      +   G  PN+V +   IKG  ++ 
Sbjct: 200 FGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLCKVG 259

Query: 332 -----------MDR-----------------------DGVDEVLALMKEFRVNPDVITYS 357
                      + R                       D   EV   MK   + PDV +YS
Sbjct: 260 LFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVYSYS 319

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++ +   G +D+  E+F +M  +GI P+ ++YSIL  G+ +E   +KA E+   M  S
Sbjct: 320 ILIDGFCRKGRVDQASEVFKEMRNSGILPNIYSYSILIDGFCKEGRVDKALEVFEEMKNS 379

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  P+V  ++ +I G+C  G MD AI+ +++M  +  SP+   + +L+ GY +++Q   A
Sbjct: 380 GILPDVYSYSILIDGFCRKGDMDSAIKFWEEMTSNNFSPSAFNYCSLIKGYYKSKQFANA 439

Query: 478 EEILQIMKAFGVHP 491
            +  +IM+  G+ P
Sbjct: 440 LKEFRIMQKLGMWP 453



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 104/224 (46%), Gaps = 2/224 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++   +R   ++A  +F  + + G   ++ TYT L+       + +  + +  
Sbjct: 525 VVNYSTLISCFAKRLNSEKAVMLFIKMTKVGITFNVKTYTILINLFISDCKMDVAYRLFK 584

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++E+ + PD I + +++  F  +G M  A   F +M   G +P   TY   I  Y    
Sbjct: 585 GMKESRVYPDQIAYTSLVAGFCNTGEMTRARALFDEMSREGCSPNVVTYTCFINEYLKLN 644

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-MKPDVVT 250
           K  ++ KL + M   G V P+   Y +L+ A+CN   +  A  +  +M   G   P+VV 
Sbjct: 645 KNNQAHKLYEKMKERG-VYPDQILYTMLIAAFCNTGEMNRAEALFDEMKQEGRCTPNVVM 703

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           Y  +  +Y +  + DQAE++  EM   G+     + G +   +C
Sbjct: 704 YTCLINSYIKLNKRDQAEKLYEEMRAKGLSRLCSSEGSVSESWC 747



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 93/207 (44%), Gaps = 4/207 (1%)

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           V+F++LIK F      +  + V    K+  +  ++++ + ++        +D  + +F+ 
Sbjct: 137 VVFDMLIKVFASNSMLEHANYVFVRAKDDGIELNIMSCNFLLKCLVEDNRVDGVRLLFEV 196

Query: 379 MGKAGIKPDAHAYSILAKGYVR----EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + K G +P+ H Y+I+   + R      +  +A E+L  +  SG  PNVV + T I G C
Sbjct: 197 LIKFGPRPNIHTYTIMMNFFCRGVGCSVDIRRASEILGKIYMSGETPNVVTYGTYIKGLC 256

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G    A  +   +C      N   F  +++G  +      A E+ + MK  G+ P   
Sbjct: 257 KVGLFGVAWRLIQNLCRKNQPLNNHCFNAVIYGLCQGGILDEASEVFKEMKNSGILPDVY 316

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKN 521
           ++ +L +     G   +A  +  +++N
Sbjct: 317 SYSILIDGFCRKGRVDQASEVFKEMRN 343


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 216/464 (46%), Gaps = 47/464 (10%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P   TY+ L+       R     ++   + + G   + I FN ++    ++  ++EA + 
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252

Query: 165 F-WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK--PNLRTYNVLVR 221
             W+M E G TP   +YNTL+KG+    + EE+++LL +M+ +  +   P++ +YN ++ 
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVIN 312

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
            +  E  + +A+N+  +M   G+ PDVVTYNT+     +    D+A+ V  +M   GV+P
Sbjct: 313 GFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKP 372

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI------------KGFV 329
           +  T   +I GY   GK KE +R    M  + + P+  I+ LL+            +   
Sbjct: 373 SNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIF 432

Query: 330 EIMDRDGV------DEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMD---------- 370
           + + R G+      DE + +  + R   ++P+V+ Y  +++A    G +D          
Sbjct: 433 DSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMI 492

Query: 371 -------------KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
                        K +E+  +M   GI+ D   ++ L     RE    +A+ L+  M+  
Sbjct: 493 NEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRV 552

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  P+V+ + T++ G C  G  D A ++ D M   G+ PN  T+ TL+ GY +AR+   A
Sbjct: 553 GVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDA 612

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             +L+ M   G  P   T+  +      TG   EAK +   + N
Sbjct: 613 YSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMIN 656



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 204/441 (46%), Gaps = 45/441 (10%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P +V+Y T++     + + +  +++  Q+ + G+ PD + +N VI+   ++  ++ A   
Sbjct: 302 PDVVSYNTVINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAV 361

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F +M + G+ P+  TYN LI GY   GK +E V+LL+ MS   +++P+   Y +L+   C
Sbjct: 362 FQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTH-DLEPDCFIYALLLDYLC 420

Query: 225 NEKNITEAWNVMH---------------------KMAASGMKPDVVTYNTIATAYAQNGE 263
                TEA N+                       KM   G+ P+VV Y  +  A  + G 
Sbjct: 421 KNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGR 480

Query: 264 AD-----------------------QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
            D                       +AEE++ EM   G++ +      ++   C+EG++ 
Sbjct: 481 VDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVM 540

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           EA R    M   GV P+++ +N L+ G       D   ++L +M    + P+  TY+T++
Sbjct: 541 EAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLL 600

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           + +  A  +D    +  +M   G  PD   Y+ +  G  +     +A+EL + MI S   
Sbjct: 601 HGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQ 660

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
            ++  +  I++G C +  +D A ++F  +C  G+  ++ TF  ++    +  +   A ++
Sbjct: 661 WDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDL 720

Query: 481 LQIMKAFGVHPQKSTFLLLAE 501
              + A+G+ P   T+ L+AE
Sbjct: 721 FATISAYGLVPDVETYCLIAE 741



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 120/467 (25%), Positives = 208/467 (44%), Gaps = 54/467 (11%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL + L+   +P    A FN+L+    + S   ++TL + L I     S+   M +   +
Sbjct: 137 KLFDLLLPHARPASVTA-FNHLLTAVSRAS-GRHSTLESQLGI-----SLFDRMVRECSD 189

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            + PD   ++ +I  F   G +E     F  + ++G       +N L+KG   A + +E+
Sbjct: 190 KVAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEA 249

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS---GMKPDVVTYNT 253
             +L     E    PN+ +YN LV+ +CNE    EA  ++H MA        PDVV+YNT
Sbjct: 250 TNILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNT 309

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + + G+ D+A  + ++M   G+ P+  T   +I G CK   +  A    + M + G
Sbjct: 310 VINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKG 369

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V P+   +N LI G++       V  +L  M    + PD   Y+ +++     G   + +
Sbjct: 370 VKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEAR 429

Query: 374 EIFDDMGKAGIKPDA---HAYSILAK---------------------------------- 396
            IFD + + GIKPDA    A  I  K                                  
Sbjct: 430 NIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFN 489

Query: 397 -------GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
                  G    ++ EKAEEL+  M++ G   +VV+F T++   C +G +  A  + + M
Sbjct: 490 QMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELM 549

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
              GV P++ ++ TL+ G+    +   A ++L +M + G+ P + T+
Sbjct: 550 LRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTY 596



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 187/384 (48%), Gaps = 29/384 (7%)

Query: 78  LMNSLIERG-KPQ----EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR-------FNS 125
           + +S+I +G KP     EA  IF+ + + G  P++V Y  L+ AL    R       FN 
Sbjct: 431 IFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQ 490

Query: 126 I----------------HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK 169
           +                  ++ ++ + G+  D + FN ++      G + EA      M 
Sbjct: 491 MINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELML 550

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
             G+ P   +YNTL+ G+ + G+ +E+ KLLD+M   G +KPN  TYN L+  +C  + I
Sbjct: 551 RVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIG-LKPNEFTYNTLLHGYCKARRI 609

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
            +A++++ +M  +G  PDVVTYNTI     Q G   +A+E+ + M ++  Q +  T  II
Sbjct: 610 DDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNII 669

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           ++G CK   + EA +  +++   G+  +++ FN++I   ++   ++   ++ A +  + +
Sbjct: 670 LNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGL 729

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            PDV TY  I       G +++   +F  M + G  P++   + L + ++   +  +A  
Sbjct: 730 VPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGA 789

Query: 410 LLMTMIESGFHPNVVIFTTIISGW 433
            L  + E  F       + +IS +
Sbjct: 790 YLSKLDEKNFSLEASTASMLISLY 813



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 98/459 (21%), Positives = 199/459 (43%), Gaps = 45/459 (9%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
            A+A+F  +++ G KPS  TY  L+       ++  +  ++ ++  + ++PD   +  ++
Sbjct: 357 RAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLL 416

Query: 150 NAFSESGN---------------------MEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +   ++G                      ++EA+  F KM++ GL+P    Y  LI    
Sbjct: 417 DYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALC 476

Query: 189 IAGKPEESVKLLDLMSRE----------------------GNVKPNLRTYNVLVRAWCNE 226
             G+ ++++   + M  E                        ++ ++  +N L+   C E
Sbjct: 477 KLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCRE 536

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
             + EA  ++  M   G++PDV++YNT+   +   G  D+A +++  M   G++PN  T 
Sbjct: 537 GRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTY 596

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             ++ GYCK  +I +A    R M   G  P++V +N ++ G  +        E+   M  
Sbjct: 597 NTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMIN 656

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
            R   D+ TY+ I+N       +D+  ++F  +   G++     ++I+    ++  + E 
Sbjct: 657 SRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKED 716

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A +L  T+   G  P+V  +  I      +GS++    +F  M E+G +PN +    L+ 
Sbjct: 717 AMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVR 776

Query: 467 GYSEARQPWRAEEILQIM--KAFGVHPQKSTFLLLAEAR 503
            +       RA   L  +  K F +    ++ L+   +R
Sbjct: 777 RFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSR 815



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/249 (27%), Positives = 119/249 (47%), Gaps = 6/249 (2%)

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           V P+  T  I+I  +C+ G+++        + + G   N ++FN L+KG  +    D   
Sbjct: 191 VAPDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEAT 250

Query: 339 EVLA-LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF----DDMGKAGIKPDAHAYSI 393
            +L   M EF   P+V++Y+T++  +      ++  E+     DD G +   PD  +Y+ 
Sbjct: 251 NILLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLS-CPPDVVSYNT 309

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           +  G+ RE + +KA  L + MI+ G  P+VV + T+I G C    +DRA  VF +M + G
Sbjct: 310 VINGFFREGQVDKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKG 369

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           V P+  T+  L+ GY    +      +L+ M    + P    + LL +     G   EA+
Sbjct: 370 VKPSNGTYNCLIHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEAR 429

Query: 514 RILSKIKNK 522
            I   +  K
Sbjct: 430 NIFDSVIRK 438



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/298 (22%), Positives = 141/298 (47%), Gaps = 1/298 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LM  L   G+  EAQ +   ++  G +P +++Y TL+    +  R +    ++  +   G
Sbjct: 529 LMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIG 588

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +N +++ + ++  +++A     +M  +G TP   TYNT++ G    G+  E+ 
Sbjct: 589 LKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEA- 647

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K L L       + ++ TYN+++   C    + EA+ +   + + G++  ++T+N +  A
Sbjct: 648 KELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGA 707

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+ + A ++   +   G+ P+  T  +I     KEG ++E       M+E G  PN
Sbjct: 708 LLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAPN 767

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
             + N L++ F+   D       L+ + E   + +  T S +++ +S   +    K +
Sbjct: 768 SRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLISLYSRGEYQQLAKSL 825



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/324 (22%), Positives = 147/324 (45%), Gaps = 1/324 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K ++A+ +   +++ G +  +V + TL+  L  + R      ++  +   G+ PD I +N
Sbjct: 503 KWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYN 562

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +++    +G  +EA      M   GL P   TYNTL+ GY  A + +++  LL  M   
Sbjct: 563 TLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMN 622

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G   P++ TYN ++         +EA  +   M  S  + D+ TYN I     +N   D+
Sbjct: 623 GPT-PDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDE 681

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A ++   +   G+Q +  T  I+I    K GK ++A+    T+  YG+ P++  + L+ +
Sbjct: 682 AFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAE 741

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
             ++    + +  + + M+E    P+    + ++  +   G + +       + +     
Sbjct: 742 NLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSL 801

Query: 387 DAHAYSILAKGYVREQEPEKAEEL 410
           +A   S+L   Y R +  + A+ L
Sbjct: 802 EASTASMLISLYSRGEYQQLAKSL 825



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 58/240 (24%), Positives = 112/240 (46%), Gaps = 1/240 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L++     G+  EA  + + ++  G KP+  TY TLL      +R +  +S++ 
Sbjct: 558 VISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLR 617

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  NG  PD + +N +++   ++G   EA + +  M  S       TYN ++ G     
Sbjct: 618 EMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNN 677

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+ K+   +  +G ++ ++ T+N+++ A        +A ++   ++A G+ PDV TY
Sbjct: 678 CVDEAFKMFQSLCSKG-LQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETY 736

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             IA    + G  ++   +   ME NG  PN R    ++  +   G I  A  +   + E
Sbjct: 737 CLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDE 796


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 221/494 (44%), Gaps = 57/494 (11%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+++   L+  L++ G+ +    I+  +I  G  PS++T+ TL+     Q        + 
Sbjct: 146 TIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMF 205

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+ P  I +  +I        +EEA      M+E G+ P   TYNTL+ GY   
Sbjct: 206 DEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKL 265

Query: 191 GKPEESVKLLDLMSREG----------------------------------NVKPNLRTY 216
              +++++L   M  EG                                  +V PN+  Y
Sbjct: 266 ANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVY 325

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N L+ A+C   +++EA  +  ++    + PDV TY+ +          ++A  +  +M  
Sbjct: 326 NSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTK 385

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G+  N  T   +I G CKEGK+ +AL     M E GV PN++ F+ LI G+ +I +   
Sbjct: 386 EGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQA 445

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              + + M    ++PDV+TY+ +++     G M +  +++ DM   GI P+ +  S L  
Sbjct: 446 AMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYTISCLLD 505

Query: 397 GYVREQEPEKAEELLMTMIE----------SGFHP---NVVIFTTIISGWCSDGSMDRAI 443
           G  ++ +   A EL    IE           G  P   N V +T +I G C DG   +A+
Sbjct: 506 GLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAV 565

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA----FGVHPQKSTFLLL 499
           ++F  M  +G+ P+   +  ++ G       ++ + IL ++ A    FGV P  +  ++L
Sbjct: 566 KLFSDMRRYGLQPDEVIYVVMLRGL------FQVKYILMMLHADMLKFGVIPNSAVHVIL 619

Query: 500 AEARRATGLTKEAK 513
            E  + +G  K A+
Sbjct: 620 CECYQESGFLKSAQ 633



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 210/453 (46%), Gaps = 23/453 (5%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEG---GHKPSLVTYTTLLAALTIQKRFNSI 126
           + ++  + +++ L+       A+ + N+L++     HKP    Y     A          
Sbjct: 56  KNIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHKP----YHACQLAF--------- 102

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
            S +S+++ +   P+   +  +I    +   +EEA+  + K+   G   T    N L+  
Sbjct: 103 -SELSRLKSSKFTPN--VYGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYV 156

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
               G+ E   ++ + M   G + P++ T+  L+   C + ++  A  +  +M   G+ P
Sbjct: 157 LVKTGRFELLWRIYEEMISNG-LSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVP 215

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
            V+ Y  +      + + ++AE +   M   GV PN  T   ++ GYCK    K+ALR  
Sbjct: 216 TVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLY 275

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
           + M   G+ P++V F +LI G  +  +      +   M +F V P++  Y+++++A+   
Sbjct: 276 QDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKV 335

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G + +   +F ++ +  + PD   YSIL +G       E+A  +   M + G   N V +
Sbjct: 336 GDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTY 395

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            ++I G C +G MD+A+E+  +M E+GV PN+ TF TL+ GY + R    A  I   M  
Sbjct: 396 NSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVI 455

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             + P   T+  + +     G  KEA ++ S +
Sbjct: 456 KSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDM 488



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/350 (22%), Positives = 161/350 (46%), Gaps = 51/350 (14%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + G+ + A+ +F N+I+    P++  Y +L+ A       +   ++  ++E   
Sbjct: 293 LIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFE 352

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   ++ +I         EEA + F KM + G+   + TYN+LI G    GK ++++
Sbjct: 353 VSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKAL 412

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++   M+  G V+PN+ T++ L+  +C  +N+  A  +  +M    + PDVVTY  +   
Sbjct: 413 EICSQMTENG-VEPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDG 471

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL-------------- 303
           + + G   +A ++  +M  NG+ PN  T   ++ G CK+GKI +AL              
Sbjct: 472 HCKYGSMKEALKLYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRC 531

Query: 304 ----------------------------RFART------MKEYGVHPNLVIFNLLIKGFV 329
                                       +F++       M+ YG+ P+ VI+ ++++G  
Sbjct: 532 NVDAGGSKPSLTNHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLF 591

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           ++  +  +  + A M +F V P+   +  +   +  +GF+   +    D+
Sbjct: 592 QV--KYILMMLHADMLKFGVIPNSAVHVILCECYQESGFLKSAQNCSKDL 639



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/314 (22%), Positives = 145/314 (46%), Gaps = 20/314 (6%)

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           N++ Y+ ++      K ++ A  +++ +  + +K     Y+    A+++          +
Sbjct: 57  NIQLYSAIIHVLVGSKLLSHARYLLNDLVQNLVKSHK-PYHACQLAFSE----------L 105

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR-FARTMKEYGVHPNLVIFNLLIK-GFV 329
             ++ +   PN    G +I   CK   ++EAL  + +      +    V+  +L+K G  
Sbjct: 106 SRLKSSKFTPN--VYGELIIVLCKMELVEEALSMYHKVGAALTIQACNVLLYVLVKTGRF 163

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           E++ R     +   M    ++P VIT+ T+++     G + + +E+FD+M   GI P   
Sbjct: 164 ELLWR-----IYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVI 218

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+IL +G   + + E+AE +   M E G +PNV  + T++ G+C   +  +A+ ++  M
Sbjct: 219 VYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDM 278

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G+ P++ TF  L+ G  +  +   A  +   M  F V P  + +  L +A    G  
Sbjct: 279 LGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDV 338

Query: 510 KEAKRILSKIKNKE 523
            EA  +  +++  E
Sbjct: 339 SEAMALFLELERFE 352


>gi|125551633|gb|EAY97342.1| hypothetical protein OsI_19265 [Oryza sativa Indica Group]
          Length = 793

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/434 (27%), Positives = 211/434 (48%), Gaps = 1/434 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   +A A F +L   GH P +VTY  LL        +     ++ ++E++G  PD++ +
Sbjct: 265 GLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTY 324

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +   ++ +G  EEA      M   GL P T TYNT++  Y   G+ +E++ L D M +
Sbjct: 325 NELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKK 384

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G V PN+ TYN++      +   T    ++ +M+ SG  P+ VT+NT+     + G  D
Sbjct: 385 NGYV-PNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMED 443

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
               V+  M+  GV+ +  T   +IS Y + G    A +    M   G  P L  +N L+
Sbjct: 444 YVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALL 503

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                  D      +++ M +    P+  +YS ++  ++  G     + I  ++    I 
Sbjct: 504 NVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIF 563

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P       L     + +  E  E+    +   G+ P++VIF ++++ +  +G   +A E+
Sbjct: 564 PSWVILRTLVIANFKCRRLEGVEKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEM 623

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           FD + + G+SP+L T+ +LM  Y+++ + W AE+IL+ +K+  V P   ++  +      
Sbjct: 624 FDSIKQSGLSPDLITYNSLMDMYAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCK 683

Query: 506 TGLTKEAKRILSKI 519
            GL KEA+RILS++
Sbjct: 684 QGLIKEAQRILSEM 697



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/487 (22%), Positives = 221/487 (45%), Gaps = 34/487 (6%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+    + G   EA  +   + + G +P  VTY  L         F      + 
Sbjct: 286 VVTYNALLQVFGKAGNYTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLD 345

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ P++  +N V+ A++  G ++EA+  F +MK++G  P  +TYN +    G   
Sbjct: 346 TMTSKGLLPNTFTYNTVMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKS 405

Query: 192 KPEESVKLLDLMSREG----------------------------------NVKPNLRTYN 217
           +    +++L+ MSR G                                   V+ +  TYN
Sbjct: 406 RFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYN 465

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            L+ A+    + T A+ +  +M +SG  P + TYN +    ++ G+   A+ ++ +M  N
Sbjct: 466 TLISAYGRCGSRTYAFKMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKN 525

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G +PN ++  +++  Y K G         + +    + P+ VI   L+    +    +GV
Sbjct: 526 GFKPNDQSYSLLLQCYAKGGNAAGIESIEKEVYVGTIFPSWVILRTLVIANFKCRRLEGV 585

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           ++    +K     PD++ +++++  ++  G   K  E+FD + ++G+ PD   Y+ L   
Sbjct: 586 EKAFQEVKAQGYKPDLVIFNSMLAMYAKNGLYSKATEMFDSIKQSGLSPDLITYNSLMDM 645

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           Y +  E  +AE++L  +  S   P+VV + T+I+G+C  G +  A  +  +M   G++P 
Sbjct: 646 YAKSNESWEAEKILKQLKSSQVKPDVVSYNTVINGFCKQGLIKEAQRILSEMIADGMAPC 705

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + T+ TL+ GY+       A E++  M    + P + T+  + ++        EA+  LS
Sbjct: 706 VVTYHTLVGGYASLEMFNEAREVVNYMIHHNLKPMELTYRRVVDSYCKAKRYDEAREFLS 765

Query: 518 KIKNKER 524
           +I + ++
Sbjct: 766 EISDTDQ 772



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 90/363 (24%), Positives = 161/363 (44%), Gaps = 37/363 (10%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP----------- 193
           +  V++A S +G  E A+  F +++  G+ PT  TYN ++  YG  G+            
Sbjct: 183 YTTVLHALSRAGRYERALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEM 242

Query: 194 -------------------------EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
                                    +++V   + +   G+V P + TYN L++ +    N
Sbjct: 243 RAAGVEPDDFTASTVIAACGRDGLLDQAVAFFEDLKARGHV-PCVVTYNALLQVFGKAGN 301

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
            TEA  V+ +M  SG +PD VTYN +A  YA+ G  ++A + +  M   G+ PN  T   
Sbjct: 302 YTEALRVLKEMEDSGCQPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNT 361

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +++ Y   G++ EAL     MK+ G  PN+  +NL+     +      + E+L  M    
Sbjct: 362 VMTAYANVGRVDEALALFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSG 421

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             P+ +T++T++      G  D    + + M   G++     Y+ L   Y R      A 
Sbjct: 422 CTPNRVTWNTMLAVCGKRGMEDYVTRVLNGMKSCGVELSRDTYNTLISAYGRCGSRTYAF 481

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           ++   MI SGF P +  +  +++     G    A  +  KM ++G  PN +++  L+  Y
Sbjct: 482 KMYDEMISSGFTPCLTTYNALLNVLSRQGDWSTAQSIVSKMLKNGFKPNDQSYSLLLQCY 541

Query: 469 SEA 471
           ++ 
Sbjct: 542 AKG 544



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/393 (22%), Positives = 173/393 (44%), Gaps = 8/393 (2%)

Query: 112 TLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF-WKMKE 170
           +L+AA++ Q    S+ + +S   +  +  D     +++ A   SG+ E A+    W   E
Sbjct: 84  SLVAAISSQP-LPSLPAFLSSRRDELLRSD---LPSLLKALELSGHWEWALALLRWASDE 139

Query: 171 SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
                  +    +++  G  G+ +    LLD M      + ++R Y  ++ A        
Sbjct: 140 GA--ADAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYE 197

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA-DQAEEVIVEMEHNGVQPNGRTCGII 289
            A  +  ++   G+ P +VTYN +   Y + G +  +   ++ EM   GV+P+  T   +
Sbjct: 198 RALQLFAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTV 257

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           I+   ++G + +A+ F   +K  G  P +V +N L++ F +  +      VL  M++   
Sbjct: 258 IAACGRDGLLDQAVAFFEDLKARGHVPCVVTYNALLQVFGKAGNYTEALRVLKEMEDSGC 317

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            PD +TY+ +   ++ AGF ++  +  D M   G+ P+   Y+ +   Y      ++A  
Sbjct: 318 QPDAVTYNELAGTYARAGFFEEAAKCLDTMTSKGLLPNTFTYNTVMTAYANVGRVDEALA 377

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L   M ++G+ PNV  +  I             +E+ ++M   G +PN  T+ T++    
Sbjct: 378 LFDRMKKNGYVPNVNTYNLIFGMLGKKSRFTAMLEMLEEMSRSGCTPNRVTWNTMLAVCG 437

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           +         +L  MK+ GV   + T+  L  A
Sbjct: 438 KRGMEDYVTRVLNGMKSCGVELSRDTYNTLISA 470



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 64/138 (46%), Gaps = 2/138 (1%)

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTM-IESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           DA A  ++ +   RE + +   +LL  M +  G   +V  +TT++      G  +RA+++
Sbjct: 143 DAAALEMVVRALGREGQHDVVCDLLDEMPLPPGSRLDVRAYTTVLHALSRAGRYERALQL 202

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPW-RAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           F ++   GV P + T+  ++  Y    + W R   +L+ M+A GV P   T   +  A  
Sbjct: 203 FAELRRQGVVPTIVTYNVVLDVYGRMGRSWPRIVALLEEMRAAGVEPDDFTASTVIAACG 262

Query: 505 ATGLTKEAKRILSKIKNK 522
             GL  +A      +K +
Sbjct: 263 RDGLLDQAVAFFEDLKAR 280


>gi|218191848|gb|EEC74275.1| hypothetical protein OsI_09511 [Oryza sativa Indica Group]
          Length = 933

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 213/442 (48%), Gaps = 1/442 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L + GK +EA A+F +    G     V YTTL+  L       +      ++ +  
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M PD++ +N  IN     G  +EA     +M+  GL P  STYNT+I  +   G+  +++
Sbjct: 550 MLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL  M +  ++KPNL TYN LV        + +A  ++++M ++G  P  +T+  +  A
Sbjct: 610 KLLHEM-KMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQA 668

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            +Q+   D   ++   M + G+  +      ++   C  G  ++A      M   G+ P+
Sbjct: 669 CSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPD 728

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + FN LI G  +    D      A M    ++P++ T++T++    + G + +   +  
Sbjct: 729 TITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLI 788

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K+G++P+   Y IL  G+ ++    +A  L   M+  GF P V  +  +IS +   G
Sbjct: 789 EMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAG 848

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M +A E+F  M + GV P   T++ L+ G+S  R     ++ L+ MK  G  P K T  
Sbjct: 849 MMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGTLS 908

Query: 498 LLAEARRATGLTKEAKRILSKI 519
            +  A    G+T +A+R+L  +
Sbjct: 909 FICRAFSKPGMTWQAQRLLKNL 930



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 208/482 (43%), Gaps = 36/482 (7%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T LM+ L ++GK  E +      +      + VTYT L+ AL      +    ++ ++EE
Sbjct: 348 TALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEE 407

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY-------- 187
             + P+ + F++VIN F + G +++A +    MKE G+ P   TY TLI G+        
Sbjct: 408 KSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDA 467

Query: 188 -----------GIA----------------GKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
                      G+                 GK EE++ L    S  G +  +   Y  L+
Sbjct: 468 ALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSG-LSLDHVNYTTLI 526

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
                  ++  A+    ++    M PD V YN         G+  +A+ ++ EM + G++
Sbjct: 527 DGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLK 586

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+  T   +I  +C++G+  +AL+    MK   + PNL+ +N L+ G       +    +
Sbjct: 587 PDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYL 646

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L  M     +P  +T+  ++ A S +  +D   +I + M  AG+  D   Y+ L +    
Sbjct: 647 LNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCY 706

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
                KA  +L  M+ SG  P+ + F  +I G C    +D A   + +M    +SPN+ T
Sbjct: 707 HGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIAT 766

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           F TL+ G     +   A  +L  M+  G+ P   T+ +L           EA R+  ++ 
Sbjct: 767 FNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMV 826

Query: 521 NK 522
            K
Sbjct: 827 GK 828



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 197/442 (44%), Gaps = 1/442 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+      G+   A+ + + + E G  P++ TYT  +      K       +   +  NG
Sbjct: 210 LVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNG 269

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D +  +A++      G   EA   F +M + G  P   TY TLI     AG+ +E +
Sbjct: 270 VLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELL 329

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M   G V  +L TY  L+     +    E  + +    +  +  + VTY  +  A
Sbjct: 330 SLLGEMVSRGVVM-DLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDA 388

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+AE+V++EME   + PN  T   +I+G+ K G + +A  + R MKE G++PN
Sbjct: 389 LCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPN 448

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +  LI GF +   +D   EV   M    V  +     +++N     G +++   +F 
Sbjct: 449 VVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFK 508

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           D   +G+  D   Y+ L  G  +  +   A +    +++    P+ V++   I+  C  G
Sbjct: 509 DASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILG 568

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
               A  +  +M   G+ P+  T+ T++  +    +  +A ++L  MK   + P   T+ 
Sbjct: 569 KFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYN 628

Query: 498 LLAEARRATGLTKEAKRILSKI 519
            L      TG  ++AK +L+++
Sbjct: 629 TLVAGLFGTGAVEKAKYLLNEM 650



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 215/472 (45%), Gaps = 4/472 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + ++N  ++RG   +A      + E G  P++VTY TL+      +  ++   +  
Sbjct: 414 VVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYH 473

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G++ +    ++++N   ++G +EEAM  F     SGL+     Y TLI G   AG
Sbjct: 474 DMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAG 533

Query: 192 KPEESVKL-LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
               + K   +LM R  N+ P+   YNV +   C      EA +++ +M   G+KPD  T
Sbjct: 534 DMPTAFKFGQELMDR--NMLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQST 591

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+  ++ + GE  +A +++ EM+ + ++PN  T   +++G    G +++A      M 
Sbjct: 592 YNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMV 651

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  P+ +    +++   +    D + ++   M    ++ D+  Y+T++      G   
Sbjct: 652 SAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTR 711

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   + ++M  +GI PD   ++ L  G+ +    + A      M+     PN+  F T++
Sbjct: 712 KATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLL 771

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G  S G +  A  V  +M + G+ PN  T++ L+ G+ +      A  +   M   G  
Sbjct: 772 GGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYCEMVGKGFV 831

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
           P+ ST+  L       G+  +AK +   ++ K   +      DI V    R+
Sbjct: 832 PKVSTYNALISDFTKAGMMTQAKELFKDMQ-KRGVHPTSCTYDILVSGWSRI 882



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 213/448 (47%), Gaps = 1/448 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +++ L+  L   G+  EA A+F  + + G  P+ VTY TL+ +L    R   + S++ 
Sbjct: 274 VVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNHVTYCTLIDSLAKAGRGKELLSLLG 333

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+  D + + A+++   + G  +E  DT        L+    TY  LI     A 
Sbjct: 334 EMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSLNGVTYTVLIDALCKAH 393

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+ ++L L   E ++ PN+ T++ ++  +     + +A      M   G+ P+VVTY
Sbjct: 394 NVDEAEQVL-LEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTY 452

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   + +    D A EV  +M   GV+ N      +++G  + GKI+EA+   +    
Sbjct: 453 GTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDSLVNGLRQNGKIEEAMALFKDASG 512

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  + V +  LI G  +  D     +    + +  + PD + Y+  +N     G   +
Sbjct: 513 SGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCILGKFKE 572

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            K I  +M   G+KPD   Y+ +   + R+ E  KA +LL  M  S   PN++ + T+++
Sbjct: 573 AKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVA 632

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G    G++++A  + ++M   G SP+  T   ++   S++R+     +I + M   G+H 
Sbjct: 633 GLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHA 692

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
             + +  L +     G+T++A  +L ++
Sbjct: 693 DITVYNTLLQVLCYHGMTRKATVVLEEM 720



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 143/612 (23%), Positives = 253/612 (41%), Gaps = 72/612 (11%)

Query: 58  THCSFCMNKES---CRTVRSMTKLMNSLIER-GKPQEAQAIFNNLIEGGHKPSLVTYTTL 113
           +HC   + + +    R+ R  T   N L+        A A+   + + G     VT  TL
Sbjct: 82  SHCRLRLLRPAIALLRSSRPTTVAYNILLAALSDHAHAPAVLAEMCKRGVPFDGVTVNTL 141

Query: 114 LAAL----------TIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           LA L           +  R   IH++           D I +N +I  +   G+   A+ 
Sbjct: 142 LAGLCRNGQVDAAAALADRGGGIHAL-----------DVIGWNTLIAGYCRVGDTPAALS 190

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              +M   GL      YNTL+ G+  AG+ + +  +LD+M +E  V PN+ TY   +  +
Sbjct: 191 VADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMM-KEAGVDPNVATYTPFIVYY 249

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C  K + EA+++   M  +G+  DVVT + +     ++G   +A  +  EM+  G  PN 
Sbjct: 250 CRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAVPNH 309

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL------------------------- 318
            T   +I    K G+ KE L     M   GV  +L                         
Sbjct: 310 VTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF 369

Query: 319 ----------VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
                     V + +LI    +  + D  ++VL  M+E  ++P+V+T+S+++N +   G 
Sbjct: 370 ALSDNLSLNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +DK  E    M + GI P+   Y  L  G+ + Q  + A E+   M+  G   N  I  +
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVEVNKFIVDS 489

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +++G   +G ++ A+ +F      G+S +   + TL+ G  +A     A +  Q +    
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRN 549

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLE-------- 540
           + P    + +        G  KEAK IL++++N     +      + V            
Sbjct: 550 MLPDAVVYNVFINCLCILGKFKEAKSILTEMRNMGLKPDQSTYNTMIVSHCRKGETAKAL 609

Query: 541 RLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYLS 600
           +L H+   ++  PNL+    +V+        A++K + LL +  S+   S  + T   + 
Sbjct: 610 KLLHEMKMSSIKPNLITYNTLVAG--LFGTGAVEKAKYLLNEMVSA-GFSPSSLTHRRVL 666

Query: 601 HSCKSGARLPII 612
            +C    RL +I
Sbjct: 667 QACSQSRRLDVI 678



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 38/152 (25%), Positives = 72/152 (47%), Gaps = 1/152 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   L+  L   G+  EA  +   + + G +P+ +TY  L+     Q        +  
Sbjct: 764 IATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILVTGHGKQSNKVEAMRLYC 823

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  P    +NA+I+ F+++G M +A + F  M++ G+ PT+ TY+ L+ G+    
Sbjct: 824 EMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIR 883

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              E  K L  M  +G   P+  T + + RA+
Sbjct: 884 NGTEVKKCLKDMKEKG-FSPSKGTLSFICRAF 914


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 220/457 (48%), Gaps = 11/457 (2%)

Query: 74  SMTKLMNSLIERGKPQEA-QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           ++ +L+  L +  +  +A   +F  + E G+ P + +Y  L+  L ++K+      ++  
Sbjct: 131 TLNQLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLH 190

Query: 133 VEENG---MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           +  +G     P+ + ++ +I+ F + G +++A   F +M   G  P   TY++LI G   
Sbjct: 191 MTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCK 250

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           A    ++  +L  M  +G V PN RTYN+++R +C+   + EA  ++ KM+ SG++PDVV
Sbjct: 251 AQAMNKAEAILQHMFDKG-VMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVV 309

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +   Y + G   +A  V   M   G +PN     I++ GY  +G + +       M
Sbjct: 310 TYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLM 369

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTA 366
              G+      FN+LI  + +      VD+ +    E R N   PDV++YST+++     
Sbjct: 370 IRDGIPFEHRAFNILICAYAK---HGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKI 426

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G ++     F+ M   G+ P+  +++ L  G     E +K EEL   MI  G HP+ +  
Sbjct: 427 GRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFM 486

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            TI+   C +G +  A + FD +   GV PN+ ++ TL+ GY    +   + +    M +
Sbjct: 487 NTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVS 546

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            G+ P   T+  L       G  ++A  +  ++  K+
Sbjct: 547 IGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKD 583



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 222/452 (49%), Gaps = 1/452 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + +++   + G+  +A  +F+ +I  G  P +VTY++L+  L   +  N   +I+ 
Sbjct: 203 VVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQ 262

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G+ P++  +N +I  +   G +EEA+    KM  SGL P   TY  LI+ Y   G
Sbjct: 263 HMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIG 322

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  + D M R+G  KPN   Y++L+  +  +  + +  +++  M   G+  +   +
Sbjct: 323 RCAEARSVFDSMVRKGQ-KPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAF 381

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  AYA++G  D+A     EM  NG++P+  +   +I   CK G++++A+     M  
Sbjct: 382 NILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVS 441

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN++ F  LI G   I +   V+E+   M    ++PD I  +TIM+     G + +
Sbjct: 442 EGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVE 501

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            ++ FD +   G+KP+  +Y+ L  GY    + +++ +    M+  G  P+   +  +++
Sbjct: 502 AQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLN 561

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+  +G ++ A+ ++ +M    V     T   ++ G  +A +   A E+   M   G   
Sbjct: 562 GYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQL 621

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           +  T+  +           EA R+   +++KE
Sbjct: 622 RIETYNTVLGGLCENSCVDEALRMFEDLRSKE 653



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 204/452 (45%), Gaps = 44/452 (9%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L + L+ + +P    A FN+++    +    +     AAL +     S+ + M++   N 
Sbjct: 36  LFDELLPQARPASVHA-FNSVLTVVARADSSSSPRHSAALAV-----SLFNTMARSGVNM 89

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M  +      +I  F   G ++ A   F    + G      T N LIKG     + ++++
Sbjct: 90  MAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAM 149

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG---MKPDVVTYNTI 254
            ++     E    P++ +YN L++  C EK   EA  ++  M A G     P+VV+Y+TI
Sbjct: 150 DMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTI 209

Query: 255 ATAYAQNGEAD-----------------------------------QAEEVIVEMEHNGV 279
              + + GE D                                   +AE ++  M   GV
Sbjct: 210 IDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGV 269

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            PN RT  I+I GYC  G+++EA+R  + M   G+ P++V + LLI+ + +I        
Sbjct: 270 MPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARS 329

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           V   M      P+   Y  +++ ++T G +   +++ D M + GI  +  A++IL   Y 
Sbjct: 330 VFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYA 389

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +    +KA      M ++G  P+VV ++T+I   C  G ++ A+  F++M   G+SPN+ 
Sbjct: 390 KHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNII 449

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           +F +L+ G     +  + EE+   M   G+HP
Sbjct: 450 SFTSLIHGLCSIGEWKKVEELAFEMINRGIHP 481



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 168/348 (48%), Gaps = 1/348 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + +++ L + G+ ++A   FN ++  G  P+++++T+L+  L     +  +  +  
Sbjct: 413 VVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAF 472

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD+IF N +++   + G + EA D F  +   G+ P   +YNTLI GY   G
Sbjct: 473 EMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVG 532

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +ES+K  D M   G ++P+  TYN L+  +     + +A  +  +M    +K   +T 
Sbjct: 533 KMDESIKQFDRMVSIG-LRPDSWTYNALLNGYFKNGRVEDALALYREMFRKDVKFCAITS 591

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N I     Q G    A E+ ++M   G Q    T   ++ G C+   + EALR    ++ 
Sbjct: 592 NIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEALRMFEDLRS 651

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
                ++  FN++I   +++   D    + + M      P VITYS ++ +    G +++
Sbjct: 652 KEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEE 711

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
             ++F  M K G   D+H  +++ +  + + +  +A   L  + E  F
Sbjct: 712 SDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTYLTKIDEKNF 759



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 182/403 (45%), Gaps = 7/403 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+   L+ +  + G   +A   F  + + G +P +V+Y+T++  L    R        +Q
Sbjct: 379 RAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQ 438

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +   G+ P+ I F ++I+     G  ++  +  ++M   G+ P     NT++      G+
Sbjct: 439 MVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGR 498

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             E+    D++   G VKPN+ +YN L+  +C    + E+     +M + G++PD  TYN
Sbjct: 499 VVEAQDFFDMVIHIG-VKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYN 557

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +   Y +NG  + A  +  EM    V+    T  II+ G  + G+I  A      M + 
Sbjct: 558 ALLNGYFKNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDR 617

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFM 369
           G    +  +N ++ G  E      VDE L + ++ R      DV T++ ++NA    G +
Sbjct: 618 GTQLRIETYNTVLGGLCE---NSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRI 674

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D+ K +F  M   G  P    YS++ K  + E   E++++L ++M ++G   +  +   I
Sbjct: 675 DEAKSLFSAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVI 734

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
           I      G + RA     K+ E   S    T   L+   SE +
Sbjct: 735 IRRLLEKGDVRRAGTYLTKIDEKNFSVEASTAALLIPIVSEKK 777



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 107/509 (21%), Positives = 229/509 (44%), Gaps = 58/509 (11%)

Query: 43  KQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTK------------LMNSLIERGKPQE 90
           K +  N++  +   + +CS    +E+ R ++ M+             L+    + G+  E
Sbjct: 267 KGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAE 326

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+++F++++  G KP+   Y  LL     +     +  ++  +  +G+  +   FN +I 
Sbjct: 327 ARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILIC 386

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           A+++ G +++AM  F +M+++GL P   +Y+T+I      G+ E++V   + M  EG + 
Sbjct: 387 AYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEG-LS 445

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN+ ++  L+   C+     +   +  +M   G+ PD +  NTI     + G   +A++ 
Sbjct: 446 PNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDF 505

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
              + H GV+PN  +   +I GYC  GK+ E+++    M   G+ P+   +N L+ G+  
Sbjct: 506 FDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYF- 564

Query: 331 IMDRDG-VDEVLALMKE-FR-------VNPDVI--------------------------- 354
              ++G V++ LAL +E FR       +  ++I                           
Sbjct: 565 ---KNGRVEDALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQL 621

Query: 355 ---TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
              TY+T++        +D+   +F+D+     + D   ++I+    ++    ++A+ L 
Sbjct: 622 RIETYNTVLGGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLF 681

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M+  G  P+V+ ++ +I     +G ++ + ++F  M ++G + +      ++    E 
Sbjct: 682 SAMVLRGPVPHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEK 741

Query: 472 RQPWRAEEILQIM--KAFGVHPQKSTFLL 498
               RA   L  +  K F V    +  L+
Sbjct: 742 GDVRRAGTYLTKIDEKNFSVEASTAALLI 770


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 220/444 (49%), Gaps = 2/444 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T  +  L   GK  EA  I   + + G  P +VTYT L+ AL   ++ +    + +
Sbjct: 264 IYTYTICIRVLGRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFT 323

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++ +   PD + +  +++ FS+ G++++    + +M+  G  P   T+  L+     AG
Sbjct: 324 KMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAG 383

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  LLD M ++G V PNL TYN L+        + +A ++   M + G++P   TY
Sbjct: 384 RINEAFDLLDTMRKQG-VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTY 442

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +   + ++G   +A E   +M+  G+ PN   C   +    + G++ EA      +K 
Sbjct: 443 ILLIDYHGKSGHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKS 502

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P+ V +N+++K + ++   D   ++L+ M + +  PDVI  +++++    AG +++
Sbjct: 503 SGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEE 562

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++F  M +  + P    Y+IL  G  +E + +KA +L  +M   G  PN + F T++ 
Sbjct: 563 AWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLD 622

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             C +  +D A+++F KM      P++ TF T++ G+ +  Q   A  +   MK   + P
Sbjct: 623 CLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRP 681

Query: 492 QKSTFLLLAEARRATGLTKEAKRI 515
              T   L      +G  ++A RI
Sbjct: 682 DHVTLCTLLPGVIKSGQIEDAFRI 705



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 102/439 (23%), Positives = 210/439 (47%), Gaps = 11/439 (2%)

Query: 102 GHKPSLV----TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           G  P++V    T   +L  L + +R   +  +   ++   +  +   +  +  +    G 
Sbjct: 115 GELPNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGG 174

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           + +A     KM+E+G      +YN LI     +G  +E++++   M  EG +KP+L+T++
Sbjct: 175 LRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEG-LKPSLKTFS 233

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            L+ A    +NI     ++ +M + G++P++ TY        ++G+ D+A  ++  M+ +
Sbjct: 234 ALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDDD 293

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G  P+  T  ++I   C   K+ +A+     MK     P+ V +  L+  F +    D V
Sbjct: 294 GCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKV 353

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           +++   M+     PDV+T++ ++NA   AG +++  ++ D M K G+ P+ H Y+ L  G
Sbjct: 354 EKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISG 413

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
            +R    + A +L   M   G  P    +  +I      G   +A+E F+KM   G++PN
Sbjct: 414 LLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPN 473

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           +      ++  +E  +   A+ +   +K+ G+ P   T+ ++ +     G   EA ++LS
Sbjct: 474 IVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLS 533

Query: 518 KIKNKERTNEMEAEEDIPV 536
           ++      ++++ E D+ V
Sbjct: 534 EM------SKVQCEPDVIV 546



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/514 (23%), Positives = 221/514 (42%), Gaps = 74/514 (14%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           + SL E G+  EA+A+FN L   G  P  VTY  ++   +   + +    ++S++ +   
Sbjct: 481 LYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSKVQC 540

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPT---------------------- 176
           +PD I  N++I+   ++G +EEA   F +M+E  L PT                      
Sbjct: 541 EPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQ 600

Query: 177 -------------TSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
                        T T+NTL+       + + ++K+   M+   N +P++ T+N ++  +
Sbjct: 601 LFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTM-NCRPDVLTFNTIIHGF 659

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA----EEVIVEMEHN-- 277
             +  I  A  + H+M    ++PD VT  T+     ++G+ + A    E+   ++  N  
Sbjct: 660 IKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNID 718

Query: 278 ---------GVQPNGRTCGIIISG---------------------YCKEGKIKEALR-FA 306
                    G+     T   I+ G                      CK  K   A   F 
Sbjct: 719 RSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFV 778

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
           +  KE GV P L ++NLLI GF+E+ + +    +   MK     PD  TY+++++A   +
Sbjct: 779 KFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKS 838

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G +++  +++D+M   G KP+   Y+++    V+    +KA +L   ++   F P    F
Sbjct: 839 GKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTF 898

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
             +I G    G +D A E+FD M  +G  PN   +  L+ GY +      A E  + M  
Sbjct: 899 GPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVK 958

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            G+ P   ++ +L +     G   +A     K+K
Sbjct: 959 EGIRPDLKSYTILVDILCIAGRVDDALHYFEKLK 992



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/458 (23%), Positives = 203/458 (44%), Gaps = 71/458 (15%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           TY  +  +L I+       S + ++ E G   ++  +N +I+   +SG  +EA++ + +M
Sbjct: 161 TYLIIFKSLFIRGGLRQAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRM 220

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
              GL P+  T++ L+   G     +  + LL+ M   G ++PN+ TY + +R    +  
Sbjct: 221 VSEGLKPSLKTFSALMVASGKRRNIKTVMGLLEEMESMG-LRPNIYTYTICIRVLGRDGK 279

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATA------------------------------- 257
           I EA+ +M +M   G  PDVVTY  +  A                               
Sbjct: 280 IDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVT 339

Query: 258 ----YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
               ++  G  D+ E++  EME +G  P+  T  I+++  CK G+I EA     TM++ G
Sbjct: 340 LLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQG 399

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN------------ 361
           V PNL  +N LI G +     D   ++ + M+   V P   TY  +++            
Sbjct: 400 VLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKAL 459

Query: 362 -----------------------AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
                                  + +  G + + K +F+++  +G+ PD+  Y+++ K Y
Sbjct: 460 ETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCY 519

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +  + ++A +LL  M +    P+V++  ++I      G ++ A ++F +M E  ++P +
Sbjct: 520 SKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTV 579

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            T+  L+ G  +  Q  +A ++ + M   G  P   TF
Sbjct: 580 VTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITF 617



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 96/357 (26%), Positives = 167/357 (46%), Gaps = 3/357 (0%)

Query: 141  DSIFFNAVINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
            DS+    +I    +      A + F K  KE G+ PT   YN LI G+      E +  L
Sbjct: 754  DSVLI-PIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNL 812

Query: 200  LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
             + M   G   P+  TYN L+ A      I E +++  +M   G KP+ +TYN + +   
Sbjct: 813  FEEMKSAG-CAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLV 871

Query: 260  QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
            ++   D+A ++   +      P   T G +I G  K G++ +A      M  YG  PN  
Sbjct: 872  KSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSA 931

Query: 320  IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            I+N+L+ G+ ++   D   E    M +  + PD+ +Y+ +++    AG +D     F+ +
Sbjct: 932  IYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKL 991

Query: 380  GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
             +AG+ PD  AY+++  G  R Q  E+A  L   M   G  P++  + ++I      G +
Sbjct: 992  KQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMI 1051

Query: 440  DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            + A ++++++   G+ PN+ T+  L+ GY+ +     A  I + M   G  P   TF
Sbjct: 1052 EEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 110/486 (22%), Positives = 212/486 (43%), Gaps = 37/486 (7%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            TV +   L+  L + G+ Q+A  +F ++   G  P+ +T+ TLL  L      +    + 
Sbjct: 578  TVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMF 637

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++      PD + FN +I+ F +   ++ A+  F +MK+  L P   T  TL+ G   +
Sbjct: 638  YKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKL-LRPDHVTLCTLLPGVIKS 696

Query: 191  GKPEESVKLLD---------------------LMSREGNVKPNLRTYNVLVRAWCNE--- 226
            G+ E++ ++ +                     +++  G  K  L    ++ RA C +   
Sbjct: 697  GQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSV 756

Query: 227  -----------KNITEAWNVMHKMAAS-GMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
                       K  + A NV  K     G+KP +  YN +   + +    + A  +  EM
Sbjct: 757  LIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEM 816

Query: 275  EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
            +  G  P+  T   +I  + K GKI E       M   G  PN + +N++I   V+    
Sbjct: 817  KSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRL 876

Query: 335  DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
            D   ++   +     +P   T+  +++    +G +D   E+FD M   G +P++  Y+IL
Sbjct: 877  DKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNIL 936

Query: 395  AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
              GY +    + A E    M++ G  P++  +T ++   C  G +D A+  F+K+ + G+
Sbjct: 937  VNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGL 996

Query: 455  SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
             P+L  +  ++ G   +++   A  +   M+  G+ P   T+  L       G+ +EA +
Sbjct: 997  DPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGK 1056

Query: 515  ILSKIK 520
            I  +++
Sbjct: 1057 IYEELQ 1062



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 106/461 (22%), Positives = 203/461 (44%), Gaps = 9/461 (1%)

Query: 64   MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT---- 118
            M   +CR  V +   +++  I++ + + A  +F+ + +   +P  VT  TLL  +     
Sbjct: 640  MTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM-KKLLRPDHVTLCTLLPGVIKSGQ 698

Query: 119  IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
            I+  F        QV   G + D  F+  V+         E+A+    ++    +    S
Sbjct: 699  IEDAFRITEDFFYQV---GSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDS 755

Query: 179  TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
                +IK      K   +  +    ++E  VKP L+ YN+L+  +    N+  AWN+  +
Sbjct: 756  VLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEE 815

Query: 239  MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
            M ++G  PD  TYN++  A+ ++G+ ++  ++  EM   G +PN  T  ++IS   K  +
Sbjct: 816  MKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNR 875

Query: 299  IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
            + +A+     +      P    F  LI G ++    D   E+   M  +   P+   Y+ 
Sbjct: 876  LDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNI 935

Query: 359  IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
            ++N +   G +D   E F  M K GI+PD  +Y+IL          + A      + ++G
Sbjct: 936  LVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAG 995

Query: 419  FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
              P++V +  +I+G       + A+ +F +M   G+ P+L T+ +L+           A 
Sbjct: 996  LDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAG 1055

Query: 479  EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            +I + ++  G+ P   T+  L      +G ++ A  I  K+
Sbjct: 1056 KIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKM 1096



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 56/174 (32%), Positives = 90/174 (51%), Gaps = 1/174 (0%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L+N   + G    A   F  +++ G +P L +YT L+  L I  R +       ++++ G
Sbjct: 936  LVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAG 995

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            +DPD + +N +IN    S   EEA+  F +M+  G+ P   TYN+LI   GI G  EE+ 
Sbjct: 996  LDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAG 1055

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
            K+ + +   G +KPN+ TYN L+R +    N   A+ +  KM   G  P+  T+
Sbjct: 1056 KIYEELQFIG-LKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTF 1108



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 4/163 (2%)

Query: 57   QTHCSFC--MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTL 113
             T C F   M KE  R  ++S T L++ L   G+  +A   F  L + G  P LV Y  +
Sbjct: 947  DTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLM 1006

Query: 114  LAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL 173
            +  L   +R     S+  +++  G+ PD   +N++I      G +EEA   + +++  GL
Sbjct: 1007 INGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGL 1066

Query: 174  TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
             P   TYN LI+GY ++G  E +  +   M   G   PN  T+
Sbjct: 1067 KPNVFTYNALIRGYTLSGNSELAYGIYKKM-MVGGCDPNTGTF 1108



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 52/106 (49%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            ++N L    + +EA ++F+ +   G  P L TY +L+  L I         I  +++  G
Sbjct: 1006 MINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIG 1065

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            + P+   +NA+I  ++ SGN E A   + KM   G  P T T+  L
Sbjct: 1066 LKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQL 1111


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 238/504 (47%), Gaps = 74/504 (14%)

Query: 88  PQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNA 147
           PQ +   F++LI     P+  T+  L+     +       S +S+++  G+ PD++ +N 
Sbjct: 190 PQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNT 249

Query: 148 VINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
           ++NA    G + EA     +MK+ G+ PT +TYNTL+  Y   G  +++  +++ M+  G
Sbjct: 250 LLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFG 309

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM-KPDVVTYNTIATAYAQNGEADQ 266
             +P+L TYNVL    C    + EA+ +  +M   G+  PDVVTYNT+  A  +   +  
Sbjct: 310 -FEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSD 368

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI- 325
           A  ++ EM   GV+ +  T  II+ G C+EG+++EAL     M E G+ P+++ +N LI 
Sbjct: 369 ALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLID 428

Query: 326 ---------KGFVEIMD---RDGV------------------------------------ 337
                    K FV +MD   R G+                                    
Sbjct: 429 ASCKAGNVAKAFV-LMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFV 487

Query: 338 -DEV------LALMKEFR---------------VNPDVITYSTIMNAWSTAGFMDKCKEI 375
            DEV       A  KE++               + P + TY+T++   ST G + +  + 
Sbjct: 488 PDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDK 547

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            +++ + G+ PD   Y+I+   Y +E + EKA +    M+E+ F P+VV   T+++G C 
Sbjct: 548 LNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCL 607

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G +++A+++F+   E G   ++ T+ TL+    +      A      M+  G+ P   T
Sbjct: 608 YGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFT 667

Query: 496 FLLLAEARRATGLTKEAKRILSKI 519
           + +L  A    G + EA+++L K+
Sbjct: 668 YNVLLSALSEAGRSVEAQKMLHKL 691



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 215/428 (50%), Gaps = 5/428 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIER-GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M KE     R+    + S   R G  ++A  +   +   G +P L TY  L A L    +
Sbjct: 270 MKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGK 329

Query: 123 FNSIHSIMSQVEENGM-DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
            +    +  ++E+ G+  PD + +N +++A  +     +A++   +M+E G+  +  T+N
Sbjct: 330 VDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHN 389

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            ++KG    G+ EE++  L++M+ EG + P++ TYN L+ A C   N+ +A+ +M +M  
Sbjct: 390 IIVKGLCREGQLEEALGRLEMMTEEG-LTPDVITYNTLIDASCKAGNVAKAFVLMDEMVR 448

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
           SG+K D  T NT+     +    ++AEE++      G  P+  + G +++ Y KE K + 
Sbjct: 449 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEP 508

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD-RDGVDEVLALMKEFRVNPDVITYSTIM 360
           AL     M +  + P++  +N LIKG   +    + +D++  LM E  + PD  TY+ I+
Sbjct: 509 ALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELM-EMGLVPDDTTYNIII 567

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           +A+   G ++K  +  + M +   KPD    + L  G       EKA +L  + +E G  
Sbjct: 568 HAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKK 627

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
            +V+ + T+I   C D  +D A+  F  M   G+ P++ T+  L+   SEA +   A+++
Sbjct: 628 VDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKM 687

Query: 481 LQIMKAFG 488
           L  +   G
Sbjct: 688 LHKLNESG 695



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 194/395 (49%), Gaps = 39/395 (9%)

Query: 146 NAVINAF--SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
           NAV++A   S S + + ++D F  +    L P   T+N L+  +   G   +++  L  M
Sbjct: 176 NAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKM 235

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
              G + P+  TYN L+ A C +  + EA  ++ +M   G+ P   TYNT+ +AYA+ G 
Sbjct: 236 QGFG-LSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGW 294

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG-VHPNLVIFN 322
             QA +V+  M   G +P+  T  ++ +G C+ GK+ EA +    M++ G V P++V +N
Sbjct: 295 IKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYN 354

Query: 323 LLIKG------------FVEIMDRDGVDEVLA-----------------------LMKEF 347
            L+               +E M   GV   L                        +M E 
Sbjct: 355 TLVDACFKCQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEE 414

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            + PDVITY+T+++A   AG + K   + D+M ++G+K D    + L     +E+  E+A
Sbjct: 415 GLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEA 474

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           EELL    + GF P+ V + T+++ +  +   + A+ ++D+M +  ++P++ T+ TL+ G
Sbjct: 475 EELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKG 534

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            S   +   A + L  +   G+ P  +T+ ++  A
Sbjct: 535 LSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHA 569



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 190/462 (41%), Gaps = 73/462 (15%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGG-HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           L   L + GK  EA  + + + + G   P +VTY TL+ A    +R +   +++ ++ E 
Sbjct: 320 LAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREK 379

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G+    +  N ++      G +EEA+     M E GLTP   TYNTLI     AG   ++
Sbjct: 380 GVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKA 439

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
             L+D M R G +K +  T N L+   C EK   EA  ++      G  PD V+Y T+  
Sbjct: 440 FVLMDEMVRSG-LKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMA 498

Query: 257 AYAQN-----------------------------------GEADQAEEVIVEMEHNGVQP 281
           AY +                                    G+  +A + + E+   G+ P
Sbjct: 499 AYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVP 558

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T  III  YCKEG +++A +F   M E    P++V  N L+ G       +   ++ 
Sbjct: 559 DDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLF 618

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
               E     DVITY+T++ A      +D     F DM   G++PD   Y++L       
Sbjct: 619 ESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEA 678

Query: 402 QEPEKAEELLMTMIESG------FHPNVVI------------------------------ 425
               +A+++L  + ESG      F+P++                                
Sbjct: 679 GRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQES 738

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           +   I   C  G +  A  V D+M + G+S +  T+ TLM G
Sbjct: 739 YNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEG 780



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 84/360 (23%), Positives = 159/360 (44%), Gaps = 38/360 (10%)

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT--EA 232
           PT++  +  +  Y     P  + +LL    R G V+P+L+  N ++ A     + +   +
Sbjct: 134 PTSALADAALSTYARLRLPHLAAQLLHSFRRRGCVRPSLQAANAVLSALARSPSTSPQAS 193

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
            +  H + A  + P+  T+N +   +   G    A   + +M+  G+ P+  T   +++ 
Sbjct: 194 LDAFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNA 253

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF------------VEIMDRDG---- 336
           +C++G + EA      MK+ G+ P    +N L+  +            VE M   G    
Sbjct: 254 HCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPD 313

Query: 337 ----------------VDEVLALMKEFR----VNPDVITYSTIMNAWSTAGFMDKCKEIF 376
                           VDE   L  E      V+PDV+TY+T+++A            + 
Sbjct: 314 LWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLL 373

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M + G+K     ++I+ KG  RE + E+A   L  M E G  P+V+ + T+I   C  
Sbjct: 374 EEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKA 433

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G++ +A  + D+M   G+  +  T  TL++   + ++   AEE+L+     G  P + ++
Sbjct: 434 GNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSY 493



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 33/138 (23%), Positives = 61/138 (44%), Gaps = 2/138 (1%)

Query: 381 KAGIKPDAHAYSILAKGYVRE--QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           +  ++P   A + +     R     P+ + +   ++I    HPN   F  ++   CS G+
Sbjct: 165 RGCVRPSLQAANAVLSALARSPSTSPQASLDAFHSLIALRLHPNHYTFNLLVHTHCSKGT 224

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +  A+    KM   G+SP+  T+ TL+  +        A  +L  MK  G+ P ++T+  
Sbjct: 225 LADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNT 284

Query: 499 LAEARRATGLTKEAKRIL 516
           L  A    G  K+A  ++
Sbjct: 285 LVSAYARLGWIKQATDVV 302


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 247/516 (47%), Gaps = 12/516 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LM+ L + G+ +EA  +   +   G +  +V Y+TL++    +   +   ++  ++ E G
Sbjct: 51  LMDGLCKEGRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKG 110

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ + ++ +IN F + G   EA      M E G+ P   TY  +I G    G+  +++
Sbjct: 111 ISPNVVVYSCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKAL 170

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L DLM+ +G  +P+  TYNVL+   C E  I +A+ +   M   G + +VV+YNT+   
Sbjct: 171 DLFDLMTEKGE-EPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMG 229

Query: 258 YAQNGEADQAEEVIVEMEHNG--VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              NG+ D+A ++   +  +G  V+P+  T   +I G CKEG++ +A+    TM E G  
Sbjct: 230 LCNNGKLDEAMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSF 289

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            NL   ++LI  +++    D   E+   + +  + P   TYS +++ +     ++  K +
Sbjct: 290 GNLFTCHILIGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGL 349

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F  M  +G+ P    Y+ L     +E   E+A  L   M ES   P+ + F  +I G   
Sbjct: 350 FSRMKISGLSPTLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLK 409

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G +  A E+ + M + G++P+  T+ + +   S+  Q   A+     M A G+ P    
Sbjct: 410 AGDIHSAKELLNDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHV 469

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNL 555
           +  L    +  GL  E + +++ ++   +  +M    D+ + +   +      +A + ++
Sbjct: 470 YDSLI---KGFGLNDEIEEVINLLR---QMADMGVILDLEITN--SILTFLCNSAEHLHV 521

Query: 556 LQ-IPNVVSSDQKGSAAALKKGRMLLRDADSSLECS 590
           ++ +PN  S    G++ +  K  M ++  +  L+ S
Sbjct: 522 MELLPNFSSESSGGTSISCDKLLMKIQKFNPKLQIS 557



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 204/421 (48%), Gaps = 9/421 (2%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P +V+Y T++  L  +KR      ++ ++E +  +P+S  +  +++   + G +EEAM  
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
             +MK  GL      Y+TLI G+   G  +    L D M  +G + PN+  Y+ L+  +C
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKG-ISPNVVVYSCLINGFC 126

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
            +    EA  V+H M   G++PDV TY  +     ++G A +A ++   M   G +P+  
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T  ++I+G CKEG I +A +   TM E G    +V +N LI G     +   +DE + L 
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLC---NNGKLDEAMKLF 243

Query: 345 KEF-----RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
                    V PDVIT++T++      G +DK  EI+D M + G   +     IL   Y+
Sbjct: 244 SSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYI 303

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +    +KA EL   + + G  P+   ++ +I G+C    ++ A  +F +M   G+SP L 
Sbjct: 304 KSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLF 363

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + TLM    +     +A  + Q MK     P   +F ++ +     G    AK +L+ +
Sbjct: 364 DYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDM 423

Query: 520 K 520
           +
Sbjct: 424 Q 424



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 99/356 (27%), Positives = 182/356 (51%), Gaps = 5/356 (1%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN-VKPNLRTYNVLVRAWCNE 226
           MK   + P   +YNT+I G     + E++V LL  +  EG+  +PN  TY +L+   C E
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLL--VEMEGSSCEPNSFTYCILMDGLCKE 58

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
             + EA  ++ +M   G++ DVV Y+T+ + +   G  D+ + +  EM   G+ PN    
Sbjct: 59  GRVEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVY 118

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             +I+G+CK+G  +EA     TM E G+ P++  +  +I G  +        ++  LM E
Sbjct: 119 SCLINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTE 178

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
               P  +TY+ ++N     G +    +IF+ M + G + +  +Y+ L  G     + ++
Sbjct: 179 KGEEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDE 238

Query: 407 AEELLMTMIESG--FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           A +L  +++E G    P+V+ F T+I G C +G +D+A+E++D M E G   NL T   L
Sbjct: 239 AMKLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHIL 298

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  Y ++    +A E+ + +   G+ P  +T+ ++ +      +   AK + S++K
Sbjct: 299 IGEYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMK 354



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 54/180 (30%), Positives = 95/180 (52%), Gaps = 2/180 (1%)

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           MK   + PD+++Y+TI+N       ++K  ++  +M  +  +P++  Y IL  G  +E  
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            E+A  LL  M   G   +VV+++T+ISG+CS G +DR   +FD+M E G+SPN+  +  
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 464 LMWGYSEARQPWR-AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           L+ G+ + +  WR A  +L  M   G+ P   T+  +       G  ++A  +   +  K
Sbjct: 121 LINGFCK-KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEK 179



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 104/220 (47%)

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           MK   + P++V +N +I G  +    +   ++L  M+     P+  TY  +M+     G 
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +++   +  +M + G++ D   YS L  G+  +   ++ + L   M+E G  PNVV+++ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I+G+C  G    A  V   M E G+ P++ T+  ++ G  +  +  +A ++  +M   G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEM 528
             P   T+ +L       G   +A +I   +  K +  E+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEV 220



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 81/155 (52%), Gaps = 1/155 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+     LM SL +    ++A+ +F  + E   +P  +++  ++         +S   ++
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + +++ G+ PD+  +++ IN  S+ G MEEA   F  M  SG+TP    Y++LIKG+G+ 
Sbjct: 421 NDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLN 480

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
            + EE + LL  M+  G V  +L   N ++   CN
Sbjct: 481 DEIEEVINLLRQMADMG-VILDLEITNSILTFLCN 514


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 219/445 (49%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L++  K +  +   +N++  G +P + T+  L+ AL    +      +M ++E+ G
Sbjct: 166 LLNVLVDGNKLKLVEIAHSNMVSRGIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFG 225

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   F  ++  F E GN++ AM    +M E+G   T  T N L+ G+   G+ EE++
Sbjct: 226 LLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEAL 285

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           + ++ MS      P+  T+N+LV       ++  A  VM  M   G  PD+ TYN++ + 
Sbjct: 286 RFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISG 345

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + GE D+A +V+ +M      PN  T   IIS  CKE +++EA + A  +   G+ P+
Sbjct: 346 LCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPD 405

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  +N LI+G     +     E+   MK    +PD  TY+ ++++    G + +   +  
Sbjct: 406 VCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLK 465

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M  +G   +   Y+ L  G+ + +   +AEE+   M   G   N V + T+I G C   
Sbjct: 466 EMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSE 525

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ A ++ D+M   G+ P+  T+ +L+  + +A    +A +I+Q M + G  P   T+ 
Sbjct: 526 RVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYG 585

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L       G  + A ++L  I+ K
Sbjct: 586 TLIAGLCKAGRVEAATKLLRTIQMK 610



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 188/391 (48%), Gaps = 2/391 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L + G  + A  + + ++  G  P + TY +L++ L      +    +++Q+ E  
Sbjct: 307 LVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERD 366

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+++ +N +I+   +   +EEA      +   G+ P   TYN+LI+G  ++     ++
Sbjct: 367 CSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAM 426

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L   M  +G   P+  TYN+L+ + C    + EA N++ +M  SG   +V+TYNT+   
Sbjct: 427 ELYKEMKTKG-CHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDG 485

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + +N    +AEE+  +ME  GV  N  T   +I G CK  +++EA +    M   G+ P+
Sbjct: 486 FCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPD 545

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +N L+  F +  D     +++  M      PD++TY T++     AG ++   ++  
Sbjct: 546 KFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLR 605

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +   GI    HAY+ + +   R +  ++A  L   MIE    P+ V +  +  G C  G
Sbjct: 606 TIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGG 665

Query: 438 S-MDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +  A++   +M E G  P   +F  L  G
Sbjct: 666 GPIGEAVDFVMEMLERGYVPEFSSFYMLAEG 696



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 227/498 (45%), Gaps = 44/498 (8%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           ++ T +M   IE G    A  +   ++E G   + VT   L+     + R   I   +  
Sbjct: 231 KTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGR---IEEALRF 287

Query: 133 VEE----NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +EE     G  PD   FN ++N  S++G+++ A++    M   G  P   TYN+LI G  
Sbjct: 288 IEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLC 347

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G+ +E+VK+L+ M  E +  PN  TYN ++   C E  + EA  +   +   G+ PDV
Sbjct: 348 KLGEVDEAVKVLNQMI-ERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDV 406

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TYN++      +     A E+  EM+  G  P+  T  ++I   C  GK++EAL   + 
Sbjct: 407 CTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKE 466

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M+  G   N++ +N LI GF +       +E+   M+   V+ + +TY+T+++    +  
Sbjct: 467 MEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSER 526

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +++  ++ D M   G++PD   Y+ L   + +  + +KA +++ TM   G  P++V + T
Sbjct: 527 VEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGT 586

Query: 429 IISGWCSDGSMD-----------------------------------RAIEVFDKMCEHG 453
           +I+G C  G ++                                    A+ +F +M E  
Sbjct: 587 LIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKA 646

Query: 454 VSPNLKTFETLMWGYSEARQPW-RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            +P+  T++ +  G  +   P   A + +  M   G  P+ S+F +LAE   +  +    
Sbjct: 647 EAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTL 706

Query: 513 KRILSKIKNKERTNEMEA 530
            +++  +  K + ++ E 
Sbjct: 707 IKLIDMVMEKAKFSDNEV 724



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 187/400 (46%), Gaps = 9/400 (2%)

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
           IH      ++    P S  F  V++   ++G  +   D   +MK S       +    I+
Sbjct: 73  IHLFYWASKQPNFKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIE 132

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
            Y   G   E ++ +D M  E  V  N   YN L+    +   +         M + G++
Sbjct: 133 SYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSRGIR 192

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PDV T+N +  A  +  +   A  ++ EME  G+ P+ +T   I+ G+ +EG +  A+R 
Sbjct: 193 PDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRV 252

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVN----PDVITYSTIM 360
              M E G     V  N+L+ GF     ++G ++E L  ++E  +     PD  T++ ++
Sbjct: 253 KEQMVEAGCVVTNVTVNVLVNGFC----KEGRIEEALRFIEEMSLREGFFPDKYTFNMLV 308

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           N  S  G +    E+ D M + G  PD + Y+ L  G  +  E ++A ++L  MIE    
Sbjct: 309 NGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCS 368

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN V + TIIS  C +  ++ A ++   +   G+ P++ T+ +L+ G   +R    A E+
Sbjct: 369 PNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMEL 428

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            + MK  G HP + T+ +L ++    G  +EA  +L +++
Sbjct: 429 YKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEME 468



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/214 (28%), Positives = 102/214 (47%), Gaps = 4/214 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R V +   L++   +  +  EA+ IF+ +   G   + VTY TL+  L   +R      +
Sbjct: 474 RNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQL 533

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           M Q+   G+ PD   +N+++  F ++G++++A D    M   G  P   TY TLI G   
Sbjct: 534 MDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCK 593

Query: 190 AGKPEESVKLLDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
           AG+ E + KLL  +  +G N+ P+   YN +++A    K   EA  +  +M      PD 
Sbjct: 594 AGRVEAATKLLRTIQMKGINLTPH--AYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDA 651

Query: 249 VTYNTIATAYAQ-NGEADQAEEVIVEMEHNGVQP 281
           VTY  +     Q  G   +A + ++EM   G  P
Sbjct: 652 VTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVP 685


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 231/451 (51%), Gaps = 7/451 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L ++G+  EA+ +  ++   G  P+  T+  L+             +++  + +N 
Sbjct: 238 ILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNS 297

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD+  +N +I+ F + G + EAM    +M+   L+P   TYNTLI G    G  EE  
Sbjct: 298 VVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGF 357

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL++ M   G +KPN  TYNV+V+ +  +  + E    + KM  SG  PD+VTYNT+ + 
Sbjct: 358 KLIEEMEGRG-MKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISW 416

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G+ D+A  ++ EM   G++ +  T   ++   C+E K+ EA     + +  G   +
Sbjct: 417 HCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVD 476

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            V +  LI G+ +    +   + L L   MKE  + P +ITY++++      G  ++  +
Sbjct: 477 EVSYGTLIIGYFK---HEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAID 533

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
             D++ ++G+ PD   Y+ +  GY +E + EKA +    M+E  F P+VV   T++ G C
Sbjct: 534 KLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLC 593

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +G +++A+++F+     G   +  ++ T++    + ++   A ++L+ M+   + P   
Sbjct: 594 KEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCY 653

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNKERT 525
           T+  +       G  K+A+  +SKI  K ++
Sbjct: 654 TYNAILGGLTDAGRMKDAEEFISKIAEKGKS 684



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 218/417 (52%), Gaps = 10/417 (2%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI------MSQVEENGMD 139
           G+P +A  IFN +   G +P+L+T  TLL AL    RF S HSI       +   + G+ 
Sbjct: 138 GRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALV---RFPSSHSIRLSKAVFTDFIKIGVK 194

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
            ++  FN +I+         EA+    KM++ G  P   TYNT++ G    G+  E+  L
Sbjct: 195 INTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDL 254

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           L  M  +G + PN  T+N+LV   C    + EA NV+  M+ + + PD  TYN + + + 
Sbjct: 255 LLDMKNKG-LFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFC 313

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           + G   +A  +  EME+  + P+  T   +I+G  + G  +E  +    M+  G+ PN V
Sbjct: 314 KQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSV 373

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            +N+++K FV+    D VD+ +  M+E    PD++TY+T+++     G MD+   + D+M
Sbjct: 374 TYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEM 433

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
           G+ G+K D    + + +   RE++ ++A +LL +    G+  + V + T+I G+      
Sbjct: 434 GRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKA 493

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            +A+ ++D+M E  + P++ T+ +++ G  +  +  +A + L  +   G+ P + T+
Sbjct: 494 SQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITY 550



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 193/424 (45%), Gaps = 71/424 (16%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++   ++G+  EA  +   +      P +VTY TL+              ++ ++E  G
Sbjct: 308 MISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRG 367

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M P+S+ +N ++  F + G M+E   T  KM+ESG  P   TYNTLI  +   GK +E+ 
Sbjct: 368 MKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAF 427

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM--------------------- 236
           +L+D M R+G +K +  T N ++RA C E+ + EA +++                     
Sbjct: 428 RLMDEMGRKG-LKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIG 486

Query: 237 ---HKMAASGMK-----------PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
              H+ A+  ++           P ++TYN++     Q G+ +QA + + E+  +G+ P+
Sbjct: 487 YFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPD 546

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   II GYC+EG++++A +F   M E    P++V  N L+ G      ++G+ E   
Sbjct: 547 EITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLC----KEGMLE--K 600

Query: 343 LMKEFRV------NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            +K F        + D ++Y+TI+ +        +  ++ ++M +  + PD + Y+ +  
Sbjct: 601 ALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILG 660

Query: 397 GYVREQEPEKAEELLMTMIESGF-----------------------HPNVVIFTTIISGW 433
           G       + AEE +  + E G                        HPN + ++  I+  
Sbjct: 661 GLTDAGRMKDAEEFISKIAEKGKSENQFLELGKRQDARTSEIPQEPHPNAIAYSNKINEL 720

Query: 434 CSDG 437
           CS G
Sbjct: 721 CSQG 724



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/217 (23%), Positives = 87/217 (40%), Gaps = 36/217 (16%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           KE   ++ +   ++  L + GK  +A    + L+E G  P  +TY               
Sbjct: 506 KEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITY--------------- 550

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
                               N +I+ + + G +E+A     KM E    P   T NTL+ 
Sbjct: 551 --------------------NTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLC 590

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G    G  E+++KL +    +G    +  +YN ++ + C EK   EA++++ +M    + 
Sbjct: 591 GLCKEGMLEKALKLFNTWISKGK-DVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLG 649

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
           PD  TYN I       G    AEE I ++   G   N
Sbjct: 650 PDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSEN 686


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 229/454 (50%), Gaps = 15/454 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   ++G+P + + +   +     +P++V+Y  LL  L   +R++    ++  +   G
Sbjct: 16  LVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRG 75

Query: 138 --MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
               PD + ++ +++ + ++G +EE+ +   ++   GL P    Y  ++     + +  E
Sbjct: 76  GRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGE 135

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +++LL+ M R G   P L T+N L+   C EKN+  A +++ KMAASG+K DVVTYNT+ 
Sbjct: 136 ALELLEEMIRAGCC-PTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLM 194

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G   +AE+++  M+ +G  P+       + G CK GK+ +A +    M++    
Sbjct: 195 DGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHD 254

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR----VNPDVITYSTIMNAWSTAGFMDK 371
           PN+V +N ++ G  +      +D  L +M++         +V+ YST+++     G   +
Sbjct: 255 PNVVTYNTILDGLCK---SGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            + + + M +AG +PD   YS L  G  +  + E+A E +  M   G  PN V + +++ 
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371

Query: 432 GWCSDGSMDRAIEVFDKM-----CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           G CS G +  A  + ++M       H   P++ T+  L+ G  +A +   A +  Q M++
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS 431

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            G  P   ++  + E    +G   +A+ ILS+++
Sbjct: 432 QGCDPDGVSYSTIVEGLARSGRALQAEMILSEVR 465



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 177/348 (50%), Gaps = 4/348 (1%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M  +G  P + T+N L+ G+   G+P +  +LL+ M+   +++PN+ +YN L+   C  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAAR-DIQPNVVSYNGLLEGLCKLE 59

Query: 228 NITEAWNVMHKMAASGMK--PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
              EA  ++  M + G +  PD+VTY+T+ + Y + G+ +++ E++ E+   G++P+   
Sbjct: 60  RWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALM 119

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
              +++  CK  ++ EAL     M   G  P L+ FN LI G     + +  D +L  M 
Sbjct: 120 YTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMA 179

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
              V  DV+TY+T+M+    AG + + +++ + M  +G  PD  AYS    G  +  +  
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETL 464
            A ++L  M +S   PNVV + TI+ G C  G +D A+E+ ++M    G   N+  + T+
Sbjct: 240 DAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           + G  +  +   A  +++ M   G  P   T+  L       G  +EA
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEA 347



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 184/412 (44%), Gaps = 42/412 (10%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L++   + GK +E++ +   +I  G +P  + YT ++A+L    R      ++ ++  
Sbjct: 86  STLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIR 145

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P  I FN +I+      N+E A     KM  SG+     TYNTL+ G   AG+ +E
Sbjct: 146 AGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQE 205

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +LL+ M   G   P++  Y+  V   C    + +A  V+ +M  S   P+VVTYNTI 
Sbjct: 206 AEQLLERMKASG-CAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTIL 264

Query: 256 TAYAQNGEADQAEEVIVEM-EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
               ++G+ D A E++ +M   +G   N      ++ G CK G+ +EA      M   G 
Sbjct: 265 DGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGC 324

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P++V                                   TYS+++N    AG +++  E
Sbjct: 325 RPDVV-----------------------------------TYSSLVNGLCKAGKIEEAVE 349

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH-----PNVVIFTTI 429
              +M   G KP+A  Y  L  G        +AE ++  M   G       P+V  +  +
Sbjct: 350 AVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNAL 409

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           I G C  G +D A++ F +M   G  P+  ++ T++ G + + +  +AE IL
Sbjct: 410 IGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMIL 461



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 147/304 (48%), Gaps = 5/304 (1%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C T+ +   L++        + A ++   +   G K  +VTY TL+  L    R      
Sbjct: 149 CPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQ 208

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++ +++ +G  PD + +++ +    +SG + +A     +M++S   P   TYNT++ G  
Sbjct: 209 LLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLC 268

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            +GK + ++++++ M+       N+  Y+ +V   C      EA +VM  MA +G +PDV
Sbjct: 269 KSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDV 328

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTY+++     + G+ ++A E + EM   G +PN  T   ++ G C  G++ EA R    
Sbjct: 329 VTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEE 388

Query: 309 MKEYGVH-----PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
           M   G       P++  +N LI G  +    D   +    M+    +PD ++YSTI+   
Sbjct: 389 MSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448

Query: 364 STAG 367
           + +G
Sbjct: 449 ARSG 452



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 134/250 (53%), Gaps = 2/250 (0%)

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M+  G  PN  T   +++G+ K+G+  +  R   TM    + PN+V +N L++G  ++  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 334 RDGVDEVLALM--KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
               +E++  M  +  R  PD++TYST+++ +  AG +++ +E+  ++   G++PDA  Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + +     +     +A ELL  MI +G  P ++ F T+ISG C + +++ A  +  KM  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            GV  ++ T+ TLM G  +A +   AE++L+ MKA G  P    +         +G   +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 512 AKRILSKIKN 521
           A ++L ++++
Sbjct: 241 AHQVLEQMRD 250


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 211/431 (48%), Gaps = 2/431 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++++L ++G   E+ A+   +++ G   +  T    +  L    R     +++ 
Sbjct: 115 VATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVE 174

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++   + PD + +N ++    +   ++EA     +M   G  P   TYNT+I GY    
Sbjct: 175 SMDAY-IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRD 233

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+ +LL     +G V P+  TY  L+   C E ++  A  + ++  A  +KPD+V Y
Sbjct: 234 MLQEATELLKDAIFKGFV-PDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVY 292

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++     + G    A +V+ EM  +G  P+  T  I+I+G CK G I +A         
Sbjct: 293 NSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIV 352

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P++  FN +I G+ + +  D   +++  M  + + PD ITY++++N    AG   +
Sbjct: 353 KGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKE 412

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E F++M   G +P+A  Y+IL + + +  + E+A  +++ M + G  P+ + F T+I 
Sbjct: 413 VNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIH 472

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C +G +D A  +F K+ E G S    TF  L+  YS       AE+I   M + G  P
Sbjct: 473 GFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKP 532

Query: 492 QKSTFLLLAEA 502
              T+ +L + 
Sbjct: 533 DLYTYRVLVDG 543



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 200/421 (47%), Gaps = 1/421 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM  L +  K QEA      ++  G  P   TY T++     +        ++ 
Sbjct: 184 VVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLK 243

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
                G  PD + + ++IN     G++E A++ F + +   L P    YN+L+KG    G
Sbjct: 244 DAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQG 303

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++++++ M  +G   P++ TYN+++   C   NI++A  VM+     G  PDV T+
Sbjct: 304 LILHALQVMNEMVEDG-CHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTF 362

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   Y +  + D A +++  M   G+ P+  T   +++G CK GK KE       M  
Sbjct: 363 NTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMIL 422

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PN + +N+LI+ F +I   +    V+  M +  + PD I+++T+++ +   G +D 
Sbjct: 423 KGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDG 482

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F  + + G    A  ++IL   Y  +   + AE++   MI  G+ P++  +  ++ 
Sbjct: 483 AYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYTYRVLVD 542

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C   ++DRA     +M   G  P++ TF  ++   +   +   A  I+ IM   GV P
Sbjct: 543 GSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVAIIHIMVRMGVVP 602

Query: 492 Q 492
           +
Sbjct: 603 E 603



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 204/454 (44%), Gaps = 10/454 (2%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+ T  + S    G+P  A  +  +L E G     + Y T++  L           +  +
Sbjct: 46  RTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDE 105

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +    + PD   FN V++A  + G++ E+     K+ + G++    T N  I+G    G+
Sbjct: 106 MLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGR 165

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            EE+V L++  S +  + P++ TYN L+R  C +  + EA   + +M   G  PD  TYN
Sbjct: 166 LEEAVALVE--SMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYN 223

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           TI   Y +     +A E++ +    G  P+  T   +I+G C EG ++ AL      +  
Sbjct: 224 TIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAK 283

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVD----EVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
            + P+LV++N L+KG      R G+     +V+  M E   +PD+ TY+ ++N     G 
Sbjct: 284 DLKPDLVVYNSLVKGLC----RQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGN 339

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +     + +D    G  PD   ++ +  GY +  + + A +L+  M   G  P+ + + +
Sbjct: 340 ISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNS 399

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +++G C  G      E F++M   G  PN  T+  L+  + +  Q   A  ++  M   G
Sbjct: 400 VLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDG 459

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           + P   +F  L       G    A  +  K+  K
Sbjct: 460 LVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEK 493



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 208/439 (47%), Gaps = 10/439 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++   +R   QEA  +  + I  G  P  VTY +L+  L  +        + ++ +   
Sbjct: 225 IIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +N+++      G +  A+    +M E G  P   TYN +I G    G   ++ 
Sbjct: 285 LKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAA 344

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +++    +G + P++ T+N ++  +C    +  A  ++ +M   G+ PD +TYN++   
Sbjct: 345 VVMNDAIVKGYL-PDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNG 403

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+A +  E   EM   G +PN  T  I+I  +CK  +++EA      M + G+ P+
Sbjct: 404 LCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPD 463

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + FN LI GF    D DG   +   + E   +    T++ ++ A+S+   M   ++IF 
Sbjct: 464 TISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFG 523

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G KPD + Y +L  G  +    ++A   L  M+  GF P++  F  +++    + 
Sbjct: 524 EMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNH 583

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL--QIMKAFGVHPQKST 495
            +  A+ +   M   GV P  +  +T++   S  ++   A +IL  ++MK    H    T
Sbjct: 584 RVSEAVAIIHIMVRMGVVP--EVVDTIL---STDKKEIAAPKILVEELMKKG--HISYPT 636

Query: 496 FLLLAEARRATGLTKEAKR 514
           + +L E  R   LT++A++
Sbjct: 637 YEVLHEGVRDNKLTRKARK 655



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/445 (23%), Positives = 203/445 (45%), Gaps = 8/445 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M++L+      +A  ++  ++  G  P   T+T  + +  I  R +    ++  + E G
Sbjct: 16  IMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERG 75

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            D   + +  V+      G+  +A   F +M    + P  +T+N ++      G   ES 
Sbjct: 76  CDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESG 135

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  + + G +  N  T N+ +R  C    + EA  ++  M A  + PDVVTYNT+   
Sbjct: 136 ALLAKVLKRG-MSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRG 193

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             ++ +  +A + +  M + G  P+  T   II GYCK   ++EA    +     G  P+
Sbjct: 194 LCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPD 253

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
            V +  LI G     D   V+  L L  E +   + PD++ Y++++      G +    +
Sbjct: 254 RVTYCSLINGLCAEGD---VERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQ 310

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + ++M + G  PD   Y+I+  G  +      A  ++   I  G+ P+V  F T+I G+C
Sbjct: 311 VMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYC 370

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
               +D A+++ ++M  +G++P+  T+ +++ G  +A +     E  + M   G  P   
Sbjct: 371 KRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAI 430

Query: 495 TFLLLAEARRATGLTKEAKRILSKI 519
           T+ +L E        +EA  ++ ++
Sbjct: 431 TYNILIENFCKINQLEEASGVIVRM 455



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 100/398 (25%), Positives = 193/398 (48%), Gaps = 8/398 (2%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G  P+   Y  ++ AL      +  H +  ++   G+ PD+      I +F  +G    A
Sbjct: 5   GCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVA 64

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           +     + E G       Y T+++G    G   ++  L D M R  +V P++ T+N ++ 
Sbjct: 65  LRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRR-DVFPDVATFNNVLH 123

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
           A C + +I E+  ++ K+   GM  +  T N       + G  ++A  ++  M+   + P
Sbjct: 124 ALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAP 182

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T   ++ G CK+ K++EA ++ R M   G  P+   +N +I G+ +   RD + E  
Sbjct: 183 DVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCK---RDMLQEAT 239

Query: 342 ALMKE--FR-VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            L+K+  F+   PD +TY +++N     G +++  E+F++     +KPD   Y+ L KG 
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            R+     A +++  M+E G HP++  +  +I+G C  G++  A  V +     G  P++
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            TF T++ GY +  +   A ++++ M  +G+ P   T+
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITY 397



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 123/285 (43%), Gaps = 1/285 (0%)

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M   G  P    YN I  A       DQA +V V M   GV P+ RT  + I  +C  G+
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
              ALR  R++ E G     + +  +++G            +   M    V PDV T++ 
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++A    G + +   +   + K G+  +    +I  +G       E+A  L+ +M ++ 
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAY 179

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P+VV + T++ G C D  +  A +   +M   G  P+  T+ T++ GY +      A 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           E+L+     G  P + T+  L     A G  + A  + ++ + K+
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKD 284


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/459 (27%), Positives = 218/459 (47%), Gaps = 10/459 (2%)

Query: 75  MTKLMNSLIERGKPQEAQAIF-NNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
            ++L+  L +  +  EA  I    + E G  P + +Y+ LL     +KR      ++S +
Sbjct: 131 FSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMM 190

Query: 134 EENG---MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++G     P+ + +  VI+   ++  ++ A   F  M + G+ P   TY  LI GY   
Sbjct: 191 ADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSI 250

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK +E V++L  MS  G ++P+   Y VL+   C     TEA N+   +   G+KP+V  
Sbjct: 251 GKWKEVVQMLQEMSTHG-LQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTI 309

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +   YA  G   +    +  M  NGV P+     I+   Y K+  I EA+     M+
Sbjct: 310 YGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMR 369

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL--MKEFRVNPDVITYSTIMNAWSTAGF 368
           +  + PN+V +  LI    ++   D  D VL    M +  + PD+  +S+++    T   
Sbjct: 370 QQRLSPNIVTYGALIDALCKLGRVD--DAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDK 427

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            +K +E+F ++   GI+ D   ++ L     RE    +A+ L+  M+  G  P+V+ + T
Sbjct: 428 WEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNT 487

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++ G C  G +D A ++ D +   G+ P+  T+ TL+ GY +AR+   A  + + M   G
Sbjct: 488 LVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKG 547

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRI-LSKIKNKERTN 526
           + P   T+  +      TG   EAK + LS I ++ + N
Sbjct: 548 LTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMN 586



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 109/484 (22%), Positives = 219/484 (45%), Gaps = 36/484 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++ L +      A+ +F ++I+ G +P+  TYT L+       ++  +  ++ 
Sbjct: 202 VVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQ 261

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G+ PD   +  +++   ++G   EA + F  +   G+ P  + Y  L+ GY   G
Sbjct: 262 EMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEG 321

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E    LDLM   G V P+   +N++  A+  +  I EA ++  KM    + P++VTY
Sbjct: 322 SLSEMHSFLDLMVGNG-VSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTY 380

Query: 252 NTIATAYAQNGEAD-----------------------------------QAEEVIVEMEH 276
             +  A  + G  D                                   +AEE+  E+  
Sbjct: 381 GALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLD 440

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G++ +      ++   C+EG++ EA R    M   GV P+++ +N L+ G       D 
Sbjct: 441 QGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDE 500

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             ++L ++    + PD +TY+T+++ +  A  +D    +F +M   G+ PD   Y+ +  
Sbjct: 501 AAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILH 560

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  +     +A+EL ++MI S    N+  +  II+G C +  +D A ++F  +C   +  
Sbjct: 561 GLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQL 620

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           ++ T   ++    +  +   A ++   + A+G+ P   T+ L+AE     G  +E   + 
Sbjct: 621 DIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELF 680

Query: 517 SKIK 520
           S ++
Sbjct: 681 SAME 684



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 113/472 (23%), Positives = 213/472 (45%), Gaps = 47/472 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQ----AIFNNLIEGGH---KPSLVTYTTLLAALTIQKRF 123
           +VR+  +L+ + + R +   A     ++FN +I        PS  TYT L+       R 
Sbjct: 50  SVRAFNQLLTA-VSRARCSSASELVVSLFNRMIRECSIKVAPSSFTYTILIGCFCRMGRL 108

Query: 124 NSIHSIMSQVEENGMDP-DSIFFNAVINAFSESGNMEEAMDTFWK-MKESGLTPTTSTYN 181
               +    + + G    D++ F+ ++    ++  ++EA D   + M E G TP   +Y+
Sbjct: 109 KHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLRRMPEFGCTPDVFSYS 168

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGN--------------------------------- 208
            L+KG+    + EE+++LL +M+ +G+                                 
Sbjct: 169 ILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHM 228

Query: 209 ----VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
               V+PN  TY  L+  + +     E   ++ +M+  G++PD   Y  +     +NG  
Sbjct: 229 IDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRC 288

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A  +   +   G++PN    GI++ GY  EG + E   F   M   GV P+  IFN++
Sbjct: 289 TEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIM 348

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
              + +    D    +   M++ R++P+++TY  +++A    G +D     F+ M   G+
Sbjct: 349 FCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGM 408

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            PD   +S L  G     + EKAEEL   +++ G   + V F T++   C +G +  A  
Sbjct: 409 TPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQR 468

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           + D M   GV P++ ++ TL+ G+    +   A ++L ++ + G+ P K T+
Sbjct: 469 LIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTY 520



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 194/422 (45%), Gaps = 34/422 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + G+  EA+ IF+++I  G KP++  Y  LL     +   + +HS +  +  NG
Sbjct: 278 LLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNG 337

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   FN +  A+++   ++EAM  F KM++  L+P   TY  LI      G+ +++V
Sbjct: 338 VSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAV 397

Query: 198 KLLDLMSREG----------------------------------NVKPNLRTYNVLVRAW 223
              + M  EG                                   ++ +   +N L+   
Sbjct: 398 LKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNL 457

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C E  + EA  ++  M   G++PDV++YNT+   +   G  D+A +++  +   G++P+ 
Sbjct: 458 CREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDK 517

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T   ++ GYCK  +I +A    R M   G+ P++V +N ++ G  +        E+   
Sbjct: 518 VTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLS 577

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M   R   ++ TY+ I+N      F+D+  ++F  +    ++ D    +I+    ++   
Sbjct: 578 MINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGR 637

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            E A +L  T+   G  P+V  +  I      +GS++   E+F  M E+G +PN +    
Sbjct: 638 KEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNA 697

Query: 464 LM 465
           L+
Sbjct: 698 LV 699



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/403 (25%), Positives = 186/403 (46%), Gaps = 36/403 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++L + G+  +A   FN +I+ G  P +  +++L+  L    ++     +  +V + G
Sbjct: 383 LIDALCKLGRVDDAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQG 442

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D++FFN ++      G + EA      M   G+ P   +YNTL+ G+ + G+ +E+ 
Sbjct: 443 IRLDTVFFNTLMCNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAA 502

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLLD++   G +KP+  TYN L+  +C  + I +A+++  +M   G+ PDVVTYNTI   
Sbjct: 503 KLLDVIVSIG-LKPDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHG 561

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             Q G   +A+E+ + M ++  Q N  T  III+G CK   + EA               
Sbjct: 562 LFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNNFVDEAF-------------- 607

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
                   K F  +  +D             +  D+ T + ++ A    G  +   ++F 
Sbjct: 608 --------KMFHSLCSKD-------------LQLDIFTANIMIGALLKGGRKEDAMDLFA 646

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +   G+ PD   Y ++A+  ++E   E+ +EL   M E+G  PN  +   ++      G
Sbjct: 647 TISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRG 706

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
            ++RA     K+ E   S    T   L+  YS       A+ +
Sbjct: 707 DINRAGAYLSKLDEKNFSLEASTTSMLISIYSRGEYQQLAKSL 749



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/339 (22%), Positives = 151/339 (44%), Gaps = 10/339 (2%)

Query: 195 ESVKLLDLM---SREGNVKPNLRTYNVLVRAWCNEKN--ITEAWNVMHKMAASGMKPDVV 249
           +++KL D M   +R  +V+   +    + RA C+  +  +   +N M +  +  + P   
Sbjct: 34  DALKLFDEMLTHARPASVRAFNQLLTAVSRARCSSASELVVSLFNRMIRECSIKVAPSSF 93

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC-GIIISGYCKEGKIKEALR-FAR 307
           TY  +   + + G           +   G + N       ++ G C   ++ EA     R
Sbjct: 94  TYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEATDILLR 153

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE---FRVNPDVITYSTIMNAWS 364
            M E+G  P++  +++L+KGF      +   E+L++M +       P+V+TY+T+++   
Sbjct: 154 RMPEFGCTPDVFSYSILLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLC 213

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
            A  +D+ K +F  M   G++P+ H Y+ L  GY+   + ++  ++L  M   G  P+  
Sbjct: 214 KAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCY 273

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           I+  ++   C +G    A  +FD +   G+ PN+  +  L+ GY+           L +M
Sbjct: 274 IYAVLLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLM 333

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
              GV P    F ++  A     +  EA  I  K++ + 
Sbjct: 334 VGNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQR 372



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 111/240 (46%), Gaps = 1/240 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L++     G+  EA  + + ++  G KP  VTY TLL      +R +  +S+  
Sbjct: 482 VISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAYSLFR 541

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD + +N +++   ++G   EA + +  M  S       TYN +I G     
Sbjct: 542 EMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGLCKNN 601

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+ K+   +  + +++ ++ T N+++ A        +A ++   ++A G+ PDV TY
Sbjct: 602 FVDEAFKMFHSLCSK-DLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDVETY 660

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             IA    + G  ++ +E+   ME NG  PN R    ++      G I  A  +   + E
Sbjct: 661 CLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSKLDE 720



 Score = 38.9 bits (89), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 24/122 (19%), Positives = 53/122 (43%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +N  +   + +   ++N L +     EA  +F++L     +  + T   ++ AL    R 
Sbjct: 579 INSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRK 638

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                + + +   G+ PD   +  +     + G++EE  + F  M+E+G  P +   N L
Sbjct: 639 EDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNAL 698

Query: 184 IK 185
           ++
Sbjct: 699 VR 700


>gi|168022838|ref|XP_001763946.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162684951|gb|EDQ71350.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 727

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 221/428 (51%), Gaps = 6/428 (1%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL---AALTIQKR-FNSIHSIMS 131
           + ++++  + G  + A+A+  ++ E G + +L  Y  L+   A   I+ +  N  H + +
Sbjct: 232 SSIIHAYCKAGNMERAEALVADMEEQGLEATLGLYNILMDGYARCHIEAQCLNVFHKLKA 291

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++  G+ P ++ +  +IN +++ G M +A++   +MK  G+T   +TY+ L+ GY   G
Sbjct: 292 RID-TGLSPTAVTYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLG 350

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               +  + + MS E  ++P+  TYN+L++A+C  + +T A  ++ +M   G  P + TY
Sbjct: 351 DFANAFSVFEDMS-EAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTY 409

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            TI   + + G+   A + + EM+  G +PN  T  +I+    + G+I  A      M+ 
Sbjct: 410 ITIIDGFMKTGDVRMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMEL 469

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV PN   +  L++GF  I +     + L  + E    P +I+Y++++ A   AG M  
Sbjct: 470 AGVQPNFRSYTTLMQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQN 529

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + ++M  AG+  + + ++ L  G+ +  +  +A  ++  M + GF P++  +T+ ++
Sbjct: 530 AIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVN 589

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             C  G M +A E  ++M +  + PNL+T+  L+ G++    P +A      MKA G+ P
Sbjct: 590 ACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAGLIP 649

Query: 492 QKSTFLLL 499
            K  +  +
Sbjct: 650 DKPLYYCI 657



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/489 (24%), Positives = 215/489 (43%), Gaps = 39/489 (7%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R    L++   +RG  + A+  F  +   G   S+  Y  L+ A  + +      S + +
Sbjct: 124 RDYALLIHYYGKRGDKRGARVTFEKMRAAGIDSSVHAYNNLIRAYIMAQNLQGAVSCVEE 183

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +E  G+ P++  F+A+I+ +  SGN+E A   F +          + Y+++I  Y  AG 
Sbjct: 184 MEIEGIFPNAATFSAIISGYGSSGNVEAAEKWFQRSVSENWNHNVAIYSSIIHAYCKAGN 243

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA---SGMKPDVV 249
            E +  L+  M  +G ++  L  YN+L+  +       +  NV HK+ A   +G+ P  V
Sbjct: 244 MERAEALVADMEEQG-LEATLGLYNILMDGYARCHIEAQCLNVFHKLKARIDTGLSPTAV 302

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +   Y + G+  +A E   EM+  G+  N  T  +++ GY + G    A      M
Sbjct: 303 TYGCLINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDM 362

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            E G+ P+ V +N+L+K F +        ++L  MK    +P + TY TI++ +   G +
Sbjct: 363 SEAGIEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDV 422

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
               +   +M  AG +P+A  Y+++    V+  + ++A  ++  M  +G  PN   +TT+
Sbjct: 423 RMAYKTVSEMKLAGCRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTL 482

Query: 430 ISGW-----------------------------------CSDGSMDRAIEVFDKMCEHGV 454
           + G+                                   C  G M  AI V ++M   GV
Sbjct: 483 MQGFASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGV 542

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
             N   F TL+ G+++    W A  I+Q M+  G  P   ++     A    G  ++A  
Sbjct: 543 PMNNYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATE 602

Query: 515 ILSKIKNKE 523
            + ++K ++
Sbjct: 603 TIEEMKQQD 611



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 182/389 (46%), Gaps = 7/389 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   + GK  +A      +   G   +  TY+ L+        F +  S+   + E G
Sbjct: 307 LINLYTKLGKMMKALEFCKEMKAQGITLNRNTYSMLVDGYVQLGDFANAFSVFEDMSEAG 366

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++PD + +N ++ AF +S  M  A+    +MK  G +PT  TY T+I G+   G    + 
Sbjct: 367 IEPDWVTYNILLKAFCKSRQMTRAIQLLGRMKTRGCSPTIQTYITIIDGFMKTGDVRMAY 426

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K +  M   G  +PN  TYNV++        I  A +V+ +M  +G++P+  +Y T+   
Sbjct: 427 KTVSEMKLAG-CRPNATTYNVIMHNLVQLGQIDRAASVIDEMELAGVQPNFRSYTTLMQG 485

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           +A  GE   A + +  +     +P   +   ++   CK G+++ A+     M   GV  N
Sbjct: 486 FASIGEIGLAFKCLKRVNEITQKPPIISYASLLKACCKAGRMQNAIAVTEEMAFAGVPMN 545

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             IFN L+ G+ +  D      ++  M++    PD+ +Y++ +NA   AG M K  E  +
Sbjct: 546 NYIFNTLLDGWAQRGDMWEAYGIMQKMRQEGFTPDIHSYTSFVNACCKAGDMQKATETIE 605

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M +  ++P+   Y+IL  G+     PEKA      M  +G  P+  ++  I++   S  
Sbjct: 606 EMKQQDLQPNLQTYTILIHGWTSVSHPEKALICYDEMKAAGLIPDKPLYYCIVTSLLSKA 665

Query: 438 SMDR------AIEVFDKMCEHGVSPNLKT 460
           ++ R       ++V  +M + G+  +L T
Sbjct: 666 AIARETVRNGVLQVTSEMVDQGMCIDLAT 694



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 81/183 (44%), Gaps = 7/183 (3%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L+ +  + G+ Q A A+   +   G   +   + TLL     +      + IM ++
Sbjct: 513 SYASLLKACCKAGRMQNAIAVTEEMAFAGVPMNNYIFNTLLDGWAQRGDMWEAYGIMQKM 572

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            + G  PD   + + +NA  ++G+M++A +T  +MK+  L P   TY  LI G+     P
Sbjct: 573 RQEGFTPDIHSYTSFVNACCKAGDMQKATETIEEMKQQDLQPNLQTYTILIHGWTSVSHP 632

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE------AWNVMHKMAASGMKPD 247
           E+++   D M   G + P+   Y  +V +  ++  I           V  +M   GM  D
Sbjct: 633 EKALICYDEMKAAGLI-PDKPLYYCIVTSLLSKAAIARETVRNGVLQVTSEMVDQGMCID 691

Query: 248 VVT 250
           + T
Sbjct: 692 LAT 694


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 204/425 (48%), Gaps = 18/425 (4%)

Query: 96  NNLIEGGHKP-SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           NN+  G   P  + ++  L+       +     S   ++ + G  P  + FN +++    
Sbjct: 3   NNIKHGLQIPCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCV 62

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
              + EA+D F +M +    P   T+ TL+ G    G+  E+V LLD M  +G ++PN  
Sbjct: 63  EDRVSEALDLFHQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDG-LQPNQI 117

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMA-ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
           TY  +V   C   +   A N++ KM   S +KPDVV Y+ I     ++G    A+ + +E
Sbjct: 118 TYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIE 177

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M+  G+ P+  T   +I+G+C  GK  EA R  + M    + P++V F+ LI   V+  D
Sbjct: 178 MQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGD 237

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA----------- 382
            +   ++L  M    V P+V+T +T+++    +G +    E+F  M K+           
Sbjct: 238 LNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFN 297

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G++PD   Y+IL  G + E +  +AEEL   M   G  P+ V ++++I+G C    +D A
Sbjct: 298 GVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEA 357

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            ++FD M     SPN+ TF TL+ GY +A       E+   M   G+     T++ L   
Sbjct: 358 TQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRG 417

Query: 503 RRATG 507
            R  G
Sbjct: 418 FRKVG 422



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 209/439 (47%), Gaps = 21/439 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   L+       K   A + F  L + G  P+LVT+ TLL  L ++ R +    +  
Sbjct: 15  IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ +    P+ + F  ++N     G + EA+    +M E GL P   TY T++ G    G
Sbjct: 75  QMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++ LL  M    ++KP++  Y+ ++     +   T+A N+  +M   G+ PD+VTY
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +   +  +G+  +A+ ++ EM    + P+  T   +I+   KEG +  A    + M  
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR--------------VNPDVITYS 357
            GV PN+V  N L+ G     D   + + L + K  +              V PDV TY+
Sbjct: 251 SGVCPNVVTCNTLLDGLC---DSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++     G   + +E++++M   GI PD   YS +  G  ++   ++A ++  +M   
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
            F PN+V F T+I+G+C  G +D  +E+F +M   G+  N  T+ TL+ G+ +      +
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427

Query: 478 EEILQIMKAFGVHPQKSTF 496
            +I Q M + GV+P   T 
Sbjct: 428 LDIFQEMISSGVYPDTITI 446



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 212/422 (50%), Gaps = 23/422 (5%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L++ L    +  EA  +F+ +     KP++VT+TTL+  L  + R     +++
Sbjct: 49  TLVTFNTLLHGLCVEDRVSEALDLFHQMC----KPNVVTFTTLMNGLCREGRVVEAVALL 104

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE-SGLTPTTSTYNTLIKGYGI 189
            ++ E+G+ P+ I +  +++   + G+   A++   KM+E S + P    Y+ +I G   
Sbjct: 105 DRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWK 164

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+  ++  L   M  +G + P++ TY+ ++  +C+    +EA  ++ +M    + PDVV
Sbjct: 165 DGRHTDAQNLFIEMQDKG-IFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVV 223

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           T++ +  A  + G+ + A++++ EM  +GV PN  TC  ++ G C  GK+K+AL   + M
Sbjct: 224 TFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAM 283

Query: 310 KEY-----------GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           ++            GV P++  +N+LI G +        +E+   M    + PD +TYS+
Sbjct: 284 QKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSS 343

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++N       +D+  ++FD MG     P+   ++ L  GY +    +   EL   M   G
Sbjct: 344 MINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRG 403

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
              N + + T+I G+   G+++ ++++F +M   GV P+  T   ++ G       W  E
Sbjct: 404 IVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGL------WSKE 457

Query: 479 EI 480
           E+
Sbjct: 458 EL 459



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 210/391 (53%), Gaps = 15/391 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T LMN L   G+  EA A+ + ++E G +P+ +TY T++  +       S  +++ 
Sbjct: 81  VVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 140

Query: 132 QVEE-NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           ++EE + + PD + ++A+I+   + G   +A + F +M++ G+ P   TY+ +I G+  +
Sbjct: 141 KMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSS 200

Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           GK  E+ +LL +++ R+  + P++ T++ L+ A   E ++  A +++ +M +SG+ P+VV
Sbjct: 201 GKWSEAQRLLQEMLVRK--ISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVV 258

Query: 250 TYNTIATAYAQNGEADQAEEVIVEME-----------HNGVQPNGRTCGIIISGYCKEGK 298
           T NT+      +G+   A E+   M+            NGV+P+ +T  I+ISG   EGK
Sbjct: 259 TCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGK 318

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
             EA      M   G+ P+ V ++ +I G  +    D   ++   M     +P+++T++T
Sbjct: 319 FLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNT 378

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++  +  AG +D   E+F +MG+ GI  +A  Y  L +G+ +      + ++   MI SG
Sbjct: 379 LITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSG 438

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            +P+ +    +++G  S   + +A+ + +++
Sbjct: 439 VYPDTITIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/480 (23%), Positives = 215/480 (44%), Gaps = 48/480 (10%)

Query: 140 PDSIF-FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           P  I+ FN +I  F     +  A+ TF K+ + G  PT  T+NTL+ G  +  +  E++ 
Sbjct: 12  PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           L   M      KPN+ T+  L+   C E  + EA  ++ +M   G++P+ +TY TI    
Sbjct: 72  LFHQMC-----KPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGM 126

Query: 259 AQNGEADQAEEVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            + G+   A  ++ +ME  + ++P+      II G  K+G+  +A      M++ G+ P+
Sbjct: 127 CKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPD 186

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V ++ +I GF           +L  M   +++PDV+T+S ++NA    G ++  +++  
Sbjct: 187 IVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQ 246

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES-----------GFHPNVVIF 426
           +M  +G+ P+    + L  G     + + A E+   M +S           G  P+V  +
Sbjct: 247 EMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTY 306

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
             +ISG  ++G    A E++++M   G+ P+  T+ +++ G  +  +   A ++   M +
Sbjct: 307 NILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGS 366

Query: 487 FGVHPQKSTF------------------LLLAEARRATGLTKEAKRILSKIKNKERTNEM 528
               P   TF                  L     RR  G+   A   ++ I+   +   +
Sbjct: 367 KSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRR--GIVANAITYITLIRGFRKVGNI 424

Query: 529 EAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLE 588
               DI        + +  ++  YP+ + I N+++     S   LKK   +L +   S++
Sbjct: 425 NGSLDI--------FQEMISSGVYPDTITIRNMLTG--LWSKEELKKALAMLEELQMSMD 474


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/390 (28%), Positives = 209/390 (53%), Gaps = 4/390 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ + ++ G+   A   F+   + G + S ++   +L +L  + R   + S+  ++    
Sbjct: 165 LVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVVESVYKEMIRRR 224

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  + + F+ VIN   + G  ++A D    MK  G +P+  TYNT+I GY  AGK  ++ 
Sbjct: 225 IGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKAD 284

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M  +  + PN  T+N+L+  +C ++N+T A  V  +M   G++P+VVTYN++   
Sbjct: 285 ALLKEMVAK-RIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLING 343

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
              NG+ D+A  +  +M   G++PN  T   +I+G+CK+  +KEA      + + G+ PN
Sbjct: 344 LCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPN 403

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ FN LI  + +    D    + ++M +  V P+V TY+ ++  +   G + + +++  
Sbjct: 404 VITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAK 463

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL--MTMIE-SGFHPNVVIFTTIISGWC 434
           +M   G+K D   Y+IL     ++ E  KA  LL  MT++E  G   N+V +  +I G+C
Sbjct: 464 EMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFC 523

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           + G ++ A  + ++M E G+ PN  T++ L
Sbjct: 524 NKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 159/336 (47%), Gaps = 39/336 (11%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++N L + GK Q+A  +  ++   G  PS++TY T++       +     +++ 
Sbjct: 229 VVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLK 288

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++    + P+ I FN +I+ F    N+  A   F +M+  GL P   TYN+LI G    G
Sbjct: 289 EMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNG 348

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E++ L D MS  G +KPN+ TYN L+  +C +K + EA  ++  +   G+ P+V+T+
Sbjct: 349 KLDEALGLQDKMSGMG-LKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITF 407

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+  AY + G  D A  +   M   GV PN  T   +I G+C+EG +KEA + A+ M+ 
Sbjct: 408 NTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEG 467

Query: 312 YGV--------------------------------------HPNLVIFNLLIKGFVEIMD 333
            G+                                        N+V +N+LIKGF     
Sbjct: 468 NGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGK 527

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            +  + +L  M E  + P+  TY  + +     GF+
Sbjct: 528 LEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 563



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 198/415 (47%), Gaps = 19/415 (4%)

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK 169
           +  LL  L   K +N I +++    +N    +S  F+++    S  G+        W   
Sbjct: 110 FCRLLHLLANAKNYNKIRALLDSFAKNAHYSNSTIFHSL----SVLGS--------WGCA 157

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
            S +       + L+  Y   G+ + +++  D     G  + +  + N ++ +   E  I
Sbjct: 158 NSIIV------DMLVWAYVKNGEMDLALEGFDRAGDYG-FRLSALSCNPMLVSLVKEGRI 210

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
               +V  +M    +  +VVT++ +     + G+  +A +V+ +M+  G  P+  T   I
Sbjct: 211 GVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTI 270

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           I GYCK GK+ +A    + M    +HPN + FN+LI GF    +     +V   M+   +
Sbjct: 271 IDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGL 330

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            P+V+TY++++N   + G +D+   + D M   G+KP+   Y+ L  G+ +++  ++A E
Sbjct: 331 QPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEARE 390

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +L  + + G  PNV+ F T+I  +   G MD A  +   M + GV PN+ T+  L+ G+ 
Sbjct: 391 MLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFC 450

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
                  A ++ + M+  G+     T+ +L +A    G T++A R+L ++   E+
Sbjct: 451 REGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEK 505



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 87/333 (26%), Positives = 160/333 (48%), Gaps = 13/333 (3%)

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN---VLVRAWCNEKNITEAWNVMHKMAA 241
           K +G     E+  +LL L++       N + YN    L+ ++    + + +  + H ++ 
Sbjct: 99  KEFGAIHNVEQFCRLLHLLA-------NAKNYNKIRALLDSFAKNAHYSNS-TIFHSLSV 150

Query: 242 SGM--KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
            G     + +  + +  AY +NGE D A E        G + +  +C  ++    KEG+I
Sbjct: 151 LGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRI 210

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
                  + M    +  N+V F+++I G  ++       +V+  MK +  +P VITY+TI
Sbjct: 211 GVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTI 270

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++ +  AG M K   +  +M    I P+   ++IL  G+ R++    A+++   M   G 
Sbjct: 271 IDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGL 330

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            PNVV + ++I+G CS+G +D A+ + DKM   G+ PN+ T+  L+ G+ + +    A E
Sbjct: 331 QPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEARE 390

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           +L  +   G+ P   TF  L +A    G   +A
Sbjct: 391 MLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDA 423



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 99/218 (45%), Gaps = 23/218 (10%)

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP----DVITYS-TI 359
           F  T KE+G   N+  F  L+     + +    +++ AL+  F  N       I +S ++
Sbjct: 94  FKWTQKEFGAIHNVEQFCRLLH---LLANAKNYNKIRALLDSFAKNAHYSNSTIFHSLSV 150

Query: 360 MNAWSTA---------------GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
           + +W  A               G MD   E FD  G  G +  A + + +    V+E   
Sbjct: 151 LGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRI 210

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
              E +   MI      NVV F  +I+G C  G   +A +V + M   G SP++ T+ T+
Sbjct: 211 GVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTI 270

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           + GY +A + ++A+ +L+ M A  +HP + TF +L + 
Sbjct: 271 IDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDG 308


>gi|224056220|ref|XP_002298762.1| predicted protein [Populus trichocarpa]
 gi|222846020|gb|EEE83567.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 221/445 (49%), Gaps = 5/445 (1%)

Query: 80  NSLI---ERGK-PQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           N+LI    RG   +EA A+F ++   G  P  VTY  LL      +R      ++ ++E 
Sbjct: 108 NTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREMEV 167

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           NG  P  + +N++I+A++  G ++EAM+   +M E G+     TY TL+ G+  AGK E 
Sbjct: 168 NGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDES 227

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++++   M R    KPN+ T+N L++   N     E   V  ++  S   PD+VT+NT+ 
Sbjct: 228 AMRVFAEM-RAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLL 286

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + QNG   +   V  EM+  G  P   T   +IS Y + G   +A+   + M E G+ 
Sbjct: 287 AVFGQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGIT 346

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+L  +N ++         +  +++ A MK+ R  P+ +TY ++++A++    + +   +
Sbjct: 347 PDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLAL 406

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            +++    I+P A     L     +     +AE   + +   GF P++     ++S +  
Sbjct: 407 AEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGR 466

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
                +  E+ + M E G +P+L T+ +LM+ +S +    R+EE+L+ + A G+ P   +
Sbjct: 467 RQMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTIS 526

Query: 496 FLLLAEARRATGLTKEAKRILSKIK 520
           +  +  A    G  KEA RI S+++
Sbjct: 527 YNTVIFAYCRNGRMKEASRIFSEMR 551



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 110/430 (25%), Positives = 208/430 (48%), Gaps = 9/430 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   L+++    G  +EA  + N ++EGG    + TYTTLL+      +  S   + 
Sbjct: 173 SIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVF 232

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++   G  P+   FNA+I      G   E M  F ++K S   P   T+NTL+  +G  
Sbjct: 233 AEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQN 292

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E   +   M R G V P   TYN L+ A+    +  +A ++  +M  +G+ PD+ T
Sbjct: 293 GMDSEVSGVFKEMKRAGFV-PERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLST 351

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +  A A+ G  +Q+E++  EM+    +PN  T   ++  Y    +I   L  A  + 
Sbjct: 352 YNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEIC 411

Query: 311 EYGVHPNLVIFN--LLIKGFVEIMDRDGVDEVLALMKEFR--VNPDVITYSTIMNAWSTA 366
              + P+ V+    +L+    +++    V+  +A ++  R   +PD+ T + +++ +   
Sbjct: 412 SGVIEPHAVLLKTLVLVNSKCDLL----VEAEVAFLELKRKGFSPDLSTLNAMLSIYGRR 467

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
               K  EI + M ++G  P    Y+ L   + R +  E++EE+L  ++  G  P+ + +
Sbjct: 468 QMFTKTNEILNFMNESGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISY 527

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            T+I  +C +G M  A  +F +M E G+ P++ T+ T +  Y+       A ++++ M  
Sbjct: 528 NTVIFAYCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIK 587

Query: 487 FGVHPQKSTF 496
            G  P ++T+
Sbjct: 588 HGCKPNQNTY 597



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/430 (26%), Positives = 209/430 (48%), Gaps = 10/430 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           V + T L+ + +  G+ +EA  +F  + E G KP+L+TY  +L     +   +N I  + 
Sbjct: 33  VYAYTSLITACVSNGRYREAVMVFKKMEEEGCKPTLITYNVILNVYGKMGMPWNKIKGLF 92

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++  G+ PD   +N +I         EEA   F  MK  G  P   TYN L+  YG +
Sbjct: 93  EGMKNAGVLPDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDVYGKS 152

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + +E++++L  M   G   P++ TYN L+ A+  +  + EA  + ++M   G+  DV T
Sbjct: 153 RRTKEAMEVLREMEVNG-CSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLDVFT 211

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+ + + + G+ + A  V  EM   G +PN  T   +I  +   GK  E ++    +K
Sbjct: 212 YTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIK 271

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEFR---VNPDVITYSTIMNAWSTA 366
                P++V +N L+  F     ++G+D EV  + KE +     P+  TY+T+++A+S  
Sbjct: 272 NSCCVPDIVTWNTLLAVF----GQNGMDSEVSGVFKEMKRAGFVPERDTYNTLISAYSRC 327

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G  D+  +I+  M +AGI PD   Y+ +     R    E++E++   M +    PN + +
Sbjct: 328 GSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWEQSEKIFAEMKDGRCKPNELTY 387

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            +++  + +   + R + + +++C   + P+    +TL+   S+      AE     +K 
Sbjct: 388 CSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKR 447

Query: 487 FGVHPQKSTF 496
            G  P  ST 
Sbjct: 448 KGFSPDLSTL 457



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 215/452 (47%), Gaps = 14/452 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L + GK   A ++ N+L + G    +  YT+L+ A     R+     +  ++EE G
Sbjct: 4   IISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63

Query: 138 MDPDSIFFNAVINAFSESGN-MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
             P  I +N ++N + + G    +    F  MK +G+ P   TYNTLI         EE+
Sbjct: 64  CKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHEEA 123

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
             +   M   G V P+  TYN L+  +   +   EA  V+ +M  +G  P +VTYN++ +
Sbjct: 124 AAVFKDMKSMGFV-PDKVTYNALLDVYGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLIS 182

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           AYA++G   +A E+  +M   G+  +  T   ++SG+ + GK + A+R    M+  G  P
Sbjct: 183 AYARDGLLKEAMELKNQMVEGGINLDVFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKP 242

Query: 317 NLVIFNLLIK------GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           N+  FN LIK       F E+M      +V   +K     PD++T++T++  +   G   
Sbjct: 243 NICTFNALIKMHGNRGKFAEMM------KVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDS 296

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +F +M +AG  P+   Y+ L   Y R    ++A ++   M+E+G  P++  +  ++
Sbjct: 297 EVSGVFKEMKRAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVL 356

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +     G  +++ ++F +M +    PN  T+ +L+  Y+  ++  R   + + + +  + 
Sbjct: 357 AALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIE 416

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P       L        L  EA+    ++K K
Sbjct: 417 PHAVLLKTLVLVNSKCDLLVEAEVAFLELKRK 448



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 187/387 (48%), Gaps = 13/387 (3%)

Query: 79  MNSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
            N+LI+    RGK  E   +F  +      P +VT+ TLLA        + +  +  +++
Sbjct: 247 FNALIKMHGNRGKFAEMMKVFEEIKNSCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMK 306

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G  P+   +N +I+A+S  G+ ++AMD + +M E+G+TP  STYN ++      G  E
Sbjct: 307 RAGFVPERDTYNTLISAYSRCGSFDQAMDIYKRMLEAGITPDLSTYNAVLAALARGGLWE 366

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           +S K+   M ++G  KPN  TY  L+ A+ N K I     +  ++ +  ++P  V   T+
Sbjct: 367 QSEKIFAEM-KDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTL 425

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE---GKIKEALRFARTMKE 311
               ++     +AE   +E++  G  P+  T   ++S Y +     K  E L F   M E
Sbjct: 426 VLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTNEILNF---MNE 482

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P+L  +N L+       + +  +EVL  +    + PD I+Y+T++ A+   G M +
Sbjct: 483 SGFTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFAYCRNGRMKE 542

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              IF +M ++G+ PD   Y+     Y  +   E A +++  MI+ G  PN   + +++ 
Sbjct: 543 ASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPNQNTYNSVVD 602

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           G+C     D AI     +  H + P++
Sbjct: 603 GYCKHNHRDDAIMFISSL--HELDPHI 627



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 140/276 (50%), Gaps = 3/276 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ +L   G  ++++ IF  + +G  KP+ +TY +LL A    K    + ++  ++    
Sbjct: 355 VLAALARGGLWEQSEKIFAEMKDGRCKPNELTYCSLLHAYANGKEIGRMLALAEEICSGV 414

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++P ++    ++   S+   + EA   F ++K  G +P  ST N ++  YG      ++ 
Sbjct: 415 IEPHAVLLKTLVLVNSKCDLLVEAEVAFLELKRKGFSPDLSTLNAMLSIYGRRQMFTKTN 474

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L+ M+  G   P+L TYN L+      +N   +  V+ ++ A G+KPD ++YNT+  A
Sbjct: 475 EILNFMNESG-FTPSLATYNSLMYMHSRSENFERSEEVLKEILAKGIKPDTISYNTVIFA 533

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y +NG   +A  +  EM  +G+ P+  T    ++ Y  +   ++A+   R M ++G  PN
Sbjct: 534 YCRNGRMKEASRIFSEMRESGLVPDVITYNTFVASYAADSMFEDAIDVVRYMIKHGCKPN 593

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
              +N ++ G+ +   RD  D ++ +     ++P +
Sbjct: 594 QNTYNSVVDGYCKHNHRD--DAIMFISSLHELDPHI 627



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 77/304 (25%), Positives = 132/304 (43%), Gaps = 34/304 (11%)

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           V++     E  ++ A ++++ +   G   DV  Y ++ TA   NG   +A  V  +ME  
Sbjct: 3   VIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G +P   T  +I++ Y K G                           IKG  E M   GV
Sbjct: 63  GCKPTLITYNVILNVYGKMGMPWNK----------------------IKGLFEGMKNAGV 100

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
                        PD  TY+T++         ++   +F DM   G  PD   Y+ L   
Sbjct: 101 L------------PDEYTYNTLITCCRRGSLHEEAAAVFKDMKSMGFVPDKVTYNALLDV 148

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           Y + +  ++A E+L  M  +G  P++V + ++IS +  DG +  A+E+ ++M E G++ +
Sbjct: 149 YGKSRRTKEAMEVLREMEVNGCSPSIVTYNSLISAYARDGLLKEAMELKNQMVEGGINLD 208

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + T+ TL+ G+  A +   A  +   M+A G  P   TF  L +     G   E  ++  
Sbjct: 209 VFTYTTLLSGFVRAGKDESAMRVFAEMRAAGCKPNICTFNALIKMHGNRGKFAEMMKVFE 268

Query: 518 KIKN 521
           +IKN
Sbjct: 269 EIKN 272



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 1/165 (0%)

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           + I++     G +     + +D+ K G   D +AY+ L    V      +A  +   M E
Sbjct: 2   AVIISMLGKEGKVSVAASLLNDLHKDGFGLDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIE-VFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
            G  P ++ +  I++ +   G     I+ +F+ M   GV P+  T+ TL+          
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKIKGLFEGMKNAGVLPDEYTYNTLITCCRRGSLHE 121

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            A  + + MK+ G  P K T+  L +    +  TKEA  +L +++
Sbjct: 122 EAAAVFKDMKSMGFVPDKVTYNALLDVYGKSRRTKEAMEVLREME 166


>gi|224113413|ref|XP_002316488.1| predicted protein [Populus trichocarpa]
 gi|222865528|gb|EEF02659.1| predicted protein [Populus trichocarpa]
          Length = 941

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 229/492 (46%), Gaps = 39/492 (7%)

Query: 53  DSQPQTHCSFCMNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYT 111
           D +    C   MN+E    ++ + + ++    + G  + A   F    E     +   Y 
Sbjct: 344 DMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKKAKERHTNLNAYIYG 403

Query: 112 TLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES 171
            ++ A       +   +++ ++EE G+D     ++ +++ ++   N E+ +  F ++KE 
Sbjct: 404 NIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTMMDGYTMIRNEEKCLIVFKRLKEC 463

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE 231
           G  P+  TY  LI  Y   GK  +++++  +M   G +K N++TY++L+  +   K+ T 
Sbjct: 464 GFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVG-IKHNMKTYSMLINGFLKLKDWTN 522

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           A+ V   +   G+KPDVV YN I  A+   G  D+A  ++ EM+    +P  RT   II 
Sbjct: 523 AFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIH 582

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
           G+ + G+++ AL     M+  G  P +  FN L+ G VE    +   E+L  M    V+P
Sbjct: 583 GFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSP 642

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA----------------------- 388
           D  TY+TIM+ ++  G   K  E F  M   G++ D                        
Sbjct: 643 DEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVT 702

Query: 389 ------------HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
                         Y+IL  G+ R  +  +A +L+  M + G  P++  +T+ I+  C  
Sbjct: 703 REMNAQKIPRNTFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKA 762

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G M RA +  ++M   GV PN+KT+ TL+ G++ A  P +A    + +K  G+ P K+ +
Sbjct: 763 GDMLRATKTMEEMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVY 822

Query: 497 --LLLAEARRAT 506
             L+ +   RAT
Sbjct: 823 HCLMTSLLSRAT 834



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 187/365 (51%), Gaps = 1/365 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   + GK  +A  +   +   G K ++ TY+ L+      K + +  ++   V ++G
Sbjct: 475 LINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDG 534

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +N +I AF   GNM+ A+    +M++    PT+ T+  +I G+  AG+   ++
Sbjct: 535 LKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKERCRPTSRTFMPIIHGFARAGEMRRAL 594

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++ D+M R G + P + T+N LV     ++ + +A  ++ +MA +G+ PD  TY TI   
Sbjct: 595 EIFDMMRRSGCI-PTVHTFNALVLGLVEKRKMEKAVEILDEMALAGVSPDEHTYTTIMHG 653

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           YA  G+  +A E   +M + G+Q +  T   ++   CK G+++ AL   R M    +  N
Sbjct: 654 YAALGDTGKAFEYFTKMRNEGLQLDVFTYEALLKACCKSGRMQSALAVTREMNAQKIPRN 713

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             ++N+LI G+    D     +++  M +  V PD+ TY++ +NA   AG M +  +  +
Sbjct: 714 TFVYNILIDGWARRGDIWEAADLMQQMNQEGVQPDIHTYTSFINACCKAGDMLRATKTME 773

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M  AG+KP+   Y+ L  G+     PEKA      +  +G  P+  ++  +++   S  
Sbjct: 774 EMEAAGVKPNVKTYTTLIHGWANASLPEKALSCFEELKLAGLKPDKAVYHCLMTSLLSRA 833

Query: 438 SMDRA 442
           ++  A
Sbjct: 834 TVAEA 838



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 200/418 (47%), Gaps = 3/418 (0%)

Query: 50  KPTDSQPQTHCSFCMNKESCR--TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSL 107
           K  D+QP+   +     E  +  + R    ++     RG    A+  F ++   G  PS 
Sbjct: 270 KVLDTQPENWQAVVSAFERIKKPSRREFGLMVGYYARRGDMHRARQTFESMRARGIDPSS 329

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
             YT+L+ A  + +      S + ++ E G++   + ++ V+  F++ GN E A   F K
Sbjct: 330 HVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNAEAADCWFKK 389

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
            KE         Y  +I  Y  A   + +  L+  M  EG   P L  Y+ ++  +   +
Sbjct: 390 AKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAP-LDIYHTMMDGYTMIR 448

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           N  +   V  ++   G  P V+TY  +   Y + G+  +A EV   M+  G++ N +T  
Sbjct: 449 NEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGIKHNMKTYS 508

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           ++I+G+ K      A      + + G+ P++V++N +IK F  + + D    ++  M++ 
Sbjct: 509 MLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIHMVKEMQKE 568

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
           R  P   T+  I++ ++ AG M +  EIFD M ++G  P  H ++ L  G V +++ EKA
Sbjct: 569 RCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLVEKRKMEKA 628

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
            E+L  M  +G  P+   +TTI+ G+ + G   +A E F KM   G+  ++ T+E L+
Sbjct: 629 VEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNEGLQLDVFTYEALL 686



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 184/413 (44%), Gaps = 42/413 (10%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           F  V++   E  N +  +  F ++K+    P+   +  ++  Y   G    + +  + M 
Sbjct: 268 FRKVLDTQPE--NWQAVVSAFERIKK----PSRREFGLMVGYYARRGDMHRARQTFESMR 321

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
             G + P+   Y  L+ A+   +++ EA + + KM   G++  +VTY+ +   +A+ G A
Sbjct: 322 ARG-IDPSSHVYTSLIHAYAVGRDMEEALSCVRKMNEEGIEMSLVTYSIVVGGFAKFGNA 380

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           + A+    + +      N    G II  YC+   +  A    R M+E G+   L I++ +
Sbjct: 381 EAADCWFKKAKERHTNLNAYIYGNIIYAYCQACNMDRAEALVREMEEEGIDAPLDIYHTM 440

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           + G+  I + +    V   +KE    P VITY  ++N ++  G + K  E+   M   GI
Sbjct: 441 MDGYTMIRNEEKCLIVFKRLKECGFAPSVITYGCLINMYTKIGKVSKALEVSKMMKSVGI 500

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI- 443
           K +   YS+L  G+++ ++   A  +   +I+ G  P+VV++  II  +C  G+MDRAI 
Sbjct: 501 KHNMKTYSMLINGFLKLKDWTNAFAVFEDVIKDGLKPDVVLYNNIIKAFCGMGNMDRAIH 560

Query: 444 ----------------------------------EVFDKMCEHGVSPNLKTFETLMWGYS 469
                                             E+FD M   G  P + TF  L+ G  
Sbjct: 561 MVKEMQKERCRPTSRTFMPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTFNALVLGLV 620

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           E R+  +A EIL  M   GV P + T+  +     A G T +A    +K++N+
Sbjct: 621 EKRKMEKAVEILDEMALAGVSPDEHTYTTIMHGYAALGDTGKAFEYFTKMRNE 673


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/428 (28%), Positives = 216/428 (50%), Gaps = 12/428 (2%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G+K S ++   L+ AL  + R   +  +  ++    + P+   FN VINA  ++G M +A
Sbjct: 183 GYKLSALSCKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGY---GIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
            D    MK  G +P   +YNTLI GY   G  GK  ++  +L  M  E +V PNL T+N+
Sbjct: 243 RDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV-ENDVSPNLTTFNI 301

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L+  +  + N+  +  V  +M    +KP+V++YN++       G+  +A  +  +M   G
Sbjct: 302 LIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAG 361

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           VQPN  T   +I+G+CK   +KEAL    ++K  G  P   ++N+LI  + ++     +D
Sbjct: 362 VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKL---GKID 418

Query: 339 EVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
           +  AL +E     + PDV TY+ ++      G ++  K++FD +   G+ PD   + IL 
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILM 477

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM-CEHGV 454
           +GY R+ E  KA  LL  M + G  P  + +  ++ G+C +G++  A  +  +M  E  +
Sbjct: 478 EGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRL 537

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
             N+ ++  L+ GYS+  +   A  +L  M   G+ P + T+ ++ E     G   + + 
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPDIEG 597

Query: 515 ILSKIKNK 522
            L  +  K
Sbjct: 598 HLFNVSTK 605



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 181/362 (50%), Gaps = 6/362 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL---AALTIQKRFNSIHS 128
           V +   ++N+L + GK  +A+ +  ++   G  P++V+Y TL+     L    +     +
Sbjct: 223 VFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADA 282

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++ ++ EN + P+   FN +I+ F +  N+  +M  F +M +  + P   +YN+LI G  
Sbjct: 283 VLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLC 342

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             GK  E++ + D M   G V+PNL TYN L+  +C    + EA ++   +   G  P  
Sbjct: 343 NGGKISEAISMRDKMVSAG-VQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTT 401

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
             YN +  AY + G+ D    +  EME  G+ P+  T   +I+G C+ G I+ A +    
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           +   G+ P+LV F++L++G+    +      +L  M +  + P  +TY+ +M  +   G 
Sbjct: 462 LTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGN 520

Query: 369 MDKCKEIFDDMGKA-GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
           +     +   M K   ++ +  +Y++L +GY ++ + E A  LL  M+E G  PN + + 
Sbjct: 521 LKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE 580

Query: 428 TI 429
            +
Sbjct: 581 IV 582



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 107/435 (24%), Positives = 207/435 (47%), Gaps = 28/435 (6%)

Query: 113 LLAALTIQKRFNSIHSIMSQVEENGMDP------------DSIFFNAVIN-----AFSES 155
           LL +L   KR++ I S +     NG D             D++  N++I      A++ +
Sbjct: 107 LLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANN 166

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
              E   + F +    G   +  +   L+       +  +   +   M R   ++PN+ T
Sbjct: 167 SRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSADVEYVYKEMIRR-KIQPNVFT 225

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ---NGEADQAEEVIV 272
           +NV++ A C    + +A +VM  M   G  P+VV+YNT+   Y +   NG+  +A+ V+ 
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           EM  N V PN  T  I+I G+ K+  +  +++  + M +  V PN++ +N LI G   + 
Sbjct: 286 EMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLING---LC 342

Query: 333 DRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +   + E +++   M    V P++ITY+ ++N +     + +  ++F  +   G  P   
Sbjct: 343 NGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTR 402

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y++L   Y +  + +    L   M   G  P+V  +  +I+G C +G+++ A ++FD++
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G+ P+L TF  LM GY    +  +A  +L+ M   G+ P+  T+ ++ +     G  
Sbjct: 463 TSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNL 521

Query: 510 KEAKRILSKIKNKER 524
           K A  + ++++ + R
Sbjct: 522 KAATNMRTQMEKERR 536



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 84/277 (30%), Positives = 150/277 (54%), Gaps = 3/277 (1%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +F  +++   KP++++Y +L+  L    + +   S+  ++   G+ P+ I +NA+IN F 
Sbjct: 318 VFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFC 377

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           ++  ++EA+D F  +K  G  PTT  YN LI  Y   GK ++   L + M REG + P++
Sbjct: 378 KNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREG-IVPDV 436

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            TYN L+   C   NI  A  +  ++ + G+ PD+VT++ +   Y + GE+ +A  ++ E
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKE 495

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGFVEIM 332
           M   G++P   T  I++ GYCKEG +K A      M KE  +  N+  +N+L++G+ +  
Sbjct: 496 MSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
             +  + +L  M E  + P+ ITY  +       GF+
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFV 592



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 168/339 (49%), Gaps = 19/339 (5%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  +A A+   ++E    P+L T+  L+              +  ++ +  + P+ I +
Sbjct: 275 GKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISY 334

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N++IN     G + EA+    KM  +G+ P   TYN LI G+      +E++ +   +  
Sbjct: 335 NSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKG 394

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G V P  R YN+L+ A+C    I + + +  +M   G+ PDV TYN +     +NG  +
Sbjct: 395 QGAV-PTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A+++  ++   G+ P+  T  I++ GYC++G+ ++A    + M + G+ P  + +N+++
Sbjct: 454 AAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVM 512

Query: 326 KGFVEIMDRDGVDEVLALM-KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           KG+ +  +      +   M KE R+  +V +Y+ ++  +S  G ++    + ++M + G+
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
            P+   Y I     V+E+           M++ GF P++
Sbjct: 573 VPNRITYEI-----VKEE-----------MVDQGFVPDI 595



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 93/440 (21%), Positives = 189/440 (42%), Gaps = 18/440 (4%)

Query: 88  PQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI--FF 145
           P+   A+  +LIE  H   L  + T +            + +  Q+  + +DPD    ++
Sbjct: 39  PRYDVAVIADLIEKQHWSKLGVHVTDINP----------NELFRQLISSELDPDLCLRYY 88

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           + ++     S ++E    TF  +         S   + + G+   G   +   +   +S 
Sbjct: 89  SWLVKNSDISVSLEL---TFKLLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISM 145

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
             NV  N    ++LV A+ N       +    +    G K   ++   +  A  +   + 
Sbjct: 146 CDNVCVNSIIADMLVLAYANNSRFELGFEAFKRSGYYGYKLSALSCKPLMIALLKENRSA 205

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
             E V  EM    +QPN  T  ++I+  CK GK+ +A      MK YG  PN+V +N LI
Sbjct: 206 DVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLI 265

Query: 326 KGFVEIMDRDGV---DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            G+ ++     +   D VL  M E  V+P++ T++ +++ +     +    ++F +M   
Sbjct: 266 DGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQ 325

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
            +KP+  +Y+ L  G     +  +A  +   M+ +G  PN++ +  +I+G+C +  +  A
Sbjct: 326 DVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEA 385

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           +++F  +   G  P  + +  L+  Y +  +      + + M+  G+ P   T+  L   
Sbjct: 386 LDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAG 445

Query: 503 RRATGLTKEAKRILSKIKNK 522
               G  + AK++  ++ +K
Sbjct: 446 LCRNGNIEAAKKLFDQLTSK 465


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 221/467 (47%), Gaps = 34/467 (7%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            +A + FN++      P    +  +L +L   KR+ +  S+  Q+E + ++PD    N +
Sbjct: 40  DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII 99

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG- 207
           IN F   G +  A     K+ + G  P T T NTL+KG  + GK +E+++  D +  +G 
Sbjct: 100 INCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGF 159

Query: 208 ---------------------------------NVKPNLRTYNVLVRAWCNEKNITEAWN 234
                                            +++PN+  Y++++   C +  + EA++
Sbjct: 160 RLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYD 219

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           +  +M   G+ PDVVTY+ + + +   G+ ++A +++ EM    + P+  T  I++   C
Sbjct: 220 LYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALC 279

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           KEGK+KEA      M +  V+ ++V+++ L+ G+  + + +    V   M +  V PDV 
Sbjct: 280 KEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVH 339

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
            YS ++N       +D+   +F+++ +  + PD   Y+ L     +        +L   M
Sbjct: 340 CYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEM 399

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           ++ G  P+V+ +  +I   C +G +DRAI +F+KM +  + PN+ TF  L+ G  +  + 
Sbjct: 400 LDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRL 459

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             A E  Q +   G      T+ ++       GL  EA  + S++++
Sbjct: 460 KNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMED 506



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 212/416 (50%), Gaps = 1/416 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  LM  L   GK +EA    + ++  G + S ++Y  L+  +       +   ++ ++
Sbjct: 130 TLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRI 189

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E   + P+ + ++ +I+   +   ++EA D + +M   G++P   TY+ L+ G+ I G+ 
Sbjct: 190 ERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQL 249

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             ++ LL+ M  E N+ P++ TY +LV A C E  + EA NV+  M  + +  DVV Y+T
Sbjct: 250 NRAIDLLNEMVLE-NINPDIYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYST 308

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    E + A+ V   M   GV P+     I+I+G CK  ++ EAL     + +  
Sbjct: 309 LMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKN 368

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P+ V +  LI    +      V ++   M +    PDVITY+ +++A    G +D+  
Sbjct: 369 MVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAI 428

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F+ M    I+P+ + ++IL  G  +    + A E    ++  G+  NV  +T +I+G 
Sbjct: 429 ALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGL 488

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           C +G +D A+ +  +M ++G   +  TFE ++  + +  +  +AE++++ M A G+
Sbjct: 489 CKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 144/312 (46%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P+   +N ++ +  N K    A ++  +M  S ++PD  T N I   +   G+   A   
Sbjct: 56  PHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSG 115

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + ++   G QPN  T   ++ G C EGK+KEALRF   +   G   + + + +LI G  +
Sbjct: 116 VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCK 175

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           I +      +L  ++ + + P+V+ YS I++       +D+  +++ +M   GI PD   
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKGISPDVVT 235

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YSIL  G+    +  +A +LL  M+    +P++  +T ++   C +G +  A  V   M 
Sbjct: 236 YSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVLAVMV 295

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           +  V+ ++  + TLM GY    +   A+ +   M   GV P    + ++           
Sbjct: 296 KACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKIKRVD 355

Query: 511 EAKRILSKIKNK 522
           EA  +  +I  K
Sbjct: 356 EALNLFEEIHQK 367



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/275 (25%), Positives = 136/275 (49%), Gaps = 4/275 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T L+++L + GK +EA+ +   +++      +V Y+TL+    +    N+   +  
Sbjct: 268 IYTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFY 327

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G+ PD   ++ +IN   +   ++EA++ F ++ +  + P T TY +LI     +G
Sbjct: 328 TMTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSG 387

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +      L D M   G   P++ TYN L+ A C   ++  A  + +KM    ++P+V T+
Sbjct: 388 RISYVWDLFDEMLDRGQ-PPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTF 446

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     + G    A E   ++   G   N RT  ++I+G CKEG + EAL     M++
Sbjct: 447 TILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMED 506

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
            G   + V F ++I+ F    D+D  D+   L++E
Sbjct: 507 NGCISDAVTFEIMIRAF---FDKDENDKAEKLVRE 538



 Score = 45.8 bits (107), Expect = 0.062,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 53/102 (51%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++ L + G+ + A   F +L+  G+  ++ TYT ++  L  +   +   ++ S
Sbjct: 443 VYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQS 502

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL 173
           ++E+NG   D++ F  +I AF +    ++A     +M   GL
Sbjct: 503 RMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/452 (24%), Positives = 218/452 (48%), Gaps = 50/452 (11%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+N L    +  E  A+   ++  G+ P +VTYTTL+  L ++ R +    + +++
Sbjct: 133 TLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRM 192

Query: 134 EENGMDPDSIFFNAVINAFSESGNM----------------------------------- 158
           ++ G  P++I +  ++     +GN+                                   
Sbjct: 193 QKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDAL 252

Query: 159 ------EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
                 +EA D F +MK  G+TPT  +Y +L+         EE+ +L + M  +G V+PN
Sbjct: 253 CKDRREDEARDLFEEMKVQGMTPTVISYTSLMW--------EEAKRLFNEMVNQG-VQPN 303

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
           + T+NVL+   C E  + EA +++  M   G+ P+++TYN++   +   G+ + A E+ V
Sbjct: 304 VVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFV 363

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
            M   G +P+     ++I+GYCK  K++EA++    M + G  P++  +  L+ G  +  
Sbjct: 364 SMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGG 423

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
                 ++  +MK + +  D+  Y   +N     G + +  E+F+ +    IK D   ++
Sbjct: 424 KVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFN 483

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            L  G  +  + E A EL   + +    P+VV +  +I  +C  G + +A  +F KM ++
Sbjct: 484 CLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKN 543

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           G +P+  T+ TL+ G+ E+++  +  E+L +M
Sbjct: 544 GCTPDKITYATLIRGFFESKKLEKVVELLHMM 575



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 213/445 (47%), Gaps = 14/445 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S T L++ L +     +   ++N +   G  P   T   LL  L    R     ++M+
Sbjct: 96  LSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGLAVMA 155

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  PD + +  +I        + +A   F +M++ G TP   TY TL+KG    G
Sbjct: 156 GILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITYGTLMKGLCRTG 215

Query: 192 KPEESVKLLDLMSREG-----NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
               ++KL   M  +      N KP + +Y++++ A C ++   EA ++  +M   GM P
Sbjct: 216 NISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKVQGMTP 275

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
            V++Y ++          ++A+ +  EM + GVQPN  T  ++I   CKEGK+ EA    
Sbjct: 276 TVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLL 327

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             M + G+ PNL+ +N LI+GF  + D +   E+   M      PDVI Y+ ++N +   
Sbjct: 328 EVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKT 387

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             +++  ++++ M + G +PD   Y  L  G  +  +   A++L   M   G   ++ I+
Sbjct: 388 SKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIY 447

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
              ++G C +G +  A+E+F+K+  + +  +++ F  L+ G  +A +   A E+ + +  
Sbjct: 448 GIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQ 507

Query: 487 FGVHPQKSTF-LLLAEARRATGLTK 510
             + P   T+ +++ E  R   + K
Sbjct: 508 EELQPDVVTYNIMIHEFCRGGQVVK 532



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 177/356 (49%), Gaps = 9/356 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            V S + ++++L +  +  EA+ +F  +   G  P++++YT+L+        +     + 
Sbjct: 241 VVISYSIIIDALCKDRREDEARDLFEEMKVQGMTPTVISYTSLM--------WEEAKRLF 292

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++   G+ P+ + FN +I+   + G + EA D    M + G+ P   TYN+LI+G+ + 
Sbjct: 293 NEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLV 352

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    + +L   M  +G  +P++  Y VL+  +C    + EA  + + M   G +PDV T
Sbjct: 353 GDLNSARELFVSMPSKG-CEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKT 411

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  + T   Q G+   A+++   M+  G+  +    GI ++G CK G + EA+     +K
Sbjct: 412 YGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLK 471

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            Y +  ++  FN LI G  +    +   E+   + +  + PDV+TY+ +++ +   G + 
Sbjct: 472 SYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVV 531

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           K   +F  M K G  PD   Y+ L +G+   ++ EK  ELL  M++     +V I 
Sbjct: 532 KANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDVNIL 587



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/491 (23%), Positives = 223/491 (45%), Gaps = 28/491 (5%)

Query: 48  NSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAI-----FNNLIEGG 102
           +S P  S    H S  ++ ++  T  S  + ++  +   K     AI     F+ ++   
Sbjct: 32  SSNPHFSSAVHHKSLNVSPQNFNTPISFQQQLSMFLHNCKTGNITAIQAFQFFHLMMYSN 91

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
             P L ++T LL+ L   K ++ +  + +Q+  +G+ PD    N ++N       + E +
Sbjct: 92  PTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNVNRVGEGL 151

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
                +   G  P   TY TLIKG  +  +  ++  L   M + G   PN  TY  L++ 
Sbjct: 152 AVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLG-CTPNAITYGTLMKG 210

Query: 223 WCNEKNITEAWNVMHKMA------ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
            C   NI+ A  +  +M           KP V++Y+ I  A  ++   D+A ++  EM+ 
Sbjct: 211 LCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDLFEEMKV 270

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G+ P       +IS        +EA R    M   GV PN+V FN+LI    +++ ++G
Sbjct: 271 QGMTPT------VISY--TSLMWEEAKRLFNEMVNQGVQPNVVTFNVLI----DVLCKEG 318

Query: 337 ----VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
                 ++L +M +  + P+++TY++++  +   G ++  +E+F  M   G +PD   Y+
Sbjct: 319 KVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVICYT 378

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           +L  GY +  + E+A +L   M++ G  P+V  +  +++G    G +  A ++F  M  +
Sbjct: 379 VLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVY 438

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G+  +L  +   + G  +    + A E+   +K++ +      F  L +     G  + A
Sbjct: 439 GIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLETA 498

Query: 513 KRILSKIKNKE 523
             +  K+  +E
Sbjct: 499 WELFEKLPQEE 509


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 213/433 (49%), Gaps = 12/433 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH----KPSLVTYTTLLAALTIQKRFNSIH 127
           +RS   L+++ +   +  +A A F +L  G       P+L TY  +L +L  +   +   
Sbjct: 119 IRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAV 178

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           ++   +    + PD I ++ ++   ++   ++ A+D   +M  SG+ P    YN L+ G 
Sbjct: 179 TLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLGGC 238

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
             AG+ E+ +++ D + ++   +PNL TYNV++   C      E   V  +M A+ ++PD
Sbjct: 239 FKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPD 298

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           V+TY  +     ++G+ D A  V  E+   G+  +      ++ G+C+ G+++EA +F  
Sbjct: 299 VITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWD 358

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM----KEFRVNPDVITYSTIMNAW 363
           +    G+  NL  +N++IKG   + D   VDE + L     K+    PD +T+ T+++  
Sbjct: 359 SAGFAGLR-NLRTYNIMIKG---LFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGL 414

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              GF +K   IF++   +G + D  +YS +  G         A ++   M + G  PN 
Sbjct: 415 CQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNS 474

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
            I+  +ISG+C       A+ ++ KM ++G SP + T+ TL+ G  +A +   A  + + 
Sbjct: 475 HIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVARE 534

Query: 484 MKAFGVHPQKSTF 496
           M   G  P  +T+
Sbjct: 535 MVENGFTPDITTY 547



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/426 (22%), Positives = 200/426 (46%), Gaps = 2/426 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L + G+ +E   ++  ++    +P ++TY  L+  L      +    + S++ + G
Sbjct: 270 MLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTG 329

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D+  +N+++  F ++G ++EA   FW            TYN +IKG   +G  +E++
Sbjct: 330 LVIDAAMYNSLVKGFCQAGRVQEAW-KFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAI 388

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L DL+ ++    P+  T+  L+   C      +A+ +  +   SG + DV +Y+++   
Sbjct: 389 ELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMING 448

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G    A +V  +M+ +G +PN      +ISG+C+  +  +A+R    M + G  P 
Sbjct: 449 LCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPT 508

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ +N LI G  +         V   M E    PD+ TY +++    +   +D    I+ 
Sbjct: 509 VITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWK 568

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE-SGFHPNVVIFTTIISGWCSD 436
            +   G+K D   ++IL  G     + ++A  +   M E     PN+V + T++ G    
Sbjct: 569 QILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYET 628

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +D+A  ++  + E G+ P++ ++ T + G     +     ++L  + + G+ P   T+
Sbjct: 629 GYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITW 688

Query: 497 LLLAEA 502
            +L  A
Sbjct: 689 NILVRA 694



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/461 (23%), Positives = 207/461 (44%), Gaps = 24/461 (5%)

Query: 78  LMNSLIER---GKPQEAQAIFNNLIEGGHKP------SLVTYTTLLAALTIQKRFNSIHS 128
           L+  L+ R     P     + N L    H+P      +LV  +    A+      ++  +
Sbjct: 49  LLFHLLRRLATSSPSHLPCLLNLLPRLRHRPRFSESAALVVLSAFSRAIMPDAALDAFRA 108

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-----LTPTTSTYNTL 183
           + S +   G +P     NA+++AF  +    +A D F+     G     + P   TYN +
Sbjct: 109 LPSIL---GCNPGIRSHNALLDAFVRARRFSDA-DAFFASLSHGAFGRRIAPNLQTYNIV 164

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++     G  + +V L D + R   V P+  TY+ L+     +  +  A +++ +M  SG
Sbjct: 165 LRSLCARGDLDRAVTLFDSLRRR-QVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSG 223

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN-GVQPNGRTCGIIISGYCKEGKIKEA 302
           ++PDVV YN +     + GE ++   V  ++  + G +PN  T  +++ G CK G+ KE 
Sbjct: 224 VQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEV 283

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M    + P+++ + +LI G     D DG   V + + +  +  D   Y++++  
Sbjct: 284 GEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKG 343

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH-- 420
           +  AG + +  + +D  G AG++ +   Y+I+ KG       ++A EL   ++E      
Sbjct: 344 FCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIEL-WDLLEKDVACI 401

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+ V F T+I G C +G  ++A  +F++    G   ++ ++ +++ G     +   A ++
Sbjct: 402 PDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKV 461

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            + M   G  P    +  L         T +A RI SK+ +
Sbjct: 462 YEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD 502



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 156/333 (46%), Gaps = 3/333 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNL-IEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           R +R+   ++  L + G   EA  +++ L  +    P  VT+ TL+  L      N   +
Sbjct: 366 RNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFT 425

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           I  +   +G   D   ++++IN     G + +A+  + KM + G  P +  YN LI G+ 
Sbjct: 426 IFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFC 485

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
              +  ++V++   M+  G   P + TYN L+   C  +   EA +V  +M  +G  PD+
Sbjct: 486 QVYRTSDAVRIYSKMADNG-CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDI 544

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TY ++      + + D A  +  ++ + G++ +     I+I G C  GK+ EAL     
Sbjct: 545 TTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSD 604

Query: 309 MKEY-GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
           MKE     PNLV +N L+ G  E    D    +   + E  + PD+I+Y+T +    +  
Sbjct: 605 MKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCD 664

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
            + +  ++ D++   GI P    ++IL +  ++
Sbjct: 665 RIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 113/238 (47%), Gaps = 1/238 (0%)

Query: 64  MNKESCRTVRSM-TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+K+ C+    +   L++   +  +  +A  I++ + + G  P+++TY TL+  L   ++
Sbjct: 465 MDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEK 524

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +    S+  ++ ENG  PD   + ++I        +++A+  + ++   GL      +N 
Sbjct: 525 YQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNI 584

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G   AGK +E++ +   M  + N  PNL TYN L+        I +A  +   +   
Sbjct: 585 LIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITED 644

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
           G++PD+++YNT            +  +++ E+   G+ P   T  I++    K G I+
Sbjct: 645 GLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 213/440 (48%), Gaps = 2/440 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK   A   F+ +   G  P  VTYTTL+  L   +R +    +  +++ N   P    +
Sbjct: 287 GKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAY 346

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +I  +  +G  +EA     + K  G  P+   YN ++   G  GK EE++++ D M +
Sbjct: 347 NTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ 406

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +    PNL TYN+L+   C    +  A  V   M  +G+ P+++T N +     +  + D
Sbjct: 407 DA--APNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLD 464

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  + + ++H    P+ RT   +I G  + G++ +A      M +    PN+V++  LI
Sbjct: 465 EACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLI 524

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           + F +   ++   ++   M     +PD++  ++ M+    AG ++K + +F+++   G+ 
Sbjct: 525 QNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLV 584

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD  +YSIL  G V+     +  +L   M E G H +V+ + T+I G+C  G +D+A ++
Sbjct: 585 PDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQL 644

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
            ++M   G+ P + T+ +++ G ++  +   A  + +  K+ GV      +  L +    
Sbjct: 645 LEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGK 704

Query: 506 TGLTKEAKRILSKIKNKERT 525
            G   EA  IL ++  K  T
Sbjct: 705 VGRIDEAYLILEELMQKGLT 724



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/447 (23%), Positives = 212/447 (47%), Gaps = 2/447 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
            +L+ S ++  K +EA  +   + +   +P+   YTTL+ AL+   R + + ++  Q++E
Sbjct: 172 VELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQE 231

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G + +   F  ++  F+  G ++ A+    +MK +  T     YN  I  +G  GK + 
Sbjct: 232 IGYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDM 291

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + K    M  +G V P+  TY  L+   C  + + EA  +  ++  +   P V  YNT+ 
Sbjct: 292 AWKFFHEMKAQGLV-PDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMI 350

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             Y   G+ D+A  ++   +  G  P+      I++   ++GK++EALR    M++    
Sbjct: 351 MGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQ-DAA 409

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PNL  +N+LI    +  + +   +V   MKE  + P+++T + +++    A  +D+   I
Sbjct: 410 PNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSI 469

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F  +      PD+  +  L  G  R    + A  L   M++S   PNVV++T++I  +  
Sbjct: 470 FLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFK 529

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G  +   +++ +M   G SP+L    + M    +A +  +   + + +KA G+ P   +
Sbjct: 530 CGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRS 589

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNK 522
           + +L       G ++E  ++  ++K +
Sbjct: 590 YSILIHGLVKAGFSRETYKLFYEMKEQ 616



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 214/444 (48%), Gaps = 7/444 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + ++  +++ L +  K  EA +IF  L      P   T+ +L+  L  + R +  +S+  
Sbjct: 447 IMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYE 506

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ ++   P+ + + ++I  F + G  E+    + +M   G +P     N+ +     AG
Sbjct: 507 KMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAG 566

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E+   L + +  +G V P++R+Y++L+          E + + ++M   G+  DV+ Y
Sbjct: 567 EVEKGRALFEEIKAQGLV-PDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAY 625

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   + ++G+ D+A +++ EM+  G+QP   T G ++ G  K  ++ EA       K 
Sbjct: 626 NTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKS 685

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            GV  N+VI++ LI GF ++     +DE   +++E     + P+  T++ +++A   A  
Sbjct: 686 IGVDLNVVIYSSLIDGFGKV---GRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEE 742

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D+ +  F +M      P+A  YSI+  G    ++  KA      M + G  PN + +TT
Sbjct: 743 IDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTT 802

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I+G    G++  A  +FD+    G  P+   +  ++ G S A +   A  + +  +  G
Sbjct: 803 MIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKG 862

Query: 489 VHPQKSTFLLLAEARRATGLTKEA 512
                 T ++L +A       ++A
Sbjct: 863 CRVNSKTCVVLLDALHKADCLEQA 886



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/383 (22%), Positives = 168/383 (43%), Gaps = 8/383 (2%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +NA +   + + N++       +M  +G   +      L+  +  + K +E+  ++++M 
Sbjct: 136 YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMM- 194

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R+   +P    Y  L+ A            + H+M   G + +V  + T+   +A+ G  
Sbjct: 195 RKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRI 254

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           D A  ++ EM+ N    +     + I  + K GK+  A +F   MK  G+ P+ V +  L
Sbjct: 255 DAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTL 314

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           I G +    R  +DE + L +E  +N   P V  Y+T++  + +AG  D+   + +   +
Sbjct: 315 I-GVLCKARR--LDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKR 371

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G  P   AY+ +     R+ + E+A  +   M +    PN+  +  +I   C  G ++ 
Sbjct: 372 KGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APNLTTYNILIDMLCKAGELEA 430

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A++V D M E G+ PN+ T   ++    +A++   A  I   +      P   TF  L +
Sbjct: 431 ALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLID 490

Query: 502 ARRATGLTKEAKRILSKIKNKER 524
                G   +A  +  K+ + ++
Sbjct: 491 GLGRRGRVDDAYSLYEKMLDSDQ 513



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 152/347 (43%), Gaps = 5/347 (1%)

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           LV ++     + EA+ V+  M     +P    Y T+  A +     D    +  +M+  G
Sbjct: 174 LVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIG 233

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
            + N      ++  + +EG+I  AL     MK      +LV++N+ I  F ++   D   
Sbjct: 234 YEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAW 293

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           +    MK   + PD +TY+T++     A  +D+  E+F+++      P  +AY+ +  GY
Sbjct: 294 KFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGY 353

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
               + ++A  LL      G  P+V+ +  I++     G ++ A+ + D+M     +PNL
Sbjct: 354 GSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEM-RQDAAPNL 412

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+  L+    +A +   A ++   MK  G+ P   T  ++ +         EA  I   
Sbjct: 413 TTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFLG 472

Query: 519 IKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLL---QIPNVV 562
           + +K  + +      + ++ L R    +   + Y  +L   QIPNVV
Sbjct: 473 LDHKVCSPDSRTFCSL-IDGLGRRGRVDDAYSLYEKMLDSDQIPNVV 518



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/241 (23%), Positives = 111/241 (46%), Gaps = 1/241 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   +++ L +  +  EA  +F      G   ++V Y++L+       R +  + I+
Sbjct: 656 TVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLIL 715

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G+ P+S  +N +++A  ++  ++EA   F  MK    +P   TY+ +I G  + 
Sbjct: 716 EELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMI 775

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K  ++      M ++G +KPN  TY  ++       N+ EA  +  +  ASG  PD   
Sbjct: 776 RKFNKAFVFWQEMQKQG-LKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSAC 834

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +    +   +A  A  V  E    G + N +TC +++    K   +++A      ++
Sbjct: 835 YNAMIEGLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQAAIVGAVLR 894

Query: 311 E 311
           E
Sbjct: 895 E 895



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/281 (20%), Positives = 117/281 (41%), Gaps = 2/281 (0%)

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P+V  YN      A+    D  E+++ EM   G   +      +++ + K  K+KEA   
Sbjct: 133 PEV--YNAFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGV 190

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              M+++   P    +  LI         D +  +   M+E     +V  ++T++  ++ 
Sbjct: 191 IEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAR 250

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G +D    + D+M       D   Y++    + +  + + A +    M   G  P+ V 
Sbjct: 251 EGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVT 310

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +TT+I   C    +D A+E+F+++  +   P +  + T++ GY  A +   A  +L+  K
Sbjct: 311 YTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQK 370

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTN 526
             G  P    +  +       G  +EA RI  +++     N
Sbjct: 371 RKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDAAPN 411


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 188/374 (50%), Gaps = 7/374 (1%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G  P +V+Y+T++    +      +  ++ +++  G+ P+   +N++I    +SG +++A
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
                +M   G+ P T  Y TLI G+   G  + + KL D M ++  + P+   Y  ++ 
Sbjct: 65  ERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQ-RIVPDFIAYTAVIC 123

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C    + EA  V +KM + G++PD VTY T+   Y ++GE ++A  +  +M  +G+ P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N  T   +  G CK G++  A      M   G+  N+  +N L+ G  +      + + +
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCK---SGNIRQAV 240

Query: 342 ALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            LM+E  V    PD IT++T+M+A+   G M K  E+  +M   G++P    +++L  G+
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
                 E  E LL  M+E G  PN   + +++  +C   +M    E++  MC  GV P+ 
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 459 KTFETLMWGYSEAR 472
            T+  L+ G+ +AR
Sbjct: 361 NTYNILIKGHCKAR 374



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 189/376 (50%), Gaps = 1/376 (0%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  PD + ++ VIN +   G +++ +    +M+  GL P   TYN++I     +GK +++
Sbjct: 5   GDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDA 64

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            ++L  M  +G V P+   Y  L+  +C   NI  A+ +  +M    + PD + Y  +  
Sbjct: 65  ERVLREMINQGIV-PDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              + G+  +A++V  +M   GV+P+  T   +I GYCK G++++A      M + G+ P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N+V +  L  G  ++   D  +E+L  M    +  ++ TY++++N    +G + +  ++ 
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M  AG+ PD   ++ L   Y +  E  KA ELL  M++ G  P V+ F  +++G+C  
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G ++    +   M E G+ PN  T+ +LM  Y          EI + M A GV P  +T+
Sbjct: 304 GMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTY 363

Query: 497 LLLAEARRATGLTKEA 512
            +L +        KEA
Sbjct: 364 NILIKGHCKARNMKEA 379



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 90/284 (31%), Positives = 153/284 (53%)

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M   G  PDVV+Y+T+   Y   GE  +  ++I EM+  G++PN  T   II   CK GK
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           + +A R  R M   G+ P+ V++  LI GF ++ +     ++   M++ R+ PD I Y+ 
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++      G M +  ++F+ M   G++PD   Y+ L  GY +  E EKA  L   M++SG
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PNVV +T +  G C  G +D A E+  +MC  G+  N+ T+ +L+ G  ++    +A 
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           ++++ M+  G++P   TF  L +A   TG   +A  +L ++ ++
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDR 284



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 165/307 (53%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P++ +Y+ ++  +C    + +   ++ +M   G+KP++ TYN+I     ++G+ D AE V
Sbjct: 8   PDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERV 67

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + EM + G+ P+      +I G+CK G I+ A +    M++  + P+ + +  +I G   
Sbjct: 68  LREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCR 127

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
                  D+V   M    V PD +TY+T+++ +  +G M+K   + + M ++G+ P+   
Sbjct: 128 CGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVT 187

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ LA G  +  + + A ELL  M   G   N+  + ++++G C  G++ +A+++ ++M 
Sbjct: 188 YTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEME 247

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
             G+ P+  TF TLM  Y +  +  +A E+L+ M   G+ P   TF +L      +G+ +
Sbjct: 248 VAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLE 307

Query: 511 EAKRILS 517
           + +R+L+
Sbjct: 308 DGERLLA 314



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/165 (28%), Positives = 78/165 (47%), Gaps = 1/165 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   LMN     G  ++ + +   ++E G  P+  TY +L+    I+        I 
Sbjct: 289 TVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIY 348

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   G+ PDS  +N +I    ++ NM+EA     +M E G   T S+YN++IKG+   
Sbjct: 349 KGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKK 408

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
            K  E+ +L + M REG +  +   YN+ V     E N+  A  +
Sbjct: 409 KKISEARELFEEMRREG-MAADAEIYNLFVDISYGEGNMETALEL 452


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 205/399 (51%), Gaps = 6/399 (1%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G K SL +   LL+AL  + +   +  +  ++ +  +  +   FN  IN    +G + +A
Sbjct: 160 GFKLSLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKA 219

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGY---GIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
            D    MK  G++P   TYNTL+ GY   G AGK  ++   +  M     + PN  T+N 
Sbjct: 220 EDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEM-LANKICPNEVTFNT 278

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L+  +C ++N+  A     +M   G+KP++VTYN++      NG+ ++A ++  +M   G
Sbjct: 279 LIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLG 338

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV-EIMDRDGV 337
           ++PN  T   +I+G+CK+  +KEA +    + +  + PN++ FN +I  +  E M  +G 
Sbjct: 339 LKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGF 398

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
               +++ E  + P+V TY+ ++        +   KE+ ++M   G+K D   Y+IL  G
Sbjct: 399 SLCSSMLDE-GILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDG 457

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             +  +   AE+LL  M   G  PN V + T++ G+C +G +  A+ V  +M +    PN
Sbjct: 458 LCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPN 517

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           + T+  L+ GY +  +   A  +L  M   G++P ++T+
Sbjct: 518 VVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 197/397 (49%), Gaps = 4/397 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ S   L+++L++  K  + + ++  +I+     +L T+   +  L    + N     +
Sbjct: 164 SLTSCNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAI 223

Query: 131 SQVEENGMDPDSIFFNAVINAFSE---SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
             ++  G+ P+ + +N +++ + +   +G M +A     +M  + + P   T+NTLI G+
Sbjct: 224 EDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGF 283

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
                   + K  + M ++G +KPN+ TYN L+   CN   + EA ++  KM   G+KP+
Sbjct: 284 CKDENVAAAKKAFEEMQKQG-LKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPN 342

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           +VTYN +   + +     +A +V  ++    + PN  T   +I  YCKEG ++E      
Sbjct: 343 IVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCS 402

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
           +M + G+ PN+  +N LI G     D     E+L  M+   +  DV+TY+ +++      
Sbjct: 403 SMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKND 462

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
                +++ ++M   G+KP+   Y+ L  GY  E + + A  +   M +    PNVV + 
Sbjct: 463 KSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYN 522

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            +I G+C    ++ A  + ++M E G++PN  T++ +
Sbjct: 523 VLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 89/278 (32%), Positives = 149/278 (53%), Gaps = 1/278 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+  F  + + G KP++VTY +L+  L    +      +  ++   G+ P+ + +NA+IN
Sbjct: 292 AKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALIN 351

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            F +   M+EA   F  + +  L P   T+NT+I  Y   G  EE   L   M  EG + 
Sbjct: 352 GFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG-IL 410

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN+ TYN L+   C ++++  A  ++++M   G+K DVVTYN +     +N ++  AE++
Sbjct: 411 PNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKL 470

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + EM + G++PN  T   ++ GYC EGK+K AL     M++    PN+V +N+LIKG+ +
Sbjct: 471 LNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCK 530

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           I   +  + +L  M E  +NP+  TY  +       GF
Sbjct: 531 INKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGF 568



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 110/469 (23%), Positives = 217/469 (46%), Gaps = 28/469 (5%)

Query: 124 NSIHSIMSQVEENGMDP--DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
           +++ S+   +  +G  P   ++  + ++ A+ ++  +  A + F + K+ G   + ++ N
Sbjct: 110 HTVSSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCN 169

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            L+       K  +   +   M +   +  NL T+N+ +   C    + +A + +  M A
Sbjct: 170 PLLSALVKENKIGDVEYVYKEMIKR-RIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKA 228

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQ---AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
            G+ P+VVTYNT+   Y + G A +   AE  + EM  N + PN  T   +I G+CK+  
Sbjct: 229 WGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDEN 288

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKEFRVNPDVIT 355
           +  A +    M++ G+ PN+V +N LI G   + +   ++E + L   M    + P+++T
Sbjct: 289 VAAAKKAFEEMQKQGLKPNIVTYNSLING---LCNNGKLEEAIDLWDKMVGLGLKPNIVT 345

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+ ++N +     M +  ++FDD+ K  + P+   ++ +   Y +E   E+   L  +M+
Sbjct: 346 YNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSML 405

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           + G  PNV  +  +I+G C    +  A E+ ++M   G+  ++ T+  L+ G  +  +  
Sbjct: 406 DEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSR 465

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK----------------I 519
            AE++L  M   G+ P   T+  L +     G  K A  + ++                I
Sbjct: 466 NAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLI 525

Query: 520 KNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKG 568
           K   + N++EA   +  E LE+  +   TT     L  +    S D +G
Sbjct: 526 KGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSPDIEG 574



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 93/407 (22%), Positives = 199/407 (48%), Gaps = 29/407 (7%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G++P S   + + N+   S  +   +D+F K ++   T ++  ++ L+ G    G+P  +
Sbjct: 77  GLEPTSKVLHFLANSKRYS-KVRSFLDSFVKNEKH--TVSSVFHSLLLDG----GRPGAT 129

Query: 197 VKLLDLM-------------------SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
             ++D++                   +++   K +L + N L+ A   E  I +   V  
Sbjct: 130 ALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLLSALVKENKIGDVEYVYK 189

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           +M    +  ++ T+N       + G+ ++AE+ I +M+  G+ PN  T   ++ GYCK G
Sbjct: 190 EMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRG 249

Query: 298 ---KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
              K+ +A  F + M    + PN V FN LI GF +  +     +    M++  + P+++
Sbjct: 250 SAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIV 309

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           TY++++N     G +++  +++D M   G+KP+   Y+ L  G+ +++  ++A ++   +
Sbjct: 310 TYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDV 369

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
            +    PNV+ F T+I  +C +G M+    +   M + G+ PN+ T+  L+ G    +  
Sbjct: 370 SKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDL 429

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             A+E+L  M+  G+     T+ +L +       ++ A+++L+++ N
Sbjct: 430 QAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFN 476


>gi|255549482|ref|XP_002515794.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545122|gb|EEF46633.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 924

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/436 (27%), Positives = 211/436 (48%), Gaps = 38/436 (8%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           + Y  ++ A       +   +++ ++E  G+D     ++ +++ ++  GN E+ +  F +
Sbjct: 412 IIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFER 471

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           +KE G  P+  +Y  LI  Y   GK  +++++  +M   G +K N++TY++L+  +   K
Sbjct: 472 LKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAG-IKHNMKTYSMLINGFLKLK 530

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           +   A+ +   +   G+KPDVV YN I  A+   G  D+A  ++ EM+    +P  RT  
Sbjct: 531 DWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFM 590

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
            II G+ + G++K AL     M+  G  P +  FN LI G VE    +   E+L  M   
Sbjct: 591 PIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALA 650

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH------------------ 389
            V+P+  TY+TIM+ ++  G   K  E F  +   G++ D +                  
Sbjct: 651 GVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSA 710

Query: 390 -----------------AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
                             Y+IL  G+ R  +  +A +L+  M + G  P++  +T+ I+ 
Sbjct: 711 LAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKPDIHTYTSFINA 770

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G M RA ++ ++M   GV PN+KT+ TL+ G++ A  P +A    Q MK  G+ P 
Sbjct: 771 CCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCFQEMKLAGLKPD 830

Query: 493 KSTF--LLLAEARRAT 506
           K+ +  L+ A   RAT
Sbjct: 831 KAVYHCLMTALLSRAT 846



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 205/415 (49%), Gaps = 20/415 (4%)

Query: 65  NKESCRTVRSMTK-------------LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYT 111
           N+E C TV    K             L+N   + GK  +A  +   +   G K ++ TY+
Sbjct: 461 NEEKCLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYS 520

Query: 112 TLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES 171
            L+      K + +  +I   V ++G+ PD + +N +I AF   G M+ A+    +M++ 
Sbjct: 521 MLINGFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKE 580

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE 231
              PT+ T+  +I G+  AG+ + ++ + D+M R G + P + T+N L+     ++ + +
Sbjct: 581 RHRPTSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCI-PTVHTFNALILGLVEKRQMEK 639

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           A  ++ +MA +G+ P+  TY TI   YA  G+  +A E   ++   G+Q +  T   ++ 
Sbjct: 640 AIEILDEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLK 699

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
             CK G+++ AL   + M    +  N  ++N+LI G+    D     +++  MK+  V P
Sbjct: 700 ACCKSGRMQSALAVTKEMSAQNIPRNTFVYNILIDGWARRGDVWEAADLMQQMKQGGVKP 759

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           D+ TY++ +NA   AG M +  ++ ++M  +G+KP+   Y+ L  G+ R   PEKA    
Sbjct: 760 DIHTYTSFINACCKAGDMLRASKMMEEMETSGVKPNVKTYTTLIHGWARASLPEKALRCF 819

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRA------IEVFDKMCEHGVSPNLKT 460
             M  +G  P+  ++  +++   S  ++  A      + +  +M E G+  ++ T
Sbjct: 820 QEMKLAGLKPDKAVYHCLMTALLSRATVTEAYVRPGILSICKEMIESGLIVDMGT 874



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 199/409 (48%), Gaps = 1/409 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           KPS   Y  +++    +   +        +   G++P S  + ++I+A++   +MEEA+ 
Sbjct: 303 KPSRREYGLMVSYYARRGDMHRARQTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALS 362

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              KMKE G+  +  TY+ ++ G+   G  + + +     +++ +   N   Y  ++ A+
Sbjct: 363 CARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFK-EAKDRHSHMNAIIYGNMIYAY 421

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C   N+ +A  ++ +M   G+   +  Y+T+   Y   G  ++   V   ++  G  P+ 
Sbjct: 422 CQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEKCLTVFERLKECGFAPSV 481

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            + G +I+ Y K GKI +AL  ++ M+  G+  N+  +++LI GF+++ D      +   
Sbjct: 482 VSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLINGFLKLKDWANAFAIFED 541

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           + +  + PDV+ Y+ I+ A+   G MD+   +  +M K   +P +  +  +  G+ R  E
Sbjct: 542 VVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRPTSRTFMPIIHGFARAGE 601

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            ++A ++   M  SG  P V  F  +I G      M++AIE+ D+M   GVSPN  T+ T
Sbjct: 602 MKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEILDEMALAGVSPNEHTYTT 661

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           +M GY+      +A E    ++  G+     T+  L +A   +G  + A
Sbjct: 662 IMHGYAALGDTGKAFEYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSA 710



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 180/401 (44%), Gaps = 40/401 (9%)

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
           N ++ +  F ++K+    P+   Y  ++  Y   G    + +  + M   G ++P    Y
Sbjct: 290 NWQDVVSAFERIKK----PSRREYGLMVSYYARRGDMHRARQTFESMRARG-IEPTSHVY 344

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
             L+ A+   +++ EA +   KM   G++  +VTY+ I   +A+ G AD A+    E + 
Sbjct: 345 TSLIHAYAVGRDMEEALSCARKMKEEGVEMSLVTYSIIVGGFAKIGNADAADRWFKEAKD 404

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
                N    G +I  YC+   + +A    R M+  G+   + I++ ++ G+  + + + 
Sbjct: 405 RHSHMNAIIYGNMIYAYCQTCNMDQAEALVREMEGEGIDAPIDIYHTMMDGYTMVGNEEK 464

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              V   +KE    P V++Y  ++N ++  G + K  E+   M  AGIK +   YS+L  
Sbjct: 465 CLTVFERLKECGFAPSVVSYGCLINLYAKVGKISKALEVSKMMESAGIKHNMKTYSMLIN 524

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA-------------- 442
           G+++ ++   A  +   +++ G  P+VV++  II  +C  G+MDRA              
Sbjct: 525 GFLKLKDWANAFAIFEDVVKDGLKPDVVLYNNIIRAFCGMGTMDRAICMVKEMQKERHRP 584

Query: 443 ---------------------IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
                                ++VFD M   G  P + TF  L+ G  E RQ  +A EIL
Sbjct: 585 TSRTFMPIIHGFARAGEMKRALDVFDMMRRSGCIPTVHTFNALILGLVEKRQMEKAIEIL 644

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             M   GV P + T+  +     A G T +A    +K++++
Sbjct: 645 DEMALAGVSPNEHTYTTIMHGYAALGDTGKAFEYFTKLRDE 685


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 219/447 (48%), Gaps = 8/447 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T  +  L   GK  EA  IF  + + G  P LVTYT L+ AL    +  +   +  
Sbjct: 262 VYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFV 321

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++ NG  PD + +  +++ F++ G+++   + + +M+  G  P   T+  L+     A 
Sbjct: 322 KMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKAR 381

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+    D+M ++G + PNL TYN L+        I +A  ++  M + G++P   TY
Sbjct: 382 DFDEAFATFDVMRKQG-ILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTY 440

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N     + ++GE  +A E   +M+  G+ PN   C   +    + G+++EA      ++E
Sbjct: 441 NIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRE 500

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGF 368
            G+ P+ V +N+++K + ++     VDE + L+ E   N   PDVI  ++++++   AG 
Sbjct: 501 NGLAPDSVTYNMMMKCYSKV---GQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D+  ++FD M    + P    Y+ L  G  +E   +KA EL  +MIE    PN + F T
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNT 617

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++  +C +  ++ A+++F KM      P++ T+ T+++G  +  +   A      +K   
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-S 676

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRI 515
           +HP   T   L       G   +A  I
Sbjct: 677 MHPDHVTICTLLPGLVKCGQIGDAISI 703



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 217/446 (48%), Gaps = 1/446 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L++ LI+ G   EA  ++  ++  G KPSL TY+ L+ AL  ++    +  ++ ++
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+ G+ P+   F   I     +G ++EA + F +M + G  P   TY  LI     AG+ 
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQL 313

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E + +L   M   G+ KP+   Y  L+  + +  ++        +M A G  PDVVT+  
Sbjct: 314 ENAKELFVKMKANGH-KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     +  + D+A      M   G+ PN  T   +I G  + G+I++AL+   TM+  G
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVG 432

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V P    +N+ I  F +  +     E    MK   + P+++  +  + + +  G + + K
Sbjct: 433 VQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F+ + + G+ PD+  Y+++ K Y +  + ++A  LL  MI +G  P+V++  ++I   
Sbjct: 493 TMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G +D A ++FD+M +  +SP + T+ TL+ G  +  +  +A E+ + M      P  
Sbjct: 553 YKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNT 612

Query: 494 STFLLLAEARRATGLTKEAKRILSKI 519
            +F  L +        + A ++ SK+
Sbjct: 613 ISFNTLLDCFCKNDEVELALKMFSKM 638



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 223/481 (46%), Gaps = 39/481 (8%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           + SL E G+ +EA+ +FN L E G  P  VTY  ++   +   + +   +++S++  NG 
Sbjct: 479 LYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGC 538

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           +PD I  N++I++  ++G ++EA   F +MK+  L+PT  TYNTL+ G G  G+ +++++
Sbjct: 539 EPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIE 598

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           L + M  E    PN  ++N L+  +C    +  A  +  KM     KPDV+TYNT+    
Sbjct: 599 LFESMI-EKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART-MKEYGVHPN 317
            +  + + A     +++ + + P+  T   ++ G  K G+I +A+  AR  M +     N
Sbjct: 658 IKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVN 716

Query: 318 LVIFNLLIKG------------FVEIMDRDGV---DEVLA-------------------- 342
              +  L+ G            F E +  +G+   D  L                     
Sbjct: 717 RSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFD 776

Query: 343 -LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
              K+  ++P + +Y+ ++       + +K  ++F DM   G  PDA  +++L   + + 
Sbjct: 777 KFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKS 836

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            +  +  EL   MI     P+ + +  +IS      ++D+A++ F  +      P  +T+
Sbjct: 837 GKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTY 896

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             L+ G ++  +   A  + + M  +G  P  + F +L       G T+ A ++  ++ N
Sbjct: 897 GPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVN 956

Query: 522 K 522
           +
Sbjct: 957 E 957



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 111/455 (24%), Positives = 214/455 (47%), Gaps = 5/455 (1%)

Query: 71  TVRSMTKLMNSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           TV   T+  N ++E      K ++  A+F  + +   +  L TY T+  AL+I+     +
Sbjct: 117 TVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQM 176

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
            ++++++ + G   ++  +N +I+   +SG   EA++ + +M   GL P+  TY+ L+  
Sbjct: 177 TTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVA 236

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
            G     E  + LL  M   G ++PN+ T+ + +R       I EA+ +  +M   G  P
Sbjct: 237 LGKKRDSEMVMVLLKEMEDLG-LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGP 295

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           D+VTY  +  A    G+ + A+E+ V+M+ NG +P+      ++  +   G +     F 
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW 355

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             M+  G  P++V F +L+    +  D D       +M++  + P++ TY+T++     A
Sbjct: 356 SQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G ++   ++   M   G++P A+ Y+I    + +  E  KA E    M   G  PN+V  
Sbjct: 416 GRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVAC 475

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
              +      G +  A  +F+ + E+G++P+  T+  +M  YS+  Q   A  +L  M  
Sbjct: 476 NASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR 535

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            G  P       L ++    G   EA ++  ++K+
Sbjct: 536 NGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKD 570



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 180/362 (49%), Gaps = 2/362 (0%)

Query: 136  NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLIKGYGIAGKPE 194
            NG+  +  F   ++    +      A   F K  K+ G++PT ++YN LI         E
Sbjct: 746  NGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTE 805

Query: 195  ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            ++  L   M   G   P+  T+N+L+        ITE + +  +M +   KPD +TYN +
Sbjct: 806  KAWDLFKDMKNVG-CAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIV 864

Query: 255  ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             ++ A++   D+A +   ++  +  +P  RT G +I G  K G+++EA+R    M +YG 
Sbjct: 865  ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924

Query: 315  HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
             PN  IFN+LI G+ +I D +   ++   M    + PD+ +Y+ +++    AG +D+   
Sbjct: 925  KPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALY 984

Query: 375  IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
             F+++   G+ PD  AY+ +  G  + Q  E+A  L   M   G  P++  + +++    
Sbjct: 985  YFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLG 1044

Query: 435  SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
              G +++A  +++++   G+ P++ T+  L+ GYS +  P  A  + + M   G +P   
Sbjct: 1045 LAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIG 1104

Query: 495  TF 496
            T+
Sbjct: 1105 TY 1106



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 163/353 (46%), Gaps = 36/353 (10%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            T+ S   L+  L+E    ++A  +F ++   G  P   T+  LLA      +   +  + 
Sbjct: 787  TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELY 846

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++      PD+I +N VI++ ++S N+++A+D F+ +  S   PT  TY  LI G    
Sbjct: 847  KEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKV 906

Query: 191  GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            G+ EE+++L + MS  G  KPN   +N+L+  +    +   A  +  +M   G++PD+ +
Sbjct: 907  GRLEEAMRLFEEMSDYG-CKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKS 965

Query: 251  YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            Y  +       G  D+A     E++  G+ P+      II+G  K  +++EAL     M+
Sbjct: 966  YTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMR 1025

Query: 311  EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              G+ P                                   D+ TY+++M     AG ++
Sbjct: 1026 NRGIVP-----------------------------------DLYTYNSLMLNLGLAGMVE 1050

Query: 371  KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
            + K +++++  AG++PD   Y+ L +GY   + PE A  +   M+  G +PN+
Sbjct: 1051 QAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNI 1103



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 170/363 (46%), Gaps = 2/363 (0%)

Query: 161 AMDTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           A+  F+ + E   +  TT T N +++   +  K E+   + + M ++  ++ +L TY  +
Sbjct: 105 ALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKK-IIRRDLDTYLTI 163

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
            +A      + +   V++KM  +G   +  +YN +     Q+G   +A EV   M   G+
Sbjct: 164 FKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGL 223

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           +P+ +T   ++    K+   +  +   + M++ G+ PN+  F + I+        D   E
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +   M +    PD++TY+ +++A   AG ++  KE+F  M   G KPD   Y  L   + 
Sbjct: 284 IFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFN 343

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
              + +  +E    M   G+ P+VV FT ++   C     D A   FD M + G+ PNL 
Sbjct: 344 DFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLH 403

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+ TL+ G   A +   A ++L  M++ GV P   T+ +  +    +G T +A     K+
Sbjct: 404 TYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKM 463

Query: 520 KNK 522
           K K
Sbjct: 464 KAK 466



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/488 (21%), Positives = 214/488 (43%), Gaps = 41/488 (8%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            TV +   L++ L + G+ Q+A  +F ++IE    P+ +++ TLL              + 
Sbjct: 576  TVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMF 635

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            S++      PD + +N VI    +   +  A   F ++K+S + P   T  TL+ G    
Sbjct: 636  SKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKC 694

Query: 191  GKPEESVKLL-----------------DLM---------------SREGNVKPNLRTYNV 218
            G+  +++ +                  DLM               + E  +    R  + 
Sbjct: 695  GQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSF 754

Query: 219  L---VRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
            L   VR  C  K    A+ +  K     G+ P + +YN +     +    ++A ++  +M
Sbjct: 755  LIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDM 814

Query: 275  EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
            ++ G  P+  T  ++++ + K GKI E     + M      P+ + +N++I    +  + 
Sbjct: 815  KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNL 874

Query: 335  D-GVDEVLALMK-EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
            D  +D    L+  +FR  P   TY  +++  +  G +++   +F++M   G KP+   ++
Sbjct: 875  DKALDFFYDLVSSDFRPTPR--TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932

Query: 393  ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            IL  GY +  + E A +L   M+  G  P++  +T ++   C  G +D A+  F+++   
Sbjct: 933  ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992

Query: 453  GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            G+ P+   +  ++ G  ++++   A  +   M+  G+ P   T+  L       G+ ++A
Sbjct: 993  GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052

Query: 513  KRILSKIK 520
            KR+  +++
Sbjct: 1053 KRMYEELQ 1060



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 95/174 (54%), Gaps = 1/174 (0%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L+N   + G  + A  +F  ++  G +P L +YT L+  L +  R +      ++++  G
Sbjct: 934  LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            +DPD I +N +IN   +S  MEEA+  + +M+  G+ P   TYN+L+   G+AG  E++ 
Sbjct: 994  LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAK 1053

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
            ++ + +   G ++P++ TYN L+R +   +N   A+ V   M   G  P++ TY
Sbjct: 1054 RMYEELQLAG-LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 215/445 (48%), Gaps = 37/445 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ ++T L+N    +     A ++   +++ G +P++VT+ TL+    I    +   +  
Sbjct: 89  SIATLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFR 148

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY--- 187
             +   G   D   + ++IN   ++G   +A+    KM+E  + P   TY+T+I G    
Sbjct: 149 LDLMAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKD 208

Query: 188 ----------------GI----------------AGKPEESVKLLDLMSREGNVKPNLRT 215
                           GI                 G+  E+ +LL +M R GN+ P+  T
Sbjct: 209 RLIADALRLFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVR-GNINPDDYT 267

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           +N+LV A C E  I EA  V   M   G KPD+VTYN +   +  +    +A E+   M 
Sbjct: 268 FNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMV 327

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
             G++P+     ++I+GYCK   + EA+   + ++   + PNL  +N LI G  ++    
Sbjct: 328 KRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMS 387

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
            V E++  M +   +PD++TY+  ++A+  +   +K   +F  + + GI PD + Y ++ 
Sbjct: 388 CVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIV 446

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
           + + + ++ + AEE L  ++  G  PNV  +T +I+  C D S D A+ +  KM ++   
Sbjct: 447 ENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCP 506

Query: 456 PNLKTFETLMWGYSEARQPWRAEEI 480
           P+  TFET++    E  +  +AE++
Sbjct: 507 PDAVTFETIIGALQERNETDKAEKL 531



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 228/488 (46%), Gaps = 19/488 (3%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL+ +++  G    A ++F+ L   G  PS+ T T L+     Q   +   S++  + + 
Sbjct: 60  KLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILKM 119

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  P+ + FN +IN F  +G + +AM     +   G      +Y +LI G    G+  ++
Sbjct: 120 GFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRDA 179

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++LL  M  E  V+PNL TY+ ++   C ++ I +A  +   + + G+  DVV YN++  
Sbjct: 180 LQLLQKME-EDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIH 238

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
                G+  +A  ++  M    + P+  T  I++   CKEG+I EA      M + G  P
Sbjct: 239 GCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKP 298

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++V +N L++GF    +     E+   M +  + PDV+ Y+ ++N +     +D+   +F
Sbjct: 299 DIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLF 358

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            ++    + P+   Y+ L  G  +       +EL+  M + G  P++V +   +  +C  
Sbjct: 359 KEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKS 418

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
              ++AI +F ++ + G+ P+   ++ ++  + +  +   AEE LQ +   G  P   T+
Sbjct: 419 KPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTY 477

Query: 497 LLLAEARRATGLTKEAKRILSKIKNKE----------------RTNEMEAEEDIPVESLE 540
            ++  A        EA  +LSK+ + +                  NE +  E + +E +E
Sbjct: 478 TIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIE 537

Query: 541 R-LYHKEA 547
           R L + EA
Sbjct: 538 RGLVNDEA 545



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 178/364 (48%), Gaps = 2/364 (0%)

Query: 140 PDSIF-FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           P  IF F+ ++ A    G+   A+  F ++   G+TP+ +T   LI  Y        +  
Sbjct: 52  PPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFS 111

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           LL  + + G  +PN+ T+N L+  +C    +++A      + A G   D  +Y ++    
Sbjct: 112 LLGTILKMG-FQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGL 170

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
            +NG+   A +++ +ME + V+PN  T   +I G CK+  I +ALR    +   G+  ++
Sbjct: 171 CKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDV 230

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           V +N LI G   +        +L +M    +NPD  T++ +++A    G + + + +F  
Sbjct: 231 VAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAV 290

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M K G KPD   Y+ L +G+       +A EL   M++ G  P+V+ +  +I+G+C    
Sbjct: 291 MMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDM 350

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +D A+ +F ++    + PNL T+ +L+ G  +  +    +E++  M   G  P   T+ +
Sbjct: 351 VDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNI 410

Query: 499 LAEA 502
             +A
Sbjct: 411 FLDA 414



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/316 (25%), Positives = 150/316 (47%), Gaps = 2/316 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++     G+ +EA  +   ++ G   P   T+  L+ AL  + R      + +
Sbjct: 230 VVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFA 289

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G  PD + +NA++  F  S N+ EA + F +M + GL P    YN LI GY    
Sbjct: 290 VMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKID 349

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E++ L   + R  N+ PNL TYN L+   C    ++    ++ +M   G  PD+VTY
Sbjct: 350 MVDEAMVLFKEI-RCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTY 408

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N    A+ ++   ++A  +  ++   G+ P+     +I+  +CK  K+K A    + +  
Sbjct: 409 NIFLDAFCKSKPYEKAISLFRQIVQ-GIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLI 467

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           +G  PN+  + ++I    +    D    +L+ M +    PD +T+ TI+ A       DK
Sbjct: 468 HGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDK 527

Query: 372 CKEIFDDMGKAGIKPD 387
            +++  +M + G+  D
Sbjct: 528 AEKLRLEMIERGLVND 543



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 76/365 (20%), Positives = 157/365 (43%), Gaps = 36/365 (9%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           +++ + +F +M      P    ++ L+      G    ++ L   +  +G + P++ T  
Sbjct: 36  VDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKG-ITPSIATLT 94

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +L+  +C++ +++ A++++  +   G +P++VT+NT+   +  NG   +A    +++   
Sbjct: 95  ILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAK 154

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G   +  + G +I+G CK G+ ++AL                                  
Sbjct: 155 GYPLDEFSYGSLINGLCKNGQTRDAL---------------------------------- 180

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            ++L  M+E  V P++ITYST+++       +     +F  +   GI  D  AY+ L  G
Sbjct: 181 -QLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIHG 239

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
                +  +A  LL  M+    +P+   F  ++   C +G +  A  VF  M + G  P+
Sbjct: 240 CCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPD 299

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + T+  LM G+  +     A E+   M   G+ P    + +L        +  EA  +  
Sbjct: 300 IVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFK 359

Query: 518 KIKNK 522
           +I+ K
Sbjct: 360 EIRCK 364


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 222/454 (48%), Gaps = 10/454 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T +M  L    +  EA A+  ++   G +  +VTY TL+  L      ++   ++ ++
Sbjct: 125 SYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEM 184

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G+ P+ + ++ ++  +  SG  ++    F  M   G+ P    +  LI      GK 
Sbjct: 185 CGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKT 244

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ K+ D+M + G ++PN+ TYNVL+ + C E ++ EA  +  +M   G+ PDVVTYNT
Sbjct: 245 GKAAKVKDMMVQRG-LEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNT 303

Query: 254 IATAYAQNGEADQAEEVIVEMEHNG--VQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +    +   E D+A   + EM      V+P+  T   +I G CK G++ +A++    M E
Sbjct: 304 LIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAE 363

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGF 368
            G   NLV +N LI GF+ +     V   + LM E  ++   PD  TYS ++N +S    
Sbjct: 364 RGCMCNLVTYNYLIGGFLRV---HKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWE 420

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D+ ++    M + GIK +   Y  L     ++   E+A  L   M +     + + ++T
Sbjct: 421 VDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYST 479

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G C  G M    ++   M + G++P+  T+  L+  Y++      AE +L+ M A G
Sbjct: 480 MIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASG 539

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             P  + F  L +   A G T +  +++ +++ K
Sbjct: 540 FVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAK 573



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 210/416 (50%), Gaps = 24/416 (5%)

Query: 55  QPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL 114
           QP      C+ +  CR+              G+ Q+   +F ++   G KP ++ +T L+
Sbjct: 190 QPNVVVYSCLLRGYCRS--------------GRWQDVGKVFEDMSRRGIKPDVIMFTGLI 235

Query: 115 AALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT 174
             L  + +      +   + + G++P+ + +N +IN+  + G++ EA+    +M + G+ 
Sbjct: 236 DDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVA 295

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLD-LMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
           P   TYNTLI G     + +E++  L+ ++  +  V+P++ T+N ++   C    +T+A 
Sbjct: 296 PDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAV 355

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
            V   MA  G   ++VTYN +   + +  +   A  ++ E+  +G++P+  T  I+I+G+
Sbjct: 356 KVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGF 415

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE--IMDRDGVDEVLALMKEFRVNP 351
            K  ++  A +F  TM++ G+   L  +  L+    +  +M+R      + L  E   N 
Sbjct: 416 SKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMER-----AMGLFNEMDKNC 470

Query: 352 --DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
             D I YST+++    +G M   K++  DM   G+ PDA  YS+L   Y +  + E+AE 
Sbjct: 471 GLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAER 530

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +L  M  SGF P+V +F ++I G+ ++G  D+ +++  +M    V+ + K   T++
Sbjct: 531 VLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/327 (28%), Positives = 160/327 (48%), Gaps = 6/327 (1%)

Query: 179 TYNTLIKGYGIAGKP--EESVKLLDLMSREGN--VKPNLRTYNVLVRAWCNEKNITEAWN 234
           +YNT++      G     ++  LL  MSRE +   +PN  +Y  ++R  C  +   EA  
Sbjct: 85  SYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGEAVA 144

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           ++  M ASG++ DVVTY T+        E D A E++ EM  +GVQPN      ++ GYC
Sbjct: 145 LLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLRGYC 204

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           + G+ ++  +    M   G+ P++++F  LI    +        +V  +M +  + P+V+
Sbjct: 205 RSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVV 264

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           TY+ ++N+    G + +   +  +M   G+ PD   Y+ L  G     E ++A   L  M
Sbjct: 265 TYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEM 324

Query: 415 IESG--FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
           I+      P+VV F ++I G C  G M +A++V + M E G   NL T+  L+ G+    
Sbjct: 325 IQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVH 384

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLL 499
           +   A  ++  +   G+ P   T+ +L
Sbjct: 385 KVKMAMNLMDELAISGLEPDSFTYSIL 411



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 171/357 (47%), Gaps = 37/357 (10%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++ L + GK  +A  + + +++ G +P++VTY  L+ +L  +       ++  ++++
Sbjct: 232 TGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDD 291

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM--KESGLTPTTSTYNTLIKGYGIAGKP 193
            G+ PD + +N +I   S    M+EAM    +M   ++ + P   T+N++I G    G+ 
Sbjct: 292 KGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRM 351

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++VK+ ++M+  G +  NL TYN L+  +     +  A N+M ++A SG++PD  TY+ 
Sbjct: 352 TQAVKVREMMAERGCM-CNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSI 410

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPN---------------------------GRTC 286
           +   +++  E D+AE+ +  M   G++                              + C
Sbjct: 411 LINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNC 470

Query: 287 GI-------IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           G+       +I G CK G +K   +  + M + G+ P+ V +++LI  + ++ D +  + 
Sbjct: 471 GLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAER 530

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
           VL  M      PDV  + +++  +S  G  DK  ++  +M    +  D    S + +
Sbjct: 531 VLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTIIR 587



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 140/278 (50%), Gaps = 16/278 (5%)

Query: 229 ITEAWNVMHKMAASGMKPDV---VTYNTIATAYAQNG--EADQAEEVIVEME---HNGVQ 280
           +TEA +++  +      PDV   V+YNT+  A  + G     QA  ++V+M    H   +
Sbjct: 67  VTEACSLLSAL------PDVRDAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAAR 120

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           PN  +   ++ G C   +  EA+   R+M+  GV  ++V +  LI+G  +  + D   E+
Sbjct: 121 PNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALEL 180

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L  M    V P+V+ YS ++  +  +G      ++F+DM + GIKPD   ++ L     +
Sbjct: 181 LDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCK 240

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
           E +  KA ++   M++ G  PNVV +  +I+  C +GS+  A+ +  +M + GV+P++ T
Sbjct: 241 EGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVT 300

Query: 461 FETLMWGYSEARQPWRAEEILQ--IMKAFGVHPQKSTF 496
           + TL+ G S   +   A   L+  I     V P   TF
Sbjct: 301 YNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTF 338



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 119/255 (46%), Gaps = 2/255 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++ L + G+  +A  +   + E G   +LVTY  L+       +     ++M 
Sbjct: 335 VVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMD 394

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G++PDS  ++ +IN FS+   ++ A      M++ G+      Y  L+      G
Sbjct: 395 ELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQG 454

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E ++ L + M +  N   +   Y+ ++   C   ++     ++  M   G+ PD VTY
Sbjct: 455 MMERAMGLFNEMDK--NCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTY 512

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +   YA+ G+ ++AE V+ +M  +G  P+      +I GY  EG+  + L+    M+ 
Sbjct: 513 SMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRA 572

Query: 312 YGVHPNLVIFNLLIK 326
             V  +  I + +I+
Sbjct: 573 KNVAFDPKIISTIIR 587


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 197/401 (49%), Gaps = 36/401 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T +++     G+ Q+   +   +   G KP+L TY++++  L    +      ++ 
Sbjct: 145 VVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLR 204

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G+ PD + +  +I+ F + GN + A   F +M+   + P +  ++ LI G   +G
Sbjct: 205 EMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSG 264

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  E+ KL + M ++G  +P+  TY  L+  +C    + +A+ + ++M   G+ P+VVTY
Sbjct: 265 KVVEADKLFNEMIKKG-FEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTY 323

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +A    ++GE D A E++ EM   G+Q N  T   I++G CK G I +A++    MKE
Sbjct: 324 TALADGLCKSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKE 383

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+H                                   PD ITY+T+M+A+   G M K
Sbjct: 384 AGLH-----------------------------------PDTITYTTLMDAYYKTGEMVK 408

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +E+  +M   G++P    +++L  G     + E  E LL  M+E G  PN   + +I+ 
Sbjct: 409 ARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMK 468

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            +C   +M  + E++  MC  GV P+  T+  L+ G+ +AR
Sbjct: 469 QYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKAR 509



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/404 (27%), Positives = 201/404 (49%), Gaps = 1/404 (0%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           +Y  L+ +L    +    H ++ ++E  G  PD + +  +I+ +   G +++ +    +M
Sbjct: 112 SYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTIIDGYCHVGELQKVVQLVKEM 171

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
           +  GL P   TY+++I     +GK  E  K+L  M + G V P+   Y  L+  +C   N
Sbjct: 172 QLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRG-VFPDHVIYTTLIDGFCKLGN 230

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
              A+ +  +M A  + PD + ++ +    + +G+  +A+++  EM   G +P+  T   
Sbjct: 231 TQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFEPDEVTYTA 290

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +I GYCK G++K+A      M + G+ PN+V +  L  G  +  + D  +E+L  M    
Sbjct: 291 LIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANELLHEMCRKG 350

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           +  ++ TY+TI+N    AG + +  ++ ++M +AG+ PD   Y+ L   Y +  E  KA 
Sbjct: 351 LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTGEMVKAR 410

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           ELL  M++ G  P VV F  +++G C  G ++    +   M E G+ PN  T+ ++M  Y
Sbjct: 411 ELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYNSIMKQY 470

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
                   + EI + M A GV P  +T+ +L +        KEA
Sbjct: 471 CIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEA 514



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/388 (29%), Positives = 199/388 (51%), Gaps = 6/388 (1%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G DP    F+       E+G + EA   F K+   G+  +  + N  +    ++ K +  
Sbjct: 36  GSDPH--VFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTC--LSSKRDML 91

Query: 197 VKLLDLMSR--EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
             +L + S   +  V  N  +YN+L+ +      I EA +++ +M   G  PDVV+Y TI
Sbjct: 92  GMVLKVFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIPDVVSYTTI 151

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              Y   GE  +  +++ EM+  G++PN  T   II   CK GK+ E  +  R M + GV
Sbjct: 152 IDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGV 211

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P+ VI+  LI GF ++ +     ++ + M+   + PD I +S ++   S +G + +  +
Sbjct: 212 FPDHVIYTTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADK 271

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +F++M K G +PD   Y+ L  GY +  E +KA  L   M++ G  PNVV +T +  G C
Sbjct: 272 LFNEMIKKGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLC 331

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G +D A E+  +MC  G+  N+ T+ T++ G  +A    +A ++++ MK  G+HP   
Sbjct: 332 KSGELDTANELLHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTI 391

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
           T+  L +A   TG   +A+ +L ++ ++
Sbjct: 392 TYTTLMDAYYKTGEMVKARELLREMLDR 419



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 187/376 (49%), Gaps = 1/376 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++   + G  Q A  +F+ +      P  + ++ L+  L+   +      + +++ +
Sbjct: 219 TTLIDGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIK 278

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G +PD + + A+I+ + + G M++A     +M + GLTP   TY  L  G   +G+ + 
Sbjct: 279 KGFEPDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDT 338

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +LL  M R+G ++ N+ TYN +V   C   NI +A  +M +M  +G+ PD +TY T+ 
Sbjct: 339 ANELLHEMCRKG-LQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLM 397

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            AY + GE  +A E++ EM   G+QP   T  ++++G C  GK+++  R  + M E G+ 
Sbjct: 398 DAYYKTGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIM 457

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN   +N ++K +    +     E+   M    V PD  TY+ ++     A  M +   +
Sbjct: 458 PNAATYNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFL 517

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
             +M +      A +Y+ L KG+ + ++  +A +L   M   G   +  I+   +     
Sbjct: 518 HKEMVEKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYE 577

Query: 436 DGSMDRAIEVFDKMCE 451
           +G+M+  +E+ D+  E
Sbjct: 578 EGNMETTLELCDEAIE 593



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/245 (23%), Positives = 110/245 (44%), Gaps = 6/245 (2%)

Query: 67  ESCR-----TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           E CR      + +   ++N L + G   +A  +   + E G  P  +TYTTL+ A     
Sbjct: 345 EMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYKTG 404

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
                  ++ ++ + G+ P  + FN ++N    SG +E+       M E G+ P  +TYN
Sbjct: 405 EMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAATYN 464

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           +++K Y I      S ++   M  +G V P+  TYN+L++  C  +N+ EAW +  +M  
Sbjct: 465 SIMKQYCIRNNMRISTEIYRGMCAQG-VVPDSNTYNILIKGHCKARNMKEAWFLHKEMVE 523

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
                   +YN +   + +  +  +A ++  EM   G+  +     + +    +EG ++ 
Sbjct: 524 KRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNMET 583

Query: 302 ALRFA 306
            L   
Sbjct: 584 TLELC 588



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/234 (24%), Positives = 108/234 (46%), Gaps = 14/234 (5%)

Query: 304 RFARTMKEYGVHPNL--VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           R   T K++G  P++  V F +L++  +    R   D++L            +  + + +
Sbjct: 27  RLIYTYKDWGSDPHVFDVFFQVLVEAGLLNEARKFFDKLLNYGVALSAGSCNLYLTCLSS 86

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                G + K   +F +  + G+  +  +Y+IL     R  +  +A  LLM M   G  P
Sbjct: 87  KRDMLGMVLK---VFSEFPQLGVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCIP 143

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +VV +TTII G+C  G + + +++  +M   G+ PNL T+ +++    ++ +    E++L
Sbjct: 144 DVVSYTTIIDGYCHVGELQKVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVL 203

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP 535
           + M   GV P    +  L +     G T+ A ++ S         EMEA E +P
Sbjct: 204 REMMKRGVFPDHVIYTTLIDGFCKLGNTQAAYKLFS---------EMEAREIVP 248


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 198/401 (49%), Gaps = 7/401 (1%)

Query: 88  PQEAQAIFNNLIEGGHKPSLV-----TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS 142
           P  A A+FN        P ++     TY  L+   T   R     +   Q+   G+  D+
Sbjct: 89  PALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDA 148

Query: 143 IFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           I  + ++  F E+   +EA+D    +  E G  P   +YN L+K     GK  ++  LL 
Sbjct: 149 IIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLR 208

Query: 202 LMSREGNV-KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
           +M+  G V  P++  YN ++  +  E ++ +A ++  +M   G+ PD+VTY+++  A  +
Sbjct: 209 MMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCK 268

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
               D+AE  + +M + GV P+  T   +I GY   G+ KEA+R  + M+   + P++V 
Sbjct: 269 ARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVA 328

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
            N L+    +        +V   M     NPDV +Y+ ++N ++T G +    ++FD M 
Sbjct: 329 LNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML 388

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             GI PD + +++L K Y      +KA  +   M + G  P+VV + T+I+  C  G MD
Sbjct: 389 GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMD 448

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            A+E F++M + GV P+   +  L+ G+       +A+E++
Sbjct: 449 DAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELI 489



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 216/456 (47%), Gaps = 8/456 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH--KPSLVTYTTLLAALTIQKRFNSIHSI 129
           V S   L+ SL  +GK  +A  +   + EGG    P +V Y T++     +   N    +
Sbjct: 184 VFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDL 243

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ + G+ PD + +++V++A  ++  M++A     +M   G+ P   TYN LI GY  
Sbjct: 244 FKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSS 303

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+ +E+V++   M R+ ++ P++   N L+ + C    I EA +V   MA  G  PDV 
Sbjct: 304 TGQWKEAVRVFKEMRRQ-SILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 362

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +Y  +   YA  G      ++   M  +G+ P+  T  ++I  Y   G + +A+     M
Sbjct: 363 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 422

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +++GV P++V +  +I     I   D   E    M +  V PD   Y  ++  + T G +
Sbjct: 423 RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSL 482

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            K KE+  ++   G++ D   +  +     +      A+ +    +  G HP+ V++  +
Sbjct: 483 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 542

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+C  G M++A+ VFD M   G+ PN+  + TL+ GY +  +      + + M   G+
Sbjct: 543 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI 602

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
            P    + ++ +     GL +  + + +K+K  E T
Sbjct: 603 KPSTILYNIIID-----GLFEAGRTVPAKVKFHEMT 633



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 208/436 (47%), Gaps = 1/436 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+ +EA  +F  +      P +V   TL+ +L    +      +   +   G +PD   +
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             ++N ++  G + +  D F  M   G+ P   T+N LIK Y   G  ++++ + + M R
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM-R 423

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +  VKP++ TY  ++ A C    + +A    ++M   G+ PD   Y+ +   +  +G   
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A+E+I E+ +NG++ +    G II+  CK G++ +A          G+HP+ V++N+L+
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G+  +   +    V   M    + P+V+ Y T++N +   G +D+   +F +M + GIK
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P    Y+I+  G         A+     M ESG   N   ++ ++ G   +   D AI +
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F ++    V  ++ T  T++ G  + R+   A+++   +   G+ P   T+ ++      
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLK 723

Query: 506 TGLTKEAKRILSKIKN 521
            GL +EA+ + S ++N
Sbjct: 724 EGLVEEAEDMFSSMQN 739



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 213/483 (44%), Gaps = 36/483 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++   + G   +A  +F  +++ G  P LVTY++++ AL   +  +   + + 
Sbjct: 221 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLR 280

Query: 132 QVEENGMDPDSIFFNAVINAFSESGN---------------------------------- 157
           Q+   G+ PD+  +N +I  +S +G                                   
Sbjct: 281 QMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYG 340

Query: 158 -MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            ++EA D F  M   G  P   +Y  ++ GY   G   +   L DLM  +G + P++ T+
Sbjct: 341 KIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG-IAPDIYTF 399

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           NVL++A+ N   + +A  + ++M   G+KP VVTY T+  A  + G+ D A E   +M  
Sbjct: 400 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMID 459

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            GV P+      +I G+C  G + +A      +   G+  ++V F  +I    ++     
Sbjct: 460 QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMD 519

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              +  L     ++PD + Y+ +M+ +   G M+K   +FD M  AGI+P+   Y  L  
Sbjct: 520 AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVN 579

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           GY +    ++   L   M++ G  P+ +++  II G    G    A   F +M E G++ 
Sbjct: 580 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 639

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N  T+  ++ G  + R    A  + + ++A  V     T   +      T   +EAK + 
Sbjct: 640 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699

Query: 517 SKI 519
           + I
Sbjct: 700 ASI 702



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 209/424 (49%), Gaps = 7/424 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++  LM SL + GK +EA+ +F+ +   G  P + +YT +L     +     +  +  
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G+ PD   FN +I A++  G +++AM  F +M++ G+ P   TY T+I      G
Sbjct: 386 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +++++  + M  +G V P+   Y+ L++ +C   ++ +A  ++ ++  +GM+ D+V +
Sbjct: 446 KMDDAMEKFNQMIDQG-VVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFF 504

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            +I     + G    A+ +     + G+ P+     +++ GYC  GK+++ALR    M  
Sbjct: 505 GSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 564

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            G+ PN+V +  L+ G+ +I     +DE L+L +E     + P  I Y+ I++    AG 
Sbjct: 565 AGIEPNVVGYGTLVNGYCKI---GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 621

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
               K  F +M ++GI  +   YSI+ +G  + +  ++A  L   +       +++   T
Sbjct: 622 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 681

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I+G      ++ A ++F  +   G+ P   T+  ++    +      AE++   M+  G
Sbjct: 682 MIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAG 741

Query: 489 VHPQ 492
             P 
Sbjct: 742 CEPD 745



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 190/386 (49%), Gaps = 2/386 (0%)

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P S  +  +++  + +   E A+  F ++  +GL       + L+KG+  A + +E++
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG--MKPDVVTYNTIA 255
            +L   + E    P++ +YN+L+++ CN+    +A +++  MA  G    PDVV YNT+ 
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + + G+ ++A ++  EM   G+ P+  T   ++   CK   + +A  F R M   GV 
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+   +N LI G+           V   M+   + PDV+  +T+M +    G + + +++
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           FD M   G  PD  +Y+I+  GY  +       +L   M+  G  P++  F  +I  + +
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 408

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G +D+A+ +F++M +HGV P++ T+ T++       +   A E    M   GV P K  
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 496 FLLLAEARRATGLTKEAKRILSKIKN 521
           +  L +     G   +AK ++S+I N
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMN 494



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 179/373 (47%), Gaps = 7/373 (1%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   +A  IFN + + G KP +VTY T++AAL    + +      +Q+ + G+ PD   +
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           + +I  F   G++ +A +   ++  +G+      + ++I      G+  ++  + DL   
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G + P+   YN+L+  +C    + +A  V   M ++G++P+VV Y T+   Y + G  D
Sbjct: 530 VG-LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 588

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +   +  EM   G++P+     III G  + G+   A      M E G+  N   +++++
Sbjct: 589 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648

Query: 326 KGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +G  +       DE + L KE R   V  D+IT +T++        +++ K++F  + ++
Sbjct: 649 RGLFK---NRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ P A  YSI+    ++E   E+AE++  +M  +G  P+  +   ++        + RA
Sbjct: 706 GLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765

Query: 443 IEVFDKMCEHGVS 455
                K+ E   S
Sbjct: 766 GAYLSKIDERNFS 778



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 123/249 (49%), Gaps = 1/249 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N+L + G+  +AQ IF+  +  G  P  V Y  L+    +  +      +   +   G
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++P+ + +  ++N + + G ++E +  F +M + G+ P+T  YN +I G   AG+   + 
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M+  G +  N  TY++++R     +   EA  +  ++ A  +K D++T NT+   
Sbjct: 627 VKFHEMTESG-IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 685

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             Q    ++A+++   +  +G+ P   T  I+I+   KEG ++EA     +M+  G  P+
Sbjct: 686 MFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPD 745

Query: 318 LVIFNLLIK 326
             + N +++
Sbjct: 746 SRLLNHVVR 754



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 144/335 (42%), Gaps = 29/335 (8%)

Query: 192 KPEESVKLLDLMSREGNVKPNL-RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           +PEE+  LLD + R G   P L R  N  + A     +           AA G  P    
Sbjct: 46  RPEEAHDLLDELQRRGT--PVLDRDLNGFLAALARAPS----------SAACGSGP---- 89

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
              +A A   N  A +A+   V      + P   T  I++    +  + + AL F   + 
Sbjct: 90  --ALAVALF-NRAASRAQGPRV------LSPTSYTYAILMDCCTRAHRPELALAFFGQLL 140

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRD-GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
             G+  + +I + L+KGF E    D  +D +L    E    PDV +Y+ ++ +    G  
Sbjct: 141 RTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKS 200

Query: 370 DKCKEIFDDMGKAG--IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +  ++   M + G    PD  AY+ +  G+ +E +  KA +L   M++ G  P++V ++
Sbjct: 201 GQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYS 260

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +++   C   +MD+A     +M   GV P+  T+  L++GYS   Q   A  + + M+  
Sbjct: 261 SVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQ 320

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            + P       L  +    G  KEA+ +   +  K
Sbjct: 321 SILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMK 355



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 120/263 (45%), Gaps = 36/263 (13%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LM+     GK ++A  +F+ ++  G +P++V Y TL+       R +   S+  ++ + G
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P +I +N +I+   E+G    A   F +M ESG+     TY+ +++G       +E++
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   + R  NVK ++ T N ++      + + EA ++   ++ SG+ P  VTY+ + T 
Sbjct: 662 FLFKEL-RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITN 720

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGR--------------------------------- 284
             + G  ++AE++   M++ G +P+ R                                 
Sbjct: 721 LLKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 780

Query: 285 --TCGIIISGYCKEGKIKEALRF 305
             T  +++  +  +G  +E +RF
Sbjct: 781 HLTAMLLVDLFSSKGTCREQIRF 803



 Score = 40.0 bits (92), Expect = 3.7,   Method: Compositional matrix adjust.
 Identities = 24/127 (18%), Positives = 53/127 (41%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  ++  + +  + +EA+ +F ++   G  P  VTY+ ++  L  +        + S +
Sbjct: 678 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSM 737

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +  G +PDS   N V+    +   +  A     K+ E   +    T   L+  +   G  
Sbjct: 738 QNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTC 797

Query: 194 EESVKLL 200
            E ++ L
Sbjct: 798 REQIRFL 804


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 221/453 (48%), Gaps = 7/453 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L   GK  EA  +F+ +I+ G +P++VTY TL+  L      ++   ++  +
Sbjct: 128 TFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 187

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+    PD + + ++I++  +   + EA + F +M   G++P   TY +L+       + 
Sbjct: 188 EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW 247

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +    LL+ M     + P++  ++ +V A C E  +TEA  ++  M   G++PDVVTY T
Sbjct: 248 KHVTTLLNQMV-NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 306

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +    E D+A +V   M   G  P+  +   +I+GYCK  KI +A+     M    
Sbjct: 307 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 366

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMD 370
             P+   +N L+ G   +     + + +AL  E       PD++TYS ++++      ++
Sbjct: 367 WIPDTKTYNTLMHGLCHV---GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNCHLE 423

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +   +  + + PD   Y+I+  G  R  E E A +L   +   G HP+V  +  +I
Sbjct: 424 EAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 483

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C  G ++ A ++F +M  +  SP+  T+ T+  G+ +  +  RA ++L+ M A G  
Sbjct: 484 HGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 543

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
              ST  LL E     GL + +  ++  + +++
Sbjct: 544 ADVSTTTLLVEMLSDDGLDQSSCFLMLSVLSED 576



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 209/434 (48%), Gaps = 1/434 (0%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            +A + FN L+     PS+V +  LL ++   K ++++ S+ +Q++  G+ P+    N +
Sbjct: 38  DDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNIL 97

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           IN+F     +  A     K+ + G  P  +T+ TLI+G  + GK  E++ L D M  EG 
Sbjct: 98  INSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG- 156

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            +PN+ TY  L+   C   N + A  ++  M     +PDVV Y +I  +  ++ +  +A 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            +  +M   G+ P+  T   ++   C   + K        M    + P++VIF+ ++   
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +        E++ +M +  V PDV+TY+T+M+       MD+  ++FD M + G  PD 
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 336

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
            +Y+ L  GY +  + +KA  L   M    + P+   + T++ G C  G +  AI +F +
Sbjct: 337 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M   G  P+L T+  L+    +      A  +L+ ++A  ++P    + ++ +     G 
Sbjct: 397 MVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 456

Query: 509 TKEAKRILSKIKNK 522
            + A+ + S + +K
Sbjct: 457 LEAARDLFSNLSSK 470



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 211/453 (46%), Gaps = 1/453 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++    KL+ S+ +        ++   +   G  P++ T   L+ +     R     S++
Sbjct: 55  SIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVL 114

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++ + G  PD   F  +I      G + EA+  F KM + G  P   TY TLI G    
Sbjct: 115 AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV 174

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    +++LL  M  +GN +P++  Y  ++ + C ++ +TEA+N+  +M   G+ PD+ T
Sbjct: 175 GNTSAAIRLLRSM-EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y ++  A     E      ++ +M ++ + P+      ++   CKEGK+ EA      M 
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + GV P++V +  L+ G     + D   +V  +M      PDVI+Y+T++N +     +D
Sbjct: 294 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 353

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +F++M +    PD   Y+ L  G       + A  L   M+  G  P++V ++ ++
Sbjct: 354 KAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 413

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C +  ++ A+ +   +    ++P+++ +  ++ G   A +   A ++   + + G+H
Sbjct: 414 DSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLH 473

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           P   T+ ++       GL  EA ++  ++   +
Sbjct: 474 PSVWTYNIMIHGLCKRGLLNEANKLFMEMDGND 506



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 8/203 (3%)

Query: 66  KESCR-----TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           +E CR       ++   LM+ L   G+ Q+A A+F+ ++  G  P LVTY+ LL +L   
Sbjct: 360 EEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKN 419

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
                  +++  +E + ++PD   +N +I+    +G +E A D F  +   GL P+  TY
Sbjct: 420 CHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTY 479

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           N +I G    G   E+ KL   M  +GN   P+  TYN + R +        A  ++ +M
Sbjct: 480 NIMIHGLCKRGLLNEANKL--FMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEM 537

Query: 240 AASGMKPDVVTYNTIATAYAQNG 262
            A G   DV T   +    + +G
Sbjct: 538 LARGFSADVSTTTLLVEMLSDDG 560


>gi|296084463|emb|CBI25022.3| unnamed protein product [Vitis vinifera]
          Length = 927

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 206/427 (48%), Gaps = 36/427 (8%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           + Y  ++ A           +++ ++EE G+D     ++ +++ ++  GN E+ +  F +
Sbjct: 374 IIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDR 433

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           +KE G TP+  +Y  LI  Y   GK  +++++  +M   G +K N++TY++L+  +   K
Sbjct: 434 LKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAG-IKHNMKTYSMLINGFVRLK 492

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           +   A+ V   +   G+KPDVV YN I  A+   G  D+A   + EM+    +P  RT  
Sbjct: 493 DWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFM 552

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
            II G+ + G ++ AL     M+  G  P +  FN LI G VE    +   E+L  M   
Sbjct: 553 PIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLA 612

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH------------------ 389
            ++P+  TY+TIM+ +++ G   K  E F  +   G++ D +                  
Sbjct: 613 GISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSA 672

Query: 390 -----------------AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
                             Y+IL  G+ R  +  +A EL+  M + G  P++  +T+ I+ 
Sbjct: 673 LAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINA 732

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G M RA +   +M   GV PN+KT+ TL+ G++ A  P +A +  Q MK+ G+ P 
Sbjct: 733 CCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPD 792

Query: 493 KSTFLLL 499
           K+ +  L
Sbjct: 793 KAVYHCL 799



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 189/369 (51%), Gaps = 1/369 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S   L+N  I+ GK  +A  +   +   G K ++ TY+ L+      K + +  ++ 
Sbjct: 442 SVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVF 501

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             V ++G+ PD + +N +I AF   GNM+ A+ T  +M++    PTT T+  +I G+  +
Sbjct: 502 EDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARS 561

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    ++++ D+M   G + P + T+N L+     +  + +A  ++ +M+ +G+ P+  T
Sbjct: 562 GDMRRALEIFDMMRWSGCI-PTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHT 620

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y TI   YA  G+  +A E   +++  G++ +  T   ++   CK G+++ AL   R M 
Sbjct: 621 YTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMS 680

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              +  N  ++N+LI G+    D     E++  MK+  V PD+ TY++ +NA   AG M 
Sbjct: 681 SQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQ 740

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  +   +M   G+KP+   Y+ L  G+ R   PEKA +    M  +G  P+  ++  ++
Sbjct: 741 RATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLM 800

Query: 431 SGWCSDGSM 439
           +   S  S+
Sbjct: 801 TSLLSRASV 809



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 199/426 (46%), Gaps = 2/426 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           +P+  QA+     E   KPS   +  ++     +   +        +   G++P S  + 
Sbjct: 249 EPENWQAVVQAF-ERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYT 307

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           ++I+A++   +MEEA+    KMKE G+  +  TY+ L+ G+      E +       ++E
Sbjct: 308 SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFK-EAKE 366

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            +   N   Y  ++ A C   N+T+A  ++ +M   G+   +  Y+T+   Y   G  ++
Sbjct: 367 RHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEK 426

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
              V   ++  G  P+  + G +I+ Y K GK+ +AL  ++ M+  G+  N+  +++LI 
Sbjct: 427 CLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLIN 486

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GFV + D      V   + +  + PDV+ Y+ I+ A+   G MD+      +M K   +P
Sbjct: 487 GFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRP 546

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
               +  +  G+ R  +  +A E+   M  SG  P V  F  +I G      M++A+E+ 
Sbjct: 547 TTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEIL 606

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           D+M   G+SPN  T+ T+M GY+      +A E    +K  G+     T+  L +A   +
Sbjct: 607 DEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKS 666

Query: 507 GLTKEA 512
           G  + A
Sbjct: 667 GRMQSA 672



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 166/336 (49%), Gaps = 6/336 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +++ + L+N  +       A A+F ++++ G KP +V Y  ++ A       +     + 
Sbjct: 478 MKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVK 537

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++++    P +  F  +I+ F+ SG+M  A++ F  M+ SG  PT  T+N LI G     
Sbjct: 538 EMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKC 597

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E++V++LD MS  G + PN  TY  ++  + +  +  +A+    K+   G++ DV TY
Sbjct: 598 QMEKAVEILDEMSLAG-ISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTY 656

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +  A  ++G    A  V  EM    +  N     I+I G+ + G + EA    + MK+
Sbjct: 657 EALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQ 716

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P++  +   I    +  D     + +  M+   V P++ TY+T+++ W+ A   +K
Sbjct: 717 EGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEK 776

Query: 372 CKEIFDDMGKAGIKPDAHAY-----SILAKGYVREQ 402
             + F +M  AG+KPD   Y     S+L++  V E+
Sbjct: 777 ALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEE 812



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 210/471 (44%), Gaps = 36/471 (7%)

Query: 85  RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
           RG    A+  F ++   G +P+   YT+L+ A  + +      S + +++E G++   + 
Sbjct: 281 RGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVT 340

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           ++ ++  F++  + E A   F + KE   T     Y  +I  +  A    ++  L+  M 
Sbjct: 341 YSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREME 400

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
            EG   P +  Y+ ++  +    N  +   V  ++   G  P V++Y  +   Y + G+ 
Sbjct: 401 EEGIDAP-IDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKV 459

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A EV   ME  G++ N +T  ++I+G+ +      A      + + G+ P++V++N +
Sbjct: 460 SKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNI 519

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I+ F  + + D     +  M++ R  P   T+  I++ ++ +G M +  EIFD M  +G 
Sbjct: 520 IRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGC 579

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P  H ++ L  G V + + EKA E+L  M  +G  PN   +TTI+ G+ S G   +A E
Sbjct: 580 IPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFE 639

Query: 445 VFDKMCEHGVSPNLKTFETLMW-----------------------------------GYS 469
            F K+   G+  ++ T+E L+                                    G++
Sbjct: 640 YFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWA 699

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
                W A E++Q MK  GV P   T+     A    G  + A + + +++
Sbjct: 700 RRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEME 750



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 165/344 (47%), Gaps = 5/344 (1%)

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
           +E  N +  +  F ++K+    P+   +  ++  Y   G    +    + M   G ++P 
Sbjct: 248 TEPENWQAVVQAFERIKK----PSRKEFGLMVTYYARRGDMHHARGTFESMRARG-IEPT 302

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
              Y  L+ A+   +++ EA + + KM   G++  +VTY+ +   +A+  +A+ A+    
Sbjct: 303 SHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFK 362

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           E +      N    G II  +C+   + +A    R M+E G+   + I++ ++ G+  I 
Sbjct: 363 EAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIG 422

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           + +    V   +KE    P VI+Y  ++N +   G + K  E+   M  AGIK +   YS
Sbjct: 423 NEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYS 482

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           +L  G+VR ++   A  +   +++ G  P+VV++  II  +C  G+MDRAI    +M + 
Sbjct: 483 MLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKE 542

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
              P  +TF  ++ G++ +    RA EI  +M+  G  P   TF
Sbjct: 543 RHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTF 586


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/483 (23%), Positives = 234/483 (48%), Gaps = 35/483 (7%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++ + ++ G   EA  + ++++  G   +L   T+L+    +Q    S   +++++
Sbjct: 230 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 289

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY------ 187
            E+G+ P+ + ++ +I+   ++GN+E+A + + +MK  G+  +  + N++++GY      
Sbjct: 290 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 349

Query: 188 -------------GIA---------------GKPEESVKLLDLMSREGNVKPNLRTYNVL 219
                        G+A               GK  E+  L D +  +G + PN+ +YN +
Sbjct: 350 QNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKG-ISPNVVSYNNI 408

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +   C + NI  A  V  +M  +G  P+ VT+  +   Y + G+ + A  +   M+   +
Sbjct: 409 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 468

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            P   T GIII G CK G+  E           G  P  + +N +I GF++  + +    
Sbjct: 469 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 528

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           V   M E  + P  +TY+++++ +     +D   ++ +DM + G+K D  AY  L  G+ 
Sbjct: 529 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 588

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           + ++ + A ELL  +  +G  PN  I+ ++I+G+ +  +++ AI+++ KM   G+  +LK
Sbjct: 589 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLK 648

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+ +L+ G  ++ +   A +I   M + G+ P      +L       G  + A++IL  +
Sbjct: 649 TYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDM 708

Query: 520 KNK 522
             K
Sbjct: 709 NGK 711



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 208/399 (52%), Gaps = 7/399 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L + GK  EA  +++ +I  G  P++V+Y  ++     +   N+   +  
Sbjct: 367 VFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYK 426

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +NG  P+++ F  +++ + + G++E A   F +MK++ + PT +T   +IKG   AG
Sbjct: 427 EMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAG 486

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E   L +    +G V P    YN ++  +  E NI  A NV  +M   G+ P  VTY
Sbjct: 487 RSFEGRDLFNKFVSQGFV-PTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTY 545

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++   + +    D A +++ +M+  G++ + +  G +I G+CK   +K A      ++ 
Sbjct: 546 TSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRG 605

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGF 368
            G+ PN  I+N +I GF  +   + V+E + L K+     +  D+ TY+++++    +G 
Sbjct: 606 AGLSPNRFIYNSMITGFKNM---NNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGR 662

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +    +I  +M   GI PD  A+++L  G   + + E A ++L  M      P+V+I+ T
Sbjct: 663 LLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNT 722

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           +I+G   +G++  A  + D+M + G+ P+  T++ L+ G
Sbjct: 723 LIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 761



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 199/433 (45%), Gaps = 2/433 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S+  ++   ++    Q A  +FN+ +E G   ++ T+ TLL+ L  + + N   ++ 
Sbjct: 332 SVYSLNSILEGYLKCQSWQNAFTMFNDALESGL-ANVFTFNTLLSWLCKEGKMNEACNLW 390

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +V   G+ P+ + +N +I       N+  A   + +M ++G TP   T+  L+ GY   
Sbjct: 391 DEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKK 450

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E +  +   M ++ N+ P   T  ++++  C      E  ++ +K  + G  P  + 
Sbjct: 451 GDIENAFSIFHRM-KDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMP 509

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNTI   + + G  + A  V  EM   G+ P+  T   +I G+CK   I  AL+    MK
Sbjct: 510 YNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMK 569

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+  ++  +  LI GF +  D     E+L  ++   ++P+   Y++++  +     ++
Sbjct: 570 RKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 629

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  +++  M   GI  D   Y+ L  G ++      A ++   M+  G  P+    T +I
Sbjct: 630 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLI 689

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G C+ G  + A ++ + M    + P++  + TL+ G+ +      A  +   M   G+ 
Sbjct: 690 NGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLV 749

Query: 491 PQKSTFLLLAEAR 503
           P   T+ +L   +
Sbjct: 750 PDNITYDILVNGK 762



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 108/474 (22%), Positives = 208/474 (43%), Gaps = 35/474 (7%)

Query: 83  IERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS 142
           I+ G   EA+  F      G +     Y+  +  L ++       S++ ++   G  P  
Sbjct: 169 IQEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPE 228

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
             F +VI A  + GN+ EA+     M   G +   +   +L+KGY + G    ++ L++ 
Sbjct: 229 GTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNE 288

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK----------------- 245
           +S  G V PN  TY+VL+   C   NI +A+    +M   G++                 
Sbjct: 289 ISESGLV-PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQ 347

Query: 246 -----------------PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
                             +V T+NT+ +   + G+ ++A  +  E+   G+ PN  +   
Sbjct: 348 SWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNN 407

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           II G+C++  I  A +  + M + G  PN V F +L+ G+ +  D +    +   MK+  
Sbjct: 408 IILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDAN 467

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           + P   T   I+     AG   + +++F+     G  P    Y+ +  G+++E     A 
Sbjct: 468 ILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLAS 527

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            +   M E G  P+ V +T++I G+C   ++D A+++ + M   G+  ++K + TL+ G+
Sbjct: 528 NVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGF 587

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            + R    A E+L  ++  G+ P +  +  +    +     +EA  +  K+ N+
Sbjct: 588 CKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNE 641



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 2/233 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++   +      A  + N++   G K  +  Y TL+     ++   S H +++++
Sbjct: 544 TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL 603

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+ P+   +N++I  F    N+EEA+D + KM   G+     TY +LI G   +G+ 
Sbjct: 604 RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRL 663

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +  +   M  +G + P+ R + VL+   CN+     A  ++  M    M P V+ YNT
Sbjct: 664 LYASDIHTEMLSKG-ILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNT 722

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK-EGKIKEALRF 305
           +   + + G   +A  +  EM   G+ P+  T  I+++G  K +G     L F
Sbjct: 723 LIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDGNFSRDLTF 775


>gi|225464410|ref|XP_002269194.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic [Vitis vinifera]
          Length = 929

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/427 (27%), Positives = 206/427 (48%), Gaps = 36/427 (8%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           + Y  ++ A           +++ ++EE G+D     ++ +++ ++  GN E+ +  F +
Sbjct: 395 IIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEKCLIVFDR 454

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           +KE G TP+  +Y  LI  Y   GK  +++++  +M   G +K N++TY++L+  +   K
Sbjct: 455 LKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAG-IKHNMKTYSMLINGFVRLK 513

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           +   A+ V   +   G+KPDVV YN I  A+   G  D+A   + EM+    +P  RT  
Sbjct: 514 DWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFM 573

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
            II G+ + G ++ AL     M+  G  P +  FN LI G VE    +   E+L  M   
Sbjct: 574 PIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEILDEMSLA 633

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH------------------ 389
            ++P+  TY+TIM+ +++ G   K  E F  +   G++ D +                  
Sbjct: 634 GISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSA 693

Query: 390 -----------------AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
                             Y+IL  G+ R  +  +A EL+  M + G  P++  +T+ I+ 
Sbjct: 694 LAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINA 753

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G M RA +   +M   GV PN+KT+ TL+ G++ A  P +A +  Q MK+ G+ P 
Sbjct: 754 CCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPD 813

Query: 493 KSTFLLL 499
           K+ +  L
Sbjct: 814 KAVYHCL 820



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/369 (27%), Positives = 189/369 (51%), Gaps = 1/369 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S   L+N  I+ GK  +A  +   +   G K ++ TY+ L+      K + +  ++ 
Sbjct: 463 SVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVF 522

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             V ++G+ PD + +N +I AF   GNM+ A+ T  +M++    PTT T+  +I G+  +
Sbjct: 523 EDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARS 582

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    ++++ D+M   G + P + T+N L+     +  + +A  ++ +M+ +G+ P+  T
Sbjct: 583 GDMRRALEIFDMMRWSGCI-PTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHT 641

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y TI   YA  G+  +A E   +++  G++ +  T   ++   CK G+++ AL   R M 
Sbjct: 642 YTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMS 701

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              +  N  ++N+LI G+    D     E++  MK+  V PD+ TY++ +NA   AG M 
Sbjct: 702 SQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQ 761

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  +   +M   G+KP+   Y+ L  G+ R   PEKA +    M  +G  P+  ++  ++
Sbjct: 762 RATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEKALKCFQEMKSAGLKPDKAVYHCLM 821

Query: 431 SGWCSDGSM 439
           +   S  S+
Sbjct: 822 TSLLSRASV 830



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/426 (25%), Positives = 199/426 (46%), Gaps = 2/426 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           +P+  QA+     E   KPS   +  ++     +   +        +   G++P S  + 
Sbjct: 270 EPENWQAVVQAF-ERIKKPSRKEFGLMVTYYARRGDMHHARGTFESMRARGIEPTSHVYT 328

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           ++I+A++   +MEEA+    KMKE G+  +  TY+ L+ G+      E +       ++E
Sbjct: 329 SLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFK-EAKE 387

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            +   N   Y  ++ A C   N+T+A  ++ +M   G+   +  Y+T+   Y   G  ++
Sbjct: 388 RHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIGNEEK 447

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
              V   ++  G  P+  + G +I+ Y K GK+ +AL  ++ M+  G+  N+  +++LI 
Sbjct: 448 CLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYSMLIN 507

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GFV + D      V   + +  + PDV+ Y+ I+ A+   G MD+      +M K   +P
Sbjct: 508 GFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKERHRP 567

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
               +  +  G+ R  +  +A E+   M  SG  P V  F  +I G      M++A+E+ 
Sbjct: 568 TTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKCQMEKAVEIL 627

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           D+M   G+SPN  T+ T+M GY+      +A E    +K  G+     T+  L +A   +
Sbjct: 628 DEMSLAGISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTYEALLKACCKS 687

Query: 507 GLTKEA 512
           G  + A
Sbjct: 688 GRMQSA 693



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 166/336 (49%), Gaps = 6/336 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +++ + L+N  +       A A+F ++++ G KP +V Y  ++ A       +     + 
Sbjct: 499 MKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVK 558

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++++    P +  F  +I+ F+ SG+M  A++ F  M+ SG  PT  T+N LI G     
Sbjct: 559 EMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTFNALILGLVEKC 618

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E++V++LD MS  G + PN  TY  ++  + +  +  +A+    K+   G++ DV TY
Sbjct: 619 QMEKAVEILDEMSLAG-ISPNEHTYTTIMHGYASLGDTGKAFEYFTKLKTEGLELDVYTY 677

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +  A  ++G    A  V  EM    +  N     I+I G+ + G + EA    + MK+
Sbjct: 678 EALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWARRGDVWEAAELMQQMKQ 737

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P++  +   I    +  D     + +  M+   V P++ TY+T+++ W+ A   +K
Sbjct: 738 EGVQPDIHTYTSFINACCKAGDMQRATKTIQEMEVVGVKPNIKTYTTLIHGWARASLPEK 797

Query: 372 CKEIFDDMGKAGIKPDAHAY-----SILAKGYVREQ 402
             + F +M  AG+KPD   Y     S+L++  V E+
Sbjct: 798 ALKCFQEMKSAGLKPDKAVYHCLMTSLLSRASVAEE 833



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 110/471 (23%), Positives = 210/471 (44%), Gaps = 36/471 (7%)

Query: 85  RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
           RG    A+  F ++   G +P+   YT+L+ A  + +      S + +++E G++   + 
Sbjct: 302 RGDMHHARGTFESMRARGIEPTSHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVT 361

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           ++ ++  F++  + E A   F + KE   T     Y  +I  +  A    ++  L+  M 
Sbjct: 362 YSILVGGFAKIADAEAADHWFKEAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREME 421

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
            EG   P +  Y+ ++  +    N  +   V  ++   G  P V++Y  +   Y + G+ 
Sbjct: 422 EEGIDAP-IDIYHTMMDGYTIIGNEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKV 480

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A EV   ME  G++ N +T  ++I+G+ +      A      + + G+ P++V++N +
Sbjct: 481 SKALEVSKMMEVAGIKHNMKTYSMLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNI 540

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I+ F  + + D     +  M++ R  P   T+  I++ ++ +G M +  EIFD M  +G 
Sbjct: 541 IRAFCGMGNMDRAIRTVKEMQKERHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGC 600

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P  H ++ L  G V + + EKA E+L  M  +G  PN   +TTI+ G+ S G   +A E
Sbjct: 601 IPTVHTFNALILGLVEKCQMEKAVEILDEMSLAGISPNEHTYTTIMHGYASLGDTGKAFE 660

Query: 445 VFDKMCEHGVSPNLKTFETLMW-----------------------------------GYS 469
            F K+   G+  ++ T+E L+                                    G++
Sbjct: 661 YFTKLKTEGLELDVYTYEALLKACCKSGRMQSALAVTREMSSQKIPRNTFVYNILIDGWA 720

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
                W A E++Q MK  GV P   T+     A    G  + A + + +++
Sbjct: 721 RRGDVWEAAELMQQMKQEGVQPDIHTYTSFINACCKAGDMQRATKTIQEME 771



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 165/344 (47%), Gaps = 5/344 (1%)

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
           +E  N +  +  F ++K+    P+   +  ++  Y   G    +    + M   G ++P 
Sbjct: 269 TEPENWQAVVQAFERIKK----PSRKEFGLMVTYYARRGDMHHARGTFESMRARG-IEPT 323

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
              Y  L+ A+   +++ EA + + KM   G++  +VTY+ +   +A+  +A+ A+    
Sbjct: 324 SHVYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVGGFAKIADAEAADHWFK 383

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           E +      N    G II  +C+   + +A    R M+E G+   + I++ ++ G+  I 
Sbjct: 384 EAKERHTTLNAIIYGNIIYAHCQACNMTQAEALVREMEEEGIDAPIDIYHTMMDGYTIIG 443

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           + +    V   +KE    P VI+Y  ++N +   G + K  E+   M  AGIK +   YS
Sbjct: 444 NEEKCLIVFDRLKECGFTPSVISYGCLINLYIKIGKVSKALEVSKMMEVAGIKHNMKTYS 503

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           +L  G+VR ++   A  +   +++ G  P+VV++  II  +C  G+MDRAI    +M + 
Sbjct: 504 MLINGFVRLKDWANAFAVFEDVVKDGLKPDVVLYNNIIRAFCGMGNMDRAIRTVKEMQKE 563

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
              P  +TF  ++ G++ +    RA EI  +M+  G  P   TF
Sbjct: 564 RHRPTTRTFMPIIHGFARSGDMRRALEIFDMMRWSGCIPTVHTF 607


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 235/476 (49%), Gaps = 14/476 (2%)

Query: 57  QTHCSFCMNKESCRTVRSM------------TKLMNSLIERGKPQEAQAIFNNLIEGGHK 104
            THCS     ++  T+ +M              L+N+   +G   EA+A+   + + G  
Sbjct: 212 HTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVA 271

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P+  TY TL++A            ++  +  NG +PD   +N +     ++G ++EA   
Sbjct: 272 PTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRL 331

Query: 165 FWKMKESG-LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
             +M+  G L P   TYNTL           ++++LL+ M RE  VK  L T+N++++  
Sbjct: 332 KDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEM-REKGVKATLVTHNIVIKGL 390

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C +  +  A   ++KMA  G+ PDV+TYNT+  A+ + G   +A  ++ EM   G++ + 
Sbjct: 391 CKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDT 450

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T   ++   CKE + +EA    ++  + G  P+ V +  ++  + +  + +    +   
Sbjct: 451 FTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDE 510

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M E ++ P + TY+T++   S  G + +  +  +++ + G+ PD   Y+I+   Y +E +
Sbjct: 511 MIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGD 570

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            E A +    M+E+ F P+VV   T+++G C +G +D+A+++F+   E G   ++ T+ T
Sbjct: 571 LENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNT 630

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           L+    +      A      M+A G+ P   T+ ++  A    G T+EA+ +L K+
Sbjct: 631 LIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKL 686



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/415 (26%), Positives = 202/415 (48%), Gaps = 42/415 (10%)

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAF--SESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +HS+  +V    + P     NAV++A   S S + + ++D F  +    L P   T+N L
Sbjct: 154 LHSLRRRVR---VRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLL 210

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           +  +   G   +++  L  M   G + P+  TYN L+ A C +  + EA  ++ +M   G
Sbjct: 211 VHTHCSKGTLADALSTLSTMQGFG-LSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDG 269

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE-- 301
           + P   TYNT+ +AYA+ G   QA +V+  M  NG +P+  T  ++ +G C+ GK+ E  
Sbjct: 270 VAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAF 329

Query: 302 ----------------------------------ALRFARTMKEYGVHPNLVIFNLLIKG 327
                                             ALR    M+E GV   LV  N++IKG
Sbjct: 330 RLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKG 389

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             +  + +G    L  M +  + PDVITY+T+++A   AG + K   + D+M + G+K D
Sbjct: 390 LCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLD 449

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
               + +     +E+  E+A+ LL +  + GF P+ V + T+++ +  + + + A+ ++D
Sbjct: 450 TFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWD 509

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           +M E  ++P++ T+ TL+ G S   +   A + L  +   G+ P  +T+ ++  A
Sbjct: 510 EMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHA 564



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/390 (24%), Positives = 184/390 (47%), Gaps = 1/390 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L + G+ + A    N + + G  P ++TY TL+ A          +++M ++   G
Sbjct: 386 VIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRG 445

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D+   N V+    +    EEA        + G  P   +Y T++  Y      E ++
Sbjct: 446 LKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPAL 505

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L D M  E  + P++ TYN L++       + EA + ++++   G+ PD  TYN I  A
Sbjct: 506 RLWDEMI-EKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHA 564

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G+ + A +   +M  N  +P+  TC  +++G C  GK+ +AL+   +  E G   +
Sbjct: 565 YCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVD 624

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ +N LI+   +  D D      A M+   + PD  TY+ +++A S AG  ++ + +  
Sbjct: 625 VITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLH 684

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            + ++G    + +  +L    V E E  K  +     +E+        +T +++G C+ G
Sbjct: 685 KLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTSG 744

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
               A  + D+M + G+S +  T+ TLM G
Sbjct: 745 QFKEAKAILDEMMQKGMSVDSSTYITLMEG 774



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 177/381 (46%), Gaps = 42/381 (11%)

Query: 63  CMNKES----CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT 118
           C+NK +       V +   L+++  + G   +A  + + ++  G K    T  T+L  L 
Sbjct: 402 CLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLC 461

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
            +KR+     ++    + G  PD + +  V+ A+ +  N E A+  + +M E  LTP+ S
Sbjct: 462 KEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSIS 521

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           TYNTLIKG    G+ +E++  L+ +  +G V P+  TYN+++ A+C E ++  A+   +K
Sbjct: 522 TYNTLIKGLSRMGRLKEAIDKLNELMEKGLV-PDDTTYNIIIHAYCKEGDLENAFQFHNK 580

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  +  KPDVVT NT+      NG+ D+A ++       G + +  T   +I   CK+G 
Sbjct: 581 MVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGD 640

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVE---------------------------I 331
           +  AL F   M+  G+ P+   +N+++    E                           +
Sbjct: 641 VDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPL 700

Query: 332 MDRDGVDEVLALMKEFRVNPDVI---------TYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +    VDE  +  K+ +   + +          Y+ ++N   T+G   + K I D+M + 
Sbjct: 701 LKPSSVDEAES-GKDAKTEEETVENPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQK 759

Query: 383 GIKPDAHAYSILAKGYVREQE 403
           G+  D+  Y  L +G V+ Q+
Sbjct: 760 GMSVDSSTYITLMEGLVKRQK 780



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 145/321 (45%), Gaps = 3/321 (0%)

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT- 230
           G  P+T   +  +  Y     P  + +LL  + R   V+P+L+  N ++ A     + + 
Sbjct: 126 GNLPSTPLADAALSAYSRLRLPHLAAQLLHSLRRRVRVRPSLQAANAVLSALARSPSTSP 185

Query: 231 -EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
             + +    + A  + P+  T+N +   +   G    A   +  M+  G+ P+  T   +
Sbjct: 186 QASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTL 245

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           ++ +C++G + EA      MK+ GV P    +N L+  +  +       +V+  M     
Sbjct: 246 LNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGF 305

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG-IKPDAHAYSILAKGYVREQEPEKAE 408
            PD+ TY+ +      AG +D+   + D+M + G + PD   Y+ LA    + +    A 
Sbjct: 306 EPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDAL 365

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            LL  M E G    +V    +I G C DG ++ A+   +KM + G++P++ T+ TL+  +
Sbjct: 366 RLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAH 425

Query: 469 SEARQPWRAEEILQIMKAFGV 489
            +A    +A  ++  M   G+
Sbjct: 426 CKAGNIAKAYTLMDEMVRRGL 446



 Score =  106 bits (264), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 66/281 (23%), Positives = 130/281 (46%), Gaps = 36/281 (12%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           + A  +++ +IE    PS+ TY TL+  L+   R       ++++ E G+ PD   +N +
Sbjct: 502 EPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNII 561

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           I+A+ + G++E A     KM E+   P   T NTL+ G  + GK ++++KL +    +G 
Sbjct: 562 IHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGK 621

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            K ++ TYN L++  C + ++  A +    M A G++PD  TYN + +A ++ G  ++A+
Sbjct: 622 -KVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQ 680

Query: 269 EVIVEMEHNGVQPNGRTCGII-----------------------------------ISGY 293
            ++ ++  +G      +  ++                                   ++G 
Sbjct: 681 NMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGL 740

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
           C  G+ KEA      M + G+  +   +  L++G V+   R
Sbjct: 741 CTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVKRQKR 781



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/138 (23%), Positives = 60/138 (43%), Gaps = 2/138 (1%)

Query: 381 KAGIKPDAHAYSILAKGYVRE--QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           +  ++P   A + +     R     P+ + +   +++    HPN   F  ++   CS G+
Sbjct: 160 RVRVRPSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGT 219

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +  A+     M   G+SP+  T+ TL+  +        A  +L  MK  GV P + T+  
Sbjct: 220 LADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNT 279

Query: 499 LAEARRATGLTKEAKRIL 516
           L  A    G  K+A +++
Sbjct: 280 LVSAYARLGWIKQATKVV 297


>gi|147859909|emb|CAN83144.1| hypothetical protein VITISV_040783 [Vitis vinifera]
          Length = 724

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 226/447 (50%), Gaps = 16/447 (3%)

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           +F +++    T  +   L+ +       ++A  + + +   G+    V Y+ ++ +LT  
Sbjct: 244 AFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQSLTRT 303

Query: 121 KRFNS--IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
            + +S  +  I +++E + ++ D    N +I  F++SG++  AM     ++ +GL+P T+
Sbjct: 304 NKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTA 363

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           T   +I   G AG+ EE+  + + + +EG + P  R YN L++ +    ++ +A +++ +
Sbjct: 364 TLVAVITALGNAGRTEEAEAIFEEL-KEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSE 422

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  SG  PD  TY+ +  AYA  G  + A  V+ EME +GV+PN      I++ Y   GK
Sbjct: 423 MERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGK 482

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVIT 355
            +++ +  R M+  GV P+   +N++I  F +    + +D  LA     R   V PD +T
Sbjct: 483 WQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKC---NCLDHALATFDRMRMEGVQPDAVT 539

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           ++T+++    +G  +K +E+F+ M ++G  P    Y+I+   +  ++  E  + LL  M 
Sbjct: 540 WNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQ 599

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G   NVV +TT+       G  ++AI  F  M   G+ P++    +L+  + E R+  
Sbjct: 600 SQGLLANVVTYTTL-------GLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDA 652

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEA 502
            A  +LQ MK   + P   T+  L +A
Sbjct: 653 EAFSVLQYMKENDLKPDVVTYTTLMKA 679



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 173/351 (49%), Gaps = 33/351 (9%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  ++ +L   G+ +EA+AIF  L EGG  P    Y  LL             SI+S++
Sbjct: 364 TLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEM 423

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E +G  PD   ++ +I+A++ +G  E A     +M+ SG+ P +  ++ ++  Y   GK 
Sbjct: 424 ERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKW 483

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++S ++L  M R   V P+   YNV++  +     +  A     +M   G++PD VT+NT
Sbjct: 484 QKSFQVLREM-RNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNT 542

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE----------GKIK--- 300
           +   + ++G  ++AEE+   M+ +G  P   T  I+I+ + ++          GK++   
Sbjct: 543 LIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQG 602

Query: 301 ---------------EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD--EVLAL 343
                          +A+   R M+  G+ P++++ N LI  F E  DR   +   VL  
Sbjct: 603 LLANVVTYTTLGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGE--DRRDAEAFSVLQY 660

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           MKE  + PDV+TY+T+M A       DK   ++++M  +G  PD  A ++L
Sbjct: 661 MKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAML 711



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/382 (22%), Positives = 190/382 (49%), Gaps = 8/382 (2%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           + ++ +I+A   S  + EA   F   +   LTP T  YN LI         E+++ L+  
Sbjct: 226 LLYSILIHALGRSEKLYEA---FLLSQRQTLTPLT--YNALIGACARNDDLEKALNLMSR 280

Query: 203 MSREGNVKPNLRTYNVLVRAWC--NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
           M R+G    +   Y+ ++++    N+ + +    +  ++ +  ++ D    N I   +A+
Sbjct: 281 MRRDG-YPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAK 339

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
           +G+ ++A   +  ++ NG+ P   T   +I+     G+ +EA      +KE G+ P    
Sbjct: 340 SGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRA 399

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           +N L+KG+V+       + +++ M+    +PD  TYS +++A++ AG  +  + +  +M 
Sbjct: 400 YNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEME 459

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
            +G++P+++ +S +   Y    + +K+ ++L  M  SG  P+   +  +I  +     +D
Sbjct: 460 ASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLD 519

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            A+  FD+M   GV P+  T+ TL+  + ++    +AEE+ + M+  G  P  +T+ ++ 
Sbjct: 520 HALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMI 579

Query: 501 EARRATGLTKEAKRILSKIKNK 522
            +       ++ K +L K++++
Sbjct: 580 NSFGEQERWEDVKTLLGKMQSQ 601



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 79/362 (21%), Positives = 164/362 (45%), Gaps = 1/362 (0%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +NA+I A + + ++E+A++   +M+  G       Y+ +I+      K + S+       
Sbjct: 258 YNALIGACARNDDLEKALNLMSRMRRDGYPSDFVNYSFIIQSLTRTNKSDSSMLQKIYAE 317

Query: 205 REGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            E + ++ + +  N ++  +    ++  A + +  +  +G+ P   T   + TA    G 
Sbjct: 318 IESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTATLVAVITALGNAGR 377

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            ++AE +  E++  G+ P  R    ++ GY K G +K+A      M+  G  P+   ++L
Sbjct: 378 TEEAEAIFEELKEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSEMERSGFSPDEHTYSL 437

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           LI  +      +    VL  M+   V P+   +S I+ ++   G   K  ++  +M  +G
Sbjct: 438 LIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSG 497

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           + PD H Y+++   + +    + A      M   G  P+ V + T+I   C  G  ++A 
Sbjct: 498 VSPDRHFYNVMIDTFGKCNCLDHALATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAE 557

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           E+F+ M E G SP   T+  ++  + E  +    + +L  M++ G+     T+  L  + 
Sbjct: 558 ELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQSQGLLANVVTYTTLGLSE 617

Query: 504 RA 505
           +A
Sbjct: 618 QA 619



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 119/264 (45%), Gaps = 38/264 (14%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
            ++++ S  +RGK Q++  +   +   G  P    Y  ++         +   +   ++ 
Sbjct: 470 FSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHALATFDRMR 529

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G+ PD++ +N +I+   +SG+  +A + F  M+ESG +P T+TYN +I  +G   + E
Sbjct: 530 MEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWE 589

Query: 195 ESVKLLDLMSREG---------------------------NVKPNLRTYNVLVRAWCNEK 227
           +   LL  M  +G                            +KP++   N L+ A+  ++
Sbjct: 590 DVKTLLGKMQSQGLLANVVTYTTLGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDR 649

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
              EA++V+  M  + +KPDVVTY T+  A  +  + D+   V  EM  +G  P+ +   
Sbjct: 650 RDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKA-- 707

Query: 288 IIISGYCKEGKIKEALRFA-RTMK 310
                      ++ ALR+  RT+K
Sbjct: 708 --------RAMLRSALRYMERTLK 723



 Score = 42.4 bits (98), Expect = 0.81,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 40/71 (56%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V  +  L+N+  E  +  EA ++   + E   KP +VTYTTL+ AL   ++F+ + ++ 
Sbjct: 634 SVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVY 693

Query: 131 SQVEENGMDPD 141
            ++  +G  PD
Sbjct: 694 EEMTLSGCTPD 704


>gi|15983487|gb|AAL11611.1|AF424618_1 AT5g04810/MUK11_13 [Arabidopsis thaliana]
          Length = 950

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 233/508 (45%), Gaps = 73/508 (14%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT------------ 118
           T R  T L+++        EA +    + E G + SLVTY+ ++   +            
Sbjct: 341 TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF 400

Query: 119 -----IQKRFN-SIH-----------------SIMSQVEENGMDPDSIFFNAVINAFSES 155
                I K  N SI+                 +++ ++EE G+D     ++ +++ ++  
Sbjct: 401 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMV 460

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
            + ++ +  F ++KE G TPT  TY  LI  Y   GK  +++++  +M  EG VK NL+T
Sbjct: 461 ADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG-VKHNLKT 519

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           Y++++  +   K+   A+ V   M   GMKPDV+ YN I +A+   G  D+A + + EM+
Sbjct: 520 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 579

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
               +P  RT   II GY K G ++ +L     M+  G  P +  FN LI G VE    +
Sbjct: 580 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQME 639

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD-------- 387
              E+L  M    V+ +  TY+ IM  +++ G   K  E F  +   G+  D        
Sbjct: 640 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 699

Query: 388 ---------------------------AHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
                                      +  Y+IL  G+ R  +  +A +L+  M + G  
Sbjct: 700 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 759

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P++  +T+ IS     G M+RA +  ++M   GV PN+KT+ TL+ G++ A  P +A   
Sbjct: 760 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 819

Query: 481 LQIMKAFGVHPQKSTF--LLLAEARRAT 506
            + MKA G+ P K+ +  LL +   RA+
Sbjct: 820 YEEMKAMGIKPDKAVYHCLLTSLLSRAS 847



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 200/396 (50%), Gaps = 7/396 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+N   + GK  +A  +   + E G K +L TY+ ++      K + +  ++ 
Sbjct: 481 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 540

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + + GM PD I +N +I+AF   GNM+ A+ T  +M++    PTT T+  +I GY  +
Sbjct: 541 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 600

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    S+++ D+M R G V P + T+N L+     ++ + +A  ++ +M  +G+  +  T
Sbjct: 601 GDMRRSLEVFDMMRRCGCV-PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT 659

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  I   YA  G+  +A E    +++ G+  +  T   ++   CK G+++ AL   + M 
Sbjct: 660 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 719

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              +  N  ++N+LI G+    D     +++  MK+  V PD+ TY++ ++A S AG M+
Sbjct: 720 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 779

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  +  ++M   G+KP+   Y+ L KG+ R   PEKA      M   G  P+  ++  ++
Sbjct: 780 RATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 839

Query: 431 SGWCSDGSMDRA------IEVFDKMCEHGVSPNLKT 460
           +   S  S+  A      + +  +M E G+  ++ T
Sbjct: 840 TSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGT 875



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 190/409 (46%), Gaps = 1/409 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           KPS   +  ++     +   +       ++   G+ P S  + ++I+A++   +M+EA+ 
Sbjct: 304 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 363

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              KMKE G+  +  TY+ ++ G+  AG  E +    D   R      N   Y  ++ A 
Sbjct: 364 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT-LNASIYGKIIYAH 422

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C   N+  A  ++ +M   G+   +  Y+T+   Y    +  +   V   ++  G  P  
Sbjct: 423 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 482

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T G +I+ Y K GKI +AL  +R MKE GV  NL  ++++I GFV++ D      V   
Sbjct: 483 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 542

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M +  + PDVI Y+ I++A+   G MD+  +   +M K   +P    +  +  GY +  +
Sbjct: 543 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 602

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
             ++ E+   M   G  P V  F  +I+G      M++A+E+ D+M   GVS N  T+  
Sbjct: 603 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 662

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           +M GY+      +A E    ++  G+     T+  L +A   +G  + A
Sbjct: 663 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 711



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/438 (23%), Positives = 206/438 (47%), Gaps = 1/438 (0%)

Query: 85  RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
           RG    A+  F  +   G  P+   YT+L+ A  + +  +   S + +++E G++   + 
Sbjct: 320 RGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVT 379

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           ++ ++  FS++G+ E A   F + K    T   S Y  +I  +      E +  L+  M 
Sbjct: 380 YSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME 439

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
            EG   P +  Y+ ++  +    +  +   V  ++   G  P VVTY  +   Y + G+ 
Sbjct: 440 EEGIDAP-IAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKI 498

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A EV   M+  GV+ N +T  ++I+G+ K      A      M + G+ P+++++N +
Sbjct: 499 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 558

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I  F  + + D   + +  M++ R  P   T+  I++ ++ +G M +  E+FD M + G 
Sbjct: 559 ISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 618

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P  H ++ L  G V +++ EKA E+L  M  +G   N   +T I+ G+ S G   +A E
Sbjct: 619 VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 678

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
            F ++   G+  ++ T+E L+    ++ +   A  + + M A  +      + +L +   
Sbjct: 679 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 738

Query: 505 ATGLTKEAKRILSKIKNK 522
             G   EA  ++ ++K +
Sbjct: 739 RRGDVWEAADLIQQMKKE 756


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 132/498 (26%), Positives = 228/498 (45%), Gaps = 56/498 (11%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  E CR    + + L+  LI+  K  +A A+   + E G  P ++TYTTL+     +  
Sbjct: 395 MEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 454

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F++   +   +E+NG+ PD   +N + +A  +SG  EEA   +  +   G+  T  TY +
Sbjct: 455 FDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA---YSFLVRKGVVLTKVTYTS 511

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ G+  AG  + +  L++ M  EG  K +  TY+VL++A C +K + EA +++ +M  S
Sbjct: 512 LVDGFSKAGNTDFAAVLIEKMVNEG-CKADSYTYSVLLQALCKQKKLNEALSILDQMTLS 570

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+K ++V Y  I +   + G+ D A+ +  EM  +G +P+  T  + IS YCK G+I+EA
Sbjct: 571 GVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEA 630

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                                  +  +  M+RDGV             PDV+TY+  +N 
Sbjct: 631 -----------------------EHLIGEMERDGV------------APDVVTYNVFING 655

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ----------------EPEK 406
               G+MD+       M  A  +P+   Y IL K +++                  E + 
Sbjct: 656 CGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDT 715

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
             +LL  M++ G +P  V +++II+G+C    ++ A  +FD M    +SPN + +  L+ 
Sbjct: 716 VWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIK 775

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTN 526
              + +   +A   +  M  FG  P   ++  L       G   +AK +   +   E  N
Sbjct: 776 CCCDIKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYN 835

Query: 527 EMEAEEDIPVESLERLYH 544
             E    I  + L +  H
Sbjct: 836 HNEVAWKILNDGLLKAGH 853



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 208/451 (46%), Gaps = 7/451 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R   S T L+  L E    +EA  +   +++ G   +L TYT L+  L  + R +    +
Sbjct: 158 RNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRV 217

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++   G+ P    +NA+I+ + +SG M++A+     M+ +G  P   TYN LI  YG+
Sbjct: 218 LEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILI--YGL 275

Query: 190 AG-KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            G KP+E+ +LL+     G   P + T+  ++  +C  + I +A  V   M +S  K D+
Sbjct: 276 CGEKPDEAEELLNDAIVRG-FTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDL 334

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
             Y  +     +     +A+E + EM  NG+ PN      II GYCK GK+  AL   R 
Sbjct: 335 QAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRL 394

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M+  G  PN   ++ LI G ++         ++  M+E  + P VITY+T++        
Sbjct: 395 MEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 454

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            D    +F+ M + G+ PD  AY++L     +    E+A   L   +  G     V +T+
Sbjct: 455 FDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSFL---VRKGVVLTKVTYTS 511

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++ G+   G+ D A  + +KM   G   +  T+  L+    + ++   A  IL  M   G
Sbjct: 512 LVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSG 571

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           V      + ++       G    AK + +++
Sbjct: 572 VKCNIVAYTIIISEMIKEGKHDHAKSMFNEM 602



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 106/413 (25%), Positives = 193/413 (46%), Gaps = 4/413 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           KP EA+ + N+ I  G  P+++T+T ++      +R +    + + +  +    D   + 
Sbjct: 279 KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYG 338

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN   +    +EA +T  +M  +GL P    Y ++I GY   GK   ++++  LM  E
Sbjct: 339 VLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHE 398

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +PN  TY+ L+     ++ + +A  ++ KM   G+ P V+TY T+     +  E D 
Sbjct: 399 G-CRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 457

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  +   ME NG+ P+ +   ++    CK G+ +EA  F   +   GV    V +  L+ 
Sbjct: 458 AFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYSF---LVRKGVVLTKVTYTSLVD 514

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GF +  + D    ++  M       D  TYS ++ A      +++   I D M  +G+K 
Sbjct: 515 GFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKC 574

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           +  AY+I+    ++E + + A+ +   MI SG  P+   +T  IS +C  G ++ A  + 
Sbjct: 575 NIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLI 634

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
            +M   GV+P++ T+   + G        RA   L+ M      P   T+ +L
Sbjct: 635 GEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWIL 687



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 181/379 (47%), Gaps = 7/379 (1%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +  +I    E+  + EA+     M + G +    TY  LIKG    G+   + ++L+ M 
Sbjct: 163 YTILIQGLCETRCVREALVLLVMMVQDGCSLNLHTYTLLIKGLCKEGRIHGARRVLEEMP 222

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
             G V P++ TYN ++  +C    + +A  +   M  +G  PD  TYN +   Y   GE 
Sbjct: 223 LRG-VVPSVWTYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILI--YGLCGEK 279

Query: 265 -DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D+AEE++ +    G  P   T   II+GYCK  +I +ALR   +M       +L  + +
Sbjct: 280 PDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGV 339

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           LI   ++        E ++ M    + P+V+ Y++I++ +   G +    E+F  M   G
Sbjct: 340 LINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEG 399

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
            +P+A  YS L  G +++Q+  KA  L+  M E G  P V+ +TT+I G C     D A 
Sbjct: 400 CRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAF 459

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
            +F+ M ++G++P+ + +  L     ++    RAEE    +   GV   K T+  L +  
Sbjct: 460 RLFEMMEQNGLTPDEQAYNVLTHALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGF 516

Query: 504 RATGLTKEAKRILSKIKNK 522
              G T  A  ++ K+ N+
Sbjct: 517 SKAGNTDFAAVLIEKMVNE 535



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 160/317 (50%), Gaps = 6/317 (1%)

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
           + G   ++  LL +M   G  + N  +Y +L++  C  + + EA  ++  M   G   ++
Sbjct: 137 VGGDLRKACWLLMMMPLMG-CRRNEYSYTILIQGLCETRCVREALVLLVMMVQDGCSLNL 195

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TY  +     + G    A  V+ EM   GV P+  T   +I GYCK G++K+AL     
Sbjct: 196 HTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 255

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL--ALMKEFRVNPDVITYSTIMNAWSTA 366
           M+  G +P+   +N+LI G       D  +E+L  A+++ F   P VIT++ I+N +  A
Sbjct: 256 MERNGCNPDDWTYNILIYGLCG-EKPDEAEELLNDAIVRGF--TPTVITFTNIINGYCKA 312

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             +D    +   M  +  K D  AY +L    +++   ++A+E +  M  +G  PNVVI+
Sbjct: 313 ERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIY 372

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           T+II G+C  G +  A+EVF  M   G  PN  T+ +L++G  + ++  +A  ++  M+ 
Sbjct: 373 TSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQE 432

Query: 487 FGVHPQKSTFLLLAEAR 503
            G+ P   T+  L + +
Sbjct: 433 DGITPGVITYTTLIQGQ 449



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 164/371 (44%), Gaps = 18/371 (4%)

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           SF + K    T  + T L++   + G    A  +   ++  G K    TY+ LL AL  Q
Sbjct: 495 SFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCKQ 554

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
           K+ N   SI+ Q+  +G+  + + +  +I+   + G  + A   F +M  SG  P+ +TY
Sbjct: 555 KKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSATTY 614

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
              I  Y   G+ EE+  L+  M R+G V P++ TYNV +    +   +  A++ + +M 
Sbjct: 615 TVFISSYCKIGQIEEAEHLIGEMERDG-VAPDVVTYNVFINGCGHMGYMDRAFSTLKRMI 673

Query: 241 ASGMKPDVVTY----------NTIATAYAQNG------EADQAEEVIVEMEHNGVQPNGR 284
            +  +P+  TY          + +   Y          E D   +++  M  +G+ P   
Sbjct: 674 DASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPTAV 733

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T   II+G+CK  +++EA      M+   + PN  I+ +LIK   +I         +  M
Sbjct: 734 TYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDM 793

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD-MGKAGIKPDAHAYSILAKGYVREQE 403
            EF   P + +Y  ++      G  DK K +F D +G      +  A+ IL  G ++   
Sbjct: 794 IEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDGLLKAGH 853

Query: 404 PEKAEELLMTM 414
            +   +LL  M
Sbjct: 854 VDFCSQLLSAM 864


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 190/386 (49%), Gaps = 1/386 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   ++    E G   ++  +   L + G  P++V YTTL+                 
Sbjct: 162 VYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFD 221

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E G+  +   F  +IN   + G  ++  D F KMK +GL P   TYN L+  Y   G
Sbjct: 222 KMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEG 281

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K   +  L D M RE  V+ N+ TYN L+   C E+ + EA  ++ +M  + + P+++TY
Sbjct: 282 KICRAFDLFDEM-RERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITY 340

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   +   G  D+A  ++ +++ NG+ P+  T  I+I GY K G  K     AR M+ 
Sbjct: 341 NTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEG 400

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P+ V   +LI  +V + + +   ++ + M++F + PDV  Y  +++     G M +
Sbjct: 401 RGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKE 460

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++F  MG+  ++P    Y+ +  GY +E    +A  LL  M   G  PNV  +++II 
Sbjct: 461 SSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIG 520

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPN 457
             C DG  + A  + DKM E  + P+
Sbjct: 521 VLCKDGKWEEAEVLLDKMIELQLKPS 546



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 235/481 (48%), Gaps = 9/481 (1%)

Query: 44  QLYSN--SKPTDSQPQTHCSFCMNKE-SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIE 100
           Q+ SN  S P  + P        N+  S  T      ++N+ ++     +A   FN +++
Sbjct: 62  QILSNKISSPFFTVPSLLHHLTQNQNPSMTTALLYESIINAHLKSQLLDKALIFFNEMVD 121

Query: 101 GG--HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNM 158
            G   +P++  + +LL +L     F       ++++E  +  D   F  +I    E+GN+
Sbjct: 122 KGLVFRPNI--FNSLLGSLVRSNCFEKAWLFFNELKER-VKFDVYSFGIMIKGCCENGNL 178

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
           +++      +++ GL+P    Y TLI G    G  E +    D M   G V  N  T+ V
Sbjct: 179 DKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLV-ANQYTFTV 237

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L+     +    + +++  KM  +G+ P++ TYN +   Y   G+  +A ++  EM   G
Sbjct: 238 LINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERG 297

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           V+ N  T   +I G C+E ++ EA +    MK+  V PNL+ +N LI GF ++ + D   
Sbjct: 298 VEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKAS 357

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            +L  +K   ++P ++TY+ ++  +S AG      ++  +M   GI P     ++L   Y
Sbjct: 358 SLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAY 417

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           VR QE EKA ++  +M + G  P+V ++  +I G C  G+M  + ++F  M E  V P+ 
Sbjct: 418 VRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSD 477

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
             + T++ GY +    +RA  +L+ M+A G+ P  +++  +       G  +EA+ +L K
Sbjct: 478 VIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDK 537

Query: 519 I 519
           +
Sbjct: 538 M 538



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 182/354 (51%), Gaps = 1/354 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++   + G  + A+  F+ + E G   +  T+T L+  L  +        +  +++ 
Sbjct: 201 TTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKI 260

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           NG+ P+   +N ++N +   G +  A D F +M+E G+     TYNTLI G     +  E
Sbjct: 261 NGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWE 320

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + KL+D M ++  V PNL TYN L+  +C+  N+ +A +++ ++ ++G+ P +VTYN + 
Sbjct: 321 AEKLVDQM-KKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILI 379

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             Y++ G      ++  EME  G+ P+  TC ++I  Y +  ++++A +   +M+++G+ 
Sbjct: 380 EGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLV 439

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++ ++ +LI G     +     ++   M E  V P  + Y+T+++ +       +   +
Sbjct: 440 PDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRL 499

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
             +M   G+ P+  +YS +     ++ + E+AE LL  MIE    P+  I   I
Sbjct: 500 LREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASILNMI 553



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/293 (27%), Positives = 145/293 (49%), Gaps = 13/293 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LMN     GK   A  +F+ + E G + ++VTY TL+  +  ++R      ++ Q+++  
Sbjct: 273 LMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAA 332

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ I +N +I  F + GN+++A     ++K +GL+P+  TYN LI+GY  AG  +   
Sbjct: 333 VSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVA 392

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M   G + P+  T  VL+ A+   + + +A+ +   M   G+ PDV  Y  +   
Sbjct: 393 DLAREMEGRG-ISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHG 451

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G   ++ ++   M    V+P+      +I GYCKE     ALR  R M+  G+ PN
Sbjct: 452 LCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPN 511

Query: 318 LVIFNLLIKGFVEIMDRDG----VDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
           +  ++ +I     ++ +DG     + +L  M E ++ P     ++I+N  S A
Sbjct: 512 VASYSSIIG----VLCKDGKWEEAEVLLDKMIELQLKPS----ASILNMISKA 556



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/277 (25%), Positives = 141/277 (50%), Gaps = 9/277 (3%)

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGV--QPN--GRTCGIIISGYCKEGKIKEALR 304
           + Y +I  A+ ++   D+A     EM   G+  +PN      G ++   C E    +A  
Sbjct: 94  LLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFE----KAWL 149

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
           F   +KE  V  ++  F ++IKG  E  + D   ++L L+++  ++P+V+ Y+T+++   
Sbjct: 150 FFNELKER-VKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCC 208

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G +++ +  FD MG+ G+  + + +++L  G  ++   +   +L   M  +G  PN+ 
Sbjct: 209 KNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLY 268

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +  +++ +C +G + RA ++FD+M E GV  N+ T+ TL+ G     + W AE+++  M
Sbjct: 269 TYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQM 328

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           K   V P   T+  L       G   +A  +L ++K+
Sbjct: 329 KKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKS 365


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 205/440 (46%), Gaps = 6/440 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++    RG       +   +   G  P++VTY TL++ L  +     I S++S++ E  
Sbjct: 300 LIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERR 359

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +N+VI+A  +  +  +A+    +M   G  P   T++TLI G    G+ +E+ 
Sbjct: 360 LPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAE 419

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL   +R   + PNL +Y  L+  +C    +  A N++ +M   G  PDVVT+  +   
Sbjct: 420 RLLRETTR-WELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHG 478

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G+  +A  V  +M    + P+     ++ISG CK+  +  A      M E  VHP+
Sbjct: 479 LVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPD 538

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             ++  LI GF+     D   ++   M++  ++PDV+ Y+ ++  +   G M++  E   
Sbjct: 539 KYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMS 598

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M K G  PD   Y+ L  GY ++     A  LL  M++    PNVV ++++I+G+C  G
Sbjct: 599 TMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLG 658

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
             D A  +F  M   G+ PN+ T+  L+    +  +  RA    + M      P   T  
Sbjct: 659 DTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLH 718

Query: 498 LLAEARRATGLTKEAKRILS 517
            L      TGL      I+S
Sbjct: 719 SL-----VTGLCNSMASIIS 733



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 191/397 (48%), Gaps = 1/397 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   LM+ L  +G  ++  ++ + + E    P++  Y +++ AL   +  +    ++
Sbjct: 328 TVVTYGTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVL 387

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            Q+   G DPD+I F+ +I+   + G ++EA     +     L P  S+Y +LI G+ + 
Sbjct: 388 KQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVR 447

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+   +  LL  M   G+  P++ T+  L+        ++EA  V  KMAA  + PD   
Sbjct: 448 GEVIVASNLLVEMMERGHT-PDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANI 506

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN + +   +      A  +I EM    V P+      +I G+ +   + EA +    M+
Sbjct: 507 YNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFME 566

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G+HP++V +N +IKG+ +    +   E ++ M++    PD  TY+T++  ++  G + 
Sbjct: 567 QKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNIS 626

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               +  DM K   +P+  AYS L  GY +  + + AE L  +M   G  PNV+ +T +I
Sbjct: 627 GALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILI 686

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
                   + RA   F+ M  +  SPN  T  +L+ G
Sbjct: 687 GSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTG 723



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/475 (22%), Positives = 214/475 (45%), Gaps = 23/475 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V+    ++++L +     +A  +   +  GG  P  +T++TL++ L  + R      ++ 
Sbjct: 364 VQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLR 423

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +     ++P+   + ++I+ F   G +  A +   +M E G TP   T+  LI G  +AG
Sbjct: 424 ETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAG 483

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E++ + + M+    + P+   YNVL+   C +K +  A N++ +M    + PD   Y
Sbjct: 484 QVSEALLVREKMAAR-QLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVY 542

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   + +N   D+A ++   ME  G+ P+      +I GYC+ G + EA+    TM++
Sbjct: 543 TTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRK 602

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P+   +  LI G+ +  +  G   +L  M + R  P+V+ YS+++N +   G  D 
Sbjct: 603 VGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDA 662

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            + +F  M   G+ P+   Y+IL     ++ +  +A      M+ +   PN     ++++
Sbjct: 663 AECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVT 722

Query: 432 GWCSDGSMDRAI-----------------EVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           G C+  SM   I                 ++F  +      P    +  +++        
Sbjct: 723 GLCN--SMASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNML 780

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEME 529
             A ++   M   G  P  +TFL L     + G ++E + IL    N+ + +E+E
Sbjct: 781 GEALDLKNKMANKGYKPDSATFLSLLYGFCSVGKSREWRTIL---PNEFQRDELE 832



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 99/367 (26%), Positives = 178/367 (48%), Gaps = 5/367 (1%)

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           EE+G D  S     ++      G +E+ +        +G  P    YN LI GY   G  
Sbjct: 253 EESGADDYSTC--VMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDV 310

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK-NITEAWNVMHKMAASGMKPDVVTYN 252
              + LL  M  +G + P + TY  L+ +W   K ++ +  +++ +M    + P+V  YN
Sbjct: 311 GRGILLLGEMEAKG-LLPTVVTYGTLM-SWLGRKGDLEKIASLLSEMRERRLPPNVQIYN 368

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++  A  +   A QA  V+ +M   G  P+  T   +ISG C+EG+++EA R  R    +
Sbjct: 369 SVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRW 428

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
            ++PNL  +  LI GF    +      +L  M E    PDV+T+  +++    AG + + 
Sbjct: 429 ELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEA 488

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             + + M    + PDA+ Y++L  G  +++    A  L+  M+E   HP+  ++TT+I G
Sbjct: 489 LLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDG 548

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +  + S+D A ++F+ M + G+ P++  +  ++ GY +      A E +  M+  G  P 
Sbjct: 549 FIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPD 608

Query: 493 KSTFLLL 499
           + T+  L
Sbjct: 609 EFTYTTL 615



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/416 (22%), Positives = 177/416 (42%), Gaps = 47/416 (11%)

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMD---PDSIFFNAVINAFSESGNMEEAMDTFW 166
           ++ LL  L    RF+++ + +  +   G     P      A++  ++++G   +A +   
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQ 212

Query: 167 KMKES-GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
           + +E  G  P  +  N L++      + +++ KL D M  E +   +  T  V+VR  C 
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTC-VMVRGLCL 271

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
           E  + +   ++     +G  P+ V YN                                 
Sbjct: 272 EGLVEKGLKLIEARWGAGCVPNAVFYN--------------------------------- 298

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
             ++I GYC+ G +   +     M+  G+ P +V +  L+       D + +  +L+ M+
Sbjct: 299 --VLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMR 356

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           E R+ P+V  Y+++++A        +   +   M   G  PDA  +S L  G  +E   +
Sbjct: 357 ERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQ 416

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +AE LL        +PN+  +T++I G+C  G +  A  +  +M E G +P++ TF  L+
Sbjct: 417 EAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALI 476

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            G   A Q   A  + + M A  + P  + + +L      +GL K  K++L   +N
Sbjct: 477 HGLVVAGQVSEALLVREKMAARQLLPDANIYNVL-----ISGLCK--KKMLPAARN 525



 Score = 48.1 bits (113), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 44/211 (20%), Positives = 85/211 (40%), Gaps = 26/211 (12%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C+  V + + L+N   + G    A+ +F ++   G  P+++TYT L+ +L  + +
Sbjct: 635 MMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDK 694

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                     +  N   P+    ++++     S            M     +  +ST N 
Sbjct: 695 VVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNS------------MASIISSHCSSTVNL 742

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGN--VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
             KG            LLD+     N    P    YN ++ + C    + EA ++ +KMA
Sbjct: 743 HGKG-----------ALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMA 791

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
             G KPD  T+ ++   +   G++ +   ++
Sbjct: 792 NKGYKPDSATFLSLLYGFCSVGKSREWRTIL 822


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 226/500 (45%), Gaps = 72/500 (14%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           K  C    + + L++S   RGK   A      +I  G K ++  Y +L+         ++
Sbjct: 395 KGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSA 454

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
             S   ++ + G+ P  + + ++I+ +   G + EA   + +M   G+ P T T+ TLI 
Sbjct: 455 AVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLIS 514

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
               A +  ++ +L D M  E N+ PN  TYNV++   C E N  +A+ ++++M   G+ 
Sbjct: 515 ALFRANRMTDAFRLFDEM-LEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLV 573

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PD  TY  + ++    G   +A++ I ++     + N      ++ GYCKEG++++AL  
Sbjct: 574 PDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGV 633

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD------------- 352
            R M + GV  +LV + +LI G ++  D   V  +L  M + R+ PD             
Sbjct: 634 CREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSK 693

Query: 353 ----------------------VITYSTIMNAWSTAGFMDKCK----------------- 373
                                 ++TY+T++N    AG MDK +                 
Sbjct: 694 AGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVT 753

Query: 374 ------------------EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
                             ++ +DM K G+  +  +Y+IL +G+ +    E+A +LL  MI
Sbjct: 754 YCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMI 812

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           ++   P+ + ++TII   C  G++D AIE +D M   G+ P+   +  L++G   A +  
Sbjct: 813 DNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELG 872

Query: 476 RAEEILQIMKAFGVHPQKST 495
           +A E+   M   GV P ++T
Sbjct: 873 KAFELRDDMIRRGVKPNQAT 892



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 209/435 (48%), Gaps = 25/435 (5%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +++ L+  L  +GK  +A  + N + + G  PSL  Y  L+ +L    +F+    +  ++
Sbjct: 333 ALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEM 392

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E G+  + + ++ +I++F   G ++ A+    KM  +G+  T   YN+LI G+   G  
Sbjct: 393 GEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNL 452

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +V   D M  +G +KP + +Y  L+  +CN+  + EA+ + H+M   G+ P+  T+ T
Sbjct: 453 SAAVSFFDEMIDKG-LKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTT 511

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           + +A  +      A  +  EM    + PN  T  ++I G+CKEG   +A      M + G
Sbjct: 512 LISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKG 571

Query: 314 VHPNLVIFNLLI------------KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           + P+   +  LI            K F++ + R+           F++N   + YS +++
Sbjct: 572 LVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHRE----------HFKLNE--MCYSALLH 619

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +   G +     +  +M K G+  D   Y++L  G ++EQ+      LL  M +    P
Sbjct: 620 GYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRP 679

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           + VI+T++I G+   GS+ +A  ++D M + G +PN+ T+ TL+    +A    +AE + 
Sbjct: 680 DKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLW 739

Query: 482 QIMKAFGVHPQKSTF 496
           + M      P   T+
Sbjct: 740 KEMLVSNSTPNHVTY 754



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 199/438 (45%), Gaps = 43/438 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV S T L++    +GK  EA  +++ +   G  P+  T+TTL++AL    R      + 
Sbjct: 470 TVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLF 529

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ E  M P+ + +N +I    + GN  +A +   +M + GL P T TY  LI      
Sbjct: 530 DEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCST 589

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+  E+ K +D + RE + K N   Y+ L+  +C E  + +A  V  +M   G+  D+V 
Sbjct: 590 GRVCEAKKFIDDLHRE-HFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVC 648

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +     +  +      ++  M    ++P+      +I GY K G +K+A      M 
Sbjct: 649 YAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMI 708

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAG 367
           + G  PN+V +  LI    E+     +D+   L KE  V+   P+ +TY   ++  +  G
Sbjct: 709 DEGCTPNIVTYTTLIN---ELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREG 765

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            M+K  ++ +DM K G+  +  +Y+IL +G+ +    E+A +LL  MI++   P+ + ++
Sbjct: 766 SMEKAVQLHNDMLK-GLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYS 824

Query: 428 TIISGWCSDGSMDRAIEVFD-----------------------------------KMCEH 452
           TII   C  G++D AIE +D                                    M   
Sbjct: 825 TIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRR 884

Query: 453 GVSPNLKTFETLMWGYSE 470
           GV PN  T ++L  G S 
Sbjct: 885 GVKPNQATHKSLSHGASR 902



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 204/465 (43%), Gaps = 6/465 (1%)

Query: 67  ESCRTVRSM--TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           E C  + S+    L+ S ++  +  ++  IF  + +    P + T   +L  L   +R +
Sbjct: 151 EKCDFISSLGFDLLIQSYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVD 210

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
            +  +  ++   G+ PD   + AVI +F E  N  +A +   +M+ S L      YN LI
Sbjct: 211 MVLVLFGEILSMGIRPDIYIYVAVIRSFCELKNFAKAKEMIQRMESSDLN--VVVYNVLI 268

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G     +  E+V++ + + ++G     + TY  LV   C  +       VM +M   G 
Sbjct: 269 HGLCKNKRVWEAVEIKNGLIQKGLTASEV-TYCTLVLGLCKVQEFEVGAGVMDEMIELGF 327

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P     +++     + G+   A +++  ++  G  P+      +I+  CK+GK  EA  
Sbjct: 328 VPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAEL 387

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
             + M E G+  N V +++LI  F      D     L  M    +   V  Y++++N   
Sbjct: 388 LFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHC 447

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G +      FD+M   G+KP   +Y+ L  GY  + +  +A  L   M   G  PN  
Sbjct: 448 KLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTY 507

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            FTT+IS       M  A  +FD+M E  + PN  T+  ++ G+ +     +A E+L  M
Sbjct: 508 TFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQM 567

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE-RTNEM 528
              G+ P   T+  L  +  +TG   EAK+ +  +  +  + NEM
Sbjct: 568 VQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEM 612



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 108/455 (23%), Positives = 206/455 (45%), Gaps = 17/455 (3%)

Query: 76  TKLMNSLIERG--KPQEAQAIFNNLIEGGHKPSLVT---YTTLLAALTIQKR-FNS--IH 127
           + L+ +L+ RG   P+E   +F  L++   K   ++   +  L+ +   +KR F+S  I 
Sbjct: 125 SSLLQTLLLRGGLDPRE---VFEALLDCFEKCDFISSLGFDLLIQSYVQEKRMFDSVLIF 181

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            +M Q E   + P       V+N  ++   ++  +  F ++   G+ P    Y  +I+ +
Sbjct: 182 RLMRQCE---LMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRPDIYIYVAVIRSF 238

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
               + +   K  +++ R  +   N+  YNVL+   C  K + EA  + + +   G+   
Sbjct: 239 C---ELKNFAKAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWEAVEIKNGLIQKGLTAS 295

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
            VTY T+     +  E +    V+ EM   G  P       ++ G  ++GK+ +A     
Sbjct: 296 EVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVN 355

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            +K+ G  P+L ++N LI    +    D  + +   M E  +  + +TYS +++++   G
Sbjct: 356 RVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRG 415

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +D        M  AGIK   + Y+ L  G+ +      A      MI+ G  P VV +T
Sbjct: 416 KLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYT 475

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           ++ISG+C+ G +  A  ++ +M   G++PN  TF TL+     A +   A  +   M   
Sbjct: 476 SLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQ 535

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            + P + T+ ++ E     G T +A  +L+++  K
Sbjct: 536 NMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQK 570



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 78/324 (24%), Positives = 150/324 (46%), Gaps = 2/324 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++SL   G+  EA+   ++L     K + + Y+ LL     + R      +  ++ + G
Sbjct: 582 LISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRG 641

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +D D + +  +I+   +  +          M +  L P    Y ++I GY  AG  +++ 
Sbjct: 642 VDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAF 701

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            + D+M  EG   PN+ TY  L+   C    + +A  +  +M  S   P+ VTY      
Sbjct: 702 GIWDIMIDEG-CTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDH 760

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            A+ G  ++A ++  +M   G+  N  +  I++ G+CK G+++EA +    M +  + P+
Sbjct: 761 LAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPD 819

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + ++ +I       + DG  E    M    + PD + Y+ ++     AG + K  E+ D
Sbjct: 820 CITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRD 879

Query: 378 DMGKAGIKPDAHAYSILAKGYVRE 401
           DM + G+KP+   +  L+ G  R+
Sbjct: 880 DMIRRGVKPNQATHKSLSHGASRK 903


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 197/388 (50%), Gaps = 5/388 (1%)

Query: 83  IERGKPQEAQAIFNNLIEGGHK---PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           + R  P  A + +N +   G     P+L TY  L+ +     R +   + +  V + G  
Sbjct: 64  VARHSPAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFR 123

Query: 140 PDSIFFNAVINAFSESGNMEEAMD-TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            D+I F  ++          +AMD    +M + G  P   +YN L+KG     + +E+++
Sbjct: 124 VDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALE 183

Query: 199 LLDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           LL +M  +G +  P++ +Y  ++  +  E ++ +A+   H+M   G+ P+VVTY++I  A
Sbjct: 184 LLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAA 243

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+A EV+  M  NGV PN RT   I+ GYC  G+ KEA+ F + M   GV P+
Sbjct: 244 LCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPD 303

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N L+    +        ++   M +  + P++ TY T++  ++T G + +   + D
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + GI P+ + +SIL   Y ++ + ++A  +   M + G +P+ V + T+I   C  G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLM 465
            ++ A+  F++M +  +SP    + +L+
Sbjct: 424 RVEDAMRYFEQMIDERLSPGNIVYNSLI 451



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/342 (26%), Positives = 170/342 (49%), Gaps = 4/342 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAI-FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           + T L+  L    +  +A  I    + + G  P++ +Y  LL  L  + R      ++  
Sbjct: 128 AFTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQM 187

Query: 133 VEENGMD--PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + ++G D  PD + +  VIN F + G++++A  T+ +M + G+ P   TY+++I     A
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKA 247

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              ++++++L  M + G V PN RTYN +V  +C+     EA   + KM + G++PDVVT
Sbjct: 248 QAMDKAMEVLTSMVKNG-VMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVT 306

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++     +NG   +A ++   M   G++P   T G ++ GY  +G + E       M 
Sbjct: 307 YNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 366

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+HPN  +F++LI  + +    D    V + M++  +NPD +TY T++     +G ++
Sbjct: 367 RNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVE 426

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
                F+ M    + P    Y+ L        + +KA++  +
Sbjct: 427 DAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKDYFL 468



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 89/335 (26%), Positives = 157/335 (46%), Gaps = 5/335 (1%)

Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V   + M+R G   V PNL TY +L+ + C    +   +  +  +   G + D + 
Sbjct: 69  PAAAVSRYNRMARAGADEVTPNLCTYGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIA 128

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +      +     A ++++  M   G  PN  +  I++ G C E + +EAL   + M
Sbjct: 129 FTPLLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMM 188

Query: 310 KEYG--VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            + G    P++V +  +I GF +  D D        M +  + P+V+TYS+I+ A   A 
Sbjct: 189 PDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQ 248

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            MDK  E+   M K G+ P+   Y+ +  GY    +P++A   L  M   G  P+VV + 
Sbjct: 249 AMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYN 308

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +++   C +G    A ++FD M + G+ P + T+ TL+ GY+          +L +M   
Sbjct: 309 SLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 368

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G+HP    F +L  A    G   +A  + SK++ +
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQ 403



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 144/263 (54%), Gaps = 2/263 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N   + G   +A   ++ +++ G  P++VTY++++AAL   +  +    +++
Sbjct: 199 VVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLT 258

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +NG+ P+   +N++++ +  SG  +EA+    KM   G+ P   TYN+L+      G
Sbjct: 259 SMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNG 318

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G +KP + TY  L++ +  +  + E   ++  M  +G+ P+   +
Sbjct: 319 RCTEARKMFDSMTKRG-LKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 377

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  AYA+ G+ DQA  V  +M   G+ P+  T G +I   CK G++++A+R+   M +
Sbjct: 378 SILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMID 437

Query: 312 YGVHPNLVIFNLLIKGFVEIMDR 334
             + P  +++N LI     I D+
Sbjct: 438 ERLSPGNIVYNSLIHSLC-IFDK 459



 Score = 92.4 bits (228), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 48/163 (29%), Positives = 89/163 (54%), Gaps = 5/163 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM+ L + G+  EA+ +F+++ + G KP + TY TLL     +     +H ++ 
Sbjct: 304 VVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLD 363

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  NG+ P+   F+ +I A+++ G +++AM  F KM++ GL P T TY T+I     +G
Sbjct: 364 LMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSG 423

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           + E++++  + M  E  + P    YN L+ + C    I + W+
Sbjct: 424 RVEDAMRYFEQMIDE-RLSPGNIVYNSLIHSLC----IFDKWD 461


>gi|42567647|ref|NP_568141.2| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|122223689|sp|Q0WMY5.1|PP365_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g04810, chloroplastic; AltName: Full=Maize PPR4
           homolog; Short=AtPPR4; Flags: Precursor
 gi|110739199|dbj|BAF01515.1| membrane-associated salt-inducible protein-like [Arabidopsis
           thaliana]
 gi|332003406|gb|AED90789.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 952

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 138/508 (27%), Positives = 233/508 (45%), Gaps = 73/508 (14%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT------------ 118
           T R  T L+++        EA +    + E G + SLVTY+ ++   +            
Sbjct: 343 TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF 402

Query: 119 -----IQKRFN-SIH-----------------SIMSQVEENGMDPDSIFFNAVINAFSES 155
                I K  N SI+                 +++ ++EE G+D     ++ +++ ++  
Sbjct: 403 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMV 462

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
            + ++ +  F ++KE G TPT  TY  LI  Y   GK  +++++  +M  EG VK NL+T
Sbjct: 463 ADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG-VKHNLKT 521

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           Y++++  +   K+   A+ V   M   GMKPDV+ YN I +A+   G  D+A + + EM+
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
               +P  RT   II GY K G ++ +L     M+  G  P +  FN LI G VE    +
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQME 641

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD-------- 387
              E+L  M    V+ +  TY+ IM  +++ G   K  E F  +   G+  D        
Sbjct: 642 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 701

Query: 388 ---------------------------AHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
                                      +  Y+IL  G+ R  +  +A +L+  M + G  
Sbjct: 702 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 761

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P++  +T+ IS     G M+RA +  ++M   GV PN+KT+ TL+ G++ A  P +A   
Sbjct: 762 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 821

Query: 481 LQIMKAFGVHPQKSTF--LLLAEARRAT 506
            + MKA G+ P K+ +  LL +   RA+
Sbjct: 822 YEEMKAMGIKPDKAVYHCLLTSLLSRAS 849



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 200/396 (50%), Gaps = 7/396 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+N   + GK  +A  +   + E G K +L TY+ ++      K + +  ++ 
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + + GM PD I +N +I+AF   GNM+ A+ T  +M++    PTT T+  +I GY  +
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    S+++ D+M R G V P + T+N L+     ++ + +A  ++ +M  +G+  +  T
Sbjct: 603 GDMRRSLEVFDMMRRCGCV-PTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHT 661

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  I   YA  G+  +A E    +++ G+  +  T   ++   CK G+++ AL   + M 
Sbjct: 662 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 721

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              +  N  ++N+LI G+    D     +++  MK+  V PD+ TY++ ++A S AG M+
Sbjct: 722 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 781

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  +  ++M   G+KP+   Y+ L KG+ R   PEKA      M   G  P+  ++  ++
Sbjct: 782 RATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 841

Query: 431 SGWCSDGSMDRA------IEVFDKMCEHGVSPNLKT 460
           +   S  S+  A      + +  +M E G+  ++ T
Sbjct: 842 TSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGT 877



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 190/409 (46%), Gaps = 1/409 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           KPS   +  ++     +   +       ++   G+ P S  + ++I+A++   +M+EA+ 
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              KMKE G+  +  TY+ ++ G+  AG  E +    D   R      N   Y  ++ A 
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT-LNASIYGKIIYAH 424

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C   N+  A  ++ +M   G+   +  Y+T+   Y    +  +   V   ++  G  P  
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T G +I+ Y K GKI +AL  +R MKE GV  NL  ++++I GFV++ D      V   
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M +  + PDVI Y+ I++A+   G MD+  +   +M K   +P    +  +  GY +  +
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
             ++ E+   M   G  P V  F  +I+G      M++A+E+ D+M   GVS N  T+  
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTK 664

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           +M GY+      +A E    ++  G+     T+  L +A   +G  + A
Sbjct: 665 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 713



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/447 (23%), Positives = 200/447 (44%), Gaps = 36/447 (8%)

Query: 85  RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
           RG    A+  F  +   G  P+   YT+L+ A  + +  +   S + +++E G++   + 
Sbjct: 322 RGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVT 381

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           ++ ++  FS++G+ E A   F + K    T   S Y  +I  +      E +  L+  M 
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME 441

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
            EG   P +  Y+ ++  +    +  +   V  ++   G  P VVTY  +   Y + G+ 
Sbjct: 442 EEGIDAP-IAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKI 500

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A EV   M+  GV+ N +T  ++I+G+ K      A      M + G+ P+++++N +
Sbjct: 501 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 560

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I  F  + + D   + +  M++ R  P   T+  I++ ++ +G M +  E+FD M + G 
Sbjct: 561 ISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P  H ++ L  G V +++ EKA E+L  M  +G   N   +T I+ G+ S G   +A E
Sbjct: 621 VPTVHTFNGLINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 680

Query: 445 VFDKMCEHGVSPNLKTFETLMW-----------------------------------GYS 469
            F ++   G+  ++ T+E L+                                    G++
Sbjct: 681 YFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 740

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTF 496
                W A +++Q MK  GV P   T+
Sbjct: 741 RRGDVWEAADLIQQMKKEGVKPDIHTY 767


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  192 bits (487), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 227/503 (45%), Gaps = 46/503 (9%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           + KL+N   + GK  E+      L+  G+ P ++  T L+      K       +M ++ 
Sbjct: 71  LMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EIL 129

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI------KGYG 188
           E+  +PD   +NAVI+ F +   +E A     +MK  G  P   TYN +I      +  G
Sbjct: 130 ESHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG 189

Query: 189 IA-----------------------------GKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           +A                             G   E++KLL+ M   G + P++ TYN +
Sbjct: 190 LALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG-LLPDMYTYNAI 248

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +R  C E  +  A  ++  + + G KPDV++YN +  A+   G+ D+ E+++ EM   G 
Sbjct: 249 IRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGC 308

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           +PN  T  I+IS  C+ G+I EA+   + M E  + P+   ++ LI    +    D    
Sbjct: 309 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 368

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           ++  M      PD++ Y+TI+ A    G  ++  EIF+ +   G  P+  +Y+ +     
Sbjct: 369 IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALW 428

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
              +  +A  ++  MI  G  P+ + + ++IS  C DG ++ AI + D M + G  P + 
Sbjct: 429 SCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVI 488

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           ++  ++ G  + R+   A  +   M   G  P ++T++LL E     G   EA       
Sbjct: 489 SYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEA------- 541

Query: 520 KNKERTNEMEAEEDIPVESLERL 542
              E  N + + + I  +S +RL
Sbjct: 542 --MELANSLFSRDVISQDSFKRL 562


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 208/443 (46%), Gaps = 5/443 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +L  R   + AQ   + ++  G +P   T+ +L+      ++    H +  ++   G
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRG 194

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              D++ + A+I  F E+G ++EA++ F +M +    P   T+  L+KG   AG+ EE +
Sbjct: 195 FSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGL 250

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L  M +E   +P  R Y  LV  WC E+   EA  ++++M  SG+ P VVT   +  A
Sbjct: 251 CMLQKM-KELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNA 309

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G    A  V   M   G +PN  T   I+ G+C  GK+ +A+     M+E GV P+
Sbjct: 310 YCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPD 369

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +NLLI+G            +L LM+   +  D  TY+ +++A    G +D+   +FD
Sbjct: 370 VVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFD 429

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +   GI+P++  ++ +  G  +  + + A   L  MI +G+ P+   ++  I   C   
Sbjct: 430 GLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTK 489

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
                +   D+M +  V P+   +  ++      R    A  I   M + G  P   T+ 
Sbjct: 490 GSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYT 549

Query: 498 LLAEARRATGLTKEAKRILSKIK 520
               A    G   EA+ +++++K
Sbjct: 550 TSVRAYCNEGRLDEAENVVTEMK 572



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 176/361 (48%), Gaps = 5/361 (1%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P+  TY  L+ AL  +         +S +  +G  PD+  FN++I  +  +  +E A D 
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F KM   G +    +Y  LI+G+  AG+ +E+++L   M+     +P++ T+  LV+  C
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT-----QPDMYTHAALVKGLC 241

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
           +     E   ++ KM   G +P    Y  +   + +  +A++AE+++ EM  +G+ P   
Sbjct: 242 DAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           TC I+++ YC+EG++  A+R   +M+  G  PN+  +N +++GF           +L  M
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
           +E  V PDV+TY+ ++      G +     +   M   G+  D + Y++L     +  + 
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           ++A  L   +   G  PN V F T+I+G C  G  D A    + M   G +P+  T+   
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPF 481

Query: 465 M 465
           +
Sbjct: 482 I 482



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 182/387 (47%), Gaps = 7/387 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L + G+ +E   +   + E G +P+   Y  L+     +++      I++++ ++G
Sbjct: 236 LVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSG 295

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P  +    V+NA+   G M  A+  F  M+  G  P   TYN +++G+  AGK  +++
Sbjct: 296 LMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAM 355

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LLD M RE  V+P++ TYN+L+R  C + +I  A+ ++  M  +G+  D  TYN +  A
Sbjct: 356 ALLDQM-RECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDA 414

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+ D+A  +   +E+ G++PN  T   +I+G CK GK   A  F   M   G  P+
Sbjct: 415 LCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPD 474

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKE 374
              ++  I+   +     G  E L  + E     V P  + Y+ ++N             
Sbjct: 475 TYTYSPFIENLCKT---KGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATR 531

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           I+  M   G  PD   Y+   + Y  E   ++AE ++  M +     + + + T+I G  
Sbjct: 532 IWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHT 591

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTF 461
           S G  DRA+ +   M      PN  TF
Sbjct: 592 SIGQTDRAVTILKHMTGVASMPNHFTF 618



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 198/433 (45%), Gaps = 21/433 (4%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T R+   L++      K +EA+ I N + + G  P +VT T ++ A   + R +    + 
Sbjct: 264 TTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVF 323

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   G +P+   +NA++  F  +G + +AM    +M+E G+ P   TYN LI+G  I 
Sbjct: 324 ESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCID 383

Query: 191 GKPEESVKLLDLMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           G    + +LL LM  EGN +  +  TYNVL+ A C    + EA ++   +   G++P+ V
Sbjct: 384 GHIGSAFRLLRLM--EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSV 441

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           T+NT+     + G+ D A   +  M   G  P+  T    I   CK    +E L F   M
Sbjct: 442 TFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEM 501

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            +  V P+ V + ++I       +      +   M     +PDV+TY+T + A+   G +
Sbjct: 502 LQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRL 561

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D+ + +  +M K     DA AY+ L  G+    + ++A  +L  M      PN   F  +
Sbjct: 562 DEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFIL 621

Query: 430 -----------------ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
                             S W +    D   E+F+ M ++ V  + +T+ +++ G+SE R
Sbjct: 622 LRHLLQRRLAEHVPLKATSVWKTIELAD-VFELFELMKKNSVPSSARTYLSILEGFSEER 680

Query: 473 QPWRAEEILQIMK 485
           +      ++ +MK
Sbjct: 681 RLDEVTSLVSLMK 693



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 113/483 (23%), Positives = 205/483 (42%), Gaps = 56/483 (11%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++      GK  +A A+ + + E G +P +VTY  L+    I     S   ++ 
Sbjct: 335 VWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLR 394

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +E NG+  D   +N +I+A  ++G ++EA   F  ++  G+ P + T+NT+I G   AG
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAG 454

Query: 192 KPEESVKLLDLM------------------------SREG----------NVKPNLRTYN 217
           K + +   L+ M                        S+EG          +VKP+   Y 
Sbjct: 455 KFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYT 514

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +++    NE+N   A  +  +M + G  PDVVTY T   AY   G  D+AE V+ EM+  
Sbjct: 515 IVINRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKC 574

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL------------- 324
               +      +I G+   G+   A+   + M      PN   F +L             
Sbjct: 575 RTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHV 634

Query: 325 ------IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
                 +   +E+ D   V E+  LMK+  V     TY +I+  +S    +D+   +   
Sbjct: 635 PLKATSVWKTIELAD---VFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSL 691

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M +  +  +   Y+ L   + + +    A  LL +MI  GF PN++ +  ++SG  ++G 
Sbjct: 692 MKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQ 751

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
            DRA E+F        + +   ++ ++ G+          +++ +++     P   T+ +
Sbjct: 752 ADRAKEIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAM 811

Query: 499 LAE 501
           L E
Sbjct: 812 LTE 814



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/320 (26%), Positives = 144/320 (45%), Gaps = 39/320 (12%)

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++L   M R     P   TYN L+RA C   ++  A   +  M  SG +PD  T+N++  
Sbjct: 113 LRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLIL 172

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y +  + + A ++  +M   G   +  +   +I G+C+ G+I EAL   R M +     
Sbjct: 173 GYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----- 227

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
                                             PD+ T++ ++     AG  ++   + 
Sbjct: 228 ----------------------------------PDMYTHAALVKGLCDAGRGEEGLCML 253

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             M + G +P   AY+ L   + REQ+ E+AE++L  M +SG  P VV  T +++ +C +
Sbjct: 254 QKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCRE 313

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G M  A+ VF+ M   G  PN+ T+  ++ G+  A + ++A  +L  M+  GV P   T+
Sbjct: 314 GRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTY 373

Query: 497 LLLAEARRATGLTKEAKRIL 516
            LL   +   G    A R+L
Sbjct: 374 NLLIRGQCIDGHIGSAFRLL 393


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 230/472 (48%), Gaps = 15/472 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++SL +  +  EA  +   +   G  P   T+  ++  L    R N    +++++   G
Sbjct: 252 LIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRG 311

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD I +  ++N   + G ++ A D F+++ +    PT+  +NTLI G+   G+ +++ 
Sbjct: 312 FTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVIFNTLIHGFVTHGRLDDAK 367

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L  M     + P++ TYN L+  +  +  +  A  V+  M   G KP+V +Y  +   
Sbjct: 368 AVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDG 427

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G+ D+A  ++ EM  +G++PN      +IS +CKE +I EA+   R M   G  P+
Sbjct: 428 FCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPD 487

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKE 374
           +  FN LI G  E+   D +   L L+++     V  + +TY+T++NA+   G + + ++
Sbjct: 488 VYTFNSLISGLCEV---DEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARK 544

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + ++M   G   D   Y+ L KG  R  E +KA  L   M+  G  P+ +    +I+G C
Sbjct: 545 LVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLC 604

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G ++ A+E   +M   G +P++ TF +L+ G   A +      + + ++A G+ P   
Sbjct: 605 RSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTV 664

Query: 495 TFLLLAEARRATGLTKEAKRILSK-----IKNKERTNEMEAEEDIPVESLER 541
           T+  L       G   +A  +L +         +RT  +  +  +P E+L+R
Sbjct: 665 TYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILLQSLVPQETLDR 716



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 183/377 (48%), Gaps = 8/377 (2%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +N V+         + A + F+ M    + PT  T+  ++K      + + ++ +L  M+
Sbjct: 179 YNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSVLRDMT 238

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           + G V PN   Y  L+ +      + EA  ++ +M   G  PD  T+N +     +    
Sbjct: 239 KHGCV-PNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRI 297

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR-FARTMKEYGVHPNLVIFNL 323
           ++A +++  M   G  P+  T G +++G CK G++  A   F R  K     P  VIFN 
Sbjct: 298 NEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK-----PTSVIFNT 352

Query: 324 LIKGFVEIMDRDGVDEVLA-LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           LI GFV     D    VL+ ++  + + PDV TY++++  +   G +    E+  DM   
Sbjct: 353 LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNK 412

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G KP+ ++Y+IL  G+ +  + ++A  LL  M   G  PN V F  +IS +C +  +  A
Sbjct: 413 GCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEA 472

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           +E+F +M   G  P++ TF +L+ G  E  +   A  +L+ M + GV     T+  L  A
Sbjct: 473 VEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINA 532

Query: 503 RRATGLTKEAKRILSKI 519
               G  KEA+++++++
Sbjct: 533 FLRRGEIKEARKLVNEM 549



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/450 (24%), Positives = 214/450 (47%), Gaps = 7/450 (1%)

Query: 65  NKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           N  SC  T +S   ++  L+     + A  +F +++     P+L T+  ++ AL      
Sbjct: 168 NVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEV 227

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +S  S++  + ++G  P+S+ +  +I++ S+   + EA+    +M   G  P   T+N +
Sbjct: 228 DSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDV 287

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G     +  E+ K+++ M   G   P+  TY  L+   C    +  A ++ +++    
Sbjct: 288 ILGLCKFDRINEAAKMVNRMLIRG-FTPDDITYGYLMNGLCKIGRVDAAKDLFYRIP--- 343

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN-GVQPNGRTCGIIISGYCKEGKIKEA 302
            KP  V +NT+   +  +G  D A+ V+ +M  + G+ P+  T   +I GY K+G +  A
Sbjct: 344 -KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLA 402

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L   R M+  G  PN+  + +L+ GF ++   D    +L  M    + P+ + ++ +++A
Sbjct: 403 LEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISA 462

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +     + +  EIF +M + G KPD + ++ L  G     E + A  LL  MI  G   N
Sbjct: 463 FCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVAN 522

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            V + T+I+ +   G +  A ++ ++M   G   +  T+ +L+ G   A +  +A  + +
Sbjct: 523 TVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFE 582

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            M   G+ P   +  +L      +G+ +EA
Sbjct: 583 KMLRDGLVPSSISCNILINGLCRSGMVEEA 612



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 2/228 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C+  V +   L++ L E  + + A  +  ++I  G   + VTY TL+ A   +  
Sbjct: 479 MPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGE 538

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +++++   G   D I +N++I     +G +++A   F KM   GL P++ + N 
Sbjct: 539 IKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNI 598

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G   +G  EE+V+    M   G+  P++ T+N L+   C    I +   +  K+ A 
Sbjct: 599 LINGLCRSGMVEEAVEFQKEMVLRGST-PDIVTFNSLINGLCRAGRIEDGLTMFRKLQAE 657

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
           G+ PD VTYNT+ +   + G    A  ++ E   +G  PN RT  I++
Sbjct: 658 GIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDRTWSILL 705


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 215/450 (47%), Gaps = 7/450 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++T ++NS     +   A ++   +++ GH+P   T+TTL+  L +  +      +  
Sbjct: 91  VYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFD 150

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  P+ + +  ++N   +   + EA++ F +M   G++P   TYN+LI       
Sbjct: 151 KMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLC 210

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +    LL+ M +   + PN+ + N++V A C E  +TEA +V+  M   G++PDVVTY
Sbjct: 211 EWKHVTTLLNEMVKS-KIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTY 269

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +   +    E D+A +V   M  NG   N  +   +I+GYCK  +I +A+     M  
Sbjct: 270 AALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCR 329

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGF 368
             + PN + ++ LI G   +     + + +AL  E       P+++TYS +++       
Sbjct: 330 QELIPNTMTYSTLIHGLCHV---GRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHR 386

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           + +   +   +  + + PD   Y+I   G  R  + E A +L   +   G  P+V     
Sbjct: 387 LAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNI 446

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G C  G +D A ++F +M E+G   N  T+ T+  G  +  +  RA ++L+ M A G
Sbjct: 447 MIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARG 506

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSK 518
                ST  LL +     GL +  K+IL +
Sbjct: 507 FSADVSTTALLVKMLSDDGLDQSVKQILCE 536



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 205/430 (47%), Gaps = 36/430 (8%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A + F+ ++     P +  +  LL ++   K ++++ S+  +++  G+ PD      VI
Sbjct: 39  DALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVI 98

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N+F     ++ A+    K+ + G  P T+T+ TL++G  + GK  E++ + D M  EG  
Sbjct: 99  NSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEG-F 157

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +PN+ TY  L+   C ++ +TEA N+  +M A G+ PD+ TYN++  A     E      
Sbjct: 158 QPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTT 217

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           ++ EM  + + PN  +  I++   CKEGK+ EA            H    + +++I+G V
Sbjct: 218 LLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEA------------HD---VVDMMIQGGV 262

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           E                    PDV+TY+ +M+       MD+  ++FD M + G   +  
Sbjct: 263 E--------------------PDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVV 302

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           +Y+ L  GY + Q  +KA  L   M      PN + ++T+I G C  G +  AI +F++M
Sbjct: 303 SYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEM 362

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G  PNL T+  L+    +  +   A  +L+ ++   + P    + +  +     G  
Sbjct: 363 VACGQIPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDL 422

Query: 510 KEAKRILSKI 519
           + A+ + S +
Sbjct: 423 EAARDLFSNL 432



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/421 (23%), Positives = 196/421 (46%), Gaps = 12/421 (2%)

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           +N     S+ FN           +++A+ +F +M      P    +  L+          
Sbjct: 24  QNNFQSKSLHFNT----------LDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYS 73

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
             + L   M   G + P++ T  +++ ++C+   +  A +V+ K+   G +PD  T+ T+
Sbjct: 74  TVLSLSKKMDSFG-IPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTL 132

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                  G+  +A +V  +M   G QPN  T G +++G CK+ ++ EAL     M   G+
Sbjct: 133 VRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGI 192

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P++  +N LI     + +   V  +L  M + ++ P+V++ + +++A    G + +  +
Sbjct: 193 SPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHD 252

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + D M + G++PD   Y+ L  G+    E ++A ++   M+ +G   NVV + T+I+G+C
Sbjct: 253 VVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYC 312

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
               +D+A+ +F++MC   + PN  T+ TL+ G     +   A  +   M A G  P   
Sbjct: 313 KIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLV 372

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPN 554
           T+ +L +         EA  +L  I+      +++   +I ++ + R    EA    + N
Sbjct: 373 TYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQV-YNIAIDGMCRAGDLEAARDLFSN 431

Query: 555 L 555
           L
Sbjct: 432 L 432


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 222/462 (48%), Gaps = 38/462 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH--KPSLVTYTTLLAALTIQKRFNSIHSI 129
           V S + L+ SL ++GK  +A  +   + EGG    P +V Y+T++     +   N    +
Sbjct: 182 VFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDL 241

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ + G+ PD + +++V++A  ++  M++A     +M   G+ P   TYN LI GY  
Sbjct: 242 FKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSS 301

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA--------- 240
            G+ +E+V++   M R  ++ P++ T ++L+ + C    I EA +V   MA         
Sbjct: 302 TGQWKEAVRVFKEMRRH-SILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVF 360

Query: 241 --------------------------ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
                                       G+ PD+ T+N +  AYA  G  D+A  +  EM
Sbjct: 361 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 420

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
             +GV+P+  T   +I+  C+ GK+ +A+     M + GV P+   ++ LI+GF      
Sbjct: 421 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSL 480

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
               E+++ +    ++ D++ +S+I+N     G +   + IFD     G+ P A  YS+L
Sbjct: 481 LKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSML 540

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             GY    + EKA  +   M+ +G  PN V++ T+++G+C  G +D  + +F +M + G+
Sbjct: 541 MDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGI 600

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            P+   +  ++ G  EA +   A+     M   G+   K T+
Sbjct: 601 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTY 642



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 215/483 (44%), Gaps = 39/483 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSIMSQVEEN 136
           LM+      +P+ A A F  L+  G + +++    LL      KR + ++  ++ +  E 
Sbjct: 117 LMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDILLHRTPEL 176

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG--LTPTTSTYNTLIKGYGIAGKPE 194
           G  PD   ++ ++ +  + G   +A D    M E G   +P    Y+T+I G+   G   
Sbjct: 177 GCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVN 236

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++  L   M + G + P+  TY+ +V A C  + + +A   + +M   G+ P+  TYN +
Sbjct: 237 KACDLFKEMVQRG-IPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNL 295

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              Y+  G+  +A  V  EM  + + P+  T  +++   CK GKIKEA     TM   G 
Sbjct: 296 IYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQ 355

Query: 315 HPNLVIFNLLIKGFV------------EIMDRDGV--------------------DEVLA 342
           +PN+  + +++ G+             ++M  DG+                    D+ + 
Sbjct: 356 NPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMI 415

Query: 343 LMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +  E R   V PDV+TY T++ A    G MD   E F+ M   G+ PD +AY  L +G+ 
Sbjct: 416 IFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFC 475

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
                 KA+EL+  ++ +G H ++V F++II+  C  G +  A  +FD     G+ P   
Sbjct: 476 THGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAV 535

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            +  LM GY    +  +A  +   M + G+ P    +  L       G   E   +  ++
Sbjct: 536 VYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREM 595

Query: 520 KNK 522
             K
Sbjct: 596 LQK 598



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 215/483 (44%), Gaps = 36/483 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + +++   + G   +A  +F  +++ G  P  VTY++++ AL   +  +   + + 
Sbjct: 219 VVAYSTVIDGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLR 278

Query: 132 QVEENGMDPDSIFFNAVINAFSESGN---------------------------------- 157
           Q+   G+ P++  +N +I  +S +G                                   
Sbjct: 279 QMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 338

Query: 158 -MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            ++EA D F  M   G  P   +Y  ++ GY   G   +   L DLM  +G + P++ T+
Sbjct: 339 KIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG-IAPDIYTF 397

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           NVL++A+ N   + +A  + ++M   G+KPDVVTY T+  A  + G+ D A E   +M  
Sbjct: 398 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 457

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            GV P+      +I G+C  G + +A      +   G+H ++V F+ +I    ++     
Sbjct: 458 QGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMD 517

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              +  L     ++P  + YS +M+ +   G M+K   +FD M  AGI+P+   Y  L  
Sbjct: 518 AQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVN 577

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           GY +    ++   L   M++ G  P+ +++  II G    G    A   F +M E G++ 
Sbjct: 578 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 637

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N  T+  ++ G  + R    A  + + ++A  V     T   +      T   +EAK + 
Sbjct: 638 NKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLF 697

Query: 517 SKI 519
           + I
Sbjct: 698 ASI 700



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 211/424 (49%), Gaps = 7/424 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +++ LM SL + GK +EA+ +F+ +   G  P++ +YT +L     +     +  +  
Sbjct: 324 VVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFD 383

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G+ PD   FN +I A++  G +++AM  F +M++ G+ P   TY T+I      G
Sbjct: 384 LMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIG 443

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +++++  + M  +G V P+   Y+ L++ +C   ++ +A  ++ ++  +GM  D+V +
Sbjct: 444 KMDDAMEKFNQMIDQG-VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 502

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           ++I     + G    A+ +     + G+ P      +++ GYC  GK+++ALR    M  
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            G+ PN V++  L+ G+ +I     +DE L+L +E     + P  I Y+ I++    AG 
Sbjct: 563 AGIEPNDVVYGTLVNGYCKI---GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 619

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
               K  F +M ++GI  +   Y+I+ +G  + +  ++A  L   +       N++   T
Sbjct: 620 TVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNT 679

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I+G      ++ A ++F  +   G+ P + T+  ++    +      AE++   M+  G
Sbjct: 680 MIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 739

Query: 489 VHPQ 492
             P 
Sbjct: 740 CEPD 743



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 190/386 (49%), Gaps = 2/386 (0%)

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P S  +  +++  + +   E A+  F ++  +GL       N L+KG+  A + +E++
Sbjct: 107 LSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEAL 166

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG--MKPDVVTYNTIA 255
            +L   + E    P++ +Y++L+++ C++    +A +++  MA  G    PDVV Y+T+ 
Sbjct: 167 DILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVI 226

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + + G+ ++A ++  EM   G+ P+  T   ++   CK   + +A  F R M   GV 
Sbjct: 227 DGFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 286

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN   +N LI G+           V   M+   + PDV+T S +M +    G + + +++
Sbjct: 287 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 346

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           FD M   G  P+  +Y+I+  GY  +       +L   M+  G  P++  F  +I  + +
Sbjct: 347 FDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYAN 406

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G +D+A+ +F++M +HGV P++ T+ T++       +   A E    M   GV P K  
Sbjct: 407 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 466

Query: 496 FLLLAEARRATGLTKEAKRILSKIKN 521
           +  L +     G   +AK ++S+I N
Sbjct: 467 YHCLIQGFCTHGSLLKAKELISEIMN 492



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 177/373 (47%), Gaps = 7/373 (1%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   +A  IFN + + G KP +VTY T++AAL    + +      +Q+ + G+ PD   +
Sbjct: 408 GMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAY 467

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           + +I  F   G++ +A +   ++  +G+      ++++I      G+  ++  + DL   
Sbjct: 468 HCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVN 527

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G + P    Y++L+  +C    + +A  V   M ++G++P+ V Y T+   Y + G  D
Sbjct: 528 VG-LHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRID 586

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +   +  EM   G++P+     III G  + G+   A      M E G+  N   +N+++
Sbjct: 587 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVL 646

Query: 326 KGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +G   +      DE + L KE R   V  ++IT +T++        +++ K++F  + ++
Sbjct: 647 RG---LFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRS 703

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ P    YSI+    ++E   E+AE++  +M  +G  P+  +   ++        + RA
Sbjct: 704 GLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 763

Query: 443 IEVFDKMCEHGVS 455
                K+ E   S
Sbjct: 764 GAYLSKIDERNFS 776



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 126/251 (50%), Gaps = 1/251 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + ++N+L + G+  +AQ IF+  +  G  P+ V Y+ L+    +  +      +   +  
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++P+ + +  ++N + + G ++E +  F +M + G+ P+T  YN +I G   AG+   
Sbjct: 563 AGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVP 622

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +      M+  G +  N  TYN+++R     +   EA  +  ++ A  +K +++T NT+ 
Sbjct: 623 AKVKFHEMTESG-IAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 681

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               Q    ++A+++   +  +G+ P   T  I+I+   KEG ++EA     +M+  G  
Sbjct: 682 AGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741

Query: 316 PNLVIFNLLIK 326
           P+  + N +++
Sbjct: 742 PDSRLLNHVVR 752



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/263 (23%), Positives = 120/263 (45%), Gaps = 36/263 (13%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LM+     GK ++A  +F+ ++  G +P+ V Y TL+       R +   S+  ++ + G
Sbjct: 540 LMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKG 599

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P +I +N +I+   E+G    A   F +M ESG+     TYN +++G       +E++
Sbjct: 600 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAI 659

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   + R  NVK N+ T N ++      + + EA ++   ++ SG+ P VVTY+ + T 
Sbjct: 660 FLFKEL-RAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITN 718

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGR--------------------------------- 284
             + G  ++AE++   M++ G +P+ R                                 
Sbjct: 719 LIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 778

Query: 285 --TCGIIISGYCKEGKIKEALRF 305
             T  +++  +  +G  +E +RF
Sbjct: 779 HLTTMLLVDLFSSKGTCREHIRF 801



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 25/110 (22%), Positives = 53/110 (48%), Gaps = 1/110 (0%)

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
           G   + P +H Y+IL     R   PE A      ++ +G   N++I   ++ G+C     
Sbjct: 103 GPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRT 162

Query: 440 DRAIEV-FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           D A+++   +  E G  P++ ++  L+    +  +  +A+++L++M   G
Sbjct: 163 DEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGG 212



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 24/127 (18%), Positives = 54/127 (42%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  ++  + +  + +EA+ +F ++   G  P +VTY+ ++  L  +        + S +
Sbjct: 676 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSM 735

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +  G +PDS   N V+    +   +  A     K+ E   +    T   L+  +   G  
Sbjct: 736 QNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTC 795

Query: 194 EESVKLL 200
            E ++ L
Sbjct: 796 REHIRFL 802


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 114/483 (23%), Positives = 234/483 (48%), Gaps = 35/483 (7%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++ + ++ G   EA  + ++++  G   +L   T+L+    +Q    S   +++++
Sbjct: 112 TFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEI 171

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY------ 187
            E+G+ P+ + ++ +I+   ++GN+E+A + + +MK  G+  +  + N++++GY      
Sbjct: 172 SESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSW 231

Query: 188 -------------GIA---------------GKPEESVKLLDLMSREGNVKPNLRTYNVL 219
                        G+A               GK  E+  L D +  +G + PN+ +YN +
Sbjct: 232 QNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKG-ISPNVVSYNNI 290

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +   C + NI  A  V  +M  +G  P+ VT+  +   Y + G+ + A  +   M+   +
Sbjct: 291 ILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANI 350

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            P   T GIII G CK G+  E           G  P  + +N +I GF++  + +    
Sbjct: 351 LPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASN 410

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           V   M E  + P  +TY+++++ +     +D   ++ +DM + G+K D  AY  L  G+ 
Sbjct: 411 VYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFC 470

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           + ++ + A ELL  +  +G  PN  I+ ++I+G+ +  +++ AI+++ KM   G+  +LK
Sbjct: 471 KRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLK 530

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+ +L+ G  ++ +   A +I   M + G+ P      +L       G  + A++IL  +
Sbjct: 531 TYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDM 590

Query: 520 KNK 522
             K
Sbjct: 591 NGK 593



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 105/399 (26%), Positives = 208/399 (52%), Gaps = 7/399 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L + GK  EA  +++ +I  G  P++V+Y  ++     +   N+   +  
Sbjct: 249 VFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYK 308

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +NG  P+++ F  +++ + + G++E A   F +MK++ + PT +T   +IKG   AG
Sbjct: 309 EMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAG 368

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E   L +    +G V P    YN ++  +  E NI  A NV  +M   G+ P  VTY
Sbjct: 369 RSFEGRDLFNKFVSQGFV-PTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTY 427

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++   + +    D A +++ +M+  G++ + +  G +I G+CK   +K A      ++ 
Sbjct: 428 TSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRG 487

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGF 368
            G+ PN  I+N +I GF  +   + V+E + L K+     +  D+ TY+++++    +G 
Sbjct: 488 AGLSPNRFIYNSMITGFKNM---NNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGR 544

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +    +I  +M   GI PD  A+++L  G   + + E A ++L  M      P+V+I+ T
Sbjct: 545 LLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNT 604

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           +I+G   +G++  A  + D+M + G+ P+  T++ L+ G
Sbjct: 605 LIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNG 643



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 199/433 (45%), Gaps = 2/433 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S+  ++   ++    Q A  +FN+ +E G   ++ T+ TLL+ L  + + N   ++ 
Sbjct: 214 SVYSLNSILEGYLKCQSWQNAFTMFNDALESG-LANVFTFNTLLSWLCKEGKMNEACNLW 272

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +V   G+ P+ + +N +I       N+  A   + +M ++G TP   T+  L+ GY   
Sbjct: 273 DEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKK 332

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E +  +   M ++ N+ P   T  ++++  C      E  ++ +K  + G  P  + 
Sbjct: 333 GDIENAFSIFHRM-KDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMP 391

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNTI   + + G  + A  V  EM   G+ P+  T   +I G+CK   I  AL+    MK
Sbjct: 392 YNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMK 451

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+  ++  +  LI GF +  D     E+L  ++   ++P+   Y++++  +     ++
Sbjct: 452 RKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVE 511

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  +++  M   GI  D   Y+ L  G ++      A ++   M+  G  P+    T +I
Sbjct: 512 EAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLI 571

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G C+ G  + A ++ + M    + P++  + TL+ G+ +      A  +   M   G+ 
Sbjct: 572 NGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLV 631

Query: 491 PQKSTFLLLAEAR 503
           P   T+ +L   +
Sbjct: 632 PDNITYDILVNGK 644



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/488 (22%), Positives = 214/488 (43%), Gaps = 38/488 (7%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C T+  M +   + ++ G   EA+  F      G +     Y+  +  L ++       S
Sbjct: 40  CFTLHVMLR---ACLKEGNILEAEQHFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALS 96

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++ ++   G  P    F +VI A  + GN+ EA+     M   G +   +   +L+KGY 
Sbjct: 97  LLREMRAAGWIPPEGTFTSVITACVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYC 156

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK--- 245
           + G    ++ L++ +S  G V PN  TY+VL+   C   NI +A+    +M   G++   
Sbjct: 157 MQGNLRSALVLVNEISESGLV-PNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSV 215

Query: 246 -------------------------------PDVVTYNTIATAYAQNGEADQAEEVIVEM 274
                                           +V T+NT+ +   + G+ ++A  +  E+
Sbjct: 216 YSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACNLWDEV 275

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G+ PN  +   II G+C++  I  A +  + M + G  PN V F +L+ G+ +  D 
Sbjct: 276 IAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDI 335

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           +    +   MK+  + P   T   I+     AG   + +++F+     G  P    Y+ +
Sbjct: 336 ENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTI 395

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G+++E     A  +   M E G  P+ V +T++I G+C   ++D A+++ + M   G+
Sbjct: 396 IDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGL 455

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
             ++K + TL+ G+ + R    A E+L  ++  G+ P +  +  +    +     +EA  
Sbjct: 456 KMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAID 515

Query: 515 ILSKIKNK 522
           +  K+ N+
Sbjct: 516 LYKKMVNE 523



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 89/382 (23%), Positives = 171/382 (44%), Gaps = 2/382 (0%)

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M P     N ++ A        EA +   KM   G+T    T + +++     G   E+ 
Sbjct: 1   MTPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAE 60

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +   L ++   V+ +   Y++ V   C + N   A +++ +M A+G  P   T+ ++ TA
Sbjct: 61  QHF-LQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITA 119

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G   +A  +  +M + G   N      ++ GYC +G ++ AL     + E G+ PN
Sbjct: 120 CVKEGNVAEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPN 179

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +++LI G  +  + +   E  + MK   +   V + ++I+  +           +F+
Sbjct: 180 KVTYSVLIDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFN 239

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           D  ++G+  +   ++ L     +E +  +A  L   +I  G  PNVV +  II G C   
Sbjct: 240 DALESGL-ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKD 298

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
           +++ A +V+ +M ++G +PN  TF  LM GY +      A  I   MK   + P  +T  
Sbjct: 299 NINAACKVYKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLG 358

Query: 498 LLAEARRATGLTKEAKRILSKI 519
           ++ +     G + E + + +K 
Sbjct: 359 IIIKGLCKAGRSFEGRDLFNKF 380



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/233 (25%), Positives = 109/233 (46%), Gaps = 2/233 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++   +      A  + N++   G K  +  Y TL+     ++   S H +++++
Sbjct: 426 TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL 485

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+ P+   +N++I  F    N+EEA+D + KM   G+     TY +LI G   +G+ 
Sbjct: 486 RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRL 545

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +  +   M  +G + P+ R + VL+   CN+     A  ++  M    M P V+ YNT
Sbjct: 546 LYASDIHTEMLSKG-ILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNT 604

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK-EGKIKEALRF 305
           +   + + G   +A  +  EM   G+ P+  T  I+++G  K +G     L F
Sbjct: 605 LIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVNGKFKGDGNFSRDLTF 657


>gi|242067353|ref|XP_002448953.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
 gi|241934796|gb|EES07941.1| hypothetical protein SORBIDRAFT_05g002330 [Sorghum bicolor]
          Length = 734

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 226/453 (49%), Gaps = 10/453 (2%)

Query: 75  MTKLMNSLIERGKPQEA-QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS---IHSIM 130
           + +L+  L +  +  EA   +   + E G  P  V+Y+ LL     + R      +  +M
Sbjct: 136 INQLLKGLCDGKRVGEAMDVLLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMM 195

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +        P+ + +  VI+   ++   + A   F +M ++G+ P   TYN LI GY   
Sbjct: 196 ANDHGRSCPPNVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSI 255

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK +E V++L+ MS  G +KP+  TY  L+   C    ++E  + +  M  +G+ PD   
Sbjct: 256 GKWKEVVQMLEKMSARG-LKPDCYTYGSLLNYLCA---LSEMHSFLDLMVENGLSPDHHI 311

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRFARTM 309
           +N   +AYA+ G  D+A ++  +M  +G+ PN    G +I   CK G++ +A ++F + +
Sbjct: 312 FNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMI 371

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            E GV PN+V+FN L+ G   +   +  +E++  M +  + P+ + ++T++      G +
Sbjct: 372 NE-GVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRV 430

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            + + + D M   G++PDA +Y+ L  GY      ++AE++   M+  G  P  V + T+
Sbjct: 431 MEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTL 490

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+CS   +D A  +F +M   GV+P + T+ T++ G  + ++   A+E+   M   G 
Sbjct: 491 LHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGT 550

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
                T+ ++      +    EA ++   + +K
Sbjct: 551 KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSK 583



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/512 (25%), Positives = 229/512 (44%), Gaps = 33/512 (6%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++  +  GK +E   +   +   G KP   TY +LL  L      + +HS +  + ENG
Sbjct: 248 LIHGYLSIGKWKEVVQMLEKMSARGLKPDCYTYGSLLNYLC---ALSEMHSFLDLMVENG 304

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   FN   +A+++ G +++AMD F KM++ GL+P    Y  LI      G+ +++ 
Sbjct: 305 LSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAE 364

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
              + M  EG V PN+  +N LV   C       A  ++++M   G+ P+ V +NT+   
Sbjct: 365 VKFNQMINEG-VTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICN 423

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G   +   +I  MEH GV+P+  +   +ISGYC  G+  EA +    M   G+ P 
Sbjct: 424 LCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPT 483

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
            V +N L+ G+        +D+   L +E     V P V+TY+TI++         + KE
Sbjct: 484 EVTYNTLLHGYCS---ASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKE 540

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           ++ +M  +G K D + Y+I+  G  +    ++A ++  ++   G   N++ FT +I    
Sbjct: 541 LYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALL 600

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G  + A+++F  +  +G+ PN+ T+  +     E       + +   M+  G  P   
Sbjct: 601 KGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 660

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPN 554
               L       G    A   LSK+                    ER +  EA+T S   
Sbjct: 661 MLNALVRRLLHRGDISRAGAYLSKLD-------------------ERNFSVEASTTS--- 698

Query: 555 LLQIPNVVSSDQKGSAAALKKGRMLLRDADSS 586
            L I    S + +  A +L +    L +A+SS
Sbjct: 699 -LLISIFTSDEYQHHAKSLPEKYHFLNEANSS 729



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/449 (23%), Positives = 212/449 (47%), Gaps = 4/449 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++ L +      A+ +F  +I+ G KP+  TY  L+       ++  +  ++ 
Sbjct: 207 VVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLE 266

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD   + +++N       M   +D    M E+GL+P    +N     Y   G
Sbjct: 267 KMSARGLKPDCYTYGSLLNYLCALSEMHSFLDL---MVENGLSPDHHIFNIFFSAYAKCG 323

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++++ + + M + G + PN+  Y  L+ A C    + +A    ++M   G+ P++V +
Sbjct: 324 MIDKAMDIFNKMRQHG-LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVF 382

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++        + ++AEE++ EM   G+ PN      +I   C  G++ E  R    M+ 
Sbjct: 383 NSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEH 442

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P+   +  LI G+      D  ++V   M    ++P  +TY+T+++ + +A  +D 
Sbjct: 443 VGVRPDAFSYTPLISGYCLAGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDD 502

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F +M + G+ P    Y+ +  G  + +   +A+EL + MI SG   ++  +  I++
Sbjct: 503 AYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILN 562

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C    +D A ++F  +C  G+  N+ TF  ++    +  +   A ++   + A G+ P
Sbjct: 563 GLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVP 622

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIK 520
              T+ L+AE     G  +E   + S ++
Sbjct: 623 NVVTYRLVAENLIEEGSLEEFDSLFSAME 651



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 176/380 (46%), Gaps = 6/380 (1%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P++  ++ +I      G ++ +  TF  + ++G        N L+KG     +  E++ +
Sbjct: 96  PNTCTYSILIGCLCRMGRLKHSFATFGLILKTGWRVNDIVINQLLKGLCDGKRVGEAMDV 155

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA---ASGMKPDVVTYNTIAT 256
           L     E    P+  +Y++L++ +CNE    EA  ++  MA        P+VVTY T+  
Sbjct: 156 LLQRMPELGCTPDTVSYSILLKGFCNENRAEEALELLRMMANDHGRSCPPNVVTYTTVID 215

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              +    D+AE V  +M  NGV+PN  T   +I GY   GK KE ++    M   G+ P
Sbjct: 216 GLCKAQLFDRAEGVFQQMIDNGVKPNNDTYNCLIHGYLSIGKWKEVVQMLEKMSARGLKP 275

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +   +  L+     + +   +   L LM E  ++PD   ++   +A++  G +DK  +IF
Sbjct: 276 DCYTYGSLLNYLCALSE---MHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIF 332

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           + M + G+ P+   Y  L     +    + AE     MI  G  PN+V+F +++ G C+ 
Sbjct: 333 NKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTV 392

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
              +RA E+  +M + G+ PN   F TL+       +      ++ +M+  GV P   ++
Sbjct: 393 DKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSY 452

Query: 497 LLLAEARRATGLTKEAKRIL 516
             L       G T EA+++ 
Sbjct: 453 TPLISGYCLAGRTDEAEKVF 472



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 61/312 (19%), Positives = 143/312 (45%), Gaps = 1/312 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++  C        L+ +L   G+  E + + + +   G +P   +YT L++   +  R 
Sbjct: 406 LDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLAGRT 465

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    +   +   G+ P  + +N +++ +  +  +++A   F +M   G+TP   TYNT+
Sbjct: 466 DEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTI 525

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           + G     +  E+ +L   M   G  K ++ TYN+++   C    + EA+ +   + + G
Sbjct: 526 LHGLFQTKRFSEAKELYLNMINSGT-KCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKG 584

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++ +++T+  +  A  + G  + A ++   +  NG+ PN  T  ++     +EG ++E  
Sbjct: 585 LQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFD 644

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M++ G  PN  + N L++  +   D       L+ + E   + +  T S +++ +
Sbjct: 645 SLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLISIF 704

Query: 364 STAGFMDKCKEI 375
           ++  +    K +
Sbjct: 705 TSDEYQHHAKSL 716


>gi|254939549|ref|NP_001157212.1| pentatricopeptide repeat10 [Zea mays]
 gi|218684531|gb|ACL01094.1| chloroplast pentatricopeptide repeat protein 10 [Zea mays]
 gi|223948163|gb|ACN28165.1| unknown [Zea mays]
 gi|413943497|gb|AFW76146.1| pentatricopeptide repeat10 [Zea mays]
          Length = 786

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 210/436 (48%), Gaps = 3/436 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   EA A F +L   GH P +VTY  LL        +     ++ ++E+NG  PD++ +
Sbjct: 259 GLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTY 318

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +   ++ +G  EEA      M   GL P   TYNT++  YG  GK +E++ L D M +
Sbjct: 319 NELAGTYARAGFFEEAARCLDTMASKGLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKK 378

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G V PN+ TYN+++     +   T    ++ +M+ SG  P+ VT+NT+     + G  D
Sbjct: 379 TGFV-PNVNTYNLVLGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMED 437

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
               V+  M   GV+ +  T   +I+ Y + G    A +    M   G  P +  +N L+
Sbjct: 438 YVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALL 497

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM-GKAGI 384
                  D      +++ M+     P+  +YS ++  ++  G +     I +++ G   +
Sbjct: 498 NVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLLQCYAKGGNVAGIAAIENEVYGSGAV 557

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P       L     + +  +  E     +   G++P++VIF +++S +  +G   +A E
Sbjct: 558 FPSWVILRTLVIANFKCRRLDGMETAFQEVKARGYNPDLVIFNSMLSIYAKNGMYSKATE 617

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK-AFGVHPQKSTFLLLAEAR 503
           VFD +   G+SP+L T+ +LM  Y++  + W AE+IL  +K +  + P   ++  +    
Sbjct: 618 VFDSIKRSGLSPDLITYNSLMDMYAKCSESWEAEKILNQLKCSQTMKPDVVSYNTVINGF 677

Query: 504 RATGLTKEAKRILSKI 519
              GL KEA+R+LS++
Sbjct: 678 CKQGLVKEAQRVLSEM 693



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 121/476 (25%), Positives = 217/476 (45%), Gaps = 8/476 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           VR+ T ++++L   G+ + A  +F  L   G  P+LVTY  +L     + + +  I +++
Sbjct: 174 VRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGRSWPRIVALL 233

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G++PD    + VI A    G ++EA+  F  +K  G  P   TYN L++ +G A
Sbjct: 234 DEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYNALLQVFGKA 293

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E++++L  M + G  +P+  TYN L   +       EA   +  MA+ G+ P+  T
Sbjct: 294 GNYTEALRVLGEMEQNG-CQPDAVTYNELAGTYARAGFFEEAARCLDTMASKGLLPNAFT 352

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+ TAY   G+ D+A  +  +M+  G  PN  T  +++    K+ +    L     M 
Sbjct: 353 YNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVMLEMLGEMS 412

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PN V +N ++    +    D V  VL  M+   V     TY+T++ A+   G   
Sbjct: 413 RSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAAYGRCGSRT 472

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              +++++M  AG  P    Y+ L     R+ +   A+ ++  M   GF PN   ++ ++
Sbjct: 473 NAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQSIVSKMRTKGFKPNEQSYSLLL 532

Query: 431 SGWCSDGSMDRAIEVFDKMCEHG-VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             +   G++     + +++   G V P+     TL+    + R+    E   Q +KA G 
Sbjct: 533 QCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQEVKARGY 592

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHK 545
           +P    F  +       G+  +A  +   IK    + ++     I   SL  +Y K
Sbjct: 593 NPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDL-----ITYNSLMDMYAK 643



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 178/382 (46%), Gaps = 12/382 (3%)

Query: 128 SIMSQVEENGMDPDSIF----FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           ++ + ++E  + P S      +  V++A S +G  E A++ F +++  G+ PT  TYN +
Sbjct: 156 AVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVV 215

Query: 184 IKGYGIAGKP-EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +  YG  G+     V LLD M R   V+P+  T + ++ A C +  + EA      + A 
Sbjct: 216 LDVYGRMGRSWPRIVALLDEM-RAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKAR 274

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P VVTYN +   + + G   +A  V+ EME NG QP+  T   +   Y + G  +EA
Sbjct: 275 GHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEA 334

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKEFRVNPDVITYSTI 359
            R   TM   G+ PN   +N ++  +  +     VDE LAL   MK+    P+V TY+ +
Sbjct: 335 ARCLDTMASKGLLPNAFTYNTVMTAYGNV---GKVDEALALFDQMKKTGFVPNVNTYNLV 391

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +             E+  +M ++G  P+   ++ +     +    +    +L  M   G 
Sbjct: 392 LGMLGKKSRFTVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGV 451

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
             +   + T+I+ +   GS   A +++++M   G +P + T+  L+   S       A+ 
Sbjct: 452 ELSRDTYNTLIAAYGRCGSRTNAFKMYNEMTSAGFTPCITTYNALLNVLSRQGDWSTAQS 511

Query: 480 ILQIMKAFGVHPQKSTFLLLAE 501
           I+  M+  G  P + ++ LL +
Sbjct: 512 IVSKMRTKGFKPNEQSYSLLLQ 533



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/360 (23%), Positives = 161/360 (44%), Gaps = 4/360 (1%)

Query: 145 FNAVINAFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
             +++ A   SG+ E A+    W  KE       S    +++  G  G+ +    LLD  
Sbjct: 107 ITSLLKALELSGHWEWALALLRWAGKEGA--ADASALEMVVRALGREGQHDAVCALLDET 164

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
                 + ++R Y  ++ A         A  +  ++   G+ P +VTYN +   Y + G 
Sbjct: 165 PLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQGVAPTLVTYNVVLDVYGRMGR 224

Query: 264 A-DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
           +  +   ++ EM   GV+P+G T   +I+  C++G + EA+ F   +K  G  P +V +N
Sbjct: 225 SWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEAVAFFEDLKARGHAPCVVTYN 284

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            L++ F +  +      VL  M++    PD +TY+ +   ++ AGF ++     D M   
Sbjct: 285 ALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGTYARAGFFEEAARCLDTMASK 344

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ P+A  Y+ +   Y    + ++A  L   M ++GF PNV  +  ++            
Sbjct: 345 GLLPNAFTYNTVMTAYGNVGKVDEALALFDQMKKTGFVPNVNTYNLVLGMLGKKSRFTVM 404

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           +E+  +M   G +PN  T+ T++    +         +L+ M++ GV   + T+  L  A
Sbjct: 405 LEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEDYVTRVLEGMRSCGVELSRDTYNTLIAA 464



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/240 (28%), Positives = 125/240 (52%), Gaps = 1/240 (0%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +S + L+    + G      AI N +   G   PS V   TL+ A    +R + + +   
Sbjct: 526 QSYSLLLQCYAKGGNVAGIAAIENEVYGSGAVFPSWVILRTLVIANFKCRRLDGMETAFQ 585

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +V+  G +PD + FN++++ ++++G   +A + F  +K SGL+P   TYN+L+  Y    
Sbjct: 586 EVKARGYNPDLVIFNSMLSIYAKNGMYSKATEVFDSIKRSGLSPDLITYNSLMDMYAKCS 645

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+L+ +     +KP++ +YN ++  +C +  + EA  V+ +M A GM P  VTY
Sbjct: 646 ESWEAEKILNQLKCSQTMKPDVVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTY 705

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +T+   Y+      +A EVI  M  +G++P   T   ++  YC+  + +EA  F   + E
Sbjct: 706 HTLVGGYSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVSE 765



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 96/200 (48%), Gaps = 6/200 (3%)

Query: 329 VEIMDRDGV-DEVLALMKEFRVNP----DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           V  + R+G  D V AL+ E  + P    DV  Y+T+++A S AG  ++  E+F ++ + G
Sbjct: 145 VRALGREGQHDAVCALLDETPLPPGSRLDVRAYTTVLHALSRAGRYERALELFAELRRQG 204

Query: 384 IKPDAHAYSILAKGYVREQEP-EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           + P    Y+++   Y R      +   LL  M  +G  P+    +T+I+  C DG +D A
Sbjct: 205 VAPTLVTYNVVLDVYGRMGRSWPRIVALLDEMRAAGVEPDGFTASTVIAACCRDGLVDEA 264

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           +  F+ +   G +P + T+  L+  + +A     A  +L  M+  G  P   T+  LA  
Sbjct: 265 VAFFEDLKARGHAPCVVTYNALLQVFGKAGNYTEALRVLGEMEQNGCQPDAVTYNELAGT 324

Query: 503 RRATGLTKEAKRILSKIKNK 522
               G  +EA R L  + +K
Sbjct: 325 YARAGFFEEAARCLDTMASK 344



 Score = 49.3 bits (116), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 27/117 (23%), Positives = 56/117 (47%), Gaps = 4/117 (3%)

Query: 57  QTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAA 116
           Q  CS  M  +    V S   ++N   ++G  +EAQ + + ++  G  P  VTY TL+  
Sbjct: 656 QLKCSQTMKPD----VVSYNTVINGFCKQGLVKEAQRVLSEMVADGMAPCAVTYHTLVGG 711

Query: 117 LTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL 173
            +  + F+    ++  + ++G+ P  + +  V+ ++  +   EEA     ++ E+ L
Sbjct: 712 YSSLEMFSEAREVIGYMVQHGLKPMELTYRRVVESYCRAKRFEEARGFLSEVSETDL 768


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  191 bits (486), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 210/430 (48%), Gaps = 8/430 (1%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           F  +I  G  PS+     +L  L   +  N   ++   + E+G+ P  I FN ++++  +
Sbjct: 228 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 287

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG-NVKPNL 213
           +G++E     + +MK   +  +  TYN LI G+   GK EE+ +    M R G  V P  
Sbjct: 288 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPY- 346

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            ++N L+  +C +    +AW V  +M  +G+ P   TYN    A    G  D A E++  
Sbjct: 347 -SFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSS 405

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M      P+  +   ++ GY K GK  EA      ++   +HP++V +N LI G  E  +
Sbjct: 406 M----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 461

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            +G   +   M    + PDVITY+T++  +   G +    E++D+M + GIKPD +AY+ 
Sbjct: 462 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 521

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFH-PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            A G +R  + +KA  L   M+ +  H P++ I+   I G C  G++ +AIE   K+   
Sbjct: 522 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 581

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G+ P+  T+ T++ GY E  Q   A  +   M    ++P   T+ +L       G  ++A
Sbjct: 582 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 641

Query: 513 KRILSKIKNK 522
            +  +++K +
Sbjct: 642 FQYSTEMKKR 651



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 216/465 (46%), Gaps = 41/465 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +VR+   ++  L +     +A A++  +IE G  P+++T+ T+L +         +  I 
Sbjct: 239 SVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIW 298

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++   ++   + +N +IN FS++G MEEA      M+ SG   T  ++N LI+GY   
Sbjct: 299 LEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQ 358

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +++  + D M   G + P   TYN+ + A C+   I +A  ++  MAA    PDVV+
Sbjct: 359 GLFDDAWGVTDEMLNAG-IYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVS 413

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+   Y + G+  +A  +  ++    + P+  T   +I G C+ G ++ A R    M 
Sbjct: 414 YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 473

Query: 311 EYGVHPNLVIFNLLIKGFV---------EIMD---RDGV--------------------D 338
              + P+++ +  L+KGFV         E+ D   R G+                    D
Sbjct: 474 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSD 533

Query: 339 EVLALMKEFRVN----PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           +   L +E        PD+  Y+  ++     G + K  E    + + G+ PD   Y+ +
Sbjct: 534 KAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 593

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            +GY+   + + A  L   M+    +P+V+ +  +I G    G +++A +   +M + GV
Sbjct: 594 IRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 653

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
            PN+ T   L++G  +A     A   L  M+  G+ P K ++ +L
Sbjct: 654 RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 698



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 124/511 (24%), Positives = 220/511 (43%), Gaps = 69/511 (13%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   + GK +EA+    ++   G   +  ++  L+     Q  F+    +  ++   G
Sbjct: 316 LINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAG 375

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P +  +N  I A  + G +++A +    M      P   +YNTL+ GY   GK  E+ 
Sbjct: 376 IYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKFVEAS 431

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L D + R G++ P++ TYN L+   C   N+  A  +  +M    + PDV+TY T+   
Sbjct: 432 LLFDDL-RAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKG 490

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNG-----RTCG------------------------- 287
           + +NG    A EV  EM   G++P+G     R  G                         
Sbjct: 491 FVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSDKAFRLHEEMVATDHHAP 550

Query: 288 ------IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE----IMDRDGV 337
                 + I G CK G + +A+ F R +   G+ P+ V +  +I+G++E     M R+  
Sbjct: 551 DLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRGYLENGQFKMARNLY 610

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           DE+L      R+ P VITY  ++   + AG +++  +   +M K G++P+   ++ L  G
Sbjct: 611 DEMLRK----RLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLYG 666

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             +    ++A   L  M E G  PN   +T +IS  C     +  ++++ +M +  + P+
Sbjct: 667 MCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYKEMLDKEIEPD 726

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
             T   L     +  +    +              K       +  RA+    EA+  L 
Sbjct: 727 GYTHRALFKHLEKDHESMALDS-----------SGKQPEQQQQQQPRASSGNGEARLKLR 775

Query: 518 KIKNKERTNEMEAEEDIPVE-------SLER 541
           +  N+E  +E E  ED+P++       SLER
Sbjct: 776 RTPNEE--HEPENYEDLPLDYSPSLFTSLER 804



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 161/332 (48%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   LM+  I+ GK  EA  +F++L  G   PS+VTY TL+  L           +  
Sbjct: 411 VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 470

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++    + PD I +  ++  F ++GN+  A + + +M   G+ P    Y T   G    G
Sbjct: 471 EMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLG 530

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +++ +L + M    +  P+L  YNV +   C   N+ +A     K+   G+ PD VTY
Sbjct: 531 DSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTY 590

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   Y +NG+   A  +  EM    + P+  T  ++I G+ K G++++A +++  MK+
Sbjct: 591 TTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKK 650

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV PN++  N L+ G  +  + D     L  M+E  + P+  +Y+ +++        ++
Sbjct: 651 RGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEE 710

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
             +++ +M    I+PD + +  L K   ++ E
Sbjct: 711 VVKLYKEMLDKEIEPDGYTHRALFKHLEKDHE 742



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 152/341 (44%), Gaps = 18/341 (5%)

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK--P 246
           I  KPE + +  + + R+ +VK + + +  ++        ++EA+ V  +    GM    
Sbjct: 132 IRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEID 191

Query: 247 DVVTYNTIAT------------AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           D++   +                Y +   A++      +M   G  P+ R C I++    
Sbjct: 192 DLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLR 251

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
               + +A     TM E+G+ P ++ FN ++    +  D + VD++   MK   +    +
Sbjct: 252 DSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEV 311

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           TY+ ++N +S  G M++ +    DM ++G     ++++ L +GY ++   + A  +   M
Sbjct: 312 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 371

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           + +G +P    +   I   C  G +D A E+   M     +P++ ++ TLM GY +  + 
Sbjct: 372 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKF 427

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
             A  +   ++A  +HP   T+  L +    +G  + A+R+
Sbjct: 428 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 468


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 191/382 (50%), Gaps = 3/382 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T LM   IE G    A  +   ++  G   + V+   L+     + R       + +V
Sbjct: 195 TFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEV 254

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E G  PD + FN+++N F   GN+ +A+D    M E G  P   TYN+LI G    G+ 
Sbjct: 255 SEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEF 314

Query: 194 EESVKLLD-LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
           E+++++L  ++ RE    PN  TYN L+ A C E  I  A ++   + + G+ PDV T+N
Sbjct: 315 EKAIEILQQMILRE--CSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFN 372

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+      +   D A E+  EM++ G +P+  T  I+I   C E ++KEAL   + M+  
Sbjct: 373 TLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESS 432

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G   N V++N LI G  +    +  +E+   M+   V+   +TY+T+++       +++ 
Sbjct: 433 GCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEA 492

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            ++ D M   G+KPD   Y+ L   + R  + EKA +++ TM  +G  P++  + T+I G
Sbjct: 493 SQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGG 552

Query: 433 WCSDGSMDRAIEVFDKMCEHGV 454
            C  G +D A ++   +   G+
Sbjct: 553 LCRAGRVDVASKLLRSVQMKGI 574



 Score =  186 bits (472), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 214/444 (48%), Gaps = 1/444 (0%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           +N+L+E  K +  + + + ++  G    + T+  L+ AL    +      ++ ++  +G+
Sbjct: 130 LNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEEMANHGL 189

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            PD I F  ++  F E G++  A+    +M   G   T  +   L+ G+   G+ EE+++
Sbjct: 190 KPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALR 249

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
            +  +S EG   P+  T+N LV  +C   N+ +A +++  M   G  PDV TYN++ +  
Sbjct: 250 FVLEVSEEG-FSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGM 308

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
            + GE ++A E++ +M      PN  T   +IS  CKE +I+ A   AR +   G+ P++
Sbjct: 309 CKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDV 368

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
             FN LI+G     ++D   E+   MK     PD  TYS ++++      + +   +  +
Sbjct: 369 CTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKE 428

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M  +G   +A  Y+ L  G  + +  E AEE+   M   G   + V + T+I G C +  
Sbjct: 429 MESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKR 488

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           ++ A ++ D+M   G+ P+  T+ +L+  +       +A +I+Q M + G  P   T+  
Sbjct: 489 VEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGT 548

Query: 499 LAEARRATGLTKEAKRILSKIKNK 522
           L       G    A ++L  ++ K
Sbjct: 549 LIGGLCRAGRVDVASKLLRSVQMK 572



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/390 (28%), Positives = 198/390 (50%), Gaps = 12/390 (3%)

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
           H P L    TLL  LT    F+SI +++ Q++ +G  P++  F  +I +F+    +E  +
Sbjct: 52  HHP-LPPNETLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLL 110

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL----MSREGNVKPNLRTYNV 218
                  E G  P T+ YN  +     A   +  +KL+++    M  EG V  ++ T+NV
Sbjct: 111 KILEN--ELGFKPDTNFYNIALN----ALVEDNKLKLVEMLHSKMVNEGIVL-DVSTFNV 163

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L++A C    +  A  ++ +MA  G+KPD +T+ T+   + + G+ + A ++  +M   G
Sbjct: 164 LIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYG 223

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
                 +  ++++G+CKEG+++EALRF   + E G  P+ V FN L+ GF  I + +   
Sbjct: 224 CLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDAL 283

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           +++  M E   +PDV TY+++++     G  +K  EI   M      P+   Y+ L    
Sbjct: 284 DIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISAL 343

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +E E E A +L   ++  G  P+V  F T+I G C   + D A+E+F++M   G  P+ 
Sbjct: 344 CKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDE 403

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFG 488
            T+  L+      R+   A  +L+ M++ G
Sbjct: 404 FTYSILIDSLCYERRLKEALMLLKEMESSG 433



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 192/397 (48%), Gaps = 1/397 (0%)

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNME 159
           E G KP    Y   L AL    +   +  + S++   G+  D   FN +I A  ++  + 
Sbjct: 116 ELGFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLR 175

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
            A+    +M   GL P   T+ TL++G+   G    ++K+   M   G +  N+ +  VL
Sbjct: 176 PAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNV-SVKVL 234

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           V  +C E  + EA   + +++  G  PD VT+N++   + + G  + A +++  M   G 
Sbjct: 235 VNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGF 294

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            P+  T   +ISG CK G+ ++A+   + M      PN V +N LI    +  + +   +
Sbjct: 295 DPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATD 354

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +  ++    + PDV T++T++     +   D   E+F++M   G KPD   YSIL     
Sbjct: 355 LARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLC 414

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
            E+  ++A  LL  M  SG   N V++ T+I G C    ++ A E+FD+M   GVS +  
Sbjct: 415 YERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSV 474

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           T+ TL+ G  + ++   A +++  M   G+ P K T+
Sbjct: 475 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTY 511



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 188/395 (47%), Gaps = 2/395 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L+N     G   +A  I + +IE G  P + TY +L++ +     F     I+ Q+
Sbjct: 265 TFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQM 324

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
                 P+++ +N +I+A  +   +E A D    +   GL P   T+NTLI+G  ++   
Sbjct: 325 ILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQ 384

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + ++++ + M  +G  KP+  TY++L+ + C E+ + EA  ++ +M +SG   + V YNT
Sbjct: 385 DIAMEMFEEMKNKG-CKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNT 443

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     ++   + AEE+  +ME  GV  +  T   +I G CK  +++EA +    M   G
Sbjct: 444 LIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEG 503

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P+   +N L+  F  + D +   +++  M      PD+ TY T++     AG +D   
Sbjct: 504 LKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVAS 563

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           ++   +   GI    HAY+ + +     +  ++   L   M+E    P+ +    +  G 
Sbjct: 564 KLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFRGL 623

Query: 434 CSDGS-MDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           C+ G  +  AI+   +M E G+ P   +F  L  G
Sbjct: 624 CNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEG 658



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 188/407 (46%), Gaps = 12/407 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ + + G+ ++A  I   +I     P+ VTY TL++AL  +    +   +  
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLAR 357

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ PD   FN +I     S N + AM+ F +MK  G  P   TY+ LI       
Sbjct: 358 ILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYER 417

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E++ LL  M   G  + N   YN L+   C  + I +A  +  +M   G+    VTY
Sbjct: 418 RLKEALMLLKEMESSGCAR-NAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTY 476

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+     +N   ++A +++ +M   G++P+  T   +++ +C+ G I++A    +TM  
Sbjct: 477 NTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMAS 536

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVNPDVIT---YSTIMNAWSTAG 367
            G  P++  +  LI G      R G VD    L++  ++   V+T   Y+ ++ A     
Sbjct: 537 NGCEPDIFTYGTLIGGLC----RAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRK 592

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP-EKAEELLMTMIESGFHPNVVIF 426
              +   +F +M +    PDA  + I+ +G      P ++A +  + M+E G  P    F
Sbjct: 593 RTKEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSF 652

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
             +  G CS    D  IE+ + + E       +T  +++ G+ + R+
Sbjct: 653 GFLAEGLCSLSMEDTLIELINMVMEKAQMSERET--SMIRGFLKIRK 697



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/285 (21%), Positives = 121/285 (42%), Gaps = 37/285 (12%)

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+     Q+   D    ++ +++ +G  PN  T   +I  +    +I+  L+      E 
Sbjct: 60  TLLLQLTQSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTNFHEIENLLKILE--NEL 117

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G  P+   +N+ +   VE      V+ + + M    +  DV T++ ++ A   A  +   
Sbjct: 118 GFKPDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPA 177

Query: 373 KEIFDDMGKAGIKPDAHAYS-----------------------------------ILAKG 397
             + ++M   G+KPD   ++                                   +L  G
Sbjct: 178 ILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNG 237

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           + +E   E+A   ++ + E GF P+ V F ++++G+C  G+++ A+++ D M E G  P+
Sbjct: 238 FCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPD 297

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           + T+ +L+ G  +  +  +A EILQ M      P   T+  L  A
Sbjct: 298 VYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISA 342


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 209/445 (46%), Gaps = 6/445 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L++      +P+ A A+F  L+  G  P + +Y TL+   + +   +  + + 
Sbjct: 121 TIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELF 180

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ E  + PD + +N++I+   ++  M ++     +M ++G+ P   TYN+LI GY  A
Sbjct: 181 YKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTA 240

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +ESV++   MS  G + P +   N  + A C    I EA ++   M   G KP++++
Sbjct: 241 GMWKESVRVFKEMSSSGLI-PCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIIS 299

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+T+   YA  G       ++  M   G+ PN R   I+I+ Y + G + +A+     M+
Sbjct: 300 YSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQ 359

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P+ V F  +I     I   D        M +  V P    Y  ++      G + 
Sbjct: 360 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELV 419

Query: 371 KCKEIFDDMGKAGIKPDAHAY-SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           K KE+  +M    I P    Y S +     +E    + ++++  M+++G  PNVV F ++
Sbjct: 420 KAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSL 479

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+C  G+M+ A  + D M   G+ PN   + TL+ GY +  +   A  + + M   GV
Sbjct: 480 MEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGV 539

Query: 490 HPQKSTFLL----LAEARRATGLTK 510
            P    + +    L +ARR T   K
Sbjct: 540 KPTSVLYNIILHGLFQARRTTAAKK 564



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/419 (26%), Positives = 194/419 (46%), Gaps = 2/419 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P++ TY  L+       R     ++  ++   G+ PD   +N +I+ FS+ G +++A + 
Sbjct: 120 PTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYEL 179

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F+KM E  ++P   TYN+LI G     +  +S ++L+ M   G ++PN +TYN L+  + 
Sbjct: 180 FYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAG-IRPNNKTYNSLIYGYS 238

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
                 E+  V  +M++SG+ P VV  N+   A  ++    +A+++   M   G +PN  
Sbjct: 239 TAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNII 298

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           +   ++ GY  EG           M   G+ PN   FN+LI  +      D    +   M
Sbjct: 299 SYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDM 358

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
           +   + PD +T++T++++    G +D     F+ M   G+ P    Y  L +G     E 
Sbjct: 359 QNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGEL 418

Query: 405 EKAEELLMTMIESGF-HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            KA+EL+  M+      P V  F++II+    +G +    ++ D M + G  PN+ TF +
Sbjct: 419 VKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNS 478

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           LM GY        A  +L  M + G+ P    +  L +     G   +A  +   + +K
Sbjct: 479 LMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 537



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 118/517 (22%), Positives = 232/517 (44%), Gaps = 49/517 (9%)

Query: 48  NSKPTDSQPQTHCSFCMNKESCRTVRSMTK------------LMNSLIERGKPQEAQAIF 95
           N+K  +S    + +  M KES R  + M+              +++L    + +EA+ IF
Sbjct: 226 NNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIF 285

Query: 96  NNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSES 155
           ++++  G KP++++Y+TLL     +  F +++S+++ +   G+ P+  FFN +INA++  
Sbjct: 286 DSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARC 345

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
           G M++AM  F  M+  G+ P T T+ T+I      G+ ++++   + M   G V P+   
Sbjct: 346 GMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG-VPPSEAV 404

Query: 216 YNVLVRAWCN------------------------------------EKNITEAWNVMHKM 239
           Y  L++  CN                                    E  + E  ++M  M
Sbjct: 405 YRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLM 464

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
             +G +P+VVT+N++   Y   G  ++A  ++  M   G++PN    G ++ GYCK G+I
Sbjct: 465 VQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRI 524

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            +AL   R M   GV P  V++N+++ G  +        ++   M E      + TY  +
Sbjct: 525 DDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVV 584

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +         D+   + + +    +K D   ++I+    ++    ++A+EL   +   G 
Sbjct: 585 LGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGL 644

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            P V  +  +IS    + S + A  +F  + + G +P+ +    ++    +  +  +A  
Sbjct: 645 VPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASN 704

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
            L I+    +  + ST  LLA      G  +E  ++L
Sbjct: 705 YLSIIDENNLTLEASTISLLASLFSREGKCREHIKLL 741



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/328 (24%), Positives = 139/328 (42%), Gaps = 38/328 (11%)

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
           + W   H   A+   P + TYN +   Y +    + A  V   +   G+ P+  +   +I
Sbjct: 108 DRWACPH---AAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCSYNTLI 164

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
            G+ KEG++ +A      M E  V P++V +N LI G  +  +    + VL  M +  + 
Sbjct: 165 DGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIR 224

Query: 351 PDVITYSTIMNAWSTAGF-----------------------------------MDKCKEI 375
           P+  TY++++  +STAG                                    + + K+I
Sbjct: 225 PNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDI 284

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           FD M   G KP+  +YS L  GY  E        L+  M+  G  PN   F  +I+ +  
Sbjct: 285 FDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYAR 344

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G MD+A+ +F+ M   G+ P+  TF T++       +   A      M   GV P ++ 
Sbjct: 345 CGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAV 404

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKE 523
           +  L +     G   +AK ++S++ NK+
Sbjct: 405 YRCLIQGCCNHGELVKAKELISEMMNKD 432


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/426 (24%), Positives = 222/426 (52%), Gaps = 3/426 (0%)

Query: 93  AIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAF 152
           A+ + ++  G +P LVTY  ++  L  +   +   ++++++E+  ++P  + +N +I+  
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKP 211
            +  +M++A++ F +M+  G+ P   TY++LI      G+  ++ +LL D++ R+  + P
Sbjct: 62  CKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERK--INP 119

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           ++ T++ L+ A+  E  + EA  +  +M    + P +VTY+++   +  +   D+A+++ 
Sbjct: 120 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
             M      P+  T   +I G+CK  +++E +   R M + G+  N V +N+LI+G  + 
Sbjct: 180 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
            D D   E+   M    V P+++TY+T+++     G ++K   +F+ + ++ ++P  + Y
Sbjct: 240 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 299

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           +I+ +G  +  + E   +L   +   G  P+VV + T+ISG+C  GS + A  +F +M E
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            G  PN   + TL+           + E+++ M++ G     ST  L+        L K 
Sbjct: 360 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHDGRLDKS 419

Query: 512 AKRILS 517
              +LS
Sbjct: 420 FLDMLS 425



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 203/387 (52%), Gaps = 25/387 (6%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEG--------------------GHKPSLVTYTTLLAAL 117
           L+N + E+GK +    I+N +I+G                    G +P++VTY++L++ L
Sbjct: 38  LLNKM-EQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 96

Query: 118 TIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT 177
               R++    ++S + E  ++PD   F+A+I+AF + G + EA   + +M +  + P+ 
Sbjct: 97  CNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSI 156

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
            TY++LI G+ +  + +E+ ++ + M  + +  P++ TYN L++ +C  K + E   V  
Sbjct: 157 VTYSSLINGFCMHDRLDEAKQMFEFMVSK-HCFPDVVTYNTLIKGFCKYKRVEEGMEVFR 215

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           +M+  G+  + VTYN +     Q G+ D A+E+  EM  +GV PN  T   ++ G CK G
Sbjct: 216 EMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNG 275

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD-RDGVDEVLALMKEFRVNPDVITY 356
           K+++A+     ++   + P +  +N++I+G  +     DG D    L  +  V PDV+ Y
Sbjct: 276 KLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLK-GVKPDVVAY 334

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           +T+++ +   G  ++   +F +M + G  P++  Y+ L +  +R+ + E + EL+  M  
Sbjct: 335 NTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 394

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAI 443
            GF  +      +++    DG +D++ 
Sbjct: 395 CGFAGDASTI-GLVTNMLHDGRLDKSF 420



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 189/394 (47%), Gaps = 1/394 (0%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           +++ ++   G  PD + +  V+N   + G+ + A +   KM++  L P    YNT+I G 
Sbjct: 2   ALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGL 61

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
                 ++++ L   M  +G ++PN+ TY+ L+   CN    ++A  ++  M    + PD
Sbjct: 62  CKYKHMDDALNLFKEMETKG-IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           V T++ +  A+ + G+  +AE++  EM    + P+  T   +I+G+C   ++ EA +   
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M      P++V +N LIKGF +    +   EV   M +  +  + +TY+ ++     AG
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
             D  +EIF +M   G+ P+   Y+ L  G  +  + EKA  +   +  S   P +  + 
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +I G C  G ++   ++F  +   GV P++  + T++ G+        A+ + + MK  
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKED 360

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           G  P    +  L  AR   G  + +  ++ ++++
Sbjct: 361 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRS 394



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 183/383 (47%), Gaps = 1/383 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N L +RG    A  + N + +G  +P ++ Y T++  L   K  +   ++  ++E  G
Sbjct: 22  VVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKG 81

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ + ++++I+     G   +A      M E  + P   T++ LI  +   GK  E+ 
Sbjct: 82  IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE 141

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL D M +  ++ P++ TY+ L+  +C    + EA  +   M +    PDVVTYNT+   
Sbjct: 142 KLYDEMVKR-SIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKG 200

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + +    ++  EV  EM   G+  N  T  I+I G  + G    A    + M   GV PN
Sbjct: 201 FCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPN 260

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ +N L+ G  +    +    V   ++  ++ P + TY+ ++     AG ++   ++F 
Sbjct: 261 IMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFC 320

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           ++   G+KPD  AY+ +  G+ R+   E+A+ L   M E G  PN   + T+I     DG
Sbjct: 321 NLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDG 380

Query: 438 SMDRAIEVFDKMCEHGVSPNLKT 460
             + + E+  +M   G + +  T
Sbjct: 381 DREASAELIKEMRSCGFAGDAST 403



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 82/300 (27%), Positives = 149/300 (49%), Gaps = 2/300 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+++ ++ GK  EA+ +++ +++    PS+VTY++L+    +  R +    +  
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +      PD + +N +I  F +   +EE M+ F +M + GL   T TYN LI+G   AG
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + + ++   M  +G V PN+ TYN L+   C    + +A  V   +  S M+P + TY
Sbjct: 241 DCDMAQEIFKEMVSDG-VPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 299

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     + G+ +   ++   +   GV+P+      +ISG+C++G  +EA    + MKE
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PN   +N LI+  +   DR+   E++  M+      D  T   + N     G +DK
Sbjct: 360 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNMLHD-GRLDK 418



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 159/323 (49%), Gaps = 1/323 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L   G+  +A  + +++IE    P + T++ L+ A   + +      +  
Sbjct: 86  VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 145

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +  +DP  + ++++IN F     ++EA   F  M      P   TYNTLIKG+    
Sbjct: 146 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYK 205

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE +++   MS+ G V  N  TYN+L++      +   A  +  +M + G+ P+++TY
Sbjct: 206 RVEEGMEVFREMSQRGLV-GNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTY 264

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+     +NG+ ++A  V   ++ + ++P   T  I+I G CK GK+++       +  
Sbjct: 265 NTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSL 324

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P++V +N +I GF     ++  D +   MKE    P+   Y+T++ A    G  + 
Sbjct: 325 KGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREA 384

Query: 372 CKEIFDDMGKAGIKPDAHAYSIL 394
             E+  +M   G   DA    ++
Sbjct: 385 SAELIKEMRSCGFAGDASTIGLV 407



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 124/243 (51%), Gaps = 1/243 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ + + L+N      +  EA+ +F  ++     P +VTY TL+      KR      + 
Sbjct: 155 SIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVF 214

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G+  +++ +N +I    ++G+ + A + F +M   G+ P   TYNTL+ G    
Sbjct: 215 REMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKN 274

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK E+++ + + + R   ++P + TYN+++   C    + + W++   ++  G+KPDVV 
Sbjct: 275 GKLEKAMVVFEYLQRS-KMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVA 333

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+ + + + G  ++A+ +  EM+ +G  PN      +I    ++G  + +    + M+
Sbjct: 334 YNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMR 393

Query: 311 EYG 313
             G
Sbjct: 394 SCG 396



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 114/228 (50%), Gaps = 1/228 (0%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F ++K     V +   L+    +  + +E   +F  + + G   + VTY  L+  L    
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
             +    I  ++  +G+ P+ + +N +++   ++G +E+AM  F  ++ S + PT  TYN
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            +I+G   AGK E+   L   +S +G VKP++  YN ++  +C + +  EA  +  +M  
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKG-VKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
            G  P+   YNT+  A  ++G+ + + E+I EM   G   +  T G++
Sbjct: 360 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 407


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 203/425 (47%), Gaps = 8/425 (1%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            +A  +F  L   G KP+  TYTT++  L   +R     +   +        D I +  V
Sbjct: 316 DDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEA------LDVISYTTV 369

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           I   ++S  ++EA + F K+K +G +P    Y  +I G   AG+ E+ +K  + MS    
Sbjct: 370 IKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSC 429

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V P   TY V++   C  + + +A  V  +M   G  PD +TY T+   +++  + D+A 
Sbjct: 430 V-PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 488

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           +++  M   G +P   T G I+ G+CK   I EA      M+E G  P L IF  L+  +
Sbjct: 489 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 548

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
           +     +   +VL  M      PDVI Y+++++   + G + + + +FD M + G  PDA
Sbjct: 549 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDA 608

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y  + + + +    E A E+L  M +SG  P+   + +++ G+     +D+A  V+D+
Sbjct: 609 LTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDR 668

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL-QIMKAFGVHPQKSTFLLLAEARRATG 507
           M   G+ PN  TF  LM G  +  +  RA  +  ++++   V P   ++ +L +     G
Sbjct: 669 MVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAG 728

Query: 508 LTKEA 512
              EA
Sbjct: 729 RVSEA 733



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 207/425 (48%), Gaps = 11/425 (2%)

Query: 64  MNKESCRTVRS-MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+  SC   R+  T +++ L +     +A  +F  +++ G  P  +TYTTL+   +   +
Sbjct: 424 MSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASK 483

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    ++  +   G +P ++ + ++++ F +   + EA +   +M+E G  P    + +
Sbjct: 484 MDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTS 543

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+  Y   G+ EE+ ++L  M+  G   P++  Y  L+    +   + EA +V   M   
Sbjct: 544 LLSYYLSKGRAEEAYQVLTEMTARG-CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK 602

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  PD +TY TI   +++ G  + A E++  M  +GV P+      ++ GY K  ++ +A
Sbjct: 603 GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQA 662

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEF----RVNPDVITYS 357
                 M   G+ PN V FN+L+ G      +DG  D   +L KE      V P +++Y+
Sbjct: 663 FGVYDRMVASGIKPNAVTFNVLMHGLF----KDGKTDRAFSLFKEMLEKDEVPPTLVSYT 718

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++    AG + +    F +M   GI P+ H Y+ L     +     +A++L+  M++ 
Sbjct: 719 ILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL 778

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G +P+V  ++ +I+G      +D A +VF +M + G +PN  T++ L  G+  A +    
Sbjct: 779 GVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDL 838

Query: 478 EEILQ 482
           E + Q
Sbjct: 839 EAVKQ 843



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 118/472 (25%), Positives = 211/472 (44%), Gaps = 37/472 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++  L +  +  EA  +F  L   G  P++V YT ++  L    R         
Sbjct: 363 VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE 422

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +   P    +  VI+   ++  + +A   F +M + G  P T TY TLI G+  A 
Sbjct: 423 DMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKAS 482

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E+ KLLD+M  +G  +P   TY  +V  +C    I EA  V+ +M   G +P +  +
Sbjct: 483 KMDEARKLLDVMLTKGP-EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 541

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++ + Y   G A++A +V+ EM   G  P+      +I      G++ EA     +M E
Sbjct: 542 TSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIE 601

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P+ + +  +I+ F +I + +   E+L LM +  V PD   Y+++M+ +     +D+
Sbjct: 602 KGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQ 661

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG-FHPNVVIFTTII 430
              ++D M  +GIKP+A  +++L  G  ++ + ++A  L   M+E     P +V +T +I
Sbjct: 662 AFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILI 721

Query: 431 SGWCSDGSMDRAIEVFDKMCEHG-----------------------------------VS 455
            G    G +  A   F +M + G                                   V+
Sbjct: 722 DGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 781

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           P+++ +  L+ G  ++     A ++ Q M   G  P + T+ +L    RA G
Sbjct: 782 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 833



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 208/460 (45%), Gaps = 33/460 (7%)

Query: 64  MNKESC--RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           M K  C    V  MT L+ +L   GK  EA  ++  +IE G++P L    +L+ AL    
Sbjct: 185 MRKSGCLGDYVTFMT-LIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAG 243

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
           + +  + I   V    +    + +N++++ + + G +++ +    +M E    P   TYN
Sbjct: 244 KVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYN 303

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL---------------------- 219
            L+ G+  A + +++++L  L+S  G  KPN  TY  +                      
Sbjct: 304 ILVAGFSRANRLDDALELFKLLSSYG-CKPNAATYTTIIQGLYDAQRMEEAKAFFDEALD 362

Query: 220 -------VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
                  ++   + K I EA  +  K+  +G  P+VV Y  +     + G  +   +   
Sbjct: 363 VISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE 422

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           +M  +   P   T  ++I G CK   + +A +    M + G  P+ + +  LI GF +  
Sbjct: 423 DMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKAS 482

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
             D   ++L +M      P  +TY +I++ +     +++ KE+   M + G +P    ++
Sbjct: 483 KMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFT 542

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            L   Y+ +   E+A ++L  M   G  P+V+++T++I    S G +  A  VFD M E 
Sbjct: 543 SLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK 602

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           G +P+  T+ T++  +S+      A EIL++M   GV P 
Sbjct: 603 GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPD 642



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/486 (23%), Positives = 223/486 (45%), Gaps = 41/486 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT------------ 118
           T+ S   +++ L    K  EA   FN++I+ G +P ++ +TTL+                
Sbjct: 54  TIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHMLL 113

Query: 119 --IQKRF--------NSIHS------------IMSQVEENGMDPDSIFFNAVINAFSESG 156
               KRF        + IH             I+ ++   G  PD+  +  +I+   + G
Sbjct: 114 NQALKRFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLG 173

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            ++EA + F +M++SG      T+ TLI+     GK +E+ +L   M   G  +P L   
Sbjct: 174 RVDEAYELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERG-YEPYLEVQ 232

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           + L+ A C    + EA  +   + A  +    V YN++   Y + G  D   +++++M  
Sbjct: 233 DSLIFALCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVE 292

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
               P+ +T  I+++G+ +  ++ +AL   + +  YG  PN   +  +I+G   + D   
Sbjct: 293 CDNFPDIQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQG---LYDAQR 349

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
           ++E  A   E     DVI+Y+T++   + +  +D+  E+F+ +  AG  P+  AY+ +  
Sbjct: 350 MEEAKAFFDE---ALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVID 406

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G ++    E   +    M  S   P    +T +I G C    +  A +VF++M + G  P
Sbjct: 407 GLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVP 466

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +  T+ TL+ G+S+A +   A ++L +M   G  P   T+  +        +  EAK ++
Sbjct: 467 DTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVI 526

Query: 517 SKIKNK 522
           ++++ +
Sbjct: 527 AQMRER 532



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 214/452 (47%), Gaps = 22/452 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N L +  K  +A  +F  +   G +P++V+Y T+++ L    + +  +   + + +NG
Sbjct: 26  VLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNG 85

Query: 138 MDPDSIFFNAVINAFSESGN-------MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +PD I F  +I+ F ++G        + +A+  F         P    Y ++I GY  A
Sbjct: 86  CEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR--------PDVFLYTSVIHGYCKA 137

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +   K+L+ M   G + P+   Y VL+   C    + EA+ +  +M  SG   D VT
Sbjct: 138 GDLDTGFKILEEMLAAGCI-PDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVT 196

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           + T+  A + +G+ D+A E+  EM   G +P       +I   CK GK+ EA    +T+ 
Sbjct: 197 FMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVV 256

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              V  + V +N L+ G+ ++   D   ++L  M E    PD+ TY+ ++  +S A  +D
Sbjct: 257 AKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLD 316

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              E+F  +   G KP+A  Y+ + +G    Q  E+A+      +      +V+ +TT+I
Sbjct: 317 DALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVI 370

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G      +D A E+F+K+   G SPN+  +  ++ G  +A +     +  + M      
Sbjct: 371 KGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCV 430

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P ++T+ ++ +      +  +A ++  ++  K
Sbjct: 431 PTRTTYTVVIDGLCKAQMLPDACKVFEQMVQK 462



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 98/447 (21%), Positives = 200/447 (44%), Gaps = 7/447 (1%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +++   + G       I   ++  G  P    Y  L+  L    R +  + +  ++ +
Sbjct: 128 TSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRK 187

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +G   D + F  +I A S  G ++EA + + +M E G  P     ++LI     AGK +E
Sbjct: 188 SGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDE 247

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + ++   +  +  V  +   YN L+  +C    + +   ++ +M      PD+ TYN + 
Sbjct: 248 ANEIYQTVVAK-KVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILV 306

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             +++    D A E+   +   G +PN  T   II G     +++EA  F      +   
Sbjct: 307 AGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAF------FDEA 360

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            +++ +  +IKG  +    D   E+   +K    +P+V+ Y+ +++    AG ++   + 
Sbjct: 361 LDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKN 420

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F+DM  +   P    Y+++  G  + Q    A ++   M++ G  P+ + +TT+I G+  
Sbjct: 421 FEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSK 480

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              MD A ++ D M   G  P   T+ +++ G+ +      A+E++  M+  G  P    
Sbjct: 481 ASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFI 540

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNK 522
           F  L     + G  +EA ++L+++  +
Sbjct: 541 FTSLLSYYLSKGRAEEAYQVLTEMTAR 567



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/392 (23%), Positives = 180/392 (45%), Gaps = 8/392 (2%)

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++   G+ PD +  N V+N   ++  +++A++ F +M   G  PT  +YNT+I G   
Sbjct: 8   LKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLAS 67

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
             K +E+ K  + M   G  +P++  +  L+  +C      +  +++   A    +PDV 
Sbjct: 68  IDKMDEAYKFFNSMIDNG-CEPDVIAFTTLIHGFCKAGQ-PQVGHMLLNQALKRFRPDVF 125

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y ++   Y + G+ D   +++ EM   G  P+     ++I   CK G++ EA      M
Sbjct: 126 LYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERM 185

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           ++ G   + V F  LI+        D   E+   M E    P +    +++ A   AG +
Sbjct: 186 RKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKV 245

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D+  EI+  +    +     AY+ L  GY +    +   +LL+ M+E    P++  +  +
Sbjct: 246 DEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNIL 305

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           ++G+     +D A+E+F  +  +G  PN  T+ T++ G  +A++   A+      +A  V
Sbjct: 306 VAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFD--EALDV 363

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
               +    LA+++R      EA  +  K+K 
Sbjct: 364 ISYTTVIKGLADSKR----IDEACELFEKLKT 391



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/459 (21%), Positives = 206/459 (44%), Gaps = 7/459 (1%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           MEEA+D   +M  +GL P     N ++ G   A K +++++L   M   G  +P + +YN
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMG-CEPTIVSYN 59

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++    +   + EA+   + M  +G +PDV+ + T+   + + G+  Q   +++     
Sbjct: 60  TVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQP-QVGHMLLNQALK 118

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
             +P+      +I GYCK G +    +    M   G  P+   + +LI    ++   D  
Sbjct: 119 RFRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEA 178

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E+   M++     D +T+ T++ A S  G +D+  E++ +M + G +P       L   
Sbjct: 179 YELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFA 238

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             +  + ++A E+  T++      + V + +++ G+C  G +D  +++  +M E    P+
Sbjct: 239 LCKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPD 298

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           ++T+  L+ G+S A +   A E+ +++ ++G  P  +T+  + +        +EAK    
Sbjct: 299 IQTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFD 358

Query: 518 K-IKNKERTNEMEAEEDIP-VESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKK 575
           + +     T  ++   D   ++    L+ K  T    PN++    V+    K  A  ++ 
Sbjct: 359 EALDVISYTTVIKGLADSKRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLK--AGRIED 416

Query: 576 GRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQ 614
           G     D   S       T ++ +   CK+   LP  C+
Sbjct: 417 GLKNFEDMSGSSCVPTRTTYTVVIDGLCKA-QMLPDACK 454


>gi|297806463|ref|XP_002871115.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316952|gb|EFH47374.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 942

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/508 (26%), Positives = 235/508 (46%), Gaps = 73/508 (14%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT------------ 118
           T R  T L+++       +EA +    + E G + SLVTY+ ++   +            
Sbjct: 344 TSRIYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWF 403

Query: 119 -----IQKRFN-SIH-----------------SIMSQVEENGMDPDSIFFNAVINAFSES 155
                I K  N SI+                 +++ ++EE G+D     ++ +++ ++  
Sbjct: 404 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMV 463

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
            + ++ +  F ++KE G TPT  TY  LI  Y   GK  +++++  +M  EG VK NL+T
Sbjct: 464 ADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG-VKHNLKT 522

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           Y++++  +   K+   A+ V   M   GMKPDV+ YN I  A+   G  D+A + + EM+
Sbjct: 523 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQ 582

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
               +P  RT   II+G+ K G ++ +L     M+  G  P +  FN LI G VE    +
Sbjct: 583 KLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQME 642

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD-------- 387
              E+L  M    V+ +  TY+ IM  +++ G   K  E F  +   G++ D        
Sbjct: 643 KAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALL 702

Query: 388 ---------------------------AHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
                                      +  Y+IL  G+ R  +  +A +L+  M + G  
Sbjct: 703 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 762

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P++  +T+ IS     G M+RA +  ++M   GV PN+KT+ TL+ G++ A  P +A   
Sbjct: 763 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSC 822

Query: 481 LQIMKAFGVHPQKSTF--LLLAEARRAT 506
            + MKA G+ P K+ +  LL +   RA+
Sbjct: 823 YEEMKAVGLKPDKAVYHCLLTSLLSRAS 850



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 200/396 (50%), Gaps = 7/396 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+N   + GK  +A  +   + E G K +L TY+ ++      K + +  ++ 
Sbjct: 484 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 543

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + + GM PD I +N +I AF   GNM+ A+ T  +M++    PTT T+  +I G+  +
Sbjct: 544 EDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKS 603

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    S+++ D+M R G V P + T+N L+     ++ + +A  ++ +M  +G+  +  T
Sbjct: 604 GDMRRSLEVFDMMRRCGCV-PTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHT 662

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  I   YA  G+  +A E    +++ G++ +  T   ++   CK G+++ AL   + M 
Sbjct: 663 YTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMS 722

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              +  N  ++N+LI G+    D     +++  MK+  V PD+ TY++ ++A S AG M+
Sbjct: 723 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 782

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  +  ++M   G+KP+   Y+ L KG+ R   PEKA      M   G  P+  ++  ++
Sbjct: 783 RATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAVGLKPDKAVYHCLL 842

Query: 431 SGWCSDGSMDRA------IEVFDKMCEHGVSPNLKT 460
           +   S  S+  A      + +  +M E G+  ++ T
Sbjct: 843 TSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGT 878



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 110/421 (26%), Positives = 195/421 (46%), Gaps = 2/421 (0%)

Query: 92  QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINA 151
           QA+ +   E  +KPS   +  ++     +   +       ++   G+ P S  + ++I+A
Sbjct: 296 QAVISAF-EKINKPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHA 354

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP 211
           ++   +MEEA+    KMKE G+  +  TY+ ++ G+  AG  E +    D   R      
Sbjct: 355 YAVGRDMEEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKT-L 413

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           N   Y  ++ A C   N+  A  ++ +M   G+   +  Y+T+   Y    +  +   V 
Sbjct: 414 NASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVF 473

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
             ++  G  P   T G +I+ Y K GKI +AL  +R MKE GV  NL  ++++I GFV++
Sbjct: 474 KRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKL 533

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
            D      V   M +  + PDVI Y+ I+ A+   G MD+  +   +M K   +P    +
Sbjct: 534 KDWANAFAVFEDMVKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTF 593

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
             +  G+ +  +  ++ E+   M   G  P V  F  +I+G      M++A+E+ D+M  
Sbjct: 594 MPIINGFAKSGDMRRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTL 653

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            GVS N  T+  +M GY+      +A E    ++  G+     T+  L +A   +G  + 
Sbjct: 654 AGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLEVDIFTYEALLKACCKSGRMQS 713

Query: 512 A 512
           A
Sbjct: 714 A 714



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 199/447 (44%), Gaps = 36/447 (8%)

Query: 85  RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
           RG    A+  F  +   G  P+   YT+L+ A  + +      S + +++E G++   + 
Sbjct: 323 RGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVT 382

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           ++ ++  FS++GN E A   F + K    T   S Y  +I  +      E +  L+  M 
Sbjct: 383 YSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME 442

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
            EG   P +  Y+ ++  +    +  +   V  ++   G  P VVTY  +   Y + G+ 
Sbjct: 443 EEGIDAP-IAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVVTYGCLINLYTKVGKI 501

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A EV   M+  GV+ N +T  ++I+G+ K      A      M + G+ P+++++N +
Sbjct: 502 SKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 561

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I  F  + + D   + +  M++ R  P   T+  I+N ++ +G M +  E+FD M + G 
Sbjct: 562 IAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDMRRSLEVFDMMRRCGC 621

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P  H ++ L  G V +++ EKA E+L  M  +G   N   +T I+ G+ S G   +A E
Sbjct: 622 VPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFE 681

Query: 445 VFDKMCEHGVSPNLKTFETLMW-----------------------------------GYS 469
            F ++   G+  ++ T+E L+                                    G++
Sbjct: 682 YFTRLQNEGLEVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWA 741

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTF 496
                W A +++Q MK  GV P   T+
Sbjct: 742 RRGDVWEAADLIQQMKKEGVKPDIHTY 768



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/383 (25%), Positives = 176/383 (45%), Gaps = 36/383 (9%)

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P+ + +  ++K YG  G    + +  + M   G + P  R Y  L+ A+   +++ EA +
Sbjct: 308 PSRTEFGLMVKFYGRRGDMHRARETFERMRARG-ITPTSRIYTSLIHAYAVGRDMEEALS 366

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
            + KM   G++  +VTY+ I   +++ G A+ A+    E +      N    G II  +C
Sbjct: 367 CVRKMKEEGIEMSLVTYSVIVGGFSKAGNAEAADHWFDEAKRIHKTLNASIYGKIIYAHC 426

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           +   ++ A    R M+E G+   + I++ ++ G+  + D      V   +KE    P V+
Sbjct: 427 QTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLIVFKRLKECGFTPTVV 486

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           TY  ++N ++  G + K  E+   M + G+K +   YS++  G+V+ ++   A  +   M
Sbjct: 487 TYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFEDM 546

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAI------------------------------- 443
           ++ G  P+V+++  II+ +C  G+MDRAI                               
Sbjct: 547 VKEGMKPDVILYNNIIAAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIINGFAKSGDM 606

Query: 444 ----EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
               EVFD M   G  P + TF  L+ G  E RQ  +A EIL  M   GV   + T+  +
Sbjct: 607 RRSLEVFDMMRRCGCVPTVHTFNALINGLVEKRQMEKAVEILDEMTLAGVSANEHTYTKI 666

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
            +   + G T +A    ++++N+
Sbjct: 667 MQGYASVGDTGKAFEYFTRLQNE 689


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/465 (26%), Positives = 220/465 (47%), Gaps = 28/465 (6%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   L+       K   A + F  L + G  P+LVT+ TLL  L ++ R +    +  
Sbjct: 15  IYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFH 74

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ +    P+ + F  ++N     G + EA+    +M E GL P   TY T++ G    G
Sbjct: 75  QMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMG 130

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++ LL  M    ++KP++  Y+ ++     +   T+A N+  +M   G+ PD+VTY
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +   +  +G+  +A+ ++ EM    + P+  T   +I+   KEG +  A    + M  
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR--------------VNPDVITYS 357
            GV PN+V  N L+ G     D   + + L + K  +              V PDV TY+
Sbjct: 251 SGVCPNVVTCNTLLDGLC---DSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYN 307

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++     G   + +E++++M   GI PD   YS +  G  ++   ++A ++  +M   
Sbjct: 308 ILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSK 367

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
            F PN+V F T+I+G+C  G +D  +E+F +M   G+  N  T+ TL+ G+ +      +
Sbjct: 368 SFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGS 427

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGL--TKEAKRILSKIK 520
            +I Q M + GV+P   T          TGL   +E KR L+ ++
Sbjct: 428 LDIFQEMISSGVYPDTITI-----RNMLTGLWSKEELKRALAMLE 467



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 192/412 (46%), Gaps = 45/412 (10%)

Query: 140 PDSIF-FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI--------- 189
           P  I+ FN +I  F     +  A+ TF K+ + G  PT  T+NTL+ G  +         
Sbjct: 12  PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 190 ----------------------AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
                                  G+  E+V LLD M  +G ++PN  TY  +V   C   
Sbjct: 72  LFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDG-LQPNQITYGTIVDGMCKMG 130

Query: 228 NITEAWNVMHKM-AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           +   A N++ KM   S +KPDVV Y+ I     ++G    A+ + +EM+  G+ P+  T 
Sbjct: 131 DTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTY 190

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             +I+G+C  GK  EA R  + M    + P++V F+ LI   V+  D +   ++L  M  
Sbjct: 191 SCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMIS 250

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA-----------GIKPDAHAYSILA 395
             V P+V+T +T+++    +G +    E+F  M K+           G++PD   Y+IL 
Sbjct: 251 SGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILI 310

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G + E +  +AEEL   M   G  P+ V ++++I+G C    +D A ++FD M     S
Sbjct: 311 SGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFS 370

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           PN+ TF TL+ GY +A       E+   M   G+     T++ L    R  G
Sbjct: 371 PNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVG 422



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 105/391 (26%), Positives = 210/391 (53%), Gaps = 15/391 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T LMN L   G+  EA A+ + ++E G +P+ +TY T++  +       S  +++ 
Sbjct: 81  VVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLR 140

Query: 132 QVEE-NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           ++EE + + PD + ++A+I+   + G   +A + F +M++ G+ P   TY+ +I G+  +
Sbjct: 141 KMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSS 200

Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           GK  E+ +LL +++ R+  + P++ T++ L+ A   E ++  A +++ +M +SG+ P+VV
Sbjct: 201 GKWSEAQRLLQEMLVRK--ISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVV 258

Query: 250 TYNTIATAYAQNGEADQAEEVIVEME-----------HNGVQPNGRTCGIIISGYCKEGK 298
           T NT+      +G+   A E+   M+            NGV+P+ +T  I+ISG   EGK
Sbjct: 259 TCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGK 318

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
             EA      M   G+ P+ V ++ +I G  +    D   ++   M     +P+++T++T
Sbjct: 319 FLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNT 378

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++  +  AG +D   E+F +MG+ GI  +A  Y  L +G+ +      + ++   MI SG
Sbjct: 379 LITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSG 438

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            +P+ +    +++G  S   + RA+ + +++
Sbjct: 439 VYPDTITIRNMLTGLWSKEELKRALAMLEEL 469



 Score = 96.3 bits (238), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/226 (26%), Positives = 110/226 (48%), Gaps = 16/226 (7%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNL------IEGGH-----KPSLVTYTTLLAAL 117
           C  V +   L++ L + GK ++A  +F  +      I+  H     +P + TY  L++ L
Sbjct: 254 CPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGL 313

Query: 118 TIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT 177
             + +F     +  ++   G+ PD++ ++++IN   +   ++EA   F  M     +P  
Sbjct: 314 INEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNI 373

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
            T+NTLI GY  AG  ++ ++L   M R G V  N  TY  L+R +    NI  + ++  
Sbjct: 374 VTFNTLITGYCKAGMVDDGLELFCEMGRRGIV-ANAITYITLIRGFRKVGNINGSLDIFQ 432

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQA----EEVIVEMEHNGV 279
           +M +SG+ PD +T   + T      E  +A    EE+ + M+H+ V
Sbjct: 433 EMISSGVYPDTITIRNMLTGLWSKEELKRALAMLEELQMSMDHHLV 478


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/390 (26%), Positives = 192/390 (49%), Gaps = 1/390 (0%)

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           V E  ++PD+  +N +I      G    A+    +M      P   TY  L++       
Sbjct: 23  VAEMPVEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSG 82

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            ++++KLLD M R+    P++ TYNV+V   C E  + +A   +  + + G +P+ V+YN
Sbjct: 83  YKQAMKLLDEM-RDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYN 141

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +          + AEE++ EM   G  PN  T  ++IS  C++G ++ AL     + +Y
Sbjct: 142 IVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKY 201

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G  PN + +N L+  F +    D     L LM      PD+++Y+T++ A   +G +D  
Sbjct: 202 GCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVA 261

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            E+   +   G  P   +Y+ +  G  +  + ++A ELL  M+  G  P+++ ++TI +G
Sbjct: 262 VELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAG 321

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C +  ++ AI  F K+ + G+ PN   +  ++ G  + R+   A ++   M   G  P 
Sbjct: 322 LCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPN 381

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +ST+ +L E     GL KEA+ +L ++ ++
Sbjct: 382 ESTYTILIEGLAYEGLIKEARDLLDELCSR 411



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 184/366 (50%), Gaps = 1/366 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           +P   TY TL+  L  + R  +  +++ ++      PD + +  ++ A  +    ++AM 
Sbjct: 29  EPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMK 88

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              +M++ G TP   TYN ++ G    G+ +++++ L  +   G  +PN  +YN++++  
Sbjct: 89  LLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYG-CEPNTVSYNIVLKGL 147

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C  +   +A  +M +M   G  P+VVT+N + +   + G  + A EV+ ++   G  PN 
Sbjct: 148 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 207

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            +   ++  +CK+ K+ +A+ F   M   G +P++V +N L+       + D   E+L  
Sbjct: 208 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 267

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           +K+    P +I+Y+T+++  + AG   +  E+ ++M   G++PD   YS +A G  RE  
Sbjct: 268 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 327

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            E A      + + G  PN V++  II G C       AI++F  M  +G  PN  T+  
Sbjct: 328 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 387

Query: 464 LMWGYS 469
           L+ G +
Sbjct: 388 LIEGLA 393



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 181/342 (52%), Gaps = 4/342 (1%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           YN ++ GY  AG+ + + +L+  M     V+P+  TYN L+R  C       A  V+ +M
Sbjct: 3   YNAMVAGYCGAGQLDAARRLVAEMP----VEPDAYTYNTLIRGLCGRGRTANALAVLDEM 58

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
                 PDVVTY  +  A  +     QA +++ EM   G  P+  T  ++++G C+EG++
Sbjct: 59  LRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRV 118

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            +A+ F + +  YG  PN V +N+++KG       +  +E++  M +    P+V+T++ +
Sbjct: 119 DDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNML 178

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++     G ++   E+ + + K G  P++ +Y+ L   + ++++ +KA   L  M+  G 
Sbjct: 179 ISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGC 238

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
           +P++V + T+++  C  G +D A+E+  ++ + G +P L ++ T++ G ++A +   A E
Sbjct: 239 YPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALE 298

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           +L  M + G+ P   T+  +A         ++A R   K+++
Sbjct: 299 LLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQD 340



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 183/376 (48%), Gaps = 1/376 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L  RG+   A A+ + ++     P +VTYT LL A   +  +     ++ ++ + G
Sbjct: 38  LIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKG 97

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + +N V+N   + G +++A++    +   G  P T +YN ++KG   A + E++ 
Sbjct: 98  CTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAE 157

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+  M ++G   PN+ T+N+L+   C +  +  A  V+ ++   G  P+ ++YN +  A
Sbjct: 158 ELMGEMGQKG-CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHA 216

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + +  + D+A   +  M   G  P+  +   +++  C+ G++  A+     +K+ G  P 
Sbjct: 217 FCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPV 276

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           L+ +N +I G  +        E+L  M    + PD+ITYSTI         ++     F 
Sbjct: 277 LISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFG 336

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +   GI+P+   Y+ +  G  + +E   A +L   MI +G  PN   +T +I G   +G
Sbjct: 337 KVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEG 396

Query: 438 SMDRAIEVFDKMCEHG 453
            +  A ++ D++C   
Sbjct: 397 LIKEARDLLDELCSRA 412



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 70/240 (29%), Positives = 122/240 (50%), Gaps = 2/240 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C   V +   L++ L  +G  + A  +   + + G  P+ ++Y  LL A   QK+
Sbjct: 163 MGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKK 222

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +   + +  +   G  PD + +N ++ A   SG ++ A++   ++K+ G  P   +YNT
Sbjct: 223 MDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNT 282

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G   AGK +E+++LL+ M  +G ++P++ TY+ +    C E  I +A     K+   
Sbjct: 283 VIDGLTKAGKTKEALELLNEMVSKG-LQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDM 341

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G++P+ V YN I     +  E   A ++   M  NG  PN  T  I+I G   EG IKEA
Sbjct: 342 GIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEA 401



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 42/135 (31%), Positives = 71/135 (52%), Gaps = 1/135 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   +++ L + GK +EA  + N ++  G +P ++TY+T+ A L  + R         +V
Sbjct: 279 SYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKV 338

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++ G+ P+++ +NA+I    +      A+D F  M  +G  P  STY  LI+G    G  
Sbjct: 339 QDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLI 398

Query: 194 EESVKLLD-LMSREG 207
           +E+  LLD L SR G
Sbjct: 399 KEARDLLDELCSRAG 413



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 42/187 (22%), Positives = 88/187 (47%), Gaps = 1/187 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   L+ +L   G+   A  + + L + G  P L++Y T++  LT   +      +++
Sbjct: 242 IVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLN 301

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD I ++ +         +E+A+  F K+++ G+ P T  YN +I G     
Sbjct: 302 EMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRR 361

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +   ++ L   M   G + PN  TY +L+     E  I EA +++ ++ +   +  ++  
Sbjct: 362 ETHSAIDLFAYMIGNGCM-PNESTYTILIEGLAYEGLIKEARDLLDELCSRAGEEILLDV 420

Query: 252 NTIATAY 258
           + I  A+
Sbjct: 421 HLIDVAF 427


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 213/454 (46%), Gaps = 6/454 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   ++G  + A  +F  L   G  P++ TY  ++     + +F  +  ++ ++ E G
Sbjct: 213 LIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERG 272

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +D     +N +I+A  + G   EA DT   M +SG  P  +TYN LI G    G+  ++ 
Sbjct: 273 LDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAE 332

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL+   + G + PN  +Y  L+  +C +     A +++ KM+  G KPD+VTY  +   
Sbjct: 333 QLLEQAIKRG-LLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHG 391

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               GE D A  V  +M   GV P+     +++SG CK+G++  A      M +  V P+
Sbjct: 392 LIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPD 451

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             I   L+ GF+   D +   ++  L  E  ++P V+ Y+ ++  +   G M      F 
Sbjct: 452 AFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFK 511

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M +    PD   YS +  GY++  +   A  +   M++    PNVV +T +I+G+C  G
Sbjct: 512 RMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSG 571

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++RA + F +M    + PN+ T+  L+  + +     +A    + M      P   T+ 
Sbjct: 572 DINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYN 631

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNEMEAE 531
            L       GLT     ++S  ++++  N +  E
Sbjct: 632 YL-----MNGLTNNVDFVISNQRSEQTENSLVLE 660



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 208/448 (46%), Gaps = 1/448 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L+N L++ GK + A  +++ +++   +    T   ++  L  + +      ++ 
Sbjct: 137 VFSCNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIE 196

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +    G  P+ +F+N +I+ + + G+ E A   F ++K  G  PT  TY  +I G+   G
Sbjct: 197 KRWGRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKG 256

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K E   KLL  MS  G +  ++  YN ++ A        EA + +  M  SG  PD+ TY
Sbjct: 257 KFEVVDKLLVEMSERG-LDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATY 315

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N + T     GE  +AE+++ +    G+ PN  +   +I  YCK+G+   AL     M E
Sbjct: 316 NILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSE 375

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P+LV +  LI G +   + D    V   M E  V PD   Y+ +M+     G +  
Sbjct: 376 RGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPA 435

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            K +  +M    + PDA   + L  G++R  + E+A++L    IE G  P VV +  +I 
Sbjct: 436 AKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIK 495

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C  G M  A+  F +M +   SP+  T+ T++ GY +      A  +  +M      P
Sbjct: 496 GYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKP 555

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
              T+ LL      +G    A++   ++
Sbjct: 556 NVVTYTLLINGFCLSGDINRAEKTFKQM 583



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 174/363 (47%), Gaps = 3/363 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++     ++++  + G   EA      +I+ G  P + TY  L+         +    ++
Sbjct: 276 SIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLL 335

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            Q  + G+ P+ + +  +I+ + + G    A+D   KM E G  P   TY  LI G  +A
Sbjct: 336 EQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVA 395

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ + ++ + + M  +G V P+   YNVL+   C +  +  A  ++ +M    + PD   
Sbjct: 396 GEVDVALTVRNKMVEKG-VLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFI 454

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
             T+   + ++G+ ++A+++       G+ P       +I GYCK G +K+AL   + M 
Sbjct: 455 TATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMI 514

Query: 311 EYGVH-PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           + G+H P+   ++ +I G++++ D  G   +  LM +    P+V+TY+ ++N +  +G +
Sbjct: 515 Q-GLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDI 573

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           ++ ++ F  M    +KP+   Y+IL   + +     KA      M+     PN V +  +
Sbjct: 574 NRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYL 633

Query: 430 ISG 432
           ++G
Sbjct: 634 MNG 636



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 103/404 (25%), Positives = 179/404 (44%), Gaps = 43/404 (10%)

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD---TFWKMKESGLTPTTST 179
           F+ + S++  ++   + P    F+ VI+ F++ G ++ A++   TF K+      P   +
Sbjct: 82  FSEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHC--VPDVFS 139

Query: 180 YNTLIKGYGIAGKPEESVKLLD-LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
            N+L+      GK E + K+ D ++ R G V     T  ++V+  C E  + + W ++ K
Sbjct: 140 CNSLLNVLVKHGKVEIACKVYDEMVDRNGEVDN--YTVCIMVKGLCKEGKVEDGWKLIEK 197

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
               G  P++V YNT+                                   I GYCK+G 
Sbjct: 198 RWGRGCMPNIVFYNTL-----------------------------------IDGYCKKGD 222

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
            + A    + +K  G  P +  +  +I GF +    + VD++L  M E  ++  +  Y+ 
Sbjct: 223 TERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNN 282

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           I++A    G   +  +    M K+G  PD   Y+IL  G     E  KAE+LL   I+ G
Sbjct: 283 IIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRG 342

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PN V +T +I  +C  G   RA+++  KM E G  P+L T+  L+ G   A +   A 
Sbjct: 343 LLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVAL 402

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            +   M   GV P  + + +L       G    AK +L+++ ++
Sbjct: 403 TVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQ 446



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 89/376 (23%), Positives = 166/376 (44%), Gaps = 13/376 (3%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T L+++  ++G+   A  +   + E GHKP LVTY  L+  L +    +   ++ +++
Sbjct: 349 SYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKM 408

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E G+ PD+  +N +++   + G +  A     +M +  + P      TL+ G+   G  
Sbjct: 409 VEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDF 468

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           EE+ KL +L   +G + P +  YN +++ +C    + +A     +M      PD  TY+T
Sbjct: 469 EEAKKLFELTIEKG-IDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYST 527

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           I   Y +  +   A  +   M     +PN  T  ++I+G+C  G I  A +  + M    
Sbjct: 528 IIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLR 587

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST-AGFM--- 369
           + PN+V + +LI  F + ++          M   +  P+ +TY+ +MN  +    F+   
Sbjct: 588 LKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISN 647

Query: 370 --------DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                       E F  M   G    A +Y+ +     + +  + A  L   M+  GF P
Sbjct: 648 QRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLP 707

Query: 422 NVVIFTTIISGWCSDG 437
           + V    ++ G C +G
Sbjct: 708 DPVSLVALLHGLCLEG 723



 Score = 70.1 bits (170), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 58/279 (20%), Positives = 104/279 (37%), Gaps = 70/279 (25%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL-----------AALTIQKRFNSI 126
           L++  I  G  +EA+ +F   IE G  P +V Y  ++           A L  ++    +
Sbjct: 458 LVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGL 517

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
           HS           PD   ++ +I+ + +  ++  A+  F  M +    P   TY  LI G
Sbjct: 518 HS-----------PDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLING 566

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
           + ++G    + K    M     +KPN+ TY +L+  +C   N+T+A +   +M      P
Sbjct: 567 FCLSGDINRAEKTFKQM-LSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQMLMEKCLP 625

Query: 247 DVVTYNTIATAYAQNGE-------ADQAEEVIV--------------------------- 272
           + VTYN +      N +       ++Q E  +V                           
Sbjct: 626 NDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASYNSILICLC 685

Query: 273 -------------EMEHNGVQPNGRTCGIIISGYCKEGK 298
                        +M   G  P+  +   ++ G C EG+
Sbjct: 686 QHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGR 724



 Score = 42.4 bits (98), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 45/222 (20%), Positives = 88/222 (39%), Gaps = 16/222 (7%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K +C+  V + T L+N     G    A+  F  ++    KP++VTYT L+        
Sbjct: 548 MVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVN 607

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAF------------SESGNMEEAMDTFWKMKE 170
                S   Q+      P+ + +N ++N              SE       +++F  M  
Sbjct: 608 LTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMIS 667

Query: 171 SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
            G     ++YN+++         + ++ L D M  +G + P+  +   L+   C E   +
Sbjct: 668 DGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFL-PDPVSLVALLHGLCLEGR-S 725

Query: 231 EAWNVMHKMAASGMKPDV-VTYNTIATAYAQNGEADQAEEVI 271
           + WN +     +  +  V V Y+    A+   G+  +A  ++
Sbjct: 726 QDWNNVISCKLNERELQVAVKYSEKLDAFLSQGQTSEASLIL 767


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/503 (25%), Positives = 227/503 (45%), Gaps = 46/503 (9%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           + KL+N   + GK  E+      L+  G+ P ++  T L+      K       +M ++ 
Sbjct: 81  LMKLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EIL 139

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI------KGYG 188
           E+  +PD   +NAVI+ F +   +E A     +MK  G  P   TYN +I      +  G
Sbjct: 140 ESHTEPDVFAYNAVISGFCKVNQIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLG 199

Query: 189 IA-----------------------------GKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           +A                             G   E++KLL+ M   G + P++ TYN +
Sbjct: 200 LALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARG-LLPDMYTYNAI 258

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +R  C E  +  A  ++  + + G +PDV++YN +  A+   G+ D+ E+++ EM   G 
Sbjct: 259 IRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQGKWDEGEKLVAEMFSRGC 318

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           +PN  T  I+IS  C+ G+I EA+   + M E  + P+   ++ LI    +    D    
Sbjct: 319 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 378

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           ++  M      PD++ Y+TI+ A    G  ++  EIF+ +   G  P+  +Y+ +     
Sbjct: 379 IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALW 438

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
              +  +A  ++  MI  G  P+ + + ++IS  C DG ++ AI + D M + G  P + 
Sbjct: 439 SCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVI 498

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           ++  ++ G  + R+   A  +   M   G  P ++T++LL E     G   EA       
Sbjct: 499 SYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAGWRTEA------- 551

Query: 520 KNKERTNEMEAEEDIPVESLERL 542
              E  N + + + I  +S +RL
Sbjct: 552 --MELANSLFSRDVISQDSFKRL 572


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 206/413 (49%), Gaps = 4/413 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K +EA+ + NN ++ G  P++VT+T L+    + ++F+    + +++  +    D   F 
Sbjct: 372 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 431

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN+  +   ++EA +   ++  +GL P   TY ++I GY  +GK + ++++L +M R+
Sbjct: 432 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +PN  TYN L+     +K + +A  ++ KM   G+ P+V+TY T+        + D 
Sbjct: 492 G-CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 550

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  +   ME NG++P+     ++    CK G+ +EA  F   +   GV    V +  LI 
Sbjct: 551 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLID 607

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GF +  + D    ++  M +    PD  TYS +++A      +++   I D M   GIK 
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
              AY+IL    +RE + + A+ +   M  SG  P+   +T  I+ +C +G ++ A ++ 
Sbjct: 668 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
            KM   GV+P++ T+  L+ G        RA   L+ M      P   T+ LL
Sbjct: 728 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780



 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 235/489 (48%), Gaps = 35/489 (7%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C   VR+ T L++ L + G+  +A+ +F+ + + G  PS++TY  ++   +   R
Sbjct: 279 MKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGR 338

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            N    I   +E+NG  PD   +N +I    +    EEA +      + G TPT  T+  
Sbjct: 339 MNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTN 397

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY +A K ++++++ + M      K +L+ +  L+ +   +  + EA  ++++++A+
Sbjct: 398 LINGYCMAEKFDDALRMKNKMM-SSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISAN 456

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P+V+TY +I   Y ++G+ D A EV+  ME +G QPN  T   ++ G  K+ K+ +A
Sbjct: 457 GLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKA 516

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD-----VIT-- 355
           +     M++ G+ PN++ +  L++G  +  D D    +  +M++  + PD     V+T  
Sbjct: 517 MALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDA 576

Query: 356 -------------------------YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
                                    Y+T+++ +S AG  D    + + M   G  PD++ 
Sbjct: 577 LCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYT 636

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YS+L     +++   +A  +L  M   G    +  +T +I     +G  D A  ++++M 
Sbjct: 637 YSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT 696

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
             G  P+  T+   +  Y +  +   AE+++  M+  GV P   T+ +L +     G   
Sbjct: 697 SSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYID 756

Query: 511 EAKRILSKI 519
            A   L ++
Sbjct: 757 RAFSTLKRM 765



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 220/451 (48%), Gaps = 7/451 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R   S T L+  L +    ++A  +F  +   G  P++  +T L++ L    R      +
Sbjct: 251 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 310

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
              + +NG+ P  + +NA+I  +S+ G M +A+     M+++G  P   TYNTLI  YG+
Sbjct: 311 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI--YGL 368

Query: 190 AG-KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
              K EE+ +LL+   +EG   P + T+  L+  +C  +   +A  + +KM +S  K D+
Sbjct: 369 CDQKTEEAEELLNNAVKEG-FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 427

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
             +  +  +  +     +A+E++ E+  NG+ PN  T   II GYCK GK+  AL   + 
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M+  G  PN   +N L+ G V+         +L  M++  + P+VITY+T++        
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            D    +F+ M + G+KPD HAY++L     +     +AEE    ++  G     V +TT
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCK---AGRAEEAYSFIVRKGVALTKVYYTT 604

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G+   G+ D A  + ++M + G +P+  T+  L+    + ++   A  IL  M   G
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +      + +L +     G    AKR+ +++
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEM 695



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 216/454 (47%), Gaps = 56/454 (12%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C+    +   LM  L++  K  +A A+   + + G  P+++TYTTLL     +  
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F++   +   +E+NG+ PD   +  + +A  ++G  EEA   +  +   G+  T   Y T
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTT 604

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+  AG  + +  L++ M  EG   P+  TY+VL+ A C +K + EA  ++ +M+  
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEG-CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 663

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+K  +  Y  +     + G+ D A+ +  EM  +G +P+  T  + I+ YCKEG++++A
Sbjct: 664 GIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDA 723

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                              +L++K     M+R+GV             PDV+TY+ +++ 
Sbjct: 724 E------------------DLILK-----MEREGV------------APDVVTYNILIDG 748

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK-------GYVREQ---------EPEK 406
               G++D+       M  A  +P+   Y +L K        YVR           E + 
Sbjct: 749 CGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDI 808

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
             +LL  M++ G +P V  ++++I+G+C  G ++ A  + D MC  G+SPN   +  L+ 
Sbjct: 809 TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 868

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
              + +   +A   + IM   G  PQ  ++ LL 
Sbjct: 869 CCCDTKFFEKALSFVSIMSECGFQPQLESYRLLV 902



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 209/461 (45%), Gaps = 40/461 (8%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +++ L++ G  P  VTY T++ +   +    + H     + E G++P++   NA++  + 
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYC 229

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
            +G + +A   F  M   G      +Y  LI+G   A    +++ L  +M R+G   PN+
Sbjct: 230 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDG-CSPNV 288

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
           R +  L+   C    + +A  +   M  +G+ P V+TYN +   Y++ G  + A ++   
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV---- 329
           ME NG  P+  T   +I G C + K +EA        + G  P +V F  LI G+     
Sbjct: 349 MEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEK 407

Query: 330 ----------------------------EIMDRDGVDEVLALMKEFRVN---PDVITYST 358
                                        ++ +D + E   L+ E   N   P+VITY++
Sbjct: 408 FDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTS 467

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           I++ +  +G +D   E+   M + G +P+A  Y+ L  G V++++  KA  LL  M + G
Sbjct: 468 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG 527

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PNV+ +TT++ G C +   D A  +F+ M ++G+ P+   +  L     +A    RAE
Sbjct: 528 IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA---GRAE 584

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           E    +   GV   K  +  L +     G T  A  ++ ++
Sbjct: 585 EAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 625



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 177/393 (45%), Gaps = 35/393 (8%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +N  + + +     E     + ++ + GL P T TYNT+IK Y   G    + +   L+ 
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLL- 209

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
            EG ++P   T N LV  +C    + +A  +   M   G + +  +Y  +          
Sbjct: 210 LEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCV 269

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A  + + M+ +G  PN R    +ISG CK G++ +A      M + GV P+++ +N +
Sbjct: 270 RKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAM 329

Query: 325 IKGFV------------EIMDRDGV----------------------DEVLALMKEFRVN 350
           I G+             E+M+++G                       +E+L    +    
Sbjct: 330 IVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFT 389

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P V+T++ ++N +  A   D    + + M  +  K D   +  L    +++   ++A+EL
Sbjct: 390 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 449

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           L  +  +G  PNV+ +T+II G+C  G +D A+EV   M   G  PN  T+ +LM+G  +
Sbjct: 450 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 509

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
            ++  +A  +L  M+  G+ P   T+  L + +
Sbjct: 510 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQ 542



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 165/370 (44%), Gaps = 17/370 (4%)

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           SF + K    T    T L++   + G    A  +   +I+ G  P   TY+ LL AL  Q
Sbjct: 588 SFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQ 647

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
           KR N    I+ Q+   G+      +  +I+     G  + A   + +M  SG  P+ +TY
Sbjct: 648 KRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTY 707

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
              I  Y   G+ E++  L+  M REG V P++ TYN+L+    +   I  A++ + +M 
Sbjct: 708 TVFINSYCKEGRLEDAEDLILKMEREG-VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766

Query: 241 ASGMKPDVVTYNTIA-------TAYAQNG---------EADQAEEVIVEMEHNGVQPNGR 284
            +  +P+  TY  +         AY ++          E D   +++  M  +G+ P   
Sbjct: 767 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 826

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T   +I+G+CK G+++EA      M   G+ PN  I+ LLIK   +    +     +++M
Sbjct: 827 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 886

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            E    P + +Y  ++      G  +K K +F D+ + G   D  A+ IL  G ++    
Sbjct: 887 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYV 946

Query: 405 EKAEELLMTM 414
           +   ++L  M
Sbjct: 947 DICFQMLSIM 956



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 151/333 (45%), Gaps = 17/333 (5%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++L ++ +  EA  I + +   G K ++  YT L+  +  + + +    + +++  +G
Sbjct: 640 LLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSG 699

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P +  +   IN++ + G +E+A D   KM+  G+ P   TYN LI G G  G  + + 
Sbjct: 700 HKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 759

Query: 198 KLLDLMSREGNVKPNLRTYNVLVR-------AWCNEKNITEAWNV---------MHKMAA 241
             L  M    + +PN  TY +L++       A+    + +  WN+         + +M  
Sbjct: 760 STLKRMV-GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVK 818

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G+ P V TY+++   + + G  ++A  ++  M   G+ PN     ++I   C     ++
Sbjct: 819 HGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEK 878

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           AL F   M E G  P L  + LL+ G     D + V  +   + E   N D + +  + +
Sbjct: 879 ALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILND 938

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
               AG++D C ++   M K      +  Y+++
Sbjct: 939 GLLKAGYVDICFQMLSIMEKRYCCISSQTYALV 971



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 154/351 (43%), Gaps = 38/351 (10%)

Query: 203 MSREGNVKPNL--RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
           + R G+ +  L  + YN  +R+            V  ++   G+ PD VTYNT+  +Y +
Sbjct: 136 IRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCK 195

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
            G+   A      +   G++P   TC  ++ GYC+ G++++A      M   G   N   
Sbjct: 196 EGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYS 255

Query: 321 FNLLIKGFVE------------IMDRDGVDE--------VLALMKEFRVN---------- 350
           + +LI+G  +            +M RDG           +  L K  RV           
Sbjct: 256 YTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMP 315

Query: 351 -----PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
                P V+TY+ ++  +S  G M+   +I + M K G  PD   Y+ L  G   +Q+ E
Sbjct: 316 QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTE 374

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +AEELL   ++ GF P VV FT +I+G+C     D A+ + +KM       +L+ F  L+
Sbjct: 375 EAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 434

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
               +  +   A+E+L  + A G+ P   T+  + +    +G    A  +L
Sbjct: 435 NSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 485



 Score = 42.7 bits (99), Expect = 0.56,   Method: Compositional matrix adjust.
 Identities = 29/136 (21%), Positives = 55/136 (40%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV + + L+    + G+ +EA  + +++   G  P+   YT L+      K F    S +
Sbjct: 824 TVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFV 883

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S + E G  P    +  ++      G+ E+    F  + E G       +  L  G   A
Sbjct: 884 SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKA 943

Query: 191 GKPEESVKLLDLMSRE 206
           G  +   ++L +M + 
Sbjct: 944 GYVDICFQMLSIMEKR 959


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 220/475 (46%), Gaps = 35/475 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ S   +++ L    K  EA   FN++I+ G +P ++ +TTL+       +    H ++
Sbjct: 6   TIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLL 65

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNME------------------------------- 159
           +Q  +    PD   + +VI+ + ++G+++                               
Sbjct: 66  NQALKR-FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRI 124

Query: 160 -EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
            EA + F ++K +G +P    Y  +I G   AG+ E+ +K  + MS    V P   TY V
Sbjct: 125 DEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCV-PTRTTYTV 183

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           ++   C  + + +A  V  +M   G  PD +TY T+   +++  + D+A +++  M   G
Sbjct: 184 VIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKG 243

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
            +P   T G I+ G+CK   I EA      M+E G  P L IF  L+  ++     +   
Sbjct: 244 PEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAY 303

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           +VL  M      PDVI Y+++++   + G + + + +FD M + G  PDA  Y  + + +
Sbjct: 304 QVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNF 363

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +    E A E+L  M +SG  P+   + +++ G+     +D+A  V+D+M   G+ PN 
Sbjct: 364 SKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNA 423

Query: 459 KTFETLMWGYSEARQPWRAEEIL-QIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            TF  LM G  +  +  RA  +  ++++   V P   ++ +L +     G   EA
Sbjct: 424 VTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEA 478



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/425 (25%), Positives = 207/425 (48%), Gaps = 11/425 (2%)

Query: 64  MNKESCRTVRS-MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+  SC   R+  T +++ L +     +A  +F  +++ G  P  +TYTTL+   +   +
Sbjct: 169 MSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASK 228

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    ++  +   G +P ++ + ++++ F +   + EA +   +M+E G  P    + +
Sbjct: 229 MDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTS 288

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+  Y   G+ EE+ ++L  M+  G   P++  Y  L+    +   + EA +V   M   
Sbjct: 289 LLSYYLSKGRAEEAYQVLTEMTARG-CAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEK 347

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  PD +TY TI   +++ G  + A E++  M  +GV P+      ++ GY K  ++ +A
Sbjct: 348 GCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQA 407

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEF----RVNPDVITYS 357
                 M   G+ PN V FN+L+ G      +DG  D   +L KE      V P +++Y+
Sbjct: 408 FGVYDRMVASGIKPNAVTFNVLMHGLF----KDGKTDRAFSLFKEMLEKEEVPPTLVSYT 463

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++    AG + +    F +M   GI P+ H Y+ L     +     +A++L+  M++ 
Sbjct: 464 ILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKL 523

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G +P+V  ++ +I+G      +D A +VF +M + G +PN  T++ L  G+  A +    
Sbjct: 524 GVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGRALDL 583

Query: 478 EEILQ 482
           E + Q
Sbjct: 584 EAVKQ 588



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 116/472 (24%), Positives = 212/472 (44%), Gaps = 37/472 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++  L +  +  EA  +F  L   G  P++V YT ++  L    R         
Sbjct: 108 VISYTTVIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFE 167

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +   P    +  VI+   ++  + +A   F +M + G  P T TY TLI G+  A 
Sbjct: 168 EMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKAS 227

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E+ KLLD+M  +G  +P   TY  +V  +C    I EA  V+ +M   G +P +  +
Sbjct: 228 KMDEARKLLDVMLTKGP-EPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIF 286

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++ + Y   G A++A +V+ EM   G  P+      +I      G++ EA     +M E
Sbjct: 287 TSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIE 346

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P+ + +  +I+ F +I + +   E+L LM +  V PD   Y+++M+ +     +D+
Sbjct: 347 KGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQ 406

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL-------------------- 411
              ++D M  +GIKP+A  +++L  G  ++ + ++A  L                     
Sbjct: 407 AFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILI 466

Query: 412 ----------------MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
                             MI+ G  P    +T++I      G +  A ++ + M + GV+
Sbjct: 467 DGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVN 526

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           P+++ +  L+ G  ++     A ++ Q M   G  P + T+ +L    RA G
Sbjct: 527 PDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAG 578



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 173/387 (44%), Gaps = 34/387 (8%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G +P  + +N VI+  +    M+EA   F  M ++G  P    + TLI G+  AG+P+  
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVG 61

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWC-------------------------------- 224
            KLL+   +    +P++  Y  ++  +C                                
Sbjct: 62  HKLLNQALK--RFRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLA 119

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
           + K I EA  +  ++  +G  P+VV Y  +     + G  +   +   EM  +   P   
Sbjct: 120 DSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRT 179

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T  ++I G CK   + +A +    M + G  P+ + +  LI GF +    D   ++L +M
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
                 P  +TY +I++ +     +++ KE+   M + G +P    ++ L   Y+ +   
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 299

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           E+A ++L  M   G  P+V+++T++I    S G +  A  VFD M E G +P+  T+ T+
Sbjct: 300 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHP 491
           +  +S+      A EIL++M   GV P
Sbjct: 360 IQNFSKIGNVEAAGEILELMAKSGVGP 386


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 225/474 (47%), Gaps = 21/474 (4%)

Query: 67  ESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           E CR    + + L+  LI+  K  +A A+   + E G  P ++TYTTL+     +  F++
Sbjct: 491 EGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 550

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              +   +E+NG+ PD   +N + +A  +SG  EEA     K    G+  T  TY +L+ 
Sbjct: 551 AFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVK---KGVVLTKVTYTSLVD 607

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G+  AG  E +  L++ M  EG  K +  TY+VL++A C +K + EA +++ +M   G+K
Sbjct: 608 GFSKAGNTEFAAALIEKMVNEG-CKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVK 666

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
            ++V Y  I +   + G+ D A+ +  EM  +G +P+  T  + IS YCK G+I+EA   
Sbjct: 667 GNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHL 726

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW-- 363
              M+  GV P++V +N+ I G   +   D     L  M +    P+  TY  ++  +  
Sbjct: 727 IGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHFLK 786

Query: 364 ---------STAGF-----MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
                     T+G      +D   ++ + M K G+ P A  YS +  G+ +    E+A  
Sbjct: 787 MSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSSIIAGFCKATRLEEACV 846

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           LL  M+     PN  I+T +I   C     ++A      M E G  P+L+++  L+ G  
Sbjct: 847 LLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECGFQPHLESYHYLITGLC 906

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           +     +A+ +   +     +  +  + +L +     G      ++LS ++N+ 
Sbjct: 907 DEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICSQLLSAMENRH 960



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 220/482 (45%), Gaps = 46/482 (9%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           + SL+     +    +++ L++ G  P  VTY T++ A   +      H     + E+GM
Sbjct: 155 LRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGM 214

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           + D+   NA++  +  +G++ +A      M   G      +Y  LI+G        E++ 
Sbjct: 215 EMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALV 274

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           LL +M ++G   PNL TY +L+R  C E  I +A  ++ +M   G+ P V TYN +   Y
Sbjct: 275 LLLMMLQDG-CSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGY 333

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRT--------CG----------------------- 287
            ++G    A  +   ME NG  P+  T        CG                       
Sbjct: 334 CKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLCGGKPDEAEELLNGAIARGFSPTVI 393

Query: 288 ---IIISGYCKEGKIKEALRFARTMKEYGVHPNL----VIFNLLIKGFVEIMDRDGVDEV 340
               II+GYCK  KI +ALR    M       +L    V+ ++LIK       +D ++E+
Sbjct: 394 TFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEI 453

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
            A      ++P+V+ Y++I++A+   G +    E+F      G +P+A  YS L  G ++
Sbjct: 454 FA----NGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQ 509

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
           +Q+  KA  L+  M E G  P V+ +TT+I G C     D A  +F+ M ++G++P+ + 
Sbjct: 510 DQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQA 569

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  L     ++    RAEE    +   GV   K T+  L +     G T+ A  ++ K+ 
Sbjct: 570 YNVLTDALCKSG---RAEEAYSFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMV 626

Query: 521 NK 522
           N+
Sbjct: 627 NE 628



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/420 (26%), Positives = 198/420 (47%), Gaps = 5/420 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R   S T L+  L E    +EA  +   +++ G  P+L TYT L+  L  + R +    +
Sbjct: 251 RNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVL 310

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++   G+ P    +NA+I+ + +SG +++A+     M+ +G  P   TYN+LI G   
Sbjct: 311 LDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGL-C 369

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            GKP+E+ +LL+     G   P + T+  ++  +C  + I +A  V   M +S  K D+ 
Sbjct: 370 GGKPDEAEELLNGAIARG-FSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQ 428

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y  + +   +     +A++ + E+  NG+ PN      II  YCK GK+  AL   +  
Sbjct: 429 AYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLT 488

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +  G  PN   ++ LI G ++         ++  M+E  + P VITY+T++         
Sbjct: 489 EHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF 548

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D    +F+ M + G+ PD  AY++L     +    E+A   L   ++ G     V +T++
Sbjct: 549 DNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VKKGVVLTKVTYTSL 605

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+   G+ + A  + +KM   G   +  T+  L+    + ++   A  IL  M   GV
Sbjct: 606 VDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGV 665



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 164/370 (44%), Gaps = 17/370 (4%)

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           SF + K    T  + T L++   + G  + A A+   ++  G K    TY+ LL AL  Q
Sbjct: 588 SFLVKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQ 647

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
           K+ N   SI+ Q+   G+  + + +  +I+   + G  + A   F +M  SG  P+  TY
Sbjct: 648 KKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITY 707

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
              I  Y   G+ EE+  L+  M R G V P++ TYNV +    +   +  A++ + +M 
Sbjct: 708 TVFISSYCKIGRIEEAGHLIGEMERNG-VAPDVVTYNVFINGCGHMGYMDCAFSTLKRMI 766

Query: 241 ASGMKPDVVTY---------NTIATAYAQNGEA-------DQAEEVIVEMEHNGVQPNGR 284
            +  +P+  TY          ++A A+  +          D   +++  M  +G+ P   
Sbjct: 767 DASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAV 826

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T   II+G+CK  +++EA      M    + PN  I+ +LIK   +I   +     +  M
Sbjct: 827 TYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNM 886

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            E    P + +Y  ++      G  DK K +F D+ +     +  A+ IL  G ++    
Sbjct: 887 IECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHV 946

Query: 405 EKAEELLMTM 414
           +   +LL  M
Sbjct: 947 DICSQLLSAM 956



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 142/324 (43%), Gaps = 22/324 (6%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T +++ +I+ GK   A+++FN +I  GHKPS +TYT  +++     R      ++ 
Sbjct: 669 IVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIG 728

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++E NG+ PD + +N  IN     G M+ A  T  +M ++   P   TY  L+K +    
Sbjct: 729 EMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASCEPNYWTYWLLLKHF---- 784

Query: 192 KPEESVKLLDLMSREGNVKPNL-RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
                            +K +L   + V      N   +   W ++ +M   G+ P  VT
Sbjct: 785 -----------------LKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVT 827

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y++I   + +    ++A  ++  M    + PN     ++I   C     ++A  F   M 
Sbjct: 828 YSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMI 887

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G  P+L  ++ LI G  +  D D    +   + E   N + + +  + +    AG +D
Sbjct: 888 ECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVD 947

Query: 371 KCKEIFDDMGKAGIKPDAHAYSIL 394
            C ++   M     + D+  YS++
Sbjct: 948 ICSQLLSAMENRHCRIDSETYSMV 971



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/362 (22%), Positives = 150/362 (41%), Gaps = 36/362 (9%)

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNL--RTYNVLVRAWCNEKNITEAWNVMHKM 239
           ++I   G A    E+V  +  + R G  +  L  + YN+ +R+            +  ++
Sbjct: 115 SMISCSGTAEDMREAVDAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQL 174

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
              G+ PD VTYNT+  AY + G    A      +  +G++ +  TC  ++ GYC+ G +
Sbjct: 175 VQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDL 234

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
           ++A      M   G   N   + +LI+G  E         +L +M +   +P++ TY+ +
Sbjct: 235 RKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLL 294

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE------------------ 401
           +      G +   + + D+M + G+ P    Y+ +  GY +                   
Sbjct: 295 IRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGC 354

Query: 402 ----------------QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
                            +P++AEELL   I  GF P V+ FT II+G+C    +D A+ V
Sbjct: 355 NPDDWTYNSLIHGLCGGKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRV 414

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
              M       +L+ +  L+    +  +   A++ L  + A G+ P    +  + +A   
Sbjct: 415 KSIMISSKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCK 474

Query: 506 TG 507
            G
Sbjct: 475 VG 476



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/195 (25%), Positives = 91/195 (46%)

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           +NL ++  +     + + ++ + + +  + PD +TY+T++ A+   G +      F  + 
Sbjct: 151 YNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLR 210

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
           ++G++ D +  + L  GY R  +  KA  LLM M   G   N   +T +I G C    + 
Sbjct: 211 ESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVR 270

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            A+ +   M + G SPNL T+  L+ G  +  +   A  +L  M   GV P   T+  + 
Sbjct: 271 EALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAMI 330

Query: 501 EARRATGLTKEAKRI 515
           +    +G  K+A  I
Sbjct: 331 DGYCKSGRLKDALGI 345



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 44/212 (20%), Positives = 85/212 (40%), Gaps = 7/212 (3%)

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALM----KEFRVNPDVITYSTIMNAWSTAGFMD 370
           +  LV+  +   G  E M R+ VD + A+     K   ++P    Y+  + +       +
Sbjct: 109 YDKLVVSMISCSGTAEDM-REAVDAIQAIRRAGGKRLALSPKC--YNLALRSLLRFDMTE 165

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              +++  + + G+ PD   Y+ +   Y +E     A      + ESG   +      ++
Sbjct: 166 HMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALL 225

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+C  G + +A  +   M   G   N  ++  L+ G  E R    A  +L +M   G  
Sbjct: 226 LGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCS 285

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+ LL       G   +A+ +L ++  +
Sbjct: 286 PNLHTYTLLIRGLCKEGRIHDARVLLDEMPRR 317


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 206/413 (49%), Gaps = 4/413 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K +EA+ + NN ++ G  P++VT+T L+    + ++F+    + +++  +    D   F 
Sbjct: 372 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 431

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN+  +   ++EA +   ++  +GL P   TY ++I GY  +GK + ++++L +M R+
Sbjct: 432 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 491

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +PN  TYN L+     +K + +A  ++ KM   G+ P+V+TY T+        + D 
Sbjct: 492 G-CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 550

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  +   ME NG++P+     ++    CK G+ +EA  F   +   GV    V +  LI 
Sbjct: 551 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLID 607

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GF +  + D    ++  M +    PD  TYS +++A      +++   I D M   GIK 
Sbjct: 608 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 667

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
              AY+IL    +RE + + A+ +   M  SG  P+   +T  I+ +C +G ++ A ++ 
Sbjct: 668 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 727

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
            KM   GV+P++ T+  L+ G        RA   L+ M      P   T+ LL
Sbjct: 728 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 780



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 220/451 (48%), Gaps = 7/451 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R   S T L+  L E    +EA  +F  +   G  P++  +T L++ L    R      +
Sbjct: 251 RNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 310

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
              + +NG+ P  + +NA+I  +S+ G M +A+     M+++G  P   TYNTLI  YG+
Sbjct: 311 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI--YGL 368

Query: 190 AG-KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
              K EE+ +LL+   +EG   P + T+  L+  +C  +   +A  + +KM +S  K D+
Sbjct: 369 CDQKTEEAEELLNNAVKEG-FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 427

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
             +  +  +  +     +A+E++ E+  NG+ PN  T   II GYCK GK+  AL   + 
Sbjct: 428 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 487

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M+  G  PN   +N L+ G V+         +L  M++  + P+VITY+T++        
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            D    +F+ M + G+KPD HAY++L     +     +AEE    ++  G     V +TT
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCK---AGRAEEAYSFIVRKGVALTKVYYTT 604

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G+   G+ D A  + ++M + G +P+  T+  L+    + ++   A  IL  M   G
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 664

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +      + +L +     G    AKR+ +++
Sbjct: 665 IKCTIFAYTILIDEMLREGKHDHAKRMYNEM 695



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 235/489 (48%), Gaps = 35/489 (7%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C   VR+ T L++ L + G+  +A+ +F+ + + G  PS++TY  ++   +   R
Sbjct: 279 MKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGR 338

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            N    I   +E+NG  PD   +N +I    +    EEA +      + G TPT  T+  
Sbjct: 339 MNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTN 397

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY +A K ++++++ + M      K +L+ +  L+ +   +  + EA  ++++++A+
Sbjct: 398 LINGYCMAEKFDDALRMKNKMM-SSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISAN 456

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P+V+TY +I   Y ++G+ D A EV+  ME +G QPN  T   ++ G  K+ K+ +A
Sbjct: 457 GLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKA 516

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD-----VIT-- 355
           +     M++ G+ PN++ +  L++G  +  D D    +  +M++  + PD     V+T  
Sbjct: 517 MALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDA 576

Query: 356 -------------------------YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
                                    Y+T+++ +S AG  D    + + M   G  PD++ 
Sbjct: 577 LCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYT 636

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YS+L     +++   +A  +L  M   G    +  +T +I     +G  D A  ++++M 
Sbjct: 637 YSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT 696

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
             G  P+  T+   +  Y +  +   AE+++  M+  GV P   T+ +L +     G   
Sbjct: 697 SSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYID 756

Query: 511 EAKRILSKI 519
            A   L ++
Sbjct: 757 RAFSTLKRM 765



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 216/454 (47%), Gaps = 56/454 (12%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C+    +   LM  L++  K  +A A+   + + G  P+++TYTTLL     +  
Sbjct: 488 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 547

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F++   +   +E+NG+ PD   +  + +A  ++G  EEA   +  +   G+  T   Y T
Sbjct: 548 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTT 604

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+  AG  + +  L++ M  EG   P+  TY+VL+ A C +K + EA  ++ +M+  
Sbjct: 605 LIDGFSKAGNTDFAATLIERMIDEG-CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 663

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+K  +  Y  +     + G+ D A+ +  EM  +G +P+  T  + I+ YCKEG++++A
Sbjct: 664 GIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDA 723

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                              +L++K     M+R+GV             PDV+TY+ +++ 
Sbjct: 724 ------------------EDLILK-----MEREGV------------APDVVTYNILIDG 748

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK-------GYVREQ---------EPEK 406
               G++D+       M  A  +P+   Y +L K        YVR           E + 
Sbjct: 749 CGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDI 808

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
             +LL  M++ G +P V  ++++I+G+C  G ++ A  + D MC  G+SPN   +  L+ 
Sbjct: 809 TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 868

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
              + +   +A   + IM   G  PQ  ++ LL 
Sbjct: 869 CCCDTKFFEKALSFVSIMSECGFQPQLESYRLLV 902



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 117/461 (25%), Positives = 209/461 (45%), Gaps = 40/461 (8%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +++ L++ G  P  VTY T++ +   +    + H     + E G++P++   NA++  + 
Sbjct: 170 VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYC 229

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
            +G + +A   F  M   G      +Y  LI+G   A    E++ L  +M R+G   PN+
Sbjct: 230 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDG-CSPNV 288

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
           R +  L+   C    + +A  +   M  +G+ P V+TYN +   Y++ G  + A ++   
Sbjct: 289 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 348

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV---- 329
           ME NG  P+  T   +I G C + K +EA        + G  P +V F  LI G+     
Sbjct: 349 MEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEK 407

Query: 330 ----------------------------EIMDRDGVDEVLALMKEFRVN---PDVITYST 358
                                        ++ +D + E   L+ E   N   P+VITY++
Sbjct: 408 FDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTS 467

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           I++ +  +G +D   E+   M + G +P+A  Y+ L  G V++++  KA  LL  M + G
Sbjct: 468 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG 527

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PNV+ +TT++ G C +   D A  +F+ M ++G+ P+   +  L     +A    RAE
Sbjct: 528 IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA---GRAE 584

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           E    +   GV   K  +  L +     G T  A  ++ ++
Sbjct: 585 EAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 625



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 176/394 (44%), Gaps = 37/394 (9%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +N  + + +     E     + ++ + GL P T TYNT+IK Y   G    + +   L+ 
Sbjct: 151 YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRCFRLL- 209

Query: 205 REGNVKP-----------------------------------NLRTYNVLVRAWCNEKNI 229
            EG ++P                                   N  +Y +L++  C  K +
Sbjct: 210 LEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCV 269

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
            EA  +   M   G  P+V  +  + +   ++G    A  +   M  NGV P+  T   +
Sbjct: 270 REALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAM 329

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           I GY K G++ +AL+    M++ G HP+   +N LI G  +    +  +E+L    +   
Sbjct: 330 IVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNAVKEGF 388

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            P V+T++ ++N +  A   D    + + M  +  K D   +  L    +++   ++A+E
Sbjct: 389 TPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKE 448

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           LL  +  +G  PNV+ +T+II G+C  G +D A+EV   M   G  PN  T+ +LM+G  
Sbjct: 449 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           + ++  +A  +L  M+  G+ P   T+  L + +
Sbjct: 509 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQ 542



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 175/373 (46%), Gaps = 5/373 (1%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESG---LTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
           +++N    + +M  + D    ++ +G   L  +   YN  ++        E   ++   +
Sbjct: 115 SMLNCSDTAEDMRVSADAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQL 174

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            ++G + P+  TYN +++++C E ++T A      +   G++P+  T N +   Y + GE
Sbjct: 175 VQDG-LLPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGE 233

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
             +A  + + M   G Q N  +  I+I G C+   ++EAL     MK  G  PN+  F  
Sbjct: 234 LRKACWLFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTF 293

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           LI G  +         +   M +  V P V+TY+ ++  +S  G M+   +I + M K G
Sbjct: 294 LISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNG 353

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
             PD   Y+ L  G   +Q+ E+AEELL   ++ GF P VV FT +I+G+C     D A+
Sbjct: 354 CHPDDWTYNTLIYGLC-DQKTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDAL 412

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
            + +KM       +L+ F  L+    +  +   A+E+L  + A G+ P   T+  + +  
Sbjct: 413 RMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGY 472

Query: 504 RATGLTKEAKRIL 516
             +G    A  +L
Sbjct: 473 CKSGKVDIALEVL 485



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 165/370 (44%), Gaps = 17/370 (4%)

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           SF + K    T    T L++   + G    A  +   +I+ G  P   TY+ LL AL  Q
Sbjct: 588 SFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQ 647

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
           KR N    I+ Q+   G+      +  +I+     G  + A   + +M  SG  P+ +TY
Sbjct: 648 KRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTY 707

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
              I  Y   G+ E++  L+  M REG V P++ TYN+L+    +   I  A++ + +M 
Sbjct: 708 TVFINSYCKEGRLEDAEDLILKMEREG-VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 766

Query: 241 ASGMKPDVVTYNTIA-------TAYAQNG---------EADQAEEVIVEMEHNGVQPNGR 284
            +  +P+  TY  +         AY ++          E D   +++  M  +G+ P   
Sbjct: 767 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 826

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T   +I+G+CK G+++EA      M   G+ PN  I+ LLIK   +    +     +++M
Sbjct: 827 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 886

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            E    P + +Y  ++      G  +K K +F D+ + G   D  A+ IL  G ++    
Sbjct: 887 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYV 946

Query: 405 EKAEELLMTM 414
           +   ++L  M
Sbjct: 947 DICFQMLSIM 956



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 151/333 (45%), Gaps = 17/333 (5%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++L ++ +  EA  I + +   G K ++  YT L+  +  + + +    + +++  +G
Sbjct: 640 LLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSG 699

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P +  +   IN++ + G +E+A D   KM+  G+ P   TYN LI G G  G  + + 
Sbjct: 700 HKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 759

Query: 198 KLLDLMSREGNVKPNLRTYNVLVR-------AWCNEKNITEAWNV---------MHKMAA 241
             L  M    + +PN  TY +L++       A+    + +  WN+         + +M  
Sbjct: 760 STLKRMV-GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVK 818

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G+ P V TY+++   + + G  ++A  ++  M   G+ PN     ++I   C     ++
Sbjct: 819 HGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEK 878

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           AL F   M E G  P L  + LL+ G     D + V  +   + E   N D + +  + +
Sbjct: 879 ALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILND 938

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
               AG++D C ++   M K      +  Y+++
Sbjct: 939 GLLKAGYVDICFQMLSIMEKRYCCISSQTYALV 971



 Score = 42.7 bits (99), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 29/135 (21%), Positives = 55/135 (40%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV + + L+    + G+ +EA  + +++   G  P+   YT L+      K F    S +
Sbjct: 824 TVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFV 883

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S + E G  P    +  ++      G+ E+    F  + E G       +  L  G   A
Sbjct: 884 SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKA 943

Query: 191 GKPEESVKLLDLMSR 205
           G  +   ++L +M +
Sbjct: 944 GYVDICFQMLSIMEK 958


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 229/496 (46%), Gaps = 39/496 (7%)

Query: 63  CMNKES---CRTVRSMT---------KLMNSLIE----RGKPQEAQAIFNNLIEGGHKPS 106
           C+NKE    C+ + SM          ++ NSL+      G    A  +   +++ G +P 
Sbjct: 87  CLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPG 146

Query: 107 LVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV-INAFSES----GNMEEA 161
            V Y  L+  +   +        +++     M    +  N V I+ FS      G  E+A
Sbjct: 147 YVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKA 206

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
            +   +M   G  P TSTY+ +I     A K E++ +L   M R G + P++  Y  L+ 
Sbjct: 207 YNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNG-IAPDVYVYTTLID 265

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
           ++C    I +A N   +M   G  P+VVTY  +  AY ++ +  +A EV   M   G  P
Sbjct: 266 SFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTP 325

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH-----------------PNLVIFNLL 324
           N  T   +I G CK GKI++A +  + MK+  V                  PN+  +  L
Sbjct: 326 NIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGAL 385

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           + G  +        ++L  M      P+ + Y  +++    AG +D+ +E+F  M + G 
Sbjct: 386 VDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGY 445

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+ + YS L     +++  + A ++L  M+E+   PNVVI+T +I G C  G  D A +
Sbjct: 446 DPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYK 505

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           +   M E G +PN+ T+  ++ G+ ++ +  +  E+LQ M + G  P   T+ +L     
Sbjct: 506 LMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCC 565

Query: 505 ATGLTKEAKRILSKIK 520
           +TGL  EA ++L ++K
Sbjct: 566 STGLLDEAHKLLEEMK 581



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/554 (23%), Positives = 234/554 (42%), Gaps = 54/554 (9%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           TK+++ L E    +EA      +      P+++TY  LL     +++      I+S +  
Sbjct: 46  TKMISGLCEASLFEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMIT 105

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P    FN++++A+  SG+   A     KM + G  P    YN LI   GI    E 
Sbjct: 106 EGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIG--GICSSEEP 163

Query: 196 SVKLLDLMSR------EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
              +LDL  +      E  V  N    +   R  C      +A+NV+ +M + G  PD  
Sbjct: 164 GKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTS 223

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY+ +        + ++A ++  EM+ NG+ P+      +I  +CK G I++A  +   M
Sbjct: 224 TYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEM 283

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +  G  PN+V +  LI  +++       +EV  +M      P+++TY+ +++    AG +
Sbjct: 284 ERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKI 343

Query: 370 DKCKEIFDDMGKAGI-----------------KPDAHAYSILAKGYVREQEPEKAEELLM 412
           +K  +I+  M K  +                 +P+   Y  L  G  +  + ++A +LL 
Sbjct: 344 EKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLK 403

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
           +M   G  PN V++  +I G C  G +D A EVF  M E G  PN+ T+ +L+    + +
Sbjct: 404 SMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDK 463

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
           +   A ++L  M      P    +  + +     G T EA +++  ++ K          
Sbjct: 464 RLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEK---------- 513

Query: 533 DIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWF 592
                               PN++    ++  D  G +  ++K   LL+   S      F
Sbjct: 514 -----------------GCNPNVVTYTAMI--DGFGKSGRVEKCLELLQQMSSKGCAPNF 554

Query: 593 ATTSMYLSHSCKSG 606
            T  + ++H C +G
Sbjct: 555 VTYRVLINHCCSTG 568



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 180/376 (47%), Gaps = 16/376 (4%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + +K++  L    K ++A  +F  +   G  P +  YTTL+ +           +   ++
Sbjct: 224 TYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEM 283

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E +G  P+ + + A+I+A+ +S  + +A + +  M   G TP   TY  LI G   AGK 
Sbjct: 284 ERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKI 343

Query: 194 EESVKLLDLMSRE----------------GNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
           E++ ++  +M +E                 + +PN+ TY  LV   C    + EA +++ 
Sbjct: 344 EKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLK 403

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
            M+  G +P+ V Y+ +     + G+ D+A+EV   M   G  PN  T   +I    K+ 
Sbjct: 404 SMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDK 463

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
           ++  AL+    M E    PN+VI+  +I G  ++   D   +++ +M+E   NP+V+TY+
Sbjct: 464 RLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYT 523

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++ +  +G ++KC E+   M   G  P+   Y +L          ++A +LL  M ++
Sbjct: 524 AMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQT 583

Query: 418 GFHPNVVIFTTIISGW 433
            +  +V  +  +I G+
Sbjct: 584 YWPRHVAGYRKVIEGF 599



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 198/470 (42%), Gaps = 60/470 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V   T L++S  + G  ++A+  F+ +   G  P++VTYT L+ A    ++ +  + +  
Sbjct: 257 VYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYE 316

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT----------------- 174
            +   G  P+ + + A+I+   ++G +E+A   +  MK+  +                  
Sbjct: 317 MMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNE 376

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P   TY  L+ G   A + +E+  LL  MS EG  +PN   Y+ L+   C    + EA  
Sbjct: 377 PNVFTYGALVDGLCKAYQVKEARDLLKSMSVEG-CEPNHVVYDALIDGCCKAGKLDEAQE 435

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           V   M   G  P+V TY+++     ++   D A +V+ +M  N   PN      +I G C
Sbjct: 436 VFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLC 495

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           K GK  EA +    M+E G +PN+V +  +I GF +    +   E+L  M      P+ +
Sbjct: 496 KVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFV 555

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGK-------AGIK---------------------- 385
           TY  ++N   + G +D+  ++ ++M +       AG +                      
Sbjct: 556 TYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKVIEGFNREFIASLYLSFEISE 615

Query: 386 ----PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP----NVVIFTTIISGWCSDG 437
               P A  Y +L   +++    E A EL   +  S F P    N  I  T+I       
Sbjct: 616 NDSVPVAPVYRVLIDNFIKAGRLEIALELNEEL--SSFSPFSAANQNIHITLIENLSLAH 673

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
             D+A E++  M   G  P L     L+ G        R EE LQ++ + 
Sbjct: 674 KADKAFELYADMISRGSIPELSILVHLIKGLLRVN---RWEEALQLLDSI 720



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 177/397 (44%), Gaps = 21/397 (5%)

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +GK  E++ LL+   +E  V P+   Y  ++   C      EA + + +M AS   P+V+
Sbjct: 23  SGKWREALSLLE---KEEFV-PDTVLYTKMISGLCEASLFEEAMDFLTRMRASSCLPNVL 78

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +        +  + + ++  M   G  P+ R    ++  YC+ G    A +  + M
Sbjct: 79  TYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRSGDYAYAYKLLKKM 138

Query: 310 KEYGVHPNLVIFNLLIKGFV--EIMDRDGVD---EVLALMKEFRVNPDVITYSTIMNAWS 364
            + G  P  V++N+LI G    E   +D +D   +    M E  V  + +  S       
Sbjct: 139 VQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVLNKVNISNFSRCLC 198

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G  +K   +  +M   G  PD   YS +        + EKA +L   M  +G  P+V 
Sbjct: 199 GIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRNGIAPDVY 258

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           ++TT+I  +C  G +++A   FD+M   G +PN+ T+  L+  Y ++R+  +A E+ ++M
Sbjct: 259 VYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKANEVYEMM 318

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYH 544
            + G  P   T+  L +     G  ++A +I   +K          +E++ +  ++  + 
Sbjct: 319 LSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMK----------KENVEIPDVDMHFR 368

Query: 545 KEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLR 581
                ++ PN+     +V  D    A  +K+ R LL+
Sbjct: 369 VVDGASNEPNVFTYGALV--DGLCKAYQVKEARDLLK 403



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/231 (25%), Positives = 98/231 (42%), Gaps = 14/231 (6%)

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M   G + +  T G      CK GK +EAL      KE  V P+ V++  +I G  E   
Sbjct: 1   MSTMGYRMDEFTLGCFAHSLCKSGKWREALSLLE--KEEFV-PDTVLYTKMISGLCEASL 57

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            +   + L  M+     P+V+TY  ++        + +CK I   M   G  P    ++ 
Sbjct: 58  FEEAMDFLTRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNS 117

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD-----GSMDRAIEVFDK 448
           L   Y R  +   A +LL  M++ G  P  V++  +I G CS        +D A + + +
Sbjct: 118 LVHAYCRSGDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGE 177

Query: 449 MCEHGV---SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           M E GV     N+  F   + G  +  + +    +++ M + G  P  ST+
Sbjct: 178 MLEAGVVLNKVNISNFSRCLCGIGKFEKAYN---VIREMMSKGFIPDTSTY 225


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 215/450 (47%), Gaps = 1/450 (0%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R    L+N L++  K +  ++  ++++    +  + T+  L+ AL    +      +M +
Sbjct: 169 RFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEE 228

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +   G+ PD   F  ++  + E GN++ A+    +M E G   T  T N LI G+   G+
Sbjct: 229 MPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGR 288

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            ++++  +     EG  +P+  TYN LV   C   +   A  V+  M   G+ PD+ TYN
Sbjct: 289 IDQALSFIQEAVSEG-FRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYN 347

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++ +   + GE ++A +++ +M      PN  T   IIS  CKE ++ EA   AR +   
Sbjct: 348 SLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSK 407

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ P++  FN LI+G     +     ++   MK     PD  TY+ ++++  ++  +++ 
Sbjct: 408 GILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEA 467

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             +  +M   G   +   Y+ L  G+ + +  E+AEE+   M   G   + V + T+I G
Sbjct: 468 LNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDG 527

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C    ++ A ++ D+M   G+ P+  T+ +L+  + +     +A +I+Q M + G +P 
Sbjct: 528 LCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPD 587

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             T+  L       G  + A R+L  I+ K
Sbjct: 588 IVTYATLISGLCKAGRVQVASRLLRSIQMK 617



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/413 (27%), Positives = 203/413 (49%), Gaps = 1/413 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           KP    Y  LL  L    +   + S  S +    +  D   FN +I A  ++  +  A+ 
Sbjct: 165 KPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAIL 224

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              +M   GL+P  +T+ T+++GY   G  + ++++ + M   G    ++ T NVL+  +
Sbjct: 225 MMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDV-TVNVLINGF 283

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C +  I +A + + +  + G +PD  TYNT+     + G A  A EV+  M   G+ P+ 
Sbjct: 284 CKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDI 343

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T   +ISG CK G+I+EA++    M      PN V +N +I    +    D   E+  L
Sbjct: 344 YTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARL 403

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           +    + PDV T+++++     +       ++F++M   G +PD   Y++L       ++
Sbjct: 404 LTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRK 463

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            E+A  LL  M  +G   NVVI+ T+I G+C +  ++ A E+FD+M   GVS +  T+ T
Sbjct: 464 LEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNT 523

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           L+ G  ++++   A +++  M   G+ P K T+  L      TG  K+A  I+
Sbjct: 524 LIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIV 576



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 215/454 (47%), Gaps = 7/454 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+ +L +  + + A  +   +   G  P   T+TT++         +    I  
Sbjct: 203 VSTFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKE 262

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ E G     +  N +IN F + G +++A+    +    G  P   TYNTL+ G    G
Sbjct: 263 QMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIG 322

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + +++++D M   G + P++ TYN L+   C    I EA  ++ +M +    P+ VTY
Sbjct: 323 HAKHAMEVVDAMLL-GGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTY 381

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N I ++  +    D+A E+   +   G+ P+  T   +I G C     K A+     MK 
Sbjct: 382 NAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKG 441

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGF 368
            G  P+   +N+LI     +     ++E L L+KE  +N    +V+ Y+T+++ +     
Sbjct: 442 KGCRPDEFTYNMLIDS---LCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKR 498

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +++ +EIFD+M   G+  D+  Y+ L  G  + +  E A +L+  MI  G  P+   + +
Sbjct: 499 IEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNS 558

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +++ +C  G + +A ++   M   G +P++ T+ TL+ G  +A +   A  +L+ ++  G
Sbjct: 559 LLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKG 618

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +      +  + +A      T EA R+  ++ +K
Sbjct: 619 MVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDK 652



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 96/391 (24%), Positives = 193/391 (49%), Gaps = 2/391 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L + G  + A  + + ++ GG  P + TY +L++ L           I+ Q+    
Sbjct: 314 LVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD 373

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+++ +NA+I++  +   ++EA +    +   G+ P   T+N+LI+G  ++   + ++
Sbjct: 374 CSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAM 433

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L + M  +G  +P+  TYN+L+ + C+ + + EA N++ +M  +G   +VV YNT+   
Sbjct: 434 DLFEEMKGKG-CRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNGCARNVVIYNTLIDG 492

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + +N   ++AEE+  EME  GV  +  T   +I G CK  ++++A +    M   G+ P+
Sbjct: 493 FCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPD 552

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +N L+  F +  D     +++  M     NPD++TY+T+++    AG +     +  
Sbjct: 553 KFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCKAGRVQVASRLLR 612

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +   G+    HAY+ + +   +     +A  L   M++    P+ + +  +  G C+ G
Sbjct: 613 SIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGG 672

Query: 438 S-MDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +  A++   +M E G  P   +F  L  G
Sbjct: 673 GPIGEAVDFTVEMIERGNIPEFSSFVMLAEG 703



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 203/492 (41%), Gaps = 37/492 (7%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T +M   IE G    A  I   ++E G   + VT   L+     Q R +   S + + 
Sbjct: 240 TFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEA 299

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  PD   +N ++N   + G+ + AM+    M   GL P   TYN+LI G    G+ 
Sbjct: 300 VSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEI 359

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA--------------------- 232
           EE+VK+LD M    +  PN  TYN ++ + C E  + EA                     
Sbjct: 360 EEAVKILDQMVSR-DCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNS 418

Query: 233 --------------WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
                          ++  +M   G +PD  TYN +  +   + + ++A  ++ EME NG
Sbjct: 419 LIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNG 478

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
              N      +I G+CK  +I+EA      M+  GV  + V +N LI G  +    +   
Sbjct: 479 CARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAA 538

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           +++  M    + PD  TY++++  +   G + K  +I   M  +G  PD   Y+ L  G 
Sbjct: 539 QLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGL 598

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +    + A  LL ++   G       +  +I           A+ +F +M +    P+ 
Sbjct: 599 CKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDA 658

Query: 459 KTFETLMWGYSEARQPW-RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
            T++ +  G      P   A +    M   G  P+ S+F++LAE      +     +++ 
Sbjct: 659 ITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLCTLSMDDTLVKLVD 718

Query: 518 KIKNKERTNEME 529
            I  K + +E E
Sbjct: 719 MIMEKAKFSERE 730



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 181/386 (46%), Gaps = 10/386 (2%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P S  +  ++    ++G+ E       +MK SG       +   ++ YG     +E V +
Sbjct: 95  PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGI 154

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           + +M  E  +KP+ R YNVL+    +   +    +    M    ++ DV T+N +  A  
Sbjct: 155 VKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALC 214

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +  +   A  ++ EM   G+ P+  T   I+ GY + G +  ALR    M EYG     V
Sbjct: 215 KAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDV 274

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKE-----FRVNPDVITYSTIMNAWSTAGFMDKCKE 374
             N+LI GF +   +  +D+ L+ ++E     FR  PD  TY+T++N     G      E
Sbjct: 275 TVNVLINGFCK---QGRIDQALSFIQEAVSEGFR--PDQFTYNTLVNGLCKIGHAKHAME 329

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           + D M   G+ PD + Y+ L  G  +  E E+A ++L  M+     PN V +  IIS  C
Sbjct: 330 VVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLC 389

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +  +D A E+   +   G+ P++ TF +L+ G   +     A ++ + MK  G  P + 
Sbjct: 390 KENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEF 449

Query: 495 TFLLLAEARRATGLTKEAKRILSKIK 520
           T+ +L ++  ++   +EA  +L +++
Sbjct: 450 TYNMLIDSLCSSRKLEEALNLLKEME 475



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 184/385 (47%), Gaps = 10/385 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   L++ L + G+ +EA  I + ++     P+ VTY  ++++L  + R +    I  
Sbjct: 343 IYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIAR 402

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ PD   FN++I     S N + AMD F +MK  G  P   TYN LI     + 
Sbjct: 403 LLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSR 462

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K EE++ LL  M   G  + N+  YN L+  +C  K I EA  +  +M   G+  D VTY
Sbjct: 463 KLEEALNLLKEMELNGCAR-NVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTY 521

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+     ++   + A +++ +M   G++P+  T   +++ +CK G IK+A    +TM  
Sbjct: 522 NTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTS 581

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA-LMKEFRVNPDVIT---YSTIMNAWSTAG 367
            G +P++V +  LI G      + G  +V + L++  ++   V+T   Y+ ++ A     
Sbjct: 582 SGCNPDIVTYATLISGLC----KAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRN 637

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP-EKAEELLMTMIESGFHPNVVIF 426
              +   +F +M      PDA  Y I+ +G      P  +A +  + MIE G  P    F
Sbjct: 638 RTHEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSF 697

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCE 451
             +  G C+    D  +++ D + E
Sbjct: 698 VMLAEGLCTLSMDDTLVKLVDMIME 722



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/358 (21%), Positives = 158/358 (44%), Gaps = 2/358 (0%)

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
           W  K+    P++S Y  +++  G AG  E   ++L+ M   G  + +   + + V ++  
Sbjct: 86  WASKQPNFVPSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSG-CEFDRGIFLIFVESYGK 144

Query: 226 EKNITEAWNVMHKMAAS-GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
            +   E   ++  M     +KPD   YN +        +    E     M    ++ +  
Sbjct: 145 FELYDEVVGIVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVS 204

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T  I+I   CK  +++ A+     M  YG+ P+   F  +++G++E  + DG   +   M
Sbjct: 205 TFNILIKALCKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQM 264

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            E+      +T + ++N +   G +D+      +    G +PD   Y+ L  G  +    
Sbjct: 265 VEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHA 324

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           + A E++  M+  G  P++  + ++ISG C  G ++ A+++ D+M     SPN  T+  +
Sbjct: 325 KHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAI 384

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +    +  +   A EI +++ + G+ P   TF  L +    +   K A  +  ++K K
Sbjct: 385 ISSLCKENRVDEATEIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGK 442



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 103/227 (45%), Gaps = 4/227 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R V     L++   +  + +EA+ IF+ +   G     VTY TL+  L   KR      +
Sbjct: 481 RNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAAQL 540

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           M Q+   G+ PD   +N+++  F ++G++++A D    M  SG  P   TY TLI G   
Sbjct: 541 MDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLISGLCK 600

Query: 190 AGKPEESVKLLDLMSREGNV-KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
           AG+ + + +LL  +  +G V  P+   YN +++A        EA  +  +M      PD 
Sbjct: 601 AGRVQVASRLLRSIQMKGMVLTPH--AYNPVIQALFKRNRTHEAMRLFREMLDKSEPPDA 658

Query: 249 VTYNTIATAYAQ-NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           +TY  +        G   +A +  VEM   G  P   +  ++  G C
Sbjct: 659 ITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFVMLAEGLC 705



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 62/279 (22%), Positives = 121/279 (43%), Gaps = 1/279 (0%)

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P    Y  I     + G  +    V+ EM+ +G + +     I +  Y K     E +  
Sbjct: 95  PSSSVYEEILRKLGKAGSFEYMRRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGI 154

Query: 306 ARTMK-EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
            + M+ EY + P+   +N+L+   V+      V+   + M   R+  DV T++ ++ A  
Sbjct: 155 VKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALC 214

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
            A  +     + ++M   G+ PD   ++ + +GY+     + A  +   M+E G     V
Sbjct: 215 KAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDV 274

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
               +I+G+C  G +D+A+    +    G  P+  T+ TL+ G  +      A E++  M
Sbjct: 275 TVNVLINGFCKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAM 334

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
              G+ P   T+  L       G  +EA +IL ++ +++
Sbjct: 335 LLGGLDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRD 373


>gi|225457536|ref|XP_002272226.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial [Vitis vinifera]
 gi|297745544|emb|CBI40709.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 221/436 (50%), Gaps = 9/436 (2%)

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           +F +++    T  +   L+ +       ++A  + + +   G     V Y+ ++ +LT  
Sbjct: 173 AFLLSQRQTLTPLTYNALIGACARNDDLEKALNLMSRMRRDGFPSDFVNYSFIIQSLTRT 232

Query: 121 KRFNS--IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
            + +S  +  I +++E + ++ D    N +I  F++SG++  AM     ++ +GL+P T+
Sbjct: 233 NKSDSSMLQKIYAEIESDKIELDGQLLNDIIVGFAKSGDVNRAMSFLAMVQGNGLSPKTA 292

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           T   +I   G AG+ EE+  + + + +EG + P  R YN L++ +    ++ +A +++ +
Sbjct: 293 TLVAVITALGNAGRTEEAEAIFEEL-KEGGLMPRTRAYNALLKGYVKTGSLKDAESIVSE 351

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  SG  PD  TY+ +  AYA  G  + A  V+ EME +GV+PN      I++ Y   GK
Sbjct: 352 MERSGFSPDEHTYSLLIDAYANAGRWESARIVLKEMEASGVRPNSYVFSRILASYRDRGK 411

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVIT 355
            +++ +  R M+  GV P+   +N++I  F +    + +D  LA     R   V PD +T
Sbjct: 412 WQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKC---NCLDHALATFDRMRMEGVQPDAVT 468

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           ++T+++    +G  +K +E+F+ M ++G  P    Y+I+   +  ++  E  + LL  M 
Sbjct: 469 WNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSFGEQERWEDVKTLLGKMQ 528

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G   NVV +TT++  +   G    AIE  + M   G+ P+   +  L+  Y++     
Sbjct: 529 SQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSSTMYNALINAYAQRGLSE 588

Query: 476 RAEEILQIMKAFGVHP 491
           +A    ++M+A G+ P
Sbjct: 589 QAINAFRVMRADGLKP 604



 Score =  162 bits (410), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 107/416 (25%), Positives = 185/416 (44%), Gaps = 36/416 (8%)

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           N   S ++ V+ NG+ P +    AVI A   +G  EEA   F ++KE GL P T  YN L
Sbjct: 273 NRAMSFLAMVQGNGLSPKTATLVAVITALGNAGRTEEAEAIFEELKEGGLMPRTRAYNAL 332

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           +KGY   G  +++  ++  M R G   P+  TY++L+ A+ N      A  V+ +M ASG
Sbjct: 333 LKGYVKTGSLKDAESIVSEMERSG-FSPDEHTYSLLIDAYANAGRWESARIVLKEMEASG 391

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV------------------------ 279
           ++P+   ++ I  +Y   G+  ++ +V+ EM ++GV                        
Sbjct: 392 VRPNSYVFSRILASYRDRGKWQKSFQVLREMRNSGVSPDRHFYNVMIDTFGKCNCLDHAL 451

Query: 280 -----------QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
                      QP+  T   +I  +CK G   +A      M+E G  P    +N++I  F
Sbjct: 452 ATFDRMRMEGVQPDAVTWNTLIDCHCKSGHHNKAEELFEAMQESGCSPCTTTYNIMINSF 511

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            E    + V  +L  M+   +  +V+TY+T+++ +  +G      E  + M   G+KP +
Sbjct: 512 GEQERWEDVKTLLGKMQSQGLLANVVTYTTLVDIYGQSGRFKDAIECLEVMKSVGLKPSS 571

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y+ L   Y +    E+A      M   G  P+V++  ++I+ +  D     A  V   
Sbjct: 572 TMYNALINAYAQRGLSEQAINAFRVMRADGLKPSVLVLNSLINAFGEDRRDAEAFSVLQY 631

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           M E+ + P++ T+ TLM       +  +   + + M   G  P +    +L  A R
Sbjct: 632 MKENDLKPDVVTYTTLMKALIRVEKFDKVPAVYEEMTLSGCTPDRKARAMLRSALR 687



 Score = 42.4 bits (98), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 40/71 (56%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V  +  L+N+  E  +  EA ++   + E   KP +VTYTTL+ AL   ++F+ + ++ 
Sbjct: 605 SVLVLNSLINAFGEDRRDAEAFSVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPAVY 664

Query: 131 SQVEENGMDPD 141
            ++  +G  PD
Sbjct: 665 EEMTLSGCTPD 675


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 214/428 (50%), Gaps = 12/428 (2%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G+K S ++   L+ AL  Q R   +  +  ++    + P+   FN VINA  ++G M +A
Sbjct: 183 GYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKA 242

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGY---GIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
            D    MK  G +P   +YNTLI GY   G  GK  ++  +L  M  E  V PNL T+N+
Sbjct: 243 RDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMV-ENEVSPNLTTFNI 301

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L+  +  + N+  +  V  +M    + P+V+TYN++       G+ ++A  +  +M   G
Sbjct: 302 LIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAG 361

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           VQPN  T   +I+G+CK G +KEAL    ++K  G  P   ++N+LI  + ++     +D
Sbjct: 362 VQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKL---GKID 418

Query: 339 EVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
           +  AL +E     + PDV TY+ ++      G ++  K++FD +   G+ PD   + IL 
Sbjct: 419 DGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILM 477

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM-CEHGV 454
           +GY    E  KA  LL  M + G  P  + +  ++ G+C +G++  A  +  +M  E  +
Sbjct: 478 EGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRL 537

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
             N+ ++  L+ GYS+  +   A  +L  M   G+ P + T+ ++ E     G   + + 
Sbjct: 538 RMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPDIEG 597

Query: 515 ILSKIKNK 522
            L  +  K
Sbjct: 598 HLFNVSTK 605



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 210/435 (48%), Gaps = 28/435 (6%)

Query: 113 LLAALTIQKRFNSIHSIMSQVEENGMDP------------DSIFFNAVIN-----AFSES 155
           LL +L   KR++ I S +     NG D             D++  N++I      A++ +
Sbjct: 107 LLHSLANAKRYSKIRSFLDGFVRNGSDHQVHSIFHAISMCDNVCVNSIIADMLVLAYANN 166

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
              E   + F +    G   +  +   L+       +  +   L   M R   ++PN+ T
Sbjct: 167 SRFELGFEAFKRSGYYGYKLSAMSCKPLMVALLKQNRSADVEYLYKEMIRR-KIQPNVFT 225

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ---NGEADQAEEVIV 272
           +NV++ A C    + +A +VM  M   G  P+VV+YNT+   Y +   NG+  +A+ V+ 
Sbjct: 226 FNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLK 285

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           EM  N V PN  T  I+I G+ K+  +  +L+  + M +  V PN++ +N LI G   + 
Sbjct: 286 EMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLING---LC 342

Query: 333 DRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +   ++E + +   M    V P++ITY +++N +   G M +  ++FD +   G +P   
Sbjct: 343 NGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTR 402

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y++L   Y +  + +    L   M   G  P+V  +  +I+G C +G+++ A ++FD++
Sbjct: 403 MYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQL 462

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G+ P+L TF  LM GY    +  +A  +L+ M   G+ P+  T+ ++ +     G  
Sbjct: 463 TNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNL 521

Query: 510 KEAKRILSKIKNKER 524
           K A  + ++++ + R
Sbjct: 522 KAATNMRTQMEKERR 536



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 183/362 (50%), Gaps = 6/362 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL---AALTIQKRFNSIHS 128
           V +   ++N+L + GK  +A+ +  ++   G+ P++V+Y TL+     L    +     +
Sbjct: 223 VFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYCKLGGNGKMYKADA 282

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++ ++ EN + P+   FN +I+ F +  N+  ++  F +M +  + P   TYN+LI G  
Sbjct: 283 VLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLC 342

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             GK  E++ + D M   G V+PNL TY+ L+  +C    + EA ++   +   G +P  
Sbjct: 343 NGGKINEAIGMRDKMVSAG-VQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTT 401

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
             YN +  AY + G+ D    +  EME  G+ P+  T   +I+G C+ G I+ A +    
Sbjct: 402 RMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQ 461

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           +   G+ P+LV F++L++G+    +      +L  M +  + P  +TY+ +M  +   G 
Sbjct: 462 LTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGN 520

Query: 369 MDKCKEIFDDMGKA-GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
           +     +   M K   ++ +  +Y++L +GY ++ + E A  LL  M+E G  PN + + 
Sbjct: 521 LKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYE 580

Query: 428 TI 429
            +
Sbjct: 581 IV 582



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/277 (30%), Positives = 147/277 (53%), Gaps = 3/277 (1%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +F  +++    P+++TY +L+  L    + N    +  ++   G+ P+ I ++++IN F 
Sbjct: 318 VFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFC 377

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           ++G M+EA+D F  +K  G  PTT  YN LI  Y   GK ++   L + M REG V P++
Sbjct: 378 KNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIV-PDV 436

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            TYN L+   C   NI  A  +  ++   G+ PD+VT++ +   Y   GE+ +A  ++ E
Sbjct: 437 GTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKE 495

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGFVEIM 332
           M   G++P   T  I++ GYCKEG +K A      M KE  +  N+  +N+L++G+ +  
Sbjct: 496 MSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKG 555

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
             +  + +L  M E  + P+ ITY  +       GF+
Sbjct: 556 KLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFV 592



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 170/339 (50%), Gaps = 19/339 (5%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  +A A+   ++E    P+L T+  L+              +  ++ +  + P+ I +
Sbjct: 275 GKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITY 334

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N++IN     G + EA+    KM  +G+ P   TY++LI G+   G  +E++ + D +  
Sbjct: 335 NSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKG 394

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G  +P  R YN+L+ A+C    I + + +  +M   G+ PDV TYN +     +NG  +
Sbjct: 395 QG-TRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIE 453

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A+++  ++ + G+ P+  T  I++ GYC  G+ ++A    + M + G+ P  + +N+++
Sbjct: 454 AAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMM 512

Query: 326 KGFVEIMDRDGVDEVLALM-KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           KG+ +  +      +   M KE R+  +V +Y+ ++  +S  G ++    + ++M + G+
Sbjct: 513 KGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGL 572

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
            P+   Y I     V+E+           M++ GF P++
Sbjct: 573 VPNRITYEI-----VKEE-----------MVDKGFVPDI 595


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 210/430 (48%), Gaps = 8/430 (1%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           F  +I  G  PS+     +L  L   +  N   ++   + E+G+ P  I FN ++++  +
Sbjct: 191 FEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFK 250

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG-NVKPNL 213
           +G++E     + +MK   +  +  TYN LI G+   GK EE+ +    M R G  V P  
Sbjct: 251 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTP-- 308

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            ++N L+  +C +    +AW V  +M  +G+ P   TYN    A    G  D A E++  
Sbjct: 309 YSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSS 368

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M      P+  +   ++ GY K GK  EA      ++   +HP++V +N LI G  E  +
Sbjct: 369 M----AAPDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGN 424

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            +G   +   M    + PDVITY+T++  +   G +    E++D+M + GIKPD +AY+ 
Sbjct: 425 LEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT 484

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFH-PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            A G +R  + +KA  L   M+ +  H P++ I+   I G C  G++ +AIE   K+   
Sbjct: 485 RAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRV 544

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G+ P+  T+ T++ GY E  Q   A  +   M    ++P   T+ +L       G  ++A
Sbjct: 545 GLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQA 604

Query: 513 KRILSKIKNK 522
            +  +++K +
Sbjct: 605 FQYSTEMKKR 614



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 216/465 (46%), Gaps = 41/465 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +VR+   ++  L +     +A A++  +IE G  P+++T+ T+L +         +  I 
Sbjct: 202 SVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIW 261

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++   ++   + +N +IN FS++G MEEA      M+ SG   T  ++N LI+GY   
Sbjct: 262 LEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQ 321

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +++  + D M   G + P   TYN+ + A C+   I +A  ++  MAA    PDVV+
Sbjct: 322 GLFDDAWGVTDEMLNAG-IYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVS 376

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+   Y + G+  +A  +  ++    + P+  T   +I G C+ G ++ A R    M 
Sbjct: 377 YNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 436

Query: 311 EYGVHPNLVIFNLLIKGFV---------EIMD---RDGV--------------------D 338
              + P+++ +  L+KGFV         E+ D   R G+                    D
Sbjct: 437 TQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLGDSD 496

Query: 339 EVLALMKEFRVN----PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           +   L +E        PD+  Y+  ++     G + K  E    + + G+ PD   Y+ +
Sbjct: 497 KAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTV 556

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            +GY+   + + A  L   M+    +P+V+ +  +I G    G +++A +   +M + GV
Sbjct: 557 IRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGV 616

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
            PN+ T   L++G  +A     A   L  M+  G+ P K ++ +L
Sbjct: 617 RPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTML 661



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/411 (23%), Positives = 164/411 (39%), Gaps = 71/411 (17%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   LM+  I+ GK  EA  +F++L  G   PS+VTY TL+  L           +  
Sbjct: 374 VVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKE 433

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++    + PD I +  ++  F ++GN+  A + + +M   G+ P    Y T   G    G
Sbjct: 434 EMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRLG 493

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +++ +L + M    +  P+L  YNV +   C   N+ +A     K+   G+ PD VTY
Sbjct: 494 DSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTY 553

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+                                   I GY + G+ K           
Sbjct: 554 TTV-----------------------------------IRGYLENGQFK----------- 567

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
                               M R+  DE+L      R+ P VITY  ++   + AG +++
Sbjct: 568 --------------------MARNLYDEML----RKRLYPSVITYFVLIYGHAKAGRLEQ 603

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             +   +M K G++P+   ++ L  G  +    ++A   L  M E G  PN   +T +IS
Sbjct: 604 AFQYSTEMKKRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLIS 663

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
             C     +  ++++ +M +  + P+  T   L + + E     R  E L+
Sbjct: 664 KNCDFEKWEEVVKLYKEMLDKEIEPDGYTHRAL-FKHLEKDHESREVEFLE 713



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 152/341 (44%), Gaps = 18/341 (5%)

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK--P 246
           I  KPE + +  + + R+ +VK + + +  ++        ++EA+ V  +    GM    
Sbjct: 95  IRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSIDLGMHEID 154

Query: 247 DVVTYNTIAT------------AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           D++   +                Y +   A++      +M   G  P+ R C I++    
Sbjct: 155 DLLIDGSFDKLIALKLLDLLLWVYTKKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLR 214

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
               + +A     TM E+G+ P ++ FN ++    +  D + VD++   MK   +    +
Sbjct: 215 DSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEV 274

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           TY+ ++N +S  G M++ +    DM ++G     ++++ L +GY ++   + A  +   M
Sbjct: 275 TYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEM 334

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           + +G +P    +   I   C  G +D A E+   M     +P++ ++ TLM GY +  + 
Sbjct: 335 LNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMA----APDVVSYNTLMHGYIKMGKF 390

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
             A  +   ++A  +HP   T+  L +    +G  + A+R+
Sbjct: 391 VEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRL 431


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 224/477 (46%), Gaps = 21/477 (4%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  E C     +   L+  LI+  K  +A A+   + E G  P ++TYTTL+     +  
Sbjct: 484 MEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHE 543

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F++   +   +E+NG+ PD   +N + +A  +SG  EEA   +  +   G+  T  TY +
Sbjct: 544 FDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKVTYTS 600

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ G+  AG  + +  L++ M  EG  K +L TY+VL++A C +K + EA +++ +M  S
Sbjct: 601 LVDGFSKAGNTDFAAVLIEKMVNEG-CKADLYTYSVLLQALCKQKKLNEALSILDQMTVS 659

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+K ++V Y  I +   + G+ D A+ +  EM  +G +P+  T  + IS YCK G+I+EA
Sbjct: 660 GVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEA 719

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M+  GV P++V +N+ I G   +   D     L  M +    P+  TY  ++  
Sbjct: 720 EHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKH 779

Query: 363 W-----------STAGF-----MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
           +            T+G      ++   ++ + M K G+ P    YS +  G+ +    E+
Sbjct: 780 FLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEE 839

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  LL  M+     PN  I+T +I   C      +A+     M E G  P L+++  L+ 
Sbjct: 840 ACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIV 899

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           G  +     RA+ +   +     +  +  + +L +     G      ++L+ + N+ 
Sbjct: 900 GLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRH 956



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 207/450 (46%), Gaps = 5/450 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R   S T L+  L E    +EA  +   ++  G   +L TYT L+  L  + R +    +
Sbjct: 247 RNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGL 306

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++   G+ P    +NA+I+ + +SG M++A+     M+++G  P   TYN+LI G   
Sbjct: 307 LDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL-C 365

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            GK +E+ +LL+     G   P + T+  L+  +C  + I +A  V   M +S  K D+ 
Sbjct: 366 GGKLDEAEELLNGAIARG-FTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQ 424

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y  +     +     +A+E + EM  NG+ PN  T   II GYCK G +  AL   + M
Sbjct: 425 AYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLM 484

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +  G HPN   +  LI G ++         ++  M+E  + P VITY+T++         
Sbjct: 485 EHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEF 544

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D    +F+ M + G+ PD  AY++L     +    E+A   L   +  G     V +T++
Sbjct: 545 DNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSL 601

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+   G+ D A  + +KM   G   +L T+  L+    + ++   A  IL  M   GV
Sbjct: 602 VDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGV 661

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKI 519
                 + ++       G    AK + +++
Sbjct: 662 KCNIVAYTIIISEMIKEGKHDHAKSLFNEM 691



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 192/377 (50%), Gaps = 6/377 (1%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           + S + + G+ PD++ +N +I A+ + G++  A   F  ++ESG+   T T N L+ GY 
Sbjct: 166 LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYC 225

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
                 ++  LL +M   G  + N  +Y +L++  C  + + EA  ++  M   G   ++
Sbjct: 226 RTSDLRKACWLLMMMPLMG-CRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNL 284

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TY  +     + G    A  ++ EM   GV P+  T   +I GYCK G++K+AL     
Sbjct: 285 HTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL--ALMKEFRVNPDVITYSTIMNAWSTA 366
           M++ G +P+   +N LI G       D  +E+L  A+ + F   P VIT++ ++N +  A
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGF--TPTVITFTNLINGYCKA 401

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             +D    +  +M  +  K D  AY +L    +++   ++A+E L  M  +G  PNVV +
Sbjct: 402 ERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTY 461

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           T+II G+C  G +  A+EVF  M   G  PN  T+ +L++G  + ++  +A  ++  M+ 
Sbjct: 462 TSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQE 521

Query: 487 FGVHPQKSTFLLLAEAR 503
            G+ P   T+  L + +
Sbjct: 522 DGITPGVITYTTLIQGQ 538



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 210/478 (43%), Gaps = 38/478 (7%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           + SL+     +    ++++L++ G  P  VTY T++ A   +      H     + E+GM
Sbjct: 151 LRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGM 210

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
             D+   NA++  +  + ++ +A      M   G      +Y  LI+G   A    E++ 
Sbjct: 211 QMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCVREALV 270

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           L+ +M  +G    NL TY +L++  C E  I +A  ++ +M   G+ P V TYN +   Y
Sbjct: 271 LVFMMVHDG-CSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGY 329

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRT--------CG----------------------- 287
            ++G    A  +   ME NG  P+  T        CG                       
Sbjct: 330 CKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVI 389

Query: 288 ---IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
               +I+GYCK  +I +ALR    M       +L  + +LI   ++        E L  M
Sbjct: 390 TFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEM 449

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
               + P+V+TY++I++ +   G +    E+F  M   G  P+A  Y  L  G +++++ 
Sbjct: 450 FANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKL 509

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            KA  L+  M E G  P V+ +TT+I G C     D A  +F+ M ++G++P+ + +  L
Sbjct: 510 HKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVL 569

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
                ++    RAEE    +   GV   K T+  L +     G T  A  ++ K+ N+
Sbjct: 570 TDALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE 624



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/370 (25%), Positives = 163/370 (44%), Gaps = 17/370 (4%)

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           SF + K    T  + T L++   + G    A  +   ++  G K  L TY+ LL AL  Q
Sbjct: 584 SFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQ 643

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
           K+ N   SI+ Q+  +G+  + + +  +I+   + G  + A   F +M  SG  P+ +TY
Sbjct: 644 KKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTY 703

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
              I  Y   G+ EE+  L+  M R+G V P++ TYN+ +    +   I  A++ + +M 
Sbjct: 704 TVFISSYCKIGRIEEAEHLIGEMERDG-VTPDVVTYNIFINGCGHMGYIDRAFSTLKRMV 762

Query: 241 ASGMKPDVVTY----------NTIATAYAQNG------EADQAEEVIVEMEHNGVQPNGR 284
            +  +P+  TY          + I   Y          E +   +++  M  +G+ P   
Sbjct: 763 DASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHGLNPTVV 822

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T   II+G+CK  +++EA      M    + PN  I+ +LIK   +I         +  M
Sbjct: 823 TYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVTDM 882

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            EF   P + +Y  ++      G  D+ K +F D+       +  A+ IL  G ++    
Sbjct: 883 IEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHV 942

Query: 405 EKAEELLMTM 414
           +   +LL  M
Sbjct: 943 DFCSQLLAAM 952


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 211/421 (50%), Gaps = 4/421 (0%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G K S+ +   L++ L        +  +  ++    ++P  I FN VIN   + G + +A
Sbjct: 123 GLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKA 182

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGY---GIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
            D    MK  G++    TYNTLI GY   G  GK  ++  +L  M  +G + PN  T+N+
Sbjct: 183 GDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADG-ICPNEVTFNI 241

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L+  +C +KN++ A  V  +M   G+KP+VVTYN++      NG+ ++A  +  +M ++ 
Sbjct: 242 LIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSC 301

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           ++PN  T   +++G+CK   +K+A      M + G+ PN+  +N+LI  + +  + +   
Sbjct: 302 LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAF 361

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            +  +M    V PDV TY+ ++      G ++  + +  +M    +K D   Y+IL    
Sbjct: 362 ALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSL 421

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
             + E +KA  LL  M   G  P+ + + T+I G+C +G++  A+ +  +M + G   N+
Sbjct: 422 CNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANV 481

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+  L+ G+ +  +   A  +L  M   G+ P + T+ ++ E     G   + +  L K
Sbjct: 482 ATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYK 541

Query: 519 I 519
           +
Sbjct: 542 V 542



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 180/397 (45%), Gaps = 39/397 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH--- 127
           T+ S   ++N L + GK  +A  I  ++   G   +++TY TL+       +   ++   
Sbjct: 162 TLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKAD 221

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           +I+ ++  +G+ P+ + FN +I+ F +  N+  AM  F +M   G+ P   TYN+LI G 
Sbjct: 222 AILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGL 281

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              GK  E+  L D M     +KPN+ T+N L+  +C  K + +A  +   M   G+ P+
Sbjct: 282 CNNGKVNEATALRDQMVNSC-LKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPN 340

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           V TYN +  AY ++   + A  +   M   GV P+  T   +I+G C++G ++ A     
Sbjct: 341 VTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVS 400

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M    +  +L+ +N+LI                                   ++    G
Sbjct: 401 EMDTKHLKADLITYNILI-----------------------------------DSLCNKG 425

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            M K   + D+M + G+KP    Y+ +  GY +E     A  L   M + G   NV  + 
Sbjct: 426 EMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYN 485

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            +I G+C    ++ A  + ++M E G+ PN  T+E +
Sbjct: 486 VLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIV 522



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 83/279 (29%), Positives = 148/279 (53%), Gaps = 1/279 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A  +F  +   G KP++VTY +L+  L    + N   ++  Q+  + + P+ I  NA++N
Sbjct: 255 AMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLN 314

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            F ++  +++A + F  M + G+TP  +TYN LI  Y      E++  L  +M  +G V 
Sbjct: 315 GFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG-VC 373

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P++ TYN L+   C + ++  A N++ +M    +K D++TYN +  +    GE  +A  +
Sbjct: 374 PDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRL 433

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + EM   G++P+  T   +I GYCKEG ++ AL     M++ G   N+  +N+LIKGF +
Sbjct: 434 LDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCK 493

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
               +  + +L  M E  + P+ +TY  +       GF+
Sbjct: 494 KDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 169/338 (50%), Gaps = 17/338 (5%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  +A AI   +   G  P+ VT+  L+      K  ++   + +++   G+ P+ + +
Sbjct: 215 GKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTY 274

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N++IN    +G + EA     +M  S L P   T+N L+ G+      +++ +L D M +
Sbjct: 275 NSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPK 334

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G + PN+ TYN+L+ A+C ++N+ +A+ +   M   G+ PDV TYN +     + G+ +
Sbjct: 335 QG-ITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLE 393

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A  ++ EM+   ++ +  T  I+I   C +G++K+ALR    M   G+ P+ + +N +I
Sbjct: 394 AARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMI 453

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G+ +  +      + + M++     +V TY+ ++  +     ++    + ++M + G+ 
Sbjct: 454 DGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLI 513

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
           P+   Y I+             EE    M+E GF P++
Sbjct: 514 PNRMTYEIV------------TEE----MMEKGFVPDI 535



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 139/272 (51%), Gaps = 7/272 (2%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           MN++  +  V +   L+N L   GK  EA A+ + ++    KP+++T+  LL      K 
Sbjct: 262 MNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKM 321

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +   + + G+ P+   +N +I+A+ +  NME+A   +  M   G+ P  STYN 
Sbjct: 322 VKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNC 381

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G    G  E +  L+  M  + ++K +L TYN+L+ + CN+  + +A  ++ +M   
Sbjct: 382 LIAGLCRKGDLEAARNLVSEMDTK-HLKADLITYNILIDSLCNKGEMKKALRLLDEMCRK 440

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+KP  +TYNT+   Y + G    A  +  +ME  G   N  T  ++I G+CK+ K+++A
Sbjct: 441 GLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDA 500

Query: 303 LRFARTMKEYGVHPNLVIFNLLI-----KGFV 329
                 M E G+ PN + + ++      KGFV
Sbjct: 501 NGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 77/309 (24%), Positives = 151/309 (48%), Gaps = 3/309 (0%)

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           ++LV A+         +    + +  G+K  V + N + +   + GE    E V  EM  
Sbjct: 97  DILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVYKEMIR 156

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
             ++P   +  I+I+G CK GK+ +A      MK  GV  N++ +N LI G+ ++     
Sbjct: 157 RRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKMGKIGK 216

Query: 337 VDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
           + +  A++KE R +   P+ +T++ +++ +     +    ++F +M + G+KP+   Y+ 
Sbjct: 217 MYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNS 276

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L  G     +  +A  L   M+ S   PN++    +++G+C +  + +A E+FD M + G
Sbjct: 277 LINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQG 336

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           ++PN+ T+  L+  Y +      A  + +IM   GV P  ST+  L       G  + A+
Sbjct: 337 ITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAAR 396

Query: 514 RILSKIKNK 522
            ++S++  K
Sbjct: 397 NLVSEMDTK 405



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/275 (24%), Positives = 134/275 (48%), Gaps = 3/275 (1%)

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
           E   ++  ++      + +  + +  AYA+N       E        G++ +  +C  ++
Sbjct: 76  EQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLM 135

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
           SG  K G+I +     + M    + P L+ FN++I G  ++   +   +++  MK   V+
Sbjct: 136 SGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVS 195

Query: 351 PDVITYSTIMNAW---STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            +VITY+T+++ +      G M K   I  +M   GI P+   ++IL  G+ +++    A
Sbjct: 196 ANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAA 255

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            ++   M   G  PNVV + ++I+G C++G ++ A  + D+M    + PN+ T   L+ G
Sbjct: 256 MKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNG 315

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           + + +   +A E+   M   G+ P  +T+ +L +A
Sbjct: 316 FCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDA 350



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 102/210 (48%), Gaps = 3/210 (1%)

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
           N    +  ++++ +  +    N     I++  Y K  + +      +   +YG+  ++  
Sbjct: 71  NYSTQEQTQILLSVSGDSFCANSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTS 130

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
            N L+ G V++ +   ++ V   M   R+ P +I+++ ++N     G ++K  +I +DM 
Sbjct: 131 CNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMK 190

Query: 381 KAGIKPDAHAYSILAKGYVREQEP---EKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
             G+  +   Y+ L  GY +  +     KA+ +L  M   G  PN V F  +I G+C D 
Sbjct: 191 VRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDK 250

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           ++  A++VF +M   GV PN+ T+ +L+ G
Sbjct: 251 NVSAAMKVFAEMNRQGVKPNVVTYNSLING 280


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 206/413 (49%), Gaps = 4/413 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K +EA+ + NN ++ G  P++VT+T L+    + ++F+    + +++  +    D   F 
Sbjct: 257 KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFG 316

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +IN+  +   ++EA +   ++  +GL P   TY ++I GY  +GK + ++++L +M R+
Sbjct: 317 KLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERD 376

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +PN  TYN L+     +K + +A  ++ KM   G+ P+V+TY T+        + D 
Sbjct: 377 G-CQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDN 435

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  +   ME NG++P+     ++    CK G+ +EA  F   +   GV    V +  LI 
Sbjct: 436 AFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLID 492

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GF +  + D    ++  M +    PD  TYS +++A      +++   I D M   GIK 
Sbjct: 493 GFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKC 552

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
              AY+IL    +RE + + A+ +   M  SG  P+   +T  I+ +C +G ++ A ++ 
Sbjct: 553 TIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLI 612

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
            KM   GV+P++ T+  L+ G        RA   L+ M      P   T+ LL
Sbjct: 613 LKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLL 665



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 235/489 (48%), Gaps = 35/489 (7%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C   VR+ T L++ L + G+  +A+ +F+ + + G  PS++TY  ++   +   R
Sbjct: 164 MKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGR 223

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            N    I   +E+NG  PD   +N +I    +    EEA +      + G TPT  T+  
Sbjct: 224 MNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTN 282

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY +A K ++++++ + M      K +L+ +  L+ +   +  + EA  ++++++A+
Sbjct: 283 LINGYCMAEKFDDALRMKNKM-MSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISAN 341

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P+V+TY +I   Y ++G+ D A EV+  ME +G QPN  T   ++ G  K+ K+ +A
Sbjct: 342 GLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKA 401

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD-----VIT-- 355
           +     M++ G+ PN++ +  L++G  +  D D    +  +M++  + PD     V+T  
Sbjct: 402 MALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDA 461

Query: 356 -------------------------YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
                                    Y+T+++ +S AG  D    + + M   G  PD++ 
Sbjct: 462 LCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYT 521

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YS+L     +++   +A  +L  M   G    +  +T +I     +G  D A  ++++M 
Sbjct: 522 YSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMT 581

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
             G  P+  T+   +  Y +  +   AE+++  M+  GV P   T+ +L +     G   
Sbjct: 582 SSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYID 641

Query: 511 EAKRILSKI 519
            A   L ++
Sbjct: 642 RAFSTLKRM 650



 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 220/451 (48%), Gaps = 7/451 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R   S T L+  L +    ++A  +F  +   G  P++  +T L++ L    R      +
Sbjct: 136 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 195

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
              + +NG+ P  + +NA+I  +S+ G M +A+     M+++G  P   TYNTLI  YG+
Sbjct: 196 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLI--YGL 253

Query: 190 AG-KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
              K EE+ +LL+   +EG   P + T+  L+  +C  +   +A  + +KM +S  K D+
Sbjct: 254 CDQKTEEAEELLNNAVKEG-FTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDL 312

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
             +  +  +  +     +A+E++ E+  NG+ PN  T   II GYCK GK+  AL   + 
Sbjct: 313 QVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKM 372

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M+  G  PN   +N L+ G V+         +L  M++  + P+VITY+T++        
Sbjct: 373 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 432

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            D    +F+ M + G+KPD HAY++L     +     +AEE    ++  G     V +TT
Sbjct: 433 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCK---AGRAEEAYSFIVRKGVALTKVYYTT 489

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G+   G+ D A  + ++M + G +P+  T+  L+    + ++   A  IL  M   G
Sbjct: 490 LIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRG 549

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +      + +L +     G    AKR+ +++
Sbjct: 550 IKCTIFAYTILIDEMLREGKHDHAKRMYNEM 580



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 216/454 (47%), Gaps = 56/454 (12%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C+    +   LM  L++  K  +A A+   + + G  P+++TYTTLL     +  
Sbjct: 373 MERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHD 432

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F++   +   +E+NG+ PD   +  + +A  ++G  EEA   +  +   G+  T   Y T
Sbjct: 433 FDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEA---YSFIVRKGVALTKVYYTT 489

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+  AG  + +  L++ M  EG   P+  TY+VL+ A C +K + EA  ++ +M+  
Sbjct: 490 LIDGFSKAGNTDFAATLIERMIDEG-CTPDSYTYSVLLHALCKQKRLNEALPILDQMSLR 548

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+K  +  Y  +     + G+ D A+ +  EM  +G +P+  T  + I+ YCKEG++++A
Sbjct: 549 GIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDA 608

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                              +L++K     M+R+GV             PDV+TY+ +++ 
Sbjct: 609 ------------------EDLILK-----MEREGV------------APDVVTYNILIDG 633

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK-------GYVREQ---------EPEK 406
               G++D+       M  A  +P+   Y +L K        YVR           E + 
Sbjct: 634 CGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDI 693

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
             +LL  M++ G +P V  ++++I+G+C  G ++ A  + D MC  G+SPN   +  L+ 
Sbjct: 694 TWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIK 753

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
              + +   +A   + IM   G  PQ  ++ LL 
Sbjct: 754 CCCDTKFFEKALSFVSIMSECGFQPQLESYRLLV 787



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 209/461 (45%), Gaps = 40/461 (8%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +++ L++ G  P  VTY T++ +   +    + H     + E G++P++   NA++  + 
Sbjct: 55  VYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYC 114

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
            +G + +A   F  M   G      +Y  LI+G   A    +++ L  +M R+G   PN+
Sbjct: 115 RTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDG-CSPNV 173

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
           R +  L+   C    + +A  +   M  +G+ P V+TYN +   Y++ G  + A ++   
Sbjct: 174 RAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKEL 233

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV---- 329
           ME NG  P+  T   +I G C + K +EA        + G  P +V F  LI G+     
Sbjct: 234 MEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEK 292

Query: 330 ----------------------------EIMDRDGVDEVLALMKEFRVN---PDVITYST 358
                                        ++ +D + E   L+ E   N   P+VITY++
Sbjct: 293 FDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTS 352

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           I++ +  +G +D   E+   M + G +P+A  Y+ L  G V++++  KA  LL  M + G
Sbjct: 353 IIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDG 412

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PNV+ +TT++ G C +   D A  +F+ M ++G+ P+   +  L     +A    RAE
Sbjct: 413 IIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKA---GRAE 469

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           E    +   GV   K  +  L +     G T  A  ++ ++
Sbjct: 470 EAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 510



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/393 (24%), Positives = 177/393 (45%), Gaps = 35/393 (8%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +N  + + +     E     + ++ + GL P T TYNT+IK Y   G    + +   L+ 
Sbjct: 36  YNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCKEGDLTTAHRYFRLL- 94

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
            EG ++P   T N LV  +C    + +A  +   M   G + +  +Y  +          
Sbjct: 95  LEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTILIQGLCDAKCV 154

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A  + + M+ +G  PN R    +ISG CK G++ +A      M + GV P+++ +N +
Sbjct: 155 RKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAM 214

Query: 325 IKGFV------------EIMDRDGV----------------------DEVLALMKEFRVN 350
           I G+             E+M+++G                       +E+L    +    
Sbjct: 215 IVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQKTEEAEELLNNAVKEGFT 274

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P V+T++ ++N +  A   D    + + M  +  K D   +  L    +++   ++A+EL
Sbjct: 275 PTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKEL 334

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           L  +  +G  PNV+ +T+II G+C  G +D A+EV   M   G  PN  T+ +LM+G  +
Sbjct: 335 LNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVK 394

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
            ++  +A  +L  M+  G+ P   T+  L + +
Sbjct: 395 DKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQ 427



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 165/370 (44%), Gaps = 17/370 (4%)

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           SF + K    T    T L++   + G    A  +   +I+ G  P   TY+ LL AL  Q
Sbjct: 473 SFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQ 532

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
           KR N    I+ Q+   G+      +  +I+     G  + A   + +M  SG  P+ +TY
Sbjct: 533 KRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTY 592

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
              I  Y   G+ E++  L+  M REG V P++ TYN+L+    +   I  A++ + +M 
Sbjct: 593 TVFINSYCKEGRLEDAEDLILKMEREG-VAPDVVTYNILIDGCGHMGYIDRAFSTLKRMV 651

Query: 241 ASGMKPDVVTYNTIA-------TAYAQNG---------EADQAEEVIVEMEHNGVQPNGR 284
            +  +P+  TY  +         AY ++          E D   +++  M  +G+ P   
Sbjct: 652 GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNPTVT 711

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T   +I+G+CK G+++EA      M   G+ PN  I+ LLIK   +    +     +++M
Sbjct: 712 TYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFVSIM 771

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            E    P + +Y  ++      G  +K K +F D+ + G   D  A+ IL  G ++    
Sbjct: 772 SECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKAGYV 831

Query: 405 EKAEELLMTM 414
           +   ++L  M
Sbjct: 832 DICFQMLSIM 841



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/351 (25%), Positives = 154/351 (43%), Gaps = 38/351 (10%)

Query: 203 MSREGNVKPNL--RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
           + R G+ +  L  + YN  +R+            V  ++   G+ PD VTYNT+  +Y +
Sbjct: 21  IRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMIKSYCK 80

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
            G+   A      +   G++P   TC  ++ GYC+ G++++A      M   G   N   
Sbjct: 81  EGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYS 140

Query: 321 FNLLIKGFVE------------IMDRDGVDE--------VLALMKEFRVN---------- 350
           + +LI+G  +            +M RDG           +  L K  RV           
Sbjct: 141 YTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMP 200

Query: 351 -----PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
                P V+TY+ ++  +S  G M+   +I + M K G  PD   Y+ L  G   +Q+ E
Sbjct: 201 QNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC-DQKTE 259

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +AEELL   ++ GF P VV FT +I+G+C     D A+ + +KM       +L+ F  L+
Sbjct: 260 EAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLI 319

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
               +  +   A+E+L  + A G+ P   T+  + +    +G    A  +L
Sbjct: 320 NSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVL 370



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/333 (23%), Positives = 151/333 (45%), Gaps = 17/333 (5%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++L ++ +  EA  I + +   G K ++  YT L+  +  + + +    + +++  +G
Sbjct: 525 LLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSG 584

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P +  +   IN++ + G +E+A D   KM+  G+ P   TYN LI G G  G  + + 
Sbjct: 585 HKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAF 644

Query: 198 KLLDLMSREGNVKPNLRTYNVLVR-------AWCNEKNITEAWNV---------MHKMAA 241
             L  M    + +PN  TY +L++       A+    + +  WN+         + +M  
Sbjct: 645 STLKRMV-GASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVK 703

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G+ P V TY+++   + + G  ++A  ++  M   G+ PN     ++I   C     ++
Sbjct: 704 HGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEK 763

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           AL F   M E G  P L  + LL+ G     D + V  +   + E   N D + +  + +
Sbjct: 764 ALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILND 823

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
               AG++D C ++   M K      +  Y+++
Sbjct: 824 GLLKAGYVDICFQMLSIMEKRYCCISSQTYALV 856



 Score = 42.7 bits (99), Expect = 0.52,   Method: Compositional matrix adjust.
 Identities = 29/135 (21%), Positives = 55/135 (40%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV + + L+    + G+ +EA  + +++   G  P+   YT L+      K F    S +
Sbjct: 709 TVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFV 768

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S + E G  P    +  ++      G+ E+    F  + E G       +  L  G   A
Sbjct: 769 SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDGLLKA 828

Query: 191 GKPEESVKLLDLMSR 205
           G  +   ++L +M +
Sbjct: 829 GYVDICFQMLSIMEK 843


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/446 (27%), Positives = 214/446 (47%), Gaps = 9/446 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIMSQ 132
           +   L+  L   GK  EA  +F+  I  G +P +VTY TL+  L  +     +I  + S 
Sbjct: 222 TFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSM 281

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           V++N   P+ I +N +I++  +   + EA + F +M   G++P   TYN+LI       +
Sbjct: 282 VQKN-CRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCE 340

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +    LL+ M     + PN+  ++ +V A C E  I  A +V+  M   G++PDVVTY 
Sbjct: 341 WKHVTTLLNEMVNS-KIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYT 399

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +   +    E D+A +V   M H G  PN R+  I+I+GYC+  ++ +A+     M   
Sbjct: 400 ALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ 459

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFM 369
           G+  + V +N LI G   +     +   +AL  E   +   PD++TY  +++       +
Sbjct: 460 GLIADTVTYNTLIHGLCHV---GRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHL 516

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +   +   +  + +  D   Y+I   G  R  E E A +L   +   G  P+V  +  +
Sbjct: 517 AEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIM 576

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G C  G +D A ++F KM E+G S +   + T++ G+  + + + A ++LQ M A G 
Sbjct: 577 IHGLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGF 636

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRI 515
               ST  L+ E     GL +  +R+
Sbjct: 637 SADVSTTTLIVEMLSDDGLDQSFERL 662



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 206/433 (47%), Gaps = 1/433 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A + FN ++     PS V +T LL ++   K ++++ S+ +Q++  G+ PD    N +I
Sbjct: 133 DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 192

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N+F     +  A     K+ + G  P  +T+NTLI+G  + GK  E++ L D    EG  
Sbjct: 193 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG-F 251

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +P++ TY  L+   C   N + A  ++  M     +P+V+ YNTI  +  ++ +  +A  
Sbjct: 252 QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFN 311

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  EM   G+ P+  T   +I   C   + K        M    + PN+V+F+ ++    
Sbjct: 312 LFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALC 371

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +        +V+ +M +  V PDV+TY+ +M+       MD+  ++FD M   G  P+  
Sbjct: 372 KEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVR 431

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           +Y+IL  GY + Q  +KA  LL  M   G   + V + T+I G C  G +  AI +F +M
Sbjct: 432 SYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM 491

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G  P+L T+  L+    +      A  +L+ ++   +      + +  +     G  
Sbjct: 492 VASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGEL 551

Query: 510 KEAKRILSKIKNK 522
           + A+ + S + +K
Sbjct: 552 EAARDLFSNLSSK 564



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 98/382 (25%), Positives = 199/382 (52%), Gaps = 3/382 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +++CR  V +   +++SL +  +  EA  +F+ +I  G  P + TY +L+ AL     
Sbjct: 281 MVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCE 340

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +  + ++++++  + + P+ + F+ V++A  + G +  A D    M + G+ P   TY  
Sbjct: 341 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 400

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ G+ +  + +E+VK+ D M  +G V PN+R+YN+L+  +C  + + +A  ++ +M+  
Sbjct: 401 LMDGHCLRSEMDEAVKVFDTMVHKGCV-PNVRSYNILINGYCQIQRMDKAMGLLEQMSLQ 459

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+  D VTYNT+       G    A  +  EM  +G  P+  T  I++   CK   + EA
Sbjct: 460 GLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEA 519

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           +   + ++   +  +++++N+ I G     + +   ++ + +    + PDV TY+ +++ 
Sbjct: 520 MVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHG 579

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G +D+  ++F  M + G   D   Y+ + +G++R  E   A +LL  M+  GF  +
Sbjct: 580 LCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSAD 639

Query: 423 VVIFTTIISGWCSDGSMDRAIE 444
           V   TT+I    SD  +D++ E
Sbjct: 640 VST-TTLIVEMLSDDGLDQSFE 660


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 208/475 (43%), Gaps = 51/475 (10%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           F  +   G  P++VTY T++      KR +     +  +   G++P+ I FN +IN    
Sbjct: 6   FKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCR 65

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
            G ++E  +   +M   G  P   TYNTL+ GY   G   +++ L   M R G + PN+ 
Sbjct: 66  DGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNG-LSPNVV 124

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TY  L+ + C   N+  A     +M   G+ P+  TY TI   +AQ G  D+A  V+ EM
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
             +G  P+  T   +I+G+C  G+++EA+   + M   GV P++V ++ +I GF    + 
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244

Query: 335 DGVDEVLALMKEFRVNPDVITYS-----------------------------------TI 359
           D   ++   M    V PD +TYS                                   T+
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTL 304

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +NA+   G ++K   + D+M + G  PDA  Y++L  G  ++   ++A  LL+ +     
Sbjct: 305 INAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDS 364

Query: 420 HPNVVIFTTII---------------SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            P+ V + T+I                G+C  G MD A +VF+ M      PN   +  +
Sbjct: 365 IPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVI 424

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           + G+       +A ++ + M      P   T L L +A    G+  E   ++  I
Sbjct: 425 IHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDI 479



 Score =  118 bits (296), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 112/221 (50%)

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
            LRF + M+  G  PN+V +N +I G+ ++   D     L  M    + P++IT++ I+N
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                G + +  E+  +M + G  PD   Y+ L  GY +E    +A  L   M+ +G  P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           NVV +T++I+  C  G+++RA+E FD+M   G+ PN +T+ T++ G+++      A  +L
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             M   G  P   T+  L       G  +EA  +L  +  K
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGK 222



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 110/258 (42%), Gaps = 16/258 (6%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L+  L E+ +  EA  +F  ++     P   TYTTL+ A   +   N    +  ++
Sbjct: 265 TYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEM 324

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI--------- 184
            + G  PD++ +N +IN  ++    +EA     K+      P+  TYNTLI         
Sbjct: 325 IQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFK 384

Query: 185 ------KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
                 KG+ + G  +E+ ++ + M  + N KPN   YNV++   C   N+ +A+ +  +
Sbjct: 385 SAVALVKGFCMKGLMDEADQVFESMINK-NHKPNEAIYNVIIHGHCRIGNVLKAYKLYKE 443

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M      P  VT   +  A    G   +  EVI ++  +    +     +++    KEG 
Sbjct: 444 MVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCKLTDAELSKVLVEINQKEGN 503

Query: 299 IKEALRFARTMKEYGVHP 316
           +         M + G+ P
Sbjct: 504 MDMVFNLLTEMAKDGLIP 521


>gi|115447573|ref|NP_001047566.1| Os02g0644600 [Oryza sativa Japonica Group]
 gi|49387609|dbj|BAD25805.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|49388661|dbj|BAD25796.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113537097|dbj|BAF09480.1| Os02g0644600 [Oryza sativa Japonica Group]
          Length = 526

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 196/370 (52%), Gaps = 17/370 (4%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L+N    +G+ Q AQ +F  +++   +P +VTY  L +          +  ++ ++ +
Sbjct: 144 TCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMAD 203

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +G++P+S+ +   I  F   GN+ EA   F  ++E G+      Y++++ GY ++G  + 
Sbjct: 204 HGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDH 263

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  L   ++R+GN+  +    + L+   C   N+  A NV   M    + PDV++Y+ + 
Sbjct: 264 AYMLFVRVARQGNLVDHFSC-SKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLI 322

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           + Y QNG+ D+A     +M   G+  +     I+++GYCK G+++EA +    M   G+ 
Sbjct: 323 SIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIK 382

Query: 316 PNLVIFNLLIKGFVE----------------IMDRDGVDEVLALMKEFRVNPDVITYSTI 359
           P+++ + +L+ G ++                 + R   +++L+ MK+ ++ PDV  Y+ +
Sbjct: 383 PDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVL 442

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++    A ++ + +E+FD+M + G+ PDA+AY+ L  GY  + E  KAE+LL  MI+ G 
Sbjct: 443 IDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGI 502

Query: 420 HPNVVIFTTI 429
            P+ + F+ +
Sbjct: 503 EPDELTFSVL 512



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 212/451 (47%), Gaps = 20/451 (4%)

Query: 68  SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           +C  V  + +    L   G   E  A F    + G     V Y   +         N   
Sbjct: 69  NCHIVSYLLQCFRKL---GMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAV 125

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            ++++++  G+ PD I +  +IN +   G M+ A   F +M ++ + P   TYN L  G+
Sbjct: 126 KLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGF 185

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
             +G   E   LLD M+  G ++PN  TY + +  +C   N++EA  + + +   G+   
Sbjct: 186 CKSGLVMEVFDLLDRMADHG-LEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHI 244

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
            V Y+++   Y  +G  D A  + V +   G   +  +C  +I+  C+ G ++ A    +
Sbjct: 245 EVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCK 304

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M E+ V P+++ ++ LI  + +  D D        M +  ++ DVI Y+ +MN +  AG
Sbjct: 305 IMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAG 364

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE----------------ELL 411
            + +  ++F  M   GIKPD  AY++L  G+++E   +  E                +LL
Sbjct: 365 RLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLL 424

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
            +M +    P+V  +T +I G C    +  A E+FD+M + G++P+   +  L+ GY   
Sbjct: 425 SSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQ 484

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            +  +AE++LQ M   G+ P + TF +L ++
Sbjct: 485 GEISKAEDLLQEMIDKGIEPDELTFSVLNQS 515



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/444 (22%), Positives = 202/444 (45%), Gaps = 23/444 (5%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           + Y  ++  L  + R +    ++      G +PD   ++ +I ++ + GN+ +A+D +  
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M   G+       + L++ +   G   E +    L  ++  +  +   YN+ +  +C   
Sbjct: 61  MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYF-LKFKDSGLHLDKVIYNIAMDTYCKNG 119

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           N+ EA  ++++M   G+ PD + Y  +   Y   GE   A++V  EM    ++P+  T  
Sbjct: 120 NMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYN 179

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           I+ SG+CK G + E       M ++G+ PN + + + I GF    +    + +  +++E 
Sbjct: 180 ILASGFCKSGLVMEVFDLLDRMADHGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEK 239

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            ++   + YS+++  +  +G+ D    +F  + + G   D  + S L     R    + A
Sbjct: 240 GIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGA 299

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +   M+E    P+V+ ++ +IS +C +G MD+A   F  M + G+S ++  +  LM G
Sbjct: 300 SNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNG 359

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLL----------------AEARRATGLTKE 511
           Y +A +   A ++   M   G+ P    + +L                A+ RR+  L   
Sbjct: 360 YCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRAN 419

Query: 512 AKRILSKIKNKERTNEMEAEEDIP 535
             ++LS +K      +M+ E D+P
Sbjct: 420 HNKLLSSMK------DMQIEPDVP 437


>gi|357517409|ref|XP_003628993.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523015|gb|AET03469.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 819

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 227/483 (46%), Gaps = 35/483 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L + G+ +EA      ++E    PSLVTY  L+  L   ++F+  +S++ 
Sbjct: 276 VVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLV 335

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  P+   FNA+I+ +S  GNM++A+     M   GL P   T+NTL++G+    
Sbjct: 336 EMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTN 395

Query: 192 KPEESVKLLD-------------------LMSREG---------------NVKPNLRTYN 217
           + E++ ++L+                   L+ +                 N+K N     
Sbjct: 396 QMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLT 455

Query: 218 VLVRAWCNEKNITEAWNVMHKMA-ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           +LV   C      EA ++  ++A   G+  +  T N +     + G  ++   V  EM  
Sbjct: 456 LLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVE 515

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G+  +G +   +I G CK GKI+EA +    M + G  P+   +N L+KG  +    D 
Sbjct: 516 RGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDD 575

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
           V  VL   K+  V P++ TY+ ++  +  A  +D    +F+ +    ++     Y+IL  
Sbjct: 576 VGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIA 635

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
            + +     +A +L   M  S  HP +  +++II G C +  ++ A  +F++M   G+ P
Sbjct: 636 AHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMP 695

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N+  +  L+ GY +  Q  + E ILQ M +  + P K T+ ++ +     G TKEA ++L
Sbjct: 696 NVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLL 755

Query: 517 SKI 519
           +++
Sbjct: 756 NEM 758



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/488 (22%), Positives = 227/488 (46%), Gaps = 37/488 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +++S   LM+SL++  +  ++  +F+ +  GG    + TY T + A     + +    + 
Sbjct: 205 SLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAVGLF 264

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ E G+ P+ + +N +I+   +SG +EEA+    +M E+ + P+  TY  L+ G    
Sbjct: 265 LKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKF 324

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K +E+  +L  M  +G   PN   +N L+  +  + N+ +A  V   M   G+KP+ VT
Sbjct: 325 EKFDEANSVLVEMYSKG-FSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVT 383

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +NT+   + +  + +QAE+V+  +  N +  N   C  ++   CK  K   AL+  + + 
Sbjct: 384 HNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKALL 443

Query: 311 EYGVHPNLVIFNLLIKGFVE---------------------------------IMDRDGV 337
              +  N  +  LL+ G  +                                 + +R  +
Sbjct: 444 LRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNM 503

Query: 338 DEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           +EV  + KE     +  D I+Y+T++     +G +++  ++ + M K G KPD + Y+ L
Sbjct: 504 EEVFPVCKEMVERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFL 563

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            KG   + + +    +L    + G  PN+  +  ++ G+C+   +D A+ +F+K+  + V
Sbjct: 564 MKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKV 623

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
             +   +  L+  +S+A     A ++   M++  +HP   T+  +        L +EAK 
Sbjct: 624 ELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKG 683

Query: 515 ILSKIKNK 522
           I  +++N+
Sbjct: 684 IFEEMRNE 691



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 176/371 (47%), Gaps = 5/371 (1%)

Query: 113 LLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES- 171
           +L  L    +F+S   I+  +    +  +      ++    + G   EA+D ++++ +  
Sbjct: 422 VLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDLWFRLADKK 481

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE 231
           GL   T+T N L+ G    G  EE   +   M   G V   + +YN L+   C    I E
Sbjct: 482 GLAANTTTSNALLYGLCERGNMEEVFPVCKEMVERGLVLDGI-SYNTLIFGCCKSGKIEE 540

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           A+ +  KM   G KPD  TYN +    A  G+ D    V+ E + +GV PN  T  +++ 
Sbjct: 541 AFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDVGRVLHEAKDHGVVPNIYTYALMLE 600

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
           GYC   +I  A+     +    V  + V++N+LI    +  +     ++   M+   ++P
Sbjct: 601 GYCNADRIDNAVSLFNKLVYNKVELSYVVYNILIAAHSKAGNFTEAFKLRDAMRSSNIHP 660

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
            + TYS+I++       +++ K IF++M   G+ P+   Y+ L  GY +  + ++ E +L
Sbjct: 661 TIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESIL 720

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M  +   PN + +T +I G+C  G+   A ++ ++M  +G+SP+  T+  L  GY + 
Sbjct: 721 QEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKE 780

Query: 472 RQPWRAEEILQ 482
            +    EE LQ
Sbjct: 781 NE---LEETLQ 788



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 96/358 (26%), Positives = 174/358 (48%), Gaps = 11/358 (3%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEG-GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +T L+  L + GK  EA  ++  L +  G   +  T   LL  L  +     +  +  ++
Sbjct: 454 LTLLVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEM 513

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E G+  D I +N +I    +SG +EEA     KM + G  P T TYN L+KG    GK 
Sbjct: 514 VERGLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKM 573

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++  ++L   +++  V PN+ TY +++  +CN   I  A ++ +K+  + ++   V YN 
Sbjct: 574 DDVGRVLH-EAKDHGVVPNIYTYALMLEGYCNADRIDNAVSLFNKLVYNKVELSYVVYNI 632

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A+++ G   +A ++   M  + + P   T   II G C    ++EA      M+  G
Sbjct: 633 LIAAHSKAGNFTEAFKLRDAMRSSNIHPTIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEG 692

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + PN+  +  LI G+ ++   D ++ +L  M    + P+ ITY+ +++ +   G   +  
Sbjct: 693 LMPNVFCYTALIGGYCKLGQMDQIESILQEMTSNCIQPNKITYTIMIDGYCKMGNTKEAT 752

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA---------EELLMTMIESGFHPN 422
           ++ ++M   GI PD   Y++L KGY +E E E+          EE+  T +    HP+
Sbjct: 753 KLLNEMIANGISPDTVTYTVLQKGYCKENELEETLQGDTAVPLEEITYTTLVDKLHPH 810



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 73/272 (26%), Positives = 135/272 (49%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V P+L++ N L+ +      + +++ V   M   G+  DV TY T   AY + G+ D+A 
Sbjct: 202 VFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAV 261

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            + ++M   GV PN  T   +I G CK G+++EAL F   M E  V+P+LV + +L+ G 
Sbjct: 262 GLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGL 321

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
           V+    D  + VL  M     +P+   ++ +++ +S  G MD    + DDM   G+KP+A
Sbjct: 322 VKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNA 381

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             ++ L +G+ R  + E+AE++L  ++ +    N    + ++   C     D A+++   
Sbjct: 382 VTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSYVLHLLCKSSKFDSALKIVKA 441

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           +    +  N      L+ G  +  +   A ++
Sbjct: 442 LLLRNIKVNDSLLTLLVCGLCKCGKHLEAIDL 473



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 112/489 (22%), Positives = 192/489 (39%), Gaps = 51/489 (10%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TVRS   L+  L+       A+     LIEG     L              R + I S  
Sbjct: 110 TVRSYCILIRLLLASNHIPRAKFTLKRLIEGNANTPLKK---------TDARLSEIASAF 160

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ E       +    + + F   G    A DTF      G+ P+  + N L+     +
Sbjct: 161 LELGERSHGELDLLIYILCSQFQHLG-FHWAFDTFMLFTSKGVFPSLKSCNFLMSSLVKS 219

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +  +S ++ D M R G V  ++ TY   + A+C    I EA  +  KM   G+ P+VVT
Sbjct: 220 NELHKSFRVFDAMCR-GGVLIDVYTYATAINAYCKGGKIDEAVGLFLKMGEGGVLPNVVT 278

Query: 251 YNTIATAYAQNGEA-----------------------------------DQAEEVIVEME 275
           YN +     ++G                                     D+A  V+VEM 
Sbjct: 279 YNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGLVKFEKFDEANSVLVEMY 338

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
             G  PN      +I GY ++G + +ALR    M   G+ PN V  N L++GF      +
Sbjct: 339 SKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNAVTHNTLLQGFCRTNQME 398

Query: 336 GVDEVL--ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
             ++VL   L     VN D  +Y  +++    +   D   +I   +    IK +    ++
Sbjct: 399 QAEQVLEYLLSNVLSVNEDACSY--VLHLLCKSSKFDSALKIVKALLLRNIKVNDSLLTL 456

Query: 394 LAKGYVREQEPEKAEELLMTMIE-SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           L  G  +  +  +A +L   + +  G   N      ++ G C  G+M+    V  +M E 
Sbjct: 457 LVCGLCKCGKHLEAIDLWFRLADKKGLAANTTTSNALLYGLCERGNMEEVFPVCKEMVER 516

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G+  +  ++ TL++G  ++ +   A ++ + M   G  P   T+  L +     G   + 
Sbjct: 517 GLVLDGISYNTLIFGCCKSGKIEEAFKLKEKMMKQGFKPDTYTYNFLMKGLADKGKMDDV 576

Query: 513 KRILSKIKN 521
            R+L + K+
Sbjct: 577 GRVLHEAKD 585



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 120/283 (42%), Gaps = 32/283 (11%)

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           V P + + + +M++   +  + K   +FD M + G+  D + Y+     Y +  + ++A 
Sbjct: 202 VFPSLKSCNFLMSSLVKSNELHKSFRVFDAMCRGGVLIDVYTYATAINAYCKGGKIDEAV 261

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            L + M E G  PNVV +  +I G C  G ++ A+    +M E+ V+P+L T+  L+ G 
Sbjct: 262 GLFLKMGEGGVLPNVVTYNNLIDGLCKSGRLEEALMFKGRMVENKVNPSLVTYGILVNGL 321

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE----- 523
            +  +   A  +L  M + G  P +  F  L +     G   +A R+   +  K      
Sbjct: 322 VKFEKFDEANSVLVEMYSKGFSPNEFVFNALIDGYSRKGNMDDALRVRDDMTLKGLKPNA 381

Query: 524 -----------RTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAA 572
                      RTN+ME  E +    L  +        SY  +L +  +  S +  SA  
Sbjct: 382 VTHNTLLQGFCRTNQMEQAEQVLEYLLSNVLSVNEDACSY--VLHL--LCKSSKFDSALK 437

Query: 573 LKKGRMLLRDA---DSSLECSWFATTSMYLSHSCKSGARLPII 612
           + K  +LLR+    DS L        ++ +   CK G  L  I
Sbjct: 438 IVKA-LLLRNIKVNDSLL--------TLLVCGLCKCGKHLEAI 471



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 67/128 (52%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ + + +++ +      +EA+ IF  +   G  P++  YT L+       + + I SI+
Sbjct: 661 TIFTYSSIIHGMCCNDLVEEAKGIFEEMRNEGLMPNVFCYTALIGGYCKLGQMDQIESIL 720

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  N + P+ I +  +I+ + + GN +EA     +M  +G++P T TY  L KGY   
Sbjct: 721 QEMTSNCIQPNKITYTIMIDGYCKMGNTKEATKLLNEMIANGISPDTVTYTVLQKGYCKE 780

Query: 191 GKPEESVK 198
            + EE+++
Sbjct: 781 NELEETLQ 788


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 217/437 (49%), Gaps = 13/437 (2%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           ++A+ +   +I     P+ VT+ T + A       +    ++ Q+ + G  PD I ++ +
Sbjct: 24  EQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTL 83

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           +N FSE G ++EA+     M      P T  YN  +KG  IAG+ EE  +L+  M R+ +
Sbjct: 84  VNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRK-D 139

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
             PN  T++ L+ + C  + +  A  V+ +M   G  PDVV+YNTI + ++    AD A 
Sbjct: 140 CPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDAL 199

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           +++  M     +P+  +   ++   CK  +  +A+     M +     N + FN+LI   
Sbjct: 200 KLLKSM---LCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSL 256

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +        EV  LM ++R  PD++TYS+++N +S  G  +   ++F  M     + D 
Sbjct: 257 CQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADI 313

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
            +Y+   KG       + A EL+  M+     PN V F  +IS  C  G ++RAI+V+++
Sbjct: 314 FSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQ 373

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M ++G++P++ T+  L+ GYSE     R ++ L+ +      P   ++  + +       
Sbjct: 374 MPKYGITPDIFTYNALINGYSEQG---RLDDALKFLSTMPCEPDTISYNSILKGLCRAER 430

Query: 509 TKEAKRILSKIKNKERT 525
            K+A+++++++  K  T
Sbjct: 431 WKDAEKLVTEMLRKNCT 447



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 90/387 (23%), Positives = 184/387 (47%), Gaps = 13/387 (3%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L+N   E G+  EA  + N ++    +P+ V Y   L  L I  R+  +  +++++  
Sbjct: 81  STLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVR 137

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
               P+   F+ +IN+  ++  +E A++   +M++ G  P   +YNT+I  +    + ++
Sbjct: 138 KDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADD 197

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++KLL  M      KP+  ++N +++  C  K   +A  ++ KM     + + +T+N + 
Sbjct: 198 ALKLLKSML----CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILI 253

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            +  QNG+   A EV   M      P+  T   +I+G+ ++G  + A    R+M      
Sbjct: 254 DSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMP---CR 310

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            ++  +N  +KG       D   E++A M      P+ +T++ ++++    G +++  ++
Sbjct: 311 ADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDV 370

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           ++ M K GI PD   Y+ L  GY  +   + A + L TM      P+ + + +I+ G C 
Sbjct: 371 YEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTM---PCEPDTISYNSILKGLCR 427

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFE 462
                 A ++  +M     +PN  TF+
Sbjct: 428 AERWKDAEKLVTEMLRKNCTPNEVTFK 454



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 140/304 (46%), Gaps = 6/304 (1%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V P+  TYN +++  C  K   +A  +M +M  +   P+ VT+ T   A+ QNG  D+A 
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           E++ +M   G  P+      +++G+ + G++ EAL+   TM      PN V +N  +KG 
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGL 119

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
                 + V E++A M      P+  T+ST++N+      ++   E+ + M K G  PD 
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 179

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
            +Y+ +   +  +   + A +LL +M+     P+ + F  ++   C       A+E+  K
Sbjct: 180 VSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAK 236

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M +     N  TF  L+    +  Q   A E+ ++M  +   P   T+  L       GL
Sbjct: 237 MLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGL 296

Query: 509 TKEA 512
            + A
Sbjct: 297 DEMA 300



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 73/328 (22%), Positives = 156/328 (47%), Gaps = 12/328 (3%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L+NSL +    + A  +   + + G+ P +V+Y T+++  + Q R +    ++  +
Sbjct: 146 TFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSM 205

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
                 PD+I FNAV+    ++    +A++   KM +        T+N LI      G+ 
Sbjct: 206 ---LCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQV 262

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE-AWNVMHKMAASGMKPDVVTYN 252
           ++++++ +LM +     P++ TY+ L+  + +E+ + E A+++   M     + D+ +YN
Sbjct: 263 KDAIEVFELMPKY-RCMPDIVTYSSLINGF-SEQGLDEMAFDLFRSMPC---RADIFSYN 317

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
                       D A E+I +M      PN  T  I+IS  C++G +  A+     M +Y
Sbjct: 318 ATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKY 377

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ P++  +N LI G+ E   +  +D+ L  +      PD I+Y++I+     A      
Sbjct: 378 GITPDIFTYNALINGYSE---QGRLDDALKFLSTMPCEPDTISYNSILKGLCRAERWKDA 434

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           +++  +M +    P+   +    + +++
Sbjct: 435 EKLVTEMLRKNCTPNEVTFKYANQLFIK 462



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 75/149 (50%), Gaps = 5/149 (3%)

Query: 69  CRT-VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           CR  + S    +  L    +  +A  +  +++     P+ VT+  L+++L  +   N   
Sbjct: 309 CRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAI 368

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            +  Q+ + G+ PD   +NA+IN +SE G +++A+     M      P T +YN+++KG 
Sbjct: 369 DVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP---CEPDTISYNSILKGL 425

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTY 216
             A + +++ KL+  M R+ N  PN  T+
Sbjct: 426 CRAERWKDAEKLVTEMLRK-NCTPNEVTF 453


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 226/468 (48%), Gaps = 6/468 (1%)

Query: 57  QTHCSFC--MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL 114
           + HC F   M +     +     ++  L +  +  +A++I   +++ G  P L TY+ ++
Sbjct: 208 KAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLII 267

Query: 115 AALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT 174
             L   K  +    ++ Q+ E G  P+SI +N++I+ +S SG   E++  F +M   G+ 
Sbjct: 268 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVI 327

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN--ITEA 232
           PT    N+ I      G+  E+  + D M  +G  KP++ +Y+ ++  +    +  + + 
Sbjct: 328 PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLADV 386

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
            N+ + M   G+ P+   +N +  AYA+ G  D+A  +  +M++ G+ P+  T   +IS 
Sbjct: 387 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 446

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
            C+ G++ +AL     M + GV P+  ++  LI+G     +     E+++ M    + P 
Sbjct: 447 LCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPP 506

Query: 353 VITY-STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
            + Y S+I+N     G + + K+I D M + G +P+   ++ L +GY      E+A  LL
Sbjct: 507 GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALL 566

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M   G  PN  I+ T++ G+C +G +D A+ VF  M   GV P    +  ++ G  +A
Sbjct: 567 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQA 626

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           R+   A+++   M   G      T+ ++         T EA  +L K+
Sbjct: 627 RRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 674



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 201/433 (46%), Gaps = 74/433 (17%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLA--ALTIQKRFNSIHS 128
           TV +    +++L + G+  EA+ IF++++  G KP +++Y+T+L   A         +H+
Sbjct: 329 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 388

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           I + +   G+ P+   FN +INA++  G M++AM  F  M+  G+ P T T+ T+I    
Sbjct: 389 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 448

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN----------------------- 225
             G+ ++++   + M   G V P+   Y  L++  CN                       
Sbjct: 449 RIGRLDDALHKFNHMVDIG-VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 507

Query: 226 -------------EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
                        E  + E  ++M  M  +G +P+VVT+N++   Y   G  ++A  ++ 
Sbjct: 508 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 567

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG----- 327
            M   G++PN    G ++ GYCK G+I +AL   R M   GV P  V++++++ G     
Sbjct: 568 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 627

Query: 328 --------FVEIMD-------------------RDGVDEVLALMKEF---RVNPDVITYS 357
                   F E+++                    +  DE   L+++     V  D+IT++
Sbjct: 628 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFN 687

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++A    G   + KE+FD +   G+ P+   YS++    ++E+  E+A+ L +++ +S
Sbjct: 688 IVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKS 747

Query: 418 GFHPNVVIFTTII 430
           G   +  +   I+
Sbjct: 748 GHASDSRLLNHIV 760



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 202/456 (44%), Gaps = 40/456 (8%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P++ TY  L+       R +   +I+ ++ +NG+ PD  F  ++I  F + G +++A   
Sbjct: 154 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDD-FSYSLIYGFVKDGEVDKAHCL 212

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F +M E G+ P     N++IK      + +++  ++  M   G + P+L TY++++   C
Sbjct: 213 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG-IAPDLFTYSLIIDGLC 271

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
             K + +A  V+ +M  +G +P+ +TYN++   Y+ +G  +++  V  +M   GV P   
Sbjct: 272 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 331

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR--DGVDEVLA 342
            C   I    K G+  EA     +M   G  P+++ ++ ++ G+    D     V  +  
Sbjct: 332 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 391

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA-------------- 388
           LM    + P+   ++ ++NA++  G MDK   IF+DM   G+ PD               
Sbjct: 392 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 451

Query: 389 ---------------------HAYSILAKGYVREQEPEKAEELLMTMIESGFHP-NVVIF 426
                                  Y  L +G     E  KA+EL+  M+     P  V  F
Sbjct: 452 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 511

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           ++II+  C +G +    ++ D M + G  PN+ TF +LM GY        A  +L  M +
Sbjct: 512 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 571

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            G+ P    +  L +     G   +A  +   + +K
Sbjct: 572 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 607



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 99/223 (44%), Gaps = 1/223 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   + G+  +A  +F +++  G KP+ V Y+ +L  L   +R  +   +  ++ E+G
Sbjct: 584 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 643

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
                  +  V+     +   +EA     K+    +     T+N +I      G+ +E+ 
Sbjct: 644 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 703

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L D +S  G V PN++TY++++     E++  EA N+   +  SG   D    N I   
Sbjct: 704 ELFDAISTYGLV-PNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 762

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
                E  +A   +  +  N +     T  ++ S + +EG IK
Sbjct: 763 LLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIK 805


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 122/461 (26%), Positives = 230/461 (49%), Gaps = 33/461 (7%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD--PDSIFFN 146
           ++A+ +F+ L+  G  P + +Y  LL  L  + R      ++  + ++G D  PD + ++
Sbjct: 34  EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            VIN F + G+++       KM +  ++P   TYN++I     A   ++++++L  M + 
Sbjct: 93  TVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G V P+  TYN +V  +C+     EA   + KM + G++PDVVTYN++     +NG   +
Sbjct: 146 G-VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 204

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A ++   M   G++P+  T G ++ GY  +G + E       M   G+HPN  +F++L+ 
Sbjct: 205 ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 264

Query: 327 GFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
            + +   ++ V+E + +  + R   +NP+ +TY T+++    +G ++     F+ M   G
Sbjct: 265 AYAK---QEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           ++PD+  Y+ L        + EKAEEL + M++ G   + + F +II   C +G +  + 
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESG 381

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF---GVHPQKSTFLLLA 500
           ++FD M   GV P++ T               R +E   +  AF   G+ P   T+ L+A
Sbjct: 382 KLFDLMVRIGVKPDIITL-------------GRNDEAKDLFVAFSSNGLVPNYWTYRLMA 428

Query: 501 EARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLER 541
           E     GL +E  ++   +++   T +      I  E L+R
Sbjct: 429 ENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQR 469



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/367 (23%), Positives = 161/367 (43%), Gaps = 55/367 (14%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM+ L + G+  EA+ IF+++ + G KP + TY TLL     +     +H ++ 
Sbjct: 186 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLD 245

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  NG+ P+   F+ ++ A+++   +EEAM  F KM++ GL P   TY T+I     +G
Sbjct: 246 LMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSG 305

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E+++   + M  EG ++P+   YN L+ + C    I + W                  
Sbjct: 306 RVEDAMLYFEQMIDEG-LRPDSIVYNSLIHSLC----IFDKW------------------ 342

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
                        ++AEE+ +EM   G+  +      II  +CKEG++ E+ +    M  
Sbjct: 343 -------------EKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVR 389

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGF 368
            GV P+++            + R+  DE   L   F  N   P+  TY  +       G 
Sbjct: 390 IGVKPDII-----------TLGRN--DEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGL 436

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH---PNVVI 425
           +++  ++F  M   G   D+   + + +  ++  E  +A   L  + E  F        +
Sbjct: 437 LEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASL 496

Query: 426 FTTIISG 432
           F  ++SG
Sbjct: 497 FIDLLSG 503


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 205/399 (51%), Gaps = 10/399 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIM 130
           VR +T LM  L  +G+  EA ++ +  ++ G +   V Y T++  L  I K  ++I  + 
Sbjct: 140 VRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQ-MF 198

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++++  + P+ I +N VI+   + G ++EA     +M E+G+     +YN++I G+   
Sbjct: 199 PKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSV 258

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ + +VKLLD M   G V P++ T+N+L+   C    ++EA+NV+  M   G KPD+V+
Sbjct: 259 GRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVS 318

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +   Y  +G   +A++V  +M      PN  +   +I+GYCK   + EA+     M 
Sbjct: 319 YNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMH 378

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVD----EVLALMKEFRVNPDVITYSTIMNAWSTA 366
              + P+ V +N L+ G    + + G      +++  M+      D+ITY+ +++ +   
Sbjct: 379 NKNLVPDTVTYNCLLDG----LSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKH 434

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
              DK   +F  + + GI P+   Y+IL  G  +    + A+E+   +   G  PN+  +
Sbjct: 435 EKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTY 494

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
             +I G C +G +D A  +  KM  +   PN  TF+T++
Sbjct: 495 NIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIV 533



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 203/427 (47%), Gaps = 8/427 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L+N+  + G+   A ++  N+++ G +  +   TTL+  L ++ R     S++ + 
Sbjct: 107 TFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEY 166

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            + G   D + +  +IN   + G   +A+  F KMK+  + P    YNT+I G    G  
Sbjct: 167 VDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLV 226

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-MKPDVVTYN 252
           +E+  L   M   G ++ ++ +YN ++  +C+      A  ++ +M   G + PDV T+N
Sbjct: 227 DEACGLCTEMVENG-IELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFN 285

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +     + G   +A  V+  M   G +P+  +   +++GYC  G + EA +    M E 
Sbjct: 286 ILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVER 345

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFM 369
              PN++ +  LI G+ ++     VDE + L+ E     + PD +TY+ +++  S +G  
Sbjct: 346 TALPNVISYCTLINGYCKV---RMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRS 402

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
               ++ + M  +G   D   Y++L   Y + ++ +KA  L   +IE G  PN+  +  +
Sbjct: 403 LYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNIL 462

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G C  G +  A E+F  +   G  PN++T+  ++ G  +      AE +L  M     
Sbjct: 463 LDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNY 522

Query: 490 HPQKSTF 496
            P   TF
Sbjct: 523 LPNYITF 529



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/447 (24%), Positives = 210/447 (46%), Gaps = 3/447 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNL-IEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           KL+++LI+  +     +++  L  +   KPSL+T++ L+ A     +     S++  + +
Sbjct: 74  KLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNILK 133

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G   D      ++      G + EA+    +  + G       Y T+I G    GK  +
Sbjct: 134 MGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRD 193

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++++   M ++  V PNL  YN ++   C +  + EA  +  +M  +G++ DV +YN++ 
Sbjct: 194 AIQMFPKM-KKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSMI 252

Query: 256 TAYAQNGEADQAEEVIVEMEHNG-VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             +   G    A +++ EM   G V P+  T  I+I G CK G++ EA      M + G 
Sbjct: 253 HGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGW 312

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P++V +N L+ G+          +V   M E    P+VI+Y T++N +     +D+   
Sbjct: 313 KPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAMV 372

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +  +M    + PD   Y+ L  G  +        +L+  M  SG   +++ +  ++  + 
Sbjct: 373 LLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDYF 432

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
                D+A+ +F  + E G+SPN++T+  L+ G  ++ +   A+EI Q++ A G  P   
Sbjct: 433 KHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIR 492

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKN 521
           T+ ++       G   EA+ +L K+ N
Sbjct: 493 TYNIMIHGLCKEGFLDEAEALLYKMVN 519



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 144/292 (49%), Gaps = 2/292 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           V S   +++     G+ Q A  + + ++  G   P + T+  L+  L    R +  ++++
Sbjct: 245 VYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVV 304

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + + + G  PD + +NA++N +  SG++ EA   F KM E    P   +Y TLI GY   
Sbjct: 305 AVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKV 364

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              +E++ LL  M  + N+ P+  TYN L+            W+++  M ASG   D++T
Sbjct: 365 RMVDEAMVLLTEMHNK-NLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLIT 423

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +   Y ++ + D+A  +   +   G+ PN RT  I++ G CK G++K A    + + 
Sbjct: 424 YNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLKYAKEIFQLLS 483

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
             G  PN+  +N++I G  +    D  + +L  M      P+ IT+ TI+ A
Sbjct: 484 AKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIVRA 535



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 120/258 (46%), Gaps = 1/258 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L + G+  EA  +   +I+ G KP +V+Y  L+    +         +  
Sbjct: 281 VYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFD 340

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E    P+ I +  +IN + +   ++EAM    +M    L P T TYN L+ G   +G
Sbjct: 341 KMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSG 400

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +      L++ M   G    +L TYNVL+  +   +   +A  +   +   G+ P++ TY
Sbjct: 401 RSLYEWDLVEAMRASGQ-PADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTY 459

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     ++G    A+E+   +   G QPN RT  I+I G CKEG + EA      M  
Sbjct: 460 NILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVN 519

Query: 312 YGVHPNLVIFNLLIKGFV 329
               PN + F+ +++  +
Sbjct: 520 NNYLPNYITFDTIVRAIL 537


>gi|218197339|gb|EEC79766.1| hypothetical protein OsI_21159 [Oryza sativa Indica Group]
          Length = 410

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/359 (31%), Positives = 186/359 (51%), Gaps = 3/359 (0%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           A++N   + G++ EA   F +M   GL P   TY  L+ GY   G+ E+   L + M R 
Sbjct: 43  ALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEM-RR 101

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G V+PNL TYN L+  WC       A ++  +M   G+  +VV+YNT+     ++G+   
Sbjct: 102 GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD 161

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A +++  M   G +P+  T  +++ GY K GK+  AL F   MK  G  P+ V +N+LI 
Sbjct: 162 AAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIA 221

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GF    D    +  L+ MKE  + P  +TY+ ++++++    M K  EI   M KAG++ 
Sbjct: 222 GFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEV 281

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           DAH Y +L +    E   + A +L  +M E G  P+ VI+  +I G+  +GS  +A+++ 
Sbjct: 282 DAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLI 341

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF--LLLAEAR 503
            +M + G+ PN  ++   +    +  +   AE +L  M   G+   +S    LL A+AR
Sbjct: 342 MEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALLDAKAR 400



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 168/357 (47%), Gaps = 10/357 (2%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESG-----LTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           A +     +G++  A+    +  +SG     +T  T+  N   KG    G   E+ ++ D
Sbjct: 7   AAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKG----GDVAEARRVFD 62

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M   G + PN  TY  L+  +       + + +  +M   G++P++ TYN +   + + 
Sbjct: 63  EMPLLG-LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRT 121

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           GE ++A  +  EM   G+  N  +   +I+G C+ GK+ +A +    M+  G  P+++ F
Sbjct: 122 GEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITF 181

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           NLL+ G+ +             MK     P  +TY+ ++  +  A  M +      DM +
Sbjct: 182 NLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKE 241

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G++P    Y+IL   + RE    KA E+L  M ++G   +   +  ++   C +G+M  
Sbjct: 242 RGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKD 301

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           A ++F  M E GV P+   ++ +++GY      ++A +++  M+  G+ P  +++ L
Sbjct: 302 ARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGL 358



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 173/359 (48%), Gaps = 1/359 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+N   + G   EA+ +F+ +   G  P+ VTYT L+       +     ++  
Sbjct: 38  VTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFE 97

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G++P+   +N +I  +  +G  E A   F +M   G+     +YNTLI G    G
Sbjct: 98  EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHG 157

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  ++ KLLD+M  EG  +P++ T+N+LV  +     ++ A    ++M A+G +P  VTY
Sbjct: 158 KLWDAAKLLDMMRTEGT-RPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   + +  +  +A   + +M+  G++P   T  I+I  + +E  + +A      M++
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  +   + +L++      +     ++   M E  V P  + Y  ++  +   G   K
Sbjct: 277 AGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYK 336

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             ++  +M + G+ P++ +Y +  +   ++ + ++AE LL  M+ +G   +  I   ++
Sbjct: 337 ALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMVRAGLQTSESICQALL 395



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R V S   L+  L   GK  +A  + + +   G +PS++T+  L+       + ++    
Sbjct: 141 RNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPF 200

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
            +Q++  G  P ++ +N +I  F  + +M  A      MKE GL PT  TY  LI  +  
Sbjct: 201 FNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFAR 260

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
                ++ ++L  M + G ++ +  TY VLVRA C E N+ +A  +   M   G++P  V
Sbjct: 261 ENHMGKAFEILAGMEKAG-LEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNV 319

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y+ +   Y + G + +A ++I+EM   G+ PN  + G+ I   CK+ K +EA      M
Sbjct: 320 IYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379

Query: 310 KEYGVHPNLVIFNLLI 325
              G+  +  I   L+
Sbjct: 380 VRAGLQTSESICQALL 395



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 6/220 (2%)

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
           C  +++G CK G + EA R    M   G+ PN V +  L+ G+     R   ++  AL +
Sbjct: 41  CTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQR---EKGFALFE 97

Query: 346 EFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
           E R   V P++ TY+ ++  W   G  ++ + +FD+M   GI  +  +Y+ L  G  R  
Sbjct: 98  EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHG 157

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           +   A +LL  M   G  P+++ F  ++ G+   G M  A+  F++M   G  P+  T+ 
Sbjct: 158 KLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYN 217

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            L+ G+  AR   RA   L  MK  G+ P K T+ +L ++
Sbjct: 218 MLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDS 257



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 130/304 (42%), Gaps = 1/304 (0%)

Query: 220 VRAWCNEKNITEAWNVMHKMAASG-MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           VR  C   ++  A  ++ +   SG    DV     +     + G+  +A  V  EM   G
Sbjct: 9   VRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLG 68

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           + PN  T   ++ GY   G+ ++       M+  GV PNL  +N LI  +    + +   
Sbjct: 69  LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERAR 128

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            +   M    +  +V++Y+T++      G +    ++ D M   G +P    +++L  GY
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY 188

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +  +   A      M  +GF P+ V +  +I+G+C    M RA      M E G+ P  
Sbjct: 189 GKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTK 248

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+  L+  ++      +A EIL  M+  G+     T+ +L  A    G  K+A+++   
Sbjct: 249 VTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQS 308

Query: 519 IKNK 522
           +  K
Sbjct: 309 MGEK 312


>gi|147797621|emb|CAN62945.1| hypothetical protein VITISV_002230 [Vitis vinifera]
          Length = 912

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 201/383 (52%), Gaps = 12/383 (3%)

Query: 67  ESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNS 125
           ES R + S   ++   ++  +   A+A+F+ ++ EG  KP + TYTT++       +   
Sbjct: 212 ESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYC---KMGM 268

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES-GLTPTTSTYNTLI 184
           I +  +  +E G  P+ + +N +IN F + G ME AM    +M E+    P T TY TLI
Sbjct: 269 IENAKNVFDEMGCKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLI 328

Query: 185 KGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
            GY   G+ EE++K + +++SR  N +PN+ TYN ++   C   N+ EA  +M +M  +G
Sbjct: 329 DGYCKRGELEEAMKYMEEMVSR--NCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNG 386

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           +K +V T+ +I       G+ D A   + EM   G++ + +  G++++ YCK GK  +A+
Sbjct: 387 LKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAI 446

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
              + MK  G++P++  FN + +  VE    D    +L  MK+    P+ ++YST+++  
Sbjct: 447 SLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGL 506

Query: 364 STA-GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
             A G M + +E  DDM + G   DA  YS L KGY  +   + A  L   M++ G+  N
Sbjct: 507 CKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVIN 566

Query: 423 VVIFTTIISGWCSDGSMDRAIEV 445
           +  F   + G     + ++A EV
Sbjct: 567 LESFLAFVKGL---SAKEKAFEV 586



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 193/410 (47%), Gaps = 5/410 (1%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           K + +  +RG  + A   F+   +      L +Y  +L       R     ++  Q+ + 
Sbjct: 187 KFVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKE 246

Query: 137 GM-DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           G+  PD   +  +I  + + G +E A + F    E G  P   TYNT+I G+   G  E 
Sbjct: 247 GVVKPDVSTYTTIIRGYCKMGMIENAKNVF---DEMGCKPNLVTYNTMINGFCKKGLMES 303

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++K++D M+   +  P+  TY  L+  +C    + EA   M +M +   +P+V+TYN I 
Sbjct: 304 AMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAII 363

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
                NG  D+A+ ++  M  NG++ N  T   I+ G C  GK+ +A R  + M   G+ 
Sbjct: 364 YGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGME 423

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            +   + +++  + +I   D    +L  MK   +NP V +++ +      +G  DK   I
Sbjct: 424 ADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLI 483

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQ-EPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
              M + G  P+  +YS +  G  + +    + EE +  M  +G H +  +++ ++ G+C
Sbjct: 484 LRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGYC 543

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            DG+ D A+ +F +M + G   NL++F   + G S   + +  E+  + M
Sbjct: 544 EDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAKEKAFEVEKFFEEM 593



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 179/376 (47%), Gaps = 11/376 (2%)

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           + A+ + G++  A+  F + K+        +YN ++  +  A +   +  + D + +EG 
Sbjct: 189 VKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEGV 248

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           VKP++ TY  ++R +C    I  A NV  +M   G KP++VTYNT+   + + G  + A 
Sbjct: 249 VKPDVSTYTTIIRGYCKMGMIENAKNVFDEM---GCKPNLVTYNTMINGFCKKGLMESAM 305

Query: 269 EVIVEM-EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
           +++ +M E     P+  T   +I GYCK G+++EA+++   M      PN++ +N +I G
Sbjct: 306 KIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIYG 365

Query: 328 FVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
                    VDE   +M   R+N    +V T+++I+      G +D       +M   G+
Sbjct: 366 LCL---NGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGM 422

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           + DA AY ++   Y +  + + A  LL  M   G +P+V  F  +       G  D+A  
Sbjct: 423 EADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGL 482

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEAR-QPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           +  +M + G +PN  ++ T++ G  +A+ +    EE +  M   G H   S +  L +  
Sbjct: 483 ILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASMYSWLVKGY 542

Query: 504 RATGLTKEAKRILSKI 519
              G    A R+  ++
Sbjct: 543 CEDGNADMAMRLFCEM 558



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 167/381 (43%), Gaps = 7/381 (1%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
           +NA++  F ++  +  A   F ++ KE  + P  STY T+I+GY   G  E +  + D M
Sbjct: 220 YNAILGVFVKANRIMLARAVFDQIVKEGVVKPDVSTYTTIIRGYCKMGMIENAKNVFDEM 279

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYNTIATAYAQNG 262
                 KPNL TYN ++  +C +  +  A  ++ +M  +    PD VTY T+   Y + G
Sbjct: 280 G----CKPNLVTYNTMINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRG 335

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
           E ++A + + EM     +PN  T   II G C  G + EA R    M+  G+  N+    
Sbjct: 336 ELEEAMKYMEEMVSRNCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHT 395

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            ++KG   +   D     L  M    +  D   Y  ++N +   G  D    +  +M   
Sbjct: 396 SILKGLCVVGKLDDAARHLKEMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSR 455

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC-SDGSMDR 441
           GI P   +++ + +  V   + +KA  +L  M + G  PN + ++T+I G C + G M  
Sbjct: 456 GINPSVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHE 515

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
             E  D MC +G   +   +  L+ GY E      A  +   M   G      +FL   +
Sbjct: 516 VEEFVDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVK 575

Query: 502 ARRATGLTKEAKRILSKIKNK 522
              A     E ++   ++  +
Sbjct: 576 GLSAKEKAFEVEKFFEEMSRR 596



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/316 (22%), Positives = 152/316 (48%), Gaps = 3/316 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           ++N   ++G  + A  I + + E     P  VTYTTL+     +         M ++   
Sbjct: 291 MINGFCKKGLMESAMKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSR 350

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
             +P+ + +NA+I     +GN++EA     +M+ +GL    +T+ +++KG  + GK +++
Sbjct: 351 NCEPNVLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDA 410

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            + L  M   G ++ + + Y V+V  +C      +A +++ +M + G+ P V ++N +  
Sbjct: 411 ARHLKEMVGLG-MEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFR 469

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK-EGKIKEALRFARTMKEYGVH 315
              ++G+ D+A  ++ +M+  G  PN  +   +I G CK +G++ E   F   M   G H
Sbjct: 470 ILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHH 529

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            +  +++ L+KG+ E  + D    +   M +     ++ ++   +   S      + ++ 
Sbjct: 530 LDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAKEKAFEVEKF 589

Query: 376 FDDMGKAGIKPDAHAY 391
           F++M +     D H Y
Sbjct: 590 FEEMSRRCPGIDIHKY 605



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 141/304 (46%), Gaps = 5/304 (1%)

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
            V+A+ +  +I  A +  H+         + +YN I   + +      A  V  ++   G
Sbjct: 188 FVKAYGDRGDIRGAIHWFHRAKKMESGRCLFSYNAILGVFVKANRIMLARAVFDQIVKEG 247

Query: 279 V-QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           V +P+  T   II GYCK G I+ A        E G  PNLV +N +I GF +    +  
Sbjct: 248 VVKPDVSTYTTIIRGYCKMGMIENA---KNVFDEMGCKPNLVTYNTMINGFCKKGLMESA 304

Query: 338 DEVLALMKEFR-VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            +++  M E     PD +TY+T+++ +   G +++  +  ++M     +P+   Y+ +  
Sbjct: 305 MKIVDQMTETEDCMPDTVTYTTLIDGYCKRGELEEAMKYMEEMVSRNCEPNVLTYNAIIY 364

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G       ++A+ ++  M  +G   NV   T+I+ G C  G +D A     +M   G+  
Sbjct: 365 GLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLKEMVGLGMEA 424

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           + K +  ++  Y +  +   A  +L+ MK+ G++P  S+F  +      +G T +A  IL
Sbjct: 425 DAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESGKTDKAGLIL 484

Query: 517 SKIK 520
            ++K
Sbjct: 485 RQMK 488



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 108/239 (45%), Gaps = 2/239 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++  L   G   EA+ +   +   G K ++ T+T++L  L +  + +     + 
Sbjct: 356 VLTYNAIIYGLCLNGNVDEAKRMMTRMRLNGLKDNVATHTSILKGLCVVGKLDDAARHLK 415

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   GM+ D+  +  V+N + + G  ++A+    +MK  G+ P+ S++N + +    +G
Sbjct: 416 EMVGLGMEADAKAYGVVVNEYCKIGKADDAISLLKEMKSRGINPSVSSFNAVFRILVESG 475

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN-ITEAWNVMHKMAASGMKPDVVT 250
           K +++  +L  M + G   PN  +Y+ ++   C  K  + E    +  M  +G   D   
Sbjct: 476 KTDKAGLILRQMKQLG-CTPNFLSYSTVIDGLCKAKGRMHEVEEFVDDMCRNGHHLDASM 534

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           Y+ +   Y ++G AD A  +  EM   G   N  +    + G   + K  E  +F   M
Sbjct: 535 YSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSAKEKAFEVEKFFEEM 593



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 63/137 (45%), Gaps = 1/137 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK-RFNSIHSI 129
           +V S   +   L+E GK  +A  I   + + G  P+ ++Y+T++  L   K R + +   
Sbjct: 460 SVSSFNAVFRILVESGKTDKAGLILRQMKQLGCTPNFLSYSTVIDGLCKAKGRMHEVEEF 519

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           +  +  NG   D+  ++ ++  + E GN + AM  F +M + G      ++   +KG   
Sbjct: 520 VDDMCRNGHHLDASMYSWLVKGYCEDGNADMAMRLFCEMLDMGYVINLESFLAFVKGLSA 579

Query: 190 AGKPEESVKLLDLMSRE 206
             K  E  K  + MSR 
Sbjct: 580 KEKAFEVEKFFEEMSRR 596


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 206/414 (49%), Gaps = 25/414 (6%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L N L    +  E  A    ++  G+ P +VTY TL+  L        +H I    
Sbjct: 12  TLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLC------RVHRI---- 61

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
                   S+    +I+   + G+ +EA + F +MK  G+ P   +Y++L+ G+  AGK 
Sbjct: 62  --------SVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKL 113

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           EES +L + M  +G V+PNL  +NVL+   C E  + EA  ++      G+  D+VTYN+
Sbjct: 114 EESKRLFNEMVDQG-VQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNS 172

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + + G+   A ++ + M   G + N  +  I+I+GYCK  K++EA+     M + G
Sbjct: 173 LIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVG 232

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             PN+  ++ L+ G ++       +++  +MK   ++ D   Y   ++     G + +  
Sbjct: 233 KRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAM 292

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+F+++     K D  +YS L  G  +  + E A E    + + G  PNVV    +I G+
Sbjct: 293 ELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGF 352

Query: 434 CSDGSMDRA---IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           C    +D+A    E  +KM E+G +P++ T+ TL+ G+ E+    + EE++ ++
Sbjct: 353 CRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESN---KLEEVVNLL 403



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 84/359 (23%), Positives = 162/359 (45%), Gaps = 19/359 (5%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G+ PD    N + N       + E +     +   G  P   TYNTLIKG          
Sbjct: 5   GLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKG---------- 54

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
                 + R   +        +++   C   +  EA  +  +M A GM P+V++Y+++  
Sbjct: 55  ------LCRVHRISV---ATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVH 105

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            +   G+ ++++ +  EM   GVQPN     ++I   CKEGK+ EA +      + G+  
Sbjct: 106 GFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIIL 165

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +LV +N LI GF +I D     ++   M       + I+Y+ ++N +     +++   ++
Sbjct: 166 DLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLY 225

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M + G +P+   YS L  G ++  +   A +L   M  SG   +  I+   + G C +
Sbjct: 226 NEMPQVGKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKN 285

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           G +  A+E+F+++  +    + +++  L+ G  +A +   A E  + +   G+ P   T
Sbjct: 286 GVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVT 344



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 154/313 (49%), Gaps = 4/313 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + L++     GK +E++ +FN +++ G +P+LV +  L+  L  + +      ++ 
Sbjct: 97  VISYSSLVHGFCCAGKLEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLE 156

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
              + G+  D + +N++I+ F + G++  A   F  M   G      +Y  LI GY    
Sbjct: 157 VTIQRGIILDLVTYNSLIDGFCKIGDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIW 216

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K EE++ L + M + G  +PN++TY+ L+        + +A  +   M ASG+  D   Y
Sbjct: 217 KVEEAMNLYNEMPQVGK-RPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIY 275

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
                   +NG   +A E+  E++    + +  +   +I G CK GK++ A  F + + +
Sbjct: 276 VIFLDGLCKNGVLFEAMELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQ 335

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVD---EVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
            G+ PN+V  N++I GF  +   D  +   E +  M+E    PD+ITY+T++  +  +  
Sbjct: 336 EGLQPNVVTCNIMIHGFCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNK 395

Query: 369 MDKCKEIFDDMGK 381
           +++   +   M K
Sbjct: 396 LEEVVNLLHKMFK 408



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 86/361 (23%), Positives = 167/361 (46%), Gaps = 7/361 (1%)

Query: 66  KESCRTVR---SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           K  CR  R   +   +++ L + G   EA+ IF  +   G  P++++Y++L+       +
Sbjct: 53  KGLCRVHRISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGK 112

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 + +++ + G+ P+ + FN +I+   + G + EA        + G+     TYN+
Sbjct: 113 LEESKRLFNEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNS 172

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+   G    + KL   M  +G  + N  +Y +L+  +C    + EA N+ ++M   
Sbjct: 173 LIDGFCKIGDLSSARKLFLSMPSKG-CEHNEISYTILINGYCKIWKVEEAMNLYNEMPQV 231

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G +P+V TY+T+ T   Q G+   A ++   M+ +G+  +     I + G CK G + EA
Sbjct: 232 GKRPNVKTYSTLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEA 291

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           +     +K Y    +   ++ LI G  +    +   E    + +  + P+V+T + +++ 
Sbjct: 292 MELFNELKSYNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHG 351

Query: 363 WSTAGFMDKCKEIFDDMGKA---GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +     +DK   +F+ M K    G  PD   Y+ L +G+    + E+   LL  M +   
Sbjct: 352 FCRVEQVDKANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKRMR 411

Query: 420 H 420
           H
Sbjct: 412 H 412


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 226/468 (48%), Gaps = 6/468 (1%)

Query: 57  QTHCSFC--MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL 114
           + HC F   M +     +     ++  L +  +  +A++I   +++ G  P L TY+ ++
Sbjct: 228 KAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLII 287

Query: 115 AALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT 174
             L   K  +    ++ Q+ E G  P+SI +N++I+ +S SG   E++  F +M   G+ 
Sbjct: 288 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVI 347

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN--ITEA 232
           PT    N+ I      G+  E+  + D M  +G  KP++ +Y+ ++  +    +  + + 
Sbjct: 348 PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLADV 406

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
            N+ + M   G+ P+   +N +  AYA+ G  D+A  +  +M++ G+ P+  T   +IS 
Sbjct: 407 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 466

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
            C+ G++ +AL     M + GV P+  ++  LI+G     +     E+++ M    + P 
Sbjct: 467 LCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPP 526

Query: 353 VITY-STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
            + Y S+I+N     G + + K+I D M + G +P+   ++ L +GY      E+A  LL
Sbjct: 527 GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALL 586

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M   G  PN  I+ T++ G+C +G +D A+ VF  M   GV P    +  ++ G  +A
Sbjct: 587 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQA 646

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           R+   A+++   M   G      T+ ++         T EA  +L K+
Sbjct: 647 RRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 694



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/484 (22%), Positives = 215/484 (44%), Gaps = 39/484 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLA--ALTIQKRFNSIHS 128
           TV +    +++L + G+  EA+ IF++++  G KP +++Y+T+L   A         +H+
Sbjct: 349 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 408

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           I + +   G+ P+   FN +INA++  G M++AM  F  M+  G+ P T T+ T+I    
Sbjct: 409 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 468

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN----------------------- 225
             G+ ++++   + M   G V P+   Y  L++  CN                       
Sbjct: 469 RIGRLDDALHKFNHMVDIG-VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 527

Query: 226 -------------EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
                        E  + E  ++M  M  +G +P+VVT+N++   Y   G  ++A  ++ 
Sbjct: 528 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 587

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
            M   G++PN    G ++ GYCK G+I +AL   R M   GV P  V++++++ G  +  
Sbjct: 588 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 647

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
                 ++   M E      + TY  ++         D+   + + +    +K D   ++
Sbjct: 648 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFN 707

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           I+     +    ++A+EL   +   G  PN+  ++ +I+    + S + A  +F  + + 
Sbjct: 708 IVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKS 767

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G + + +    ++       +  +A   L I+    +  + ST  LLA      G  +E 
Sbjct: 768 GHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREH 827

Query: 513 KRIL 516
            ++L
Sbjct: 828 IKLL 831



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 202/456 (44%), Gaps = 40/456 (8%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P++ TY  L+       R +   +I+ ++ +NG+ PD  F  ++I  F + G +++A   
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDD-FSYSLIYGFVKDGEVDKAHCL 232

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F +M E G+ P     N++IK      + +++  ++  M   G + P+L TY++++   C
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG-IAPDLFTYSLIIDGLC 291

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
             K + +A  V+ +M  +G +P+ +TYN++   Y+ +G  +++  V  +M   GV P   
Sbjct: 292 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 351

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR--DGVDEVLA 342
            C   I    K G+  EA     +M   G  P+++ ++ ++ G+    D     V  +  
Sbjct: 352 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 411

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA-------------- 388
           LM    + P+   ++ ++NA++  G MDK   IF+DM   G+ PD               
Sbjct: 412 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 471

Query: 389 ---------------------HAYSILAKGYVREQEPEKAEELLMTMIESGFHP-NVVIF 426
                                  Y  L +G     E  KA+EL+  M+     P  V  F
Sbjct: 472 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 531

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           ++II+  C +G +    ++ D M + G  PN+ TF +LM GY        A  +L  M +
Sbjct: 532 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 591

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            G+ P    +  L +     G   +A  +   + +K
Sbjct: 592 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 627


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/507 (23%), Positives = 232/507 (45%), Gaps = 45/507 (8%)

Query: 54  SQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTL 113
           S  ++ CS  + +    +V + T L+ ++ +     EA  + + +   G  P++VTY  +
Sbjct: 169 SATRSPCSTMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVI 228

Query: 114 LAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL 173
           +  +  + R +    I++++   G  PD + +  V+     +   ++    F +M +   
Sbjct: 229 INGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKC 288

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
            P   T++ L++ +   G  E ++++L  MS+ G   PN    N+++ A C +  + +A+
Sbjct: 289 VPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHG-CTPNTTLCNIVINAICKQGRVDDAY 347

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
           + ++ M   G  PD ++Y T+     + G  + A+E++ EM      PN  T    I   
Sbjct: 348 DFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICIL 407

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           C++G I++A++    M EYG    +V +N L+ GF  +  R  VD  L L       P+ 
Sbjct: 408 CQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFC-VQGR--VDSALELFNNLPCEPNT 464

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           ITY+T++     A  +D   E+  +M +     +A  +++L   + ++   E+A EL+  
Sbjct: 465 ITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQ 524

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M+E G  PN++ F T++ G   D + + A+E+   +   GVS +  T+ +++   S    
Sbjct: 525 MMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSRED- 583

Query: 474 PWRAEEILQIMKAF--------------------------------------GVHPQKST 495
             R EE +Q++ A                                       G  P +ST
Sbjct: 584 --RTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNEST 641

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNK 522
           +++L E     GL KEA+ +LS++  K
Sbjct: 642 YIILIEGLAHEGLLKEARYVLSELYAK 668



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 198/452 (43%), Gaps = 49/452 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH---------- 127
           ++N +   G+  +A+ I N L   G +P +V+YTT+L  L   +R++ +           
Sbjct: 228 IINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK 287

Query: 128 -------------------------SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
                                     ++ Q+ ++G  P++   N VINA  + G +++A 
Sbjct: 288 CVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAY 347

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
           D    M   G  P T +Y T+++G   AG+ E + +LL  M R+ N  PN  T+N  +  
Sbjct: 348 DFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRK-NCPPNEVTFNTFICI 406

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C +  I +A  ++  M   G    +VTYN +   +   G  D A E+   +     +PN
Sbjct: 407 LCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPN 463

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI-----KGFVEIMDRDGV 337
             T   +++G C   ++  A      M +     N V FN+L+     KGFVE       
Sbjct: 464 TITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVE-----EA 518

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E++  M E    P++IT++T+++  +     ++  E+   +   G+  D   YS +   
Sbjct: 519 MELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDV 578

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             RE   E+A ++L  + + G  P V ++  I+   C     D+AI+ F  M  +G  PN
Sbjct: 579 LSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPN 638

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             T+  L+ G +       A  +L  + A GV
Sbjct: 639 ESTYIILIEGLAHEGLLKEARYVLSELYAKGV 670



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 68/140 (48%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L++ + +    +EA  + + L+  G     +TY++++  L+ + R      ++  V
Sbjct: 536 TFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAV 595

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++ GM P    +N ++ A  +    ++A+D F  M  +G  P  STY  LI+G    G  
Sbjct: 596 QDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLL 655

Query: 194 EESVKLLDLMSREGNVKPNL 213
           +E+  +L  +  +G +  +L
Sbjct: 656 KEARYVLSELYAKGVLSKSL 675



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 26/111 (23%), Positives = 55/111 (49%)

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
           TM++ G  P+VV +T ++   C       A+ V D+M   G +PN+ T+  ++ G     
Sbjct: 177 TMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREG 236

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           +   A+EIL  + ++G  P   ++  + +   A     + K + +++ +K+
Sbjct: 237 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKK 287


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 217/447 (48%), Gaps = 5/447 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L N L++ G  +EA+  F  + +    P + +   LL  L+   +     S    +   G
Sbjct: 187 LFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAG 246

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P    +N VI   +  G++E A   F +MK  GL P   TYN+LI GYG  G    +V
Sbjct: 247 LSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAV 306

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            + + M ++   +P++ TYN L+  +C  + I +A+  +H M   G++P+VVTY+T+  A
Sbjct: 307 SVFEEM-KDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDA 365

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G   +A +  V+M   G+QPN  T   +I   CK G + EA +    M++ GV+ N
Sbjct: 366 FCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLN 425

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVL-ALMKE-FRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           +V +  L+ G  E       +E+  AL+K  + +N  +  Y+++ + +  A  M+K  +I
Sbjct: 426 IVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQI--YTSLFHGYIKAKMMEKAMDI 483

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            ++M K  +KPD   Y     G  R+ E E +  ++  M++ G   N  I+TT+I  +  
Sbjct: 484 LEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFK 543

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G    A+ +  +M + G+   + T+  L+ G  +     +A      M   G+ P    
Sbjct: 544 VGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMI 603

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNK 522
           +  L +        +EAK + +++ +K
Sbjct: 604 YTALIDGLCKNDCLEEAKNLFNEMLDK 630



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/503 (23%), Positives = 229/503 (45%), Gaps = 39/503 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   ++  L   G  + A+++F  +   G +P +VTY +L+             S+ 
Sbjct: 250 SVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVF 309

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++++ G +PD I +N++IN F +   + +A +    MK+ GL P   TY+TLI  +  A
Sbjct: 310 EEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKA 369

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E+ K    M R G ++PN  TY  L+ A C   ++ EA+ +  +M  +G+  ++VT
Sbjct: 370 GMLLEANKFFVDMIRVG-LQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVT 428

Query: 251 YNTIATAYAQNGEADQAEE-----------------------------------VIVEME 275
           Y  +     ++G   +AEE                                   ++ EM 
Sbjct: 429 YTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMN 488

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
              ++P+    G  I G C++ +I++++   R M + G+  N  I+  LI  + ++    
Sbjct: 489 KKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTT 548

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
               +L  M++  +   V+TY  +++     G + +    FD M + G++P+   Y+ L 
Sbjct: 549 EAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALI 608

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G  +    E+A+ L   M++ G  P+ +++T++I G    G+   A+ + ++M E G+ 
Sbjct: 609 DGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGME 668

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
            +L  + +L+WG+S   Q   A+ +L  M   G+ P +   + L       G   EA   
Sbjct: 669 LDLCAYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEA--- 725

Query: 516 LSKIKNKERTNEMEAEEDIPVES 538
           L+   +  R   +    DI V S
Sbjct: 726 LALHDDMARRGLISGTIDITVPS 748



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 227/477 (47%), Gaps = 8/477 (1%)

Query: 59  HCSFCMNK-ESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL 117
            C + MNK      VRS  +L++ L +  K   A + F +++  G  PS+ TY  ++  L
Sbjct: 202 QCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTYNMVIGCL 261

Query: 118 TIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT 177
             +    +  S+  +++  G+ PD + +N++I+ + + G +  A+  F +MK++G  P  
Sbjct: 262 AREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKDAGCEPDV 321

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
            TYN+LI  +    +  ++ + L  M + G ++PN+ TY+ L+ A+C    + EA     
Sbjct: 322 ITYNSLINCFCKFERIPQAFEYLHGMKQRG-LQPNVVTYSTLIDAFCKAGMLLEANKFFV 380

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
            M   G++P+  TY ++  A  + G+ ++A ++  EM+  GV  N  T   ++ G C++G
Sbjct: 381 DMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLCEDG 440

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
           +++EA      + + G   N  I+  L  G+++    +   ++L  M +  + PD++ Y 
Sbjct: 441 RMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLLLYG 500

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           T +        ++    +  +M   G+  +++ Y+ L   Y +  +  +A  LL  M + 
Sbjct: 501 TKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEMQDL 560

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G    VV +  +I G C  G + +A+  FD M  +G+ PN+  +  L+ G  +      A
Sbjct: 561 GIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEA 620

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI 534
           + +   M   G+ P K  +  L +     G   EA  +      + R  E+  E D+
Sbjct: 621 KNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSL------RNRMVEIGMELDL 671



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 200/420 (47%), Gaps = 37/420 (8%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKE---------------------------------- 170
           F+ + N   + G +EEA   FWKM +                                  
Sbjct: 184 FDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMV 243

Query: 171 -SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
            +GL+P+  TYN +I      G  E +  L + M  +G ++P++ TYN L+  +     +
Sbjct: 244 VAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKG-LRPDIVTYNSLIDGYGKVGML 302

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
           T A +V  +M  +G +PDV+TYN++   + +     QA E +  M+  G+QPN  T   +
Sbjct: 303 TGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTL 362

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           I  +CK G + EA +F   M   G+ PN   +  LI    +I D +   ++ + M++  V
Sbjct: 363 IDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGV 422

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
           N +++TY+ +++     G M + +E+F  + KAG   +   Y+ L  GY++ +  EKA +
Sbjct: 423 NLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMD 482

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +L  M +    P+++++ T I G C    ++ ++ V  +M + G++ N   + TL+  Y 
Sbjct: 483 ILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYF 542

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI-KNKERTNEM 528
           +  +   A  +LQ M+  G+     T+ +L +     GL ++A R    + +N  + N M
Sbjct: 543 KVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIM 602


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/484 (23%), Positives = 224/484 (46%), Gaps = 35/484 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++N+L +      A+ +   +++ G  P+ VTYT+++   +   R+     +  
Sbjct: 151 VVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFR 210

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD + +N+ +++  + G  +EA + F+ M   G  P   TY  L+ GY   G
Sbjct: 211 EMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEG 270

Query: 192 KPEESVKLLDLMSREGNV----------------------------------KPNLRTYN 217
              + +   + M  +G V                                   P++ TY+
Sbjct: 271 CFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYS 330

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            L+ A C    + +A +  ++M  +G++P+ V Y+++   +  +G+  +A+E++ EM +N
Sbjct: 331 TLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNN 390

Query: 278 GV-QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
           G+ +PN      I+   CKEG++ +A      +K+ G   ++++FN LI G+  + +   
Sbjct: 391 GIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGK 450

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              VL  M    + PD  TY+T++N +  +G +D    +F +M    IKP    Y+I+  
Sbjct: 451 AFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILD 510

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  R      A+++L  MI  G   ++  +  I+ G C +   D AI +F K+C   V  
Sbjct: 511 GLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKF 570

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N+ T  T++      ++   A+++   +   G+ P  ST+ ++       G  +EA  + 
Sbjct: 571 NITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMF 630

Query: 517 SKIK 520
           S ++
Sbjct: 631 SSME 634



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/495 (25%), Positives = 231/495 (46%), Gaps = 46/495 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSI 129
           T+ +   +MN      +P+   A F  L+  G K       T+L  L   KR + ++  +
Sbjct: 7   TIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVL 66

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM-KESGL-TPTTSTYNTLIKGY 187
           + ++ E G  PD+  +  V+    +    ++A+D    M KE G+ +P   TYNT+I G+
Sbjct: 67  LRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGF 126

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT----------------- 230
              GK  ++  L   M ++G V P++ T+N ++ A C  + +                  
Sbjct: 127 FKEGKIGKACNLYHEMMQQGFV-PDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 231 ------------------EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
                             EA  +  +M   G+ PD+V++N+   +  ++G + +A E+  
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
            M   G +PN  T GI++ GY  EG   + + F  TMK  G+  N ++F +LI  + +  
Sbjct: 246 SMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAK-- 303

Query: 333 DRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
            R  +DE + ++ E +   ++PDV TYST+++A    G +    + F+ M   G++P+  
Sbjct: 304 -RGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTV 362

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGF-HPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
            Y  L +G+    +  KA+EL+  M+ +G   PN+  F +I+   C +G +  A  +FD 
Sbjct: 363 VYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDL 422

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           + + G   ++  F TL+ GY    +  +A  +L  M + G+ P   T+  L      +G 
Sbjct: 423 VKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGR 482

Query: 509 TKEAKRILSKIKNKE 523
             +   +  ++ +K+
Sbjct: 483 IDDGLNLFREMSDKK 497



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/449 (23%), Positives = 222/449 (49%), Gaps = 2/449 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++   + GK  +A  +++ +++ G  P +VT+ +++ AL   +  ++   ++ 
Sbjct: 116 VVTYNTVIHGFFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLR 175

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ +NG+ P+ + + ++I+ +S  G  EEA   F +M   GL P   ++N+ +      G
Sbjct: 176 QMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHG 235

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+ ++   M+ +G+ +PN+ TY +L+  +  E    +  +  + M   G+  + + +
Sbjct: 236 RSKEAAEIFYSMAAKGH-RPNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVF 294

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +  AYA+ G  D+A  ++ EM+  G+ P+  T   +IS  C+ G++ +A+     M  
Sbjct: 295 TILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIG 354

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDE-VLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            GV PN V+++ LI+GF    D     E V  +M      P++  +++I+++    G + 
Sbjct: 355 TGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVM 414

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               IFD +   G + D   ++ L  GY    E  KA  +L  MI +G  P+   + T++
Sbjct: 415 DAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTLV 474

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+   G +D  + +F +M +  + P   T+  ++ G   A +   A+++L  M   G  
Sbjct: 475 NGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGTT 534

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
               T+ ++ +       T EA  +  K+
Sbjct: 535 VSLPTYNIILKGLCRNNCTDEAIVMFQKL 563



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/424 (23%), Positives = 204/424 (48%), Gaps = 8/424 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S    M+SL + G+ +EA  IF ++   GH+P++VTY  LL     +  F  + S  +
Sbjct: 221 IVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFN 280

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++ +G+  + + F  +I+A+++ G M+EAM    +M+  GL+P   TY+TLI      G
Sbjct: 281 TMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMG 340

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM-KPDVVT 250
           +  ++V   + M   G V+PN   Y+ L++ +C   ++ +A  ++++M  +G+ +P++  
Sbjct: 341 RLADAVDKFNQMIGTG-VQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAF 399

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +N+I  +  + G    A  +   ++  G + +      +I GYC  G++ +A      M 
Sbjct: 400 FNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMI 459

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAG 367
             G+ P+   +N L+ G+ +      +D+ L L +E    ++ P  +TY+ I++    AG
Sbjct: 460 SAGIGPDTFTYNTLVNGYFK---SGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAG 516

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
                +++  +M   G       Y+I+ KG  R    ++A  +   +       N+    
Sbjct: 517 RTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLN 576

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T+I+   +    + A ++F  + + G+ PN  T+  ++    +      A+ +   M+  
Sbjct: 577 TMINSMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKS 636

Query: 488 GVHP 491
           G  P
Sbjct: 637 GCAP 640


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 187/373 (50%), Gaps = 1/373 (0%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           L E    P++ T+  ++  L  +       +++++++  G  PD + +N++I+ + + G 
Sbjct: 185 LFEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGE 244

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           +EE      +M+  G  P   TYN L+  +   G+ E +      M REG V  N+ T++
Sbjct: 245 LEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREG-VMANVVTFS 303

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
             V A+C    + EA  +  +M   GMKP+ VTY  +     + G  D A  +  EM   
Sbjct: 304 TFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQ 363

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           GV  N  T  +++ G CKEGK+ EA    R M+  G+  N +++  LI G     + +  
Sbjct: 364 GVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERA 423

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
             +L+ MK+  +  DV  Y  ++        +D+ K + + M + G+KP+   Y+ +   
Sbjct: 424 LSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDA 483

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             + ++  +A  LL  M++SGF PN+V +  ++ G C  GS+D AI  F+KM + G+ PN
Sbjct: 484 CFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPN 543

Query: 458 LKTFETLMWGYSE 470
           ++ +  L+ G  +
Sbjct: 544 VQAYTALVDGLCK 556



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 210/437 (48%), Gaps = 5/437 (1%)

Query: 80  NSLIER----GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           NSLI+     G+ +E + +   +   G +P +VTY  L+       R    +S  ++++ 
Sbjct: 233 NSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKR 292

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+  + + F+  ++AF ++G + EAM  F +M+  G+ P   TY  L+ G   AG+ ++
Sbjct: 293 EGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDD 352

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++ L + M ++G V  N+ TY VLV   C E  + EA +V   M  +G++ + + Y T+ 
Sbjct: 353 ALVLTNEMVQQG-VPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLI 411

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             +     +++A  ++ EM+  G++ +    G +I G C   K+ EA      M E G+ 
Sbjct: 412 HGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLK 471

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN VI+  ++    +         +L  M +    P+++TY  +++    AG +D+    
Sbjct: 472 PNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISH 531

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F+ M   G++P+  AY+ L  G  +    +KA  LL  MI+ G   + V+ T+++ G   
Sbjct: 532 FNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLK 591

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G++  A  +  KM   G+  +L  +   +WG+        A E+L  M   G+ P    
Sbjct: 592 QGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVV 651

Query: 496 FLLLAEARRATGLTKEA 512
           +  L    +  G  +EA
Sbjct: 652 YNCLINKCQKLGNMEEA 668



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/371 (24%), Positives = 182/371 (49%), Gaps = 1/371 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + +  +++  + G  +EA  +F  +   G KP+ VTYT L+       R +    + +
Sbjct: 299 VVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTN 358

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G+  + + +  +++   + G + EA D F  M+ +G+      Y TLI G+ +  
Sbjct: 359 EMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYK 418

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E ++ LL  M  +G ++ ++  Y  L+   CN + + EA ++++KM   G+KP+ V Y
Sbjct: 419 NSERALSLLSEMKDKG-MELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIY 477

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             I  A  +  +  +A  ++ +M  +G +PN  T   ++ G CK G I EA+     M +
Sbjct: 478 TNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVD 537

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN+  +  L+ G  +    D    +L  M +  ++ D +  +++M+     G +  
Sbjct: 538 LGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQD 597

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +   M  +G++ D + Y+    G+      ++A E+L  MIE+G  P+ V++  +I+
Sbjct: 598 AFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLIN 657

Query: 432 GWCSDGSMDRA 442
                G+M+ A
Sbjct: 658 KCQKLGNMEEA 668



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/308 (26%), Positives = 148/308 (48%), Gaps = 1/308 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++ L + GK  EA+ +F  +   G + + + YTTL+    + K      S++S
Sbjct: 369 VVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLS 428

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++++ GM+ D   + A+I        ++EA     KM E GL P    Y  ++     A 
Sbjct: 429 EMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKAR 488

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  E++ LL  M   G  +PN+ TY  LV   C   +I EA +  +KM   G++P+V  Y
Sbjct: 489 KESEAIALLQKMMDSG-FRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAY 547

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     +NG  D+A  ++ EM   G+  +   C  ++ G+ K+G +++A      M  
Sbjct: 548 TALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMIN 607

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  +L  +   + GF  +       EVL+ M E  + PD + Y+ ++N     G M++
Sbjct: 608 SGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEE 667

Query: 372 CKEIFDDM 379
              + ++M
Sbjct: 668 AAILQNEM 675



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/308 (24%), Positives = 138/308 (44%), Gaps = 33/308 (10%)

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC------------------- 286
           P VV  +T+ +  A  G  D A   +  +    V PN RTC                   
Sbjct: 128 PSVV--DTLLSLLADRGLLDDAVLALARVRELRVPPNTRTCNHILLCLARERSSELAWRL 185

Query: 287 ------------GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
                        I+I   CKEG + EA      MK  G  P++V +N LI G+ +  + 
Sbjct: 186 FEQLPAPNVFTFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGEL 245

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           + V++++  M+     PDV+TY+ ++N +   G M++    F +M + G+  +   +S  
Sbjct: 246 EEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTF 305

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
              + +     +A +L   M   G  PN V +T ++ G C  G +D A+ + ++M + GV
Sbjct: 306 VDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGV 365

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
             N+ T+  L+ G  +  +   AE++ ++M+  G+   +  +  L         ++ A  
Sbjct: 366 PLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALS 425

Query: 515 ILSKIKNK 522
           +LS++K+K
Sbjct: 426 LLSEMKDK 433


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 220/434 (50%), Gaps = 2/434 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++++  ++   +EA+A++  +I  G  P +VTY++++  L    R +    ++ ++
Sbjct: 240 TYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREM 299

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++ G+DP+ + +  +I++  ++G+  EA     ++   G+T       TL+ G   + KP
Sbjct: 300 KKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKP 359

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+  +   +S+  N+ PN  TY  L+  +C   ++    +++ +M    + P+V+TY++
Sbjct: 360 KEAEDMFRALSKL-NLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSS 418

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           I   Y + G  D+A  V+ +M    + PN     I+I GYCK GK + A      MK  G
Sbjct: 419 IINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSG 478

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           +  N V+F++L+         D  +E+L  +    +  D + Y+++M+ +  AG      
Sbjct: 479 LKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAAL 538

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            + ++M +  I  D   Y++L  G +   + E A+ +   MIE G  PN   +  +I  +
Sbjct: 539 NMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAY 597

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G +D A+E++++M  H + P+  T  TL+ G SEA +  +A  +L  M   G+HP  
Sbjct: 598 CKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNL 657

Query: 494 STFLLLAEARRATG 507
               +L  A   +G
Sbjct: 658 VIHRVLLNASSKSG 671



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 191/411 (46%), Gaps = 55/411 (13%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           IM  +   G   D I FN +I+ + ++G M  A+D   +M++ GL     +YNTLI G+ 
Sbjct: 134 IMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFC 193

Query: 189 IAGKPEESVKLLDLMSREGNVK--------------------PNLRTYNVLVRAWCNEKN 228
             G+ +++  LL  +S    VK                     +L TY  ++  +C +  
Sbjct: 194 KRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHG 253

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN------ 282
           + EA  +  +M  +G  PDVVTY++I     ++G   +A+E++ EM+  GV PN      
Sbjct: 254 LEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTT 313

Query: 283 ------------------------GRT-----CGIIISGYCKEGKIKEALRFARTMKEYG 313
                                   G T     C  ++ G  K  K KEA    R + +  
Sbjct: 314 LIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLN 373

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + PN + +  LI G+ ++ D + V+ +L  M+E  +NP+VITYS+I+N ++  G +D+  
Sbjct: 374 LIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAI 433

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +   M    I P+A+ Y+IL  GY +  + E A +L   M  SG   N V+F  +++  
Sbjct: 434 NVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNL 493

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
                MD A E+   +   G+  +   + +LM G+ +A +   A  +++ M
Sbjct: 494 KRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEM 544



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/489 (24%), Positives = 222/489 (45%), Gaps = 49/489 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   + GK + A  ++N +   G K + V +  L+  L   KR +    ++  V   G
Sbjct: 454 LIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRG 513

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D + + ++++ F ++G    A++   +M E  +     TYN LI G    GK E   
Sbjct: 514 LLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEAKS 573

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
               ++  E  + PN  TYN++++A+C +  +  A  + ++M +  + P  +T NT+   
Sbjct: 574 VYSGMI--EMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVG 631

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            ++ GE ++A  V+ EM   G+ PN     ++++   K GK    L+    + + G+  N
Sbjct: 632 LSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKIN 691

Query: 318 LVIFNLLIKGFVEI------------MDRDG--------------------VDEVLALMK 345
              +N LI  F  +            M RDG                    V + LA   
Sbjct: 692 QEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYT 751

Query: 346 EFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
           +     V+P+++TY+ ++     AG M +  E+FD M + G+ PDA  Y  L  GY +  
Sbjct: 752 QMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIG 811

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             +++  L   M+  GF P    +  +IS +   G MD+A E+ ++M   GV P+  T++
Sbjct: 812 NKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYD 871

Query: 463 TLMWGYSE-ARQP---------WR--AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
            L+ G+   ++ P         +R  A+ ++  M   G  P KST   ++      G   
Sbjct: 872 ILICGWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKML 931

Query: 511 EAKRILSKI 519
           +A+++L +I
Sbjct: 932 DAEKLLKEI 940



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/478 (21%), Positives = 225/478 (47%), Gaps = 29/478 (6%)

Query: 68  SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           +C+ V     L++   + G+   A  +   + + G    +V+Y TL+     +  ++   
Sbjct: 143 TCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAK 202

Query: 128 SIMSQVEENGMDPDSIFFN---------------------AVINAFSESGNMEEAMDTFW 166
           S++ ++ E+    DS+FFN                      +I+ + +   +EEA   + 
Sbjct: 203 SLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYE 262

Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
           +M  +G  P   TY++++ G    G+  E+ +LL  M + G V PN   Y  L+ +    
Sbjct: 263 EMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMG-VDPNHVAYTTLIDSLFKA 321

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
            +  EA+    ++   GM  D+V   T+     ++ +  +AE++   +    + PN  T 
Sbjct: 322 GSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITY 381

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             +I GYCK G ++      + M+E  ++PN++ ++ +I G+ +   +  +DE + +MK+
Sbjct: 382 TALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTK---KGILDEAINVMKK 438

Query: 347 F---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
                + P+   Y+ +++ +  AG  +   +++++M  +G+K +   + +L     R + 
Sbjct: 439 MLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKR 498

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            ++AEELL  +   G   + V +T+++ G+   G    A+ + ++M E  +  ++ T+  
Sbjct: 499 MDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNV 558

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           L+ G  E    + A+ +   M   G+ P ++T+ ++ +A    G    A  + +++K+
Sbjct: 559 LINGLLE-HGKYEAKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKS 615



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/405 (22%), Positives = 182/405 (44%), Gaps = 25/405 (6%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P  + +N +I  F+  G + +  D + +M  S + P   T+N L+  +   G     +  
Sbjct: 8   PTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNL---ILA 64

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           LDL+ R  +V+ +  TYN ++  +C    + +A+  +  M       D +T N +   + 
Sbjct: 65  LDLL-RNVDVEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFC 123

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           + G A   E ++  +   G   +      +I GYCK G++  AL     M++ G+  ++V
Sbjct: 124 RIGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIV 183

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFR---------------------VNPDVITYST 358
            +N LI GF +  + D    +L  + E R                     +  D+ITY+T
Sbjct: 184 SYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTT 243

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           I++ +     +++ + ++++M   G  PD   YS +  G  ++    +A+ELL  M + G
Sbjct: 244 IISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMG 303

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PN V +TT+I      GS   A     ++   G++ +L    TL+ G  ++ +P  AE
Sbjct: 304 VDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAE 363

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           ++ + +    + P   T+  L +     G  +  + +L +++ K 
Sbjct: 364 DMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKH 408


>gi|356556194|ref|XP_003546411.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 829

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 218/447 (48%), Gaps = 1/447 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +  +L  + +  G   E  A+ + +   G  P+ +TYTT++ A     R +    + S +
Sbjct: 358 TYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLM 417

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++ G  P+   +N+V+    +    E+ +    +MK +G  P  +T+NT++      GK 
Sbjct: 418 KDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKH 477

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
               K+L  M   G  +P+  T+N L+ A+    +  ++  +  +M  SG  P V TYN 
Sbjct: 478 NYVNKVLREMKNCG-FEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNA 536

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A A+ G+   AE VI +M   G +PN  +  +++  Y K G +K   +  + + +  
Sbjct: 537 LLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGH 596

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V P+ ++   L+    +     G++     ++++   PD++  +++++ ++      K +
Sbjct: 597 VFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAR 656

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+   + + G++P+   Y+ L   YVRE E  KAEE+L  +  SG  P+VV + T+I G+
Sbjct: 657 EMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGF 716

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G M  AI V  +M   G+ P + T+ T + GY+       A E+++ M      P +
Sbjct: 717 CRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSE 776

Query: 494 STFLLLAEARRATGLTKEAKRILSKIK 520
            T+ +L +     G  +EA   +SKIK
Sbjct: 777 LTYKILVDGYCKAGKYEEAMDFVSKIK 803



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/459 (23%), Positives = 218/459 (47%), Gaps = 7/459 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++ +C TV      +++    G   EA+     L   G+KP  VTY ++L        +
Sbjct: 284 LDEFTCSTV------ISACGREGMLDEARKFLAELKFNGYKPGTVTYNSMLQVFGKAGIY 337

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
               SI+ ++E+N   PDS+ +N +   +  +G ++E M     M   G+ P   TY T+
Sbjct: 338 TEALSILKEMEDNNCPPDSVTYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTV 397

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I  YG AG+ +++++L  LM   G   PN+ TYN ++     +    +   V+ +M  +G
Sbjct: 398 IDAYGKAGREDDALRLFSLMKDLG-CAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNG 456

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             P+  T+NT+    ++ G+ +   +V+ EM++ G +P+  T   +IS Y + G   ++ 
Sbjct: 457 CAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSEVDSA 516

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
           +    M + G  P +  +N L+       D    + V+  M+     P+  +YS +++ +
Sbjct: 517 KMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSLLLHCY 576

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
           S AG +   +++  ++    + P       L     + +     E     + + G+ P++
Sbjct: 577 SKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYGYKPDL 636

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           V+  +++S +  +    +A E+   + E G+ PNL T+  LM  Y    + W+AEE+L+ 
Sbjct: 637 VVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAEEVLKG 696

Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           ++  G  P   ++  + +     GL +EA  +LS++  K
Sbjct: 697 IQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTK 735



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/416 (25%), Positives = 197/416 (47%), Gaps = 1/416 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++++  + G+  +A  +F+ + + G  P++ TY ++LA L  + R   +  ++ ++
Sbjct: 393 TYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEM 452

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + NG  P+   +N ++   SE G          +MK  G  P   T+NTLI  Y   G  
Sbjct: 453 KLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISAYARCGSE 512

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            +S K+   M + G   P + TYN L+ A     +   A +V+  M   G KP+  +Y+ 
Sbjct: 513 VDSAKMYGEMVKSG-FTPCVTTYNALLNALARRGDWKAAESVIQDMRTKGFKPNENSYSL 571

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y++ G     E+V  E+    V P+      ++    K   ++   R    +++YG
Sbjct: 572 LLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRHLRGMERAFDQLQKYG 631

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P+LV+ N ++  F          E+L  + E  + P++ TY+ +M+ +   G   K +
Sbjct: 632 YKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREGECWKAE 691

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+   +  +G +PD  +Y+ + KG+ R+   ++A  +L  M   G  P +V + T +SG+
Sbjct: 692 EVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKGIQPTIVTYNTFLSGY 751

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
                 D A EV   M EH   P+  T++ L+ GY +A +   A + +  +K   +
Sbjct: 752 AGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAMDFVSKIKELDI 807



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 110/455 (24%), Positives = 217/455 (47%), Gaps = 20/455 (4%)

Query: 125 SIHSIMSQ------VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
           S HSI S+      VE+  +D  +  +  ++++++ +G  + A+D F KMKE GL PT  
Sbjct: 194 SQHSIASKLFDLIPVEKYSLDVRA--YTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLV 251

Query: 179 TYNTLIKGYGIAGKPEESV-KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
           TYN ++  YG  G+  + + +LLD M  +G ++ +  T + ++ A   E  + EA   + 
Sbjct: 252 TYNVMLDVYGKMGRSWDRILELLDEMRSKG-LELDEFTCSTVISACGREGMLDEARKFLA 310

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           ++  +G KP  VTYN++   + + G   +A  ++ EME N   P+  T   + + Y + G
Sbjct: 311 ELKFNGYKPGTVTYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAG 370

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
            + E +    TM   GV PN + +  +I  + +    D    + +LMK+    P+V TY+
Sbjct: 371 FLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYN 430

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           +++         +   ++  +M   G  P+   ++ +      E +     ++L  M   
Sbjct: 431 SVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNC 490

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR- 476
           GF P+   F T+IS +   GS   + +++ +M + G +P + T+  L+   +  R  W+ 
Sbjct: 491 GFEPDKDTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAR-RGDWKA 549

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE--------RTNEM 528
           AE ++Q M+  G  P ++++ LL       G  K  +++  +I +          RT  +
Sbjct: 550 AESVIQDMRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVL 609

Query: 529 EAEEDIPVESLERLYHKEATTASYPNLLQIPNVVS 563
              +   +  +ER + +       P+L+ I +++S
Sbjct: 610 TNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLS 644



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 88/375 (23%), Positives = 164/375 (43%), Gaps = 82/375 (21%)

Query: 86  GKPQEAQAIFNNLIE---GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS 142
           GK    + +   L E    G  P+  T+ T+LA  + + + N ++ ++ +++  G +PD 
Sbjct: 437 GKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDK 496

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG----------- 191
             FN +I+A++  G+  ++   + +M +SG TP  +TYN L+      G           
Sbjct: 497 DTFNTLISAYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALARRGDWKAAESVIQD 556

Query: 192 ------KPEESVK--LLDLMSREGNVK--------------------------------- 210
                 KP E+    LL   S+ GNVK                                 
Sbjct: 557 MRTKGFKPNENSYSLLLHCYSKAGNVKGIEKVEKEIYDGHVFPSWILLRTLVLTNHKCRH 616

Query: 211 -----------------PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
                            P+L   N ++  +   K  ++A  ++H +   G++P++ TYN 
Sbjct: 617 LRGMERAFDQLQKYGYKPDLVVINSMLSMFARNKMFSKAREMLHFIHECGLQPNLFTYNC 676

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y + GE  +AEEV+  ++++G +P+  +   +I G+C++G ++EA+     M   G
Sbjct: 677 LMDLYVREGECWKAEEVLKGIQNSGPEPDVVSYNTVIKGFCRKGLMQEAIGVLSEMTTKG 736

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG------ 367
           + P +V +N  + G+  +   D  +EV+  M E    P  +TY  +++ +  AG      
Sbjct: 737 IQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKYEEAM 796

Query: 368 -FMDKCKEI---FDD 378
            F+ K KE+   FDD
Sbjct: 797 DFVSKIKELDISFDD 811



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 102/438 (23%), Positives = 179/438 (40%), Gaps = 61/438 (13%)

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNM----------EEAMDTFWKMKESGL 173
           NS+HS    +    +  +  F +A     S+ G +           E  D F  +K   L
Sbjct: 80  NSVHSKHPTLGSGSIIDEDKFDDAKFGFLSDKGKLLFSSIVGSPLHELNDFFNSVKFELL 139

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN----VLVRAWCNEKNI 229
               + + +L+K   ++G  E ++ L +          NLR  N    ++VR    E   
Sbjct: 140 E---ADFPSLLKALDLSGNWERALLLFEWGWLHFGSDQNLRLDNQVVELMVRILGRESQH 196

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA------------------------- 264
           + A  +   +       DV  Y TI  +YA+ G+                          
Sbjct: 197 SIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAIDLFGKMKEIGLDPTLVTYNVM 256

Query: 265 -----------DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
                      D+  E++ EM   G++ +  TC  +IS   +EG + EA +F   +K  G
Sbjct: 257 LDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISACGREGMLDEARKFLAELKFNG 316

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGV-DEVLALMKEFRVN---PDVITYSTIMNAWSTAGFM 369
             P  V +N ++    ++  + G+  E L+++KE   N   PD +TY+ +   +  AGF+
Sbjct: 317 YKPGTVTYNSML----QVFGKAGIYTEALSILKEMEDNNCPPDSVTYNELAATYVRAGFL 372

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D+   + D M   G+ P+A  Y+ +   Y +    + A  L   M + G  PNV  + ++
Sbjct: 373 DEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSLMKDLGCAPNVYTYNSV 432

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           ++        +  I+V  +M  +G +PN  T+ T++   SE  +     ++L+ MK  G 
Sbjct: 433 LAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGF 492

Query: 490 HPQKSTFLLLAEARRATG 507
            P K TF  L  A    G
Sbjct: 493 EPDKDTFNTLISAYARCG 510



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 1/138 (0%)

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           ++ D     ++ +   RE +   A +L   +    +  +V  +TTI+  +   G   RAI
Sbjct: 176 LRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHSYARTGKYKRAI 235

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPW-RAEEILQIMKAFGVHPQKSTFLLLAEA 502
           ++F KM E G+ P L T+  ++  Y +  + W R  E+L  M++ G+   + T   +  A
Sbjct: 236 DLFGKMKEIGLDPTLVTYNVMLDVYGKMGRSWDRILELLDEMRSKGLELDEFTCSTVISA 295

Query: 503 RRATGLTKEAKRILSKIK 520
               G+  EA++ L+++K
Sbjct: 296 CGREGMLDEARKFLAELK 313


>gi|222632709|gb|EEE64841.1| hypothetical protein OsJ_19698 [Oryza sativa Japonica Group]
          Length = 496

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 181/349 (51%), Gaps = 4/349 (1%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           A++N   + G++ EA   F +M   GL P   TY  L+ GY   G+ E+   L + M R 
Sbjct: 43  ALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEM-RR 101

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G V+PNL TYN L+  WC       A ++  +M   G+  +VV+YNT+     ++G+   
Sbjct: 102 GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD 161

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A +++  M   G +P+  T  +++ GY K GK+  AL F   MK  G  P+ V +N+LI 
Sbjct: 162 AAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIA 221

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GF    D    +  L+ MKE  + P  +TY+ ++++++    M K  EI   M KAG++ 
Sbjct: 222 GFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEV 281

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           DAH Y +L +    E   + A +L  +M E G  P+ VI+  +I G+  +GS  +A+++ 
Sbjct: 282 DAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLI 341

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM---KAFGVHPQ 492
            +M + G+ PN  ++   +    +  +   AE +L  M   ++F  H Q
Sbjct: 342 MEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMETIRSFAGHHQ 390



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 169/357 (47%), Gaps = 10/357 (2%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESG-----LTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           A +     +G++  A+    +  +SG     +T  T+  N   KG  +A    E+ ++ D
Sbjct: 7   AAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVA----EARRVFD 62

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M   G + PN  TY  L+  +       + + +  +M   G++P++ TYN +   + + 
Sbjct: 63  EMPLLG-LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRT 121

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           GE ++A  +  EM   G+  N  +   +I+G C+ GK+ +A +    M+  G  P+++ F
Sbjct: 122 GEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITF 181

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           NLL+ G+ +             MK     P  +TY+ ++  +  A  M +      DM +
Sbjct: 182 NLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKE 241

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G++P    Y+IL   + RE    KA E+L  M ++G   +   +  ++   C +G+M  
Sbjct: 242 RGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKD 301

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           A ++F  M E GV P+   ++ +++GY      ++A +++  M+  G+ P  +++ L
Sbjct: 302 ARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGL 358



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 172/357 (48%), Gaps = 5/357 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+N   + G   EA+ +F+ +   G  P+ VTYT L+       +     ++  
Sbjct: 38  VTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFE 97

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G++P+   +N +I  +  +G  E A   F +M   G+     +YNTLI G    G
Sbjct: 98  EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHG 157

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  ++ KLLD+M  EG  +P++ T+N+LV  +     ++ A    ++M A+G +P  VTY
Sbjct: 158 KLWDAAKLLDMMRTEG-TRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   + +  +  +A   + +M+  G++P   T  I+I  + +E  + +A      M++
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  +   + +L++      +     ++   M E  V P  + Y  ++  +   G   K
Sbjct: 277 AGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYK 336

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL--MTMIES--GFHPNVV 424
             ++  +M + G+ P++ +Y +  +   ++ + ++AE LL  M  I S  G H N +
Sbjct: 337 ALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMETIRSFAGHHQNFI 393



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 5/254 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R V S   L+  L   GK  +A  + + +   G +PS++T+  L+       + ++    
Sbjct: 141 RNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPF 200

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
            +Q++  G  P ++ +N +I  F  + +M  A      MKE GL PT  TY  LI  +  
Sbjct: 201 FNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFAR 260

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
                ++ ++L  M + G ++ +  TY VLVRA C E N+ +A  +   M   G++P  V
Sbjct: 261 ENHMGKAFEILAGMEKAG-LEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNV 319

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA---LRFA 306
            Y+ +   Y + G + +A ++I+EM   G+ PN  + G+ I   CK+ K +EA   L   
Sbjct: 320 IYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379

Query: 307 RTMKEY-GVHPNLV 319
            T++ + G H N +
Sbjct: 380 ETIRSFAGHHQNFI 393



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 6/220 (2%)

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
           C  +++G CK G + EA R    M   G+ PN V +  L+ G+     R   ++  AL +
Sbjct: 41  CTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQR---EKGFALFE 97

Query: 346 EFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
           E R   V P++ TY+ ++  W   G  ++ + +FD+M   GI  +  +Y+ L  G  R  
Sbjct: 98  EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHG 157

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           +   A +LL  M   G  P+++ F  ++ G+   G M  A+  F++M   G  P+  T+ 
Sbjct: 158 KLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYN 217

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            L+ G+  AR   RA   L  MK  G+ P K T+ +L ++
Sbjct: 218 MLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDS 257



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 130/304 (42%), Gaps = 1/304 (0%)

Query: 220 VRAWCNEKNITEAWNVMHKMAASG-MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           VR  C   ++  A  ++ +   SG    DV     +     + G+  +A  V  EM   G
Sbjct: 9   VRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLG 68

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           + PN  T   ++ GY   G+ ++       M+  GV PNL  +N LI  +    + +   
Sbjct: 69  LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERAR 128

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            +   M    +  +V++Y+T++      G +    ++ D M   G +P    +++L  GY
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY 188

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +  +   A      M  +GF P+ V +  +I+G+C    M RA      M E G+ P  
Sbjct: 189 GKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTK 248

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+  L+  ++      +A EIL  M+  G+     T+ +L  A    G  K+A+++   
Sbjct: 249 VTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQS 308

Query: 519 IKNK 522
           +  K
Sbjct: 309 MGEK 312


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 212/442 (47%), Gaps = 1/442 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L + G  +EA+A+F ++ E G     V Y TL+  L       +   +  ++ E  
Sbjct: 510 LVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERN 569

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD++ +N  IN     G   EA     +M+ +GL P  +TYNT+I      G   +++
Sbjct: 570 LSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKAL 629

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL+ M +  ++KPNL TY  LV        + +A  ++++MA++G  P  +TY  +  A
Sbjct: 630 KLLNEM-KWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQA 688

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            + +       EV   M   G+  +      ++   C  G  ++A      M   G+ P+
Sbjct: 689 CSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPD 748

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + FN LI G  +    D      A M    ++P++ T++T++    +AG + +   +  
Sbjct: 749 TITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVIC 808

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K G++P+   Y IL  GY ++    +A  L   M+  GF P    + ++IS +   G
Sbjct: 809 EMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAG 868

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M++A E+F +M   GV     T++ L+ G+S+ R       +L+ MK  G  P K T  
Sbjct: 869 MMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTIS 928

Query: 498 LLAEARRATGLTKEAKRILSKI 519
            ++ A    G+T EA+R+L  +
Sbjct: 929 SMSRAFSKPGMTWEARRLLKTL 950



 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 217/451 (48%), Gaps = 1/451 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +++ L++ L   G+  EA A+F  + + G  P+ VTY T + +L   +R N    ++ 
Sbjct: 294 VVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLG 353

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+  D + +  V++   + G +EEA D         +TP   TY  L+  +  AG
Sbjct: 354 EMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAG 413

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + + ++L L   E +V PN+ T++ ++        I +A   M KM  SG+ P+VVTY
Sbjct: 414 NIDGAEQML-LQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTY 472

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   + +    + A +V  +M H GV+ N      +++G  K G I+EA    + M E
Sbjct: 473 GTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGE 532

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  + V +  L+ G  +  +     +V   + E  ++PD + Y+  +N     G   +
Sbjct: 533 RGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSE 592

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            K    +M   G++PD   Y+ +     RE    KA +LL  M  S   PN++ +TT++ 
Sbjct: 593 AKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVV 652

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G    G +++A  + ++M   G +P   T+  ++   S +R P+   E+ ++M   G+H 
Sbjct: 653 GLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHA 712

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             + +  L       G+T++A  +L ++  +
Sbjct: 713 DITVYNTLVHVLCCHGMTRKATIVLDEMLGR 743



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/475 (25%), Positives = 206/475 (43%), Gaps = 41/475 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +M+ L + GK +EA+ +  + +     P+ VTYT L+ A       +    ++ Q+EE
Sbjct: 368 TTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEE 427

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + P+ + F++++N   + G + +A     KMK+SG+ P   TY TLI G+      E 
Sbjct: 428 KSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEA 487

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM----------- 244
           ++ +   M  EG V+ N    + LV       NI EA  +   M   G+           
Sbjct: 488 ALDVYRDMLHEG-VEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLM 546

Query: 245 ------------------------KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
                                    PD V YN       + G+  +A+  + EM + G++
Sbjct: 547 DGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLE 606

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+  T   +IS  C+EG   +AL+    MK   + PNL+ +  L+ G +E    +    +
Sbjct: 607 PDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYL 666

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L  M      P  +TY  ++ A S +       E+ + M  AG+  D   Y+ L      
Sbjct: 667 LNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCC 726

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
                KA  +L  M+  G  P+ + F  +I G C    +D A   + +M   G+SPN+ T
Sbjct: 727 HGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIAT 786

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           F TL+ G   A +   A+ ++  MK  G+ P   T+ +L      TG  K++ ++
Sbjct: 787 FNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDIL-----VTGYAKKSNKV 836



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 215/452 (47%), Gaps = 3/452 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + ++N L++RG   +A      + + G  P++VTY TL+      +   +   +  
Sbjct: 434 VVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYR 493

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G++ ++   ++++N   ++GN+EEA   F  M E GL      Y TL+ G    G
Sbjct: 494 DMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTG 553

Query: 192 KPEESVKL-LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
               ++K+  +LM R  N+ P+   YNV +   C     +EA + + +M  +G++PD  T
Sbjct: 554 NMPAALKVGQELMER--NLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQAT 611

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+ +A  + G   +A +++ EM+ + ++PN  T   ++ G  + G +++A      M 
Sbjct: 612 YNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMA 671

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  P  + +  +++          + EV  LM    ++ D+  Y+T+++     G   
Sbjct: 672 SAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTR 731

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   + D+M   GI PD   ++ L  G+ +    + A      M+  G  PN+  F T++
Sbjct: 732 KATIVLDEMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLL 791

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G  S G +  A  V  +M + G+ PN  T++ L+ GY++      A  +   M + G  
Sbjct: 792 GGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFI 851

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P+ ST+  L       G+  +AK + S++K +
Sbjct: 852 PKASTYNSLISDFAKAGMMNQAKELFSEMKRR 883



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 208/450 (46%), Gaps = 3/450 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSL--VTYTTLLAALTIQKRFNSIHSIMS 131
           +M+  +  L   G   EA A+   L+ G     L  V +  L+      +   +  +++ 
Sbjct: 154 TMSTALVGLSRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVE 213

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+  D + +N ++  F  SG+ + A +   +MK  G+ P+  T+ TLI  Y    
Sbjct: 214 RMTTQGLSLDVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMK 273

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE+  L + M R G V P++ T + LV   C +   +EA+ +  +M   G+ P+ VTY
Sbjct: 274 RIEEAFTLYEGMVRSG-VLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTY 332

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T   + A+    +++  ++ EM   GV  +      ++    KEGKI+EA    R    
Sbjct: 333 CTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALS 392

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             + PN V + +L+       + DG +++L  M+E  V+P+V+T+S+I+N     G + K
Sbjct: 393 DNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAK 452

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
                  M  +GI P+   Y  L  G+ + Q  E A ++   M+  G   N  I  ++++
Sbjct: 453 AAGYMRKMKDSGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVN 512

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G   +G+++ A  +F  M E G+  +   + TLM G  +      A ++ Q +    + P
Sbjct: 513 GLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSP 572

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKN 521
               + +        G   EAK  L +++N
Sbjct: 573 DAVVYNVFINCLCRLGKFSEAKSFLKEMRN 602



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 214/481 (44%), Gaps = 23/481 (4%)

Query: 47  SNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPS 106
           S  +P    P T  S  ++  S   +R    L+ S      PQ   A             
Sbjct: 71  SRFRPVPGDPLTLNSIILSYCSLHALRPALSLLRS---SSGPQPQVA-----------AD 116

Query: 107 LVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW 166
            V+Y   LA L+ Q        ++S++ + G+  D +  +  +   S +G + EA     
Sbjct: 117 TVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGLSRTGLVGEAAALAE 176

Query: 167 KM-KESGLTPTTST-YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
            + +  G+       +N LI GY        ++ +++ M+ +G +  ++  YN LV  + 
Sbjct: 177 MLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQG-LSLDVVGYNTLVAGFF 235

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
              +   AW V  +M A G++P VVT+ T+   Y +    ++A  +   M  +GV P+  
Sbjct: 236 YSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVV 295

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T   ++ G C++G+  EA    R M + GV PN V +   I    ++     V+E L L+
Sbjct: 296 TLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQR---VNESLGLL 352

Query: 345 KEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
            E     V  D++ Y+T+M+     G +++ K++        I P+   Y++L   + R 
Sbjct: 353 GEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRA 412

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
              + AE++L+ M E    PNVV F++I++G    G + +A     KM + G++PN+ T+
Sbjct: 413 GNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTY 472

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            TL+ G+ + +    A ++ + M   GV         L    R  G  +EA+ +   +  
Sbjct: 473 GTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGE 532

Query: 522 K 522
           +
Sbjct: 533 R 533



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 150/331 (45%), Gaps = 1/331 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   +A  + N +     KP+L+TYTTL+  L           +++++   G  P  + +
Sbjct: 623 GNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTY 682

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             V+ A S S +    ++    M  +GL    + YNTL+      G   ++  +LD M  
Sbjct: 683 RRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLG 742

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G + P+  T+N L+   C   ++  A+    +M   G+ P++ T+NT+       G   
Sbjct: 743 RG-IAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIG 801

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A+ VI EM+  G++PN  T  I+++GY K+    EALR    M   G  P    +N LI
Sbjct: 802 EADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLI 861

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
             F +    +   E+ + MK   V     TY  ++N WS      + + +  DM + G K
Sbjct: 862 SDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFK 921

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           P     S +++ + +     +A  LL T+ +
Sbjct: 922 PSKGTISSMSRAFSKPGMTWEARRLLKTLFK 952



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 172/371 (46%), Gaps = 62/371 (16%)

Query: 1   MGKFAEGKAFLQTDDKYQSGSTIVKKGWGQMIPA--KKNNPGEKKQLYSNSKPTDSQPQT 58
           +GKF+E K+FL+  +   +G    +  +  MI A  ++ N  +  +L +  K +  +P  
Sbjct: 587 LGKFSEAKSFLK--EMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPN- 643

Query: 59  HCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT 118
                        + + T L+  L+E G  ++A+ + N +   G  P+ +TY  +L A +
Sbjct: 644 -------------LITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACS 690

Query: 119 IQKR----------------------FNSI------HS-------IMSQVEENGMDPDSI 143
             +                       +N++      H        ++ ++   G+ PD+I
Sbjct: 691 GSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTI 750

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            FNA+I    +S +++ A  T+ +M   GL+P  +T+NTL+ G   AG+  E+  ++  M
Sbjct: 751 TFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEM 810

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            + G ++PN  TY++LV  +  + N  EA  +  +M + G  P   TYN++ + +A+ G 
Sbjct: 811 KKMG-LEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGM 869

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            +QA+E+  EM+  GV     T  I+++G+ K     E     + MKE G  P+      
Sbjct: 870 MNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPS------ 923

Query: 324 LIKGFVEIMDR 334
             KG +  M R
Sbjct: 924 --KGTISSMSR 932



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 82/170 (48%), Gaps = 5/170 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   L+  L   G+  EA  +   + + G +P+ +TY  L+      K+ N + ++  
Sbjct: 784 IATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILVTGYA--KKSNKVEALRL 841

Query: 132 QVE--ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             E    G  P +  +N++I+ F+++G M +A + F +MK  G+  T+STY+ L+ G+  
Sbjct: 842 YCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSK 901

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
                E   LL  M +E   KP+  T + + RA+       EA  ++  +
Sbjct: 902 LRNGTEVRILLKDM-KELGFKPSKGTISSMSRAFSKPGMTWEARRLLKTL 950


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 226/468 (48%), Gaps = 6/468 (1%)

Query: 57  QTHCSFC--MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL 114
           + HC F   M +     +     ++  L +  +  +A++I   +++ G  P L TY+ ++
Sbjct: 152 KAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLII 211

Query: 115 AALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT 174
             L   K  +    ++ Q+ E G  P+SI +N++I+ +S SG   E++  F +M   G+ 
Sbjct: 212 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVI 271

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN--ITEA 232
           PT    N+ I      G+  E+  + D M  +G  KP++ +Y+ ++  +    +  + + 
Sbjct: 272 PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLADV 330

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
            N+ + M   G+ P+   +N +  AYA+ G  D+A  +  +M++ G+ P+  T   +IS 
Sbjct: 331 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 390

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
            C+ G++ +AL     M + GV P+  ++  LI+G     +     E+++ M    + P 
Sbjct: 391 LCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPP 450

Query: 353 VITY-STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
            + Y S+I+N     G + + K+I D M + G +P+   ++ L +GY      E+A  LL
Sbjct: 451 GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALL 510

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M   G  PN  I+ T++ G+C +G +D A+ VF  M   GV P    +  ++ G  +A
Sbjct: 511 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQA 570

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           R+   A+++   M   G      T+ ++         T EA  +L K+
Sbjct: 571 RRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 618



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/433 (24%), Positives = 201/433 (46%), Gaps = 74/433 (17%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLA--ALTIQKRFNSIHS 128
           TV +    +++L + G+  EA+ IF++++  G KP +++Y+T+L   A         +H+
Sbjct: 273 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 332

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           I + +   G+ P+   FN +INA++  G M++AM  F  M+  G+ P T T+ T+I    
Sbjct: 333 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 392

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN----------------------- 225
             G+ ++++   + M   G V P+   Y  L++  CN                       
Sbjct: 393 RIGRLDDALHKFNHMVDIG-VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 451

Query: 226 -------------EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
                        E  + E  ++M  M  +G +P+VVT+N++   Y   G  ++A  ++ 
Sbjct: 452 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 511

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG----- 327
            M   G++PN    G ++ GYCK G+I +AL   R M   GV P  V++++++ G     
Sbjct: 512 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 571

Query: 328 --------FVEIMD-------------------RDGVDEVLALMKEF---RVNPDVITYS 357
                   F E+++                    +  DE   L+++     V  D+IT++
Sbjct: 572 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFN 631

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++A    G   + KE+FD +   G+ P+   YS++    ++E+  E+A+ L +++ +S
Sbjct: 632 IVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKS 691

Query: 418 GFHPNVVIFTTII 430
           G   +  +   I+
Sbjct: 692 GHASDSRLLNHIV 704



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 202/456 (44%), Gaps = 40/456 (8%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P++ TY  L+       R +   +I+ ++ +NG+ PD  F  ++I  F + G +++A   
Sbjct: 98  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDD-FSYSLIYGFVKDGEVDKAHCL 156

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F +M E G+ P     N++IK      + +++  ++  M   G + P+L TY++++   C
Sbjct: 157 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG-IAPDLFTYSLIIDGLC 215

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
             K + +A  V+ +M  +G +P+ +TYN++   Y+ +G  +++  V  +M   GV P   
Sbjct: 216 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 275

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR--DGVDEVLA 342
            C   I    K G+  EA     +M   G  P+++ ++ ++ G+    D     V  +  
Sbjct: 276 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 335

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA-------------- 388
           LM    + P+   ++ ++NA++  G MDK   IF+DM   G+ PD               
Sbjct: 336 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 395

Query: 389 ---------------------HAYSILAKGYVREQEPEKAEELLMTMIESGFHP-NVVIF 426
                                  Y  L +G     E  KA+EL+  M+     P  V  F
Sbjct: 396 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 455

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           ++II+  C +G +    ++ D M + G  PN+ TF +LM GY        A  +L  M +
Sbjct: 456 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 515

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            G+ P    +  L +     G   +A  +   + +K
Sbjct: 516 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 551



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 99/223 (44%), Gaps = 1/223 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   + G+  +A  +F +++  G KP+ V Y+ +L  L   +R  +   +  ++ E+G
Sbjct: 528 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 587

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
                  +  V+     +   +EA     K+    +     T+N +I      G+ +E+ 
Sbjct: 588 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 647

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L D +S  G V PN++TY++++     E++  EA N+   +  SG   D    N I   
Sbjct: 648 ELFDAISTYGLV-PNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 706

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
                E  +A   +  +  N +     T  ++ S + +EG IK
Sbjct: 707 LLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMIK 749


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 218/447 (48%), Gaps = 8/447 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T  +  L   GK  EA  IF  + + G  P LVTYT L+ AL    +  +   +  
Sbjct: 262 VYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFV 321

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++ NG  PD + +  +++ F++ G+++   + + +M+  G  P   T+  L+     A 
Sbjct: 322 KMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKAR 381

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+    D+M ++G + PNL TYN L+        I +A  ++  M + G++P   TY
Sbjct: 382 DFDEAFATFDVMRKQG-ILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTY 440

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T    + ++GE  +A E   +M+  G+ PN   C   +    + G+++EA      ++E
Sbjct: 441 ITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRE 500

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGF 368
            G+ P+ V +N+++K + ++     VDE + L+ E   N   PDVI  ++++++   AG 
Sbjct: 501 NGLAPDSVTYNMMMKCYSKV---GQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGR 557

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D+  ++FD M    + P    Y+ L  G  +E   +KA EL  +MI     PN + F T
Sbjct: 558 VDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNT 617

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++  +C +  ++ A+++F KM      P++ T+ T+++G  +  +   A      +K   
Sbjct: 618 LLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK-S 676

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRI 515
           +HP   T   L       G   +A  I
Sbjct: 677 MHPDHVTICTLLPGLVKCGQIGDAISI 703



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 215/446 (48%), Gaps = 1/446 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L++ LI+ G   EA  ++  ++  G KPSL TY+ L+ AL  ++    +  ++ ++
Sbjct: 194 SYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEM 253

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+ G+ P+   F   I     +G ++EA + F +M + G  P   TY  LI     AG+ 
Sbjct: 254 EDLGLRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQL 313

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E + +L   M   G+ KP+   Y  L+  + +  ++        +M A G  PDVVT+  
Sbjct: 314 ENAKELFVKMKANGH-KPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTI 372

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     +  + D+A      M   G+ PN  T   +I G  + G+I++AL+   TM+  G
Sbjct: 373 LVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVG 432

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V P    +   I  F +  +     E    MK   + P+++  +  + + +  G + + K
Sbjct: 433 VQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F+ + + G+ PD+  Y+++ K Y +  + ++A  LL  MI +G  P+V++  ++I   
Sbjct: 493 TMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G +D A ++FD+M +  +SP + T+ TL+ G  +  +  +A E+ + M      P  
Sbjct: 553 YKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNT 612

Query: 494 STFLLLAEARRATGLTKEAKRILSKI 519
            +F  L +        + A ++ SK+
Sbjct: 613 ISFNTLLDCFCKNDEVELALKMFSKM 638



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 113/481 (23%), Positives = 223/481 (46%), Gaps = 39/481 (8%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           + SL E G+ +EA+ +FN L E G  P  VTY  ++   +   + +   +++S++  NG 
Sbjct: 479 LYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGC 538

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           +PD I  N++I++  ++G ++EA   F +MK+  L+PT  TYNTL+ G G  G+ +++++
Sbjct: 539 EPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIE 598

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           L + M  +    PN  ++N L+  +C    +  A  +  KM     KPDV+TYNT+    
Sbjct: 599 LFESMIXK-KCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGL 657

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART-MKEYGVHPN 317
            +  + + A     +++ + + P+  T   ++ G  K G+I +A+  AR  M +     N
Sbjct: 658 IKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVN 716

Query: 318 LVIFNLLIKG------------FVEIMDRDGV---DEVLA-------------------- 342
              +  L+ G            F E +  +G+   D  L                     
Sbjct: 717 RSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFD 776

Query: 343 -LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
              K+  ++P + +Y+ ++       + +K  ++F DM   G  PDA  +++L   + + 
Sbjct: 777 KFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKS 836

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            +  +  EL   MI     P+ + +  +IS      ++D+A++ F  +      P  +T+
Sbjct: 837 GKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTY 896

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             L+ G ++  +   A  + + M  +G  P  + F +L       G T+ A ++  ++ N
Sbjct: 897 GPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVN 956

Query: 522 K 522
           +
Sbjct: 957 E 957



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 205/453 (45%), Gaps = 40/453 (8%)

Query: 71  TVRSMTKLMNSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           TV   T+  N ++E      K ++  A+F  + +   +  L TY T+  AL+I+     +
Sbjct: 117 TVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKKIIRRDLDTYLTIFKALSIRGGLRQM 176

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
            ++++++ + G   ++  +N +I+   +SG   EA++ + +M   GL P+  TY+ L+  
Sbjct: 177 TTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGLKPSLKTYSALMVA 236

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
            G     E  + LL  M   G ++PN+ T+ + +R       I EA+ +  +M   G  P
Sbjct: 237 LGKKRDSEMVMVLLKEMEDLG-LRPNVYTFTICIRVLGRAGKIDEAYEIFRRMDDEGCGP 295

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           D+VTY  +  A    G+ + A+E+ V+M+ NG +P+                        
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ----------------------- 332

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
                       VI+  L+  F +  D D   E  + M+     PDV+T++ +++    A
Sbjct: 333 ------------VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKA 380

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
              D+    FD M K GI P+ H Y+ L  G +R    E A +LL TM   G  P    +
Sbjct: 381 RDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTY 440

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            T I  +   G   +A+E F+KM   G+ PN+      ++  +E  +   A+ +   ++ 
Sbjct: 441 ITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRE 500

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            G+ P   T+ ++ +     G   EA  +LS++
Sbjct: 501 NGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEM 533



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/362 (26%), Positives = 180/362 (49%), Gaps = 2/362 (0%)

Query: 136  NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLIKGYGIAGKPE 194
            NG+  +  F   ++    +      A   F K  K+ G++PT ++YN LI         E
Sbjct: 746  NGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTE 805

Query: 195  ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            ++  L   M   G   P+  T+N+L+        ITE + +  +M +   KPD +TYN +
Sbjct: 806  KAWDLFKDMKNVG-CAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIV 864

Query: 255  ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             ++ A++   D+A +   ++  +  +P  RT G +I G  K G+++EA+R    M +YG 
Sbjct: 865  ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGC 924

Query: 315  HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
             PN  IFN+LI G+ +I D +   ++   M    + PD+ +Y+ +++    AG +D+   
Sbjct: 925  KPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALY 984

Query: 375  IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
             F+++   G+ PD  AY+ +  G  + Q  E+A  L   M   G  P++  + +++    
Sbjct: 985  YFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLG 1044

Query: 435  SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
              G +++A  +++++   G+ P++ T+  L+ GYS +  P  A  + + M   G +P   
Sbjct: 1045 LAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIG 1104

Query: 495  TF 496
            T+
Sbjct: 1105 TY 1106



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 88/353 (24%), Positives = 163/353 (46%), Gaps = 36/353 (10%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            T+ S   L+  L+E    ++A  +F ++   G  P   T+  LLA      +   +  + 
Sbjct: 787  TLASYNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELY 846

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++      PD+I +N VI++ ++S N+++A+D F+ +  S   PT  TY  LI G    
Sbjct: 847  KEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKV 906

Query: 191  GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            G+ EE+++L + MS  G  KPN   +N+L+  +    +   A  +  +M   G++PD+ +
Sbjct: 907  GRLEEAMRLFEEMSDYG-CKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKS 965

Query: 251  YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            Y  +       G  D+A     E++  G+ P+      II+G  K  +++EAL     M+
Sbjct: 966  YTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMR 1025

Query: 311  EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              G+ P                                   D+ TY+++M     AG ++
Sbjct: 1026 NRGIVP-----------------------------------DLYTYNSLMLNLGLAGMVE 1050

Query: 371  KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
            + K +++++  AG++PD   Y+ L +GY   + PE A  +   M+  G +PN+
Sbjct: 1051 QAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNI 1103



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/363 (25%), Positives = 170/363 (46%), Gaps = 2/363 (0%)

Query: 161 AMDTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           A+  F+ + E   +  TT T N +++   +  K E+   + + M ++  ++ +L TY  +
Sbjct: 105 ALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAVFEFMQKK-IIRRDLDTYLTI 163

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
            +A      + +   V++KM  +G   +  +YN +     Q+G   +A EV   M   G+
Sbjct: 164 FKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEALEVYRRMVSEGL 223

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           +P+ +T   ++    K+   +  +   + M++ G+ PN+  F + I+        D   E
Sbjct: 224 KPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVLGRAGKIDEAYE 283

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +   M +    PD++TY+ +++A   AG ++  KE+F  M   G KPD   Y  L   + 
Sbjct: 284 IFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFN 343

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
              + +  +E    M   G+ P+VV FT ++   C     D A   FD M + G+ PNL 
Sbjct: 344 DFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLH 403

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+ TL+ G   A +   A ++L  M++ GV P   T++   +    +G T +A     K+
Sbjct: 404 TYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKM 463

Query: 520 KNK 522
           K K
Sbjct: 464 KAK 466



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 102/488 (20%), Positives = 213/488 (43%), Gaps = 41/488 (8%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            TV +   L++ L + G+ Q+A  +F ++I     P+ +++ TLL              + 
Sbjct: 576  TVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMF 635

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            S++      PD + +N VI    +   +  A   F ++K+S + P   T  TL+ G    
Sbjct: 636  SKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKKS-MHPDHVTICTLLPGLVKC 694

Query: 191  GKPEESVKLL-----------------DLM---------------SREGNVKPNLRTYNV 218
            G+  +++ +                  DLM               + E  +    R  + 
Sbjct: 695  GQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSF 754

Query: 219  L---VRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
            L   VR  C  K    A+ +  K     G+ P + +YN +     +    ++A ++  +M
Sbjct: 755  LIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDM 814

Query: 275  EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
            ++ G  P+  T  ++++ + K GKI E     + M      P+ + +N++I    +  + 
Sbjct: 815  KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNL 874

Query: 335  D-GVDEVLALMK-EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
            D  +D    L+  +FR  P   TY  +++  +  G +++   +F++M   G KP+   ++
Sbjct: 875  DKALDFFYDLVSSDFRPTPR--TYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFN 932

Query: 393  ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            IL  GY +  + E A +L   M+  G  P++  +T ++   C  G +D A+  F+++   
Sbjct: 933  ILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKST 992

Query: 453  GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            G+ P+   +  ++ G  ++++   A  +   M+  G+ P   T+  L       G+ ++A
Sbjct: 993  GLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQA 1052

Query: 513  KRILSKIK 520
            KR+  +++
Sbjct: 1053 KRMYEELQ 1060



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 52/174 (29%), Positives = 95/174 (54%), Gaps = 1/174 (0%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L+N   + G  + A  +F  ++  G +P L +YT L+  L +  R +      ++++  G
Sbjct: 934  LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            +DPD I +N +IN   +S  MEEA+  + +M+  G+ P   TYN+L+   G+AG  E++ 
Sbjct: 994  LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAK 1053

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
            ++ + +   G ++P++ TYN L+R +   +N   A+ V   M   G  P++ TY
Sbjct: 1054 RMYEELQLAG-LEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1202

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 220/449 (48%), Gaps = 1/449 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S+T L++ L++  + +    +F N++E   +PS   Y   + A            + +++
Sbjct: 519 SLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRM 578

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + + + P    +N +I+   +   M++A   F +M    L P+  TYNTLI GY   G P
Sbjct: 579 KHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNP 638

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E+S K+ + M +  N++P+L T+N L++       + +A NV+ +M   G  PD  T++ 
Sbjct: 639 EKSFKVRERM-KADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSI 697

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y+ N +AD A  V      +G++ N  TC I+++  CKEG+I++A          G
Sbjct: 698 LFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKG 757

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + PN V++N +I G+    D  G    +  M++  + PD + Y+ ++  +   G M+  +
Sbjct: 758 LVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAE 817

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           +  + M   G+ P    Y+IL  GY R+ E +K  +LL  M ++G  PNVV + T+I+  
Sbjct: 818 QEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCL 877

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C    +  A  V   M + GVSPN++ +  L+ G     +   A    + M   G+    
Sbjct: 878 CKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNL 937

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK 522
            T+  L +     G   EA+ +L +I  K
Sbjct: 938 VTYNTLIDGLSMNGKLAEAEDMLLEISRK 966



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 209/417 (50%), Gaps = 7/417 (1%)

Query: 87   KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
            K   A  ++   ++ G K +  T + LL AL  + +      I+ +    G+ P+ + +N
Sbjct: 707  KADAALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYN 766

Query: 147  AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
             +I+ +S  G++  A      M++ G+ P    YN LI+ +   G  E + + ++ M  +
Sbjct: 767  TMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLK 826

Query: 207  GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            G V P++ TYN+L+  +  +    + ++++ +M  +G  P+VV+Y T+     +  +  +
Sbjct: 827  G-VSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLE 885

Query: 267  AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
            A+ V  +ME  GV PN R   ++I G C +GKI++A RF+  M + G+  NLV +N LI 
Sbjct: 886  AQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLID 945

Query: 327  GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
            G          +++L  +    + PDV TY+++++ +  AG + +C  ++++M  +GIKP
Sbjct: 946  GLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKP 1005

Query: 387  DAHAYSILAKGYVREQEPEKAEELLMTMI-ESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
                Y +L     +E       EL   +  E    P+++++  ++  +   G MD+A  +
Sbjct: 1006 TLKTYHLLISLCTKE-----GIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNL 1060

Query: 446  FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
              +M E  +  +  T+ +L+ G  +  +      ++  MKA  + P+  T+ ++ + 
Sbjct: 1061 QKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKG 1117



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 212/429 (49%), Gaps = 1/429 (0%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            TV     L++ L +  + ++A+ +F+ ++     PSL+TY TL+              + 
Sbjct: 586  TVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVR 645

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +++ + ++P  I FN ++    ++G +E+A +   +MK+ G  P   T++ L  GY   
Sbjct: 646  ERMKADNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSN 705

Query: 191  GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
             K + ++ + +     G +K N  T ++L+ A C E  I +A  ++ +  A G+ P+ V 
Sbjct: 706  DKADAALGVYETAVDSG-LKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVL 764

Query: 251  YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            YNT+   Y++ G+   A   I  ME  G++P+      +I  +C+ G ++ A +    MK
Sbjct: 765  YNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMK 824

Query: 311  EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              GV P++  +N+LI G+    + D   ++L  M++    P+V++Y T++N       + 
Sbjct: 825  LKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLL 884

Query: 371  KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
            + + +  DM   G+ P+   Y++L  G   + + E A      M + G   N+V + T+I
Sbjct: 885  EAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLI 944

Query: 431  SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
             G   +G +  A ++  ++   G+ P++ T+ +L+ GY  A    R   + + MK  G+ 
Sbjct: 945  DGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIK 1004

Query: 491  PQKSTFLLL 499
            P   T+ LL
Sbjct: 1005 PTLKTYHLL 1013



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 206/450 (45%), Gaps = 47/450 (10%)

Query: 64   MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
            MN  +C      + L+N+L + G+ ++A+ I    +  G  P+ V Y T++   + +   
Sbjct: 725  MNAYTC------SILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDL 778

Query: 124  NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                  +  +E+ GM PD + +N +I  F E G+ME A     KMK  G++P+  TYN L
Sbjct: 779  VGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNIL 838

Query: 184  IKGYGIAGKPEESVKLLDLMSREGN----------------------------------V 209
            I GYG   + ++   LL  M   G                                   V
Sbjct: 839  IGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 898

Query: 210  KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
             PN+R YN+L+   C++  I +A+    +M   G++ ++VTYNT+    + NG+  +AE+
Sbjct: 899  SPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAED 958

Query: 270  VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
            +++E+   G++P+  T   +ISGY   G ++  +     MK  G+ P L  ++LLI    
Sbjct: 959  MLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLIS--- 1015

Query: 330  EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
             +  ++G++    +  E  + PD++ Y+ +++ ++  G MDK   +   M +  I  D  
Sbjct: 1016 -LCTKEGIELTKKIFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKT 1074

Query: 390  AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
             Y+ L  G ++  +  +   L+  M      P    +  I+ G C       A   + +M
Sbjct: 1075 TYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMKDYMGAYVWYREM 1134

Query: 450  CEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
             E G+  ++   + L+ G  E    WR++E
Sbjct: 1135 QEKGLLLDVCIGDELVSGLKEE---WRSKE 1161



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 147/328 (44%), Gaps = 1/328 (0%)

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           E+  L   +  EG + P+  +  +L+      K      NV   +  S  +P    Y   
Sbjct: 500 EAADLFFALRNEG-IFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKA 558

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             A  +  +  +  E+   M+H+ + P      ++I G CK  ++K+A +    M    +
Sbjct: 559 IQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARRL 618

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P+L+ +N LI G+ +  + +   +V   MK   + P +IT++T++     AG ++  + 
Sbjct: 619 LPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAEN 678

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +  +M   G  PDA  +SIL  GY    + + A  +  T ++SG   N    + +++  C
Sbjct: 679 VLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNALC 738

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +G +++A E+  +    G+ PN   + T++ GYS       A   +  M+  G+ P   
Sbjct: 739 KEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDHL 798

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
            +  L       G  + A++ ++K+K K
Sbjct: 799 AYNCLIRTFCELGDMENAEQEVNKMKLK 826



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/280 (20%), Positives = 124/280 (44%), Gaps = 1/280 (0%)

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           +++  +K D  +Y  ++    ++    +A ++   + + G+ P+  +  +++    K  +
Sbjct: 474 LSSPSLKHDF-SYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQ 532

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
            +  +     + E    P+  ++   I+  V++ D     E+   MK  R++P V  Y+ 
Sbjct: 533 FRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNV 592

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++       M   +++FD+M    + P    Y+ L  GY ++  PEK+ ++   M    
Sbjct: 593 LIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADN 652

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P+++ F T++ G    G ++ A  V  +M + G  P+  TF  L  GYS   +   A 
Sbjct: 653 IEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAAL 712

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            + +     G+     T  +L  A    G  ++A+ IL +
Sbjct: 713 GVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGR 752


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/415 (27%), Positives = 211/415 (50%), Gaps = 12/415 (2%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G K SL++   LL+ L  +     +  +  ++ +  ++ + I FN V+N   + G +  A
Sbjct: 115 GFKLSLISCNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRA 174

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGY---GIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
            D    MK  G++P   TYNTLI GY   G  GK  ++  +L  M  +G + PN  TYN+
Sbjct: 175 GDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKG-ICPNEVTYNI 233

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L+  +C ++N++ A  V  +M   G++P+VVTYN +      +G+ D+A  +  +M  + 
Sbjct: 234 LIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSD 293

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-V 337
           ++PN  T  ++I+G+CK   + EA+     M++ GV PN + +  LI  +     +DG +
Sbjct: 294 LEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYC----KDGRM 349

Query: 338 DEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           ++  AL   M +  + P+V TY+ ++      G +   + + ++M    +  D   Y+IL
Sbjct: 350 EDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNIL 409

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
                ++ E  KA +LL  M E G +P+ V + T++ G+C +G++  A+ V  +M   G 
Sbjct: 410 IDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGK 469

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
             N+ T   L+ G+    +   A  +L  M   G+ P ++T+ ++ E     G  
Sbjct: 470 QANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFV 524



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 181/361 (50%), Gaps = 4/361 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH---S 128
           V S   ++N L + GK   A  +  ++   G  P+++TY TL+       R   ++   +
Sbjct: 155 VISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADA 214

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           I+ ++   G+ P+ + +N +I+ F +  N+  AM  F +M+  GL P   TYN LI G  
Sbjct: 215 ILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLC 274

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             GK +E+V L D M    +++PN+ T+NVL+  +C  K + EA N+ + M   G+ P+ 
Sbjct: 275 SDGKVDEAVALRDQMV-SSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNA 333

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           +TY T+  AY ++G  + A  +   M   G+ P   T   +I+G C++G +K A      
Sbjct: 334 MTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNE 393

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M    +  ++V +N+LI    +  +     ++L  M E  +NP  +TY+T+M+ +   G 
Sbjct: 394 MVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGN 453

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +     +   M + G + +   +++L KG+  +   E A  LL  M+E G  PN   +  
Sbjct: 454 LRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEI 513

Query: 429 I 429
           I
Sbjct: 514 I 514



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 192/392 (48%), Gaps = 18/392 (4%)

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           +SI  + ++ AF  +  +    + F +  + G   +  + N L+ G       E     +
Sbjct: 84  NSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGL----VKESENGDM 139

Query: 201 DLMSRE---GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           + + RE     ++ N+ ++N++V   C    +  A +V+  M   G+ P+V+TYNT+   
Sbjct: 140 EFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDG 199

Query: 258 YAQNGEADQ---AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
           Y + G   +   A+ ++ EM   G+ PN  T  I+I G+CK+  +  A+R    M+  G+
Sbjct: 200 YCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGL 259

Query: 315 HPNLVIFNLLIKGFVEIMDRDG-VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMD 370
            PN+V +N+LI G       DG VDE +AL   M    + P+V+T++ ++N +     ++
Sbjct: 260 RPNVVTYNILINGLCS----DGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVN 315

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +F+DM K G+ P+A  Y+ L   Y ++   E A  L   MI+ G  P V  +  +I
Sbjct: 316 EAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLI 375

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G C  G +  A  + ++M    +S ++ T+  L+    +  +  +A ++L  M   G++
Sbjct: 376 AGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLN 435

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+  L +     G  + A  + ++++ K
Sbjct: 436 PSHVTYNTLMDGYCREGNLRAALIVRTRMERK 467



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 81/279 (29%), Positives = 147/279 (52%), Gaps = 1/279 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A  +F  +   G +P++VTY  L+  L    + +   ++  Q+  + ++P+ +  N +IN
Sbjct: 247 AMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLIN 306

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            F ++  + EA++ F  M++ G+ P   TY TLI  Y   G+ E++  L ++M   G + 
Sbjct: 307 GFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRG-IF 365

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P + TYN L+   C + ++  A ++M++M +  +  DVVTYN +  +  + GE+ +A ++
Sbjct: 366 PEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKL 425

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + EM   G+ P+  T   ++ GYC+EG ++ AL     M+  G   N+V  N+LIKGF  
Sbjct: 426 LDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCL 485

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
               +  + +L  M E  + P+  TY  I       GF+
Sbjct: 486 KGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFV 524



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/338 (24%), Positives = 163/338 (48%), Gaps = 17/338 (5%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  +A AI   ++  G  P+ VTY  L+      +  +    +  +++  G+ P+ + +
Sbjct: 207 GKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTY 266

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +IN     G ++EA+    +M  S L P   T+N LI G+       E++ L + M +
Sbjct: 267 NILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEK 326

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G V PN  TY  L+ A+C +  + +A+ + + M   G+ P+V TYN +     + G+  
Sbjct: 327 QG-VDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVK 385

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A  ++ EM    +  +  T  I+I   CK+G+ ++A++    M E G++P+ V +N L+
Sbjct: 386 AARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLM 445

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G+    +      V   M+      +V+T++ ++  +   G ++    + ++M + G+ 
Sbjct: 446 DGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLV 505

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
           P+   Y I     ++E+           M+E GF P++
Sbjct: 506 PNRTTYEI-----IKEE-----------MMEKGFVPDI 527



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/327 (25%), Positives = 163/327 (49%), Gaps = 6/327 (1%)

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           ++LV A+     I   +    +    G K  +++ N + +   +  E    E V  EM  
Sbjct: 89  DMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDMEFVYREMIK 148

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
             ++ N  +  I+++G CK GK+  A      MK +GV PN++ +N LI G+ + M R G
Sbjct: 149 RKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCK-MGRIG 207

Query: 337 ----VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
                D +L  M    + P+ +TY+ +++ +     +     +F +M + G++P+   Y+
Sbjct: 208 KMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYN 267

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           IL  G   + + ++A  L   M+ S   PNVV    +I+G+C + +++ AI +F+ M + 
Sbjct: 268 ILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQ 327

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           GV PN  T+ TL+  Y +  +   A  +  +M   G+ P+ ST+  L       G  K A
Sbjct: 328 GVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAA 387

Query: 513 KRILSKIKNKERTNEMEAEEDIPVESL 539
           + +++++ +K+ + ++    +I ++SL
Sbjct: 388 RSLMNEMVSKKLSADV-VTYNILIDSL 413



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 140/272 (51%), Gaps = 7/272 (2%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++  R  V +   L+N L   GK  EA A+ + ++    +P++VT+  L+      K 
Sbjct: 254 MQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKT 313

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            N   ++ + +E+ G+DP+++ +  +I+A+ + G ME+A   +  M + G+ P  STYN 
Sbjct: 314 VNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNC 373

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G    G  + +  L++ M  +  +  ++ TYN+L+ + C +    +A  ++ +M   
Sbjct: 374 LIAGLCRKGDVKAARSLMNEMVSK-KLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEK 432

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P  VTYNT+   Y + G    A  V   ME  G Q N  T  ++I G+C +G++++A
Sbjct: 433 GLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDA 492

Query: 303 LRFARTMKEYGVHPNLVIFNLLI-----KGFV 329
                 M E G+ PN   + ++      KGFV
Sbjct: 493 NGLLNEMLERGLVPNRTTYEIIKEEMMEKGFV 524



 Score = 85.1 bits (209), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 60/279 (21%), Positives = 117/279 (41%), Gaps = 38/279 (13%)

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
           + M  +    N     +++  + +  KI       +   +YG   +L+  N L+ G V+ 
Sbjct: 74  ISMSGDSFCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKE 133

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM------------ 379
            +   ++ V   M + ++  +VI+++ ++N     G +++  ++ +DM            
Sbjct: 134 SENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITY 193

Query: 380 -------------GKA-------------GIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
                        GK              GI P+   Y+IL  G+ +++    A  +   
Sbjct: 194 NTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGE 253

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M   G  PNVV +  +I+G CSDG +D A+ + D+M    + PN+ T   L+ G+ + + 
Sbjct: 254 MQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKT 313

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
              A  +   M+  GV P   T+  L +A    G  ++A
Sbjct: 314 VNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDA 352


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 219/447 (48%), Gaps = 9/447 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIMSQ 132
           + T L+  +   GK  EA  +F+ +I  G +P +VTY TL+  L  +     +I  + S 
Sbjct: 133 TFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 192

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           V++N   P+   +N +I++  +   + EA + F +M   G++P   TYN+LI       +
Sbjct: 193 VQKN-CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +    LL+ M  +  + P++ ++N +V A C E  +TEA +V+ KM   G++P+VVTY 
Sbjct: 252 WKHVATLLNEMV-DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYT 310

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +   +    E D+A +V   M   G  PN  +   +I+GYCK  +I +A+     M   
Sbjct: 311 ALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQ 370

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFM 369
            + P+ V ++ LI G   +   + + + +AL  E       P+++TY  +++      ++
Sbjct: 371 ELIPDTVTYSTLIHGLCHV---ERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYL 427

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +   +   +  + + PD    +I   G  R  E E A +L   +   G  P+V  ++ +
Sbjct: 428 AEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIM 487

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I+G C  G +D A ++F +M E+G + N   + T+  G+    +  RA ++LQ M A G 
Sbjct: 488 INGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGF 547

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRIL 516
               ST  L  +     GL +  K+IL
Sbjct: 548 SADASTMTLFVKMLSDDGLDQSLKQIL 574



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 205/443 (46%), Gaps = 1/443 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL+ S+ +        ++ + +   G  P++ T   L+ +     R     S+++++ + 
Sbjct: 66  KLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKL 125

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  PD+  F  +I      G + EA+  F KM   G  P   TY TLI G    G    +
Sbjct: 126 GHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAA 185

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++LL  M ++ N +PN+  YN ++ + C ++ +TEA+N+  +M   G+ PD+ TYN++  
Sbjct: 186 IRLLGSMVQK-NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIH 244

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A     E      ++ EM  + + P+  +   ++   CKEGK+ EA      M + GV P
Sbjct: 245 ALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP 304

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N+V +  L+ G   + + D   +V   M      P+VI+Y+T++N +     +DK   +F
Sbjct: 305 NVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLF 364

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M +  + PD   YS L  G    +  + A  L   M+     PN+V +  ++   C +
Sbjct: 365 GEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKN 424

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             +  A+ +   +    + P+++     + G   A +   A ++   + + G+ P   T+
Sbjct: 425 RYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTY 484

Query: 497 LLLAEARRATGLTKEAKRILSKI 519
            ++       GL  EA ++  ++
Sbjct: 485 SIMINGLCRRGLLDEASKLFREM 507



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 197/428 (46%), Gaps = 1/428 (0%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           FN ++     PS V +  LL ++   K  +++ S+  Q++  G+ P+    + +IN+F  
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
              +  A     K+ + G  P T+T+ TLI+G  + GK  E++ L D M  EG  +P++ 
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEG-FRPDVV 167

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TY  L+   C   N + A  ++  M     +P+V  YNTI  +  ++ +  +A  +  EM
Sbjct: 168 TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G+ P+  T   +I   C   + K        M +  + P++V FN ++    +    
Sbjct: 228 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
               +V+  M +  V P+V+TY+ +M+       MD+  ++FD M   G  P+  +Y+ L
Sbjct: 288 TEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTL 347

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             GY + Q  +KA  L   M      P+ V ++T+I G C    +  AI +F +M     
Sbjct: 348 INGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 407

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            PNL T+  L+    + R    A  +L+ ++   + P      +  +     G  + A+ 
Sbjct: 408 IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARD 467

Query: 515 ILSKIKNK 522
           + S + +K
Sbjct: 468 LFSNLSSK 475



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 193/382 (50%), Gaps = 3/382 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +++C+  V +   +++SL +  +  EA  +F+ ++  G  P + TY +L+ AL     
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +  + ++++++ ++ + PD + FN V++A  + G + EA D   KM + G+ P   TY  
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ G+ +  + +E+VK+ D M  +G   PN+ +YN L+  +C  + I +A  +  +M   
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKG-CMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQ 370

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            + PD VTY+T+            A  +  EM      PN  T  I++   CK   + EA
Sbjct: 371 ELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEA 430

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           +   + ++   + P++ + N+ I G     + +   ++ + +    + PDV TYS ++N 
Sbjct: 431 MALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMING 490

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G +D+  ++F +M + G   +   Y+ + +G++R  E  +A +LL  M+  GF  +
Sbjct: 491 LCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSAD 550

Query: 423 VVIFTTIISGWCSDGSMDRAIE 444
               T  +     DG +D++++
Sbjct: 551 ASTMTLFVKMLSDDG-LDQSLK 571



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/305 (26%), Positives = 145/305 (47%), Gaps = 1/305 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   ++++L + GK  EA  + + +I+ G +P++VTYT L+    +    +    +  
Sbjct: 271 VVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFD 330

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  P+ I +N +IN + +   +++AM  F +M    L P T TY+TLI G     
Sbjct: 331 TMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVE 390

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + ++++ L   M     + PNL TY +L+   C  + + EA  ++  +  S + PD+   
Sbjct: 391 RLQDAIALFHEMVACSQI-PNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVN 449

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N       + GE + A ++   +   G+QP+  T  I+I+G C+ G + EA +  R M E
Sbjct: 450 NIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDE 509

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G   N  I+N + +GF+   +     ++L  M     + D  T +  +   S  G    
Sbjct: 510 NGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQS 569

Query: 372 CKEIF 376
            K+I 
Sbjct: 570 LKQIL 574



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/354 (23%), Positives = 141/354 (39%), Gaps = 43/354 (12%)

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK---------- 295
           P  V +N + T+ A+         +  +M+  G+ PN  T  I+I+ +C           
Sbjct: 59  PSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSV 118

Query: 296 -------------------------EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
                                    EGKI EAL     M   G  P++V +  LI G  +
Sbjct: 119 LAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCK 178

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           + +      +L  M +    P+V  Y+TI+++      + +   +F +M   GI PD   
Sbjct: 179 VGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFT 238

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ L        E +    LL  M++S   P+VV F T++   C +G +  A +V DKM 
Sbjct: 239 YNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMI 298

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           + GV PN+ T+  LM G+    +   A ++   M   G  P   ++  L           
Sbjct: 299 QRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRID 358

Query: 511 EAKRILSKIKNKERTNEMEAEEDI-----PVESLE---RLYHKEATTASYPNLL 556
           +A  +  ++  +E   +      +      VE L+    L+H+    +  PNL+
Sbjct: 359 KAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLV 412



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/157 (22%), Positives = 63/157 (40%)

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           DG       M   +  P  + ++ ++ + +          +   M   GI P+ +   IL
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
              +        A  +L  +++ G  P+   FTT+I G   +G +  A+ +FDKM   G 
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGF 162

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            P++ T+ TL+ G  +      A  +L  M      P
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQP 199


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 211/446 (47%), Gaps = 8/446 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T L+  L   G+  EA  +F+ +I  G +P +V Y TL+  L      ++   ++  +
Sbjct: 146 SFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSM 205

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+    PD + +  +I++  +     +A + F +M   G++P   T N+L+      G+ 
Sbjct: 206 EKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEW 265

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +    LL+ M  +  + PN  +   +V A C E  + +A +V+  M  SG++PDVVTY  
Sbjct: 266 KHVNTLLNEMV-DSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTA 324

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +    E D+A +V   M H G  PN  +   +I+GYCK  ++ +A+     M    
Sbjct: 325 LIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQK 384

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMD 370
           + PN V +N LI G   +     + + +AL +E       PD++TY  +++       +D
Sbjct: 385 LIPNTVTYNTLIHGLCHV---GRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLD 441

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +   +  + + PD   Y+I+  G  R  E E A +L   +   G  PNV  +  + 
Sbjct: 442 KAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMT 501

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C  G +D A ++F +M E+  S +  T+ T+  G+    +  RA ++L+ M A G  
Sbjct: 502 HGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFS 561

Query: 491 PQKSTFLLLAEARRATGLTK-EAKRI 515
              ST  LL       GL + EA ++
Sbjct: 562 CDVSTTTLLVGMLSDDGLDQSEAHKL 587



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/434 (24%), Positives = 206/434 (47%), Gaps = 1/434 (0%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            +A + FN ++     PS+V +  +L ++T  KR++++ S+  +++  G+  +    N +
Sbjct: 56  DDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVL 115

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           IN+F     +  A     K+ + G  P T+++ TLIKG  + G+  E++ L D M  EG 
Sbjct: 116 INSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEG- 174

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            +P++  Y  L+   C   + + A  ++  M     +PDVV Y T+  +  ++ +  QA 
Sbjct: 175 FQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAF 234

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            +  EM   G+ PN  TC  ++   C  G+ K        M +  + PN +    ++   
Sbjct: 235 NLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDAL 294

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +        +V+ +M +  V PDV+TY+ +++       MD+  ++FD M   G  P+ 
Sbjct: 295 CKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNV 354

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
            +Y+ L  GY + +  +KA  L   M      PN V + T+I G C  G +  AI +F +
Sbjct: 355 FSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFRE 414

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M   G  P+L T+  L+    +     +A  +L+ ++   + P    + ++ +     G 
Sbjct: 415 MVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGE 474

Query: 509 TKEAKRILSKIKNK 522
            ++A+ + S + +K
Sbjct: 475 LEDARDLFSNLSSK 488



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/446 (22%), Positives = 206/446 (46%), Gaps = 1/446 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++    K++ S+ +  +     ++   +   G   ++ T   L+ +     R N   S++
Sbjct: 73  SIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVL 132

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++ + G  PD+  F  +I      G + EA+  F KM   G  P    Y TLI G    
Sbjct: 133 AKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKT 192

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    +++LL  M + GN +P++  Y  L+ + C ++  T+A+N+  +M   G+ P++VT
Sbjct: 193 GHTSAAIRLLRSMEK-GNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            N++  A    GE      ++ EM  + + PN  +   ++   CKEG + +A      M 
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + GV P++V +  LI G     + D   +V  +M      P+V +Y+T++N +     MD
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +F++M +  + P+   Y+ L  G       + A  L   M+  G  P++V +  ++
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILL 431

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C +  +D+A+ +   +    + P+++ +  ++ G   A +   A ++   + + G+ 
Sbjct: 432 DYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLK 491

Query: 491 PQKSTFLLLAEARRATGLTKEAKRIL 516
           P   T+ ++       GL  EA ++ 
Sbjct: 492 PNVWTYNIMTHGLCKRGLLDEATKLF 517



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 196/385 (50%), Gaps = 14/385 (3%)

Query: 70  RTVRSMTK------------LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL 117
           R +RSM K            L++SL +  +  +A  +F+ +I  G  P++VT  +L+ AL
Sbjct: 200 RLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYAL 259

Query: 118 TIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT 177
                +  ++++++++ ++ + P++I    V++A  + G + +A D    M +SG+ P  
Sbjct: 260 CNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDV 319

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
            TY  LI G+ +  + +E+VK+ D+M  +G   PN+ +YN L+  +C  + + +A  +  
Sbjct: 320 VTYTALIDGHCLRSEMDEAVKVFDMMVHKG-CAPNVFSYNTLINGYCKIERMDKAMYLFE 378

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           +M    + P+ VTYNT+       G    A  +  EM   G  P+  T  I++   CK  
Sbjct: 379 EMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNC 438

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
            + +A+   + ++   + P++ I+ ++I G     + +   ++ + +    + P+V TY+
Sbjct: 439 HLDKAMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYN 498

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            + +     G +D+  ++F +M +     D   Y+ + +G++R  E  +A +LL  M+  
Sbjct: 499 IMTHGLCKRGLLDEATKLFMEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLAR 558

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRA 442
           GF  +V   TT++ G  SD  +D++
Sbjct: 559 GFSCDVST-TTLLVGMLSDDGLDQS 582



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 83/371 (22%), Positives = 174/371 (46%), Gaps = 1/371 (0%)

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           S+  N   + +     +++A+ +F +M      P+   +  ++       +    + L  
Sbjct: 39  SLLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSR 98

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M   G +  N+ T NVL+ ++C+   +  A++V+ K+   G +PD  ++ T+       
Sbjct: 99  KMDSFG-IPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLE 157

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           G+  +A  +  +M   G QP+      +I+G CK G    A+R  R+M++    P++V++
Sbjct: 158 GQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVY 217

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
             LI    +   +     + + M    ++P+++T ++++ A    G       + ++M  
Sbjct: 218 GTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVD 277

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
           + I P+A + + +     +E    +A +++  M +SG  P+VV +T +I G C    MD 
Sbjct: 278 SKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDE 337

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A++VFD M   G +PN+ ++ TL+ GY +  +  +A  + + M    + P   T+  L  
Sbjct: 338 AVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIH 397

Query: 502 ARRATGLTKEA 512
                G  ++A
Sbjct: 398 GLCHVGRLQDA 408



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 60/268 (22%), Positives = 111/268 (41%)

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           + +N   + Y      D A      M H    P+      I++   K  +    L  +R 
Sbjct: 40  LLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRK 99

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M  +G+  N+   N+LI  F  +   +    VLA + +    PD  +++T++      G 
Sbjct: 100 MDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQ 159

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           + +   +FD M   G +PD   Y+ L  G  +      A  LL +M +    P+VV++ T
Sbjct: 160 IGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGT 219

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I   C D    +A  +F +M   G+SPN+ T  +L++      +      +L  M    
Sbjct: 220 LIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRIL 516
           + P   +   + +A    G+  +A  ++
Sbjct: 280 IMPNAISLTTVVDALCKEGMVAQAHDVV 307



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/297 (20%), Positives = 120/297 (40%), Gaps = 6/297 (2%)

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           + +A +  ++M      P +V +  I T+  +         +  +M+  G+  N  T  +
Sbjct: 55  LDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNV 114

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF- 347
           +I+ +C   ++  A      + + G  P+   F  LIKG         + E L L  +  
Sbjct: 115 LINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCL---EGQIGEALHLFDKMI 171

Query: 348 --RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
                PDV+ Y+T++N     G       +   M K   +PD   Y  L     ++++  
Sbjct: 172 WEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQT 231

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +A  L   MI  G  PN+V   +++   C+ G       + ++M +  + PN  +  T++
Sbjct: 232 QAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVV 291

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
               +     +A +++ +M   GV P   T+  L +         EA ++   + +K
Sbjct: 292 DALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHK 348



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/233 (23%), Positives = 101/233 (43%)

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
           S Y     + +AL     M      P++V F  ++    ++     V  +   M  F + 
Sbjct: 47  SKYLHFNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIP 106

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
            +V T + ++N++     ++    +   + K G +PD  +++ L KG   E +  +A  L
Sbjct: 107 HNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHL 166

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
              MI  GF P+VVI+ T+I+G C  G    AI +   M +    P++  + TL+    +
Sbjct: 167 FDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCK 226

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            RQ  +A  +   M   G+ P   T   L  A    G  K    +L+++ + +
Sbjct: 227 DRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSK 279


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/363 (29%), Positives = 181/363 (49%), Gaps = 1/363 (0%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           T++ L+  L         HS+  +   NG   D   +  +++  +++  ++EA+    K+
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
             +G TPT +TYN L+ G    G+ EE++ LL  +   G   P++ TY  L+     +K 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNG-CTPDVVTYTSLIDGLGKKKR 119

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
             EA+ +  +MA+ G+  D V Y  +     Q G+  QA  V   M   G  P+  T   
Sbjct: 120 SFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 179

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +I G CK G+I  A+R  ++M+  G+ PN V+++ LI G  +    D   E+LA MK+  
Sbjct: 180 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 239

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             PD ITY+ +++    +G +   +  FD+M +AG KPD + Y+IL  G+ +    + A 
Sbjct: 240 CTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAAC 299

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            +   M  S   PNVV + T+ISG C    + +A   +  M E G  P+   + +L+ G 
Sbjct: 300 GVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGL 359

Query: 469 SEA 471
            ++
Sbjct: 360 CKS 362



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/415 (27%), Positives = 193/415 (46%), Gaps = 3/415 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L++ G   +A ++       G    + TYTT++  L   K+     ++M ++  NG
Sbjct: 5   LINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG 64

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P    +NA++N   + G +EEA+D   K+ ++G TP   TY +LI G G   +  E+ 
Sbjct: 65  CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAY 124

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL   M+  G +  +   Y  L+R       I +A +V   M + G  PDVVT +T+   
Sbjct: 125 KLFKEMASRG-LALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDG 183

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G    A  +   ME  G+ PN      +I G CK  K+  AL     MK+    P+
Sbjct: 184 LCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPD 243

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +N+LI G  +  D          M E    PDV TY+ +++ +  AG  D    +FD
Sbjct: 244 TITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFD 303

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM  +   P+   Y  L  G  + ++  KA      M E G  P+  ++++++ G C  G
Sbjct: 304 DMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSG 363

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV-HP 491
            ++    +FD+M   GV+ N +T   L++   +A +   A  +   ++  G+ HP
Sbjct: 364 KLEGGCMLFDEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMPHP 417



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/383 (26%), Positives = 175/383 (45%), Gaps = 2/383 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T +++ L +  K QEA A+   +   G  P++ TY  LL  L    R      ++ 
Sbjct: 34  IHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLR 93

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +NG  PD + + ++I+   +     EA   F +M   GL   T  Y  LI+G   AG
Sbjct: 94  KIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAG 153

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  ++  +   M+ +G V P++ T + ++   C    I  A  +   M A G+ P+ V Y
Sbjct: 154 KIPQASSVYKTMTSQGCV-PDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVY 212

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +     +  + D A E++ +M+     P+  T  I+I G CK G +  A  F   M E
Sbjct: 213 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLE 272

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P++  +N+LI GF +  + D    V   M   R +P+V+TY T+++       + K
Sbjct: 273 AGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTK 332

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
               +  M + G  PD+  YS L  G  +  + E    L   M  SG   N    T +I 
Sbjct: 333 ASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGV-ANSQTRTRLIF 391

Query: 432 GWCSDGSMDRAIEVFDKMCEHGV 454
             C    +D A+ +F+ + + G+
Sbjct: 392 HLCKANRVDEAVSLFNAIRKEGM 414



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/379 (24%), Positives = 174/379 (45%), Gaps = 3/379 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L+N L + G+ +EA  +   +++ G  P +VTYT+L+  L  +KR    + + 
Sbjct: 68  TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLF 127

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+  D++ + A+I    ++G + +A   +  M   G  P   T +T+I G   A
Sbjct: 128 KEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKA 187

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+   +V++   M   G + PN   Y+ L+   C  + +  A  ++ +M  +   PD +T
Sbjct: 188 GRIGAAVRIFKSMEARG-LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTIT 246

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +     ++G+   A     EM   G +P+  T  I+ISG+CK G    A      M 
Sbjct: 247 YNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMS 306

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                PN+V +  LI G  +             MKE    PD   YS++++    +G ++
Sbjct: 307 SSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLE 366

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               +FD+M ++G+  ++   + L     +    ++A  L   + + G  P+   + +II
Sbjct: 367 GGCMLFDEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM-PHPYAYNSII 424

Query: 431 SGWCSDGSMDRAIEVFDKM 449
           S     G ++    V+ +M
Sbjct: 425 SALIKSGKVNEGQAVYQEM 443



 Score =  102 bits (253), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 124/267 (46%), Gaps = 6/267 (2%)

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           T++ +     + G   QA  +  E   NG   +  T   I+    K  KI+EA+     +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTA 366
              G  P +  +N L+ G  + M R  ++E + L+++   N   PDV+TY+++++     
Sbjct: 61  TANGCTPTIATYNALLNGLCK-MGR--LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKK 117

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
               +  ++F +M   G+  D   Y+ L +G ++  +  +A  +  TM   G  P+VV  
Sbjct: 118 KRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTL 177

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           +T+I G C  G +  A+ +F  M   G++PN   +  L+ G  +AR+   A E+L  MK 
Sbjct: 178 STMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKK 237

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAK 513
               P   T+ +L +    +G    A+
Sbjct: 238 AFCTPDTITYNILIDGLCKSGDVAAAR 264


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 205/426 (48%), Gaps = 7/426 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++ SL   GK +EA  +   +      P +V+Y+T++              +M  +
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM 319

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +  G+ P+   +N++I    + G   EA     +M    + P    Y TLI G+   G  
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             + K  D M  +  + P+  TY  L++ +     + E  N+ H+M + G+KPD VTY T
Sbjct: 380 RTANKWFDEMLSK-KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y + GE   A  +  EM   G+ PN  T G +I G CK G++  A      M++ G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV---NPDVITYSTIMNAWSTAGFMD 370
           +  N+ I+N ++ G   I     +++ + LMKE  V   +PD ITY+T+++A+   G +D
Sbjct: 499 LQLNVCIYNSMVNG---ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDID 555

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K  ++  +M   G++P    +++L  G+      E  + LL  M+E G  P+ + + T++
Sbjct: 556 KAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C   SM+   +++ +M   GV+P+  T+  L+ G+ +AR    A  + + M   G  
Sbjct: 616 KQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYV 675

Query: 491 PQKSTF 496
           P  +++
Sbjct: 676 PTVTSY 681



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 211/425 (49%), Gaps = 3/425 (0%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFN 124
           + S   V S + +++     G+ ++A  + +++   G KP+  TY +++  L  I K F 
Sbjct: 287 RSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           +   ++ ++    + PD++ +  +I+ F + G++  A   F +M    ++P   TY TLI
Sbjct: 347 A-EKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLI 405

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           +G+G  GK  E   L   M   G +KP+  TY  L+  +C    +  A+++ ++M   GM
Sbjct: 406 QGFGQGGKVIEPQNLFHEMISRG-LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P++VTY  +     ++GE D A E++ EM   G+Q N      +++G CK G I++A++
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
             + M+  G+ P+ + +  +I  +  + D D   ++L  M +  + P V+T++ +MN + 
Sbjct: 525 LMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC 584

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G ++    +   M + GI PDA  Y+ L K +          ++   M   G  P+  
Sbjct: 585 MLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSN 644

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +  +I G C   ++  A  ++ +M E G  P + ++  L+  + + ++   A E+ + M
Sbjct: 645 TYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEM 704

Query: 485 KAFGV 489
           +  G+
Sbjct: 705 RGHGL 709



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 188/383 (49%), Gaps = 3/383 (0%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P+ I F+       E G++ EA     K+   GL  T  + N  +          E +++
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSR---IANNSEGIEM 244

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
              +  E  +  N  +YN+++ + C    + EA  ++ +M      PDVV+Y+T+   Y 
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
             GE  +A +++ +M+  G++PN  T   II   CK GK  EA +  R M    + P+ V
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           ++  LI GF ++      ++    M   +++PD ITY+T++  +   G + + + +F +M
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G+KPD   Y+ L   Y +  E   A  L   M++ G  PN+V +  +I G C  G +
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D A E+ D+M + G+  N+  + +++ G  +A    +A ++++ M+  G+ P   T+  +
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
            +A    G   +A ++L ++ ++
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDR 567



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 206/442 (46%), Gaps = 5/442 (1%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIMSQVEENGMDP 140
           L+E G   EA+ + + L+  G    +VT  +  A L+ I      I   +    E G+  
Sbjct: 200 LVEIGHLSEARKLLDKLLSYG---LVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISW 256

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           ++  +N +I +    G ++EA     +M     TP   +Y+T+I GY   G+ ++++KL+
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
           D M  +G +KPN  TYN ++   C      EA  V+ +M +  + PD V Y T+   + +
Sbjct: 317 DDMQIKG-LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFK 375

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
            G    A +   EM    + P+  T   +I G+ + GK+ E       M   G+ P+ V 
Sbjct: 376 LGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVT 435

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           +  LI  + +  +      +   M +  + P+++TY  +++     G +D   E+ D+M 
Sbjct: 436 YTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMR 495

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
           K G++ +   Y+ +  G  +    E+A +L+  M  +G  P+ + +TT+I  +C  G +D
Sbjct: 496 KKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDID 555

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
           +A ++  +M + G+ P + TF  LM G+         + +L  M   G+ P   T+  L 
Sbjct: 556 KAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615

Query: 501 EARRATGLTKEAKRILSKIKNK 522
           +            +I  +++N+
Sbjct: 616 KQHCIRNSMNTTTKIYKRMRNQ 637



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 1/165 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   LMN     G  ++   +   ++E G  P  +TY TL+    I+   N+   I 
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY 631

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+ PDS  +N +I    ++ N++EA   + +M E G  PT ++YN LIK +   
Sbjct: 632 KRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
            K  E+ +L + M   G V      YN  V     E ++    N+
Sbjct: 692 KKILEARELFEEMRGHGLVADG-EIYNFFVDMCYEEGDVEITLNL 735



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 104/227 (45%), Gaps = 18/227 (7%)

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
           R   T K +G  PN + F++  +  VEI     + E   L+ +      +++Y  ++   
Sbjct: 178 RLIYTYKYWG--PNPIAFDIFFQVLVEI---GHLSEARKLLDK------LLSYGLVVTVD 226

Query: 364 STAGFMDKCKEIFDDMGKA-------GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           S   F+ +     + +  A       GI  +  +Y+I+     R  + ++A  LLM M  
Sbjct: 227 SCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDF 286

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
               P+VV ++T+I G+C  G + +A+++ D M   G+ PN  T+ +++    +  + + 
Sbjct: 287 RSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           AE++L+ M +  + P    +  L       G  + A +   ++ +K+
Sbjct: 347 AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK 393


>gi|222616383|gb|EEE52515.1| hypothetical protein OsJ_34721 [Oryza sativa Japonica Group]
          Length = 820

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 195/370 (52%), Gaps = 17/370 (4%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++    +G+ Q AQ +F  +++   +P +VTY  L +          +  ++ ++ +
Sbjct: 438 TCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMAD 497

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++P+S+ +   I  F   GN+ EA   F  ++E G+      Y++++ GY ++G  + 
Sbjct: 498 QGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDH 557

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  L   ++R+GN+  +    + L+   C   N+  A NV   M    + PDV++Y+ + 
Sbjct: 558 AYMLFVRVARQGNLVDHFSC-SKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLI 616

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           + Y QNG+ D+A     +M   G+  +     I+++GYCK G+++EA +    M   G+ 
Sbjct: 617 SIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIK 676

Query: 316 PNLVIFNLLIKGFVE----------------IMDRDGVDEVLALMKEFRVNPDVITYSTI 359
           P+++ + +L+ G ++                 + R   +++L+ MK+ ++ PDV  Y+ +
Sbjct: 677 PDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVL 736

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++    A ++ + +E+FD+M + G+ PDA+AY+ L  GY  + E  KAE+LL  MI+ G 
Sbjct: 737 IDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGI 796

Query: 420 HPNVVIFTTI 429
            P+ + F+ +
Sbjct: 797 EPDELTFSVL 806



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 213/444 (47%), Gaps = 17/444 (3%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           ++ L+    + G   EA A F    + G     V Y   +         N    ++++++
Sbjct: 367 VSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMK 426

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G+ PD I +  +I+ +   G M+ A   F +M ++ + P   TYN L  G+  +G   
Sbjct: 427 YGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVM 486

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           E   LLD M+ +G ++PN  TY + +  +C   N++EA  + + +   G+    V Y+++
Sbjct: 487 EVFDLLDRMADQG-LEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSM 545

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              Y  +G  D A  + V +   G   +  +C  +I+  C+ G ++ A    + M E+ V
Sbjct: 546 VCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDV 605

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P+++ ++ LI  + +  D D        M +  ++ DVI Y+ +MN +  AG + +  +
Sbjct: 606 VPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQ 665

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE----------------ELLMTMIESG 418
           +F  M   GIKPD  AY++L  G+++E   +  E                +LL +M +  
Sbjct: 666 LFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQ 725

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P+V  +T +I G C    +  A E+FD+M + G++P+   +  L+ GY    +  +AE
Sbjct: 726 IEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAE 785

Query: 479 EILQIMKAFGVHPQKSTFLLLAEA 502
           ++LQ M   G+ P + TF +L ++
Sbjct: 786 DLLQEMIDKGIEPDELTFSVLNQS 809



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/483 (21%), Positives = 214/483 (44%), Gaps = 23/483 (4%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R  +  +  L + GK   A  I   +         + Y  ++  L  + R +    ++  
Sbjct: 260 RGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLEN 319

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
               G +PD   ++ +I ++ + GN+  A+D +  M   G+       + L++ +   G 
Sbjct: 320 KARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGM 379

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             E++    L  ++  +  +   YN+ +  +C   N+ EA  ++++M   G+ PD + Y 
Sbjct: 380 TSEAIAYF-LKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYT 438

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            + + Y   GE   A++V  EM    ++P+  T  I+ SG+CK G + E       M + 
Sbjct: 439 CLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQ 498

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ PN + + + I GF    +    + +  +++E  ++   + YS+++  +  +G+ D  
Sbjct: 499 GLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHA 558

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             +F  + + G   D  + S L     R    + A  +   M+E    P+V+ ++ +IS 
Sbjct: 559 YMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISI 618

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C +G MD+A   F  M + G+S ++  +  LM GY +A +   A ++   M   G+ P 
Sbjct: 619 YCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPD 678

Query: 493 KSTFLLL----------------AEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPV 536
              + +L                A+ RR+  L     ++LS +K      +M+ E D+P 
Sbjct: 679 VIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMK------DMQIEPDVPC 732

Query: 537 ESL 539
            ++
Sbjct: 733 YTV 735



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/438 (20%), Positives = 194/438 (44%), Gaps = 20/438 (4%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           +P  A A F +    G      TY+ ++  L+  ++   + S+               F+
Sbjct: 79  RPAIAFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSL---------------FS 123

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY--NTLIKGYGIAGKPEESVKLLDLMS 204
            ++++ + SG   E +      + +  TP + ++  + LIK        + ++ L   + 
Sbjct: 124 ELVSSSNASG--PEILPLVDHHRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGIC 181

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G V P++ T+N+L++               ++M    + PDV T+  +  +  Q  + 
Sbjct: 182 RLG-VVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKV 240

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           D+A +V  EM   GV+P+ R     + G C  GK   A    + +    V    + +N++
Sbjct: 241 DEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMV 300

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           + G  + M  D  +++L        NPDV  YS ++ ++   G +    + ++ M   GI
Sbjct: 301 MDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGI 360

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           + + H  S L + + +     +A    +   +SG H + VI+   +  +C +G+M+ A++
Sbjct: 361 ETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVK 420

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + ++M   G++P+   +  L+ GY    +   A+++ + M    + P   T+ +LA    
Sbjct: 421 LLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFC 480

Query: 505 ATGLTKEAKRILSKIKNK 522
            +GL  E   +L ++ ++
Sbjct: 481 KSGLVMEVFDLLDRMADQ 498



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 111/243 (45%), Gaps = 17/243 (6%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S +KL+N L   G  Q A  +   ++E    P +++Y+ L++        +  H     +
Sbjct: 576 SCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDM 635

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY------ 187
            + G+  D I +  ++N + ++G ++EA   F +M   G+ P    Y  L+ G+      
Sbjct: 636 VQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQ 695

Query: 188 ----GIAGKPEESV------KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
               GIA +    +      KLL  M ++  ++P++  Y VL+   C  + + EA  +  
Sbjct: 696 QGWEGIAKERRSFLLRANHNKLLSSM-KDMQIEPDVPCYTVLIDGKCKAEYLVEARELFD 754

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           +M   G+ PD   Y  +   Y   GE  +AE+++ EM   G++P+  T  ++     +  
Sbjct: 755 EMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSR 814

Query: 298 KIK 300
           KI+
Sbjct: 815 KIQ 817


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 226/468 (48%), Gaps = 6/468 (1%)

Query: 57  QTHCSFC--MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL 114
           + HC F   M +     +     ++  L +  +  +A++I   +++ G  P L TY+ ++
Sbjct: 66  KAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLII 125

Query: 115 AALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT 174
             L   K  +    ++ Q+ E G  P+SI +N++I+ +S SG   E++  F +M   G+ 
Sbjct: 126 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVI 185

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN--ITEA 232
           PT    N+ I      G+  E+  + D M  +G  KP++ +Y+ ++  +    +  + + 
Sbjct: 186 PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP-KPDIISYSTMLHGYATATDSCLADV 244

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
            N+ + M   G+ P+   +N +  AYA+ G  D+A  +  +M++ G+ P+  T   +IS 
Sbjct: 245 HNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 304

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
            C+ G++ +AL     M + GV P+  ++  LI+G     +     E+++ M    + P 
Sbjct: 305 LCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPP 364

Query: 353 VITY-STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
            + Y S+I+N     G + + K+I D M + G +P+   ++ L +GY      E+A  LL
Sbjct: 365 GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALL 424

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M   G  PN  I+ T++ G+C +G +D A+ VF  M   GV P    +  ++ G  +A
Sbjct: 425 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQA 484

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           R+   A+++   M   G      T+ ++         T EA  +L K+
Sbjct: 485 RRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 532



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 198/421 (47%), Gaps = 74/421 (17%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLA--ALTIQKRFNSIHS 128
           TV +    +++L + G+  EA+ IF++++  G KP +++Y+T+L   A         +H+
Sbjct: 187 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHN 246

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           I + +   G+ P+   FN +INA++  G M++AM  F  M+  G+ P T T+ T+I    
Sbjct: 247 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 306

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN----------------------- 225
             G+ ++++   + M   G V P+   Y  L++  CN                       
Sbjct: 307 RIGRLDDALHKFNHMVDIG-VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPG 365

Query: 226 -------------EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
                        E  + E  ++M  M  +G +P+VVT+N++   Y   G  ++A  ++ 
Sbjct: 366 VKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLD 425

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG----- 327
            M   G++PN    G ++ GYCK G+I +AL   R M   GV P  V++++++ G     
Sbjct: 426 AMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQAR 485

Query: 328 --------FVEIMD-------------------RDGVDEV-LALMKEFRVNP--DVITYS 357
                   F E+++                    +  DE  + L K F +N   D+IT++
Sbjct: 486 RTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFN 545

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++A    G   + KE+FD +   G+ P+   YS++    ++E+  E+A+ L +++ +S
Sbjct: 546 IVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKS 605

Query: 418 G 418
           G
Sbjct: 606 G 606



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 202/456 (44%), Gaps = 40/456 (8%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P++ TY  L+       R +   +I+ ++ +NG+ PD  F  ++I  F + G +++A   
Sbjct: 12  PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDD-FSYSLIYGFVKDGEVDKAHCL 70

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F +M E G+ P     N++IK      + +++  ++  M   G + P+L TY++++   C
Sbjct: 71  FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG-IAPDLFTYSLIIDGLC 129

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
             K + +A  V+ +M  +G +P+ +TYN++   Y+ +G  +++  V  +M   GV P   
Sbjct: 130 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 189

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR--DGVDEVLA 342
            C   I    K G+  EA     +M   G  P+++ ++ ++ G+    D     V  +  
Sbjct: 190 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFN 249

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA-------------- 388
           LM    + P+   ++ ++NA++  G MDK   IF+DM   G+ PD               
Sbjct: 250 LMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIG 309

Query: 389 ---------------------HAYSILAKGYVREQEPEKAEELLMTMIESGFHP-NVVIF 426
                                  Y  L +G     E  KA+EL+  M+     P  V  F
Sbjct: 310 RLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYF 369

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           ++II+  C +G +    ++ D M + G  PN+ TF +LM GY        A  +L  M +
Sbjct: 370 SSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMAS 429

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            G+ P    +  L +     G   +A  +   + +K
Sbjct: 430 IGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 465



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 102/228 (44%), Gaps = 1/228 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   + G+  +A  +F +++  G KP+ V Y+ +L  L   +R  +   +  ++ E+G
Sbjct: 442 LVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESG 501

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
                  +  V+     +   +EA     K+    +     T+N +I      G+ +E+ 
Sbjct: 502 TTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAK 561

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L D +S  G V PN++TY++++     E++  EA N+   +  SG   D    N I   
Sbjct: 562 ELFDAISTYGLV-PNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRM 620

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
                E  +A   +  +  N +     T  ++ S + +EGK +E ++ 
Sbjct: 621 LLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKL 668



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 29/123 (23%), Positives = 62/123 (50%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++++ + G+ QEA+ +F+ +   G  P++ TY+ ++  L  ++ +    ++   VE++G
Sbjct: 547 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 606

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              DS   N ++        + +A +    + E+ LT   ST + L   +   GK  E +
Sbjct: 607 HASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHI 666

Query: 198 KLL 200
           KLL
Sbjct: 667 KLL 669


>gi|356540307|ref|XP_003538631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Glycine max]
          Length = 804

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 214/433 (49%), Gaps = 1/433 (0%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           +EA  +F  +   G  P  VTY  LL      +R      ++ ++E NG  P S+ +N++
Sbjct: 281 EEAVHLFQQMKLEGFTPDKVTYNALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSL 340

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           I+A+++ G +EEA+D   +M   G+ P   TY TL+ G+  AGK + ++++  L  R   
Sbjct: 341 ISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVF-LEMRAVG 399

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            KPN+ T+N L++   N     E   V   +      PD+VT+NT+   + QNG   Q  
Sbjct: 400 CKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVS 459

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            +  EM+  G      T   +IS Y + G   +A+   ++M E GV P+L  +N ++   
Sbjct: 460 GIFKEMKRAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAAL 519

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
                 +  ++VLA M++ R  P+ ++YS++++A++    +++     +++    ++  A
Sbjct: 520 ARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHA 579

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
                L     +     + E   + +   G  P++     ++S +     + +A E+ + 
Sbjct: 580 VLLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNF 639

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M E   +P+L T+ +LM+ YS +    ++EEIL+ +   G+ P + ++  +  A    G 
Sbjct: 640 MHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGR 699

Query: 509 TKEAKRILSKIKN 521
            KEA RI S++K+
Sbjct: 700 MKEASRIFSEMKD 712



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 174/369 (47%)

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + +G+  D   +  +INA+S SG   +A++ F KM++ G  PT  TYN ++  YG  G P
Sbjct: 185 QNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMP 244

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +V  L    R   V P+L TYN L+          EA ++  +M   G  PD VTYN 
Sbjct: 245 WSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNA 304

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + ++    +A +V+ EME NG  P   T   +IS Y K G ++EAL     M   G
Sbjct: 305 LLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKG 364

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P++  +  L+ GF +    D   +V   M+     P++ T++ ++      G   +  
Sbjct: 365 IKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMM 424

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           ++FDD+      PD   ++ L   + +     +   +   M  +GF      F T+IS +
Sbjct: 425 KVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAY 484

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              GS D+A+ V+  M E GV P+L T+  ++   +      ++E++L  M+     P +
Sbjct: 485 SRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNE 544

Query: 494 STFLLLAEA 502
            ++  L  A
Sbjct: 545 LSYSSLLHA 553



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/385 (27%), Positives = 195/385 (50%), Gaps = 24/385 (6%)

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESG----NMEEAMDTF 165
           YT L+ A +   R+    ++ ++++++G +P  I +N V+N + + G    N+   ++  
Sbjct: 196 YTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMPWSNVTALVEA- 254

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
             M+  G+ P   TYNTLI         EE+V L   M  EG   P+  TYN L+  +  
Sbjct: 255 --MRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEG-FTPDKVTYNALLDVFGK 311

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
            +   EA  V+ +M A+G  P  VTYN++ +AYA+ G  ++A ++  +M H G++P+  T
Sbjct: 312 SRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKGIKPDVFT 371

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK------GFVEIMDRDGVDE 339
              ++SG+ K GK   A++    M+  G  PN+  FN LIK       F E+M      +
Sbjct: 372 YTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMM------K 425

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           V   +K    +PD++T++T++  +   G   +   IF +M +AG   +   ++ L   Y 
Sbjct: 426 VFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLISAYS 485

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           R    ++A  +  +M+E+G  P++  +  +++     G  +++ +V  +M +    PN  
Sbjct: 486 RCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWEQSEKVLAEMEDGRCKPNEL 545

Query: 460 TFETLMWGYSEARQPWR----AEEI 480
           ++ +L+  Y+  ++  R    AEEI
Sbjct: 546 SYSSLLHAYANGKEIERMNAFAEEI 570



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 198/423 (46%), Gaps = 9/423 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++  + G  +EA  +   ++  G KP + TYTTLL+      + +    +  ++   G
Sbjct: 340 LISAYAKGGLLEEALDLKTQMVHKGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVG 399

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+   FNA+I      G   E M  F  +K    +P   T+NTL+  +G  G   +  
Sbjct: 400 CKPNICTFNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVS 459

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +   M R G V     T+N L+ A+    +  +A  V   M  +G+ PD+ TYN +  A
Sbjct: 460 GIFKEMKRAGFVAER-DTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAA 518

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            A+ G  +Q+E+V+ EME    +PN  +   ++  Y    +I+    FA  +    V  +
Sbjct: 519 LARGGLWEQSEKVLAEMEDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETH 578

Query: 318 LVIFNLLIKGFVEIMDR-DGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCK 373
            V    L+K  V +  + D + E      E R   ++PD+ T + +++ +     + K  
Sbjct: 579 AV----LLKTLVLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAH 634

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           EI + M +    P    Y+ L   Y R +  +K+EE+L  ++E G  P+ + + T+I  +
Sbjct: 635 EILNFMHETRFTPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAY 694

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C +G M  A  +F +M +  + P++ T+ T +  Y+       A ++++ M   G  P +
Sbjct: 695 CRNGRMKEASRIFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQ 754

Query: 494 STF 496
           +T+
Sbjct: 755 NTY 757



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 90/360 (25%), Positives = 172/360 (47%), Gaps = 5/360 (1%)

Query: 79  MNSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
            N+LI+    RGK  E   +F+++      P +VT+ TLLA        + +  I  +++
Sbjct: 407 FNALIKMHGNRGKFAEMMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMK 466

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G   +   FN +I+A+S  G+ ++AM  +  M E+G+ P  STYN ++      G  E
Sbjct: 467 RAGFVAERDTFNTLISAYSRCGSFDQAMAVYKSMLEAGVVPDLSTYNAVLAALARGGLWE 526

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           +S K+L  M  +G  KPN  +Y+ L+ A+ N K I        ++ +  ++   V   T+
Sbjct: 527 QSEKVLAEM-EDGRCKPNELSYSSLLHAYANGKEIERMNAFAEEIYSGSVETHAVLLKTL 585

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
               +++    + E   +E+   G+ P+  T   ++S Y ++  + +A      M E   
Sbjct: 586 VLVNSKSDLLIETERAFLELRRRGISPDITTLNAMLSIYGRKQMVAKAHEILNFMHETRF 645

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P+L  +N L+  +    +    +E+L  + E  + PD I+Y+T++ A+   G M +   
Sbjct: 646 TPSLTTYNSLMYMYSRSENFQKSEEILREVLEKGMKPDRISYNTVIYAYCRNGRMKEASR 705

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           IF +M  + + PD   Y+     Y  +    +A +++  MI+ G  P+   + +I+  +C
Sbjct: 706 IFSEMKDSALVPDVVTYNTFIATYAADSMFAEAIDVVRYMIKQGCKPDQNTYNSIVDWYC 765



 Score =  119 bits (297), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 171/371 (46%), Gaps = 7/371 (1%)

Query: 147 AVINAFSESGNMEEAMDTF-WKMKESGLTP--TTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            +I A   S   + A+  F W    +  T   ++S    +IK  G AG+   +  LL  +
Sbjct: 125 GIIKALGFSNKCDLALAVFHWVRTNNSNTNLFSSSAIPVIIKILGKAGRVSSAASLLLAL 184

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
             +G V  ++  Y  L+ A+ +     +A N+ +KM   G  P ++TYN +   Y + G 
Sbjct: 185 QNDG-VHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGM 243

Query: 264 ADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKI-KEALRFARTMKEYGVHPNLVIF 321
                  +VE M   GV P+  T   +IS  C+ G + +EA+   + MK  G  P+ V +
Sbjct: 244 PWSNVTALVEAMRSRGVAPDLYTYNTLISC-CRRGSLYEEAVHLFQQMKLEGFTPDKVTY 302

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N L+  F +        +VL  M+    +P  +TY+++++A++  G +++  ++   M  
Sbjct: 303 NALLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVH 362

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            GIKPD   Y+ L  G+ +  + + A ++ + M   G  PN+  F  +I    + G    
Sbjct: 363 KGIKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAE 422

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
            ++VFD +     SP++ T+ TL+  + +     +   I + MK  G   ++ TF  L  
Sbjct: 423 MMKVFDDIKLCNCSPDIVTWNTLLAVFGQNGMDSQVSGIFKEMKRAGFVAERDTFNTLIS 482

Query: 502 ARRATGLTKEA 512
           A    G   +A
Sbjct: 483 AYSRCGSFDQA 493



 Score =  108 bits (270), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 124/247 (50%), Gaps = 1/247 (0%)

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI-MD 333
           +++GV  +      +I+ Y   G+ ++A+     M++ G +P L+ +N+++  + ++ M 
Sbjct: 185 QNDGVHIDVYAYTCLINAYSSSGRYRDAVNLFNKMQQDGCNPTLITYNVVLNVYGKMGMP 244

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
              V  ++  M+   V PD+ TY+T+++        ++   +F  M   G  PD   Y+ 
Sbjct: 245 WSNVTALVEAMRSRGVAPDLYTYNTLISCCRRGSLYEEAVHLFQQMKLEGFTPDKVTYNA 304

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L   + + + P++A ++L  M  +GF P  V + ++IS +   G ++ A+++  +M   G
Sbjct: 305 LLDVFGKSRRPQEAMKVLQEMEANGFSPTSVTYNSLISAYAKGGLLEEALDLKTQMVHKG 364

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           + P++ T+ TL+ G+ +A +   A ++   M+A G  P   TF  L +     G   E  
Sbjct: 365 IKPDVFTYTTLLSGFEKAGKDDFAIQVFLEMRAVGCKPNICTFNALIKMHGNRGKFAEMM 424

Query: 514 RILSKIK 520
           ++   IK
Sbjct: 425 KVFDDIK 431


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 216/479 (45%), Gaps = 48/479 (10%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           + SL+ RG+  EA      L+    +P   T   L+  L+   R      +++       
Sbjct: 74  LRSLVRRGELDEAL----RLVGSARRPDAGTCAALIKKLSASGRTAEARRVLAAC----- 124

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            PD + +NA++  +  +G ++ A    W   E  +     T +TLI+G    G+   ++ 
Sbjct: 125 GPDVMAYNAMMAGYCGAGQVDAARR--W-CAERAVERDAYTCDTLIRGLCGRGRTANALA 181

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           +LD M R   V P++ TY +L+ A C      +A  ++ +M   G  PD+VTYN +    
Sbjct: 182 VLDEMLRRRCV-PDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGI 240

Query: 259 AQNGEADQA-----------------------------------EEVIVEMEHNGVQPNG 283
            Q G  D A                                   EE++ EM   G  PN 
Sbjct: 241 CQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNV 300

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T  ++IS  C++G ++ AL     + +YG  PN + +N L+  F +    D     L L
Sbjct: 301 VTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDL 360

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M      PD+++Y+T++ A   +G +D   E+   +   G  P   +Y+ +  G  +  +
Sbjct: 361 MVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGK 420

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            ++A ELL  M+  G  P+++ ++TI +G C +  ++ AI  F K+ + G+ PN   +  
Sbjct: 421 TKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNA 480

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           ++ G  + R+   A ++   M   G  P +ST+ +L E     GL KEA+ +L ++ ++
Sbjct: 481 IILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 539



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 189/392 (48%), Gaps = 1/392 (0%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           +C  +   R   +   L+  L  RG+   A A+ + ++     P +VTYT LL A   + 
Sbjct: 150 WCAERAVERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRS 209

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
            +     ++ ++ + G  PD + +N V+N   + G +++A++    +   G  P T +YN
Sbjct: 210 GYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYN 269

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            ++KG   A + E++ +L+  M ++G   PN+ T+N+L+   C +  +  A  V+ ++  
Sbjct: 270 IVLKGLCTAERWEDAEELMGEMGQKG-CPPNVVTFNMLISFLCRKGLVEPALEVLEQIPK 328

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G  P+ ++YN +  A+ +  + D+A   +  M   G  P+  +   +++  C+ G++  
Sbjct: 329 YGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDV 388

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A+     +K+ G  P L+ +N +I G  +        E+L  M    + PD+ITYSTI  
Sbjct: 389 AVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAA 448

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                  ++     F  +   GI+P+   Y+ +  G  + +E   A +L   MI +G  P
Sbjct: 449 GLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMP 508

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           N   +T +I G   +G +  A ++ D++C  G
Sbjct: 509 NESTYTILIEGLAYEGLIKEARDLLDELCSRG 540


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 215/450 (47%), Gaps = 6/450 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           RS   L++   + GK    +  F ++I  G KP++ TY  ++  +  +    +   +  +
Sbjct: 99  RSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEE 158

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           ++  G+ PD++ +N++I+ + + G +++ +  F +MK     P   TYN+LI  +  +GK
Sbjct: 159 MKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGK 218

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             + ++    M + G +KPN+ +Y+ LV A+C E  + +A      M   G  P+  TY 
Sbjct: 219 LPKGLEFYREMKQSG-LKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYT 277

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++  A  + G    A  +  EM   GV+ N  T   +I G C   ++KEA +    M   
Sbjct: 278 SLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTA 337

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF--MD 370
           GV PNL  +N LI GFV+  + D   E+L  +K   + PD++ Y T +  W   G   ++
Sbjct: 338 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFI--WGLCGLEKIE 395

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             K + ++M + GIK +   Y+ L   Y +   P +   LL  M E      VV F  +I
Sbjct: 396 AAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLI 455

Query: 431 SGWCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            G C +  + +AI+ F +M  + G+ PN   +  ++ G  +  Q   A  + + M   G+
Sbjct: 456 DGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGL 515

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            P ++ +  L +     G   EA  +  K+
Sbjct: 516 VPDRTAYTSLMDGNLKQGNMLEALALRDKM 545



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/478 (23%), Positives = 225/478 (47%), Gaps = 37/478 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   +++ + + G  + A+ +F  +   G  P  VTY +++       R +      
Sbjct: 132 TVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFF 191

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++    +PD I +N++IN F +SG + + ++ + +MK+SGL P   +Y+TL+  +   
Sbjct: 192 EEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKE 251

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
              ++++K    M R G+V PN  TY  LV A C   N+++A+ + ++M   G++ +VVT
Sbjct: 252 DMMQQAIKFYVDMRRVGHV-PNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVT 310

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +           +AE++  +M   GV PN  +   +I G+ K   +  AL     +K
Sbjct: 311 YTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 370

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG--- 367
             G+ P+L+++   I G   +   +    V+  M+E  +  + + Y+T+M+A+  +G   
Sbjct: 371 GRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPT 430

Query: 368 ----FMDKCKEI-------------------------FDDMGKA----GIKPDAHAYSIL 394
                +++ +E+                          D  G+     G++P+A  Y+ +
Sbjct: 431 EGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAM 490

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G  +E + + A  L   M + G  P+   +T+++ G    G+M  A+ + DKM E G+
Sbjct: 491 IDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGM 550

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
             +L  + +L+WG+S+  Q  +A   L+ M    + P +   + + +     G   EA
Sbjct: 551 KLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELGCIDEA 608



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/504 (23%), Positives = 228/504 (45%), Gaps = 15/504 (2%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P    +  L + L             S+++   + P +   N +++ F++ G  +     
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F  M  +G  PT  TYN +I      G  E +  L + M   G + P+  TYN ++  + 
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLI-PDTVTYNSMIDGYG 179

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
               + +      +M +   +PDV+TYN++   + ++G+  +  E   EM+ +G++PN  
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVV 239

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           +   ++  +CKE  +++A++F   M+  G  PN   +  L+    +I +      +   M
Sbjct: 240 SYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEM 299

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            E  V  +V+TY+ +++    A  M + +++F  M  AG+ P+  +Y+ L  G+V+ +  
Sbjct: 300 LEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNM 359

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           ++A ELL  +   G  P+++++ T I G C    ++ A  V ++M E+G+  N   + TL
Sbjct: 360 DRALELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTL 419

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
           M  Y ++  P     +L+ M+         TF +L +      L  +A     ++ N   
Sbjct: 420 MDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFG 479

Query: 525 TNEMEAEEDIPVESLERLYHKEATTASYPNLLQ---IPN--VVSSDQKGSAAALKKGRML 579
                A     ++ L +    +A T  +  + Q   +P+    +S   G+   LK+G ML
Sbjct: 480 LQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGN---LKQGNML 536

Query: 580 ----LRD--ADSSLECSWFATTSM 597
               LRD  A+  ++    A TS+
Sbjct: 537 EALALRDKMAEIGMKLDLLAYTSL 560



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 186/382 (48%), Gaps = 2/382 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + L+++  +    Q+A   + ++   GH P+  TYT+L+ A       +    + +
Sbjct: 238 VVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLAN 297

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E G++ + + + A+I+   ++  M+EA   F KM  +G+ P  ++YN LI G+  A 
Sbjct: 298 EMLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAK 357

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + +++LL+ +   G ++P+L  Y   +   C  + I  A  VM++M  +G+K + + Y
Sbjct: 358 NMDRALELLNELKGRG-IQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIY 416

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR-FARTMK 310
            T+  AY ++G   +   ++ EM+    +    T  ++I G CK   + +A+  F R   
Sbjct: 417 TTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSN 476

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           ++G+ PN  ++  +I G  +         +   M +  + PD   Y+++M+     G M 
Sbjct: 477 DFGLQPNAAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNML 536

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   + D M + G+K D  AY+ L  G+ +  + +KA   L  MI     P+ V+   ++
Sbjct: 537 EALALRDKMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVL 596

Query: 431 SGWCSDGSMDRAIEVFDKMCEH 452
                 G +D A+ +   + +H
Sbjct: 597 KKHYELGCIDEAVGLQSYLMKH 618



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 158/343 (46%), Gaps = 1/343 (0%)

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNV-KPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           N++++   ++    E   + D +    NV  P    ++ L     +   + EA     KM
Sbjct: 30  NSILREIVLSKAELEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKM 89

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
               + P   + N +   +A+ G+ D  +    +M   G +P   T  I+I    KEG I
Sbjct: 90  KRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDI 149

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
           + A      MK  G+ P+ V +N +I G+ ++   D        MK     PDVITY+++
Sbjct: 150 EAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSL 209

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +N +  +G + K  E + +M ++G+KP+  +YS L   + +E   ++A +  + M   G 
Sbjct: 210 INCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGH 269

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            PN   +T+++   C  G++  A  + ++M E GV  N+ T+  L+ G  +A +   AE+
Sbjct: 270 VPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEK 329

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +   M   GV P  +++  L            A  +L+++K +
Sbjct: 330 LFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGR 372


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 212/433 (48%), Gaps = 12/433 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH----KPSLVTYTTLLAALTIQKRFNSIH 127
           +RS   L+++ +   +  +A A F +L  G       P+L TY  +L +L  +   +   
Sbjct: 119 IRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAV 178

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           ++   +    + PD I ++ ++   ++   ++ A+D   +M  S + P    YN L+ G 
Sbjct: 179 TLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLGGC 238

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
             AG+ E+ +++ D + ++   +PNL TYNV++   C      E   V  +M A+ ++PD
Sbjct: 239 FKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPD 298

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           V+TY  +     ++G+ D A  V  E+   G+  +      ++ G+C+ G+++EA +F  
Sbjct: 299 VITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWD 358

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM----KEFRVNPDVITYSTIMNAW 363
           +    G+  NL  +N++IKG   + D   VDE + L     K+    PD +T+ T+++  
Sbjct: 359 SAGFAGLR-NLRTYNIMIKG---LFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGL 414

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              GF +K   IF++   +G + D  +YS +  G         A ++   M + G  PN 
Sbjct: 415 CQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNS 474

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
            I+  +ISG+C       A+ ++ KM ++G SP + T+ TL+ G  +A +   A  + + 
Sbjct: 475 HIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVARE 534

Query: 484 MKAFGVHPQKSTF 496
           M   G  P  +T+
Sbjct: 535 MVENGFTPDITTY 547



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/426 (22%), Positives = 200/426 (46%), Gaps = 2/426 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L + G+ +E   ++  ++    +P ++TY  L+  L      +    + S++ + G
Sbjct: 270 MLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTG 329

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D+  +N+++  F ++G ++EA   FW            TYN +IKG   +G  +E++
Sbjct: 330 LVIDAAMYNSLVKGFCQAGRVQEAW-KFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAI 388

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L DL+ ++    P+  T+  L+   C      +A+ +  +   SG + DV +Y+++   
Sbjct: 389 ELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMING 448

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G    A +V  +M+ +G +PN      +ISG+C+  +  +A+R    M + G  P 
Sbjct: 449 LCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPT 508

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ +N LI G  +         V   M E    PD+ TY +++    +   +D    I+ 
Sbjct: 509 VITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWK 568

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE-SGFHPNVVIFTTIISGWCSD 436
            +   G+K D   ++IL  G     + ++A  +   M E     PN+V + T++ G    
Sbjct: 569 QILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYET 628

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +D+A  ++  + E G+ P++ ++ T + G     +     ++L  + + G+ P   T+
Sbjct: 629 GYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITW 688

Query: 497 LLLAEA 502
            +L  A
Sbjct: 689 NILVRA 694



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 84/333 (25%), Positives = 156/333 (46%), Gaps = 3/333 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNL-IEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           R +R+   ++  L + G   EA  +++ L  +    P  VT+ TL+  L      N   +
Sbjct: 366 RNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFT 425

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           I  +   +G   D   ++++IN     G + +A+  + KM + G  P +  YN LI G+ 
Sbjct: 426 IFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFC 485

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
              +  ++V++   M+  G   P + TYN L+   C  +   EA +V  +M  +G  PD+
Sbjct: 486 QVYRTSDAVRIYSKMADNG-CSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDI 544

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TY ++      + + D A  +  ++ + G++ +     I+I G C  GK+ EAL     
Sbjct: 545 TTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSD 604

Query: 309 MKEY-GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
           MKE     PNLV +N L+ G  E    D    +   + E  + PD+I+Y+T +    +  
Sbjct: 605 MKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCD 664

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
            + +  ++ D++   GI P    ++IL +  ++
Sbjct: 665 RIHEGIQLLDEVLSRGIIPTVITWNILVRAVIK 697



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/414 (22%), Positives = 185/414 (44%), Gaps = 40/414 (9%)

Query: 148 VINAFSESGNMEEAMDTFWKMKES-GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           V++AFS +   + A+D F  +    G  P   ++N L+  +  A +  ++      +S  
Sbjct: 89  VLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHG 148

Query: 207 G---NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
                + PNL+TYN+++R+ C   ++  A  +   +    + PD +TY+T+    A+   
Sbjct: 149 AFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDR 208

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR-FARTMKEYGVHPNLVIFN 322
            D A +++ EM  + VQP+      ++ G  K G+ ++ +R + + +K+ G  PNL  +N
Sbjct: 209 LDHALDLLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYN 268

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +++ G  +      V EV   M    + PDVITY  +++    +G +D    ++ ++ K 
Sbjct: 269 VMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKT 328

Query: 383 GIKPDAHAYSILAKGYV---REQEPEKAEE---------------LLMTMIESGFH---- 420
           G+  DA  Y+ L KG+    R QE  K  +               ++  + +SG      
Sbjct: 329 GLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAI 388

Query: 421 -------------PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
                        P+ V F T+I G C +G  ++A  +F++    G   ++ ++ +++ G
Sbjct: 389 ELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMING 448

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
                +   A ++ + M   G  P    +  L         T +A RI SK+ +
Sbjct: 449 LCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMAD 502



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 56/238 (23%), Positives = 113/238 (47%), Gaps = 1/238 (0%)

Query: 64  MNKESCRTVRSM-TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+K+ C+    +   L++   +  +  +A  I++ + + G  P+++TY TL+  L   ++
Sbjct: 465 MDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEK 524

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +    S+  ++ ENG  PD   + ++I        +++A+  + ++   GL      +N 
Sbjct: 525 YQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNI 584

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G   AGK +E++ +   M  + N  PNL TYN L+        I +A  +   +   
Sbjct: 585 LIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITED 644

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
           G++PD+++YNT            +  +++ E+   G+ P   T  I++    K G I+
Sbjct: 645 GLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 128/475 (26%), Positives = 223/475 (46%), Gaps = 19/475 (4%)

Query: 53  DSQPQTHCSFCMN-------KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKP 105
           D+ P T  + C++             V+   +++  L +  +  +  A+   +++ G +P
Sbjct: 176 DATPDTCSTLCLSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEP 235

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD--PDSIFFNAVINAFSESGNMEEAMD 163
           S+VTY TLL +   + R + +  ++ ++E  G    P+ +  N VI   +  G++EEA +
Sbjct: 236 SIVTYNTLLDSFLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAE 295

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
               M+ S    ++ TYN LI G    G  +++  L   M  EG + P + TYN ++   
Sbjct: 296 MVEGMRLSK-KASSFTYNPLITGLLAKGFVKKADDLQLEMENEG-IMPTVVTYNAMIHGL 353

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
                +  A     +M A G++PDV+TYN++   Y + G   +A  +  ++ H G+ P  
Sbjct: 354 LQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTV 413

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI----MDRDGVDE 339
            T  I+I GYC+ G ++EA R    M E G  P++  + +L+KG        M R+  DE
Sbjct: 414 LTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDE 473

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +L+      + PD   Y+T + A  T G + K   + + M   GI  D   Y+IL  G  
Sbjct: 474 MLSK----GLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLC 529

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +      A++L M M+ +G  P+ + +T +I   C  G +  A + F  M   G++P+  
Sbjct: 530 KTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAV 589

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
           T+   +  Y      + A    + M   GV P + T+ +L  A   TG T+ A R
Sbjct: 590 TYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYR 644



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 185/422 (43%), Gaps = 10/422 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEG---GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           ++  L  +G  +EA      ++EG     K S  TY  L+  L  +        +  ++E
Sbjct: 280 VITGLARKGDLEEAA----EMVEGMRLSKKASSFTYNPLITGLLAKGFVKKADDLQLEME 335

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G+ P  + +NA+I+   +SG +E A   F +M+  GL P   TYN+L+ GY  AG  +
Sbjct: 336 NEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSLK 395

Query: 195 ESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E++ L  DL  R   + P + TYN+L+  +C   ++ EA  +  +M   G  PDV TY  
Sbjct: 396 EALLLFGDL--RHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTI 453

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +            A E   EM   G+QP+       I      G I +A R    M   G
Sbjct: 454 LMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEG 513

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           +  + V +N+LI G  +  + +   ++   M    + PD ITY+ +++A    G + + +
Sbjct: 514 ISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREAR 573

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           + F DM   G+ P A  Y++    Y R      A      M+E G  PN + +  +I   
Sbjct: 574 KFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHAL 633

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G    A   F +M E G+ PN  T+  L+ G  +      A      M   G+HP  
Sbjct: 634 CRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDY 693

Query: 494 ST 495
            T
Sbjct: 694 LT 695



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 191/398 (47%), Gaps = 7/398 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L+ +G  ++A  +   +   G  P++VTY  ++  L    +  +      ++   G
Sbjct: 314 LITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMG 373

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD I +N+++N + ++G+++EA+  F  ++ +GL PT  TYN LI GY   G  EE+ 
Sbjct: 374 LQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEAR 433

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L + M  +G + P++ TY +L++   N  ++  A     +M + G++PD   YNT   A
Sbjct: 434 RLKEEMVEQGCL-PDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRA 492

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G   +A  +   M   G+  +  T  I+I G CK G + +A      M   G+ P+
Sbjct: 493 ELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPD 552

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKE 374
            + +  LI    E   R  + E     K+     + P  +TY+  ++A+   G +     
Sbjct: 553 CITYTCLIHAHCE---RGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYG 609

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
            F  M + G++P+   Y++L     R    + A      M+E G  PN   +T +I G C
Sbjct: 610 WFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNC 669

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            +G+ + A+  + +M ++G+ P+  T + L  G+ E  
Sbjct: 670 KEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGFDEGH 707



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 152/315 (48%), Gaps = 15/315 (4%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V P+++  N ++R   +     +   V  +M   G++P +VTYNT+  ++ + G  D+  
Sbjct: 198 VAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGRNDKVA 257

Query: 269 EVIVEMEH--NGVQPNGRTCGIIISGYCKEGKIKEA------LRFARTMKEYGVHPNLVI 320
            ++ EME   +G  PN  T  ++I+G  ++G ++EA      +R ++    +  +P  +I
Sbjct: 258 MLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYNP--LI 315

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
             LL KGFV+       D++   M+   + P V+TY+ +++    +G ++  +  F +M 
Sbjct: 316 TGLLAKGFVK-----KADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMR 370

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             G++PD   Y+ L  GY +    ++A  L   +  +G  P V+ +  +I G+C  G ++
Sbjct: 371 AMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLE 430

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            A  + ++M E G  P++ T+  LM G   A     A E    M + G+ P    +    
Sbjct: 431 EARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRI 490

Query: 501 EARRATGLTKEAKRI 515
            A    G   +A R+
Sbjct: 491 RAELTLGAIAKAFRL 505



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/215 (21%), Positives = 103/215 (47%), Gaps = 3/215 (1%)

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M  +GV P++   N +++   +    D +  V A M +  + P ++TY+T+++++   G 
Sbjct: 193 MASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEGR 252

Query: 369 MDKCKEIFDDMGK--AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
            DK   +  +M    +G  P+   ++++  G  R+ + E+A E++  M  S    +   +
Sbjct: 253 NDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK-KASSFTY 311

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
             +I+G  + G + +A ++  +M   G+ P + T+  ++ G  ++ Q   A+     M+A
Sbjct: 312 NPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRA 371

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            G+ P   T+  L       G  KEA  +   +++
Sbjct: 372 MGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRH 406



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 58/114 (50%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T  +++   RG    A   F  ++E G +P+ +TY  L+ AL    R    +    ++
Sbjct: 590 TYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEM 649

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            E G+ P+   +  +I+   + GN E+AM  +++M ++G+ P   T+  L KG+
Sbjct: 650 LERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYLTHKALFKGF 703


>gi|224136366|ref|XP_002326842.1| predicted protein [Populus trichocarpa]
 gi|222835157|gb|EEE73592.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 130/507 (25%), Positives = 236/507 (46%), Gaps = 9/507 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C+  V +   L+N+   RG+  +A      +I+ G  PSLVT+ T++ A   Q  
Sbjct: 175 MQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGN 234

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                ++   ++E G  P+ + +N ++N + ++ ++ +A   + +MK   + P  +T+N 
Sbjct: 235 MMEARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNI 294

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ G+   G+ E+  +LL  +S+          YN+ V   C    + EA   +  M   
Sbjct: 295 LVAGHYRYGREEDRDRLLRDLSQS-GSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEK 353

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P VV +N+I  AY++ G  ++A +    M   G+ P+  TC  +I G  K  +++EA
Sbjct: 354 GITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEA 413

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M   G+  N   F LL+ G+  + D  G   +   M+   ++PD + +S  +N 
Sbjct: 414 RDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFING 473

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
            S  G +D+  ++F  M K G  P+   Y+ L +G+      ++A  L   M   G  P+
Sbjct: 474 LSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPD 533

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           +     II+G C +G M  A +VF  M   G+ P++ T+ TL+ GY +A      +E++ 
Sbjct: 534 IFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDTVSTDEVVN 593

Query: 483 IMKAFGVHPQKSTFLL----LAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVES 538
            M A G  P  +T+ +    L   R+ +      + ++S     +          +  + 
Sbjct: 594 KMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNTVMNGVCTDV 653

Query: 539 LERLYHKEATTASYPNLLQIPNVVSSD 565
           LER       TA    +  +PNVV+++
Sbjct: 654 LER---AMIVTAKLLKMAFVPNVVTAN 677



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 120/478 (25%), Positives = 205/478 (42%), Gaps = 49/478 (10%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           +  LM   ++     EA  I   + E G +PS    T L   L       S+  ++  + 
Sbjct: 82  LDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDHGSVWKLLRGMI 141

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G  P +  FNAVI  F   G+++        M++    P    YN LI  Y   G+  
Sbjct: 142 HQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNILINAYCTRGQTF 201

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           +++  +  M   G   P+L T+  ++ A+CN+ N+ EA N+   M  +G  P+VV YNT+
Sbjct: 202 DALGWMRFMIDNG-CTPSLVTFGTVINAFCNQGNMMEARNLFDGMKEAGHIPNVVCYNTL 260

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII------------------------- 289
              Y +  +  QA  +  EM+   V P+  T  I+                         
Sbjct: 261 MNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREEDRDRLLRDLSQSGS 320

Query: 290 ----------ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
                     +SG C  G + EA++F   M E G+ P +V FN +I  +     R G++E
Sbjct: 321 LSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSIIAAY----SRAGLEE 376

Query: 340 ----VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
                  +M +F + P  +T S+++   S    + + +++  +M   G+  +  A+++L 
Sbjct: 377 KAYKAYRMMVKFGLFPSSLTCSSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLL 436

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            GY R  +   A  L   M   G HP+ V F+  I+G    G +D A +VF +M + G  
Sbjct: 437 DGYFRMGDVAGAYSLWNEMEGRGIHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFM 496

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           PN   + +L+ G+  + +   A  + + M   G+ P   T  ++       GL KE +
Sbjct: 497 PNNFVYNSLIRGFCNSGRLQEALMLEREMARKGLLPDIFTTNII-----INGLCKEGR 549



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 91/358 (25%), Positives = 171/358 (47%), Gaps = 2/358 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   EA     +++E G  P++V + +++AA +        +     + + G+ P S+  
Sbjct: 338 GWLDEAMKFLEDMLEKGITPTVVAFNSIIAAYSRAGLEEKAYKAYRMMVKFGLFPSSLTC 397

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           +++I   S+   ++EA D  ++M   GL    + +  L+ GY   G    +  L + M  
Sbjct: 398 SSLIMGLSKLWRLQEARDLLYEMIVEGLPINKAAFTLLLDGYFRMGDVAGAYSLWNEMEG 457

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G + P+   ++  +        + EA++V  +M+  G  P+   YN++   +  +G   
Sbjct: 458 RG-IHPDAVAFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQ 516

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  +  EM   G+ P+  T  III+G CKEG++K A    R M   G+ P++V +N LI
Sbjct: 517 EALMLEREMARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLI 576

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G+ +  D    DEV+  M     +PD+ TY+  ++   T   M +   + +++  AG+ 
Sbjct: 577 DGYCKAFDTVSTDEVVNKMYATGWDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVV 636

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           PD   Y+ +  G V     E+A  +   +++  F PNVV    ++S +C  G  ++ I
Sbjct: 637 PDTVTYNTVMNG-VCTDVLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKTI 693



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/330 (21%), Positives = 140/330 (42%), Gaps = 43/330 (13%)

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R    + +    + L+R +   +   EA  ++ +M   G++P       +     + G+ 
Sbjct: 71  RHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAITILFKLLLRIGDH 130

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
               +++  M H G +P  R    +I G+C++G +K        M+++   P++  +N+L
Sbjct: 131 GSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQKFKCQPDVYAYNIL 190

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVN----PDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           I  +     R    + L  M+ F ++    P ++T+ T++NA+   G M + + +FD M 
Sbjct: 191 INAYCT---RGQTFDALGWMR-FMIDNGCTPSLVTFGTVINAFCNQGNMMEARNLFDGMK 246

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI----------- 429
           +AG  P+   Y+ L  GYV+ ++  +A  L   M      P+   F  +           
Sbjct: 247 EAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVAGHYRYGREE 306

Query: 430 ------------------------ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
                                   +SG C  G +D A++  + M E G++P +  F +++
Sbjct: 307 DRDRLLRDLSQSGSLSISSLYNICVSGLCWAGWLDEAMKFLEDMLEKGITPTVVAFNSII 366

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKST 495
             YS A    +A +  ++M  FG+ P   T
Sbjct: 367 AAYSRAGLEEKAYKAYRMMVKFGLFPSSLT 396



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 64/260 (24%), Positives = 122/260 (46%), Gaps = 2/260 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + +  +N L   G   EA  +F  + + G  P+   Y +L+       R      +  ++
Sbjct: 466 AFSAFINGLSIVGLVDEAYDVFLQMSKKGFMPNNFVYNSLIRGFCNSGRLQEALMLEREM 525

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+ PD    N +IN   + G M+ A D F  M  +GL P   TYNTLI GY  A   
Sbjct: 526 ARKGLLPDIFTTNIIINGLCKEGRMKSASDVFRNMHHTGLIPDIVTYNTLIDGYCKAFDT 585

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             + ++++ M   G   P++ TYN+ +   C  + ++ A  ++ ++ ++G+ PD VTYNT
Sbjct: 586 VSTDEVVNKMYATG-WDPDITTYNIRLHGLCTGRKMSRAVMMLEELISAGVVPDTVTYNT 644

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +      +   ++A  V  ++      PN  T  +++S +CK+G  ++ + + + + E  
Sbjct: 645 VMNGVCTD-VLERAMIVTAKLLKMAFVPNVVTANLLLSHFCKQGMPEKTIMWGQKLNEIS 703

Query: 314 VHPNLVIFNLLIKGFVEIMD 333
              + +   L+ + +  I D
Sbjct: 704 FGFDEISIKLMDRAYRNIQD 723



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 120/255 (47%), Gaps = 2/255 (0%)

Query: 264 ADQAEEVIVEM--EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
            D++ EV+  M   H   + +      ++ G+ K     EAL     M+E G+ P+    
Sbjct: 58  VDRSREVVEFMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLRPSSSAI 117

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
            +L K  + I D   V ++L  M      P    ++ ++  +   G +   + +   M K
Sbjct: 118 TILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESLLCVMQK 177

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
              +PD +AY+IL   Y    +   A   +  MI++G  P++V F T+I+ +C+ G+M  
Sbjct: 178 FKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCNQGNMME 237

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A  +FD M E G  PN+  + TLM GY +AR   +A  + + MK+  V P  +TF +L  
Sbjct: 238 ARNLFDGMKEAGHIPNVVCYNTLMNGYVKARDIGQANMLYEEMKSKAVAPDCTTFNILVA 297

Query: 502 ARRATGLTKEAKRIL 516
                G  ++  R+L
Sbjct: 298 GHYRYGREEDRDRLL 312



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 47/195 (24%), Positives = 78/195 (40%), Gaps = 5/195 (2%)

Query: 331 IMDRDGVD---EVLALM--KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           ++ R GVD   EV+  M  +      D     T+M  +       +  EI   M + G++
Sbjct: 52  VIRRVGVDRSREVVEFMWKRHAEFESDFSVLDTLMRGFLKVEMGCEALEIVGRMREVGLR 111

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P + A +IL K  +R  +     +LL  MI  G  P    F  +I G+C  G +     +
Sbjct: 112 PSSSAITILFKLLLRIGDHGSVWKLLRGMIHQGPRPCNRNFNAVILGFCRKGHVKVGESL 171

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
              M +    P++  +  L+  Y    Q + A   ++ M   G  P   TF  +  A   
Sbjct: 172 LCVMQKFKCQPDVYAYNILINAYCTRGQTFDALGWMRFMIDNGCTPSLVTFGTVINAFCN 231

Query: 506 TGLTKEAKRILSKIK 520
            G   EA+ +   +K
Sbjct: 232 QGNMMEARNLFDGMK 246


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 205/426 (48%), Gaps = 7/426 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++ SL   GK +EA  +   +      P +V+Y+T++              +M  +
Sbjct: 260 SYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDM 319

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +  G+ P+   +N++I    + G   EA     +M    + P    Y TLI G+   G  
Sbjct: 320 QIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHV 379

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             + K  D M  +  + P+  TY  L++ +     + E  N+ H+M + G+KPD VTY T
Sbjct: 380 RTANKWFDEMLSK-KISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTT 438

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y + GE   A  +  EM   G+ PN  T G +I G CK G++  A      M++ G
Sbjct: 439 LIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKG 498

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV---NPDVITYSTIMNAWSTAGFMD 370
           +  N+ I+N ++ G   I     +++ + LMKE  V   +PD ITY+T+++A+   G +D
Sbjct: 499 LQLNVCIYNSMVNG---ICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDID 555

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K  ++  +M   G++P    +++L  G+      E  + LL  M+E G  P+ + + T++
Sbjct: 556 KAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C   SM+   +++ +M   GV+P+  T+  L+ G+ +AR    A  + + M   G  
Sbjct: 616 KQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYV 675

Query: 491 PQKSTF 496
           P  +++
Sbjct: 676 PTVTSY 681



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/425 (24%), Positives = 211/425 (49%), Gaps = 3/425 (0%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFN 124
           + S   V S + +++     G+ ++A  + +++   G KP+  TY +++  L  I K F 
Sbjct: 287 RSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           +   ++ ++    + PD++ +  +I+ F + G++  A   F +M    ++P   TY TLI
Sbjct: 347 A-EKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLI 405

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           +G+G  GK  E   L   M   G +KP+  TY  L+  +C    +  A+++ ++M   GM
Sbjct: 406 QGFGQGGKVIEPQNLFHEMISRG-LKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGM 464

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P++VTY  +     ++GE D A E++ EM   G+Q N      +++G CK G I++A++
Sbjct: 465 TPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIK 524

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
             + M+  G+ P+ + +  +I  +  + D D   ++L  M +  + P V+T++ +MN + 
Sbjct: 525 LMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFC 584

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G ++    +   M + GI PDA  Y+ L K +          ++   M   G  P+  
Sbjct: 585 MLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSN 644

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +  +I G C   ++  A  ++ +M E G  P + ++  L+  + + R+   A E+ + M
Sbjct: 645 TYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEM 704

Query: 485 KAFGV 489
           +  G+
Sbjct: 705 RGHGL 709



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 188/383 (49%), Gaps = 3/383 (0%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P+ I F+       E G++ EA     K+   GL  T  + N  +          E +++
Sbjct: 188 PNPIAFDIFFQVLVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSR---IANNSEGIEM 244

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
              +  E  +  N  +YN+++ + C    + EA  ++ +M      PDVV+Y+T+   Y 
Sbjct: 245 AIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYC 304

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
             GE  +A +++ +M+  G++PN  T   II   CK GK  EA +  R M    + P+ V
Sbjct: 305 HLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNV 364

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           ++  LI GF ++      ++    M   +++PD ITY+T++  +   G + + + +F +M
Sbjct: 365 VYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEM 424

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G+KPD   Y+ L   Y +  E   A  L   M++ G  PN+V +  +I G C  G +
Sbjct: 425 ISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGEL 484

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D A E+ D+M + G+  N+  + +++ G  +A    +A ++++ M+  G+ P   T+  +
Sbjct: 485 DTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTV 544

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
            +A    G   +A ++L ++ ++
Sbjct: 545 IDAYCRLGDIDKAHKLLQEMLDR 567



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 206/442 (46%), Gaps = 5/442 (1%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIMSQVEENGMDP 140
           L+E G   EA+ + + L+  G    +VT  +  A L+ I      I   +    E G+  
Sbjct: 200 LVEIGHLSEARKLLDKLLSYG---LVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISW 256

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           ++  +N +I +    G ++EA     +M     TP   +Y+T+I GY   G+ ++++KL+
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
           D M  +G +KPN  TYN ++   C      EA  V+ +M +  + PD V Y T+   + +
Sbjct: 317 DDMQIKG-LKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFK 375

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
            G    A +   EM    + P+  T   +I G+ + GK+ E       M   G+ P+ V 
Sbjct: 376 LGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVT 435

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           +  LI  + +  +      +   M +  + P+++TY  +++     G +D   E+ D+M 
Sbjct: 436 YTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMR 495

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
           K G++ +   Y+ +  G  +    E+A +L+  M  +G  P+ + +TT+I  +C  G +D
Sbjct: 496 KKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDID 555

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
           +A ++  +M + G+ P + TF  LM G+         + +L  M   G+ P   T+  L 
Sbjct: 556 KAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLM 615

Query: 501 EARRATGLTKEAKRILSKIKNK 522
           +            +I  +++N+
Sbjct: 616 KQHCIRNSMNTTTKIYKRMRNQ 637



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 1/165 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   LMN     G  ++   +   ++E G  P  +TY TL+    I+   N+   I 
Sbjct: 572 TVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIY 631

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+ PDS  +N +I    ++ N++EA   + +M E G  PT ++YN LIK +   
Sbjct: 632 KRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKK 691

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
            K  E+ +L + M   G V      YN  V     E ++    N+
Sbjct: 692 RKFXEARELFEEMRGHGLVADG-EIYNFFVDMCYEEGDVEITLNL 735



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 104/227 (45%), Gaps = 18/227 (7%)

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
           R   T K +G  PN + F++  +  VEI     + E   L+ +      +++Y  ++   
Sbjct: 178 RLIYTYKYWG--PNPIAFDIFFQVLVEI---GHLSEARKLLDK------LLSYGLVVTVD 226

Query: 364 STAGFMDKCKEIFDDMGKA-------GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           S   F+ +     + +  A       GI  +  +Y+I+     R  + ++A  LLM M  
Sbjct: 227 SCNAFLSRIANNSEGIEMAIKVFCEYGISWNTTSYNIIIYSLCRLGKVKEAHRLLMQMDF 286

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
               P+VV ++T+I G+C  G + +A+++ D M   G+ PN  T+ +++    +  + + 
Sbjct: 287 RSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFE 346

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           AE++L+ M +  + P    +  L       G  + A +   ++ +K+
Sbjct: 347 AEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKK 393


>gi|297724361|ref|NP_001174544.1| Os05g0583900 [Oryza sativa Japonica Group]
 gi|42491383|gb|AAS16889.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|255676609|dbj|BAH93272.1| Os05g0583900 [Oryza sativa Japonica Group]
          Length = 467

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/349 (31%), Positives = 181/349 (51%), Gaps = 4/349 (1%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           A++N   + G++ EA   F +M   GL P   TY  L+ GY   G+ E+   L + M R 
Sbjct: 43  ALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFEEM-RR 101

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G V+PNL TYN L+  WC       A ++  +M   G+  +VV+YNT+     ++G+   
Sbjct: 102 GGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWD 161

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A +++  M   G +P+  T  +++ GY K GK+  AL F   MK  G  P+ V +N+LI 
Sbjct: 162 AAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIA 221

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GF    D    +  L+ MKE  + P  +TY+ ++++++    M K  EI   M KAG++ 
Sbjct: 222 GFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEV 281

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           DAH Y +L +    E   + A +L  +M E G  P+ VI+  +I G+  +GS  +A+++ 
Sbjct: 282 DAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLI 341

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM---KAFGVHPQ 492
            +M + G+ PN  ++   +    +  +   AE +L  M   ++F  H Q
Sbjct: 342 MEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMETIRSFAGHHQ 390



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/357 (24%), Positives = 169/357 (47%), Gaps = 10/357 (2%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESG-----LTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           A +     +G++  A+    +  +SG     +T  T+  N   KG  +A    E+ ++ D
Sbjct: 7   AAVRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVA----EARRVFD 62

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M   G + PN  TY  L+  +       + + +  +M   G++P++ TYN +   + + 
Sbjct: 63  EMPLLG-LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRT 121

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           GE ++A  +  EM   G+  N  +   +I+G C+ GK+ +A +    M+  G  P+++ F
Sbjct: 122 GEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITF 181

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           NLL+ G+ +             MK     P  +TY+ ++  +  A  M +      DM +
Sbjct: 182 NLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKE 241

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G++P    Y+IL   + RE    KA E+L  M ++G   +   +  ++   C +G+M  
Sbjct: 242 RGLEPTKVTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKD 301

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           A ++F  M E GV P+   ++ +++GY      ++A +++  M+  G+ P  +++ L
Sbjct: 302 ARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGL 358



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 172/357 (48%), Gaps = 5/357 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+N   + G   EA+ +F+ +   G  P+ VTYT L+       +     ++  
Sbjct: 38  VTACTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQREKGFALFE 97

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G++P+   +N +I  +  +G  E A   F +M   G+     +YNTLI G    G
Sbjct: 98  EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHG 157

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  ++ KLLD+M  EG  +P++ T+N+LV  +     ++ A    ++M A+G +P  VTY
Sbjct: 158 KLWDAAKLLDMMRTEG-TRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTY 216

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   + +  +  +A   + +M+  G++P   T  I+I  + +E  + +A      M++
Sbjct: 217 NMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFARENHMGKAFEILAGMEK 276

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  +   + +L++      +     ++   M E  V P  + Y  ++  +   G   K
Sbjct: 277 AGLEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNVIYDMMIYGYGREGSSYK 336

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL--MTMIES--GFHPNVV 424
             ++  +M + G+ P++ +Y +  +   ++ + ++AE LL  M  I S  G H N +
Sbjct: 337 ALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDMETIRSFAGHHQNFI 393



 Score =  119 bits (298), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 5/254 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R V S   L+  L   GK  +A  + + +   G +PS++T+  L+       + ++    
Sbjct: 141 RNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPF 200

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
            +Q++  G  P ++ +N +I  F  + +M  A      MKE GL PT  TY  LI  +  
Sbjct: 201 FNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDSFAR 260

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
                ++ ++L  M + G ++ +  TY VLVRA C E N+ +A  +   M   G++P  V
Sbjct: 261 ENHMGKAFEILAGMEKAG-LEVDAHTYGVLVRALCMEGNMKDARKLFQSMGEKGVEPSNV 319

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA---LRFA 306
            Y+ +   Y + G + +A ++I+EM   G+ PN  + G+ I   CK+ K +EA   L   
Sbjct: 320 IYDMMIYGYGREGSSYKALKLIMEMRQKGLIPNSASYGLTIRVLCKDDKCQEAEALLDDM 379

Query: 307 RTMKEY-GVHPNLV 319
            T++ + G H N +
Sbjct: 380 ETIRSFAGHHQNFI 393



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/220 (29%), Positives = 109/220 (49%), Gaps = 6/220 (2%)

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
           C  +++G CK G + EA R    M   G+ PN V +  L+ G+     R   ++  AL +
Sbjct: 41  CTALVNGCCKGGDVAEARRVFDEMPLLGLAPNEVTYTALMHGYFTHGQR---EKGFALFE 97

Query: 346 EFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
           E R   V P++ TY+ ++  W   G  ++ + +FD+M   GI  +  +Y+ L  G  R  
Sbjct: 98  EMRRGGVEPNLYTYNCLIGEWCRTGEFERARSLFDEMPVRGIVRNVVSYNTLIAGLCRHG 157

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           +   A +LL  M   G  P+++ F  ++ G+   G M  A+  F++M   G  P+  T+ 
Sbjct: 158 KLWDAAKLLDMMRTEGTRPSIITFNLLVDGYGKAGKMSNALPFFNQMKAAGFQPSAVTYN 217

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            L+ G+  AR   RA   L  MK  G+ P K T+ +L ++
Sbjct: 218 MLIAGFCRARDMTRANRALSDMKERGLEPTKVTYTILIDS 257



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 130/304 (42%), Gaps = 1/304 (0%)

Query: 220 VRAWCNEKNITEAWNVMHKMAASG-MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           VR  C   ++  A  ++ +   SG    DV     +     + G+  +A  V  EM   G
Sbjct: 9   VRRLCAAGDVRSALAMLARGTKSGDAALDVTACTALVNGCCKGGDVAEARRVFDEMPLLG 68

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           + PN  T   ++ GY   G+ ++       M+  GV PNL  +N LI  +    + +   
Sbjct: 69  LAPNEVTYTALMHGYFTHGQREKGFALFEEMRRGGVEPNLYTYNCLIGEWCRTGEFERAR 128

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            +   M    +  +V++Y+T++      G +    ++ D M   G +P    +++L  GY
Sbjct: 129 SLFDEMPVRGIVRNVVSYNTLIAGLCRHGKLWDAAKLLDMMRTEGTRPSIITFNLLVDGY 188

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +  +   A      M  +GF P+ V +  +I+G+C    M RA      M E G+ P  
Sbjct: 189 GKAGKMSNALPFFNQMKAAGFQPSAVTYNMLIAGFCRARDMTRANRALSDMKERGLEPTK 248

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+  L+  ++      +A EIL  M+  G+     T+ +L  A    G  K+A+++   
Sbjct: 249 VTYTILIDSFARENHMGKAFEILAGMEKAGLEVDAHTYGVLVRALCMEGNMKDARKLFQS 308

Query: 519 IKNK 522
           +  K
Sbjct: 309 MGEK 312


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 215/434 (49%), Gaps = 1/434 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  CR ++RS  +L+N L++ G P  A  ++  +   G  P   T   +  A     R
Sbjct: 174 MGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGR 233

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                  + ++E  G++ + + ++AV++ +   G  E+A      ++  GL+P   TY  
Sbjct: 234 VAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTL 293

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+KGY   G+ EE+ +++  M   G++  +   Y +++  +C    + +A  V ++M  +
Sbjct: 294 LVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDA 353

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+  ++  YNT+     + G  ++ ++V+ EME  G++P+  +   +I GYC+EG +++A
Sbjct: 354 GIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKA 413

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
               R M   G+    + +N L+KGF  +   D    +  LM +  V P+ I+ ST+++ 
Sbjct: 414 FEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDG 473

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              AG  ++   ++ +    G+  +   ++ +  G  +     +AEELL  M E    P+
Sbjct: 474 LFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPD 533

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            + + T+  G+C  G +  A  + +KM   G +P+++ F + + G+  A+Q  +  +I  
Sbjct: 534 SLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHS 593

Query: 483 IMKAFGVHPQKSTF 496
            M A G+ P   T+
Sbjct: 594 EMSARGLSPNLVTY 607



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 115/471 (24%), Positives = 212/471 (45%), Gaps = 23/471 (4%)

Query: 34  AKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVR-------------------- 73
            +  +PG    +Y   +     P       M K  CR  R                    
Sbjct: 194 VQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNL 253

Query: 74  -SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
            +   +M+     G  ++A+ I  +L   G  P++VTYT L+       R      ++ +
Sbjct: 254 VAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKE 313

Query: 133 VEENG-MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++E G +  D + +  +IN + + G M++A     +M+++G+      YNT+I G    G
Sbjct: 314 MKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLG 373

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE  K+L  M   G ++P+  +YN L+  +C E ++ +A+ +   M  +G+    +TY
Sbjct: 374 RMEEVQKVLQEMEDVG-MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTY 432

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   +      D A  +   M   GV PN  +C  ++ G  K GK ++AL   +    
Sbjct: 433 NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLA 492

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  N++ FN +I G  +I      +E+L  MKE R  PD +TY T+ + +   G +  
Sbjct: 493 RGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGT 552

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + + M   G  P    ++    G+   ++  K  ++   M   G  PN+V +  +I+
Sbjct: 553 ATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIA 612

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           GWC +G++  A  ++ +M  +G++PN+     LM  + +  +   A  +LQ
Sbjct: 613 GWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQ 663



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 219/432 (50%), Gaps = 17/432 (3%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDP--------------DSIFFNAVI 149
           +PSLV++  LL  L   +RF+   +++S +  +  +P               ++ F+ ++
Sbjct: 97  RPSLVSHAQLLHILARARRFHDARALLSSLPPHA-EPLFPHLAEVYRDFTFSAVSFDLLL 155

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
            A +++G +  A++ F  M + G  P+  + N L+     +G P  +  +   M R   V
Sbjct: 156 RAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM-RIAGV 214

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            P+  T  ++ +A+C +  + +A   + +M   G++ ++V Y+ +   Y   G  + A  
Sbjct: 215 LPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARR 274

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG-VHPNLVIFNLLIKGF 328
           ++  ++  G+ PN  T  +++ GYCK+G+++EA R  + MKE G +  + V + ++I G+
Sbjct: 275 ILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGY 334

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +    D    V   M++  ++ ++  Y+T++N     G M++ +++  +M   G++PD 
Sbjct: 335 CQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDK 394

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
           ++Y+ L  GY RE    KA E+   M+ +G     + + T++ G+CS  ++D A+ ++  
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M + GV+PN  +  TL+ G  +A +  +A  + +   A G+     TF  +       G 
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514

Query: 509 TKEAKRILSKIK 520
             EA+ +L ++K
Sbjct: 515 MAEAEELLDRMK 526



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 217/437 (49%), Gaps = 4/437 (0%)

Query: 88  PQEAQAIFNNLIE--GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           P  A+ +F +L E       S V++  LL A     + +S  ++   + + G  P     
Sbjct: 127 PPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSC 186

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++N   +SG+   A   + +M+ +G+ P   T   + K Y   G+  ++V+ ++ M  
Sbjct: 187 NRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEG 246

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G ++ NL  Y+ ++  +C      +A  ++  +   G+ P+VVTY  +   Y ++G  +
Sbjct: 247 MG-LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRME 305

Query: 266 QAEEVIVEMEHNG-VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           +AE V+ EM+  G +  +    G++I+GYC+ G++ +A R    M++ G+H NL ++N +
Sbjct: 306 EAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTM 365

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G  ++   + V +VL  M++  + PD  +Y+T+++ +   G M K  E+   M + G+
Sbjct: 366 INGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGL 425

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
                 Y+ L KG+      + A  L   M++ G  PN +  +T++ G    G  ++A+ 
Sbjct: 426 AATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALN 485

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           ++ +    G++ N+ TF T++ G  +  +   AEE+L  MK     P   T+  L +   
Sbjct: 486 LWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYC 545

Query: 505 ATGLTKEAKRILSKIKN 521
             G    A  +++K+++
Sbjct: 546 KLGQLGTATHLMNKMEH 562



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/503 (22%), Positives = 224/503 (44%), Gaps = 62/503 (12%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N   +RG+  +A  + N + + G   +L  Y T++  L    R   +  ++ ++E+ G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M PD   +N +I+ +   G+M +A +    M  +GL  TT TYNTL+KG+      ++++
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L  LM + G V PN  + + L+          +A N+  +  A G+  +V+T+NT+   
Sbjct: 450 RLWFLMLKRG-VAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVING 508

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G   +AEE++  M+     P+  T   +  GYCK G++  A      M+  G  P+
Sbjct: 509 LCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPS 568

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           + +FN  I G         V+++ + M    ++P+++TY  ++  W   G + +   ++ 
Sbjct: 569 VEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYF 628

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP---------------- 421
           +M   G+ P+    S L   + +E + ++A  +L  ++     P                
Sbjct: 629 EMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVV 688

Query: 422 ---------------NVVIF------------------------------TTIISGWCSD 436
                          NV+IF                              +++I G  + 
Sbjct: 689 DTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAAS 748

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           GS+D A  + D M   G++PN+ T+ +L++G  ++ +  RA  +   +++ G+ P   T+
Sbjct: 749 GSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITY 808

Query: 497 LLLAEARRATGLTKEAKRILSKI 519
             L +     G T EA ++  K+
Sbjct: 809 NTLIDEYCKEGKTTEAFKLKQKM 831



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 203/443 (45%), Gaps = 39/443 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L++     G  ++A  +   ++  G   + +TY TLL      K F S+H+I   +
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLL------KGFCSLHAIDDAL 449

Query: 134 E------ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
                  + G+ P+ I  + +++   ++G  E+A++ + +    GL     T+NT+I G 
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G+  E+ +LLD M +E    P+  TY  L   +C    +  A ++M+KM   G  P 
Sbjct: 510 CKIGRMAEAEELLDRM-KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPS 568

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           V  +N+  T +    +  +  ++  EM   G+ PN  T G +I+G+CKEG + EA     
Sbjct: 569 VEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYF 628

Query: 308 TMKEYGVHPNLVIF----------------NLLIKGFVEI----------MDRDGVDEVL 341
            M   G++PN+ I                 NL+++  V I          ++ D +  V+
Sbjct: 629 EMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVV 688

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             + +   +   + ++ I+     +G +   K +F+ +      PD   YS L  G    
Sbjct: 689 DTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAAS 748

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
              ++A  L   M+ +G  PN++ + ++I G C  G + RA+ +F+K+   G+SPN  T+
Sbjct: 749 GSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITY 808

Query: 462 ETLMWGYSEARQPWRAEEILQIM 484
            TL+  Y +  +   A ++ Q M
Sbjct: 809 NTLIDEYCKEGKTTEAFKLKQKM 831



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/434 (23%), Positives = 203/434 (46%), Gaps = 26/434 (5%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + L++ L + GK ++A  ++   +  G   +++T+ T++  L    R      ++ ++
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +E    PDS+ +  + + + + G +  A     KM+  G  P+   +N+ I G+ IA + 
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            +   +   MS  G + PNL TY  L+  WC E N+ EA N+  +M  +GM P+V   + 
Sbjct: 586 HKVNDIHSEMSARG-LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSA 644

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           + + + + G+ D+A  V+ ++ +  + P     G  IS      +I +      T+ +  
Sbjct: 645 LMSCFYKEGKVDEANLVLQKLVNIDMIP-----GCSISTI----EIDKISHVVDTIADGN 695

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
            H   V++N++I G  +         +   ++  R  PD  TYS++++  + +G +D+  
Sbjct: 696 PHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAF 755

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            + D M  AG+ P+   Y+ L  G  +  +  +A  L   +   G  PN + + T+I  +
Sbjct: 756 SLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEY 815

Query: 434 CSDGS----------------MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           C +G                 M+ AI++ D+M E+ V PN  T+ TL+ GY ++      
Sbjct: 816 CKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEI 875

Query: 478 EEILQIMKAFGVHP 491
            ++   M   G+ P
Sbjct: 876 SKLYDEMHIRGLLP 889



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/171 (25%), Positives = 80/171 (46%), Gaps = 21/171 (12%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L++     G   EA ++ + ++  G  P+++TY +L+  L    + +   ++ +++
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL 796

Query: 134 EENGMDPDSIFFNAVINAFS----------------ESGNMEEAMDTFWKMKESGLTPTT 177
           +  G+ P+ I +N +I+ +                 E G MEEA+    +M E+ + P  
Sbjct: 797 QSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLDQMIENNVDPNY 856

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL-----RTYNVLVRAW 223
            TY TLI GY  +G  EE  KL D M   G +  N      R+  V+V  W
Sbjct: 857 ITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPTNWIGNWKRSDPVVVNNW 907


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 209/430 (48%), Gaps = 8/430 (1%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           F  +I  G  PS+     +L  L   +  N    +   +  +G+ P  I FN ++++  +
Sbjct: 227 FEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFK 286

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG-NVKPNL 213
           +G++E     + +MK   +  +  TYN LI G+  +GK EE+ +    M R G  V P  
Sbjct: 287 AGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTP-- 344

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            ++N L+  +C +    EAW V  +M  +G+ P   TYN    A  + G  D A E++  
Sbjct: 345 YSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSS 404

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M      P+  +   ++ GY K  K  EA      +K   ++P++V +N LI G  E  +
Sbjct: 405 M----AAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGN 460

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            +G   +   M    + PDVITY+T++  +   G +    EI+D+M + GIKPD +AY+ 
Sbjct: 461 LEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTT 520

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFH-PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
              G +R  + EKA  L   M+    H P++ I+   I G C  G++++AIE   K+   
Sbjct: 521 RTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRV 580

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G+ P+  T+ T++ GY E  +   A ++   M +  + P   T+ +L       G  ++A
Sbjct: 581 GLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQA 640

Query: 513 KRILSKIKNK 522
            +  +++K +
Sbjct: 641 FQYSTEMKKR 650



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 119/489 (24%), Positives = 223/489 (45%), Gaps = 41/489 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +VR+   ++  L +     +AQ ++  ++  G  P+++T+ T+L +         +  I 
Sbjct: 238 SVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIW 297

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++   ++   + +N +IN FS+SG MEEA      M+ SG   T  ++N LI+GY   
Sbjct: 298 LEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQ 357

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +E+  + D M   G + P   TYN+ +RA C    I +A  ++  MAA    PDVV+
Sbjct: 358 GLFDEAWGVTDEMLNAG-IYPTTSTYNIYIRALCEFGRIDDARELLSSMAA----PDVVS 412

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+   Y +  +  +A  +  +++   + P+  T   +I G C+ G ++ A R    M 
Sbjct: 413 YNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMT 472

Query: 311 EYGVHPNLVIFNLLIKGFV---------EIMDR--------DGVDEVLALMKEFRVN--- 350
              ++P+++ +  L+KGFV         EI D         DG       + E R+    
Sbjct: 473 SQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLGDSE 532

Query: 351 ----------------PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
                           PD+  Y+  ++     G ++K  E    + + G+ PD   Y+ +
Sbjct: 533 KAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTV 592

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            +GY+ +   + A +L   M+     P+V+ +  +I G    G +++A +   +M + GV
Sbjct: 593 IRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGV 652

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            PN+ T   L+ G  +A     A   L  M+  G+ P K ++ +L          +E  +
Sbjct: 653 RPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVK 712

Query: 515 ILSKIKNKE 523
           +  ++ +KE
Sbjct: 713 LYKEMLDKE 721



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 161/332 (48%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   LM+  I+  K  EA  +F++L  G   PS+VTY TL+  L           +  
Sbjct: 410 VVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKE 469

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++    + PD I +  ++  F ++GN+  A + + +M   G+ P    Y T   G    G
Sbjct: 470 EMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTTRTVGELRLG 529

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E++ +L + M  E +  P+L  YNV +   C   N+ +A     K+   G+ PD VTY
Sbjct: 530 DSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTY 589

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   Y + G    A ++  EM    + P+  T  ++I G+ K G++++A +++  MK+
Sbjct: 590 TTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKK 649

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV PN++  N L+ G  +  + D     L  M+E  ++P+  +Y+ +++        ++
Sbjct: 650 RGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEE 709

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
             +++ +M    I+PD + +  L K   ++ E
Sbjct: 710 VVKLYKEMLDKEIEPDGYTHRALFKHLEKDHE 741



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 153/341 (44%), Gaps = 18/341 (5%)

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK--P 246
           I  KPE + +  + + R+ +VK + + +  ++        ++EA+ V  +    GM    
Sbjct: 131 IRVKPEIAFRFFNWIQRQSDVKQSRQAFAAMLEILAENDLMSEAYLVAERSINLGMHEID 190

Query: 247 DVVTYNTIAT------------AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           D++                    Y +   A++      +M   G  P+ R C I++    
Sbjct: 191 DLLIDGNFDKLVALKLLDLLLWVYTKKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLR 250

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
               + +A     TM  +G+ P ++ FN ++    +  D + VD++   MK   +    +
Sbjct: 251 DSRMMNKAQEVYETMVMHGIMPTVITFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEV 310

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           TY+ ++N +S +G M++ +    DM ++G     ++++ L +GY ++   ++A  +   M
Sbjct: 311 TYNILINGFSKSGKMEEARRFHGDMQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEM 370

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           + +G +P    +   I   C  G +D A E+   M     +P++ ++ TLM GY + R+ 
Sbjct: 371 LNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSM----AAPDVVSYNTLMHGYIKMRKF 426

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
             A  +   +KA  ++P   T+  L +    +G  + A+R+
Sbjct: 427 VEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRL 467


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 215/434 (49%), Gaps = 1/434 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  CR ++RS  +L+N L++ G P  A  ++  +   G  P   T   +  A     R
Sbjct: 174 MGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGR 233

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                  + ++E  G++ + + ++AV++ +   G  E+A      ++  GL+P   TY  
Sbjct: 234 VAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTL 293

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+KGY   G+ EE+ +++  M   G++  +   Y +++  +C    + +A  V ++M  +
Sbjct: 294 LVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDA 353

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+  ++  YNT+     + G  ++ ++V+ EME  G++P+  +   +I GYC+EG +++A
Sbjct: 354 GIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKA 413

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
               R M   G+    + +N L+KGF  +   D    +  LM +  V P+ I+ ST+++ 
Sbjct: 414 FEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDG 473

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              AG  ++   ++ +    G+  +   ++ +  G  +     +AEELL  M E    P+
Sbjct: 474 LFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPD 533

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            + + T+  G+C  G +  A  + +KM   G +P+++ F + + G+  A+Q  +  +I  
Sbjct: 534 SLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHS 593

Query: 483 IMKAFGVHPQKSTF 496
            M A G+ P   T+
Sbjct: 594 EMSARGLSPNLVTY 607



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/471 (24%), Positives = 212/471 (45%), Gaps = 23/471 (4%)

Query: 34  AKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVR-------------------- 73
            +  +PG    +Y   +     P       M K  CR  R                    
Sbjct: 194 VQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNL 253

Query: 74  -SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
            +   +M+     G  ++A+ I  +L   G  P++VTYT L+       R      ++ +
Sbjct: 254 VAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKE 313

Query: 133 VEENG-MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++E G +  D + +  +IN + + G M++A     +M+++G+      YNT+I G    G
Sbjct: 314 MKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLG 373

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE  K+L  M   G ++P+  +YN L+  +C E ++ +A+ +   M  +G+    +TY
Sbjct: 374 RMEEVQKVLQEMEDVG-MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTY 432

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   +      D A  +   M   GV PN  +C  ++ G  K GK ++AL   +    
Sbjct: 433 NTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLA 492

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  N++ FN +I G  +I      +E+L  MKE R  PD +TY T+ + +   G +  
Sbjct: 493 RGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGT 552

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + + M   G  P    ++    G+   ++  K  ++   M   G  PN+V +  +I+
Sbjct: 553 ATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIA 612

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           GWC +G++  A  ++ +M  +G++PN+     LM  + +  +   A  +LQ
Sbjct: 613 GWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQ 663



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/432 (24%), Positives = 219/432 (50%), Gaps = 17/432 (3%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDP--------------DSIFFNAVI 149
           +PSLV++  LL  L   +RF+   +++S +  +  +P               ++ F+ ++
Sbjct: 97  RPSLVSHAQLLHILARARRFHDARALLSSLPPHA-EPLFPHLAEVYRDFTFSAVSFDLLL 155

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
            A +++G +  A++ F  M + G  P+  + N L+     +G P  +  +   M R   V
Sbjct: 156 RAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQM-RIAGV 214

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            P+  T  ++ +A+C +  + +A   + +M   G++ ++V Y+ +   Y   G  + A  
Sbjct: 215 LPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDARR 274

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG-VHPNLVIFNLLIKGF 328
           ++  ++  G+ PN  T  +++ GYCK+G+++EA R  + MKE G +  + V + ++I G+
Sbjct: 275 ILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMINGY 334

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +    D    V   M++  ++ ++  Y+T++N     G M++ +++  +M   G++PD 
Sbjct: 335 CQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPDK 394

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
           ++Y+ L  GY RE    KA E+   M+ +G     + + T++ G+CS  ++D A+ ++  
Sbjct: 395 YSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFL 454

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M + GV+PN  +  TL+ G  +A +  +A  + +   A G+     TF  +       G 
Sbjct: 455 MLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGR 514

Query: 509 TKEAKRILSKIK 520
             EA+ +L ++K
Sbjct: 515 MAEAEELLDRMK 526



 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 211/447 (47%), Gaps = 33/447 (7%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + L++ L + GK ++A  ++   +  G   +++T+ T++  L    R      ++ ++
Sbjct: 466 SCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRM 525

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +E    PDS+ +  + + + + G +  A     KM+  G  P+   +N+ I G+ IA + 
Sbjct: 526 KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW 585

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            +   +   MS  G + PNL TY  L+  WC E N+ EA N+  +M  +GM P+V   + 
Sbjct: 586 HKVNDIHSEMSARG-LSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSA 644

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI------------------------- 288
           + + + + G+ D+A  V+ ++ +  + P      I                         
Sbjct: 645 LMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWN 704

Query: 289 -IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---M 344
            II G CK G+I +A     +++     P+   ++ LI G         +DE  +L   M
Sbjct: 705 VIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAA---SGSIDEAFSLRDVM 761

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
               + P++ITY++++     +G + +   +F+ +   GI P+   Y+ L   Y +E + 
Sbjct: 762 LSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKT 821

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            +A +L   M+E G  P V+ ++ +I G C+ G M+ AI++ D+M E+ V PN  T+ TL
Sbjct: 822 TEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTL 881

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHP 491
           + GY ++       ++   M   G+ P
Sbjct: 882 IHGYIKSGNMEEISKLYDEMHIRGLLP 908



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 217/437 (49%), Gaps = 4/437 (0%)

Query: 88  PQEAQAIFNNLIE--GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           P  A+ +F +L E       S V++  LL A     + +S  ++   + + G  P     
Sbjct: 127 PPHAEPLFPHLAEVYRDFTFSAVSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSC 186

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++N   +SG+   A   + +M+ +G+ P   T   + K Y   G+  ++V+ ++ M  
Sbjct: 187 NRLLNKLVQSGDPGMAAMVYGQMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEG 246

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G ++ NL  Y+ ++  +C      +A  ++  +   G+ P+VVTY  +   Y ++G  +
Sbjct: 247 MG-LEVNLVAYHAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRME 305

Query: 266 QAEEVIVEMEHNG-VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           +AE V+ EM+  G +  +    G++I+GYC+ G++ +A R    M++ G+H NL ++N +
Sbjct: 306 EAERVVKEMKETGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTM 365

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G  ++   + V +VL  M++  + PD  +Y+T+++ +   G M K  E+   M + G+
Sbjct: 366 INGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGL 425

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
                 Y+ L KG+      + A  L   M++ G  PN +  +T++ G    G  ++A+ 
Sbjct: 426 AATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALN 485

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           ++ +    G++ N+ TF T++ G  +  +   AEE+L  MK     P   T+  L +   
Sbjct: 486 LWKETLARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYC 545

Query: 505 ATGLTKEAKRILSKIKN 521
             G    A  +++K+++
Sbjct: 546 KLGQLGTATHLMNKMEH 562



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 114/503 (22%), Positives = 224/503 (44%), Gaps = 62/503 (12%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N   +RG+  +A  + N + + G   +L  Y T++  L    R   +  ++ ++E+ G
Sbjct: 330 MINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVG 389

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M PD   +N +I+ +   G+M +A +    M  +GL  TT TYNTL+KG+      ++++
Sbjct: 390 MRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDAL 449

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L  LM + G V PN  + + L+          +A N+  +  A G+  +V+T+NT+   
Sbjct: 450 RLWFLMLKRG-VAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVING 508

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G   +AEE++  M+     P+  T   +  GYCK G++  A      M+  G  P+
Sbjct: 509 LCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPS 568

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           + +FN  I G         V+++ + M    ++P+++TY  ++  W   G + +   ++ 
Sbjct: 569 VEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYF 628

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP---------------- 421
           +M   G+ P+    S L   + +E + ++A  +L  ++     P                
Sbjct: 629 EMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVV 688

Query: 422 ---------------NVVIF------------------------------TTIISGWCSD 436
                          NV+IF                              +++I G  + 
Sbjct: 689 DTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAAS 748

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           GS+D A  + D M   G++PN+ T+ +L++G  ++ +  RA  +   +++ G+ P   T+
Sbjct: 749 GSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITY 808

Query: 497 LLLAEARRATGLTKEAKRILSKI 519
             L +     G T EA ++  K+
Sbjct: 809 NTLIDEYCKEGKTTEAFKLKQKM 831



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 118/478 (24%), Positives = 219/478 (45%), Gaps = 39/478 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L++     G  ++A  +   ++  G   + +TY TLL      K F S+H+I   +
Sbjct: 396 SYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLL------KGFCSLHAIDDAL 449

Query: 134 E------ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
                  + G+ P+ I  + +++   ++G  E+A++ + +    GL     T+NT+I G 
Sbjct: 450 RLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGL 509

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G+  E+ +LLD M +E    P+  TY  L   +C    +  A ++M+KM   G  P 
Sbjct: 510 CKIGRMAEAEELLDRM-KELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPS 568

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           V  +N+  T +    +  +  ++  EM   G+ PN  T G +I+G+CKEG + EA     
Sbjct: 569 VEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYF 628

Query: 308 TMKEYGVHPNLVIF----------------NLLIKGFVEI----------MDRDGVDEVL 341
            M   G++PN+ I                 NL+++  V I          ++ D +  V+
Sbjct: 629 EMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSISTIEIDKISHVV 688

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             + +   +   + ++ I+     +G +   K +F+ +      PD   YS L  G    
Sbjct: 689 DTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAAS 748

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
              ++A  L   M+ +G  PN++ + ++I G C  G + RA+ +F+K+   G+SPN  T+
Sbjct: 749 GSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITY 808

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            TL+  Y +  +   A ++ Q M   G+ P   T+ +L       G  +EA ++L ++
Sbjct: 809 NTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQM 866



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 47/151 (31%), Positives = 70/151 (46%), Gaps = 5/151 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L + GK   A  +FN L   G  P+ +TY TL+     + +      +  ++ E G
Sbjct: 776 LIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG 835

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P  I ++ +I      G MEEA+    +M E+ + P   TY TLI GY  +G  EE  
Sbjct: 836 IQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEIS 895

Query: 198 KLLDLMSREGNVKPNL-----RTYNVLVRAW 223
           KL D M   G +  N      R+  V+V  W
Sbjct: 896 KLYDEMHIRGLLPTNWIGNWKRSDPVVVNNW 926


>gi|218191264|gb|EEC73691.1| hypothetical protein OsI_08267 [Oryza sativa Indica Group]
          Length = 751

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 194/363 (53%), Gaps = 17/363 (4%)

Query: 83  IERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS 142
           +++G+ Q AQ +F  +++   +P +VTY  L +          +  ++ ++ + G++P+S
Sbjct: 376 LDKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQGLEPNS 435

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           + +   I  F   GN+ EA   F  ++E G+      Y++++ GY ++G  + +  L   
Sbjct: 436 LTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVR 495

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           ++R+GN+  +  + + L+   C   N+  A NV   M    + PDV++Y+ + + Y QNG
Sbjct: 496 VARQGNLVDHF-SCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNG 554

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
           + D+A     +M   G+  +     I+++GYCK G+++EA +    M   G+ P+++ + 
Sbjct: 555 DMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYT 614

Query: 323 LLIKGFVE----------------IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
           +L+ G ++                 + R   +++L+ MK+ ++ PDV  Y+ +++    A
Sbjct: 615 VLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKA 674

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
            ++ + +E+FD+M + G+ PDA+AY+ L  GY  + E  KAE+LL  MI+ G  P+ + F
Sbjct: 675 EYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTF 734

Query: 427 TTI 429
           + +
Sbjct: 735 SVL 737



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 216/465 (46%), Gaps = 43/465 (9%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI--MSQVEE 135
           +M+ L +  +  EA+ +  N    G  P +  Y+ L+ +    K  N I ++     +  
Sbjct: 279 VMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYC--KMGNLIKAVDHYEAMVS 336

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL---------------------- 173
           +G++ +    + ++  F + G   E +  F K K+SGL                      
Sbjct: 337 HGIETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLDKGEMQNAQQVFEEMLKANI 396

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
            P   TYN L  G+  +G   E   LLD M+ +G ++PN  TY + +  +C   N++EA 
Sbjct: 397 EPDIVTYNILASGFCKSGLVMEVFDLLDRMADQG-LEPNSLTYGIAIVGFCRGGNLSEAE 455

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
            + + +   G+    V Y+++   Y  +G  D A  + V +   G   +  +C  +I+  
Sbjct: 456 VLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDL 515

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           C+ G ++ A    + M E+ V P+++ ++ LI  + +  D D        M +  ++ DV
Sbjct: 516 CRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDV 575

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE----- 408
           I Y+ +MN +  AG + +  ++F  M   GIKPD  AY++L  G+++E   +  E     
Sbjct: 576 IVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKE 635

Query: 409 -----------ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
                      +LL +M +    P+V  +T +I G C    +  A E+FD+M + G++P+
Sbjct: 636 RRSFLLRANHNKLLSSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPD 695

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
              +  L+ GY    +  +AE++LQ M   G+ P + TF +L ++
Sbjct: 696 AYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQS 740



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/480 (21%), Positives = 207/480 (43%), Gaps = 36/480 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +  SL +  K  EA  ++  + E G KP    Y++ L  L   ++++  + I+ 
Sbjct: 203 VYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGYSSFLIGLCDCRKYDLAYVILQ 262

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++    +  +++ +N V++   +   ++EA          G  P    Y+ LI+ Y   G
Sbjct: 263 EINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMG 322

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              ++V   + M   G ++ N    + L++ +      +E      K   SG+  D    
Sbjct: 323 NLIKAVDHYEAMVSHG-IETNCHIVSYLLQCFRKLGMTSEVIAYFLKFKDSGLHLD---- 377

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
                     GE   A++V  EM    ++P+  T  I+ SG+CK G + E       M +
Sbjct: 378 ---------KGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMAD 428

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN + + + I GF    +    + +  +++E  ++   + YS+++  +  +G+ D 
Sbjct: 429 QGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDH 488

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F  + + G   D  + S L     R    + A  +   M+E    P+V+ ++ +IS
Sbjct: 489 AYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLIS 548

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            +C +G MD+A   F  M + G+S ++  +  LM GY +A +   A ++   M   G+ P
Sbjct: 549 IYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKP 608

Query: 492 QKSTFLLL----------------AEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP 535
               + +L                A+ RR+  L     ++LS +K      +M+ E D+P
Sbjct: 609 DVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMK------DMQIEPDVP 662



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 84/393 (21%), Positives = 178/393 (45%), Gaps = 18/393 (4%)

Query: 65  NKESCRTVRSMTKLMNSLIERG----KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           ++ +C T  S++ +++ LI+        Q    +F+ +   G  PS+ T+  LL  +   
Sbjct: 122 HRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGICRLGVVPSVWTWNLLLKFIAET 181

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
             +  + +  ++++   + PD   F  V  +  ++  ++EA+  + +M E G+ P    Y
Sbjct: 182 GEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKVDEALQVWAEMTEMGVKPDARGY 241

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           ++ + G     K + +  +L  ++RE  V      YN+++   C E  + EA  ++   A
Sbjct: 242 SSFLIGLCDCRKYDLAYVILQEINRE-KVPVEAMAYNMVMDGLCKEMRLDEAEKLLENKA 300

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
             G  PDV  Y+ +  +Y + G   +A +    M  +G++ N      ++  + K G   
Sbjct: 301 RQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGMTS 360

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           E + +    K+ G+H        L KG     +     +V   M +  + PD++TY+ + 
Sbjct: 361 EVIAYFLKFKDSGLH--------LDKG-----EMQNAQQVFEEMLKANIEPDIVTYNILA 407

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           + +  +G + +  ++ D M   G++P++  Y I   G+ R     +AE L   + E G  
Sbjct: 408 SGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGID 467

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
              V++++++ G+   G  D A  +F ++   G
Sbjct: 468 HIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQG 500



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 111/243 (45%), Gaps = 17/243 (6%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S +KL+N L   G  Q A  +   ++E    P +++Y+ L++        +  H     +
Sbjct: 507 SCSKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDM 566

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY------ 187
            + G+  D I +  ++N + ++G ++EA   F +M   G+ P    Y  L+ G+      
Sbjct: 567 VQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQ 626

Query: 188 ----GIAGKPEESV------KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
               GIA +    +      KLL  M ++  ++P++  Y VL+   C  + + EA  +  
Sbjct: 627 QGWEGIAKERRSFLLRANHNKLLSSM-KDMQIEPDVPCYTVLIDGKCKAEYLVEARELFD 685

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           +M   G+ PD   Y  +   Y   GE  +AE+++ EM   G++P+  T  ++     +  
Sbjct: 686 EMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSR 745

Query: 298 KIK 300
           KI+
Sbjct: 746 KIQ 748


>gi|218191262|gb|EEC73689.1| hypothetical protein OsI_08260 [Oryza sativa Indica Group]
          Length = 595

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 195/370 (52%), Gaps = 17/370 (4%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L+N    +G+ Q AQ +F  +++   +P +VTY  L +          +  ++ ++ +
Sbjct: 144 TCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMAD 203

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++P+S+ +   I  F   GN+ EA   F  ++E G+      Y++++ GY ++G  + 
Sbjct: 204 QGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDH 263

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  L   ++R+GN+  +    + L+   C   N+  A NV   M    + PDV++Y+ + 
Sbjct: 264 AYMLFVRVARQGNLVDHFSC-SKLINDLCRVGNVQGASNVCKIMLEHNVVPDVISYSKLI 322

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           + Y QNG+ D+A     +M   G+  +     I+++GYCK G+++EA +    M   G+ 
Sbjct: 323 SIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIK 382

Query: 316 PNLVIFNLLIKGFVE----------------IMDRDGVDEVLALMKEFRVNPDVITYSTI 359
           P+++ + +L+ G ++                 + R   +++L+ MK+ ++ PDV  Y+ +
Sbjct: 383 PDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVL 442

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++    A ++ + +E+FD+M + G+ PDA+AY+ L  GY  + E  KAE+LL  MI+ G 
Sbjct: 443 IDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGI 502

Query: 420 HPNVVIFTTI 429
            P+ + F+ +
Sbjct: 503 EPDELTFSEV 512



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 225/479 (46%), Gaps = 24/479 (5%)

Query: 68  SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           +C  V  + +    L   G   E  A F    + G     V Y   +         N   
Sbjct: 69  NCHIVSYLLQCFRKL---GMTSEVIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAV 125

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            ++++++  G+ PD I +  +IN +   G M+ A   F +M ++ + P   TYN L  G+
Sbjct: 126 KLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGF 185

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
             +G   E   LLD M+ +G ++PN  TY + +  +C   N++EA  + + +   G+   
Sbjct: 186 CKSGLVMEVFDLLDRMADQG-LEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHI 244

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
            V Y+++   Y  +G  D A  + V +   G   +  +C  +I+  C+ G ++ A    +
Sbjct: 245 EVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCK 304

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M E+ V P+++ ++ LI  + +  D D        M +  ++ DVI Y+ +MN +  AG
Sbjct: 305 IMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCKAG 364

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE----------------ELL 411
            + +  ++F  M   GIKPD  AY++L  G+++E   +  E                +LL
Sbjct: 365 RLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLL 424

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
            +M +    P+V  +T +I G C    +  A E+FD+M + G++P+   +  L+ GY   
Sbjct: 425 SSMKDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQ 484

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTF--LLLAEARRATGLTK--EAKRILSKIKNKERTN 526
            +  +AE++LQ M   G+ P + TF  + +A+   +  + K  EA  +  K+KN   TN
Sbjct: 485 GEISKAEDLLQEMIDKGIEPDELTFSEVNIADEELSVKIRKENEAPVVERKVKNISDTN 543



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/444 (22%), Positives = 201/444 (45%), Gaps = 23/444 (5%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           + Y  ++  L  + R +    ++      G +PD   ++ +I ++ + GN+ +A+D +  
Sbjct: 1   MAYNMVMDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIQSYCKMGNLIKAVDHYEA 60

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M   G+       + L++ +   G   E +    L  ++  +  +   YN+ +  +C   
Sbjct: 61  MVSHGIETNCHIVSYLLQCFRKLGMTSEVIAYF-LKFKDSGLHLDKVIYNIAMDTYCKNG 119

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           N+ EA  ++++M   G+ PD + Y  +   Y   GE   A++V  EM    ++P+  T  
Sbjct: 120 NMNEAVKLLNEMKCGGLTPDKIHYTCLINGYCLKGEMQNAQQVFEEMLKANIEPDIVTYN 179

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           I+ SG+CK G + E       M + G+ PN + + + I GF    +    + +  +++E 
Sbjct: 180 ILASGFCKSGLVMEVFDLLDRMADQGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEK 239

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            ++   + YS+++  +  +G+ D    +F  + + G   D  + S L     R    + A
Sbjct: 240 GIDHIEVMYSSMVCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGA 299

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +   M+E    P+V+ ++ +IS +C +G MD+A   F  M + G+S ++  +  LM G
Sbjct: 300 SNVCKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNG 359

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLL----------------AEARRATGLTKE 511
           Y +A +   A ++   M   G+ P    + +L                A+ RR+  L   
Sbjct: 360 YCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRAN 419

Query: 512 AKRILSKIKNKERTNEMEAEEDIP 535
             ++LS +K      +M+ E D+P
Sbjct: 420 HNKLLSSMK------DMQIEPDVP 437



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/226 (21%), Positives = 100/226 (44%), Gaps = 20/226 (8%)

Query: 60  CSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           C   +       V S +KL++   + G   +A   F+++++ G    ++ YT L+     
Sbjct: 303 CKIMLEHNVVPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSIDVIVYTILMNGYCK 362

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
             R      +  Q+   G+ PD I +  +++     G+++E +   W+    G+     +
Sbjct: 363 AGRLQEACQLFVQMTNLGIKPDVIAYTVLLD-----GHLKETLQQGWE----GIAKERRS 413

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           +  L++            KLL  M ++  ++P++  Y VL+   C  + + EA  +  +M
Sbjct: 414 F--LLRA--------NHNKLLSSM-KDMQIEPDVPCYTVLIDGKCKAEYLVEARELFDEM 462

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
              G+ PD   Y  +   Y   GE  +AE+++ EM   G++P+  T
Sbjct: 463 LQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELT 508


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 231/452 (51%), Gaps = 13/452 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAA---LTIQKRFNSIHSIM 130
           S   ++++L++R   QEA+ +  ++   G  P+  TY  L+     L + K    +  IM
Sbjct: 250 SYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIM 309

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           ++   N + P    +N ++N F   G ++EA     +M++  + P   TYNTLI G    
Sbjct: 310 TR---NNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQW 366

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
               E   L++ M ++G VK N  TYN++++  C + N+TEA   + KM  +G+ PD VT
Sbjct: 367 RDSSEVYSLIEEMDKKG-VKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVT 425

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+  AY + G+  +A  ++ EM   G++ +  T   I+   C E K+ EA     +  
Sbjct: 426 YNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSAS 485

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAG 367
           + G   + V + +LI G+ +  D  G D  L L   MKE ++ P  ITY++++     + 
Sbjct: 486 KRGYILDEVSYGILILGYFK--DEKG-DRALNLWDEMKERQIMPSTITYNSVIGGLCQSR 542

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +D+  +  ++M + G+ PD   Y+I+  G+  E   EKA +    MIE+ F P+V    
Sbjct: 543 KVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCN 602

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            ++ G C +G +++A+++F+ +   G   ++ T+ T++    +  +   A ++L  M+A 
Sbjct: 603 ILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAK 662

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + P + T+ ++  A    G  KEA+    K+
Sbjct: 663 KLGPDQYTYKVIIAALTDAGRIKEAEEFTLKM 694



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/469 (25%), Positives = 219/469 (46%), Gaps = 53/469 (11%)

Query: 37  NNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQE---AQA 93
           + P    Q+++  K  + +P        N  +C T      LMNSL+          A+ 
Sbjct: 154 DQPHLATQIFNKMKRLNYRP--------NLLTCNT------LMNSLVRYPSSSSILLARQ 199

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +  + I+ G  P+  ++  L+    ++ +       ++++ E G  PD++ +N +++A  
Sbjct: 200 VLKDSIKLGVVPNTNSFNILIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALL 259

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           +   ++EA D    MK  GL+P   TYN L+ GY   G  +E+ K++++M+R  N+ P +
Sbjct: 260 KRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTR-NNLLPTV 318

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            TYN+LV  +CN+  I EA+ +  +M    + PDVVTYNT+    +Q  ++ +   +I E
Sbjct: 319 WTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEE 378

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M+  GV+ N  T  II+   CK+G + EA      M+E G+ P+ V +N LI  + +   
Sbjct: 379 MDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGK 438

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
                 ++  M    +  D  T +TI++       +D+   +     K G   D  +Y I
Sbjct: 439 MGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGI 498

Query: 394 LAKGYVREQEPEKAEEL-----------------------------------LMTMIESG 418
           L  GY ++++ ++A  L                                   L  M+E+G
Sbjct: 499 LILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENG 558

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             P+   +  II G+C +G++++A +  ++M E+   P++ T   L+ G
Sbjct: 559 LVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRG 607



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 214/462 (46%), Gaps = 34/462 (7%)

Query: 41  EKKQLYSNSKPTDSQPQTH------CSFC---MNKESCRTVRSMTKLMNSLIERGKPQEA 91
           E + L  + K     P  H      C +C   + KE+ + +  MT+              
Sbjct: 266 EARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTR-------------- 311

Query: 92  QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINA 151
               NNL+     P++ TY  L+       + +    I  ++E+  + PD + +N +I+ 
Sbjct: 312 ----NNLL-----PTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDG 362

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP 211
            S+  +  E      +M + G+     TYN ++K     G   E+   LD M   G + P
Sbjct: 363 CSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENG-LSP 421

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           +  TYN L+ A+C    + +A+ +M +M + G+K D  T NTI        + D+A  ++
Sbjct: 422 DCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLL 481

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
                 G   +  + GI+I GY K+ K   AL     MKE  + P+ + +N +I G  + 
Sbjct: 482 CSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQS 541

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
              D   + L  M E  + PD  TY+ I++ +   G ++K  +  ++M +   KPD +  
Sbjct: 542 RKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTC 601

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           +IL +G  RE   EKA +L  T++  G   +VV + TIIS  C +G  + A ++  +M  
Sbjct: 602 NILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEA 661

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEI-LQIMKAFGVHPQ 492
             + P+  T++ ++   ++A +   AEE  L+++++  VH Q
Sbjct: 662 KKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESGIVHDQ 703



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 217/453 (47%), Gaps = 68/453 (15%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           + + ++  +P  A  IFN +    ++P+L+T  TL+ +L    R+ S  SI+   +   +
Sbjct: 147 IGAYVQMDQPHLATQIFNKMKRLNYRPNLLTCNTLMNSLV---RYPSSSSILLARQ---V 200

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
             DSI                          + G+ P T+++N LI GY +  K ++++ 
Sbjct: 201 LKDSI--------------------------KLGVVPNTNSFNILIYGYCLESKVKDALD 234

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
            ++ MS  G V P+  +YN ++ A    + + EA +++  M + G+ P+  TYN +   Y
Sbjct: 235 WVNKMSEFGCV-PDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGY 293

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
            + G   +A +VI  M  N + P   T  ++++G+C +GKI EA R    M++  V P++
Sbjct: 294 CRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDV 353

Query: 319 VIFNLLIKG------------FVEIMDRDGVD-----------------------EVLAL 343
           V +N LI G             +E MD+ GV                          L  
Sbjct: 354 VTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDK 413

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M+E  ++PD +TY+T++ A+  AG M K   + D+M   G+K D    + +      E++
Sbjct: 414 MEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKK 473

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            ++A  LL +  + G+  + V +  +I G+  D   DRA+ ++D+M E  + P+  T+ +
Sbjct: 474 LDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNS 533

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           ++ G  ++R+  +A + L  M   G+ P ++T+
Sbjct: 534 VIGGLCQSRKVDQAIDKLNEMLENGLVPDETTY 566



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 178/362 (49%), Gaps = 14/362 (3%)

Query: 112 TLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES 171
           +LL +     R + +H ++     +  +P     +  I A+ +      A   F KMK  
Sbjct: 110 SLLISFISSDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRL 169

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK----PNLRTYNVLVRAWCNEK 227
              P   T NTL+    +   P  S  LL     + ++K    PN  ++N+L+  +C E 
Sbjct: 170 NYRPNLLTCNTLMNS--LVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLES 227

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
            + +A + ++KM+  G  PD V+YNTI  A  +     +A +++++M+  G+ PN  T  
Sbjct: 228 KVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYN 287

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLAL--- 343
           +++ GYC+ G +KEA +    M    + P +  +N+L+ GF      DG +DE   +   
Sbjct: 288 MLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFC----NDGKIDEAFRIRDE 343

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M++  V PDV+TY+T+++  S      +   + ++M K G+K +A  Y+I+ K   ++  
Sbjct: 344 MEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGN 403

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
             +A   L  M E+G  P+ V + T+I  +C  G M +A  + D+M   G+  +  T  T
Sbjct: 404 MTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNT 463

Query: 464 LM 465
           ++
Sbjct: 464 IL 465



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 134/292 (45%), Gaps = 38/292 (13%)

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATA---YAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           A  + +KM     +P+++T NT+  +   Y  +     A +V+ +    GV PN  +  I
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNI 218

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +I GYC E K+K+AL +   M E+G  P                                
Sbjct: 219 LIYGYCLESKVKDALDWVNKMSEFGCVP-------------------------------- 246

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
              D ++Y+TI++A      + + +++  DM   G+ P+ H Y++L  GY R    ++A 
Sbjct: 247 ---DTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEAT 303

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           +++  M  +   P V  +  +++G+C+DG +D A  + D+M +  V P++ T+ TL+ G 
Sbjct: 304 KVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGC 363

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           S+ R       +++ M   GV     T+ ++ +     G   EA   L K++
Sbjct: 364 SQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKME 415



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 125/267 (46%), Gaps = 24/267 (8%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K   A  +++ + E    PS +TY +++  L   ++ +     ++++ ENG+ PD   +N
Sbjct: 508 KGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYN 567

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I+ F   GN+E+A     +M E+   P   T N L++G    G  E+++KL + +  +
Sbjct: 568 IIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSK 627

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G    ++ TYN ++ + C E     A++++ +M A  + PD  TY  I  A    G   +
Sbjct: 628 GK-DIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKE 686

Query: 267 AEEVIVEMEHNGVQPN-----GRTCGII------------------ISGYCKEGKIKEAL 303
           AEE  ++M  +G+  +     G+   ++                  I+  C + K K+A+
Sbjct: 687 AEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQHKYKDAM 746

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVE 330
                + + GV  N   +  L++G ++
Sbjct: 747 HLFVEVTKEGVALNKYTYLNLMEGLIK 773


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 197/414 (47%), Gaps = 4/414 (0%)

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
           H+PS  +   LLA L   KR +             + PD   FN VI+     G + +A 
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGY---GIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           D    +K  GL P+ +TYN+LI GY   G AG       LL  M  E  + P   T+ VL
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV-EAGISPTAVTFGVL 270

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +  +C   N   A  V  +M   G+   VVTYN++ +     G+ ++  +++ EME  G+
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            PN  T G ++ G+CK+G + +A  +   M E  V P++VI+ +LI G+  +   +    
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMA 390

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           V   M +  ++P+V TY+ ++  +S +G       + D+M + GI+ D   Y++L     
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
            + E  KA +LL  M E G  PN + + TII G+C  G++  A E+  +M +     N+ 
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVV 510

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           T+   +  + +  +   A ++L  M    + P   T+  + E     G T + +
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIR 564



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 183/393 (46%), Gaps = 13/393 (3%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESG--LTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           +  + ++ A + +     A D F    ES     P+TS+ N L+ G   A + + + K  
Sbjct: 120 LIADMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAF 179

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
               R   V P++ T+N ++   C    + +A +V   + A G+ P V TYN++   Y +
Sbjct: 180 RSALRR-RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCK 238

Query: 261 NGEAD---QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            G A      + ++ EM   G+ P   T G++I+GYCK      A+R    MK+ G+  +
Sbjct: 239 KGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
           +V +N LI G         V+E + LM+E     ++P+ IT+  ++  +   G M    +
Sbjct: 299 VVTYNSLISGLCS---EGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADAND 355

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
             D M +  ++PD   Y+IL  GY R  + E A  +   M + G  PNV  +  +I+G+ 
Sbjct: 356 WIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFS 415

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G    A  + D+M E G+  ++ T+  L+       +  +A ++L  M   G+ P   
Sbjct: 416 RSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHL 475

Query: 495 TFLLLAEARRATGLTKEAKRILSKI-KNKERTN 526
           T+  + +     G  K A  I +++ K ++R N
Sbjct: 476 TYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRAN 508



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 148/291 (50%), Gaps = 1/291 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   +      A  +F  + + G   S+VTY +L++ L  + +      +M ++E+ G
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ I F  V+  F + G M +A D    M E  + P    Y  LI GY   GK E+++
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAM 389

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            + + M+++G + PN+ TYN L+  +    +   A  ++ +M   G++ DVVTYN +  A
Sbjct: 390 AVKEAMAKKG-ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               GE  +A +++ EM   G++PN  T   II G+C +G IK A      M++     N
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRAN 508

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           +V +N+ IK F +I   D  +++L  M +  + P+ ITY TI       G+
Sbjct: 509 VVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGY 559



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 182/369 (49%), Gaps = 4/369 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI-- 129
           + +   +++ L   G+ ++A  +  ++   G  PS+ TY +L+     +    +++ +  
Sbjct: 191 IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM 250

Query: 130 -MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
            + ++ E G+ P ++ F  +IN + ++ N   A+  F +MK+ G+  +  TYN+LI G  
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLC 310

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             GK EE VKL++ M   G + PN  T+  +++ +C +  + +A + +  M    ++PDV
Sbjct: 311 SEGKVEEGVKLMEEMEDLG-LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDV 369

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           V Y  +   Y + G+ + A  V   M   G+ PN  T   +I+G+ + G  + A      
Sbjct: 370 VIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDE 429

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           MKE G+  ++V +N+LI       +     ++L  M E  + P+ +TY+TI+  +   G 
Sbjct: 430 MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGN 489

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +    EI   M K   + +   Y++  K + +  + ++A +LL  M++    PN + + T
Sbjct: 490 IKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYET 549

Query: 429 IISGWCSDG 437
           I  G    G
Sbjct: 550 IKEGMMEKG 558



 Score =  142 bits (357), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 80/351 (22%), Positives = 172/351 (49%), Gaps = 24/351 (6%)

Query: 80  NSLIE-------RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           NSLI+        G       +   ++E G  P+ VT+  L+          +   +  +
Sbjct: 230 NSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEE 289

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +++ G+    + +N++I+     G +EE +    +M++ GL+P   T+  ++KG+   G 
Sbjct: 290 MKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGM 349

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             ++   +D M+ E NV+P++  Y +L+  +     + +A  V   MA  G+ P+V TYN
Sbjct: 350 MADANDWIDGMT-ERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYN 408

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            + T ++++G+   A  ++ EM+  G++ +  T  ++I   C +G++++A++    M E 
Sbjct: 409 CLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEV 468

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ PN + +N +I+GF +  +     E+   M++ R   +V+TY+  +  +   G MD+ 
Sbjct: 469 GLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEA 528

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
            ++ ++M    + P+   Y  + +G                M+E G+ P++
Sbjct: 529 NDLLNEMLDKCLVPNGITYETIKEG----------------MMEKGYTPDI 563



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 130/260 (50%), Gaps = 1/260 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   L++ L   GK +E   +   + + G  P+ +T+  +L     +      +  +
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWI 357

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + E  ++PD + +  +I+ +   G ME+AM     M + G++P  +TYN LI G+  +
Sbjct: 358 DGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRS 417

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    +  LLD M  +G ++ ++ TYNVL+ A C +  + +A  ++ +M+  G++P+ +T
Sbjct: 418 GDWRSASGLLDEMKEKG-IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNTI   +   G    A E+   ME    + N  T  + I  +C+ GK+ EA      M 
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536

Query: 311 EYGVHPNLVIFNLLIKGFVE 330
           +  + PN + +  + +G +E
Sbjct: 537 DKCLVPNGITYETIKEGMME 556


>gi|77552391|gb|ABA95188.1| salt-inducible protein, putative [Oryza sativa Japonica Group]
          Length = 938

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 195/370 (52%), Gaps = 17/370 (4%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++    +G+ Q AQ +F  +++   +P +VTY  L +          +  ++ ++ +
Sbjct: 556 TCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMAD 615

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++P+S+ +   I  F   GN+ EA   F  ++E G+      Y++++ GY ++G  + 
Sbjct: 616 QGLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDH 675

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  L   ++R+GN+  +    + L+   C   N+  A NV   M    + PDV++Y+ + 
Sbjct: 676 AYMLFVRVARQGNLVDHFSC-SKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLI 734

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           + Y QNG+ D+A     +M   G+  +     I+++GYCK G+++EA +    M   G+ 
Sbjct: 735 SIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIK 794

Query: 316 PNLVIFNLLIKGFVE----------------IMDRDGVDEVLALMKEFRVNPDVITYSTI 359
           P+++ + +L+ G ++                 + R   +++L+ MK+ ++ PDV  Y+ +
Sbjct: 795 PDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQIEPDVPCYTVL 854

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++    A ++ + +E+FD+M + G+ PDA+AY+ L  GY  + E  KAE+LL  MI+ G 
Sbjct: 855 IDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGI 914

Query: 420 HPNVVIFTTI 429
            P+ + F+ +
Sbjct: 915 EPDELTFSVL 924



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 213/444 (47%), Gaps = 17/444 (3%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           ++ L+    + G   EA A F    + G     V Y   +         N    ++++++
Sbjct: 485 VSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMK 544

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G+ PD I +  +I+ +   G M+ A   F +M ++ + P   TYN L  G+  +G   
Sbjct: 545 YGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVM 604

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           E   LLD M+ +G ++PN  TY + +  +C   N++EA  + + +   G+    V Y+++
Sbjct: 605 EVFDLLDRMADQG-LEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSM 663

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              Y  +G  D A  + V +   G   +  +C  +I+  C+ G ++ A    + M E+ V
Sbjct: 664 VCGYLLSGWTDHAYMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDV 723

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P+++ ++ LI  + +  D D        M +  ++ DVI Y+ +MN +  AG + +  +
Sbjct: 724 VPDVISYSKLISIYCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQ 783

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE----------------ELLMTMIESG 418
           +F  M   GIKPD  AY++L  G+++E   +  E                +LL +M +  
Sbjct: 784 LFVQMTNLGIKPDVIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMKDMQ 843

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P+V  +T +I G C    +  A E+FD+M + G++P+   +  L+ GY    +  +AE
Sbjct: 844 IEPDVPCYTVLIDGKCKAEYLVEARELFDEMLQKGLTPDAYAYTALINGYCSQGEISKAE 903

Query: 479 EILQIMKAFGVHPQKSTFLLLAEA 502
           ++LQ M   G+ P + TF +L ++
Sbjct: 904 DLLQEMIDKGIEPDELTFSVLNQS 927



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/483 (21%), Positives = 214/483 (44%), Gaps = 23/483 (4%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R  +  +  L + GK   A  I   +         + Y  ++  L  + R +    ++  
Sbjct: 378 RGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMVMDGLCKEMRLDEAEKLLEN 437

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
               G +PD   ++ +I ++ + GN+  A+D +  M   G+       + L++ +   G 
Sbjct: 438 KARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGIETNCHIVSYLLQCFRKLGM 497

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             E++    L  ++  +  +   YN+ +  +C   N+ EA  ++++M   G+ PD + Y 
Sbjct: 498 TSEAIAYF-LKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVKLLNEMKYGGLTPDKIHYT 556

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            + + Y   GE   A++V  EM    ++P+  T  I+ SG+CK G + E       M + 
Sbjct: 557 CLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFCKSGLVMEVFDLLDRMADQ 616

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ PN + + + I GF    +    + +  +++E  ++   + YS+++  +  +G+ D  
Sbjct: 617 GLEPNSLTYGIAIVGFCRGGNLSEAEVLFNVVEEKGIDHIEVMYSSMVCGYLLSGWTDHA 676

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             +F  + + G   D  + S L     R    + A  +   M+E    P+V+ ++ +IS 
Sbjct: 677 YMLFVRVARQGNLVDHFSCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISI 736

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C +G MD+A   F  M + G+S ++  +  LM GY +A +   A ++   M   G+ P 
Sbjct: 737 YCQNGDMDKAHLWFHDMVQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPD 796

Query: 493 KSTFLLL----------------AEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPV 536
              + +L                A+ RR+  L     ++LS +K      +M+ E D+P 
Sbjct: 797 VIAYTVLLDGHLKETLQQGWEGIAKERRSFLLRANHNKLLSSMK------DMQIEPDVPC 850

Query: 537 ESL 539
            ++
Sbjct: 851 YTV 853



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/438 (20%), Positives = 194/438 (44%), Gaps = 20/438 (4%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           +P  A A F +    G      TY+ ++  L+  ++   + S+               F+
Sbjct: 197 RPAIAFAYFKDTQSIGFNHDFSTYSEMIQILSHSRQGKMLVSL---------------FS 241

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY--NTLIKGYGIAGKPEESVKLLDLMS 204
            ++++ + SG   E +      + +  TP + ++  + LIK        + ++ L   + 
Sbjct: 242 ELVSSSNASG--PEILPLVDHHRRTCATPCSLSFMVDCLIKACITCYDVQATICLFSGIC 299

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G V P++ T+N+L++               ++M    + PDV T+  +  +  Q  + 
Sbjct: 300 RLG-VVPSVWTWNLLLKFIAETGEYEMVLAAYNEMKCFQLTPDVYTFAIVTRSLFQAKKV 358

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           D+A +V  EM   GV+P+ R     + G C  GK   A    + +    V    + +N++
Sbjct: 359 DEALQVWAEMTEMGVKPDARGYSSFLIGLCDCGKYDLAYVILQEINREKVPVEAMAYNMV 418

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           + G  + M  D  +++L        NPDV  YS ++ ++   G +    + ++ M   GI
Sbjct: 419 MDGLCKEMRLDEAEKLLENKARQGSNPDVYGYSYLIRSYCKMGNLINAVDHYEAMVSHGI 478

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           + + H  S L + + +     +A    +   +SG H + VI+   +  +C +G+M+ A++
Sbjct: 479 ETNCHIVSYLLQCFRKLGMTSEAIAYFLKFKDSGLHLDKVIYNIAMDTYCKNGNMNEAVK 538

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + ++M   G++P+   +  L+ GY    +   A+++ + M    + P   T+ +LA    
Sbjct: 539 LLNEMKYGGLTPDKIHYTCLISGYCLKGEMQNAQQVFEEMLKANIEPDIVTYNILASGFC 598

Query: 505 ATGLTKEAKRILSKIKNK 522
            +GL  E   +L ++ ++
Sbjct: 599 KSGLVMEVFDLLDRMADQ 616



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 58/243 (23%), Positives = 111/243 (45%), Gaps = 17/243 (6%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S +KL+N L   G  Q A  +   ++E    P +++Y+ L++        +  H     +
Sbjct: 694 SCSKLINDLCRVGNVQGASNVCKIMLEHDVVPDVISYSKLISIYCQNGDMDKAHLWFHDM 753

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY------ 187
            + G+  D I +  ++N + ++G ++EA   F +M   G+ P    Y  L+ G+      
Sbjct: 754 VQRGLSVDVIVYTILMNGYCKAGRLQEACQLFVQMTNLGIKPDVIAYTVLLDGHLKETLQ 813

Query: 188 ----GIAGKPEESV------KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
               GIA +    +      KLL  M ++  ++P++  Y VL+   C  + + EA  +  
Sbjct: 814 QGWEGIAKERRSFLLRANHNKLLSSM-KDMQIEPDVPCYTVLIDGKCKAEYLVEARELFD 872

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           +M   G+ PD   Y  +   Y   GE  +AE+++ EM   G++P+  T  ++     +  
Sbjct: 873 EMLQKGLTPDAYAYTALINGYCSQGEISKAEDLLQEMIDKGIEPDELTFSVLNQSSLRSR 932

Query: 298 KIK 300
           KI+
Sbjct: 933 KIQ 935


>gi|15224262|ref|NP_179484.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75099137|sp|O64624.1|PP163_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g18940
 gi|3004555|gb|AAC09028.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|15983785|gb|AAL10489.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
 gi|38564280|gb|AAR23719.1| At2g18940/F19F24.14 [Arabidopsis thaliana]
 gi|330251736|gb|AEC06830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 130/524 (24%), Positives = 231/524 (44%), Gaps = 79/524 (15%)

Query: 68  SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           +C TV      +++    G  +EA+  F  L   G++P  VTY  LL        +    
Sbjct: 283 TCSTV------LSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEAL 336

Query: 128 SIMSQVEEN-----------------------------------GMDPDSIFFNAVINAF 152
           S++ ++EEN                                   G+ P++I +  VI+A+
Sbjct: 337 SVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAY 396

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
            ++G  +EA+  F+ MKE+G  P T TYN ++   G   +  E +K+L  M   G   PN
Sbjct: 397 GKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNG-CSPN 455

Query: 213 LRTYNVLVRAWCNEKNITEAWN-VMHKMAASGMKPDVVTYNTIATAY------------- 258
             T+N ++ A C  K + +  N V  +M + G +PD  T+NT+ +AY             
Sbjct: 456 RATWNTML-ALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMY 514

Query: 259 ----------------------AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
                                 A+ G+    E VI +M+  G +P   +  +++  Y K 
Sbjct: 515 GEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKG 574

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
           G      R    +KE  + P+ ++   L+    +     G +    L K+    PD++ +
Sbjct: 575 GNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIF 634

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           +++++ ++     D+ + I + + + G+ PD   Y+ L   YVR  E  KAEE+L T+ +
Sbjct: 635 NSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEK 694

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
           S   P++V + T+I G+C  G M  A+ +  +M E G+ P + T+ T + GY+       
Sbjct: 695 SQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAE 754

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            E++++ M      P + TF ++ +     G   EA   +SKIK
Sbjct: 755 IEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 798



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 121/522 (23%), Positives = 236/522 (45%), Gaps = 72/522 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTY--------------------- 110
           VR+ T ++++    GK ++A  +F  + E G  P+LVTY                     
Sbjct: 210 VRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVL 269

Query: 111 ---------------TTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSES 155
                          +T+L+A   +          ++++  G +P ++ +NA++  F ++
Sbjct: 270 DEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKA 329

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
           G   EA+    +M+E+     + TYN L+  Y  AG  +E+  ++++M+++G V PN  T
Sbjct: 330 GVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKG-VMPNAIT 388

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           Y  ++ A+       EA  + + M  +G  P+  TYN + +   +   +++  +++ +M+
Sbjct: 389 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMK 448

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
            NG  PN  T   +++    +G  K   R  R MK  G  P+   FN LI  +       
Sbjct: 449 SNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV 508

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
              ++   M     N  V TY+ ++NA +  G     + +  DM   G KP   +YS++ 
Sbjct: 509 DASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 568

Query: 396 KGYVR-------EQEPEKAEE--------LLMTMI--------------------ESGFH 420
           + Y +       E+   + +E        LL T++                    + G+ 
Sbjct: 569 QCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYK 628

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P++VIF +++S +  +   D+A  + + + E G+SP+L T+ +LM  Y    + W+AEEI
Sbjct: 629 PDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEI 688

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           L+ ++   + P   ++  + +     GL +EA R+LS++  +
Sbjct: 689 LKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTER 730



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 215/462 (46%), Gaps = 18/462 (3%)

Query: 43  KQLYSNSKPTDSQP-----QTHCSFCMNKESCRTVRSMTK------------LMNSLIER 85
           K++  NS P DS         +     +KE+   +  MTK            ++++  + 
Sbjct: 340 KEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKA 399

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  EA  +F ++ E G  P+  TY  +L+ L  + R N +  ++  ++ NG  P+   +
Sbjct: 400 GKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATW 459

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++      G  +     F +MK  G  P   T+NTLI  YG  G   ++ K+   M+R
Sbjct: 460 NTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTR 519

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G     + TYN L+ A   + +     NV+  M + G KP   +Y+ +   YA+ G   
Sbjct: 520 AG-FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYL 578

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
             E +   ++   + P+      ++    K   +  + R     K++G  P++VIFN ++
Sbjct: 579 GIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSML 638

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
             F      D  + +L  ++E  ++PD++TY+++M+ +   G   K +EI   + K+ +K
Sbjct: 639 SIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQLK 698

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD  +Y+ + KG+ R    ++A  +L  M E G  P +  + T +SG+ + G      +V
Sbjct: 699 PDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDV 758

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            + M ++   PN  TF+ ++ GY  A +   A + +  +K F
Sbjct: 759 IECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTF 800



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 111/477 (23%), Positives = 198/477 (41%), Gaps = 40/477 (8%)

Query: 55  QPQTHCSFCMNKESCRTVRS-MTKLMNSLIERGKPQEAQAIFNNLI----EGGHKPSLVT 109
           QP T  S   +      +R+ +  L+  L + G  + A  +F  L+     G  K     
Sbjct: 118 QPLTGLSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHQV 177

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK 169
               +  L  + +++    ++ ++       D   +  +++A+S +G  E+A+D F +MK
Sbjct: 178 IEIFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMK 237

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKP-EESVKLLDLM-------------------SREGNV 209
           E G +PT  TYN ++  +G  G+   + + +LD M                   +REG +
Sbjct: 238 EMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLL 297

Query: 210 K---------------PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           +               P   TYN L++ +      TEA +V+ +M  +    D VTYN +
Sbjct: 298 REAKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNEL 357

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             AY + G + +A  VI  M   GV PN  T   +I  Y K GK  EAL+   +MKE G 
Sbjct: 358 VAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGC 417

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            PN   +N ++    +    + + ++L  MK    +P+  T++T++      G       
Sbjct: 418 VPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNR 477

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +F +M   G +PD   ++ L   Y R      A ++   M  +GF+  V  +  +++   
Sbjct: 478 VFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALA 537

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             G       V   M   G  P   ++  ++  Y++       E I   +K   + P
Sbjct: 538 RKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFP 594


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 215/437 (49%), Gaps = 1/437 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A  +F ++ E    PS+V ++ LL A+    ++ ++ S+   +E  G+  D   F 
Sbjct: 59  KFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLYSFT 118

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I+ F     +  A+    KM + G  P+  T+ +L+ G+    +  E++ L+D +   
Sbjct: 119 TLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQIVGL 178

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +PN+  YN ++ + C +  +  A +V+  M   G++PDVVTYN++ T    +G    
Sbjct: 179 G-YEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTWGV 237

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           +  ++ +M   G+ P+  T   +I  Y KEG++ EA +    M +  V+PN+V +N LI 
Sbjct: 238 SARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSLIN 297

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           G       D   +VL ++      P+ +TY+T++N +  A  +D   +I   M + G+  
Sbjct: 298 GLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGVDG 357

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   Y+ L +GY +  +   AE++L  M+  G HP++  F  ++ G C  G + +A+   
Sbjct: 358 DTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALVRL 417

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           + + +      + T+  ++ G  +A +   A  +   +   GV P   T++ +    R  
Sbjct: 418 EDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLRRK 477

Query: 507 GLTKEAKRILSKIKNKE 523
            L +EA  +  K++ ++
Sbjct: 478 RLWREAHELYRKMQKED 494



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 150/340 (44%), Gaps = 37/340 (10%)

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           Y   +R+  +     +A  +   MA S   P +V ++ +  A A+  + +    +   +E
Sbjct: 47  YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR- 334
             G+  +  +   +I  +C+  ++  AL     M + G  P++V F  L+ GF  + +R 
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHV-NRF 165

Query: 335 ----DGVDEVLAL-------------------------------MKEFRVNPDVITYSTI 359
                 VD+++ L                               MK+  + PDV+TY+++
Sbjct: 166 YEAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSL 225

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +     +G       I  DM + GI PD   +S L   Y +E +  +A++    MI+   
Sbjct: 226 ITRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSV 285

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
           +PN+V + ++I+G C  G +D A +V + +   G  PN  T+ TL+ GY +A++     +
Sbjct: 286 NPNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMK 345

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           IL +M   GV     T+  L +     G    A+++L ++
Sbjct: 346 ILCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRM 385


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 186/377 (49%), Gaps = 2/377 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L + G+   A   + ++ +    PS++TYT L+ AL    R +    I+  + E G
Sbjct: 74  IIKGLCDNGRVDSALVHYRDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAG 132

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + +N +IN F + GNM+EA+  F +M E+  +P   TYN LI GY    +P++  
Sbjct: 133 CAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGA 192

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL  M + G  +PN  TYN L+ +        +A+N+   M     KP   T+N +   
Sbjct: 193 KLLQEMVKYG-CEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDM 251

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G+ D A E+   M   G  P+  T  I+ISG C+  +I +A +    M E G  P+
Sbjct: 252 FCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPD 311

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N ++ G  +    D   EV  +++      DV+T ST+++    +  +D  +++  
Sbjct: 312 VVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLR 371

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M + G  PD  AY+IL  G+ +  + +K+      M++ G  P V+ ++ +I   C   
Sbjct: 372 EMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSA 431

Query: 438 SMDRAIEVFDKMCEHGV 454
            +     +   M E GV
Sbjct: 432 RVRDGCMLLKTMLERGV 448



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/424 (24%), Positives = 205/424 (48%), Gaps = 2/424 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++ + + K QEA  +F N + G   P  +TY+TL+      + F   + ++ ++E+ G
Sbjct: 4   LLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEKRG 63

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P +  +N +I    ++G ++ A+  +  M+     P+  TY  L+     + +  ++ 
Sbjct: 64  IVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQRH-CAPSVITYTILVDALCKSARISDAS 122

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L+ M  E    PN+ TYN L+  +C   N+ EA  + ++M  +   PDV TYN +   
Sbjct: 123 LILEDMI-EAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILIDG 181

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y +        +++ EM   G +PN  T   ++    K GK  +A   A+ M      P+
Sbjct: 182 YCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCKPS 241

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              FNL+I  F ++   D   E+  LM +    PD+ TY+ +++    A  +D  +++ +
Sbjct: 242 HFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLE 301

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M +AG  PD   Y+ +  G  +  + ++A E+   +   G+  +VV  +T+I G C   
Sbjct: 302 RMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSR 361

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D A ++  +M  +G +P++  +  L+ G+ +A Q  ++      M   G  P   T+ 
Sbjct: 362 RLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYS 421

Query: 498 LLAE 501
           ++ +
Sbjct: 422 IVID 425



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 182/390 (46%), Gaps = 39/390 (10%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +++AF      +EA D F        +P + TY+TLI G+  A   +++ +LLD M +
Sbjct: 2   NCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEMEK 61

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G V P+   YN +++  C+   +  A  V ++       P V+TY  +  A  ++    
Sbjct: 62  RGIV-PHNAVYNTIIKGLCDNGRVDSAL-VHYRDMQRHCAPSVITYTILVDALCKSARIS 119

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A  ++ +M   G  PN  T   +I+G+CK G + EA+     M E    P++  +N+LI
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179

Query: 326 KGFV-EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA---------------------- 362
            G+  +   +DG  ++L  M ++   P+ ITY+T+M++                      
Sbjct: 180 DGYCKQERPQDGA-KLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDC 238

Query: 363 -------------WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
                        +   G +D   E+F  M   G  PD + Y+I+  G  R    + A +
Sbjct: 239 KPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQ 298

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           LL  M E+G  P+VV + +I+SG C    +D A EV++ +   G   ++ T  TL+ G  
Sbjct: 299 LLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLC 358

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           ++R+   AE++L+ M+  G  P    + +L
Sbjct: 359 KSRRLDDAEKLLREMERNGSAPDVVAYTIL 388



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 164/355 (46%), Gaps = 1/355 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M +    +V + T L+++L +  +  +A  I  ++IE G  P++VTY TL+         
Sbjct: 94  MQRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNM 153

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    + +Q+ EN   PD   +N +I+ + +    ++      +M + G  P   TYNTL
Sbjct: 154 DEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTL 213

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           +     +GK  ++  L  +M R  + KP+  T+N+++  +C    +  A+ +   M   G
Sbjct: 214 MDSLVKSGKYIDAFNLAQMMLRR-DCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRG 272

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             PD+ TYN + +   +    D A +++  M   G  P+  T   I+SG CK  ++ EA 
Sbjct: 273 CLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAY 332

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                ++  G   ++V  + LI G  +    D  +++L  M+     PDV+ Y+ +++ +
Sbjct: 333 EVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGF 392

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
             A  +DK    F +M   G  P    YSI+     +         LL TM+E G
Sbjct: 393 CKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERG 447


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 232/487 (47%), Gaps = 36/487 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           VR+  +++  L ++    E + +++ +I+   +P++VT+ T++ +   +        ++ 
Sbjct: 172 VRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLD 231

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G DP+ + +N ++N  S  G  + A +   +M   GL  +  TYN LI+G+    
Sbjct: 232 VMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKE 291

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             EE+  L   M   G + P + TYN ++ + C    +++A   +  M    + PD+V+Y
Sbjct: 292 MFEEANDLRREMLGRGAL-PTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSY 350

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   Y++ G   +A  +  E+    + P+  T   +I G C+ G +  A      M +
Sbjct: 351 NTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIK 410

Query: 312 YGVHPNLVIFNLLIKGFVEI----MDRDGVDEVLA-------------LMKEFRVN---- 350
           +G+ P++V F +L++GF ++    M ++  DE+L+             ++ E ++     
Sbjct: 411 HGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSK 470

Query: 351 --------------PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
                         PD+ITY+ ++N     G  D   E+   M   GI PD   Y+ +  
Sbjct: 471 AFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIH 530

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
            ++      KAEE+   M++ G HP+VV +T +I  +   G +D A + FD+M + GVSP
Sbjct: 531 AHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSP 590

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N+ T+  L++G  +      A  +   M++ GV P K T+ +L          ++A ++ 
Sbjct: 591 NVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLY 650

Query: 517 SKIKNKE 523
             + ++E
Sbjct: 651 KDMLDRE 657



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 219/452 (48%), Gaps = 1/452 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V+ +  L+    ++   ++   +F  ++  G  P +     +L  L  +   N +  + 
Sbjct: 136 SVKLLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVY 195

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S + +  + P  + FN ++++  + G +  A++    M+  G  P   +YN L+ G    
Sbjct: 196 SVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGK 255

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ + + +L++ MS  G +K +  TYN L+R +C ++   EA ++  +M   G  P VVT
Sbjct: 256 GEFDRAKELIEQMSMLG-LKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVT 314

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNTI  +  + G    A   +  M +  + P+  +   +I GY + G   EAL     ++
Sbjct: 315 YNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELR 374

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              + P++V +N LI G     + D    +   M +  + PDV+T++ ++  +   G + 
Sbjct: 375 SKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLP 434

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             KE+FD+M   G+KPD  AY+    G ++   P KA  +   M   GF P+++ +  +I
Sbjct: 435 MAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLI 494

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G C  G+ D A E+  KM   G+ P+  T+ +++  +  +    +AEE+   M   G+H
Sbjct: 495 NGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIH 554

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+ +L  +    G    AK+   ++++K
Sbjct: 555 PSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDK 586



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 188/405 (46%), Gaps = 20/405 (4%)

Query: 54  SQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTL 113
           S  + +    +N++    + S   L+      G   EA  +F+ L      PS+VTY TL
Sbjct: 329 SDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTL 388

Query: 114 LAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL 173
           +         +    +   + ++G+ PD + F  ++  F + GN+  A + F +M   GL
Sbjct: 389 IDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGL 448

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
            P    Y T I G    G P ++  + + M  EG   P+L TYNVL+   C   N  +A 
Sbjct: 449 KPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEG-FPPDLITYNVLINGLCKLGNFDDAN 507

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
            ++ KM   G+ PD VTY +I  A+  +G   +AEEV  +M   G+ P+  T  ++I  Y
Sbjct: 508 ELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSY 567

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
              G++  A ++   M++ GV PN++ +N LI G  +    D    + A M+   V+P+ 
Sbjct: 568 AVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNK 627

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
            TY+ ++N  S   +     +++ DM    IKPD+  +S L K   ++ +       L+ 
Sbjct: 628 YTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYK-------LLA 680

Query: 414 MIESGFHPNVVIFTTIISGWCSDG----------SMDRAIEVFDK 448
           ++     P  ++   I S W ++G          S  RAI VF+K
Sbjct: 681 VLRLENLPLAIV--EINSTWIAEGFVKLEESKNNSHFRAIHVFEK 723



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 97/411 (23%), Positives = 169/411 (41%), Gaps = 61/411 (14%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           F A+++  +++G M+ A   +W M+++           ++ G G     E SVKLLDL  
Sbjct: 88  FVAILDILAKNGFMKPA---YWVMEKAIEVKVDGGVLDVLVGIGCGRNSEVSVKLLDL-- 142

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
                         L++ +  +  + +   V +KM  +G+ PDV   N +          
Sbjct: 143 --------------LIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMV 188

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           ++ EEV   M    ++P   T   ++   CKEG++  A+     M+ +G  PN V +N+L
Sbjct: 189 NEVEEVYSVMIKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVL 248

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVN---------------------------------- 350
           + G     + D   E++  M    +                                   
Sbjct: 249 VNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGA 308

Query: 351 -PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            P V+TY+TIM +    G +   +   D M    + PD  +Y+ L  GY R     +A  
Sbjct: 309 LPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALL 368

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L   +      P+VV + T+I G C  G++D A  + D M +HG+ P++ TF  L+ G+ 
Sbjct: 369 LFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFC 428

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTF-------LLLAEARRATGLTKEAK 513
           +      A+E+   M + G+ P    +       L L    +A G+ +E K
Sbjct: 429 QMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMK 479



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/204 (22%), Positives = 92/204 (45%)

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           + +LLI+ F + +  +    V   M    + PDV   + ++        +++ +E++  M
Sbjct: 139 LLDLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVM 198

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            K  I+P    ++ +     +E E  +A E+L  M   G  PN V +  +++G    G  
Sbjct: 199 IKCQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEF 258

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           DRA E+ ++M   G+  +  T+  L+ G+ +      A ++ + M   G  P   T+  +
Sbjct: 259 DRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTI 318

Query: 500 AEARRATGLTKEAKRILSKIKNKE 523
             +    G   +A+R L  + N++
Sbjct: 319 MYSLCRLGRVSDARRYLDVMVNED 342


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 222/488 (45%), Gaps = 38/488 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   L+N L +  K +EA  +   +   G  P+ VT TTL+  L    R +    ++ 
Sbjct: 179 IVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLE 238

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF-------------------------- 165
            +++ G D D + +  +I+ F  +GN++   + F                          
Sbjct: 239 AMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLG 298

Query: 166 -WK--------MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            WK        M E G+ P   TY  LI G    G+   ++ LL+LM  +G  +P+  TY
Sbjct: 299 QWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGE-EPSNVTY 357

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM-- 274
           NVL+   C E  + +A+ ++  M   G K DVVTYNT+       G+ D+A ++   M  
Sbjct: 358 NVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFD 417

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
             N ++PN  T  ++I G CKEG++ +A++  R M + G   NLV +N+L+ G ++    
Sbjct: 418 NENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKI 477

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
               E+   + +    P+  TYS +++ +     ++  K +F +M   G+ P    Y+ L
Sbjct: 478 KEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTL 537

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
                +E   E+A+ L   M  +   P+++ F T+I G    G      E+  KM E G+
Sbjct: 538 MASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGL 597

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            P+  TF TL+   S+  +   A+  L+ M A G  P    +  L +   + G T E   
Sbjct: 598 RPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIIN 657

Query: 515 ILSKIKNK 522
           +L ++  K
Sbjct: 658 LLHQMAAK 665



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 205/430 (47%), Gaps = 9/430 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V  M  ++  L   G   EA  +   +      P +V+Y TL+  L   K+      ++ 
Sbjct: 144 VFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLL 203

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++E  G  P+S+    +++   + G M+EAM+    MK+ G       Y TLI G+   G
Sbjct: 204 EMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNG 263

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +   +L D M  +G +  N+ TY+ LV   C      EA  V++ MA  G+ PDVVTY
Sbjct: 264 NLDRGKELFDEMLGKG-ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTY 322

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     ++G A  A +++  M   G +P+  T  +++SG CKEG + +A +  R M E
Sbjct: 323 TGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIE 382

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN-----PDVITYSTIMNAWSTA 366
            G   ++V +N L+KG   + D+  VDE L L      N     P+V T++ ++      
Sbjct: 383 KGKKADVVTYNTLMKG---LCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKE 439

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G + K  +I   M K G   +   Y++L  G ++  + ++A EL   +++ GF PN   +
Sbjct: 440 GRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTY 499

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           + +I G+C    ++ A  +F +M  HG++P L  + TLM    +     +A+ + Q M  
Sbjct: 500 SILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGN 559

Query: 487 FGVHPQKSTF 496
               P   +F
Sbjct: 560 ANCEPDIISF 569



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 200/411 (48%), Gaps = 1/411 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L   G+ +EA  + N + E G  P +VTYT L+  L    R      +++
Sbjct: 284 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 343

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + E G +P ++ +N +++   + G + +A      M E G      TYNTL+KG    G
Sbjct: 344 LMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKG 403

Query: 192 KPEESVKLLDLM-SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           K +E++KL + M   E  ++PN+ T+N+L+   C E  +T+A  +  KM   G   ++VT
Sbjct: 404 KVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVT 463

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +     + G+  +A E+  ++   G  PN  T  I+I G+CK   +  A      M+
Sbjct: 464 YNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMR 523

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            +G++P L  +N L+    +    +    +   M      PD+I+++T+++    AG   
Sbjct: 524 THGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQ 583

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             KE+   M + G++PDA  +S L     +  E ++A+  L  M+ SGF P+ +++ +++
Sbjct: 584 FVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLL 643

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            G  S G     I +  +M   G   + K   T++     + Q     E+L
Sbjct: 644 KGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 694



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 193/418 (46%), Gaps = 3/418 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           PS  + + L+      ++      ++  V + G   +    N V+     +G + EAM  
Sbjct: 107 PSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGL 166

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
             +M    ++P   +YNTLI G   A K +E+V LL  M   G   PN  T   L+   C
Sbjct: 167 IREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCF-PNSVTCTTLMDGLC 225

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
            +  + EA  ++  M   G   DVV Y T+ + +  NG  D+ +E+  EM   G+  N  
Sbjct: 226 KDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVV 285

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T   ++ G C+ G+ KEA      M E+G+HP++V +  LI G  +        ++L LM
Sbjct: 286 TYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLM 345

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            E    P  +TY+ +++     G +    +I   M + G K D   Y+ L KG   + + 
Sbjct: 346 VEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKV 405

Query: 405 EKAEELLMTMI--ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           ++A +L  +M   E+   PNV  F  +I G C +G + +A+++  KM + G   NL T+ 
Sbjct: 406 DEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYN 465

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            L+ G  +A +   A E+ + +   G  P   T+ +L +      +   AK +  +++
Sbjct: 466 MLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMR 523



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 184/382 (48%), Gaps = 9/382 (2%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +++A + S N   A   + +M    + P+  + + LI+ +  A KP+    ++ L+ +
Sbjct: 78  NFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLK 137

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G    N+   N++++  C    + EA  ++ +M    + PD+V+YNT+     +  +  
Sbjct: 138 RG-FTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLK 196

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  +++EME  G  PN  TC  ++ G CK+G++ EA+     MK+ G   ++V++  LI
Sbjct: 197 EAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLI 256

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF    + D   E+   M    ++ +V+TYS +++     G   +   + + M + GI 
Sbjct: 257 SGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIH 316

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   Y+ L  G  ++     A +LL  M+E G  P+ V +  ++SG C +G +  A ++
Sbjct: 317 PDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKI 376

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF-----GVHPQKSTFLLLA 500
              M E G   ++ T+ TLM G  +     + +E L++  +       + P   TF +L 
Sbjct: 377 LRMMIEKGKKADVVTYNTLMKGLCD---KGKVDEALKLFNSMFDNENCLEPNVFTFNMLI 433

Query: 501 EARRATGLTKEAKRILSKIKNK 522
                 G   +A +I  K+  K
Sbjct: 434 GGLCKEGRLTKAVKIHRKMVKK 455



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 177/417 (42%), Gaps = 56/417 (13%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV--EE 135
           L++ L + G   +A  I   +IE G K  +VTY TL+  L  + + +    + + +   E
Sbjct: 360 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 419

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           N ++P+   FN +I    + G + +A+    KM + G      TYN L+ G   AGK +E
Sbjct: 420 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKE 479

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +++L   +   G V PN  TY++L+  +C  + +  A  +  +M   G+ P +  YNT+ 
Sbjct: 480 AMELWKQVLDLGFV-PNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLM 538

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            +  + G  +QA+ +  EM +   +P+  +   +I G  K G  +        M E G+ 
Sbjct: 539 ASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLR 598

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P                                   D +T+ST++N  S  G +D+ K  
Sbjct: 599 P-----------------------------------DALTFSTLINRLSKLGELDEAKSA 623

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            + M  +G  PDA  Y  L KG   + +  +   LL  M   G   +  I +TI++  C 
Sbjct: 624 LERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC- 682

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
                 +I+  D M         +   T   G SE       E ++Q+ ++   HP+
Sbjct: 683 -----HSIQEVDVM---------ELLPTFFQGTSEGASISCNELLMQLHQS---HPK 722



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 110/229 (48%), Gaps = 1/229 (0%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           K SC  + +   L+   ++ GK +EA  ++  +++ G  P+  TY+ L+      +  N 
Sbjct: 455 KGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNI 514

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              +  ++  +G++P    +N ++ +  + G++E+A   F +M  +   P   ++NT+I 
Sbjct: 515 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMID 574

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G   AG   + VK L +   E  ++P+  T++ L+        + EA + + +M ASG  
Sbjct: 575 GTLKAGD-FQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFT 633

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           PD + Y+++    +  G+  +   ++ +M   G   + +    I++  C
Sbjct: 634 PDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 682


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 230/487 (47%), Gaps = 36/487 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++  +++  L ++    +A  ++  + E G +P++ TY T+L +            ++ 
Sbjct: 202 VKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVP 261

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++E G  P  + FN +IN  S+ G +++A     +M ++GL  +  TYN LI GY   G
Sbjct: 262 KMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKG 321

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E++ L + M   G V P + ++N ++  +C E  +++A   +  M    + PD+++Y
Sbjct: 322 LLVEALALWEEMVTRG-VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISY 380

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   + + G   +A  ++ E+    +  N  T   +I G C+ G ++ AL+    M  
Sbjct: 381 NTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMIN 440

Query: 312 YGVHPNLVIFNLLIKGFVEI----MDRDGVDEVLAL----------------------MK 345
            G+HP++V + +L+ G  ++    M ++  DE+L +                       K
Sbjct: 441 RGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAK 500

Query: 346 EFRVN---------PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            F++          PDVITY+  +N     G +++  E+   M + G  PD   Y+    
Sbjct: 501 AFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMH 560

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
            ++      +  E+   M+  G  P VV +T +I     +G +D A+  F +M E GV P
Sbjct: 561 AHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVP 620

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N+ T+  L+ G+ + R+  +A +    M+  G+ P K T+ +L       G  +EA R+ 
Sbjct: 621 NVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLY 680

Query: 517 SKIKNKE 523
           +++  K 
Sbjct: 681 AQMLGKR 687



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 204/434 (47%), Gaps = 3/434 (0%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           M  +++ LI      +   +F  ++     P +     +L  L  +        +   + 
Sbjct: 170 MYGIVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMG 229

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           E G+ P    +N ++++F + G ++ A+D   KM+E G  P+  T+N LI G    G+ +
Sbjct: 230 EYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQ 289

Query: 195 ESVKLLDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++  L+  M++ G  V P   TYN L+  +C +  + EA  +  +M   G+ P V ++NT
Sbjct: 290 QAKGLIQEMAKAGLRVSP--YTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNT 347

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           I   + + G+   A + + +M    + P+  +   +I G+C+ G I EA      ++   
Sbjct: 348 IMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRN 407

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           +  N+V +N LI G   + D +   ++   M    ++PDV+TY+ ++N     G M   K
Sbjct: 408 LSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAK 467

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E FD+M   G+ PD  AY+    G ++  +  KA +L   M+  GF P+V+ +   ++G 
Sbjct: 468 EFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGL 527

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G+++ A E+  KM   G  P+  T+ + M  + E        EI   M + G  P  
Sbjct: 528 CKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTV 587

Query: 494 STFLLLAEARRATG 507
            T+ +L  A    G
Sbjct: 588 VTYTVLIHAHALNG 601



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 189/400 (47%), Gaps = 7/400 (1%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +  ++  N   PD    N ++    +   + +A++ +  M E G+ PT +TYNT++  + 
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G+ + ++ L+  M   G   P+  T+NVL+     +  + +A  ++ +MA +G++   
Sbjct: 249 KGGEVQRALDLVPKMQERG-CYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSP 307

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TYN +   Y + G   +A  +  EM   GV P   +   I+ G+CKEGK+ +A +    
Sbjct: 308 YTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSD 367

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWST 365
           M +  + P+++ +N LI GF  +     + E   L+ E R   ++ +++TY+T+++    
Sbjct: 368 MLKKNLMPDIISYNTLIYGFCRL---GNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCR 424

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G ++   ++ +DM   GI PD   Y++L  G  +      A+E    M+  G  P+   
Sbjct: 425 LGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFA 484

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +T  I G    G   +A ++ ++M   G  P++ T+   + G  +      A E+LQ M 
Sbjct: 485 YTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMI 544

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
             G  P   T+     A    G  +E + I   + ++ +T
Sbjct: 545 RDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQT 584



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/423 (24%), Positives = 183/423 (43%), Gaps = 36/423 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L ++G+ Q+A+ +   + + G + S  TY  L+     +       ++  ++   G
Sbjct: 278 LINGLSKKGELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRG 337

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P     N ++  F + G M +A      M +  L P   +YNTLI G+   G   E+ 
Sbjct: 338 VSPTVASHNTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAF 397

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LLD + R  N+  N+ TYN L+   C   ++  A  +   M   G+ PDVVTY  +   
Sbjct: 398 ILLDEL-RFRNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNG 456

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G    A+E   EM H G+ P+       I G  K G   +A +    M   G  P+
Sbjct: 457 ACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPD 516

Query: 318 LVIFNLLIKGFVEI------------MDRDGV-----------------------DEVLA 342
           ++ +N+ + G  ++            M RDG                         E+  
Sbjct: 517 VITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFY 576

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M      P V+TY+ +++A +  G +D     F +M + G+ P+   Y++L  G+ + +
Sbjct: 577 DMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVR 636

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           + ++A +  + M E G  PN   +T +I+  C+ G    A+ ++ +M    + P+  T  
Sbjct: 637 KMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHG 696

Query: 463 TLM 465
            L+
Sbjct: 697 ALL 699



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 196/438 (44%), Gaps = 13/438 (2%)

Query: 85  RGKPQEAQAIFNN-LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
           R KP  A   F   L + G K S   +  +L  L       S + +M ++    M     
Sbjct: 116 REKPTIALRFFKCVLTQPGFKTSEYAFCAILQILVDNCLMKSAYWVMERIISFEM----- 170

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL- 202
               +++         + +  F KM  +   P     N ++K   I       VK L++ 
Sbjct: 171 --YGIVDVLIGGYLNYQCLLVFEKMMRNRFLPDVKNCNRILK---ILRDKNLLVKALEVY 225

Query: 203 -MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M  E  ++P + TYN ++ ++C    +  A +++ KM   G  P  VT+N +    ++ 
Sbjct: 226 RMMGEYGIRPTVTTYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKK 285

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           GE  QA+ +I EM   G++ +  T   +I GYCK+G + EAL     M   GV P +   
Sbjct: 286 GELQQAKGLIQEMAKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASH 345

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N ++ GF +        + L+ M +  + PD+I+Y+T++  +   G + +   + D++  
Sbjct: 346 NTIMYGFCKEGKMSDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRF 405

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
             +  +   Y+ L  G  R  + E A +L   MI  G HP+VV +T +++G C  G+M  
Sbjct: 406 RNLSFNIVTYNTLIDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLM 465

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A E FD+M   G++P+   +   + G  +     +A ++ + M   G  P   T+ +   
Sbjct: 466 AKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVN 525

Query: 502 ARRATGLTKEAKRILSKI 519
                G  +EA  +L K+
Sbjct: 526 GLCKLGNLEEAGELLQKM 543



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 147/325 (45%), Gaps = 1/325 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   L+      G   EA  + + L       ++VTY TL+  L       +   +  
Sbjct: 377 IISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDLETALKLKE 436

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ PD + +  ++N   + GNM  A + F +M   GL P    Y   I G    G
Sbjct: 437 DMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLG 496

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              ++ KL + M  +G   P++ TYNV V   C   N+ EA  ++ KM   G  PD VTY
Sbjct: 497 DTAKAFKLQEEMLTKG-FPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTY 555

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            +   A+ +NG   +  E+  +M   G  P   T  ++I  +   G++  A+ +   M+E
Sbjct: 556 TSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQE 615

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV PN++ +N+LI GF ++   D   +    M+E  + P+  TY+ ++N     G   +
Sbjct: 616 KGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMGKWQE 675

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAK 396
              ++  M    I+PD+  +  L K
Sbjct: 676 ALRLYAQMLGKRIRPDSCTHGALLK 700



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/227 (22%), Positives = 109/227 (48%), Gaps = 2/227 (0%)

Query: 83  IERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS 142
           ++ G   +A  +   ++  G  P ++TY   +  L           ++ ++  +G  PD 
Sbjct: 493 LKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDH 552

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           + + + ++A  E+G++ E  + F+ M   G TPT  TY  LI  + + G+ + ++     
Sbjct: 553 VTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLE 612

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           M  +G V PN+ TYNVL+  +C  + + +A     +M   G+ P+  TY  +       G
Sbjct: 613 MQEKG-VVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENCNMG 671

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +A  +  +M    ++P+  T G ++    K+ K+ +A++F  ++
Sbjct: 672 KWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKV-QAVQFIESL 717


>gi|147798989|emb|CAN61637.1| hypothetical protein VITISV_008458 [Vitis vinifera]
          Length = 708

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 220/463 (47%), Gaps = 8/463 (1%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           N+    + +++  +++  +  G  + A+ +F  + + G  P  V++  ++ A     R  
Sbjct: 182 NQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVL 241

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
                ++ + E G   D+     +I+AF + G +   +  FWKM E GL P    +  LI
Sbjct: 242 EAEKWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALI 301

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-G 243
            G    G  +++ +LL+ M R G  KPN+ T+  L+   C +    +A+ +  K+  S G
Sbjct: 302 NGLCKQGSIKQAFELLEEMVRRG-WKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDG 360

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
            KP+V TY  +   Y +  + ++AE ++  M+  G+ PN  T   +I G+CK G    A 
Sbjct: 361 YKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAY 420

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIM 360
                M + G  PN+  +N +I G  +   +  +DE   L+ +  V+    D +TY+ +M
Sbjct: 421 ELMDLMGKEGFSPNIYTYNAIIDGLCK---KGSLDEAYRLLNKVSVHGLQADGVTYTILM 477

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           +        ++    F+ M K G  PD H+Y+ L   + R+++ +++E L    +  G  
Sbjct: 478 SVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISXFCRQKQMKESERLFEEAVSLGLI 537

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P    +T++I G+C  G+   A+++F +M  HG +P+  T+  L+ G  +  +   A  +
Sbjct: 538 PTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNL 597

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
              M   G+ P + T L LA        +  A  +L +++ ++
Sbjct: 598 YDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQ 640



 Score =  128 bits (322), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 79/295 (26%), Positives = 147/295 (49%), Gaps = 7/295 (2%)

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           + EA N++ +M   G+     T N +       G  + AE + VEM   GV P+  +  +
Sbjct: 170 LKEAVNMVVEMQNQGLVXSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKL 229

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MK 345
           ++   C  G++ EA ++   M E G   +     L+I  F +   +  V+ V+     M 
Sbjct: 230 MVVACCNMGRVLEAEKWLNAMVERGFIVDNATCTLIIDAFCQ---KGYVNRVVGYFWKMV 286

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           E  + P+VI ++ ++N     G + +  E+ ++M + G KP+ + ++ L  G  ++   E
Sbjct: 287 EMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTE 346

Query: 406 KAEELLMTMIES-GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           KA  L + ++ S G+ PNV  +T +I+G+C +  ++RA  +  +M E G+ PN  T+ TL
Sbjct: 347 KAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTL 406

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           + G+ +     RA E++ +M   G  P   T+  + +     G   EA R+L+K+
Sbjct: 407 IDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKV 461



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 79/168 (47%), Gaps = 4/168 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S T L++    + + +E++ +F   +  G  P+  TYT+++         +    +  
Sbjct: 505 IHSYTTLISXFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQ 564

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G  PDSI + A+I+   +   +++A + +  M + GL+P   T  TL   Y    
Sbjct: 565 RMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKD 624

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
               ++ +LD + +    +  +RT N LVR  C+E  +  A    HK+
Sbjct: 625 DSSTAINVLDRLEK----RQWIRTVNTLVRKLCSEGKLDMAALFFHKL 668


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 218/457 (47%), Gaps = 8/457 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           + +++  +++  +  G  + A+ +F  + + G  P  V++  ++ A     R       +
Sbjct: 188 STQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWL 247

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + + E G   D+     +I+AF + G +   +  FWKM E GL P    +  LI G    
Sbjct: 248 NAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQ 307

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVV 249
           G  +++ +LL+ M R G  KPN+ T+  L+   C +    +A+ +  K+  S G KP+V 
Sbjct: 308 GSIKQAFELLEEMVRRG-WKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVH 366

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +   Y +  + ++AE ++  M+  G+ PN  T   +I G+CK G    A      M
Sbjct: 367 TYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLM 426

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTA 366
            + G  PN+  +N +I G  +   +  +DE   L+ +  V+    D +TY+ +M+     
Sbjct: 427 GKEGFSPNIYTYNAIIDGLCK---KGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQ 483

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
              ++    F+ M K G  PD H+Y+ L   + R+++ +++E L    +  G  P    +
Sbjct: 484 ADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTY 543

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           T++I G+C  G+   A+++F +M  HG +P+  T+  L+ G  +  +   A  +   M  
Sbjct: 544 TSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMD 603

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            G+ P + T L LA        +  A  +L +++ ++
Sbjct: 604 KGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQ 640



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/406 (23%), Positives = 188/406 (46%), Gaps = 37/406 (9%)

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK---GYGIA------------------ 190
           F+E+G ++EA++   +M+  GL P+T T N ++    G G+                   
Sbjct: 164 FAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD 223

Query: 191 --------------GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
                         G+  E+ + L+ M   G +  N  T  +++ A+C +  +       
Sbjct: 224 CVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDN-ATCTLIIDAFCQKGYVNRVVGYF 282

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
            KM   G+ P+V+ +  +     + G   QA E++ EM   G +PN  T   +I G CK+
Sbjct: 283 WKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKK 342

Query: 297 GKIKEALR-FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           G  ++A R F + ++  G  PN+  +  +I G+ +    +  + +L+ M+E  + P+  T
Sbjct: 343 GWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNT 402

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+T+++     G   +  E+ D MGK G  P+ + Y+ +  G  ++   ++A  LL  + 
Sbjct: 403 YTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVS 462

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G   + V +T ++S  C     +R++  F+KM + G +P++ ++ TL+  +   +Q  
Sbjct: 463 VHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMK 522

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            +E + +   + G+ P K T+  +       G T  A ++  ++ N
Sbjct: 523 ESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSN 568



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 154/318 (48%), Gaps = 2/318 (0%)

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           ++  +   GK +E+V ++  M  +G V P+ +T N ++        +  A N+  +M   
Sbjct: 160 MVMNFAENGKLKEAVNMVVEMQNQGLV-PSTQTLNCVLDVAVGMGLVEIAENMFVEMCQR 218

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ PD V++  +  A    G   +AE  +  M   G   +  TC +II  +C++G +   
Sbjct: 219 GVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKGYVNRV 278

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           + +   M E G+ PN++ F  LI G  +        E+L  M      P+V T++T+++ 
Sbjct: 279 VGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHTTLIDG 338

Query: 363 WSTAGFMDKCKEIFDDMGKA-GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
               G+ +K   +F  + ++ G KP+ H Y+ +  GY +E +  +AE LL  M E G  P
Sbjct: 339 LCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVP 398

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           N   +TT+I G C  G+  RA E+ D M + G SPN+ T+  ++ G  +      A  +L
Sbjct: 399 NTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLL 458

Query: 482 QIMKAFGVHPQKSTFLLL 499
             +   G+     T+ +L
Sbjct: 459 NKVSVHGLQADGVTYTIL 476



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 80/168 (47%), Gaps = 4/168 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S T L+++   + + +E++ +F   +  G  P+  TYT+++         +    +  
Sbjct: 505 IHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQ 564

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G  PDSI + A+I+   +   +++A + +  M + GL+P   T  TL   Y    
Sbjct: 565 RMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKD 624

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
               ++ +LD + +    +  +RT N LVR  C+E  +  A    HK+
Sbjct: 625 DSSTAINVLDRLEK----RQWIRTVNTLVRKLCSEGKLDMAALFFHKL 668


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 211/423 (49%), Gaps = 1/423 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L+  L++ G  +EA  ++  +I  G KPS+ TY+ L+ AL  ++   +I  ++ ++
Sbjct: 194 SYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEM 253

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E  G+ P+   +   I     +G +++A      M++ G  P   TY  LI     AGK 
Sbjct: 254 ETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKL 313

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +++ +L   M R  + KP+L TY  L+  + N  ++        +M A G  PDVVTY  
Sbjct: 314 DKAKELYTKM-RASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTI 372

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A  ++G+ DQA +++  M   G+ PN  T   +ISG     ++ EAL     M+  G
Sbjct: 373 LVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLG 432

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V P    + L I  + ++ D +   +    MK+  + P +   +  + + +  G + + K
Sbjct: 433 VAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAK 492

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           +IF+D+   G+ PD+  Y+++ K Y +  + +KA +LL  M+  G  P++++  ++I   
Sbjct: 493 DIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTL 552

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G +D A ++F ++ +  ++P + T+  L+ G  +  +  +A ++   MK  G  P  
Sbjct: 553 YKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNT 612

Query: 494 STF 496
            TF
Sbjct: 613 VTF 615



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/446 (24%), Positives = 216/446 (48%), Gaps = 4/446 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T  +  L   G+  +A  I   + + G  P +VTYT L+ AL    + +    + +
Sbjct: 262 IYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYT 321

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIA 190
           ++  +   PD + +  +++ F   G++E  +  FW +M+  G  P   TY  L++    +
Sbjct: 322 KMRASSHKPDLVTYITLMSKFGNYGDLE-TVKRFWSEMEADGYAPDVVTYTILVEALCKS 380

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK +++  +LD+M   G V PNL TYN L+    N + + EA  + + M + G+ P   +
Sbjct: 381 GKVDQAFDMLDVMRVRGIV-PNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYS 439

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y      Y + G+ ++A +   +M+  G+ P+   C   +    + G+I+EA      + 
Sbjct: 440 YVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIH 499

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P+ V +N+++K + +    D   ++L  M      PD+I  +++++    AG +D
Sbjct: 500 NCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVD 559

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  ++F  +    + P    Y+IL  G  +E +  KA +L  +M ESG  PN V F  ++
Sbjct: 560 EAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALL 619

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C + ++D A+++F +M     SP++ T+ T+++G  +  +   A      MK F + 
Sbjct: 620 DCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LS 678

Query: 491 PQKSTFLLLAEARRATGLTKEAKRIL 516
           P   T   L       G  ++A +I+
Sbjct: 679 PDHVTLYTLLPGVVKDGRVEDAIKIV 704



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/513 (23%), Positives = 223/513 (43%), Gaps = 72/513 (14%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           + SL E G+ +EA+ IFN++   G  P  VTY  ++   +   + +    +++++   G 
Sbjct: 479 LYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGC 538

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           +PD I  N++I+   ++G ++EA   F ++K+  L PT  TYN LI G G  GK  +++ 
Sbjct: 539 EPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALD 598

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI---- 254
           L   M +E    PN  T+N L+   C    +  A  +  +M      PDV+TYNTI    
Sbjct: 599 LFGSM-KESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGL 657

Query: 255 ------------------------ATAY------AQNGEADQAEEVIVEMEH-NGVQPNG 283
                                    T Y       ++G  + A ++++E  H +G+Q + 
Sbjct: 658 IKEGRAGYAFWFYHQMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSN 717

Query: 284 RTCGIIISGYCKEGKIKEALRFARTM---------------------------------- 309
           +  G ++     E +I+EA+ FA  +                                  
Sbjct: 718 QVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDK 777

Query: 310 --KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
             K  G HP    +N L+ G +     +   ++   MK     P++ TY+ +++A   + 
Sbjct: 778 FTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSK 837

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +D+  E++++M   G KP+   ++I+    V+     KA +L   +I   F P    + 
Sbjct: 838 RIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYG 897

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +I G    G  + A+++F++M ++   PN   +  L+ G+ +A     A ++ + M   
Sbjct: 898 PLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKE 957

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           G+ P   ++ +L E    TG   +A     ++K
Sbjct: 958 GIRPDLKSYTILVECLFMTGRVDDAVHYFEELK 990



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 101/413 (24%), Positives = 200/413 (48%), Gaps = 1/413 (0%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           TY T+  AL+I+         + ++ + G   ++  +N +I    + G  +EA+  + +M
Sbjct: 159 TYLTIFKALSIKGGIRQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRM 218

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
              GL P+  TY+ L+   G        + LL+ M   G ++PN+ TY + +R       
Sbjct: 219 ISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLG-LRPNIYTYTICIRVLGRAGR 277

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           I +A+ ++  M   G  PDVVTY  +  A    G+ D+A+E+  +M  +  +P+  T   
Sbjct: 278 IDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYIT 337

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           ++S +   G ++   RF   M+  G  P++V + +L++   +    D   ++L +M+   
Sbjct: 338 LMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRG 397

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           + P++ TY+T+++       +D+  E+F++M   G+ P A++Y +    Y +  +PEKA 
Sbjct: 398 IVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKAL 457

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           +    M + G  P++      +      G +  A ++F+ +   G+SP+  T+  +M  Y
Sbjct: 458 DTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCY 517

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           S+A Q  +A ++L  M + G  P       L +     G   EA ++  ++K+
Sbjct: 518 SKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKD 570



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 126/534 (23%), Positives = 229/534 (42%), Gaps = 81/534 (15%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  E C   V + T L+++L   GK  +A+ ++  +    HKP LVTY TL++       
Sbjct: 288 MEDEGCGPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGD 347

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
             ++    S++E +G  PD + +  ++ A  +SG +++A D    M+  G+ P   TYNT
Sbjct: 348 LETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNT 407

Query: 183 LIKG-----------------------------------YGIAGKPEESVKLLDLMSREG 207
           LI G                                   YG  G PE+++   + M + G
Sbjct: 408 LISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRG 467

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
            + P++   N  + +      I EA ++ + +   G+ PD VTYN +   Y++ G+ D+A
Sbjct: 468 -IMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKA 526

Query: 268 EEVIVEMEHNGVQPN------------------------GR-----------TCGIIISG 292
            +++ EM   G +P+                        GR           T  I+I+G
Sbjct: 527 TKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITG 586

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKEFRV 349
             KEGK+ +AL    +MKE G  PN V FN L+    +    D VD  L +   M     
Sbjct: 587 LGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCK---NDAVDLALKMFCRMTIMNC 643

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
           +PDV+TY+TI+      G        +  M K  + PD      L  G V++   E A +
Sbjct: 644 SPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKDGRVEDAIK 702

Query: 410 LLMTMI-ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           ++M  + +SG   +  ++  ++     +  ++ AI   + +  + +  +      L+   
Sbjct: 703 IVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVL 762

Query: 469 SEARQPWRAEEIL-QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            + ++   A+++  +  K+ G HP   ++  L +      +T+ A ++  ++KN
Sbjct: 763 CKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKN 816



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/425 (24%), Positives = 202/425 (47%), Gaps = 3/425 (0%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
            ++  L+  +++ G+ ++A  I    + + G + S   +  L+  + I+       S    
Sbjct: 683  TLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEG 742

Query: 133  VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES-GLTPTTSTYNTLIKGYGIAG 191
            +  N +  D      +I    +     +A   F K  +S G  PT  +YN L+ G     
Sbjct: 743  LVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCN 802

Query: 192  KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E ++KL   M   G   PN+ TYN+L+ A    K I E + + ++M   G KP+++T+
Sbjct: 803  ITEAALKLFVEMKNAGCC-PNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITH 861

Query: 252  NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            N I +A  ++   ++A ++  E+      P   T G +I G  K G+ +EA++    M +
Sbjct: 862  NIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPD 921

Query: 312  YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            Y   PN  I+N+LI GF +  + +   ++   M +  + PD+ +Y+ ++      G +D 
Sbjct: 922  YQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDD 981

Query: 372  CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
                F+++   G+ PD  +Y+++  G  + +  E+A  L   M   G  P +  +  +I 
Sbjct: 982  AVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALIL 1041

Query: 432  GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             + + G +D+A ++F+++   G+ PN+ T+  L+ G+S++    RA  + + M   G  P
Sbjct: 1042 HFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSP 1101

Query: 492  QKSTF 496
               TF
Sbjct: 1102 NAGTF 1106



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 96/417 (23%), Positives = 193/417 (46%), Gaps = 3/417 (0%)

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
           H P    Y  +L  L +  R   +  +   +++  ++ +   +  +  A S  G + +A 
Sbjct: 120 HTPETCNY--MLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAP 177

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
               KM+++G      +YN LI      G  +E++K+   M  EG +KP+++TY+ L+ A
Sbjct: 178 FALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEG-LKPSMKTYSALMVA 236

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
               ++     +++ +M   G++P++ TY        + G  D A  ++  ME  G  P+
Sbjct: 237 LGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPD 296

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T  ++I   C  GK+ +A      M+     P+LV +  L+  F    D + V    +
Sbjct: 297 VVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWS 356

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M+     PDV+TY+ ++ A   +G +D+  ++ D M   GI P+ H Y+ L  G +  +
Sbjct: 357 EMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLR 416

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             ++A EL   M   G  P    +   I  +   G  ++A++ F+KM + G+ P++    
Sbjct: 417 RLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACN 476

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             ++  +E  +   A++I   +   G+ P   T+ ++ +     G   +A ++L+++
Sbjct: 477 ASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEM 533



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 164/377 (43%), Gaps = 36/377 (9%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++      G +E+    F  M++  +    +TY T+ K   I G   ++   L  M +
Sbjct: 126 NYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTIFKALSIKGGIRQAPFALGKMRQ 185

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G V  N  +YN L+          EA  V  +M + G+KP + TY+ +  A  +  +  
Sbjct: 186 AGFVL-NAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTG 244

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
              +++ EME  G++PN  T  I I    + G+I +A    +TM++ G            
Sbjct: 245 TIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGC----------- 293

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                                    PDV+TY+ +++A   AG +DK KE++  M  +  K
Sbjct: 294 ------------------------GPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHK 329

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   Y  L   +    + E  +     M   G+ P+VV +T ++   C  G +D+A ++
Sbjct: 330 PDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDM 389

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
            D M   G+ PNL T+ TL+ G    R+   A E+   M++ GV P   +++L  +    
Sbjct: 390 LDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGK 449

Query: 506 TGLTKEAKRILSKIKNK 522
            G  ++A     K+K +
Sbjct: 450 LGDPEKALDTFEKMKKR 466



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 103/489 (21%), Positives = 206/489 (42%), Gaps = 43/489 (8%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            TV +   L+  L + GK  +A  +F ++ E G  P+ VT+  LL  L      +    + 
Sbjct: 576  TVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMF 635

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++      PD + +N +I    + G    A   + +MK+  L+P   T  TL+ G    
Sbjct: 636  CRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF-LSPDHVTLYTLLPGVVKD 694

Query: 191  GKPEESVKLLDLMSREGNVKPNLRTYN--------------------------------- 217
            G+ E+++K++     +  ++ + + +                                  
Sbjct: 695  GRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNL 754

Query: 218  --VLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
               L+R  C +K   +A  +  K   S G  P   +YN +          + A ++ VEM
Sbjct: 755  ILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEM 814

Query: 275  EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
            ++ G  PN  T  +++  + K  +I E       M   G  PN++  N++I   V+    
Sbjct: 815  KNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVK---S 871

Query: 335  DGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
            + +++ L L  E      +P   TY  ++     AG  ++  +IF++M     KP+   Y
Sbjct: 872  NSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIY 931

Query: 392  SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
            +IL  G+ +      A +L   MI+ G  P++  +T ++      G +D A+  F+++  
Sbjct: 932  NILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKL 991

Query: 452  HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
             G+ P+  ++  ++ G  ++R+   A  +   MK  G+ P+  T+  L       G+  +
Sbjct: 992  TGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQ 1051

Query: 512  AKRILSKIK 520
            A ++  +++
Sbjct: 1052 AGKMFEELQ 1060



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 80/362 (22%), Positives = 165/362 (45%), Gaps = 42/362 (11%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            T  S   LM+ L+     + A  +F  +   G  P++ TY  LL A    KR + +  + 
Sbjct: 787  TPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELY 846

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++   G  P+ I  N +I+A  +S ++ +A+D ++++     +PT  TY  LI G   A
Sbjct: 847  NEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKA 906

Query: 191  GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            G+ E                                    EA  +  +M     KP+   
Sbjct: 907  GRSE------------------------------------EAMKIFEEMPDYQCKPNCAI 930

Query: 251  YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            YN +   + + G  + A ++   M   G++P+ ++  I++      G++ +A+ +   +K
Sbjct: 931  YNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELK 990

Query: 311  EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
              G+ P+ V +NL+I G  +      ++E L+L  E +   ++P++ TY+ ++  +  AG
Sbjct: 991  LTGLDPDTVSYNLMINGLGK---SRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAG 1047

Query: 368  FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
             +D+  ++F+++   G++P+   Y+ L +G+ +    ++A  +   M+  G  PN   F 
Sbjct: 1048 MVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFA 1107

Query: 428  TI 429
             +
Sbjct: 1108 QL 1109



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 141/297 (47%), Gaps = 1/297 (0%)

Query: 65   NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
            N   C  + +   L+++  +  +  E   ++N ++  G KP+++T+  +++AL      N
Sbjct: 816  NAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSIN 875

Query: 125  SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
                +  ++      P    +  +I    ++G  EEAM  F +M +    P  + YN LI
Sbjct: 876  KALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILI 935

Query: 185  KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
             G+G AG    +  L   M +EG ++P+L++Y +LV        + +A +   ++  +G+
Sbjct: 936  NGFGKAGNVNIACDLFKRMIKEG-IRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGL 994

Query: 245  KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
             PD V+YN +     ++   ++A  +  EM++ G+ P   T   +I  +   G + +A +
Sbjct: 995  DPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGK 1054

Query: 305  FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
                ++  G+ PN+  +N LI+G  +  ++D    V   M     +P+  T++ + N
Sbjct: 1055 MFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMMIVGCSPNAGTFAQLPN 1111


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  189 bits (479), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 225/448 (50%), Gaps = 7/448 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            V +   L+N L   G+  EA A+ N ++  G    +VTY T++  +       S  +++
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S++EE  + PD + ++A+I+   + G+  +A   F +M E G+ P   TYN +I G+   
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344

Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           G+  ++ +LL D++ RE  + P++ T+N L+ A   E  + EA  +  +M    + PD V
Sbjct: 345 GRWSDAQRLLRDMIERE--INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN++   + ++   D A+ +   M      P+  T   II  YC+  ++ E ++  R +
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G+  N   +N LI GF E+ + +   ++   M    V PD IT + ++  +     +
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           ++  E+F+ +  + I  D  AY+I+  G  +  + ++A +L  ++   G  P+V  +  +
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           ISG+C   ++  A  +F KM ++G  P+  T+ TL+ G  +A +  ++ E++  M++ G 
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 638

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILS 517
                T  ++A+      L K    +LS
Sbjct: 639 SGDAFTIKMVADLITDGRLDKSFSDMLS 666



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 222/447 (49%), Gaps = 12/447 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L   ++E G   EA A+F+ ++E G  P ++T+ TL+  L ++ R     ++++++   G
Sbjct: 198 LFGYMVETG-FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D + +  ++N   + G+ + A++   KM+E+ + P    Y+ +I      G   ++ 
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M  +G + PN+ TYN ++  +C+    ++A  ++  M    + PDV+T+N + +A
Sbjct: 317 YLFSEMLEKG-IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+  +AE++  EM H  + P+  T   +I G+CK  +  +A    + M +    P+
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPD 431

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
           +V FN +I  +        VDE + L++E     +  +  TY+T+++ +     ++  ++
Sbjct: 432 VVTFNTIIDVYCR---AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +F +M   G+ PD    +IL  G+   ++ E+A EL   +  S    + V +  II G C
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
               +D A ++F  +  HGV P+++T+  ++ G+        A  +   MK  G  P  S
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKN 521
           T+  L       G   ++  ++S++++
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRS 635



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 199/430 (46%), Gaps = 20/430 (4%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T     K++   +   +P  A +++  +       ++ ++  L+       + +   S  
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES---------------GLTP 175
            ++ + G  PD + FN +++       + EA+  F  M E+               GLTP
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTP 224

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
              T+NTLI G  + G+  E+  L++ M  +G +  ++ TY  +V   C   +   A N+
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNL 283

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
           + KM  + +KPDVV Y+ I     ++G    A+ +  EM   G+ PN  T   +I G+C 
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
            G+  +A R  R M E  ++P+++ FN LI   V+       +++   M    + PD +T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y++++  +      D  K +FD M      PD   ++ +   Y R +  ++  +LL  + 
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G   N   + T+I G+C   +++ A ++F +M  HGV P+  T   L++G+ E  +  
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519

Query: 476 RAEEILQIMK 485
            A E+ ++++
Sbjct: 520 EALELFEVIQ 529



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 175/371 (47%), Gaps = 19/371 (5%)

Query: 140 PDSIF-FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           P +I+ FN +I  F +   +  ++ TF K+ + G  P   T+NTL+ G  +  +  E++ 
Sbjct: 138 PLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA 197

Query: 199 LLDLMSREG--------------NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           L   M   G               + P + T+N L+   C E  + EA  +++KM   G+
Sbjct: 198 LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
             DVVTY TI     + G+   A  ++ +ME   ++P+      II   CK+G   +A  
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               M E G+ PN+  +N +I GF           +L  M E  +NPDV+T++ +++A  
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G + + +++ D+M    I PD   Y+ +  G+ +    + A+ +   M      P+VV
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVV 433

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            F TII  +C    +D  +++  ++   G+  N  T+ TL+ G+ E      A+++ Q M
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493

Query: 485 KAFGVHPQKST 495
            + GV P   T
Sbjct: 494 ISHGVCPDTIT 504



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 91/381 (23%), Positives = 179/381 (46%), Gaps = 20/381 (5%)

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
           ++++A+D F  M  S    T    N +I  +    +P+ ++ L   M     +  N+ ++
Sbjct: 86  SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR-RIPLNIYSF 144

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT----------IATAYAQNG---E 263
           N+L++ +C+   ++ + +   K+   G +PDVVT+NT          I+ A A  G   E
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204

Query: 264 ADQAEEVIV--EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
               E V +  +M   G+ P   T   +I+G C EG++ EA      M   G+H ++V +
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
             ++ G  ++ D      +L+ M+E  + PDV+ YS I++     G     + +F +M +
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            GI P+   Y+ +  G+        A+ LL  MIE   +P+V+ F  +IS    +G +  
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A ++ D+M    + P+  T+ ++++G+ +  +   A+ +  +M +    P   TF  + +
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIID 440

Query: 502 ARRATGLTKEAKRILSKIKNK 522
                    E  ++L +I  +
Sbjct: 441 VYCRAKRVDEGMQLLREISRR 461



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 21/314 (6%)

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           K++ +A +    M  S      V  N +   + +    D A  +  +ME   +  N  + 
Sbjct: 85  KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL--- 343
            I+I  +C   K+  +L     + + G  P++V FN L+ G       D + E LAL   
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCL---EDRISEALALFGY 201

Query: 344 ---------------MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
                          M E  + P VIT++T++N     G + +   + + M   G+  D 
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y  +  G  +  + + A  LL  M E+   P+VVI++ II   C DG    A  +F +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M E G++PN+ T+  ++ G+    +   A+ +L+ M    ++P   TF  L  A    G 
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381

Query: 509 TKEAKRILSKIKNK 522
             EA+++  ++ ++
Sbjct: 382 LFEAEKLCDEMLHR 395


>gi|224126121|ref|XP_002329666.1| predicted protein [Populus trichocarpa]
 gi|222870547|gb|EEF07678.1| predicted protein [Populus trichocarpa]
          Length = 821

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 215/445 (48%), Gaps = 1/445 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           +L+ + +  G  +E  A+ + + E G KP+ VTYTT++ A     + +   S+  Q++E+
Sbjct: 355 ELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKES 414

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  P+   +NA++    +    EE M     MK  G  P   T+NT++   G  G  +  
Sbjct: 415 GCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYV 474

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            ++   M   G  +P+  T+N L+ A     +  +A  +  +M  +G  P V TYN +  
Sbjct: 475 KRVFQEMKSCG-FEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLN 533

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A A+ G+   AE VI +M++ G +P+  +  +I++ Y K G +K   R  + + +  + P
Sbjct: 534 ALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIFP 593

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           + ++   LI    +     G++     +++    PD++ ++++++ +S     D+  EI 
Sbjct: 594 SWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIM 653

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             + + G++PD   Y+ L   Y R  E  KAEE+L  +  SG   +++ + T+I G+C  
Sbjct: 654 HLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCRQ 713

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G M  A+    +M   G+ P + T+ T + GY+        +E+L  M      P + T+
Sbjct: 714 GLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTY 773

Query: 497 LLLAEARRATGLTKEAKRILSKIKN 521
            ++ +        KEA   +S I +
Sbjct: 774 KIVVDGYCKAKKFKEAMDFVSTITD 798



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 224/494 (45%), Gaps = 53/494 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           VR+ T +++S    GK + A AIF  + E G  P+LVTY  +L     + + +N I  ++
Sbjct: 209 VRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRSWNKILGLL 268

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+  D    + VI+A    G ++EA + F  +K  G  P T TYN L++ +G A
Sbjct: 269 DEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKA 328

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E++ ++  M  + N  P+  TYN LV A+       E   ++  M  +G+KP+ VT
Sbjct: 329 GIYSEALSIMKEM-EDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVT 387

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+  AY +  + D+A  +  +M+ +G  PN  T   I+    K+ + +E ++    MK
Sbjct: 388 YTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMK 447

Query: 311 EYGVHPNLVIFNLLI-----KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
             G  PN + +N ++     KG  + + R     V   MK     PD  T++T++ A   
Sbjct: 448 VDGCAPNRITWNTMLSMCGNKGMHKYVKR-----VFQEMKSCGFEPDRDTFNTLITASGR 502

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G     ++I+D+M +AG  P    Y+ L     R  +   AE ++  M   GF P+   
Sbjct: 503 CGSDIDAEKIYDEMLEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETS 562

Query: 426 FTTIISGWCSDG--------------------------------------SMDRAIEVFD 447
           ++ I++ +   G                                       M+RA +   
Sbjct: 563 YSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQ 622

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           K   HG  P+L  F +++  +S      RA EI+ +++  G+ P   T+  L +     G
Sbjct: 623 K---HGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGG 679

Query: 508 LTKEAKRILSKIKN 521
              +A+ IL +++N
Sbjct: 680 ECWKAEEILRELQN 693



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 201/434 (46%), Gaps = 1/434 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   EA+  F  L   G+ P  VTY  LL        ++   SIM ++E+N   PD++ +
Sbjct: 294 GLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTY 353

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++ A+  +G  EE       M E+G+ P   TY T+I  YG A + ++++ L D M +
Sbjct: 354 NELVAAYVRAGFYEEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQM-K 412

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           E    PN+ TYN ++     +    E   ++  M   G  P+ +T+NT+ +     G   
Sbjct: 413 ESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHK 472

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
             + V  EM+  G +P+  T   +I+   + G   +A +    M E G  P++  +N L+
Sbjct: 473 YVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALL 532

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                  D    + V+  MK     P   +YS I+N+++  G++     I  D+    I 
Sbjct: 533 NALARRGDWRTAESVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRIEKDIYDGHIF 592

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P       L     + +     E     + + G+ P++V+F +++S +      DRA E+
Sbjct: 593 PSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRAHEI 652

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
              + E G+ P+L T+ +LM  Y+   + W+AEEIL+ ++  G      ++  + +    
Sbjct: 653 MHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKGFCR 712

Query: 506 TGLTKEAKRILSKI 519
            GL  EA R LS++
Sbjct: 713 QGLMHEALRTLSEM 726



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 194/400 (48%), Gaps = 1/400 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++N+     +  +A ++++ + E G  P++ TY  +L  L  + +   +  I+  +
Sbjct: 387 TYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDM 446

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + +G  P+ I +N +++     G  +     F +MK  G  P   T+NTLI   G  G  
Sbjct: 447 KVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSD 506

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ K+ D M  E    P++ TYN L+ A     +   A +V+  M   G KP   +Y+ 
Sbjct: 507 IDAEKIYDEM-LEAGFTPSVATYNALLNALARRGDWRTAESVIKDMKNKGFKPSETSYSL 565

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           I  +YA+ G       +  ++    + P+      +I    K   +    R  + ++++G
Sbjct: 566 ILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQALQKHG 625

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P+LV+FN ++  F      D   E++ L++E  + PD++TY+++M+ ++  G   K +
Sbjct: 626 YKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAE 685

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           EI  ++  +G K D  +Y+ + KG+ R+    +A   L  MI  G  P +V + T + G+
Sbjct: 686 EILRELQNSGDKSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGY 745

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
            + G      EV   M +H   PN  T++ ++ GY +A++
Sbjct: 746 AAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKK 785



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 184/397 (46%), Gaps = 8/397 (2%)

Query: 125 SIHSIMSQVEE----NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
           S HSI S++ +    +    D   +  +++++S  G  E A+  F KM ESGL+PT  TY
Sbjct: 188 SQHSIASKLFDVIPLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTY 247

Query: 181 NTLIKGYGIAGKP-EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           N ++  YG  G+   + + LLD M  +G +  +  T + ++ A   E  + EA      +
Sbjct: 248 NVMLDVYGKMGRSWNKILGLLDEMRSKG-LGFDEFTCSTVISACGREGLLDEAKEFFVGL 306

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
            + G  P  VTYN +   + + G   +A  ++ EME N   P+  T   +++ Y + G  
Sbjct: 307 KSQGYAPGTVTYNALLQVFGKAGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFY 366

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
           +E      TM E G+ PN V +  +I  +      D    +   MKE    P+V TY+ I
Sbjct: 367 EEGAALIDTMTENGIKPNAVTYTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAI 426

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +         ++  +I  DM   G  P+   ++ +      +   +  + +   M   GF
Sbjct: 427 LGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGMHKYVKRVFQEMKSCGF 486

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR-AE 478
            P+   F T+I+     GS   A +++D+M E G +P++ T+  L+   +  R  WR AE
Sbjct: 487 EPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNALLNALAR-RGDWRTAE 545

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
            +++ MK  G  P ++++ L+  +    G  K   RI
Sbjct: 546 SVIKDMKNKGFKPSETSYSLILNSYAKGGYVKGINRI 582



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 173/350 (49%), Gaps = 14/350 (4%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN----V 235
           Y T++  Y   GK E +V + + M+  G + P L TYNV++  +     +  +WN    +
Sbjct: 212 YTTILHSYSRCGKYERAVAIFEKMNESG-LSPTLVTYNVMLDVY---GKMGRSWNKILGL 267

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
           + +M + G+  D  T +T+ +A  + G  D+A+E  V ++  G  P   T   ++  + K
Sbjct: 268 LDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQGYAPGTVTYNALLQVFGK 327

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
            G   EAL   + M++    P+ V +N L+  +V     +    ++  M E  + P+ +T
Sbjct: 328 AGIYSEALSIMKEMEDNNCPPDAVTYNELVAAYVRAGFYEEGAALIDTMTENGIKPNAVT 387

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+T++NA+  A  +DK   ++D M ++G  P+   Y+ +     ++ + E+  ++L  M 
Sbjct: 388 YTTMINAYGRAAQVDKALSLYDQMKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMK 447

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIE-VFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
             G  PN + + T++S  C +  M + ++ VF +M   G  P+  TF TL+         
Sbjct: 448 VDGCAPNRITWNTMLS-MCGNKGMHKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSD 506

Query: 475 WRAEEILQIMKAFGVHPQKSTF--LLLAEARRATGLTKEAKRILSKIKNK 522
             AE+I   M   G  P  +T+  LL A ARR  G  + A+ ++  +KNK
Sbjct: 507 IDAEKIYDEMLEAGFTPSVATYNALLNALARR--GDWRTAESVIKDMKNK 554



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 66/238 (27%), Positives = 124/238 (52%), Gaps = 1/238 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + ++NS  + G  +    I  ++ +G   PS +   TL+ A    +    +      +
Sbjct: 562 SYSLILNSYAKGGYVKGINRIEKDIYDGHIFPSWMLLRTLILANFKCRALAGMERAFQAL 621

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +++G  PD + FN++++ FS     + A +    ++E GL P   TYN+L+  Y   G+ 
Sbjct: 622 QKHGYKPDLVVFNSMLSMFSRKNMHDRAHEIMHLIQECGLQPDLVTYNSLMDLYARGGEC 681

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ ++L  +   G+ K +L +YN +++ +C +  + EA   + +M + G++P +VTYNT
Sbjct: 682 WKAEEILRELQNSGD-KSDLISYNTVIKGFCRQGLMHEALRTLSEMISRGIRPCIVTYNT 740

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
               YA  G   + +EV+  M  +  +PN  T  I++ GYCK  K KEA+ F  T+ +
Sbjct: 741 FVGGYAAKGMFAEIDEVLSYMTKHDCRPNELTYKIVVDGYCKAKKFKEAMDFVSTITD 798



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/393 (21%), Positives = 184/393 (46%), Gaps = 45/393 (11%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C   V +   ++  L ++ + +E   I  ++   G  P+ +T+ T+L+    +  
Sbjct: 411 MKESGCAPNVCTYNAILGMLGKKSQSEEMMKILCDMKVDGCAPNRITWNTMLSMCGNKGM 470

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
              +  +  +++  G +PD   FN +I A    G+  +A   + +M E+G TP+ +TYN 
Sbjct: 471 HKYVKRVFQEMKSCGFEPDRDTFNTLITASGRCGSDIDAEKIYDEMLEAGFTPSVATYNA 530

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN----------EKNITE- 231
           L+      G    +  ++  M  +G  KP+  +Y++++ ++            EK+I + 
Sbjct: 531 LLNALARRGDWRTAESVIKDMKNKG-FKPSETSYSLILNSYAKGGYVKGINRIEKDIYDG 589

Query: 232 ----AWNVMHKM--------AASGM------------KPDVVTYNTIATAYAQNGEADQA 267
               +W ++  +        A +GM            KPD+V +N++ + +++    D+A
Sbjct: 590 HIFPSWMLLRTLILANFKCRALAGMERAFQALQKHGYKPDLVVFNSMLSMFSRKNMHDRA 649

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
            E++  ++  G+QP+  T   ++  Y + G+  +A    R ++  G   +L+ +N +IKG
Sbjct: 650 HEIMHLIQECGLQPDLVTYNSLMDLYARGGECWKAEEILRELQNSGDKSDLISYNTVIKG 709

Query: 328 FVEIMDRDGV-DEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           F     R G+  E L  + E     + P ++TY+T +  ++  G   +  E+   M K  
Sbjct: 710 FC----RQGLMHEALRTLSEMISRGIRPCIVTYNTFVGGYAAKGMFAEIDEVLSYMTKHD 765

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
            +P+   Y I+  GY + ++ ++A + + T+ +
Sbjct: 766 CRPNELTYKIVVDGYCKAKKFKEAMDFVSTITD 798



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/169 (23%), Positives = 81/169 (47%), Gaps = 5/169 (2%)

Query: 359 IMNAWSTAGFMDKCKEIFD----DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           ++ A   +G  ++   +F+    ++G   +  D  A  ++A+   RE +   A +L   +
Sbjct: 141 VLKALDLSGDCERAILLFEWLVLNLGTGNVNLDNQAVELMARILGRESQHSIASKLFDVI 200

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
               +  +V  +TTI+  +   G  +RA+ +F+KM E G+SP L T+  ++  Y +  + 
Sbjct: 201 PLDDYSLDVRAYTTILHSYSRCGKYERAVAIFEKMNESGLSPTLVTYNVMLDVYGKMGRS 260

Query: 475 W-RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           W +   +L  M++ G+   + T   +  A    GL  EAK     +K++
Sbjct: 261 WNKILGLLDEMRSKGLGFDEFTCSTVISACGREGLLDEAKEFFVGLKSQ 309


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 214/414 (51%), Gaps = 4/414 (0%)

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK 169
           Y TL+A L   ++      ++  +  NG D   + +  +I+   +SG+++ A     KM 
Sbjct: 13  YNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMA 72

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
           ++G  P   TY  LI G   A +P ++++ +  M R G  +P+L TYN L+   C    +
Sbjct: 73  DAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSG-CEPDLVTYNSLIHGLCMANRM 131

Query: 230 TEAWNVMHK-MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
            +A  V+ + M  SG  PDVVTYNT  +   + G+ D+  E++ EM+  G+ P+  T   
Sbjct: 132 DDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCS 191

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           IISG CK  +I +A +  + M E G  P+ + +++++         D V+EVL  M +  
Sbjct: 192 IISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSG 251

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
                 TY+ +++A   AG ++     ++   +AG   + + ++       R  +   A+
Sbjct: 252 HYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAK 311

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS-PNLKTFETLMWG 467
            +L+ MIESG  PN++ +  +I G C  G++D A ++  KM + G   P++  F TL+ G
Sbjct: 312 NILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISG 371

Query: 468 YSEARQPWRAEEILQIMKAFGVH-PQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           + +A +  +A+++L+ MKA  +  P   T+  + + +   G  K+AK +L +++
Sbjct: 372 FCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQ 425



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 182/386 (47%), Gaps = 12/386 (3%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + T L++ L + G    AQA+   + + G  P++VTYT L+  L   +R +     +
Sbjct: 44  SVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTV 103

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK-MKESGLTPTTSTYNTLIKGYGI 189
            ++  +G +PD + +N++I+    +  M++A     + M ESG  P   TYNT I G   
Sbjct: 104 KRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCK 163

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           AGK ++ +++L+ M R G + P++ T+  ++   C    I +A+ V   M   G  PD +
Sbjct: 164 AGKLDKGLEMLEEMDR-GGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSL 222

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY+ +    ++    D  EEV+  M  +G      T   +I    + G I+ A       
Sbjct: 223 TYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQA 282

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDG----VDEVLALMKEFRVNPDVITYSTIMNAWST 365
            E G    +   N     F+  + R G       +L  M E    P++++Y+ +++    
Sbjct: 283 MEAGCVMEVYTHN----AFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCK 338

Query: 366 AGFMDKCKEIFDDMGKAG-IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH-PNV 423
           +G +D   ++   M  +G  KPD   ++ L  G+ +     +A++LL  M       P+V
Sbjct: 339 SGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDV 398

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKM 449
           V + T+I G    GS+ +A  + ++M
Sbjct: 399 VTYNTMIDGQSKFGSLKQAKLLLEEM 424



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 73/265 (27%), Positives = 120/265 (45%), Gaps = 1/265 (0%)

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           MA+   + D   YNT+     +  +   A E++  M  NG   +  T   +I G CK G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           +  A    + M + G  PN+V +  LI G  +        + +  M      PD++TY++
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 359 IMNAWSTAGFMDKCKEIFDD-MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           +++    A  MD    +  + M ++G  PD   Y+    G  +  + +K  E+L  M   
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRG 180

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  P+VV F +IISG C    +D A +VF  M E G  P+  T+  ++   S A +    
Sbjct: 181 GISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTV 240

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEA 502
           EE+L+ M   G +   +T+  L  A
Sbjct: 241 EEVLEHMVKSGHYALSATYAPLIHA 265



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 117/255 (45%), Gaps = 19/255 (7%)

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           I+N LI G  +        E+L +M     +  V+TY+T+++    +G +D  + +   M
Sbjct: 12  IYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKM 71

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
             AG  P+   Y+ L  G  + + P  A + +  M+ SG  P++V + ++I G C    M
Sbjct: 72  ADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRM 131

Query: 440 DRAIEVFDK-MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           D A  V  + M E G  P++ T+ T + G  +A +  +  E+L+ M   G+ P   TF  
Sbjct: 132 DDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCS 191

Query: 499 ----LAEARRATGLTKEAKRILSK------------IKNKERTNEMEAEEDIPVESLERL 542
               L +A R     +  K +L +            + N  R N ++  E++ +E + + 
Sbjct: 192 IISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEV-LEHMVKS 250

Query: 543 YHKEATTASYPNLLQ 557
            H  A +A+Y  L+ 
Sbjct: 251 GHY-ALSATYAPLIH 264


>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
          Length = 472

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 109/388 (28%), Positives = 193/388 (49%), Gaps = 7/388 (1%)

Query: 88  PQEAQAIFNNLIEGGHKPSLV-----TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS 142
           P  A A+FN        P ++     TY  L+   T   R     +   Q+   G+  D+
Sbjct: 53  PALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDA 112

Query: 143 IFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           I  + ++  F E+   +EA+D    +  E G  P   +YN L+K     GK  ++  LL 
Sbjct: 113 IIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLR 172

Query: 202 LMSREGNV-KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
           +M+  G V  P++  YN ++  +  E ++ +A ++  +M   G+ PD+VTYN++  A  +
Sbjct: 173 MMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCK 232

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
               D+AE  + +M +  V PN  T   +I GY   G+ KEA+R  + M+ + + P++V 
Sbjct: 233 ARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVT 292

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
            ++L+    +        +V   M     NPDV +Y+ ++N ++T G +    ++FD M 
Sbjct: 293 LSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLML 352

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             GI PD + +++  K Y      +KA  +   M + G  P+VV + T+I+  C  G MD
Sbjct: 353 GDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 412

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            A+E F++M + GV+P+   +  L+ G+
Sbjct: 413 DAMEKFNQMIDQGVAPDKYAYNCLIQGF 440



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 182/380 (47%), Gaps = 2/380 (0%)

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P S  +  +++  + +   E A+  F ++  +GL       + L+KG+  A + +E++
Sbjct: 73  LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 132

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG--MKPDVVTYNTIA 255
            +L   + E    P++ +YN+L+++ CN+    +A N++  MA  G    PDVV YNT+ 
Sbjct: 133 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVI 192

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + + G+ ++A ++  EM   G+ P+  T   ++   CK   + +A  F R M    V 
Sbjct: 193 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 252

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN   +N LI G+           V   M+   + PDV+T S +M +    G + + +++
Sbjct: 253 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 312

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           FD M   G  PD  +Y+I+  GY  +       +L   M+  G  P+   F   I  + +
Sbjct: 313 FDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYAN 372

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G +D+A+ +F++M +HGV P++ T+ T++       +   A E    M   GV P K  
Sbjct: 373 CGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYA 432

Query: 496 FLLLAEARRATGLTKEAKRI 515
           +  L +     G+  + + I
Sbjct: 433 YNCLIQGFCTHGILLKTQGI 452



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/329 (26%), Positives = 150/329 (45%), Gaps = 38/329 (11%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH--KPSLVTYTTLLAALTIQKRFNSIHSI 129
           V S   L+ SL  +GK  +A  +   + EGG    P +V Y T++     +   N    +
Sbjct: 148 VFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDL 207

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ + G+ PD + +N+V++A  ++  M++A     +M    + P   TYN LI GY  
Sbjct: 208 FKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSS 267

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+ +E+V++   M R  ++ P++ T ++L+ + C    I EA +V   MA  G  PDV 
Sbjct: 268 TGQWKEAVRVFKEMRRH-SILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 326

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +YN +   YA  G      ++   M  +G+ P+  T  + I  Y   G + +A+     M
Sbjct: 327 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEM 386

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +++GV P                                   DV+TY T++ A    G M
Sbjct: 387 RDHGVKP-----------------------------------DVVTYRTVIAALCRIGKM 411

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           D   E F+ M   G+ PD +AY+ L +G+
Sbjct: 412 DDAMEKFNQMIDQGVAPDKYAYNCLIQGF 440



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 71/279 (25%), Positives = 142/279 (50%), Gaps = 8/279 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++   + G   +A  +F  +++ G  P LVTY +++ AL   +  +   + + 
Sbjct: 185 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLR 244

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+    + P++  +N +I  +S +G  +EA+  F +M+   + P   T + L+      G
Sbjct: 245 QMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYG 304

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E+  + D M+ +G   P++ +YN+++  +  +  + +  ++   M   G+ PD  T+
Sbjct: 305 KIKEARDVFDTMAMKGQ-NPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTF 363

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N    AYA  G  D+A  +  EM  +GV+P+  T   +I+  C+ GK+ +A+     M +
Sbjct: 364 NVQIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMID 423

Query: 312 YGVHPNLVIFNLLIKGFVE---IMDRDGVD----EVLAL 343
            GV P+   +N LI+GF     ++   G+D    E++AL
Sbjct: 424 QGVAPDKYAYNCLIQGFCTHGILLKTQGIDFGNNEIMAL 462



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/247 (24%), Positives = 112/247 (45%), Gaps = 3/247 (1%)

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD-GV 337
           + P   T  I++    +  + + AL F   +   G+  + +I + L+KGF E    D  +
Sbjct: 73  LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 132

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG--IKPDAHAYSILA 395
           D +L    E    PDV +Y+ ++ +    G   +   +   M + G    PD  AY+ + 
Sbjct: 133 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVI 192

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G+ +E +  KA +L   M++ G  P++V + +++   C   +MD+A     +M    V 
Sbjct: 193 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVL 252

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           PN  T+  L++GYS   Q   A  + + M+   + P   T  +L  +    G  KEA+ +
Sbjct: 253 PNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDV 312

Query: 516 LSKIKNK 522
              +  K
Sbjct: 313 FDTMAMK 319



 Score = 45.4 bits (106), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 23/110 (20%), Positives = 51/110 (46%), Gaps = 1/110 (0%)

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
           G   + P ++ Y+IL     R   PE A      ++ +G   + +I + ++ G+C     
Sbjct: 69  GPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRT 128

Query: 440 DRAIEV-FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           D A+++   +  E G  P++ ++  L+       +  +A+ +L++M   G
Sbjct: 129 DEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGG 178


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 108/431 (25%), Positives = 201/431 (46%), Gaps = 1/431 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L+  L + G+       +N+++  G  P+  TY  LL +L   +RF    S+   +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P+   ++ +I        ++EA +   +M + G  P   TY +L+ G    GK 
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+V L   M   G   P+   YNVL+  +  + ++ EA+ +  +M   G  P V TYN+
Sbjct: 139 KEAVDLFSRMVYRG-CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           + + +++ GE  + + +  +M   G  PN  T   ++ G+CK G + EA R    M+  G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P++V +N LI+G            +L  M    V PD+++Y+ +++ +S +G +D   
Sbjct: 258 CPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           ++F ++ K+G++PDA +YS +     R  +   A  +   MI +G  P+  +   ++ G 
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C    +  + E+F  M +    P +  +  LM+   +A++     EI   +   G  P  
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437

Query: 494 STFLLLAEARR 504
               ++ E  R
Sbjct: 438 EISKVILETLR 448



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 191/403 (47%), Gaps = 37/403 (9%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  + C   V S + L+  L    K  EA  + N +I+GGH+P++VTY +LL+ L    +
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 + S++   G  PD + +N +I+ FS+ G+M EA   F +M E G  PT  TYN+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ G+   G+      L   M R+G V PN+ T+N L+  +C   ++ EA  +  +M + 
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCV-PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  PDVV+YNT+       G+  +A+ ++ EM  +GV P+  +  I+I GY K G +  A
Sbjct: 257 GCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                                 IK F EI  + G++            PD  +YSTI++ 
Sbjct: 317 ----------------------IKLFYEI-PKSGLE------------PDAFSYSTIIDC 341

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              AG +     +F DM   G  PDA     L  G  R +   ++ EL   M++    P 
Sbjct: 342 LCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPL 401

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +  +  ++   C     D   E+F ++ E G SP+++  + ++
Sbjct: 402 IPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL 444



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/441 (24%), Positives = 202/441 (45%), Gaps = 2/441 (0%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           ++Y  LL  L    R + ++   + +   G  P++  +  ++ +  ++   EEA   F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M   G +P   +Y+ LI G     K +E+ +LL+ M  +G  +PN+ TY  L+   C   
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI-DGGHQPNVVTYGSLLSGLCKMG 136

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
            + EA ++  +M   G  PD V YN +   +++ G+  +A  +  EM   G  P   T  
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
            ++SG+ ++G+        + M   G  PN+  FN L+ GF ++ D      +   M+  
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
              PDV++Y+T++    + G   + + +  +M ++G+ PD  +Y+IL  GY +    + A
Sbjct: 257 GCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            +L   + +SG  P+   ++TII   C  G +  A  VF  M  +G +P+      L+ G
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNE 527
                +   + E+ Q M  F   P    + LL         + +   I  ++  +  + +
Sbjct: 377 LCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436

Query: 528 MEAEEDIPVESLERLYHKEAT 548
           +E  + I +E+L R   K+A 
Sbjct: 437 VEISKVI-LETLRRSDDKDAA 456



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 196/391 (50%), Gaps = 5/391 (1%)

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           SQV  N     ++ +N ++   ++SG  +    T+  M  +G  P T TY  L++    A
Sbjct: 9   SQVHYN---HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQA 65

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + EE+  +   M+ +G   PN+ +Y++L+   C  + + EA  ++++M   G +P+VVT
Sbjct: 66  QRFEEARSVFRGMAAQG-CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVT 124

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y ++ +   + G+  +A ++   M + G  P+G    ++I G+ K+G + EA R    M 
Sbjct: 125 YGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEML 184

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G  P +  +N L+ GF    +   V  +   M      P++ T++ +++ +   G M 
Sbjct: 185 EKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMV 244

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +F +M   G  PD  +Y+ L +G   + +P +A+ LL  MI SG  P++V +  +I
Sbjct: 245 EAHRLFLEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILI 304

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+   G++D AI++F ++ + G+ P+  ++ T++     A +   A  + + M A G  
Sbjct: 305 DGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSA 364

Query: 491 PQKSTFL-LLAEARRATGLTKEAKRILSKIK 520
           P  +  + L+    R   LT+  +   + +K
Sbjct: 365 PDAAVVIPLVIGLCRGERLTESCELFQAMVK 395



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 55/268 (20%), Positives = 112/268 (41%), Gaps = 1/268 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L++    +G+    Q++F +++  G  P++ T+  LL            H + 
Sbjct: 191 TVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLF 250

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G  PD + +N +I      G   EA     +M  SG+ P   +YN LI GY  +
Sbjct: 251 LEMRSLGCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKS 310

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  + ++KL   + + G ++P+  +Y+ ++   C    +  A+ V   M A+G  PD   
Sbjct: 311 GALDHAIKLFYEIPKSG-LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAV 369

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
              +     +     ++ E+   M      P      +++   CK  +  +       + 
Sbjct: 370 VIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELT 429

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           E G  P++ I  ++++      D+D  +
Sbjct: 430 ERGFSPDVEISKVILETLRRSDDKDAAE 457



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 80/173 (46%)

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
           N   ++Y+ ++   + +G  D     ++DM  AG  P+ + Y  L +   + Q  E+A  
Sbjct: 14  NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARS 73

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +   M   G  PNV  ++ +I+G C    +D A E+ ++M + G  PN+ T+ +L+ G  
Sbjct: 74  VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +  +   A ++   M   G  P    + +L +     G   EA R+  ++  K
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 130/488 (26%), Positives = 222/488 (45%), Gaps = 38/488 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   L+N L +  K +EA  +   +   G  P+ VT TTL+  L    R +    ++ 
Sbjct: 33  IVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLE 92

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF-------------------------- 165
            +++ G D D + +  +I+ F  +GN++   + F                          
Sbjct: 93  AMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLG 152

Query: 166 -WK--------MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            WK        M E G+ P   TY  LI G    G+   ++ LL+LM  +G  +P+  TY
Sbjct: 153 QWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGE-EPSNVTY 211

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM-- 274
           NVL+   C E  + +A+ ++  M   G K DVVTYNT+       G+ D+A ++   M  
Sbjct: 212 NVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFD 271

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
             N ++PN  T  ++I G CKEG++ +A++  R M + G   NLV +N+L+ G ++    
Sbjct: 272 NENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKI 331

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
               E+   + +    P+  TYS +++ +     ++  K +F +M   G+ P    Y+ L
Sbjct: 332 KEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTL 391

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
                +E   E+A+ L   M  +   P+++ F T+I G    G      E+  KM E G+
Sbjct: 392 MASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGL 451

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            P+  TF TL+   S+  +   A+  L+ M A G  P    +  L +   + G T E   
Sbjct: 452 RPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIIN 511

Query: 515 ILSKIKNK 522
           +L ++  K
Sbjct: 512 LLHQMAAK 519



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 203/427 (47%), Gaps = 9/427 (2%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           M  ++  L   G   EA  +   +      P +V+Y TL+  L   K+      ++ ++E
Sbjct: 1   MNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G  P+S+    +++   + G M+EAM+    MK+ G       Y TLI G+   G  +
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
              +L D M  +G +  N+ TY+ LV   C      EA  V++ MA  G+ PDVVTY  +
Sbjct: 121 RGKELFDEMLGKG-ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGL 179

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                ++G A  A +++  M   G +P+  T  +++SG CKEG + +A +  R M E G 
Sbjct: 180 IDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGK 239

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN-----PDVITYSTIMNAWSTAGFM 369
             ++V +N L+KG     D+  VDE L L      N     P+V T++ ++      G +
Sbjct: 240 KADVVTYNTLMKGLC---DKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRL 296

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            K  +I   M K G   +   Y++L  G ++  + ++A EL   +++ GF PN   ++ +
Sbjct: 297 TKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSIL 356

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G+C    ++ A  +F +M  HG++P L  + TLM    +     +A+ + Q M     
Sbjct: 357 IDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANC 416

Query: 490 HPQKSTF 496
            P   +F
Sbjct: 417 EPDIISF 423



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/411 (26%), Positives = 200/411 (48%), Gaps = 1/411 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L   G+ +EA  + N + E G  P +VTYT L+  L    R      +++
Sbjct: 138 VVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLN 197

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + E G +P ++ +N +++   + G + +A      M E G      TYNTL+KG    G
Sbjct: 198 LMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKG 257

Query: 192 KPEESVKLLDLM-SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           K +E++KL + M   E  ++PN+ T+N+L+   C E  +T+A  +  KM   G   ++VT
Sbjct: 258 KVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVT 317

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +     + G+  +A E+  ++   G  PN  T  I+I G+CK   +  A      M+
Sbjct: 318 YNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMR 377

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            +G++P L  +N L+    +    +    +   M      PD+I+++T+++    AG   
Sbjct: 378 THGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQ 437

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             KE+   M + G++PDA  +S L     +  E ++A+  L  M+ SGF P+ +++ +++
Sbjct: 438 FVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLL 497

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            G  S G     I +  +M   G   + K   T++     + Q     E+L
Sbjct: 498 KGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQEVDVMELL 548



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 167/341 (48%), Gaps = 3/341 (0%)

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           N ++KG    G   E++ L+  M R+ +V P++ +YN L+   C  K + EA  ++ +M 
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRK-SVSPDIVSYNTLINGLCKAKKLKEAVGLLLEME 60

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
           A+G  P+ VT  T+     ++G  D+A E++  M+  G   +    G +ISG+C  G + 
Sbjct: 61  AAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLD 120

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
                   M   G+  N+V ++ L+ G   +      + VL  M E  ++PDV+TY+ ++
Sbjct: 121 RGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLI 180

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           +     G      ++ + M + G +P    Y++L  G  +E     A ++L  MIE G  
Sbjct: 181 DGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKK 240

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMC--EHGVSPNLKTFETLMWGYSEARQPWRAE 478
            +VV + T++ G C  G +D A+++F+ M   E+ + PN+ TF  L+ G  +  +  +A 
Sbjct: 241 ADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAV 300

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +I + M   G      T+ +L       G  KEA  +  ++
Sbjct: 301 KIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQV 341



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 82/311 (26%), Positives = 151/311 (48%), Gaps = 8/311 (2%)

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N++++  C    + EA  ++ +M    + PD+V+YNT+     +  +  +A  +++EME 
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G  PN  TC  ++ G CK+G++ EA+     MK+ G   ++V++  LI GF    + D 
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             E+   M    ++ +V+TYS +++     G   +   + + M + GI PD   Y+ L  
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  ++     A +LL  M+E G  P+ V +  ++SG C +G +  A ++   M E G   
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAF-----GVHPQKSTFLLLAEARRATGLTKE 511
           ++ T+ TLM G  +     + +E L++  +       + P   TF +L       G   +
Sbjct: 242 DVVTYNTLMKGLCD---KGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTK 298

Query: 512 AKRILSKIKNK 522
           A +I  K+  K
Sbjct: 299 AVKIHRKMVKK 309



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 177/417 (42%), Gaps = 56/417 (13%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV--EE 135
           L++ L + G   +A  I   +IE G K  +VTY TL+  L  + + +    + + +   E
Sbjct: 214 LLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNE 273

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           N ++P+   FN +I    + G + +A+    KM + G      TYN L+ G   AGK +E
Sbjct: 274 NCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKE 333

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +++L   +   G V PN  TY++L+  +C  + +  A  +  +M   G+ P +  YNT+ 
Sbjct: 334 AMELWKQVLDLGFV-PNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLM 392

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            +  + G  +QA+ +  EM +   +P+  +   +I G  K G  +        M E G+ 
Sbjct: 393 ASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLR 452

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P                                   D +T+ST++N  S  G +D+ K  
Sbjct: 453 P-----------------------------------DALTFSTLINRLSKLGELDEAKSA 477

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            + M  +G  PDA  Y  L KG   + +  +   LL  M   G   +  I +TI++  C 
Sbjct: 478 LERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC- 536

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
                 +I+  D M         +   T   G SE       E ++Q+ ++   HP+
Sbjct: 537 -----HSIQEVDVM---------ELLPTFFQGTSEGASISCNELLMQLHQS---HPK 576



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 110/229 (48%), Gaps = 1/229 (0%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           K SC  + +   L+   ++ GK +EA  ++  +++ G  P+  TY+ L+      +  N 
Sbjct: 309 KGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNI 368

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              +  ++  +G++P    +N ++ +  + G++E+A   F +M  +   P   ++NT+I 
Sbjct: 369 AKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMID 428

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G   AG   + VK L +   E  ++P+  T++ L+        + EA + + +M ASG  
Sbjct: 429 GTLKAGDF-QFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFT 487

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           PD + Y+++    +  G+  +   ++ +M   G   + +    I++  C
Sbjct: 488 PDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLC 536


>gi|15242557|ref|NP_195906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181167|sp|Q9LYZ9.1|PP362_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g02860
 gi|7413561|emb|CAB86040.1| putative protein [Arabidopsis thaliana]
 gi|332003145|gb|AED90528.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 133/526 (25%), Positives = 241/526 (45%), Gaps = 82/526 (15%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           V S T L+++    G+ +EA  +F  + E G KP+L+TY  +L     +   +N I S++
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLV 267

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++ +G+ PD+  +N +I         +EA   F +MK +G +    TYN L+  YG +
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKS 327

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +P+E++K+L+ M   G   P++ TYN L+ A+  +  + EA  + ++MA  G KPDV T
Sbjct: 328 HRPKEAMKVLNEMVLNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+ + + + G+ + A  +  EM + G +PN  T    I  Y   GK  E ++    + 
Sbjct: 387 YTTLLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEIN 446

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEFR--------------------- 348
             G+ P++V +N L+  F     ++G+D EV  + KE +                     
Sbjct: 447 VCGLSPDIVTWNTLLAVF----GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502

Query: 349 -----------------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
                            V PD+ TY+T++ A +  G  ++ +++  +M     KP+   Y
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562

Query: 392 SILAKGYVREQE------------------------------------PEKAEELLMTMI 415
             L   Y   +E                                    PE AE     + 
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE-AERAFSELK 621

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           E GF P++    +++S +     + +A  V D M E G +P++ T+ +LM+ +S +    
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           ++EEIL+ + A G+ P   ++  +  A       ++A RI S+++N
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRN 727



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 204/466 (43%), Gaps = 36/466 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   L+++    G   EA  + N + E G KP + TYTTLL+      +  S  SI 
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIF 407

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G  P+   FNA I  +   G   E M  F ++   GL+P   T+NTL+  +G  
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E   +   M R G V P   T+N L+ A+    +  +A  V  +M  +G+ PD+ T
Sbjct: 468 GMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI----------- 299
           YNT+  A A+ G  +Q+E+V+ EME    +PN  T   ++  Y    +I           
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586

Query: 300 ------------------------KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
                                    EA R    +KE G  P++   N ++  +       
Sbjct: 587 SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVA 646

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
             + VL  MKE    P + TY+++M   S +    K +EI  ++   GIKPD  +Y+ + 
Sbjct: 647 KANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
             Y R      A  +   M  SG  P+V+ + T I  + +D   + AI V   M +HG  
Sbjct: 707 YAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCR 766

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           PN  T+ +++ GY +  +   A+  ++ ++    H  K   L L E
Sbjct: 767 PNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLE 812



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 222/449 (49%), Gaps = 8/449 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L + G+   A  +FN L E G    + +YT+L++A     R+    ++  ++EE+G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
             P  I +N ++N F + G     + +   KMK  G+ P   TYNTLI         +E+
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            ++ + M   G     + TYN L+  +       EA  V+++M  +G  P +VTYN++ +
Sbjct: 299 AQVFEEMKAAGFSYDKV-TYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVTYNSLIS 357

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           AYA++G  D+A E+  +M   G +P+  T   ++SG+ + GK++ A+     M+  G  P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV---NPDVITYSTIMNAWSTAGFMDKCK 373
           N+  FN  IK +    +R    E++ +  E  V   +PD++T++T++  +   G   +  
Sbjct: 418 NICTFNAFIKMY---GNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F +M +AG  P+   ++ L   Y R    E+A  +   M+++G  P++  + T+++  
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G  +++ +V  +M +    PN  T+ +L+  Y+  ++      + + + +  + P+ 
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA 594

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK 522
                L        L  EA+R  S++K +
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKER 623



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/370 (21%), Positives = 163/370 (44%), Gaps = 3/370 (0%)

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           +SG ++  +   ++  +     T+S     +KG G   K + +++  D   ++ + +  L
Sbjct: 112 DSGQLDSVLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALRAFDWFMKQKDYQSML 171

Query: 214 --RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
                 +++     E  ++ A N+ + +   G   DV +Y ++ +A+A +G   +A  V 
Sbjct: 172 DNSVVAIIISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVF 231

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKI-KEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
            +ME +G +P   T  +I++ + K G    +       MK  G+ P+   +N LI     
Sbjct: 232 KKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKR 291

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
                   +V   MK    + D +TY+ +++ +  +    +  ++ ++M   G  P    
Sbjct: 292 GSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNGFSPSIVT 351

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ L   Y R+   ++A EL   M E G  P+V  +TT++SG+   G ++ A+ +F++M 
Sbjct: 352 YNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMR 411

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
             G  PN+ TF   +  Y    +     +I   +   G+ P   T+  L       G+  
Sbjct: 412 NAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDS 471

Query: 511 EAKRILSKIK 520
           E   +  ++K
Sbjct: 472 EVSGVFKEMK 481


>gi|388521091|gb|AFK48607.1| unknown [Medicago truncatula]
          Length = 506

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 225/460 (48%), Gaps = 46/460 (10%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A ++FN+L+      +   +  +L +L   K ++++ S+  Q+E  G++P+ + FN +IN
Sbjct: 52  AVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPNFVTFNILIN 111

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL----------- 199
            F + G +  A     K+ + G  P   T NT IKG+ + G+  +++             
Sbjct: 112 CFCQLGLIPFAFSVLAKILKMGYEPDIITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 171

Query: 200 ---------------------LDLMSR-EGN-VKPNLRTYNVLVRAWCNEKNITEAWNVM 236
                                L L+ R +G  V+ N   YN ++     +K++ +A+++ 
Sbjct: 172 DQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQLNAVMYNTVIDGMSKDKHVNDAFDLY 231

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
            +M A  + PDVVTY+ +   +   G+   A ++  +M    ++P+  T  I++ G+CKE
Sbjct: 232 SEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLFNKMILENIKPDVYTFNILVDGFCKE 291

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
           G++K+A      M    + PN+  FN L+ GF +         V A+M +  + P+V+TY
Sbjct: 292 GRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCKDRKMKEGKTVFAMMMKQGIKPNVVTY 351

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
            ++M+ +     ++K K+IF+ M + G+  + H+Y+I+  G+ + ++ +KA +L + M  
Sbjct: 352 CSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHSYNIMINGFCKIKKVDKAMKLFIEMHH 411

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
               P+VV + ++I G C  G +  A ++ ++M + G  PN+ T+ +++           
Sbjct: 412 KHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMHDRGQPPNIITYNSIL----------- 460

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
              +L  +K  G+ P   T  +L +    +G  + A+++ 
Sbjct: 461 -NALLTKLKDQGIQPNMHTDTILIKGLCQSGKLEAARKVF 499



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 92/422 (21%), Positives = 204/422 (48%), Gaps = 18/422 (4%)

Query: 117 LTIQKRFNSIHSIMSQVEENGMD-PDSIF--------------FNAVINAFSESGNMEEA 161
           + +QK F    SI +    N +D   S+F              FN ++ +  +S +    
Sbjct: 28  ILLQKNFIPYSSISTTFHSNDVDGAVSLFNSLLHQNPTLTAFEFNKILGSLVKSKHYHTV 87

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           +    +M+  G+ P   T+N LI  +   G    +  +L  + + G  +P++ T N  ++
Sbjct: 88  LSLSQQMEFEGINPNFVTFNILINCFCQLGLIPFAFSVLAKILKMG-YEPDIITLNTFIK 146

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
            +C +  I +A N   K+ A G   D V+Y T+     + GE   A +++  ++   VQ 
Sbjct: 147 GFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGETRAALQLLRRVDGKLVQL 206

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD-RDGVDEV 340
           N      +I G  K+  + +A      M    + P++V ++ LI+GF  +   +D +D  
Sbjct: 207 NAVMYNTVIDGMSKDKHVNDAFDLYSEMVAKRISPDVVTYSALIRGFFIVGKLKDAIDLF 266

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
             ++ E  + PDV T++ +++ +   G + K K + D M    IKP+   ++ L  G+ +
Sbjct: 267 NKMILE-NIKPDVYTFNILVDGFCKEGRLKKAKNVLDMMMIQDIKPNVSTFNTLVDGFCK 325

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
           +++ ++ + +   M++ G  PNVV + +++ G+C    +++A ++F+ M + GV+ N+ +
Sbjct: 326 DRKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKQVNKAKKIFNTMSQRGVTANVHS 385

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  ++ G+ + ++  +A ++   M    + P   T+  L +    +G    A ++++++ 
Sbjct: 386 YNIMINGFCKIKKVDKAMKLFIEMHHKHIIPDVVTYNSLIDGLCKSGKISYAFQLVNEMH 445

Query: 521 NK 522
           ++
Sbjct: 446 DR 447


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/437 (27%), Positives = 211/437 (48%), Gaps = 12/437 (2%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G  ++A   F  + +   KP++  Y  +L AL  + RF  I+ I S ++++GM+P+   +
Sbjct: 125 GSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTY 184

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++ A  ++  ++ A     +M   G  P   +Y TLI      GK +E+ +L      
Sbjct: 185 NILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL------ 238

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
             +  P++  YN L+   C E    EA+ ++ +M   G+ P+V++Y TI  A +  G  +
Sbjct: 239 AMSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVE 298

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            +  V+ +M   G  PN  T   +I G+  +G   EAL F   M   GV PN+V +N L+
Sbjct: 299 LSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALM 358

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            G   +  +  + + +++  +  +N   P+V TYS +++ ++ AG +D   E+++ M   
Sbjct: 359 HG---LCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITH 415

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G  P+  AY+ +     R     +A  L+  M      PN V F T I G C  G +D A
Sbjct: 416 GCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWA 475

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           I+VFD+M   G  PN  T+  L+    + R+   A  +++ M+  G+     T+  +   
Sbjct: 476 IKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYG 535

Query: 503 RRATGLTKEAKRILSKI 519
               G+  EA  +L K+
Sbjct: 536 YCCAGMLGEALELLGKM 552



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 207/456 (45%), Gaps = 39/456 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV+    ++++L++  + Q    I++N+ + G +P++ TY  LL AL    R +  H ++
Sbjct: 145 TVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRVDGAHKLL 204

Query: 131 SQVEENGMDPDSI------------------------------FFNAVINAFSESGNMEE 160
            ++   G DPD +                               +NA+IN   +    EE
Sbjct: 205 VEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFTPSVPVYNALINGVCKEYTFEE 264

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A     +M   G+ P   +Y T+I     AG  E S+ +L  M   G   PNL T+  L+
Sbjct: 265 AFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARG-CSPNLHTFTSLI 323

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           + +  +    EA +   +M   G+ P+VV YN +            A  V  +ME NG  
Sbjct: 324 KGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCC 383

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV-DE 339
           PN RT   +I GY K G +  A      M  +G HPN+V +  +    V+++ R+ + ++
Sbjct: 384 PNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCM----VDVLCRNSMFNQ 439

Query: 340 VLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              L++  +V    P+ +T++T +     +G +D   ++FD MG +G  P+   Y+ L  
Sbjct: 440 AYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLD 499

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
             ++++   +A  L+  M   G   N+V + TII G+C  G +  A+E+  KM   G  P
Sbjct: 500 SLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKP 559

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +  T   ++  Y +  +   A +++  + A   HP 
Sbjct: 560 DAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPD 595



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 204/428 (47%), Gaps = 6/428 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T L++SL + GK +EA+ +  +       PS+  Y  L+  +  +  F     ++ ++
Sbjct: 218 SYTTLISSLCKLGKVKEARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEM 272

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+DP+ I +  +INA S++GN+E ++    KM   G +P   T+ +LIKG+ + G  
Sbjct: 273 MNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGS 332

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E++   D M REG V PN+  YN L+   C+++++ +A +V ++M  +G  P+V TY+ 
Sbjct: 333 HEALDFWDRMIREG-VVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSA 391

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   YA+ G+ D A EV   M  +G  PN      ++   C+     +A      M+   
Sbjct: 392 LIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             PN V FN  IKG       D   +V   M      P+  TY+ ++++        +  
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +  DM   GI+ +   Y+ +  GY       +A ELL  M+  G  P+ +    +I  +
Sbjct: 512 GLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAY 571

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G ++ AI++ D++      P++  + +L+ G         A   L+ M + G+ P  
Sbjct: 572 CKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNV 631

Query: 494 STFLLLAE 501
           +T+ +L  
Sbjct: 632 ATWNVLVR 639



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 177/358 (49%), Gaps = 6/358 (1%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +  +I   +    M+       +MK  G++ +   + ++I  Y  AG  E+++K    M 
Sbjct: 79  YQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRAGSSEQALKTFYRM- 137

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           ++  VKP ++ YN ++ A  +E        +   M   GM+P+V TYN +  A  +N   
Sbjct: 138 QDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTYNILLKALCKNNRV 197

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           D A +++VEM   G  P+  +   +IS  CK GK+KEA   A +       P++ ++N L
Sbjct: 198 DGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEARELAMSFT-----PSVPVYNAL 252

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G  +    +   ++L  M    ++P+VI+Y+TI+NA S AG ++    +   M   G 
Sbjct: 253 INGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGC 312

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+ H ++ L KG+  +    +A +    MI  G  PNVV +  ++ G CS  S+  A+ 
Sbjct: 313 SPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVS 372

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           VF++M  +G  PN++T+  L+ GY++A     A E+   M   G HP    +  + + 
Sbjct: 373 VFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDV 430



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 182/402 (45%), Gaps = 36/402 (8%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           MNK     V S T ++N+L + G  + + A+   +   G  P+L T+T+L+    ++   
Sbjct: 273 MNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGS 332

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +       ++   G+ P+ + +NA+++      ++ +A+  F +M+ +G  P   TY+ L
Sbjct: 333 HEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSAL 392

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I GY  AG  + + ++ + M   G   PN+  Y  +V   C      +A+ ++  M    
Sbjct: 393 IDGYAKAGDLDGASEVWNWMITHG-CHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVEN 451

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             P+ VT+NT       +G  D A +V  +M ++G  PN  T   ++    K+ +  EA 
Sbjct: 452 CPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAF 511

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
              + M+  G+  NLV +N +I G+                                   
Sbjct: 512 GLVKDMEHRGIELNLVTYNTIIYGY----------------------------------- 536

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
             AG + +  E+   M   G KPDA   +I+   Y ++ +   A +L+  +    +HP++
Sbjct: 537 CCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDI 596

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           + +T++ISG C+   ++ AI    +M   G+SPN+ T+  L+
Sbjct: 597 IAYTSLISGICTHIGVEEAIVYLRRMLSEGISPNVATWNVLV 638



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 1/273 (0%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C  VR+ + L++   + G    A  ++N +I  G  P++V YT ++  L     FN  + 
Sbjct: 383 CPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYC 442

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++  ++     P+++ FN  I     SG ++ A+  F +M  SG  P T+TYN L+    
Sbjct: 443 LIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLL 502

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
              +  E+  L+  M   G ++ NL TYN ++  +C    + EA  ++ KM   G KPD 
Sbjct: 503 KDRRFGEAFGLVKDMEHRG-IELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDA 561

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           +T N +  AY + G+ + A +++  +      P+      +ISG C    ++EA+ + R 
Sbjct: 562 ITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRR 621

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           M   G+ PN+  +N+L++     M   G  + L
Sbjct: 622 MLSEGISPNVATWNVLVRHLFSNMGHSGAVQFL 654



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 80/348 (22%), Positives = 162/348 (46%), Gaps = 1/348 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T L+     +G   EA   ++ +I  G  P++V Y  L+  L  ++      S+ +
Sbjct: 316 LHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFN 375

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+E NG  P+   ++A+I+ ++++G+++ A + +  M   G  P    Y  ++       
Sbjct: 376 QMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNS 435

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              ++  L++ M  E N  PN  T+N  ++  C    +  A  V  +M  SG  P+  TY
Sbjct: 436 MFNQAYCLIENMQVE-NCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTY 494

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  +  ++    +A  ++ +MEH G++ N  T   II GYC  G + EAL     M  
Sbjct: 495 NELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVV 554

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P+ +  N++I  + +    +   +++  +   + +PD+I Y+++++   T   +++
Sbjct: 555 RGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEE 614

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
                  M   GI P+   +++L +          A + L  ++ SGF
Sbjct: 615 AIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGF 662



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/169 (25%), Positives = 79/169 (46%), Gaps = 1/169 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           +L++SL++  +  EA  +  ++   G + +LVTY T++              ++ ++   
Sbjct: 496 ELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVR 555

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  PD+I  N VI+A+ + G +  A+    ++      P    Y +LI G       EE+
Sbjct: 556 GTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEA 615

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           +  L  M  EG + PN+ T+NVLVR   +    + A   +  +  SG +
Sbjct: 616 IVYLRRMLSEG-ISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGFE 663


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 186/376 (49%), Gaps = 1/376 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A + FN ++     PS V +T LL ++   K ++++ S+ +Q++  G+ PD    N +I
Sbjct: 95  DALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILI 154

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N+F     +  A     K+ + G  P  +T+NTLI+G  + GK  E++ L D    EG  
Sbjct: 155 NSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG-F 213

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +P++ TY  L+   C   N + A  ++  M     +P+V+ YNTI  +  ++ +  +A  
Sbjct: 214 QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFN 273

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  EM   G+ P+  T   +I   C   + K        M    + PN+V+F+ ++    
Sbjct: 274 LFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALC 333

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +        +V+ +M +  V PDV+TY+ +M+       MD+  ++FD M   G  P+  
Sbjct: 334 KEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVR 393

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           +Y+IL  GY + Q  +KA  LL  M   G   + V + T+I G C  G +  AI +F +M
Sbjct: 394 SYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEM 453

Query: 450 CEHGVSPNLKTFETLM 465
              G  P+L T+  L+
Sbjct: 454 VASGQIPDLVTYRILL 469



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/384 (24%), Positives = 175/384 (45%), Gaps = 1/384 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++  L+NS     +   A ++   L++ G +P   T+ TL+  L ++ +      +  
Sbjct: 147 VYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFD 206

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +    G  PD + +  ++N   + GN   A+     M +    P    YNT+I       
Sbjct: 207 KTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDR 266

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  L   M  +G + P++ TYN L+ A CN         ++++M  S + P+VV +
Sbjct: 267 QVTEAFNLFSEMITKG-ISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVF 325

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +T+  A  + G    A +V+  M   GV+P+  T   ++ G+C   ++ EA++   TM  
Sbjct: 326 STVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVH 385

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PN+  +N+LI G+ +I   D    +L  M    +  D +TY+T+++     G +  
Sbjct: 386 KGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQH 445

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F +M  +G  PD   Y IL     +     +A  LL  +  S    +++++   I 
Sbjct: 446 AIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAID 505

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVS 455
           G C  G ++ A ++F  +   G +
Sbjct: 506 GMCRAGELEAARDLFSNLSCQGFA 529



 Score = 88.6 bits (218), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 52/228 (22%), Positives = 95/228 (41%)

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +++   K       L  +  M  +G+ P++   N+LI  F  +        VLA + +  
Sbjct: 118 LLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLG 177

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             PD  T++T++      G + +   +FD     G +PD   Y  L  G  +      A 
Sbjct: 178 CQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAI 237

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            LL +M++    PNV+ + TII   C D  +  A  +F +M   G+SP++ T+ +L+   
Sbjct: 238 RLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHAL 297

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
               +      +L  M    + P    F  + +A    G+   A  ++
Sbjct: 298 CNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVV 345



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 80/181 (44%)

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+ V F  L+    ++     V  +   M  F + PDV T + ++N++     +     +
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
              + K G +PD   ++ L +G   E +  +A  L    I  GF P+VV + T+++G C 
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G+   AI +   M +    PN+  + T++    + RQ   A  +   M   G+ P   T
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289

Query: 496 F 496
           +
Sbjct: 290 Y 290


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 103/384 (26%), Positives = 194/384 (50%), Gaps = 4/384 (1%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  PD I   A+I  F + G  + A      ++ESG     ++YN LI GY  +G+ EE+
Sbjct: 109 GKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVTSYNVLISGYCKSGEIEEA 168

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +++LD M     V PN  TY+ ++ + C+   + +A  V+ +   S   PDVVT   +  
Sbjct: 169 LRVLDRM----GVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLID 224

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A  +     QA ++  EM + G +P+  T  ++I G+CK G++ EA+RF + +  YG  P
Sbjct: 225 ATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQP 284

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +++  N++++            ++LA M      P V+T++ ++N     G + K   + 
Sbjct: 285 DVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVL 344

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           + M K G  P++ +++ L +G+   +  ++A E L  M+  G +P++V +  +++  C D
Sbjct: 345 EMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKD 404

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +D A+ +  ++   G SP+L ++ T++ G  +  +   A E+L+ M   G+ P   T 
Sbjct: 405 GKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITC 464

Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
             +       G  +EA +    +K
Sbjct: 465 TSVVGGLSREGKVREAMKFFHYLK 488



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/471 (24%), Positives = 216/471 (45%), Gaps = 37/471 (7%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           +  LI  G+ +E       +   G  P ++  T L+       R  +   IM  +EE+G 
Sbjct: 86  LRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGA 145

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
             D   +N +I+ + +SG +EEA+    +M   G++P  +TY+ ++      GK +++++
Sbjct: 146 VIDVTSYNVLISGYCKSGEIEEALRVLDRM---GVSPNAATYDAVLCSLCDRGKLKQAMQ 202

Query: 199 -------------------LLDLMSREGNV---------------KPNLRTYNVLVRAWC 224
                              L+D   +E  V               KP++ TYNVL++ +C
Sbjct: 203 VLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFC 262

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
               + EA   + K+ + G +PDV+++N I  +    G    A +++  M   G  P+  
Sbjct: 263 KGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVV 322

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T  I+I+  C++G + +AL     M ++G  PN   FN LI+GF      D   E L +M
Sbjct: 323 TFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIM 382

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
                 PD++TY+ ++ A    G +D    I   +   G  P   +Y+ +  G ++  + 
Sbjct: 383 VSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 442

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           E A ELL  M   G  P+++  T+++ G   +G +  A++ F  +    + PN   + ++
Sbjct: 443 ELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSI 502

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           + G  +++Q   A + L  M A G  P ++T+  L +     GL ++A ++
Sbjct: 503 ITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKL 553



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 188/377 (49%), Gaps = 1/377 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ SL +RGK ++A  +    ++    P +VT T L+ A   +        + +++   G
Sbjct: 187 VLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKG 246

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + +N +I  F + G ++EA+    K+   G  P   ++N +++     G+  +++
Sbjct: 247 CKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAM 306

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL  M R+G + P++ T+N+L+   C +  + +A NV+  M   G  P+  ++N +   
Sbjct: 307 KLLATMLRKGCL-PSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQG 365

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           +      D+A E +  M   G  P+  T  I+++  CK+GK+ +A+     +   G  P+
Sbjct: 366 FCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPS 425

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           L+ +N +I G +++   +   E+L  M    + PD+IT ++++   S  G + +  + F 
Sbjct: 426 LISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFH 485

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            + +  I+P+A  Y+ +  G  + Q+   A + L  M+  G  P    +TT+I G   +G
Sbjct: 486 YLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEG 545

Query: 438 SMDRAIEVFDKMCEHGV 454
             + A ++ +++   G+
Sbjct: 546 LAEDASKLSNELYSRGL 562



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 116/257 (45%), Gaps = 3/257 (1%)

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +NGE ++    +  M + G  P+   C  +I  +CK G+ K A +    ++E G   ++ 
Sbjct: 91  RNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQIMGILEESGAVIDVT 150

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            +N+LI G+ +  +   ++E L ++    V+P+  TY  ++ +    G + +  ++    
Sbjct: 151 SYNVLISGYCKSGE---IEEALRVLDRMGVSPNAATYDAVLCSLCDRGKLKQAMQVLGRQ 207

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            ++   PD    ++L     +E    +A +L   M   G  P+VV +  +I G+C  G +
Sbjct: 208 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVTYNVLIKGFCKGGRL 267

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D AI    K+  +G  P++ +   ++       +   A ++L  M   G  P   TF +L
Sbjct: 268 DEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCLPSVVTFNIL 327

Query: 500 AEARRATGLTKEAKRIL 516
                  GL  +A  +L
Sbjct: 328 INFLCQKGLLGKALNVL 344



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 68/140 (48%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   +++ L++ GK + A  +   +   G KP L+T T+++  L+ + +          +
Sbjct: 428 SYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYL 487

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +   + P++  +N++I    +S     A+D    M   G  PT +TY TLIKG    G  
Sbjct: 488 KRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLA 547

Query: 194 EESVKLLDLMSREGNVKPNL 213
           E++ KL + +   G VK +L
Sbjct: 548 EDASKLSNELYSRGLVKRSL 567


>gi|218184813|gb|EEC67240.1| hypothetical protein OsI_34171 [Oryza sativa Indica Group]
          Length = 458

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 105/382 (27%), Positives = 192/382 (50%), Gaps = 6/382 (1%)

Query: 83  IERGKPQEAQAIFNNLIEGGHK---PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           + R  P  A ++FN +   G     P L TY+ L+       R +   + +  V + G  
Sbjct: 68  VARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFR 127

Query: 140 PDSIFFNAVINAFSESGNMEEAMD-TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            ++I F  ++          +AMD    +M E    P   +   L+KG     + +E+++
Sbjct: 128 VEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALE 187

Query: 199 LLDLMS--REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           LL +M+  R G   P++ +Y  ++  +  E +  +A++  H+M    + P+VVTY++I  
Sbjct: 188 LLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIA 247

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A  +    D+A EV+  M  NGV P+  T   I+ GYC  G+ KE +     M+  GV P
Sbjct: 248 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEP 307

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N+V +  L+    +        ++   M +  + PD+ TY T++  ++T G + +   + 
Sbjct: 308 NVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 367

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           D M + GI+PD H ++IL   Y ++++ ++A  +   M + G +PNVV + T+I   C  
Sbjct: 368 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 427

Query: 437 GSMDRAIEVFDKMCEHGVSPNL 458
           GS+D A+  F++M + G++PN+
Sbjct: 428 GSVDDAMLYFEQMIDEGLTPNI 449



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 159/334 (47%), Gaps = 6/334 (1%)

Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V L + M+R G   V P+L TY++L+   C    +   +  +  +   G + + +T
Sbjct: 73  PAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAIT 132

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +      +     A ++++  M      P+  +C I++ G C E + +EAL     M
Sbjct: 133 FAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMM 192

Query: 310 KE---YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
            +    G  P++V +  +I GF +  D D        M   R++P+V+TYS+I+ A   A
Sbjct: 193 ADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKA 252

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             MDK  E+ + M K G+ PD   YS +  GY    +P++    L  M   G  PNVV +
Sbjct: 253 QAMDKAMEVLNTMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTY 312

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            ++++  C +G   +A ++FD M + G+ P++ T+ TL+ GY+          +L +M  
Sbjct: 313 RSLMNYLCKNGRCTKARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVR 372

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            G+ P    F +L  A        +A  + SK++
Sbjct: 373 NGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR 406



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 64/249 (25%), Positives = 138/249 (55%), Gaps = 1/249 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N   + G   +A + ++ ++     P++VTY++++AAL   +  +    +++
Sbjct: 204 VVSYTTVINGFFKEGDSDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLN 263

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +NG+ PD + ++++++ +  SG  +E + T  KM+  G+ P   TY +L+      G
Sbjct: 264 TMVKNGVMPDCMTYSSILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNG 323

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  ++ K+ D M++ G ++P++ TY  L++ +  +  + E   ++  M  +G++PD   +
Sbjct: 324 RCTKARKIFDSMTKRG-LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF 382

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  AYA+  + DQA  V  +M  +G+ PN    G +I   CK G + +A+ +   M +
Sbjct: 383 NILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMID 442

Query: 312 YGVHPNLVI 320
            G+ PN+++
Sbjct: 443 EGLTPNIIL 451



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 159/379 (41%), Gaps = 73/379 (19%)

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           S+ + M++   + + PD   ++ +I     +G ++        + + G      T+  L+
Sbjct: 78  SLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLL 137

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA---A 241
           KG     +  +++ ++     E +  P++ +  +L++  C+E    EA  ++H MA    
Sbjct: 138 KGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRG 197

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G  PDVV+Y T+                                   I+G+ KEG   +
Sbjct: 198 GGSPPDVVSYTTV-----------------------------------INGFFKEGDSDK 222

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A      M    + PN+V ++ +I    +    D   EVL  M +  V PD +TYS+I++
Sbjct: 223 AYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSSILH 282

Query: 362 AWSTAG--------------------------FMD---------KCKEIFDDMGKAGIKP 386
            + ++G                           M+         K ++IFD M K G++P
Sbjct: 283 GYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKRGLEP 342

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   Y  L +GY  +    +   LL  M+ +G  P+  +F  +I  +     +D+A+ VF
Sbjct: 343 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 402

Query: 447 DKMCEHGVSPNLKTFETLM 465
            KM +HG++PN+  + T++
Sbjct: 403 SKMRQHGLNPNVVCYGTVI 421



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/299 (25%), Positives = 134/299 (44%), Gaps = 10/299 (3%)

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG---VQPNGRTCGI 288
           A +V+ ++   G    + ++N   T  A++  A  A  +   M   G   V P+  T  I
Sbjct: 42  ARHVLDELPLRGWGASIYSFNRTLTDVARDSPA-AAVSLFNRMARAGADEVTPDLCTYSI 100

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV-EIMDRDGVDEVLALMKEF 347
           +I   C+ G++         + + G     + F  L+KG   +    D +D VL  M E 
Sbjct: 101 LIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTEL 160

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIF----DDMGKAGIKPDAHAYSILAKGYVREQE 403
              PDV + + ++          +  E+     DD G  G  PD  +Y+ +  G+ +E +
Sbjct: 161 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRG-GGSPPDVVSYTTVINGFFKEGD 219

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            +KA      M+     PNVV +++II+  C   +MD+A+EV + M ++GV P+  T+ +
Sbjct: 220 SDKAYSTYHEMLGRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYSS 279

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           ++ GY  + QP      L  M++ GV P   T+  L       G   +A++I   +  +
Sbjct: 280 ILHGYCSSGQPKEDIGTLNKMRSDGVEPNVVTYRSLMNYLCKNGRCTKARKIFDSMTKR 338


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 225/448 (50%), Gaps = 7/448 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            V +   L+N L   G+  EA A+ N ++  G    +VTY T++  +       S  +++
Sbjct: 9   VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 68

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S++EE  + PD + ++A+I+   + G+  +A   F +M E G+ P   TYN +I G+   
Sbjct: 69  SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 128

Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           G+  ++ +LL D++ RE  + P++ T+N L+ A   E  + EA  +  +M    + PD V
Sbjct: 129 GRWSDAQRLLRDMIERE--INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 186

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN++   + ++   D A+ +   M      P+  T   II  YC+  ++ E ++  R +
Sbjct: 187 TYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 242

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G+  N   +N LI GF E+ + +   ++   M    V PD IT + ++  +     +
Sbjct: 243 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 302

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           ++  E+F+ +  + I  D  AY+I+  G  +  + ++A +L  ++   G  P+V  +  +
Sbjct: 303 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 362

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           ISG+C   ++  A  +F KM ++G  P+  T+ TL+ G  +A +  ++ E++  M++ G 
Sbjct: 363 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 422

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILS 517
                T  ++A+      L K    +LS
Sbjct: 423 SGDAFTIKMVADLITDGRLDKSFSDMLS 450



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/427 (23%), Positives = 211/427 (49%), Gaps = 11/427 (2%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           ++E G  P ++T+ TL+  L ++ R     ++++++   G+  D + +  ++N   + G+
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
            + A++   KM+E+ + P    Y+ +I      G   ++  L   M  +G + PN+ TYN
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG-IAPNVFTYN 119

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++  +C+    ++A  ++  M    + PDV+T+N + +A  + G+  +AE++  EM H 
Sbjct: 120 CMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 179

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
            + P+  T   +I G+CK  +  +A    + M +    P++V FN +I  +        V
Sbjct: 180 CIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTIIDVYCR---AKRV 232

Query: 338 DEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           DE + L++E     +  +  TY+T+++ +     ++  +++F +M   G+ PD    +IL
Sbjct: 233 DEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNIL 292

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G+   ++ E+A EL   +  S    + V +  II G C    +D A ++F  +  HGV
Sbjct: 293 LYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGV 352

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            P+++T+  ++ G+        A  +   MK  G  P  ST+  L       G   ++  
Sbjct: 353 EPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIE 412

Query: 515 ILSKIKN 521
           ++S++++
Sbjct: 413 LISEMRS 419



 Score = 79.7 bits (195), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 48/179 (26%), Positives = 88/179 (49%)

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M E  + P VIT++T++N     G + +   + + M   G+  D   Y  +  G  +  +
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            + A  LL  M E+   P+VVI++ II   C DG    A  +F +M E G++PN+ T+  
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           ++ G+    +   A+ +L+ M    ++P   TF  L  A    G   EA+++  ++ ++
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHR 179


>gi|297806221|ref|XP_002870994.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316831|gb|EFH47253.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 819

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 132/526 (25%), Positives = 242/526 (46%), Gaps = 82/526 (15%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           V S T L+++    G+ +EA  +F  + E G KP+L+TY  +L     +   +N I S++
Sbjct: 208 VYSYTSLISAFANSGRYREAVNVFKKMEEEGCKPTLITYNVILNVFGKMGTPWNKITSLV 267

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++ +G+ PD+  +N +I         +EA   F +MK +G +    TYN L+  YG +
Sbjct: 268 EKMKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKS 327

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +P+E++K+L+ M   G   P++ TYN L+ A+  +  + EA  + ++MA  G KPDV T
Sbjct: 328 HRPKEAMKVLNEMELNG-FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFT 386

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+ + + + G+ + A  +  EM + G +PN  T    I  Y   GK  + ++    + 
Sbjct: 387 YTTLLSGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEIN 446

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEFR--------------------- 348
             G+ P++V +N L+  F     ++G+D EV  + KE +                     
Sbjct: 447 VCGLSPDIVTWNTLLAVF----GQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRC 502

Query: 349 -----------------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
                            V PD+ TY+T++ A +  G  ++ +++  +M     KP+   Y
Sbjct: 503 GSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTY 562

Query: 392 SILAKGYVREQE------------------------------------PEKAEELLMTMI 415
             L   Y   +E                                    PE AE     + 
Sbjct: 563 CSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPE-AERAFSELK 621

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           E GF P++    +++S +     + +A EV D M E G +P++ T+ +LM+ +S +    
Sbjct: 622 ERGFSPDITTLNSMVSIYGRRQMVGKANEVLDYMKERGFTPSMATYNSLMYMHSRSADFG 681

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           ++EEIL+ + A G+ P   ++  +  A       ++A RI S++++
Sbjct: 682 KSEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRD 727



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 206/466 (44%), Gaps = 36/466 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   L+++    G   EA  + N + E G KP + TYTTLL+      +  S  +I 
Sbjct: 348 SIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIF 407

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G  P+   FNA I  +   G   + M  F ++   GL+P   T+NTL+  +G  
Sbjct: 408 EEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQN 467

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E   +   M R G V P   T+N L+ A+    +  +A  V  +M  +G+ PD+ T
Sbjct: 468 GMDSEVSGVFKEMKRAGFV-PERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLST 526

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI----------- 299
           YNT+  A A+ G  +Q+E+V+ EME    +PN  T   ++  Y    +I           
Sbjct: 527 YNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVY 586

Query: 300 ------------------------KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
                                    EA R    +KE G  P++   N ++  +       
Sbjct: 587 SGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITTLNSMVSIYGRRQMVG 646

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
             +EVL  MKE    P + TY+++M   S +    K +EI  ++   GIKPD  +Y+ + 
Sbjct: 647 KANEVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREILAKGIKPDIISYNTVI 706

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
             Y R      A  +   M +SG  P+V+ + T I  + +D   + AI V   M +HG  
Sbjct: 707 YAYCRNTRMRDASRIFSEMRDSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMIKHGCR 766

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           PN  T+ +++ GY +  +   A+  ++ ++    H  K   L L E
Sbjct: 767 PNQNTYNSIVDGYCKLNRKDEAKLFVEDLRNLDPHAPKGEDLRLLE 812



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 221/449 (49%), Gaps = 8/449 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L + G+   A  +FN L E G    + +YT+L++A     R+    ++  ++EE G
Sbjct: 179 VISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEEG 238

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
             P  I +N ++N F + G     + +   KMK  G+ P   TYNTLI         +E+
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            ++ + M   G     + TYN L+  +       EA  V+++M  +G  P +VTYN++ +
Sbjct: 299 AQVFEEMKAAGFSHDKV-TYNALLDVYGKSHRPKEAMKVLNEMELNGFSPSIVTYNSLIS 357

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           AYA++G  D+A E+  +M   G +P+  T   ++SG+ + GK++ A+     M+  G  P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMNIFEEMRNAGCKP 417

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV---NPDVITYSTIMNAWSTAGFMDKCK 373
           N+  FN  IK +    +R    +++ +  E  V   +PD++T++T++  +   G   +  
Sbjct: 418 NICTFNAFIKMY---GNRGKFVDMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVS 474

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F +M +AG  P+   ++ L   Y R    E+A  +   M+++G  P++  + T+++  
Sbjct: 475 GVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAAL 534

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G  +++ +V  +M +    PN  T+ +L+  Y+  ++      + + + +  + P+ 
Sbjct: 535 ARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRA 594

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK 522
                L        L  EA+R  S++K +
Sbjct: 595 VLLKTLVLVCSKCDLLPEAERAFSELKER 623



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 224/469 (47%), Gaps = 26/469 (5%)

Query: 77  KLMNSLIERG-KPQEAQAIFNNLIEGGHKPSLVTYTTLLA---ALTIQKRFN----SIHS 128
           +++ SLIE      +  A+ + L E        T + LLA    L   K+F+    +   
Sbjct: 101 QVLRSLIEPNFDSGQLDALLSELFEPFKDKPESTSSELLAFLKGLGFHKKFDLALCAFDW 160

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
            M Q +   M  +S+    VI+   + G +  A + F  ++E G +    +Y +LI  + 
Sbjct: 161 FMKQKDYQSMLDNSVI-AIVISMLGKEGRVSSAANLFNGLQEDGFSLDVYSYTSLISAFA 219

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN----VMHKMAASGM 244
            +G+  E+V +   M  EG  KP L TYNV++  +     +   WN    ++ KM + G+
Sbjct: 220 NSGRYREAVNVFKKMEEEG-CKPTLITYNVILNVF---GKMGTPWNKITSLVEKMKSDGI 275

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            PD  TYNT+ T   +     +A +V  EM+  G   +  T   ++  Y K  + KEA++
Sbjct: 276 APDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSHDKVTYNALLDVYGKSHRPKEAMK 335

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLAL---MKEFRVNPDVITYSTIM 360
               M+  G  P++V +N LI  +     RDG +DE + L   M E    PDV TY+T++
Sbjct: 336 VLNEMELNGFSPSIVTYNSLISAYA----RDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           + +  AG ++    IF++M  AG KP+   ++   K Y    +     ++   +   G  
Sbjct: 392 SGFERAGKVESAMNIFEEMRNAGCKPNICTFNAFIKMYGNRGKFVDMMKIFDEINVCGLS 451

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P++V + T+++ +  +G       VF +M   G  P  +TF TL+  YS      +A  +
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN-KERTNEM 528
            + M   GV P  ST+  +  A    G+ ++++++L+++++ + + NE+
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNEL 560


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 225/448 (50%), Gaps = 7/448 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            V +   L+N L   G+  EA A+ N ++  G    +VTY T++  +       S  +++
Sbjct: 220 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 279

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S++EE  + PD + ++A+I+   + G+  +A   F +M E G+ P   TYN +I G+   
Sbjct: 280 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 339

Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           G+  ++ +LL D++ RE  + P++ T+N L+ A   E  + EA  +  +M    + PD V
Sbjct: 340 GRWSDAQRLLRDMIERE--INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 397

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN++   + ++   D A+ +   M      P+  T   II  YC+  ++ E ++  R +
Sbjct: 398 TYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 453

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G+  N   +N LI GF E+ + +   ++   M    V PD IT + ++  +     +
Sbjct: 454 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 513

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           ++  E+F+ +  + I  D  AY+I+  G  +  + ++A +L  ++   G  P+V  +  +
Sbjct: 514 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 573

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           ISG+C   ++  A  +F KM ++G  P+  T+ TL+ G  +A +  ++ E++  M++ G 
Sbjct: 574 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGF 633

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILS 517
                T  ++A+      L K    +LS
Sbjct: 634 SGDAFTIKMVADLITDGRLDKSFSDMLS 661



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 193/414 (46%), Gaps = 30/414 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   L+    +  K   + + F  L + G +P +VT+ TLL  L ++ R +       
Sbjct: 141 IYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISE------ 194

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
                              A +  G M E    F +M E GLTP   T+NTLI G  + G
Sbjct: 195 -------------------ALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEG 235

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  L++ M  +G +  ++ TY  +V   C   +   A N++ KM  + +KPDVV Y
Sbjct: 236 RVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 294

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + I     ++G    A+ +  EM   G+ PN  T   +I G+C  G+  +A R  R M E
Sbjct: 295 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 354

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             ++P+++ FN LI   V+       +++   M    + PD +TY++++  +      D 
Sbjct: 355 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 414

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            K +FD M      PD   ++ +   Y R +  ++  +LL  +   G   N   + T+I 
Sbjct: 415 AKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIH 470

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           G+C   +++ A ++F +M  HGV P+  T   L++G+ E  +   A E+ ++++
Sbjct: 471 GFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 524



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/439 (23%), Positives = 217/439 (49%), Gaps = 11/439 (2%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   E  ++F+ ++E G  P ++T+ TL+  L ++ R     ++++++   G+  D + +
Sbjct: 200 GYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 259

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             ++N   + G+ + A++   KM+E+ + P    Y+ +I      G   ++  L   M  
Sbjct: 260 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 319

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G + PN+ TYN ++  +C+    ++A  ++  M    + PDV+T+N + +A  + G+  
Sbjct: 320 KG-IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLF 378

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +AE++  EM H  + P+  T   +I G+CK  +  +A    + M +    P++V FN +I
Sbjct: 379 EAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPDVVTFNTII 434

Query: 326 KGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
             +        VDE + L++E     +  +  TY+T+++ +     ++  +++F +M   
Sbjct: 435 DVYCR---AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISH 491

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ PD    +IL  G+   ++ E+A EL   +  S    + V +  II G C    +D A
Sbjct: 492 GVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEA 551

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            ++F  +  HGV P+++T+  ++ G+        A  +   MK  G  P  ST+  L   
Sbjct: 552 WDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRG 611

Query: 503 RRATGLTKEAKRILSKIKN 521
               G   ++  ++S++++
Sbjct: 612 CLKAGEIDKSIELISEMRS 630



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 176/366 (48%), Gaps = 14/366 (3%)

Query: 140 PDSIF-FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           P +I+ FN +I  F +   +  ++ TF K+ + G  P   T+NTL+ G  +  +  E++ 
Sbjct: 138 PLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA 197

Query: 199 LLDLMSREGN---------VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           L   M   G+         + P + T+N L+   C E  + EA  +++KM   G+  DVV
Sbjct: 198 LFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVV 257

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY TI     + G+   A  ++ +ME   ++P+      II   CK+G   +A      M
Sbjct: 258 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 317

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            E G+ PN+  +N +I GF           +L  M E  +NPDV+T++ +++A    G +
Sbjct: 318 LEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKL 377

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            + +++ D+M    I PD   Y+ +  G+ +    + A+ +   M      P+VV F TI
Sbjct: 378 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTI 433

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I  +C    +D  +++  ++   G+  N  T+ TL+ G+ E      A+++ Q M + GV
Sbjct: 434 IDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGV 493

Query: 490 HPQKST 495
            P   T
Sbjct: 494 CPDTIT 499



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 88/376 (23%), Positives = 177/376 (47%), Gaps = 15/376 (3%)

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
           ++++A+D F  M  S    T    N +I  +    +P+ ++ L   M     +  N+ ++
Sbjct: 86  SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR-RIPLNIYSF 144

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT----------IATAYAQNGEADQ 266
           N+L++ +C+   ++ + +   K+   G +PDVVT+NT          I+ A A  G   +
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
              +  +M   G+ P   T   +I+G C EG++ EA      M   G+H ++V +  ++ 
Sbjct: 205 TGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 264

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           G  ++ D      +L+ M+E  + PDV+ YS I++     G     + +F +M + GI P
Sbjct: 265 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 324

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           +   Y+ +  G+        A+ LL  MIE   +P+V+ F  +IS    +G +  A ++ 
Sbjct: 325 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 384

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           D+M    + P+  T+ ++++G+ +  +   A+ +  +M +    P   TF  + +     
Sbjct: 385 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRA 440

Query: 507 GLTKEAKRILSKIKNK 522
               E  ++L +I  +
Sbjct: 441 KRVDEGMQLLREISRR 456



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/309 (24%), Positives = 137/309 (44%), Gaps = 16/309 (5%)

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           K++ +A +    M  S      V  N +   + +    D A  +  +ME   +  N  + 
Sbjct: 85  KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL--- 343
            I+I  +C   K+  +L     + + G  P++V FN L+ G       D + E LAL   
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCL---EDRISEALALFGY 201

Query: 344 ----------MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
                     M E  + P VIT++T++N     G + +   + + M   G+  D   Y  
Sbjct: 202 MVETGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 261

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           +  G  +  + + A  LL  M E+   P+VVI++ II   C DG    A  +F +M E G
Sbjct: 262 IVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKG 321

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           ++PN+ T+  ++ G+    +   A+ +L+ M    ++P   TF  L  A    G   EA+
Sbjct: 322 IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAE 381

Query: 514 RILSKIKNK 522
           ++  ++ ++
Sbjct: 382 KLCDEMLHR 390


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 189/381 (49%), Gaps = 3/381 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M+ +    +P  A      +++ G +P LVT+T+LL       R     ++  Q+   G
Sbjct: 124 VMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG 183

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + +  +I    ++ ++  A++ F +M  +G  P   TYN L+ G    G+  ++ 
Sbjct: 184 FKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAA 243

Query: 198 KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            LL D+M R   ++PN+ T+  L+ A+     + EA  + + M    + PDV TY ++  
Sbjct: 244 WLLRDMMKRR--IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLIN 301

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
                G  D+A ++   ME NG  PN      +I G+CK  ++++ ++    M + GV  
Sbjct: 302 GLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVA 361

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N + + +LI+G+  +   D   EV   M   R  PD+ TY+ +++     G ++K   IF
Sbjct: 362 NTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIF 421

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           + M K  +  +   Y+I+ +G  +  + E A +L  ++   G  PNV+ +TT+ISG+C  
Sbjct: 422 EYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRR 481

Query: 437 GSMDRAIEVFDKMCEHGVSPN 457
           G +  A  +F KM E G  PN
Sbjct: 482 GLIHEADSLFKKMKEDGFLPN 502



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/472 (23%), Positives = 223/472 (47%), Gaps = 4/472 (0%)

Query: 49  SKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLV 108
           S P  +   + C FC      R   S  K++ + +   +  +A  +F  ++     PS++
Sbjct: 28  SNPRTAASLSLCGFCF---WIRAFSSYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSII 84

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
            +T LL+ +    R++ + S+  Q++  G+ P     N V++    S     A     KM
Sbjct: 85  DFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKM 144

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
            + G  P   T+ +L+ GY    + E+++ L D +   G  KPN+ TY  L+R  C  ++
Sbjct: 145 MKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMG-FKPNVVTYTTLIRCLCKNRH 203

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           +  A  + ++M  +G +P+VVTYN + T   + G    A  ++ +M    ++PN  T   
Sbjct: 204 LNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTA 263

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +I  + K GK+ EA      M +  V+P++  +  LI G       D   ++  LM+   
Sbjct: 264 LIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNG 323

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             P+ + Y+T+++ +  +  ++   +IF +M + G+  +   Y++L +GY     P+ A+
Sbjct: 324 CYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQ 383

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           E+   M      P++  +  ++ G C +G +++A+ +F+ M +  +  N+ T+  ++ G 
Sbjct: 384 EVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGM 443

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            +  +   A ++   + + G+ P   T+  +       GL  EA  +  K+K
Sbjct: 444 CKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMK 495



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 105/429 (24%), Positives = 196/429 (45%), Gaps = 8/429 (1%)

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           +A+D F +M  S   P+   +  L+       + +  + L + M   G + P L T N++
Sbjct: 66  DALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILG-IPPLLCTCNIV 124

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +   C       A   + KM   G +PD+VT+ ++   Y      + A  +  ++   G 
Sbjct: 125 MHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGF 184

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           +PN  T   +I   CK   +  A+     M   G  PN+V +N L+ G  EI        
Sbjct: 185 KPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAW 244

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +L  M + R+ P+VIT++ +++A+   G + + KE+++ M +  + PD   Y  L  G  
Sbjct: 245 LLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLC 304

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
                ++A ++   M  +G +PN VI+TT+I G+C    ++  +++F +M + GV  N  
Sbjct: 305 MYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTI 364

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+  L+ GY    +P  A+E+   M +    P   T+ +L +     G  ++A  I   +
Sbjct: 365 TYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYM 424

Query: 520 KNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLL---QIPNVVSSDQKGSAAALKKG 576
           + +E    +     I ++ + +L   E     + +L      PNV++     S    ++G
Sbjct: 425 RKREMDINI-VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC-RRG 482

Query: 577 RMLLRDADS 585
             L+ +ADS
Sbjct: 483 --LIHEADS 489



 Score = 40.4 bits (93), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 17/70 (24%), Positives = 41/70 (58%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T ++  + + GK ++A  +F +L   G KP+++TYTT+++    +   +   S+  
Sbjct: 433 IVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFK 492

Query: 132 QVEENGMDPD 141
           +++E+G  P+
Sbjct: 493 KMKEDGFLPN 502


>gi|356519757|ref|XP_003528536.1| PREDICTED: protein Rf1, mitochondrial-like [Glycine max]
          Length = 871

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 232/472 (49%), Gaps = 19/472 (4%)

Query: 42  KKQLYSNSKPTDSQPQTH-CSFC--------------MNKESCR-TVRSMTKLMNSLIER 85
           K  ++   +P++       C FC              M K  C   V +   L+N+    
Sbjct: 236 KDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIG 295

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+   A    + ++  G +PS+ T+TT+L AL  +        +   +++ G+ P++  +
Sbjct: 296 GRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIY 355

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMS 204
           N +++ + ++  + +A   + +M+ +G++P   T+N L+ G+   G+ E+S +LL DL+ 
Sbjct: 356 NTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIV 415

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
               +  +L  Y+V+V + C    + EA  ++ ++   G+   VV +N++  AY++ G  
Sbjct: 416 SGLFLDSSL--YDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLE 473

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           D+A E    M   G  P+  TC  ++ G C++G ++EA      M E G   N V + +L
Sbjct: 474 DKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVL 533

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           + G+ ++ + +G   +   MKE  + PD + ++ +++  S AG +++  E+F +M   G 
Sbjct: 534 LDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGF 593

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+  AY+ L +G        +A +L   M + G   +   F  II G+C  G M  AIE
Sbjct: 594 VPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIE 653

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            F  M   G+ P++ TF  L+ GY +A     A EI+  M + G+ P  +T+
Sbjct: 654 TFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTY 705



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 192/392 (48%), Gaps = 2/392 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+ +++  +  +LI  G       Y  ++++L    R +    ++ ++ E G+    + F
Sbjct: 401 GRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAF 460

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N++I A+S +G  ++A + +  M   G TP++ST N+L+ G    G  +E+  LL  M  
Sbjct: 461 NSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLE 520

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G    N   Y VL+  +    N+  A  +  +M   G+ PD V +  +    ++ G  +
Sbjct: 521 KG-FPINKVAYTVLLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVE 579

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A EV +EM   G  PN      +I G C  G++ EAL+  + M++ G+  +   FN++I
Sbjct: 580 EAYEVFLEMSAIGFVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIII 639

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF          E    M+   + PD+ T++ ++  +  A  M    EI + M   G+ 
Sbjct: 640 DGFCRRGQMKFAIETFLDMQRIGLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLD 699

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   Y+    GY R ++  +A  +L  +I +G  P+ V + T++SG CSD  +DRA+ +
Sbjct: 700 PDITTYNTYMHGYCRMRKMNQAVIILDQLISAGIVPDTVTYNTMLSGICSD-ILDRAMIL 758

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
             K+ + G  PN+ T   L+  + +   P +A
Sbjct: 759 TAKLLKMGFIPNVITTNMLLSHFCKQGMPEKA 790



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 207/451 (45%), Gaps = 7/451 (1%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           +  L+   +  G   EA  +   +   G +P L + T LL  L     + S+  +   + 
Sbjct: 180 LNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLFKDMI 239

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G  P ++ FNA+I  F     +         M +   +P   T+N LI    I G+  
Sbjct: 240 FKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIGGRTW 299

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            ++  L LM R G V+P++ T+  ++ A C E N+ EA  +   +   G+ P+   YNT+
Sbjct: 300 VAIDWLHLMVRSG-VEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIYNTL 358

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              Y +  E  QA  +  EM   GV P+  T  I++ G+ K G+I+++ R  + +   G+
Sbjct: 359 MDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIVSGL 418

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDK 371
             +  ++++++           +DE + L++E     +   V+ +++++ A+S AG  DK
Sbjct: 419 FLDSSLYDVMVSSLCW---AGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGLEDK 475

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E +  M + G  P +   + L  G  R+   ++A  LL  M+E GF  N V +T ++ 
Sbjct: 476 AFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLD 535

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+    +++ A  ++ +M E G+ P+   F  L+ G S+A     A E+   M A G  P
Sbjct: 536 GYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVP 595

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
               +  L       G   EA ++  +++ K
Sbjct: 596 NNFAYNSLIRGLCDCGRVTEALKLEKEMRQK 626



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 198/419 (47%), Gaps = 1/419 (0%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +F ++I  G +PS +T+  ++     Q R     S++  + +    PD + FN +INA  
Sbjct: 234 LFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACC 293

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
             G    A+D    M  SG+ P+ +T+ T++      G   E+ KL D +   G + PN 
Sbjct: 294 IGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMG-IAPNA 352

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
             YN L+  +   + + +A  +  +M  +G+ PD VT+N +   + + G  + ++ ++ +
Sbjct: 353 AIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKD 412

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           +  +G+  +     +++S  C  G++ EA++  + + E G+  ++V FN LI  +     
Sbjct: 413 LIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVAFNSLIGAYSRAGL 472

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            D   E   +M      P   T ++++      G++ + + +   M + G   +  AY++
Sbjct: 473 EDKAFEAYRIMVRCGFTPSSSTCNSLLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTV 532

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L  GY +    E A+ L   M E G +P+ V FT +I G    G+++ A EVF +M   G
Sbjct: 533 LLDGYFKMNNLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIG 592

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
             PN   + +L+ G  +  +   A ++ + M+  G+     TF ++ +     G  K A
Sbjct: 593 FVPNNFAYNSLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFA 651



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/386 (22%), Positives = 167/386 (43%), Gaps = 49/386 (12%)

Query: 155 SGNMEEAMDTFWK---MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP 211
           +G   + +D  W+   M ES      S  NTL++G+   G   E++++L +M   G V+P
Sbjct: 156 TGRTNKIVDFMWRNHAMYESDF----SVLNTLLRGFLNVGMGFEALEVLRMMRGVG-VRP 210

Query: 212 NLR-----------------------------------TYNVLVRAWCNEKNITEAWNVM 236
            L                                    T+N ++  +C +  +    +++
Sbjct: 211 GLSSITILLRLLLRIGDYGSVWKLFKDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLL 270

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
           H M      PDVVT+N +  A    G    A + +  M  +GV+P+  T   I+   C+E
Sbjct: 271 HLMPKFMCSPDVVTFNILINACCIGGRTWVAIDWLHLMVRSGVEPSVATFTTILHALCRE 330

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
           G + EA +    +++ G+ PN  I+N L+ G+ +  +      +   M+   V+PD +T+
Sbjct: 331 GNVVEARKLFDGIQDMGIAPNAAIYNTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTF 390

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           + ++      G ++    +  D+  +G+  D+  Y ++          ++A +LL  ++E
Sbjct: 391 NILVWGHYKYGRIEDSDRLLKDLIVSGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLE 450

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G   +VV F ++I  +   G  D+A E +  M   G +P+  T  +L+ G    R+ W 
Sbjct: 451 KGLTLSVVAFNSLIGAYSRAGLEDKAFEAYRIMVRCGFTPSSSTCNSLLMGL--CRKGWL 508

Query: 477 AEEILQIM----KAFGVHPQKSTFLL 498
            E  + +     K F ++    T LL
Sbjct: 509 QEARILLYRMLEKGFPINKVAYTVLL 534



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/400 (21%), Positives = 166/400 (41%), Gaps = 82/400 (20%)

Query: 2   GKFAEGKAFLQTDDKYQSGSTIVKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCS 61
           G+  E    LQ  +  + G T+    +  +I A      E K   +       +    C 
Sbjct: 436 GRLDEAMKLLQ--ELLEKGLTLSVVAFNSLIGAYSRAGLEDKAFEA------YRIMVRCG 487

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F  +  +C +      L+  L  +G  QEA+ +   ++E G   + V YT LL       
Sbjct: 488 FTPSSSTCNS------LLMGLCRKGWLQEARILLYRMLEKGFPINKVAYTVLLDGYFKMN 541

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
                  +  +++E G+ PD++ F A+I+  S++GN+EEA + F +M   G  P    YN
Sbjct: 542 NLEGAQFLWKEMKERGIYPDAVAFTALIDGLSKAGNVEEAYEVFLEMSAIGFVPNNFAYN 601

Query: 182 TLIKGYGIAGKPEESVKL-------------------LDLMSREGNVK------------ 210
           +LI+G    G+  E++KL                   +D   R G +K            
Sbjct: 602 SLIRGLCDCGRVTEALKLEKEMRQKGLLSDTFTFNIIIDGFCRRGQMKFAIETFLDMQRI 661

Query: 211 ---PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
              P++ T+N+L+  +C   ++  A  +++KM + G+ PD+ TYNT    Y +  + +QA
Sbjct: 662 GLLPDIFTFNILIGGYCKAFDMVGAGEIVNKMYSCGLDPDITTYNTYMHGYCRMRKMNQA 721

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISG----------------------------------Y 293
             ++ ++   G+ P+  T   ++SG                                  +
Sbjct: 722 VIILDQLISAGIVPDTVTYNTMLSGICSDILDRAMILTAKLLKMGFIPNVITTNMLLSHF 781

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           CK+G  ++AL + + ++E     + + + +L + +  + D
Sbjct: 782 CKQGMPEKALIWGQKLREISFGFDEISYRILDQAYCLMQD 821



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 131/284 (46%)

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           D    NT+   +   G   +A EV+  M   GV+P   +  I++    + G      +  
Sbjct: 176 DFSVLNTLLRGFLNVGMGFEALEVLRMMRGVGVRPGLSSITILLRLLLRIGDYGSVWKLF 235

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
           + M   G  P+ + FN +I GF         + +L LM +F  +PDV+T++ ++NA    
Sbjct: 236 KDMIFKGPRPSNLTFNAMICGFCRQHRVVVGESLLHLMPKFMCSPDVVTFNILINACCIG 295

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G      +    M ++G++P    ++ +     RE    +A +L   + + G  PN  I+
Sbjct: 296 GRTWVAIDWLHLMVRSGVEPSVATFTTILHALCREGNVVEARKLFDGIQDMGIAPNAAIY 355

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            T++ G+     + +A  ++++M   GVSP+  TF  L+WG+ +  +   ++ +L+ +  
Sbjct: 356 NTLMDGYFKAREVAQASLLYEEMRTTGVSPDCVTFNILVWGHYKYGRIEDSDRLLKDLIV 415

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEA 530
            G+    S + ++  +    G   EA ++L ++  K  T  + A
Sbjct: 416 SGLFLDSSLYDVMVSSLCWAGRLDEAMKLLQELLEKGLTLSVVA 459


>gi|356577532|ref|XP_003556878.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 932

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 228/492 (46%), Gaps = 39/492 (7%)

Query: 53  DSQPQTHCSFCMNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYT 111
           D +   HC   M +E    T+ + + ++    + G    A   F    E     + V Y 
Sbjct: 334 DMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFEEAKEKLPSLNAVIYG 393

Query: 112 TLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES 171
            ++ A       +   +++ ++EE G+D     ++ +++ ++  GN E+ +  F ++KE 
Sbjct: 394 GIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKEC 453

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE 231
           G  P+  +Y  LI  Y   GK  +++++  +M   G +K N++TY++L+  +   K+   
Sbjct: 454 GFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSG-IKHNMKTYSMLINGFLKLKDWAN 512

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           A++V       G+KPDVV YN I TA+   G  D+A  ++ +M+    +P  RT   II 
Sbjct: 513 AFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRPTTRTFLPIIH 572

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
           G+ + G+++ AL     M+  G  P +  +N LI G VE         +L  M    V P
Sbjct: 573 GFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAILDEMNVAGVGP 632

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH---------------------- 389
           +  TY+T+M  +++ G  +K  + F  +   G++ D +                      
Sbjct: 633 NEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVT 692

Query: 390 -------------AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
                         Y+IL  G+ R  +  +A +L+  M + G  P++  +T+ I+  C  
Sbjct: 693 KEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGLLPDIHTYTSFINACCKA 752

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G M +A E+  +M   G+ PNLKT+ TL+ G++ A  P +A    + MK  G  P K+ +
Sbjct: 753 GDMQKATEIIQEMEASGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAGFKPDKAVY 812

Query: 497 --LLLAEARRAT 506
             L+ +   RAT
Sbjct: 813 HCLVTSLLSRAT 824



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 201/436 (46%), Gaps = 2/436 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           +P+  QA+     E   KP+   Y  ++     +   +        +   G++P S  ++
Sbjct: 265 QPENWQAVVTAF-ERIKKPARKEYGLMVKYYGRRGDMHHARQTFESMRARGIEPSSHVYS 323

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           ++I+A++   +MEEA+    KMKE G+  T  TY+ ++ G+   G  + +    +  ++E
Sbjct: 324 SLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGNADAADHWFE-EAKE 382

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
                N   Y  ++ A C   N+  A  ++ +M   G+   +  Y+T+   Y   G  ++
Sbjct: 383 KLPSLNAVIYGGIIYAHCQICNMDRAEALVREMEEQGIDAPIDIYHTMMDGYTMIGNEEK 442

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
              V   ++  G  P+  + G +I+ Y K GK+ +AL  ++ MK  G+  N+  +++LI 
Sbjct: 443 CLIVFDRLKECGFFPSVISYGCLINLYTKVGKVSKALEISKMMKMSGIKHNMKTYSMLIN 502

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GF+++ D      V     +  + PDV+ Y+ I+ A+   G MD+   +   M K   +P
Sbjct: 503 GFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIITAFCGMGNMDRAICMVRQMQKERHRP 562

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
               +  +  G+ R  E  +A E+   M  SG  P V  +  +I G      M +A+ + 
Sbjct: 563 TTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRQMTKAVAIL 622

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           D+M   GV PN  T+ TLM GY+      +A +   +++  G+     T+  L ++   +
Sbjct: 623 DEMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYFTVLRNEGLEIDVYTYEALLKSCCKS 682

Query: 507 GLTKEAKRILSKIKNK 522
           G  + A  +  ++  K
Sbjct: 683 GRMQSALAVTKEMSAK 698


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 236/524 (45%), Gaps = 70/524 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++     G+  +A  +  ++      P   TY T+L  L I K++     +M+
Sbjct: 158 VVTYTALIDGYCRSGRLDDALRLIASMPVA---PDTYTYNTVLKGLCIAKKWEEAEELMA 214

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  N   P+ + F   I +F ++G ++ A+    +M   G TP    Y+TLI G+   G
Sbjct: 215 EMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQG 274

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++++ LL+ M      KPN   YN  ++  C  +   +   +M +M   G  P+  T+
Sbjct: 275 HVDQALDLLNTML----CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATF 330

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + + ++  QN   D A EV+ +ME  G +P+     III+   + G++ +ALR   +M  
Sbjct: 331 SMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV- 389

Query: 312 YGVHPNLVIFNLLIKGF-------------------------------VEIMDRDGV--- 337
               P+ + FN ++KGF                               ++++ ++G+   
Sbjct: 390 --CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNY 447

Query: 338 -DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             +V   M  +R  PD++TYS+++N +S  G ++   ++F  M     KPD  +Y+ + K
Sbjct: 448 ATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLK 504

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  R    E A EL+  M+     PN V F  +I+  C  G +DRAIEV ++M  +G +P
Sbjct: 505 GLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTP 564

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           ++ T+  L+ G+SE     R ++ L+++      P   ++                    
Sbjct: 565 DIFTYNALINGFSEQ---GRLDDALKLLSTMSCKPDAISY-------------------N 602

Query: 517 SKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPN 560
           S +K   R    +  E++  E L         T  Y N L +PN
Sbjct: 603 STLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPN 646



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/363 (26%), Positives = 174/363 (47%), Gaps = 11/363 (3%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           V++ TL+A      R      ++      G   + + + A+I+ +  SG +++A+     
Sbjct: 125 VSHNTLVAGYCRDGRLADAERVLGAARATGA-ANVVTYTALIDGYCRSGRLDDALRLIAS 183

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M    + P T TYNT++KG  IA K EE+ +L+  M R     PN  T+   +R++C   
Sbjct: 184 MP---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIR-NRCPPNEVTFATQIRSFCQNG 239

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
            +  A  ++ +M   G  PDVV Y+T+   +++ G  DQA +++  M     +PN     
Sbjct: 240 LLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYN 296

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
             + G C   + ++       M   G  PN   F++LI    +    D   EVL  M+++
Sbjct: 297 AALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKY 356

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
              PD + Y+ I+N+ S  G +D    + + M     KPDA  ++ + KG+ R +    A
Sbjct: 357 GCEPDTVNYNIIINSLSERGRVDDALRLLNSM---VCKPDALGFNAVLKGFCRAERWHDA 413

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            EL+  M         + F  +I   C +G ++ A +VF++M  +  +P++ T+ +L+ G
Sbjct: 414 SELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNG 473

Query: 468 YSE 470
           +SE
Sbjct: 474 FSE 476



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 154/341 (45%), Gaps = 11/341 (3%)

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           ++NTL+ GY   G+  ++ ++L      G    N+ TY  L+  +C    + +A  ++  
Sbjct: 126 SHNTLVAGYCRDGRLADAERVLGAARATG--AANVVTYTALIDGYCRSGRLDDALRLIAS 183

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  +   PD  TYNT+        + ++AEE++ EM  N   PN  T    I  +C+ G 
Sbjct: 184 MPVA---PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           +  A++    M  YG  P++VI++ LI GF E   +  VD+ L L+      P+ + Y+ 
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSE---QGHVDQALDLLNTMLCKPNTVCYNA 297

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
            +     A   +   E+  +M + G  P+   +S+L     +    + A E+L  M + G
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P+ V +  II+     G +D A+ + + M      P+   F  ++ G+  A +   A 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDAS 414

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           E++  M        + TF +L +     GL   A ++  ++
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQM 455



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 104/204 (50%), Gaps = 13/204 (6%)

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG----VDEV 340
           +C I+I   C   ++ +A R    +K      + V  N L+ G+     RDG     + V
Sbjct: 92  SCNILIKKLCATRRLADAERVLDALKAAAAA-DAVSHNTLVAGYC----RDGRLADAERV 146

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L   +      +V+TY+ +++ +  +G +D    +   M    + PD + Y+ + KG   
Sbjct: 147 LGAARATGA-ANVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCI 202

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
            ++ E+AEEL+  MI +   PN V F T I  +C +G +DRA+++ D+M  +G +P++  
Sbjct: 203 AKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVI 262

Query: 461 FETLMWGYSEARQPWRAEEILQIM 484
           + TL+ G+SE     +A ++L  M
Sbjct: 263 YSTLINGFSEQGHVDQALDLLNTM 286


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 115/456 (25%), Positives = 215/456 (47%), Gaps = 8/456 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH--KPSLVTYTTLLAALTIQKRFNSIHSI 129
           V S   L+ SL  +GK  +A  +   + EGG    P +V Y T++     +   N    +
Sbjct: 184 VFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDL 243

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ + G+ PD + +++V++A  ++  M++A     +M   G+ P   TYN LI GY  
Sbjct: 244 FKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSS 303

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+ +E+V++   M R+ ++ P++   N L+ + C    I EA +V   MA  G  PDV 
Sbjct: 304 TGQWKEAVRVFKEMRRQ-SILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 362

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +Y  +   YA  G      ++   M  +G+ P   T  ++I  Y   G + +A+     M
Sbjct: 363 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 422

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +++GV P++V +  +I     I   D   E    M +  V PD   Y  ++  + T G +
Sbjct: 423 RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSL 482

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            K KE+  ++   G++ D   +  +     +      A+ +    +  G HP+ V++  +
Sbjct: 483 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 542

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+C  G M++A+ VFD M   G+ PN+  + TL+ GY +  +      + + M   G+
Sbjct: 543 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI 602

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
            P    + ++ +     GL +  + + +K+K  E T
Sbjct: 603 KPSTILYNIIID-----GLFEAGRTVPAKVKFHEMT 633



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 196/401 (48%), Gaps = 7/401 (1%)

Query: 88  PQEAQAIFNNLIEGGHKPSLV-----TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS 142
           P  A A+FN        P ++     TY  L+   T   R     +   Q+   G+  D+
Sbjct: 89  PALAVALFNRAASRAQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDA 148

Query: 143 IFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           I  + ++  F E+   +EA+D    +  E G  P   +YN L+K     GK  ++  LL 
Sbjct: 149 IIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLR 208

Query: 202 LMSREGNV-KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
           +M+  G V  P++  YN ++  +  E ++ +A ++  +M   G+ PD+VTY+++  A  +
Sbjct: 209 MMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCK 268

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
               D+AE  + +M + GV P+  T   +I GY   G+ KEA+R  + M+   + P++V 
Sbjct: 269 ARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVA 328

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
            N L+    +        +V   M     NPDV +Y+ ++N ++T G +    ++FD M 
Sbjct: 329 LNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLML 388

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             GI P    +++L K Y      +KA  +   M + G  P+VV + T+I+  C  G MD
Sbjct: 389 GDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMD 448

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            A+E F++M + GV P+   +  L+ G+       +A+E++
Sbjct: 449 DAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELI 489



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/436 (24%), Positives = 208/436 (47%), Gaps = 1/436 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+ +EA  +F  +      P +V   TL+ +L    +      +   +   G +PD   +
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             ++N ++  G + +  D F  M   G+ P   T+N LIK Y   G  ++++ + + M R
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM-R 423

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +  VKP++ TY  ++ A C    + +A    ++M   G+ PD   Y+ +   +  +G   
Sbjct: 424 DHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLL 483

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A+E+I E+ +NG++ +    G II+  CK G++ +A          G+HP+ V++N+L+
Sbjct: 484 KAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLM 543

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G+  +   +    V   M    + P+V+ Y T++N +   G +D+   +F +M + GIK
Sbjct: 544 DGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIK 603

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P    Y+I+  G         A+     M ESG   N   ++ ++ G   +   D AI +
Sbjct: 604 PSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFL 663

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F ++    V  ++ T  T++ G  + R+   A+++   +   G+ P   T+ ++      
Sbjct: 664 FKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIK 723

Query: 506 TGLTKEAKRILSKIKN 521
            GL +EA+ + S ++N
Sbjct: 724 EGLVEEAEDMFSSMQN 739



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 212/483 (43%), Gaps = 36/483 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++   + G   +A  +F  +++ G  P LVTY++++ AL   +  +   + + 
Sbjct: 221 VVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLR 280

Query: 132 QVEENGMDPDSIFFNAVINAFSESGN---------------------------------- 157
           Q+   G+ PD+  +N +I  +S +G                                   
Sbjct: 281 QMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYG 340

Query: 158 -MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            ++EA D F  M   G  P   +Y  ++ GY   G   +   L DLM  +G + P + T+
Sbjct: 341 KIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDG-IAPVICTF 399

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           NVL++A+ N   + +A  + ++M   G+KP VVTY T+  A  + G+ D A E   +M  
Sbjct: 400 NVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMID 459

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            GV P+      +I G+C  G + +A      +   G+  ++V F  +I    ++     
Sbjct: 460 QGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMD 519

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              +  L     ++PD + Y+ +M+ +   G M+K   +FD M  AGI+P+   Y  L  
Sbjct: 520 AQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVN 579

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           GY +    ++   L   M++ G  P+ +++  II G    G    A   F +M E G++ 
Sbjct: 580 GYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAM 639

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N  T+  ++ G  + R    A  + + ++A  V     T   +      T   +EAK + 
Sbjct: 640 NKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLF 699

Query: 517 SKI 519
           + I
Sbjct: 700 ASI 702



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/424 (24%), Positives = 208/424 (49%), Gaps = 7/424 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++  LM SL + GK +EA+ +F+ +   G  P + +YT +L     +     +  +  
Sbjct: 326 VVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFD 385

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  +G+ P    FN +I A++  G +++AM  F +M++ G+ P   TY T+I      G
Sbjct: 386 LMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIG 445

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +++++  + M  +G V P+   Y+ L++ +C   ++ +A  ++ ++  +GM+ D+V +
Sbjct: 446 KMDDAMEKFNQMIDQG-VVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFF 504

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            +I     + G    A+ +     + G+ P+     +++ GYC  GK+++ALR    M  
Sbjct: 505 GSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVS 564

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            G+ PN+V +  L+ G+ +I     +DE L+L +E     + P  I Y+ I++    AG 
Sbjct: 565 AGIEPNVVGYGTLVNGYCKI---GRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGR 621

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
               K  F +M ++GI  +   YSI+ +G  + +  ++A  L   +       +++   T
Sbjct: 622 TVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNT 681

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I+G      ++ A ++F  +   G+ P   T+  ++    +      AE++   M+  G
Sbjct: 682 MIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAG 741

Query: 489 VHPQ 492
             P 
Sbjct: 742 CEPD 745



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 189/386 (48%), Gaps = 2/386 (0%)

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P S  +  +++  + +   E A+  F ++  +GL       + L+KG+  A + +E++
Sbjct: 109 LSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEAL 168

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG--MKPDVVTYNTIA 255
            +L   + E    P++ +YN+L+++ CN+    +A +++  MA  G    PDVV YNT+ 
Sbjct: 169 DILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVI 228

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + + G+ ++A ++  EM   G+ P+  T   ++   CK   + +A  F R M   GV 
Sbjct: 229 DGFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVL 288

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+   +N LI G+           V   M+   + PDV+  +T+M +    G + + +++
Sbjct: 289 PDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDV 348

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           FD M   G  PD  +Y+I+  GY  +       +L   M+  G  P +  F  +I  + +
Sbjct: 349 FDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYAN 408

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G +D+A+ +F++M +HGV P++ T+ T++       +   A E    M   GV P K  
Sbjct: 409 CGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYA 468

Query: 496 FLLLAEARRATGLTKEAKRILSKIKN 521
           +  L +     G   +AK ++S+I N
Sbjct: 469 YHCLIQGFCTHGSLLKAKELISEIMN 494



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 179/373 (47%), Gaps = 7/373 (1%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   +A  IFN + + G KP +VTY T++AAL    + +      +Q+ + G+ PD   +
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           + +I  F   G++ +A +   ++  +G+      + ++I      G+  ++  + DL   
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G + P+   YN+L+  +C    + +A  V   M ++G++P+VV Y T+   Y + G  D
Sbjct: 530 VG-LHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRID 588

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +   +  EM   G++P+     III G  + G+   A      M E G+  N   +++++
Sbjct: 589 EGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVL 648

Query: 326 KGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +G  +       DE + L KE R   V  D+IT +T++        +++ K++F  + ++
Sbjct: 649 RGLFK---NRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRS 705

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ P A  YSI+    ++E   E+AE++  +M  +G  P+  +   ++        + RA
Sbjct: 706 GLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRA 765

Query: 443 IEVFDKMCEHGVS 455
                K+ E   S
Sbjct: 766 GAYLSKIDERNFS 778



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/249 (23%), Positives = 123/249 (49%), Gaps = 1/249 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N+L + G+  +AQ IF+  +  G  P  V Y  L+    +  +      +   +   G
Sbjct: 507 IINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAG 566

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++P+ + +  ++N + + G ++E +  F +M + G+ P+T  YN +I G   AG+   + 
Sbjct: 567 IEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAK 626

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M+  G +  N  TY++++R     +   EA  +  ++ A  +K D++T NT+   
Sbjct: 627 VKFHEMTESG-IAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAG 685

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             Q    ++A+++   +  +G+ P   T  I+I+   KEG ++EA     +M+  G  P+
Sbjct: 686 MFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPD 745

Query: 318 LVIFNLLIK 326
             + N +++
Sbjct: 746 SRLLNHVVR 754



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 83/335 (24%), Positives = 144/335 (42%), Gaps = 29/335 (8%)

Query: 192 KPEESVKLLDLMSREGNVKPNL-RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           +PEE+  LLD + R G   P L R  N  + A     +           AA G  P    
Sbjct: 46  RPEEAHDLLDELQRRGT--PVLDRDLNGFLAALARAPS----------SAACGSGP---- 89

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
              +A A   N  A +A+   V      + P   T  I++    +  + + AL F   + 
Sbjct: 90  --ALAVALF-NRAASRAQGPRV------LSPTSYTYAILMDCCTRAHRPELALAFFGQLL 140

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRD-GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
             G+  + +I + L+KGF E    D  +D +L    E    PDV +Y+ ++ +    G  
Sbjct: 141 RTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKS 200

Query: 370 DKCKEIFDDMGKAG--IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +  ++   M + G    PD  AY+ +  G+ +E +  KA +L   M++ G  P++V ++
Sbjct: 201 GQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYS 260

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +++   C   +MD+A     +M   GV P+  T+  L++GYS   Q   A  + + M+  
Sbjct: 261 SVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQ 320

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            + P       L  +    G  KEA+ +   +  K
Sbjct: 321 SILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMK 355



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 59/263 (22%), Positives = 120/263 (45%), Gaps = 36/263 (13%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LM+     GK ++A  +F+ ++  G +P++V Y TL+       R +   S+  ++ + G
Sbjct: 542 LMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKG 601

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P +I +N +I+   E+G    A   F +M ESG+     TY+ +++G       +E++
Sbjct: 602 IKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAI 661

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   + R  NVK ++ T N ++      + + EA ++   ++ SG+ P  VTY+ + T 
Sbjct: 662 FLFKEL-RAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITN 720

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGR--------------------------------- 284
             + G  ++AE++   M++ G +P+ R                                 
Sbjct: 721 LIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLE 780

Query: 285 --TCGIIISGYCKEGKIKEALRF 305
             T  +++  +  +G  +E +RF
Sbjct: 781 HLTAMLLVDLFSSKGTCREQIRF 803



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/127 (18%), Positives = 53/127 (41%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  ++  + +  + +EA+ +F ++   G  P  VTY+ ++  L  +        + S +
Sbjct: 678 TLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSM 737

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +  G +PDS   N V+    +   +  A     K+ E   +    T   L+  +   G  
Sbjct: 738 QNAGCEPDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTC 797

Query: 194 EESVKLL 200
            E ++ L
Sbjct: 798 REQIRFL 804


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 122/474 (25%), Positives = 222/474 (46%), Gaps = 11/474 (2%)

Query: 48  NSKPTDSQPQTHCSFCMN--KESCRT-----VRSMTKLMNSLIERGKPQEAQAIFNNLIE 100
           N++  +  P T  + C+   +E         ++    ++ +L +  +  + ++++  +++
Sbjct: 165 NTRARNPAPSTCSTLCLAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQ 224

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN--GMDPDSIFFNAVINAFSESGNM 158
            G +PS+VTY TLL +   + R +    ++ ++E    G  P  + +N VIN  +  G +
Sbjct: 225 LGIEPSIVTYNTLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGEL 284

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
           E+A     +M+ S    +  T+N LI GY   G  E++  L   M  EG V P + TYN 
Sbjct: 285 EKAAQLVDRMRMSK-KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIV-PTVVTYNT 342

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           ++       N+  A     +M A G+ PD++TYN++   Y + G   +A  +  +++  G
Sbjct: 343 IIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAG 402

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           + P+  T  I++ GYC+ G ++EA RF + M E G  P++  + +L+ G  ++ +   V 
Sbjct: 403 LAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVR 462

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           E    M    + PD   Y+T ++A    G   +  ++ + M   GI  D   Y+I   G 
Sbjct: 463 EFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGL 522

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +    + A  L M M+  G  P+ + +T +I   C  G +  A ++FD M   G+ P+ 
Sbjct: 523 CKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSA 582

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            T+   +  Y      + A    Q M   GV P + T+ +L  A    G T  A
Sbjct: 583 VTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLA 636



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/418 (26%), Positives = 189/418 (45%), Gaps = 2/418 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N L  +G+ ++A  + + +     K S  T+  L+     +       ++  ++E  G
Sbjct: 274 VINGLARKGELEKAAQLVDRM-RMSKKASAFTFNPLITGYFARGSVEKAGALQLEMENEG 332

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P  + +N +I+    SGN+E A   F +M+  GL P   TYN+LI GY  AG  +E++
Sbjct: 333 IVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEAL 392

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   + R G + P++ TYN+L+  +C   ++ EA     +M   G +PDV TY  +   
Sbjct: 393 WLFGDLKRAG-LAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNG 451

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +        E   EM   G+QP+       IS     G   EA +    M   G+  +
Sbjct: 452 SRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSD 511

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +N+ + G  +  +      +   M    + PD ITY+ +++A    G + + ++IFD
Sbjct: 512 TVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFD 571

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M  +G+ P A  Y++    Y R      A      M+E G  PN V +  +I   C  G
Sbjct: 572 GMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMG 631

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
             + A + F +M E G+SPN  T+  L+ G  +      A  +   M   G+HP   T
Sbjct: 632 RTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHCT 689



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 188/399 (47%), Gaps = 1/399 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L+     RG  ++A A+   +   G  P++VTY T++  +       +      ++
Sbjct: 304 TFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEM 363

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+ PD I +N++IN + ++GN++EA+  F  +K +GL P+  TYN L+ GY   G  
Sbjct: 364 RAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDL 423

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           EE+ +    M  +G  +P++ TY +L+      +N+        +M + G++PD   YNT
Sbjct: 424 EEARRFKQEMVEQG-CQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNT 482

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
             +A    G   +A ++   M   G+  +  T  I + G CK G +K+A      M   G
Sbjct: 483 RISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDG 542

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P+ + +  LI    E        ++   M    + P  +TY+  ++A+   G +    
Sbjct: 543 LQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAY 602

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
             F  M + G++P+   Y++L     R      A +    M+E G  PN   +T +I G 
Sbjct: 603 GWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGN 662

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
           C +G+ + AI ++ +M +HG+ P+  T   L  G+ E +
Sbjct: 663 CKEGNWEEAIRLYSEMHQHGIHPDHCTHNALFKGFDEGQ 701



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 180/386 (46%), Gaps = 2/386 (0%)

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G+ P     N V+ A  +    ++    + +M + G+ P+  TYNTL+  +   G
Sbjct: 186 EMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFREG 245

Query: 192 KPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           + +++ KLL ++ +R G   P+  TYNV++     +  + +A  ++ +M  S  K    T
Sbjct: 246 RVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSK-KASAFT 304

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +N + T Y   G  ++A  + +EME+ G+ P   T   II G  + G ++ A      M+
Sbjct: 305 FNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMR 364

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P+L+ +N LI G+ +  +      +   +K   + P V+TY+ +++ +   G ++
Sbjct: 365 AMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLE 424

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + +    +M + G +PD   Y+IL  G  + +      E    M+  G  P+   + T I
Sbjct: 425 EARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRI 484

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           S     GS   A ++ + M   G+S +  T+   + G  ++     A  +   M + G+ 
Sbjct: 485 SAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQ 544

Query: 491 PQKSTFLLLAEARRATGLTKEAKRIL 516
           P   T+  L  A    G  +EA+ I 
Sbjct: 545 PDCITYTCLIHAHCERGRLREARDIF 570



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/268 (29%), Positives = 131/268 (48%), Gaps = 2/268 (0%)

Query: 64  MNKESCRT-VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C+  V + T LMN   +       +  F+ ++  G +P    Y T ++A  I   
Sbjct: 433 MVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGS 492

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    +   +   G+  D++ +N  ++   +SGN+++A   + KM   GL P   TY  
Sbjct: 493 TSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTC 552

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI  +   G+  E+  + D M   G + P+  TY V + A+C   N+  A+    KM   
Sbjct: 553 LIHAHCERGRLREARDIFDGMLVSG-LPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEE 611

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G++P+ VTYN +  A  + G  + A +   EM   G+ PN  T  ++I G CKEG  +EA
Sbjct: 612 GVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEA 671

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +R    M ++G+HP+    N L KGF E
Sbjct: 672 IRLYSEMHQHGIHPDHCTHNALFKGFDE 699



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 59/245 (24%), Positives = 107/245 (43%), Gaps = 36/245 (14%)

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
           R M  +GV P +   NL+++   +    D +  V A M +  + P ++TY+T+++++   
Sbjct: 185 REMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDSFFRE 244

Query: 367 GFMDKCKEIFDDM--GKAGIKPDAHAYSILAKGYVREQEPEKAEELL------------- 411
           G +D+  ++  +M     G  P    Y+++  G  R+ E EKA +L+             
Sbjct: 245 GRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMRMSKKASAFT 304

Query: 412 ---------------------MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
                                + M   G  P VV + TII G    G+++ A   F +M 
Sbjct: 305 FNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMR 364

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
             G+ P+L T+ +L+ GY +A     A  +   +K  G+ P   T+ +L +     G  +
Sbjct: 365 AMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLE 424

Query: 511 EAKRI 515
           EA+R 
Sbjct: 425 EARRF 429


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/527 (24%), Positives = 235/527 (44%), Gaps = 70/527 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+N     G+  +A A+  ++      P   TY T+L  L   +++    ++M+
Sbjct: 180 VVTYTTLINGYCRSGRLADALALIASMPVA---PDTYTYNTVLMGLCGARQWEDAEALMA 236

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  N   P+ + F   I AF ++G ++ A+    +M + G TP    Y+TL+ G+   G
Sbjct: 237 EMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQG 296

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +++++LL+ M      KPN   YN  ++  C  +   +   ++ +M      P+  T+
Sbjct: 297 RVDDAIELLNGML----CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATF 352

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + + +   QNG  D A EV+ +M   G +P+      +I  + ++G++ +AL+   +M  
Sbjct: 353 SMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKLLNSMP- 411

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVL--------------------ALMKEFRVN- 350
               P+++ FN  +KG       D  +E++                    +L +  RVN 
Sbjct: 412 --CSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNN 469

Query: 351 --------------PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
                         PD++TYS+++N  S  G ++   E+F  M     KPD   Y+ + K
Sbjct: 470 AIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMP---CKPDIFGYNAVLK 526

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  R    E A EL+  M      PN + F  +I+  C  G +DRAIEVF++M ++G +P
Sbjct: 527 GLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTP 586

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           ++ T+  L+ G+SE     R ++  +++      P   ++                    
Sbjct: 587 DIFTYNALINGFSEQ---GRLDDARRLLSTMSCKPDAVSY-------------------N 624

Query: 517 SKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVS 563
           S +K   R    +  E++  E L         T  Y N L +PN V+
Sbjct: 625 SALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFKYANRLFVPNGVT 671



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 166/406 (40%), Gaps = 76/406 (18%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +I        + +A      +K +G     S +NTL+ GY   G+  ++ +LL   + 
Sbjct: 116 NILIKKLCAQRRLADAERVLDALKAAGAADPVS-HNTLVAGYCRDGRLADAERLL--AAA 172

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
             +   N+ TY  L+  +C    + +A  ++  M  +   PD  TYNT+        + +
Sbjct: 173 GLSGAANVVTYTTLINGYCRSGRLADALALIASMPVA---PDTYTYNTVLMGLCGARQWE 229

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            AE ++ EM  N   PN  T    I  +C+ G +  A++    M +YG  P++VI++ L+
Sbjct: 230 DAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLV 289

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA------------------- 366
            GF E   +  VD+ + L+      P+ I Y+  +     A                   
Sbjct: 290 NGFSE---QGRVDDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCL 346

Query: 367 ----------------GFMDKCKEIFDDMGKAGIKPDAHAYSILA--------------- 395
                           G +D   E+ + M K G +PDA  Y+ L                
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL 406

Query: 396 -----------------KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
                            KG  R +  + AEEL++ M+        + F  +I   C +G 
Sbjct: 407 LNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGR 466

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           ++ AIEVF++M ++G +P++ T+ +L+ G SE      A E+ Q M
Sbjct: 467 VNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM 512



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 104/215 (48%), Gaps = 14/215 (6%)

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV---DEVL 341
            C I+I   C + ++ +A R    +K  G   + V  N L+ G+     RDG     E L
Sbjct: 114 ACNILIKKLCAQRRLADAERVLDALKAAGAA-DPVSHNTLVAGYC----RDGRLADAERL 168

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
                     +V+TY+T++N +  +G +     +   M    + PD + Y+ +  G    
Sbjct: 169 LAAAGLSGAANVVTYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGA 225

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
           ++ E AE L+  M+ +   PN V F T I  +C +G +DRA+++ D+M ++G +P++  +
Sbjct: 226 RQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIY 285

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            TL+ G+SE     R ++ ++++      P    +
Sbjct: 286 STLVNGFSEQ---GRVDDAIELLNGMLCKPNTICY 317


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 216/452 (47%), Gaps = 20/452 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   ++N L + G+  +A  +F+ ++  G  P++VTY +++  L   +  +   +++ 
Sbjct: 139 VLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQ 198

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+                    + G +EEA+    KM   GL P   TY+ LI  Y   G
Sbjct: 199 QM-------------------FDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIG 239

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  + D M R G   P+  TY  L+  +  +  + +  +++  M   G+  +   +
Sbjct: 240 RCTEARNIFDSMVRRGQ-NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVF 298

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  AYA+N   D+A    +EM   G  PN  T   +I   CK G++++A+     M  
Sbjct: 299 NILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVS 358

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P+++ F  LI G   I +   V+++   M    ++P+ I  +TIM++    G + +
Sbjct: 359 EGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLE 418

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             + FD +   G+KPD  +Y+IL  GY  + + +++ +LL  M+  G  P+ V ++ +++
Sbjct: 419 AHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLN 478

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C +G +D A+ ++ +M    V PN  T+  ++ G   A +   A E    +   G+  
Sbjct: 479 GYCKNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQL 538

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
             +T+ ++           EA R+   +++KE
Sbjct: 539 GINTYNIVLGGLCENSFVDEALRMFQGLRSKE 570



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 231/482 (47%), Gaps = 13/482 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++   + G+  EA+ IF++++  G  P   TY TLL     +     +H +++
Sbjct: 225 VVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYATKGALVDMHDLLA 284

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + ++G+  +   FN +I A++++  +++AM  F +M++ G +P   TY T+I     AG
Sbjct: 285 LMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVTYTTVIDILCKAG 344

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E++V     M  EG + P++ T+  L+   C      +   +  +M   G+ P+ +  
Sbjct: 345 RVEDAVSHFSQMVSEG-LSPDIITFTSLIHGLCTIGEWKKVEKLSFEMINRGIHPNAIFL 403

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NTI  +  + G   +A +   ++ H GV+P+  +  I+I GYC +GK+ E+++    M  
Sbjct: 404 NTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMDESIKLLGRMVS 463

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEF---RVNPDVITYSTIMNAWSTAG 367
            G+ P+ V ++ L+ G+     ++G VD+ LAL +E     V P+ ITY+ I++    AG
Sbjct: 464 IGLRPDNVTYSALLNGYC----KNGRVDDALALYREMFSKDVKPNAITYNIILHGLFHAG 519

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +   +E +  +  +GI+   + Y+I+  G       ++A  +   +    F   V  F 
Sbjct: 520 RVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALRMFQGLRSKEFQLEVRTFN 579

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +I G    G +  A  +F  +   G+ P+   +  ++  + E      ++E+   M+  
Sbjct: 580 IMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQSHIEEGLLEESDELFLSMEKN 639

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESL--ERLYHK 545
           G      T   +       G  + A   L+KI  KE +  +EA   + + S+  ER Y K
Sbjct: 640 GCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYS--VEASTAVLLISIVSERKYQK 697

Query: 546 EA 547
           E 
Sbjct: 698 EV 699



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/368 (24%), Positives = 172/368 (46%), Gaps = 47/368 (12%)

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           S+ + M+QV  N +  D+  F  +I  F   G ++ A++                     
Sbjct: 77  SLFNTMAQVGVNKLATDACTFGILIRCFCNVGLLDFALEE-------------------- 116

Query: 185 KGYGIAGKPEESVKLLDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
                  +   S   + +M+ +G N  PN+ +YN+++     E  + +A+ + H+M   G
Sbjct: 117 -------ESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQG 169

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             P++VTYN++     +    D+AE V+ +M                     +G+++EA+
Sbjct: 170 FPPNIVTYNSVIDGLCKAQAMDKAEAVLQQM-------------------FDKGQLEEAV 210

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
           R  + M   G+ P++V ++LLI  + +I        +   M     NPD  TY T+++ +
Sbjct: 211 RLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGY 270

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
           +T G +    ++   M + GI  + H ++IL + Y + +  +KA    + M + GF PNV
Sbjct: 271 ATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNV 330

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           V +TT+I   C  G ++ A+  F +M   G+SP++ TF +L+ G     +  + E++   
Sbjct: 331 VTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFE 390

Query: 484 MKAFGVHP 491
           M   G+HP
Sbjct: 391 MINRGIHP 398


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/421 (25%), Positives = 197/421 (46%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G KP + T+  L+ AL    +      ++  +   G+ PD   F  V+  + E G+++ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGA 243

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           +    +M E G + +  + N ++ G+   G+ E+++  +  MS +    P+  T+N LV 
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C   ++  A  +M  M   G  PDV TYN++ +   + GE  +A EV+ +M      P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSP 363

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N  T   +IS  CKE +++EA   AR +   G+ P++  FN LI+G     +     E+ 
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M+     PD  TY+ ++++  + G +D+   +   M  +G       Y+ L  G+ + 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            +  +AEE+   M   G   N V + T+I G C    ++ A ++ D+M   G  P+  T+
Sbjct: 484 NKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTY 543

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            +L+  +       +A +I+Q M + G  P   T+  L       G  + A ++L  I+ 
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603

Query: 522 K 522
           K
Sbjct: 604 K 604



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/496 (24%), Positives = 225/496 (45%), Gaps = 39/496 (7%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF-NSIHSIMS 131
           ++ T +M   IE G    A  I   ++E G   S V+   ++     + R  ++++ I  
Sbjct: 225 KTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
              ++G  PD   FN ++N   ++G+++ A++    M + G  P   TYN++I G    G
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+V++LD M    +  PN  TYN L+   C E  + EA  +   + + G+ PDV T+
Sbjct: 345 EVKEAVEVLDQMITR-DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++            A E+  EM   G +P+  T  ++I   C +GK+ EAL   + M+ 
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G   +++ +N LI GF +       +E+   M+   V+ + +TY+T+++    +  ++ 
Sbjct: 464 SGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++ D M   G KPD + Y+ L   + R  + +KA +++  M  +G  P++V + T+IS
Sbjct: 524 AAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583

Query: 432 GWCSDGSMD-----------------------------------RAIEVFDKMCEHG-VS 455
           G C  G ++                                    AI +F +M E     
Sbjct: 584 GLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAP 643

Query: 456 PNLKTFETLMWGYSEARQPWR-AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
           P+  ++  +  G      P R A + L  +   G  P+ S+  +LAE      + +   +
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVK 703

Query: 515 ILSKIKNKERTNEMEA 530
           +++ +  K R +E E 
Sbjct: 704 LVNMVMQKARFSEEEV 719



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 192/425 (45%), Gaps = 36/425 (8%)

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           ++E G+ PD+ F+N ++N   +  +++    +  KM   G+ P  ST+N LIK    A +
Sbjct: 145 IDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQ 204

Query: 193 PEESVKLLDLMS-------------------REGNVKPNLR---------------TYNV 218
              ++ +L+ M                     EG++   LR               + NV
Sbjct: 205 LRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNV 264

Query: 219 LVRAWCNEKNITEAWNVMHKMA-ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +V  +C E  + +A N + +M+   G  PD  T+NT+     + G    A E++  M   
Sbjct: 265 IVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQE 324

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G  P+  T   +ISG CK G++KEA+     M      PN V +N LI    +    +  
Sbjct: 325 GYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEA 384

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E+  ++    + PDV T+++++             E+F++M   G +PD   Y++L   
Sbjct: 385 TELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDS 444

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
              + + ++A  +L  M  SG   +V+ + T+I G+C       A E+FD+M  HGVS N
Sbjct: 445 LCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRN 504

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-LLLAEARRATGLTKEAKRIL 516
             T+ TL+ G  ++R+   A +++  M   G  P K T+  LL    R   + K A  + 
Sbjct: 505 SVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQ 564

Query: 517 SKIKN 521
           +   N
Sbjct: 565 AMTSN 569



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 188/386 (48%), Gaps = 9/386 (2%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P+   +  ++     SG+ ++       MK S     TST+  LI+ Y      +E + +
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           +D M  E  +KP+   YN ++    +  ++        KM+  G+KPDV T+N +  A  
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +  +   A  ++ +M   G+ P+ +T   ++ GY +EG +  ALR    M E+G   + V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260

Query: 320 IFNLLIKGFVEIMDRDG-VDEVLALMKEFR----VNPDVITYSTIMNAWSTAGFMDKCKE 374
             N+++ GF     ++G V++ L  ++E        PD  T++T++N    AG +    E
Sbjct: 261 SVNVIVHGFC----KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           I D M + G  PD + Y+ +  G  +  E ++A E+L  MI     PN V + T+IS  C
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLC 376

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +  ++ A E+   +   G+ P++ TF +L+ G    R    A E+ + M++ G  P + 
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436

Query: 495 TFLLLAEARRATGLTKEAKRILSKIK 520
           T+ +L ++  + G   EA  +L +++
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQME 462



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 177/365 (48%), Gaps = 38/365 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR--------- 122
           V +   +++ L + G+ +EA  + + +I     P+ VTY TL++ L  + +         
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389

Query: 123 -------------FNSI---------HSIMSQVEE----NGMDPDSIFFNAVINAFSESG 156
                        FNS+         H +  ++ E     G +PD   +N +I++    G
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            ++EA++   +M+ SG   +  TYNTLI G+  A K  E+ ++ D M   G V  N  TY
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG-VSRNSVTY 508

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N L+   C  + + +A  +M +M   G KPD  TYN++ T + + G+  +A +++  M  
Sbjct: 509 NTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTS 568

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG-FVEIMDRD 335
           NG +P+  T G +ISG CK G+++ A +  R+++  G++     +N +I+G F +    +
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTE 628

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF-MDKCKEIFDDMGKAGIKPDAHAYSIL 394
            ++    ++++    PD ++Y  +       G  + +  +   ++ + G  P+  +  +L
Sbjct: 629 AINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688

Query: 395 AKGYV 399
           A+G +
Sbjct: 689 AEGLL 693



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/215 (28%), Positives = 103/215 (47%), Gaps = 5/215 (2%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R+V +   L++   +  K +EA+ IF+ +   G   + VTY TL+  L   +R      +
Sbjct: 468 RSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQL 527

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           M Q+   G  PD   +N+++  F   G++++A D    M  +G  P   TY TLI G   
Sbjct: 528 MDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587

Query: 190 AGKPEESVKLLDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-MKPD 247
           AG+ E + KLL  +  +G N+ P+   YN +++    ++  TEA N+  +M       PD
Sbjct: 588 AGRVEVASKLLRSIQMKGINLTPH--AYNPVIQGLFRKRKTTEAINLFREMLEQNEAPPD 645

Query: 248 VVTYNTIATAYAQ-NGEADQAEEVIVEMEHNGVQP 281
            V+Y  +        G   +A + +VE+   G  P
Sbjct: 646 AVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/353 (22%), Positives = 149/353 (42%), Gaps = 23/353 (6%)

Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA 232
           LTP +ST +        A      VKLLD +  + +    LR +N+  +           
Sbjct: 29  LTPPSSTIS--FASPHSAALSSTDVKLLDSLRSQPDDSAALRLFNLASKK---------- 76

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
                        P+   Y  I     ++G  D  ++++ +M+ +  +    T  I+I  
Sbjct: 77  ---------PNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIES 127

Query: 293 YCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
           Y +     E L     M  E+G+ P+   +N ++   V+      V+   A M  + + P
Sbjct: 128 YAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKP 187

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           DV T++ ++ A   A  +     + +DM   G+ PD   ++ + +GY+ E + + A  + 
Sbjct: 188 DVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIR 247

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYSE 470
             M+E G   + V    I+ G+C +G ++ A+    +M  + G  P+  TF TL+ G  +
Sbjct: 248 EQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCK 307

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           A     A EI+ +M   G  P   T+  +       G  KEA  +L ++  ++
Sbjct: 308 AGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRD 360


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 197/414 (47%), Gaps = 4/414 (0%)

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
           H+PS  +   LLA L   KR +             + PD   FN VI+     G + +A 
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGY---GIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           D    +K  GL P+ +TYN+LI GY   G AG       LL  M  E  + P   T+ VL
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV-EAGISPTAVTFGVL 270

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +  +C   N   A  V  +M   G+   VVTYN++ +     G+ ++  +++ EME  G+
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            PN  T G ++ G+CK+G + +A  +   M E  V P++VI+N+LI  +  +   +    
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           V   M +  ++P+V TY+ ++  +S +G       + D+M + GI+ D   Y++L     
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
            + E  KA +LL  M E G  PN + + TII G+C  G++  A E+  +M +     N+ 
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVV 510

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           T+   +  + +  +   A ++L  M    + P   T+  + E     G T + +
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIR 564



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 183/369 (49%), Gaps = 4/369 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI-- 129
           + +   +++ L   G+ ++A  +  ++   G  PS+ TY +L+     +    +++ +  
Sbjct: 191 IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM 250

Query: 130 -MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
            + ++ E G+ P ++ F  +IN + ++ N   A+  F +MK+ G+  +  TYN+LI G  
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLC 310

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             GK EE VKL++ M   G + PN  T+  +++ +C +  + +A + +  M    ++PDV
Sbjct: 311 SEGKVEEGVKLMEEMEDLG-LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDV 369

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           V YN +   Y + G+ + A  V   M   G+ PN  T   +I+G+ + G  + A      
Sbjct: 370 VIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDE 429

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           MKE G+  ++V +N+LI       +     ++L  M E  + P+ +TY+TI+  +   G 
Sbjct: 430 MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGN 489

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +    EI   M K   + +   Y++  K + +  + ++A +LL  M++    PN + + T
Sbjct: 490 IKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYET 549

Query: 429 IISGWCSDG 437
           I  G    G
Sbjct: 550 IKEGMMEKG 558



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 148/291 (50%), Gaps = 1/291 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   +      A  +F  + + G   S+VTY +L++ L  + +      +M ++E+ G
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ I F  V+  F + G M +A D    M E  + P    YN LI  Y   GK E+++
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            + + M+++G + PN+ TYN L+  +    +   A  ++ +M   G++ DVVTYN +  A
Sbjct: 390 AVKEAMAKKG-ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               GE  +A +++ EM   G++PN  T   II G+C +G IK A      M++     N
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRAN 508

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           +V +N+ IK F +I   D  +++L  M +  + P+ ITY TI       G+
Sbjct: 509 VVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGY 559



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 182/393 (46%), Gaps = 13/393 (3%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESG--LTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           +  + ++ A + +     A D F    ES     P+TS+ N L+ G   A + + + K  
Sbjct: 120 LIADMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAF 179

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
               R   V P++ T+N ++   C    + +A +V   + A G+ P V TYN++   Y +
Sbjct: 180 RSALRR-RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCK 238

Query: 261 NGEAD---QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            G A      + ++ EM   G+ P   T G++I+GYCK      A+R    MK+ G+  +
Sbjct: 239 KGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
           +V +N LI G         V+E + LM+E     ++P+ IT+  ++  +   G M    +
Sbjct: 299 VVTYNSLISGLCS---EGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADAND 355

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
             D M +  ++PD   Y+IL   Y R  + E A  +   M + G  PNV  +  +I+G+ 
Sbjct: 356 WIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFS 415

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G    A  + D+M E G+  ++ T+  L+       +  +A ++L  M   G+ P   
Sbjct: 416 RSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHL 475

Query: 495 TFLLLAEARRATGLTKEAKRILSKI-KNKERTN 526
           T+  + +     G  K A  I +++ K ++R N
Sbjct: 476 TYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRAN 508



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 173/351 (49%), Gaps = 24/351 (6%)

Query: 80  NSLIE-------RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           NSLI+        G       +   ++E G  P+ VT+  L+          +   +  +
Sbjct: 230 NSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEE 289

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +++ G+    + +N++I+     G +EE +    +M++ GL+P   T+  ++KG+   G 
Sbjct: 290 MKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGM 349

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             ++   +D M+ E NV+P++  YN+L+  +     + +A  V   MA  G+ P+V TYN
Sbjct: 350 MADANDWIDGMT-ERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYN 408

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            + T ++++G+   A  ++ EM+  G++ +  T  ++I   C +G++++A++    M E 
Sbjct: 409 CLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEV 468

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ PN + +N +I+GF +  +     E+   M++ R   +V+TY+  +  +   G MD+ 
Sbjct: 469 GLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEA 528

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
            ++ ++M    + P+   Y  + +G                M+E G+ P++
Sbjct: 529 NDLLNEMLDKCLVPNGITYETIKEG----------------MMEKGYTPDI 563



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 131/260 (50%), Gaps = 1/260 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   L++ L   GK +E   +   + + G  P+ +T+  +L     +      +  +
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWI 357

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + E  ++PD + +N +I+ +   G ME+AM     M + G++P  +TYN LI G+  +
Sbjct: 358 DGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRS 417

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    +  LLD M  +G ++ ++ TYNVL+ A C +  + +A  ++ +M+  G++P+ +T
Sbjct: 418 GDWRSASGLLDEMKEKG-IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNTI   +   G    A E+   ME    + N  T  + I  +C+ GK+ EA      M 
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536

Query: 311 EYGVHPNLVIFNLLIKGFVE 330
           +  + PN + +  + +G +E
Sbjct: 537 DKCLVPNGITYETIKEGMME 556


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 204/412 (49%), Gaps = 2/412 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LM++L  RG+ ++A  + +N++  G  P +VTY  LL A    + +     ++  +   G
Sbjct: 158 LMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEG 217

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P ++ +N +++     G+++ A +    +   G TP T  YNT++KG   AG+ E+  
Sbjct: 218 CTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVE 277

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+  M  E N  P+  T +V++ + C E     A  ++ KM+      ++VTYN + + 
Sbjct: 278 ELIAEMFSE-NCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSG 336

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G  D A  ++  M+ +G +PN  T  I++ G C   + ++A      M +    P+
Sbjct: 337 LCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPD 396

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ FN +I    +        EV   M E    P+ +TYS+++   +  G M++  E+ +
Sbjct: 397 ILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLN 456

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +MG  G  P+ + Y +LA+    E +  +A +++  + ++G  P  V++ TI+ G C +G
Sbjct: 457 EMGSKGFNPEIN-YHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNG 515

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             D+AI++   M   G  P+  T+  L+ G +       A E+L  + +  V
Sbjct: 516 KTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDV 567



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/456 (23%), Positives = 213/456 (46%), Gaps = 5/456 (1%)

Query: 68  SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           S  T  + + L +     G+  EA+ + + +      PS   Y  L+ AL ++ +     
Sbjct: 116 SAATAVTYSALADGYCRVGRLDEARRVVDGM---PVLPSAYAYNPLMHALCVRGQVRDAL 172

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            ++  +   G  PD + +N ++ A  +     +AM+    M+  G TPT  TYN ++ G 
Sbjct: 173 VLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGM 232

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G  + + +LL+ +   G   PN   YN +++         +   ++ +M +    P 
Sbjct: 233 CREGDVDYARELLNSLPSYG-CTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPS 291

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
             T + + ++  Q G   +A  ++ +M  +    N  T   ++SG C++G +  AL    
Sbjct: 292 EATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLS 351

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M+  G  PN+  +N+L+KG       +  ++++A M +    PD++T++TI+      G
Sbjct: 352 NMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKG 411

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
              +  E+F  M + G  P++  YS + +G  +  + E++ ELL  M   GF+P +  + 
Sbjct: 412 LTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEIN-YH 470

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +      +  +  AI++  K+ + G+SP    + T++ G     +  +A +IL  M + 
Sbjct: 471 LLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSD 530

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           G  P +ST+ +L +     G  KEA+ +LS + +++
Sbjct: 531 GCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRD 566



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 192/431 (44%), Gaps = 43/431 (9%)

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
           + + +  VE +   PD    N ++      G      D    ++  G   T  TY+ L  
Sbjct: 72  LDAALRVVESSLCPPDVALANRLVRDLCRRG---RPADAARVVEACGSAATAVTYSALAD 128

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           GY   G+ +E+ +++D M     V P+   YN L+ A C    + +A  ++  M   G  
Sbjct: 129 GYCRVGRLDEARRVVDGMP----VLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCA 184

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PDVVTYN +  A  +     QA E+I  M   G  P   T  +I+ G C+EG +  A   
Sbjct: 185 PDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYAREL 244

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP-------------- 351
             ++  YG  PN V +N ++KG       + V+E++A M      P              
Sbjct: 245 LNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQ 304

Query: 352 ---------------------DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
                                +++TY+ +++     G +D    +  +M   G KP+   
Sbjct: 305 EGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFT 364

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+IL KG    +  E AE+L+  M ++   P+++ F TII   C  G   +A+EVF +M 
Sbjct: 365 YNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMP 424

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E G  PN  T+ +++ G ++  +  ++ E+L  M + G +P+ + + LLAE         
Sbjct: 425 EKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEIN-YHLLAECLNEEDKLV 483

Query: 511 EAKRILSKIKN 521
           EA +++ K+++
Sbjct: 484 EAIQMVHKLQD 494



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 80/272 (29%), Positives = 140/272 (51%), Gaps = 8/272 (2%)

Query: 64  MNKESCRT-VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+K  C   + +   +++ L E+G    A  + +N+   G KP++ TY  L+  L   +R
Sbjct: 318 MSKHDCTANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAER 377

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +     +M+++ +    PD + FN +I    + G   +A++ F +M E G  P + TY++
Sbjct: 378 WEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSS 437

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I+G    GK E+S++LL+ M  +G   P +  Y++L      E  + EA  ++HK+  +
Sbjct: 438 VIEGLAKTGKMEQSLELLNEMGSKG-FNPEI-NYHLLAECLNEEDKLVEAIQMVHKLQDT 495

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P  V YNTI     +NG+ DQA +++  M  +G  P+  T  I+I G   EG +KEA
Sbjct: 496 GISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEA 555

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
                T+         VI + LIK    ++D+
Sbjct: 556 RELLSTLSSRD-----VIVDNLIKNDASLLDQ 582



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 151/344 (43%), Gaps = 35/344 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M+ +   G    A+ + N+L   G  P+ V Y T+L  L    R+  +  +++++    
Sbjct: 228 IMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSEN 287

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P     + VI++  + G  + A+    KM +   T    TYN ++ G    G  + ++
Sbjct: 288 CPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGAL 347

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M  +G  KPN+ TYN+LV+  CN +   +A ++M KM+ +   PD++T+NTI   
Sbjct: 348 YLLSNMQTDG-CKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGF 406

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK----------------- 300
             Q G   QA EV  +M   G  PN  T   +I G  K GK++                 
Sbjct: 407 LCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPE 466

Query: 301 -----------------EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
                            EA++    +++ G+ P  V++N ++ G       D   ++L+ 
Sbjct: 467 INYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSN 526

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           M      PD  TYS ++   +  G+M + +E+   +    +  D
Sbjct: 527 MVSDGCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVIVD 570


>gi|357122825|ref|XP_003563115.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Brachypodium distachyon]
          Length = 410

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 185/362 (51%), Gaps = 3/362 (0%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           A+++ +  SG++ EA   F  M   GLTP   T+  LI GY I G+ E+ + L + M R 
Sbjct: 43  ALVHGYCRSGDVAEAQRVFDVMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKM-RI 101

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G ++PNL TYN+LV  WC       A  +  +M A G+  +VV+YNT+     +  +   
Sbjct: 102 GGIEPNLYTYNILVGEWCRTGEFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKD 161

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A +++  M   G++P+  T  +++ GY K GK+  AL F+  M+  G  P+ V +N LI 
Sbjct: 162 ATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIA 221

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GF    D    +   + MKE  + P  +TY+ +++A++    MDK  E+F  M KAG++ 
Sbjct: 222 GFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEV 281

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   Y +L      E   + A +L  ++ E G     VI+  +I G+  +GS  +A+++ 
Sbjct: 282 DVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLI 341

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST--FLLLAEARR 504
            +M + G  PN  ++   +       +   AE ++  M   GV   +S    LL A+AR+
Sbjct: 342 MEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDMVRAGVQTSESVRQVLLNAKARQ 401

Query: 505 AT 506
            +
Sbjct: 402 GS 403



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 84/351 (23%), Positives = 168/351 (47%), Gaps = 2/351 (0%)

Query: 149 INAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
           +   S +G +  A+    +  ++G  T   +    L+ GY  +G   E+ ++ D+M R G
Sbjct: 9   VRRLSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFDVMPRLG 68

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
            + PN  T+  L+  +       +   +  KM   G++P++ TYN +   + + GE ++A
Sbjct: 69  -LTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERA 127

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
             +  EM   G+  N  +   +I+G C+  K+K+A +    M+  G+ P++V FNLL+ G
Sbjct: 128 RLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDG 187

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           + +             M+     P  +TY+ ++  +  A  M +    F DM + G+ P 
Sbjct: 188 YGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPT 247

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+IL   + RE + +KA E+   M ++G   +V  +  ++   C +G+M  A ++F 
Sbjct: 248 KVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQ 307

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
            + E G+      ++ L++GY      ++A +++  M+  G  P  +++ L
Sbjct: 308 SIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGL 358



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 159/335 (47%), Gaps = 9/335 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++     G+ ++  A+F  +  GG +P+L TY  L+        F     +  ++
Sbjct: 75  TFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTGEFERARLLFEEM 134

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+  + + +N +I        M++A      M+  G+ P+  T+N L+ GYG AGK 
Sbjct: 135 PAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKM 194

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             ++   + M R    +P+  TYN L+  +C  +++  A      M   G+ P  VTY  
Sbjct: 195 SNALHFSNQM-RMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTI 253

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A+A+  + D+A E+   ME  G++ + RT G+++   C EG +K+A +  +++ E G
Sbjct: 254 LIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKG 313

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEFRVN---PDVITYSTIMNAWSTAGFM 369
           +    VI+++LI G+     R+G   + + L+ E R     P+  +Y   +      G  
Sbjct: 314 LQVGNVIYDMLIYGY----GREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKC 369

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            + + + DDM +AG++       +L     R+  P
Sbjct: 370 SEAEALIDDMVRAGVQTSESVRQVLLNAKARQGSP 404



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/345 (22%), Positives = 157/345 (45%)

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
           +T    ++    AG+   ++ LL   ++ G+   ++     LV  +C   ++ EA  V  
Sbjct: 3   ATTAVAVRRLSAAGEVRSALALLARGAKAGDTTLDVAACTALVHGYCRSGDVAEAQRVFD 62

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
            M   G+ P+ VT+  +   Y  +G  ++   +  +M   G++PN  T  I++  +C+ G
Sbjct: 63  VMPRLGLTPNEVTFTALIHGYFIHGRREKGLALFEKMRIGGIEPNLYTYNILVGEWCRTG 122

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
           + + A      M   G+  N+V +N LI G           ++L LM+   + P V+T++
Sbjct: 123 EFERARLLFEEMPAKGITRNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFN 182

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++ +  AG M       + M  AG +P A  Y+ L  G+ R ++  +A      M E 
Sbjct: 183 LLVDGYGKAGKMSNALHFSNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKER 242

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  P  V +T +I  +  +  MD+A E+F  M + G+  +++T+  L+           A
Sbjct: 243 GLAPTKVTYTILIDAFARENDMDKAFEMFAGMEKAGLEVDVRTYGVLVHALCMEGNMKDA 302

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            ++ Q +   G+      + +L       G + +A +++ +++ K
Sbjct: 303 RKLFQSIGEKGLQVGNVIYDMLIYGYGREGSSYKAMKLIMEMRKK 347



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/256 (27%), Positives = 122/256 (47%), Gaps = 1/256 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R V S   L+  L    K ++A  +   +   G +PS+VT+  L+       + ++    
Sbjct: 141 RNVVSYNTLIAGLCRYRKMKDATQLLELMRREGIRPSVVTFNLLVDGYGKAGKMSNALHF 200

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
            +Q+   G  P ++ +NA+I  F  + +M  A   F  MKE GL PT  TY  LI  +  
Sbjct: 201 SNQMRMAGYQPSAVTYNALIAGFCRARDMIRANRAFSDMKERGLAPTKVTYTILIDAFAR 260

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
               +++ ++   M + G ++ ++RTY VLV A C E N+ +A  +   +   G++   V
Sbjct: 261 ENDMDKAFEMFAGMEKAG-LEVDVRTYGVLVHALCMEGNMKDARKLFQSIGEKGLQVGNV 319

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y+ +   Y + G + +A ++I+EM   G  PN  + G+ I   C +GK  EA      M
Sbjct: 320 IYDMLIYGYGREGSSYKAMKLIMEMRKKGFVPNSASYGLTIRILCNDGKCSEAEALIDDM 379

Query: 310 KEYGVHPNLVIFNLLI 325
              GV  +  +  +L+
Sbjct: 380 VRAGVQTSESVRQVLL 395


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/414 (28%), Positives = 197/414 (47%), Gaps = 4/414 (0%)

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
           H+PS  +   LLA L   KR +             + PD   FN VI+     G + +A 
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGY---GIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           D    +K  GL P+ +TYN+LI GY   G AG       LL  M  E  + P   T+ VL
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMV-EAGISPTAVTFGVL 270

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +  +C   N   A  V  +M   G+   VVTYN++ +     G+ ++  +++ EME  G+
Sbjct: 271 INGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGL 330

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            PN  T G ++ G+CK+G + +A  +   M E  V P++VI+N+LI  +  +   +    
Sbjct: 331 SPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMA 390

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           V   M +  ++P+V TY+ ++  +S +G       + D+M + GI+ D   Y++L     
Sbjct: 391 VKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALC 450

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
            + E  KA +LL  M E G  PN + + TII G+C  G++  A E+  +M +     N+ 
Sbjct: 451 CKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVV 510

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           T+   +  + +  +   A ++L  M    + P   T+  + E     G T + +
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGYTPDIR 564



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 183/369 (49%), Gaps = 4/369 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI-- 129
           + +   +++ L   G+ ++A  +  ++   G  PS+ TY +L+     +    +++ +  
Sbjct: 191 IYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDM 250

Query: 130 -MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
            + ++ E G+ P ++ F  +IN + ++ N   A+  F +MK+ G+  +  TYN+LI G  
Sbjct: 251 LLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLC 310

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             GK EE VKL++ M   G + PN  T+  +++ +C +  + +A + +  M    ++PDV
Sbjct: 311 SEGKVEEGVKLMEEMEDLG-LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDV 369

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           V YN +   Y + G+ + A  V   M   G+ PN  T   +I+G+ + G  + A      
Sbjct: 370 VIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDE 429

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           MKE G+  ++V +N+LI       +     ++L  M E  + P+ +TY+TI+  +   G 
Sbjct: 430 MKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGN 489

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +    EI   M K   + +   Y++  K + +  + ++A +LL  M++    PN + + T
Sbjct: 490 IKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYET 549

Query: 429 IISGWCSDG 437
           I  G    G
Sbjct: 550 IKEGMMEKG 558



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 148/291 (50%), Gaps = 1/291 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   +      A  +F  + + G   S+VTY +L++ L  + +      +M ++E+ G
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ I F  V+  F + G M +A D    M E  + P    YN LI  Y   GK E+++
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            + + M+++G + PN+ TYN L+  +    +   A  ++ +M   G++ DVVTYN +  A
Sbjct: 390 AVKEAMAKKG-ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGA 448

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               GE  +A +++ EM   G++PN  T   II G+C +G IK A      M++     N
Sbjct: 449 LCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRAN 508

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           +V +N+ IK F +I   D  +++L  M +  + P+ ITY TI       G+
Sbjct: 509 VVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKGY 559



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/393 (25%), Positives = 182/393 (46%), Gaps = 13/393 (3%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESG--LTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           +  + ++ A + +     A D F    ES     P+TS+ N L+ G   A + + + K  
Sbjct: 120 LIADMLVLALARASQPLRAYDAFLLAGESHPRHRPSTSSVNALLAGLVGAKRVDLAEKAF 179

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
               R   V P++ T+N ++   C    + +A +V   + A G+ P V TYN++   Y +
Sbjct: 180 RSALRR-RVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWGLAPSVATYNSLIDGYCK 238

Query: 261 NGEAD---QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            G A      + ++ EM   G+ P   T G++I+GYCK      A+R    MK+ G+  +
Sbjct: 239 KGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEEMKQQGIAAS 298

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
           +V +N LI G         V+E + LM+E     ++P+ IT+  ++  +   G M    +
Sbjct: 299 VVTYNSLISGLCS---EGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADAND 355

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
             D M +  ++PD   Y+IL   Y R  + E A  +   M + G  PNV  +  +I+G+ 
Sbjct: 356 WIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFS 415

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G    A  + D+M E G+  ++ T+  L+       +  +A ++L  M   G+ P   
Sbjct: 416 RSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHL 475

Query: 495 TFLLLAEARRATGLTKEAKRILSKI-KNKERTN 526
           T+  + +     G  K A  I +++ K ++R N
Sbjct: 476 TYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRAN 508



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 81/351 (23%), Positives = 173/351 (49%), Gaps = 24/351 (6%)

Query: 80  NSLIE-------RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           NSLI+        G       +   ++E G  P+ VT+  L+          +   +  +
Sbjct: 230 NSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTAAAVRVFEE 289

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +++ G+    + +N++I+     G +EE +    +M++ GL+P   T+  ++KG+   G 
Sbjct: 290 MKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGM 349

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             ++   +D M+ E NV+P++  YN+L+  +     + +A  V   MA  G+ P+V TYN
Sbjct: 350 MADANDWIDGMT-ERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYN 408

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            + T ++++G+   A  ++ EM+  G++ +  T  ++I   C +G++++A++    M E 
Sbjct: 409 CLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEV 468

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ PN + +N +I+GF +  +     E+   M++ R   +V+TY+  +  +   G MD+ 
Sbjct: 469 GLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEA 528

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
            ++ ++M    + P+   Y  + +G                M+E G+ P++
Sbjct: 529 NDLLNEMLDKCLVPNGITYETIKEG----------------MMEKGYTPDI 563



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 131/260 (50%), Gaps = 1/260 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   L++ L   GK +E   +   + + G  P+ +T+  +L     +      +  +
Sbjct: 298 SVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVLKGFCKKGMMADANDWI 357

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + E  ++PD + +N +I+ +   G ME+AM     M + G++P  +TYN LI G+  +
Sbjct: 358 DGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRS 417

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    +  LLD M  +G ++ ++ TYNVL+ A C +  + +A  ++ +M+  G++P+ +T
Sbjct: 418 GDWRSASGLLDEMKEKG-IEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLT 476

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNTI   +   G    A E+   ME    + N  T  + I  +C+ GK+ EA      M 
Sbjct: 477 YNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQIGKMDEANDLLNEML 536

Query: 311 EYGVHPNLVIFNLLIKGFVE 330
           +  + PN + +  + +G +E
Sbjct: 537 DKCLVPNGITYETIKEGMME 556


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/447 (25%), Positives = 222/447 (49%), Gaps = 4/447 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T  +  L   GK  EA  I   + + G  P +VTYT L+ AL   ++ +    + +
Sbjct: 260 VYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFA 319

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIA 190
           +++     PD + +  +++ FS++ +++ +++ FW +M++ G  P   T+  L+     A
Sbjct: 320 KMKTGRHKPDRVTYITLLDRFSDNRDLD-SVNQFWSEMEKDGHVPDVVTFTILVDALCKA 378

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E+   LD+M  +G + PNL TYN L+        + +A  +   M + G+KP   T
Sbjct: 379 GNFGEAFAKLDVMRDQG-ILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYT 437

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y      Y ++G++  A E   +M+  G+ PN   C   +    K G+ +EA +    +K
Sbjct: 438 YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK 497

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G+ P+ V +N+++K + ++ + D   ++L+ M E    PDVI  ++++N    A  +D
Sbjct: 498 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVD 557

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  ++F  M +  +KP    Y+ L  G  +  + ++A EL   M++ G  PN + F T+ 
Sbjct: 558 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 617

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C +  +  A+++  KM + G  P++ T+ T+++G  +  Q   A      MK   V+
Sbjct: 618 DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VY 676

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILS 517
           P   T   L       GL ++A +I++
Sbjct: 677 PDFVTLCTLLPGVVKAGLIEDAYKIIA 703



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 92/326 (28%), Positives = 169/326 (51%), Gaps = 9/326 (2%)

Query: 102  GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
            G +P L TY  L+  L           +  QV+  G  PD   +N +++A+ +SG ++E 
Sbjct: 782  GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDEL 841

Query: 162  MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLV 220
             + + +M      P T T+N +I G   AG  ++++ L  DLMS + +  P   TY  L+
Sbjct: 842  FEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMS-DRDFSPTACTYGPLI 900

Query: 221  RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
                    + EA  +   M+  G +P+   YN +   + + GEAD A  +   M   GV+
Sbjct: 901  DGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 960

Query: 281  PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
            P+ +T  +++   C  G++ E L + R +KE G++P++V +NL+I G  +      ++E 
Sbjct: 961  PDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKF---HRLEEA 1017

Query: 341  LALMKEFR----VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            L L  E +    + PD+ TY++++     AG +++  +I++++ +AG++P+   ++ L +
Sbjct: 1018 LVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1077

Query: 397  GYVREQEPEKAEELLMTMIESGFHPN 422
            GY    +PE A  +  TM+  GF PN
Sbjct: 1078 GYSLSGKPEHAYAVYQTMVTGGFSPN 1103



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 207/429 (48%), Gaps = 8/429 (1%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNN-LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
            ++  L+  +++ G  ++A  I  N L     +P+ + +  L+ ++  +   ++  S   +
Sbjct: 681  TLCTLLPGVVKAGLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSER 740

Query: 133  VEENGM--DPDSIFFNAVINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLIKGYGI 189
            +  NG+  D DSI    +  +F  + N   A   F K  K+ G+ P   TYN LI G   
Sbjct: 741  LVANGICRDGDSILVPIIRYSFKHN-NASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLE 799

Query: 190  AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            A   E +  +   +   G + P++ TYN L+ A+     I E + +  +M+A   +P+ +
Sbjct: 800  ADMIEIAQDVFLQVKNTGCI-PDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTI 858

Query: 250  TYNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            T+N + +   + G  D A ++  + M      P   T G +I G  K G++ EA +    
Sbjct: 859  THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG 918

Query: 309  MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
            M +YG  PN  I+N+LI GF +  + D    +   M +  V PD+ TYS +++     G 
Sbjct: 919  MSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 978

Query: 369  MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES-GFHPNVVIFT 427
            +D+    F ++ ++G+ PD   Y+++  G  +    E+A  L   M +S G  P++  + 
Sbjct: 979  VDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYN 1038

Query: 428  TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            ++I      G ++ A ++++++   G+ PN+ TF  L+ GYS + +P  A  + Q M   
Sbjct: 1039 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1098

Query: 488  GVHPQKSTF 496
            G  P   T+
Sbjct: 1099 GFSPNTGTY 1107



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 198/458 (43%), Gaps = 71/458 (15%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L++ L++     EA  ++  +I  G +PSL TY++L+  L  ++    I S+M  +
Sbjct: 192 SYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRR---DIESVMGLL 248

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +E                                M+  GL P   T+   I+  G AGK 
Sbjct: 249 KE--------------------------------METLGLKPNVYTFTICIRVLGRAGKI 276

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+ ++L  M  EG   P++ TY VL+ A C  + +  A  V  KM     KPD VTY T
Sbjct: 277 NEAYEILKRMDDEG-CGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYIT 335

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   ++ N + D   +   EME +G  P+  T  I++   CK G   EA      M++ G
Sbjct: 336 LLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQG 395

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW---------- 363
           + PNL  +N LI G + +   D   E+   M+   V P   TY   ++ +          
Sbjct: 396 ILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 455

Query: 364 -------------------------STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
                                    + AG   + K+IF  +   G+ PD+  Y+++ K Y
Sbjct: 456 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 515

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +  E ++A +LL  M+E+   P+V++  ++I+       +D A ++F +M E  + P +
Sbjct: 516 SKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTV 575

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            T+ TL+ G  +  +   A E+ + M   G  P   TF
Sbjct: 576 VTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 613



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/492 (22%), Positives = 221/492 (44%), Gaps = 46/492 (9%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            TV +   L+  L + GK QEA  +F  +++ G  P+ +T+ TL   L           ++
Sbjct: 574  TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 633

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++ + G  PD   +N +I    ++G ++EAM  F +MK+  + P   T  TL+ G   A
Sbjct: 634  FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKA 692

Query: 191  GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM------ 244
            G  E++ K++         +P    +  L+ +   E  I  A +   ++ A+G+      
Sbjct: 693  GLIEDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDS 752

Query: 245  -------------------------------KPDVVTYNTIATAYAQNGEADQAEEVIVE 273
                                           +P + TYN +     +    + A++V ++
Sbjct: 753  ILVPIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 812

Query: 274  MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
            +++ G  P+  T   ++  Y K GKI E     + M  +   PN +  N++I G V+  +
Sbjct: 813  VKNTGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGN 872

Query: 334  -RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
              D +D    LM +   +P   TY  +++  S +G + + K++F+ M   G +P+   Y+
Sbjct: 873  VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYN 932

Query: 393  ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            IL  G+ +  E + A  L   M++ G  P++  ++ ++   C  G +D  +  F ++ E 
Sbjct: 933  ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKES 992

Query: 453  GVSPNLKTFETLMWGYSEARQPWRAEEIL----QIMKAFGVHPQKSTFLLLAEARRATGL 508
            G++P++  +  ++ G  +     R EE L    ++ K+ G+ P   T+  L       G+
Sbjct: 993  GLNPDVVCYNLIINGLGKFH---RLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGM 1049

Query: 509  TKEAKRILSKIK 520
             +EA +I ++I+
Sbjct: 1050 VEEAGKIYNEIQ 1061



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 173/380 (45%), Gaps = 9/380 (2%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++ A    G +EE    F  M++  +   T+TY T+ K   + G   ++   L  M R
Sbjct: 124 NYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM-R 182

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           E     N  +YN L+      +  TEA  V  +M   G +P + TY+++     +  + +
Sbjct: 183 EFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDIE 242

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
               ++ EME  G++PN  T  I I    + GKI EA    + M + G  P++V + +LI
Sbjct: 243 SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 302

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                    D   EV A MK  R  PD +TY T+++ +S    +D   + + +M K G  
Sbjct: 303 DALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHV 362

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   ++IL     +     +A   L  M + G  PN+  + T+I G      +D A+E+
Sbjct: 363 PDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEI 422

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ----KSTFLLLAE 501
           FD M   GV P   T+   +  Y ++     A E  + MK  G+ P      ++   LA+
Sbjct: 423 FDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 482

Query: 502 ARRATGLTKEAKRILSKIKN 521
           A R     +EAK+I   +K+
Sbjct: 483 AGR----DREAKQIFYGLKD 498



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 163/333 (48%), Gaps = 9/333 (2%)

Query: 137  GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            G+ P    +N +I    E+  +E A D F ++K +G  P  +TYN L+  YG +GK +E 
Sbjct: 782  GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFLLDAYGKSGKIDEL 841

Query: 197  VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK-MAASGMKPDVVTYNTIA 255
             ++   MS     +PN  T+N+++       N+ +A ++ +  M+     P   TY  + 
Sbjct: 842  FEIYKEMSAH-ECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 900

Query: 256  TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               +++G   +A+++   M   G +PN     I+I+G+ K G+   A    + M + GV 
Sbjct: 901  DGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 960

Query: 316  PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKC 372
            P+L  +++L+     +     VDE L   +E +   +NPDV+ Y+ I+N       +++ 
Sbjct: 961  PDLKTYSVLVDCLCMV---GRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEA 1017

Query: 373  KEIFDDMGKA-GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F++M K+ GI PD + Y+ L          E+A ++   +  +G  PNV  F  +I 
Sbjct: 1018 LVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1077

Query: 432  GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            G+   G  + A  V+  M   G SPN  T+E L
Sbjct: 1078 GYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 96/411 (23%), Positives = 187/411 (45%), Gaps = 1/411 (0%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           T   +L AL +  +   +  +   +++  +  D+  +  +    S  G + +A     KM
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM 181

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
           +E G      +YN LI     +    E++++   M  +G  +P+L+TY+ L+      ++
Sbjct: 182 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDG-FRPSLQTYSSLMVGLGKRRD 240

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           I     ++ +M   G+KP+V T+        + G+ ++A E++  M+  G  P+  T  +
Sbjct: 241 IESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 300

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +I   C   K+  A      MK     P+ V +  L+  F +  D D V++  + M++  
Sbjct: 301 LIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDG 360

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             PDV+T++ +++A   AG   +     D M   GI P+ H Y+ L  G +R    + A 
Sbjct: 361 HVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 420

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           E+   M   G  P    +   I  +   G    A+E F+KM   G++PN+      ++  
Sbjct: 421 EIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 480

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           ++A +   A++I   +K  G+ P   T+ ++ +     G   EA ++LS++
Sbjct: 481 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 531



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 54/107 (50%), Gaps = 1/107 (0%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEG-GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
            ++N L +  + +EA  +FN + +  G  P L TY +L+  L I         I ++++  
Sbjct: 1004 IINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1063

Query: 137  GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            G++P+   FNA+I  +S SG  E A   +  M   G +P T TY  L
Sbjct: 1064 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 73/168 (43%)

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           T + ++ A    G +++   +FD M K  IK D + Y  + K    +    +A   L  M
Sbjct: 122 TCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDTNTYLTIFKCLSVKGGLRQAPFALRKM 181

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
            E GF  N   +  +I           A+EV+ +M   G  P+L+T+ +LM G  + R  
Sbjct: 182 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILDGFRPSLQTYSSLMVGLGKRRDI 241

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
                +L+ M+  G+ P   TF +        G   EA  IL ++ ++
Sbjct: 242 ESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDE 289


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 223/468 (47%), Gaps = 46/468 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSI 129
           +V +   LM+      +P    A F  L+  G +   +   T L  L   KR + ++  +
Sbjct: 155 SVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVL 214

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG--LTPTTSTYNTLIKGY 187
           + ++ + G  P++I +N VI +       +EA+D   +M + G   +P   ++NT+I G+
Sbjct: 215 LHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGF 274

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G+  ++  L++ M ++G V+P++ TYN +V A C  + + +A  V+ +M   G++PD
Sbjct: 275 FKQGEVSKACNLINEMVQKG-VEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPD 333

Query: 248 -----------------------------------VVTYNTIATAYAQNGEADQAEEVIV 272
                                              +VT+N+  ++  ++G +  AEE+  
Sbjct: 334 GLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQ 393

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
            M   G  P+  +  I++ GY  EG+  +      +M + G+  N   FN+LI    +  
Sbjct: 394 YMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAK-- 451

Query: 333 DRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
            R  +DE + +  E +   V PDV+TYST+++A+   G +    E F  M   G++P+  
Sbjct: 452 -RGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTV 510

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGF-HPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
            Y  L  G+    +  KA+EL+  M+  G   PN+V F++II   C++G +  A +VF+ 
Sbjct: 511 VYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNL 570

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           +   G  P + TF +L+ GY    +  +A  +L  M + G+ P   T+
Sbjct: 571 VIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTY 618



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 202/409 (49%), Gaps = 7/409 (1%)

Query: 88  PQEAQAIFNNLIEGGHKP-----SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS 142
           P    A+FN +      P     S+ TY  L+      +R +   +  +++   G+   +
Sbjct: 132 PALVLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRT 191

Query: 143 IFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           I  N  +     +   +EA+D    +M + G  P   +YNT+IK      + +E++ ++ 
Sbjct: 192 IEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQ 251

Query: 202 LMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
            M++EG    P++ ++N ++  +  +  +++A N++++M   G++PDVVTYN+I  A  +
Sbjct: 252 RMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCK 311

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
               D+AE V+ +M   GV+P+G T   II GY   G  KE+ +  R M   G+ P +V 
Sbjct: 312 ARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVT 371

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           FN  +    +       +E+   M      PD+++YS +++ ++T G       +F  M 
Sbjct: 372 FNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMA 431

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             GI  + H ++IL   + +    ++A  +   M   G  P+VV ++T+IS +C  G + 
Sbjct: 432 DKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLA 491

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            A+E F +M   G+ PN   + +L+ G+       +A+E++  M + G+
Sbjct: 492 DAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGI 540



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 214/442 (48%), Gaps = 20/442 (4%)

Query: 66  KESCRTVRSMTK------------LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTL 113
           KES +  R MT              M+SL + G+ ++A+ IF  +   GH P LV+Y+ L
Sbjct: 351 KESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSIL 410

Query: 114 LAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL 173
           L     + RF  ++++   + + G+  +   FN +I+A ++ G M+EAM  F +M+  G+
Sbjct: 411 LHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGV 470

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
            P   TY+TLI  +   G+  ++++    M   G ++PN   Y+ L+  +C   ++ +A 
Sbjct: 471 RPDVVTYSTLISAFCRMGRLADAMEKFSQMISIG-LEPNTVVYHSLIHGFCMHGDLVKAK 529

Query: 234 NVMHKMAASGM-KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
            ++ +M + G+ +P++V +++I  +    G    A +V   + H G +P   T   +I G
Sbjct: 530 ELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDG 589

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RV 349
           YC  GK+++A      M   G+ P++V +N L+ G+ +      +D+ L L +E    +V
Sbjct: 590 YCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCK---SGKIDDGLILFREMLHKKV 646

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            P  +TYS +++    AG     K++F +M  +G   D   Y IL KG  R    ++A  
Sbjct: 647 KPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAIT 706

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L   +       ++ I  T+I+        + A ++F  +   G+ PN+ T+  ++    
Sbjct: 707 LFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLL 766

Query: 470 EARQPWRAEEILQIMKAFGVHP 491
           +      A+ +   M+  G  P
Sbjct: 767 KEGSVEEADTMFSSMEKSGCAP 788



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/436 (23%), Positives = 206/436 (47%), Gaps = 2/436 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G  +E+  +F  +   G  P +VT+ + +++L    R      I   +   G  PD + +
Sbjct: 348 GHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSY 407

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           + +++ ++  G   +  + F  M + G+      +N LI  +   G  +E++ +   M  
Sbjct: 408 SILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQG 467

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G V+P++ TY+ L+ A+C    + +A     +M + G++P+ V Y+++   +  +G+  
Sbjct: 468 QG-VRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLV 526

Query: 266 QAEEVIVEMEHNGV-QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           +A+E++ EM   G+ +PN      II   C EG++ +A      +   G  P +V FN L
Sbjct: 527 KAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSL 586

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G+  +   +    VL  M    + PDV+TY+T+++ +  +G +D    +F +M    +
Sbjct: 587 IDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKV 646

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           KP    YSI+  G         A+++   MI+SG   ++  +  ++ G C +   D AI 
Sbjct: 647 KPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAIT 706

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           +F K+       ++    T++    + R+   A ++   +   G+ P  ST+ ++     
Sbjct: 707 LFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLL 766

Query: 505 ATGLTKEAKRILSKIK 520
             G  +EA  + S ++
Sbjct: 767 KEGSVEEADTMFSSME 782



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 163/337 (48%), Gaps = 2/337 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+++    G+  +A   F+ +I  G +P+ V Y +L+    +         ++S
Sbjct: 474 VVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVS 533

Query: 132 QVEENGM-DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           ++   G+  P+ +FF+++I++    G + +A D F  +   G  PT  T+N+LI GY + 
Sbjct: 534 EMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLV 593

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK E++  +LD M   G ++P++ TYN LV  +C    I +   +  +M    +KP  VT
Sbjct: 594 GKMEKAFGVLDAMVSVG-IEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVT 652

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +       G    A+++  EM  +G   +  T  I++ G C+     EA+     + 
Sbjct: 653 YSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLG 712

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                 ++ I N +I    ++  R+  +++ A +    + P+V TY  +++     G ++
Sbjct: 713 AMDCKFDITILNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVE 772

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
           +   +F  M K+G  P +   + + +  +++ +  KA
Sbjct: 773 EADTMFSSMEKSGCAPSSRLLNDIIRMLLQKGDIVKA 809



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/234 (21%), Positives = 102/234 (43%), Gaps = 1/234 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++   + GK  +   +F  ++    KP+ VTY+ +L  L    R ++   +  
Sbjct: 615 VVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFH 674

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ ++G   D   +  ++     +   +EA+  F K+         +  NT+I       
Sbjct: 675 EMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVR 734

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE+  L   +S  G V PN+ TY V++     E ++ EA  +   M  SG  P     
Sbjct: 735 RREEANDLFAAISTSGLV-PNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLL 793

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           N I     Q G+  +A   + +++   +     T  +++S +  +GK +E ++F
Sbjct: 794 NDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHREQIKF 847



 Score = 44.3 bits (103), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 28/126 (22%), Positives = 60/126 (47%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           +  ++N+L +  + +EA  +F  +   G  P++ TY  ++  L  +       ++ S +E
Sbjct: 723 LNTVINALYKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSME 782

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           ++G  P S   N +I    + G++ +A     K+  + ++   ST + L+  +   GK  
Sbjct: 783 KSGCAPSSRLLNDIIRMLLQKGDIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKGKHR 842

Query: 195 ESVKLL 200
           E +K L
Sbjct: 843 EQIKFL 848


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/430 (25%), Positives = 215/430 (50%), Gaps = 6/430 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH----KPSLVTYTTLLAALTIQKRFNSIH 127
           VRS   L+++ +   +  +A A F +L  G       P+L TY  +L +L ++   +   
Sbjct: 120 VRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGDLDRAV 179

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           ++   +   G+ PD I ++ +++ F ++  ++ A+    +M    + P    YN L+ G 
Sbjct: 180 TLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNALLGGC 239

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G+ E+++++ + + R+    PNL TYNV++   C      EA +V  +M A+  +PD
Sbjct: 240 FRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPD 299

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           ++TY T+     ++ + D A  V  EM   G+ P+      ++ G+C  G++ EA +F  
Sbjct: 300 MITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWD 359

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM-KEFRVNPDVITYSTIMNAWSTA 366
           +M   G+  N+  +N+++KG  +    D   ++  L+ K+  ++PD++T+ST+++     
Sbjct: 360 SMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEK 418

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           GF +K  +I ++   +G + D  +YS +  G  ++   + A +L   +    F PN  I+
Sbjct: 419 GFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIY 478

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
             +I+G+C       AI V+ +M E+  SP   T+ TL+ G  +A +   A    + M  
Sbjct: 479 NALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLE 538

Query: 487 FGVHPQKSTF 496
            G     +T+
Sbjct: 539 KGCMLDVNTY 548



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 198/398 (49%), Gaps = 9/398 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           L+      G+ ++A  ++  L+ + G  P+L TY  +L  L     F     +  ++  N
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVAN 294

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
              PD I +  +I+    S +++ A   + +M ++GL P    YN+L+KG+  AG+  E+
Sbjct: 295 NHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEA 354

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI---TEAWNVMHKMAASGMKPDVVTYNT 253
            K  D MS  G    N+ +YN++++   +   +   T+ W ++ K     + PD+VT++T
Sbjct: 355 WKFWDSMSVSG--IRNVTSYNIMLKGLFDGGMVDKATDLWELLEK--DDSLSPDMVTFST 410

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G A+++ +++ E   +G + +  +   +ISG CK+G++ +A++    +    
Sbjct: 411 MIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDS 470

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             PN  I+N LI GF +         V + M E   +P  ITY+T+++    A    +  
Sbjct: 471 FKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEAS 530

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
               +M + G   D + Y  L +G  R+++ + A  L   +++ G   +VV+   +I G 
Sbjct: 531 RFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGL 590

Query: 434 CSDGSMDRAIEVFDKMCE-HGVSPNLKTFETLMWGYSE 470
           CS G +D A ++  +M E +   PN+ T+ TLM G+ E
Sbjct: 591 CSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYE 628



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/426 (22%), Positives = 209/426 (49%), Gaps = 2/426 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L + G  +EA  ++  ++   H+P ++TY T++  L      +S   + S++ + G
Sbjct: 271 MLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTG 330

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +N+++  F  +G + EA   +  M  SG+   TS YN ++KG    G  +++ 
Sbjct: 331 LVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIRNVTS-YNIMLKGLFDGGMVDKAT 389

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L +L+ ++ ++ P++ T++ ++   C +    ++  ++ +   SG + D  +Y+++ + 
Sbjct: 390 DLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISG 449

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             ++G  D A ++  ++  +  +PN      +I+G+C+  K  +A+R    M E    P 
Sbjct: 450 LCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPT 509

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +N LI G  +             M E     DV TY +++        +D    +++
Sbjct: 510 TITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWN 569

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE-SGFHPNVVIFTTIISGWCSD 436
            +   G++ D   ++IL  G     + ++A +LL  M E +   PNVV + T++ G+   
Sbjct: 570 QILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYET 629

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G  D+A  ++  + E+G+ P++ ++ T + G     +     ++L  M A G+ P   T+
Sbjct: 630 GCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITW 689

Query: 497 LLLAEA 502
            +L  A
Sbjct: 690 NILVRA 695



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 87/379 (22%), Positives = 184/379 (48%), Gaps = 7/379 (1%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKES-GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
            V++AFS +   + A+  F ++    G  P   ++N L+  +  A +  ++      +S 
Sbjct: 89  VVLSAFSRALMPDAALAAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSH 148

Query: 206 EG---NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
                 + PNL+TYN+++R+ C   ++  A  +   +   G+ PD +TY+T+ + + +N 
Sbjct: 149 GAFGRRIAPNLQTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNN 208

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR-FARTMKEYGVHPNLVIF 321
             D A  ++ EM    VQP+      ++ G  + G+ ++A+R + + +++ G  PNL  +
Sbjct: 209 RLDNALYLLDEMPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATY 268

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N+++ G  ++       +V   M      PD+ITY T+++    +  +D    ++ +M K
Sbjct: 269 NVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIK 328

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G+ PD   Y+ L KG+       +A +   +M  SG   NV  +  ++ G    G +D+
Sbjct: 329 TGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDK 387

Query: 442 AIEVFDKM-CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
           A ++++ +  +  +SP++ TF T++ G  E     ++ +IL+  +  G    + ++  + 
Sbjct: 388 ATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMI 447

Query: 501 EARRATGLTKEAKRILSKI 519
                 G   +A ++  KI
Sbjct: 448 SGLCKDGRLDDAVKLYEKI 466



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/339 (24%), Positives = 159/339 (46%), Gaps = 3/339 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNL-IEGGHKPSLVTYTTLLAALTIQKR 122
           M+    R V S   ++  L + G   +A  ++  L  +    P +VT++T++  L  +  
Sbjct: 361 MSVSGIRNVTSYNIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGF 420

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            N    I+ +   +G + D   ++++I+   + G +++A+  + K+      P +  YN 
Sbjct: 421 ANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNA 480

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+  A K  +++++   M+ E +  P   TYN L+   C  +   EA     +M   
Sbjct: 481 LINGFCQASKFSDAIRVYSQMA-ENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEK 539

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G   DV TY ++     ++ + D A  +  ++   G+Q +     I+I G C  GK+ EA
Sbjct: 540 GCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEA 599

Query: 303 LRFARTMKEYG-VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
            +    MKE     PN+V +N L+ GF E    D    +   + E  + PD+I+Y+T + 
Sbjct: 600 SQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIK 659

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
              +     +  ++ ++M  +GI P A  ++IL +  ++
Sbjct: 660 GLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIK 698



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 103/223 (46%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   +  K  +A  +++ + E    P+ +TY TL+  L   +++        ++ E G
Sbjct: 481 LINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKG 540

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              D   + ++I        ++ A+  + ++ + GL      +N LI G   AGK +E+ 
Sbjct: 541 CMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEAS 600

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL  M  + N  PN+ TYN L+  +       +A ++   +  +G+ PD+++YNT    
Sbjct: 601 QLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKG 660

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
                   +  +++ EM  +G+ P   T  I++    K G I+
Sbjct: 661 LCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 95/193 (49%), Gaps = 2/193 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  +   L++ L +  K  EA      ++E G    + TY +L+  L   K+ +   ++ 
Sbjct: 509 TTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALW 568

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE-SGLTPTTSTYNTLIKGYGI 189
           +Q+ + G+  D +  N +I+    +G ++EA     +MKE +   P   TYNTL+ G+  
Sbjct: 569 NQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYE 628

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G  +++  L   +   G V P++ +YN  ++  C+     E   ++++M ASG+ P  +
Sbjct: 629 TGCFDKAASLWMAILENGLV-PDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAI 687

Query: 250 TYNTIATAYAQNG 262
           T+N +  A  + G
Sbjct: 688 TWNILVRAVIKYG 700



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/234 (20%), Positives = 100/234 (42%), Gaps = 9/234 (3%)

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS--TIMNAWSTAGFMDKCK 373
           P  ++F+LL +       R  +  +L ++   R  P     +   +++A+S A   D   
Sbjct: 47  PQPLLFHLLRRLATSSPSR--LPRLLGILPRLRHRPRFSESAALVVLSAFSRALMPDAAL 104

Query: 374 EIFDDMGK-AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF----HPNVVIFTT 428
             F  +    G  P   +++ L   +VR +    A+    ++    F     PN+  +  
Sbjct: 105 AAFRRLPSFLGCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNI 164

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++   C  G +DRA+ +FD +   G++P+  T+ TLM G+ +  +   A  +L  M ++ 
Sbjct: 165 MLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYE 224

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
           V P    +  L       G  ++A R+  ++      +   A  ++ ++ L +L
Sbjct: 225 VQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKL 278


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/428 (25%), Positives = 206/428 (48%), Gaps = 43/428 (10%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           +I+   +P   T+  LL  L    +      ++ +++E G  PD   +NA+I+ +S++ +
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
             +A     +M ++   PT  TY  ++ G   AG+ +++VKLLD M R+    PN+ TYN
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEM-RDKGCSPNIYTYN 119

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN------------------------- 252
           V+V   C E+ + EA  ++ +MA  G  PDVVTYN                         
Sbjct: 120 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVT 179

Query: 253 -------TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
                  T+     ++G+ D A  ++ +M + G  P+  T   +I G+CK G+++ A+  
Sbjct: 180 PDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGL 239

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
             +M + G  PN+V +N L+     +      +++L  M+     PDV++Y+  ++    
Sbjct: 240 LDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCK 299

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
           A  + K K +FD M + G  P+A +YS+L +   +++E + A  L+    E     ++++
Sbjct: 300 AERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILL 359

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVS-PNLKTFETLMWGYSEARQPWRAEEILQIM 484
           +T ++ G C  G  D A  +F K+ +  +  P++  +  ++  + + R         QI 
Sbjct: 360 YTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRR---------QID 410

Query: 485 KAFGVHPQ 492
           KA  +H Q
Sbjct: 411 KALQIHKQ 418



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/443 (22%), Positives = 212/443 (47%), Gaps = 46/443 (10%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C  TV + T +++ L + G+ ++A  + + + + G  P++ TY  ++  L  +++
Sbjct: 71  MVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERK 130

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    ++ ++   G  PD + +N+ I    +   ++EA     +M    +TP   +Y T
Sbjct: 131 LDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP---VTPDVVSYTT 187

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G   +G  + + ++LD M+  G   P++ TY+ L+  +C    +  A  ++  M   
Sbjct: 188 VINGLCKSGDLDSASRMLDQMTNRG-CTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKL 246

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G +P++V YN++  A  + G   +AE+++VEME  G  P+  +    I G CK  ++K+A
Sbjct: 247 GCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKA 306

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTI 359
                 M E G  PN   +++L++   E+  +  +D+ + L+++ R      D++ Y+ +
Sbjct: 307 KAVFDRMVERGCTPNASSYSMLVE---ELCKKKELDDAITLVEQAREKYQIVDILLYTVL 363

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGI-KPDAHAYSILAKGYVREQEPEK------------ 406
           ++     G  D+   +F  +    I +PD   Y+++   + + ++ +K            
Sbjct: 364 LDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERN 423

Query: 407 ----------------------AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
                                 AE +L+TM++ GF P+ V + T++   C  G    A+E
Sbjct: 424 CCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALE 483

Query: 445 VFDKMCEHGVSPNLKTFETLMWG 467
           +F++  + G  P++ T+  L+ G
Sbjct: 484 LFEEAVKGGCVPDVVTYSALITG 506



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 93/334 (27%), Positives = 163/334 (48%), Gaps = 4/334 (1%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M +    P   T+  L++G   + + E++ +LL  M   G V P+   YN L+  +   K
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCV-PDDAIYNALISGYSKAK 59

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           +  +A+  + +M  +   P VVTY  I     + G    A +++ EM   G  PN  T  
Sbjct: 60  DFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYN 119

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           +I+ G C+E K+ EA +    M   G  P++V +N  IKG  +    D VDE    +   
Sbjct: 120 VIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKC---DRVDEARKFLARM 176

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            V PDV++Y+T++N    +G +D    + D M   G  PD   YS L  G+ +  E E+A
Sbjct: 177 PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERA 236

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             LL +M++ G  PN+V + +++      G + +A ++  +M   G +P++ ++   + G
Sbjct: 237 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 296

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
             +A +  +A+ +   M   G  P  S++ +L E
Sbjct: 297 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLVE 330



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 209/453 (46%), Gaps = 15/453 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N L + G    A  + + +   G  P +VTY++L+              ++ 
Sbjct: 182 VVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLD 241

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G  P+ + +N+++ A    G++ +A D   +M+  G TP   +YN  I G   A 
Sbjct: 242 SMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAE 301

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +++  + D M   G   PN  +Y++LV   C +K + +A  ++ +        D++ Y
Sbjct: 302 RVKKAKAVFDRMVERG-CTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLY 360

Query: 252 NTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
             +     + G  D+A  +  + ++    +P+     +++  +CK  +I +AL+  + M 
Sbjct: 361 TVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQML 420

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDR--DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           E     N+V +N+L+ G   + DR  D    +L ++ E  + PD +TY T+++A    G 
Sbjct: 421 ERNC-CNVVTWNILVHGLC-VDDRLSDAETMLLTMVDEGFI-PDFVTYGTLVDAMCKCGK 477

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
                E+F++  K G  PD   YS L  G V E   E+A  LL T +      +V ++  
Sbjct: 478 SAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEA-YLLFTKL------DVALWNA 530

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG-YSEARQPWRAEEILQIMKAF 487
           +I G+  +GS D  +++F ++ E  V PN +TF   + G   +A    +A  +       
Sbjct: 531 MILGYAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKG 590

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           G  P       L +     G  +EA+RI   +K
Sbjct: 591 GFFPDLFVANTLIDVFAKCGDLEEARRIFYSMK 623



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 155/315 (49%), Gaps = 9/315 (2%)

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
           + +P+  T+ +L+R  C    + +A  ++ +M   G  PD   YN + + Y++  +  QA
Sbjct: 5   SCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQA 64

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
            + + EM  N   P   T   I+ G CK G+ K+A++    M++ G  PN+  +N++++G
Sbjct: 65  FKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEG 124

Query: 328 FVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
             E      +DE   +++E  V    PDV+TY++ +        +D+ ++    + +  +
Sbjct: 125 LCE---ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKF---LARMPV 178

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            PD  +Y+ +  G  +  + + A  +L  M   G  P+VV ++++I G+C  G ++RA+ 
Sbjct: 179 TPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMG 238

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + D M + G  PN+  + +L+          +AE++L  M+  G  P   ++    +   
Sbjct: 239 LLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLC 298

Query: 505 ATGLTKEAKRILSKI 519
                K+AK +  ++
Sbjct: 299 KAERVKKAKAVFDRM 313



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 70/287 (24%), Positives = 133/287 (46%), Gaps = 32/287 (11%)

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M     QP+  T  I++ G C+  ++++A +    MKE G  P+  I+N LI G+ +  D
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
                + LA M +    P V+TY+ I++    AG      ++ D+M   G  P+ + Y++
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIF--------------------------- 426
           + +G   E++ ++A+++L  M   G+ P+VV +                           
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180

Query: 427 -----TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
                TT+I+G C  G +D A  + D+M   G +P++ T+ +L+ G+ +  +  RA  +L
Sbjct: 181 DVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLL 240

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEM 528
             M   G  P    +  L  A    G   +A+ +L +++ +  T ++
Sbjct: 241 DSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDV 287



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/304 (25%), Positives = 130/304 (42%), Gaps = 34/304 (11%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + L+  L ++ +  +A  +     E      ++ YT LL  L    RF+   ++ S+V
Sbjct: 324 SYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKV 383

Query: 134 -EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
            +E   +PD  F+N ++++  +   +++A+    +M E        T+N L+ G  +  +
Sbjct: 384 LDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLERNCCNVV-TWNILVHGLCVDDR 442

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             ++  +L  M  EG + P+  TY  LV A C       A  +  +    G  PDVVTY+
Sbjct: 443 LSDAETMLLTMVDEGFI-PDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVVTYS 501

Query: 253 TIATA----------------------------YAQNGEADQAEEVIVEMEHNGVQPNGR 284
            + T                             YA+NG  D   ++ VE+  + V+PN R
Sbjct: 502 ALITGLVHENMAEEAYLLFTKLDVALWNAMILGYAENGSGDLGLKLFVELIESDVEPNAR 561

Query: 285 TCGIIISGYCKEGKIKEALR--FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
           T G  ISG   + +     R  F R +K  G  P+L + N LI  F +  D +    +  
Sbjct: 562 TFGKEISGKLVKAESLGKARGLFDRAVKG-GFFPDLFVANTLIDVFAKCGDLEEARRIFY 620

Query: 343 LMKE 346
            MK+
Sbjct: 621 SMKQ 624


>gi|356533316|ref|XP_003535211.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Glycine max]
          Length = 918

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 230/492 (46%), Gaps = 39/492 (7%)

Query: 53  DSQPQTHCSFCMNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYT 111
           D +   HC   M +E    T+ + + ++    + GK   A   F    E     + VTY 
Sbjct: 324 DMEEALHCVRKMKEEGIEMTIVTYSIIVGGFAKMGKADAADHWFKEAKEKLPSLNAVTYG 383

Query: 112 TLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES 171
           +++ A       +   +++ ++E  G+D     ++ +++ ++  GN E+ +  F ++KE 
Sbjct: 384 SIIYAHCQTCNMDRAEALVREMEVQGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKEC 443

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE 231
           G +P+  +Y  LI  Y   GK  +++++  +M   G +K N++TY++L+  +   K+   
Sbjct: 444 GFSPSVISYGCLINLYTKIGKVSKALQISKMMKMSG-IKHNMKTYSMLINGFLKLKDWAN 502

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           A++V       G+KPDVV YN I TA+      D+A  ++ +M+    +P  RT   II 
Sbjct: 503 AFSVFEDFTKDGLKPDVVLYNNIITAFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIH 562

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
           G+ + G+++ AL     M+  G  P +  +N LI G VE         +L  M    V P
Sbjct: 563 GFARAGEMRRALEIFDMMRRSGCIPTVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGP 622

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH---------------------- 389
           +  TY+T+M  +++ G  +K  + F  +   G++ D +                      
Sbjct: 623 NEHTYTTLMQGYASLGDTEKAFQYFSVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVT 682

Query: 390 -------------AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
                         Y+IL  G+ R  +  +A +L+  M + G  P++  +T+ ++  C  
Sbjct: 683 KEMSAKNIPRNTFVYNILIDGWARRGDVWEAADLMQQMRKEGVLPDIHTYTSFVNACCKA 742

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G M +A E+  +M   G+ PNLKT+ TL+ G++ A  P +A    + MK   + P K+ +
Sbjct: 743 GDMQKATEIIQEMEAFGIKPNLKTYTTLINGWARASMPEKALSCFEEMKLAELKPDKAAY 802

Query: 497 --LLLAEARRAT 506
             L+ +   RAT
Sbjct: 803 HCLMTSLLSRAT 814



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 216/461 (46%), Gaps = 13/461 (2%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           +KE   + +S  K++ +     +P+  QA+     E   KP+   Y  ++     +   +
Sbjct: 238 HKERDGSRKSFQKVLET-----QPENWQAVVTAF-ERIKKPARKEYGLMVKYYARRGDMH 291

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
                   ++  G++P S  ++++I+A++   +MEEA+    KMKE G+  T  TY+ ++
Sbjct: 292 HARQTFESMQARGIEPSSHVYSSLIHAYAVGRDMEEALHCVRKMKEEGIEMTIVTYSIIV 351

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVK-PNLR--TYNVLVRAWCNEKNITEAWNVMHKMAA 241
            G+   GK + +    D   +E   K P+L   TY  ++ A C   N+  A  ++ +M  
Sbjct: 352 GGFAKMGKADAA----DHWFKEAKEKLPSLNAVTYGSIIYAHCQTCNMDRAEALVREMEV 407

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G+   +  Y+T+   Y   G  ++   V   ++  G  P+  + G +I+ Y K GK+ +
Sbjct: 408 QGIDAPIDIYHTMMDGYTMIGNEEKCLIVFDRLKECGFSPSVISYGCLINLYTKIGKVSK 467

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           AL+ ++ MK  G+  N+  +++LI GF+++ D      V     +  + PDV+ Y+ I+ 
Sbjct: 468 ALQISKMMKMSGIKHNMKTYSMLINGFLKLKDWANAFSVFEDFTKDGLKPDVVLYNNIIT 527

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
           A+     MD+   +   M K   +P    +  +  G+ R  E  +A E+   M  SG  P
Sbjct: 528 AFCGMSNMDRAICMVKQMQKERYRPTTRTFLPIIHGFARAGEMRRALEIFDMMRRSGCIP 587

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            V  +  +I G      M +A+ + D+M   GV PN  T+ TLM GY+      +A +  
Sbjct: 588 TVHTYNALILGLVEKRKMAKAVAILDQMNVAGVGPNEHTYTTLMQGYASLGDTEKAFQYF 647

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            +++  G+     T+  L ++   +G  + A  +  ++  K
Sbjct: 648 SVLRNEGLEIDVYTYEALLKSCCKSGRMQSALAVTKEMSAK 688


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 230/494 (46%), Gaps = 45/494 (9%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++ L ++G+  EA+A+F  +   G  P +VTY +L+           +  ++S
Sbjct: 199 VFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVS 258

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNME-------------------------------- 159
           ++ ++G   D + +NA+IN FS+ G +E                                
Sbjct: 259 EMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEG 318

Query: 160 ---EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
              EAM  F +M+  G+ P   TY +L+ G   AG+ ++++ LLD M  +G V PN+ TY
Sbjct: 319 LVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLV-PNVVTY 377

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
            V+V   C E  +  A +V+  M  +G+K + + Y T+   +  N  +++A +++ EM++
Sbjct: 378 TVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKN 437

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G++ +    G +I G CK  K+ EA      M + G+ PN VI+  ++  F +      
Sbjct: 438 KGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESE 497

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              +L  + +  + P+V+TY  +++    AG + +    FD M + G+ P+   Y+ L  
Sbjct: 498 AVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLID 557

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G+ +     KA  L+  M++ G   + V++T++I G    G +  A  +  KM E G+  
Sbjct: 558 GFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQL 617

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +L  +   + G+        A  +L  M   G+ P K+ +  L    +  G  +EA  + 
Sbjct: 618 DLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSL- 676

Query: 517 SKIKNKERTNEMEA 530
                    NEME+
Sbjct: 677 --------QNEMES 682



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 201/432 (46%), Gaps = 1/432 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T+  N ++ R        +   L E    P++ T+  ++  L  Q       ++  +++ 
Sbjct: 168 TRTCNHILLRLARNRQGGLVRRLFEHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKA 227

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  PD + +N++I+ + + G +EE      +M++SG      TYN LI  +   G  E+
Sbjct: 228 MGCSPDVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEK 287

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +      M R G V  N+ T +  V A+C E  + EA  +  +M   GM P+  TY ++ 
Sbjct: 288 AYSYFGEMKRLG-VMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLV 346

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G  D A  ++ EM H G+ PN  T  +++ G CKEGK+  A      M+  GV 
Sbjct: 347 DGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVK 406

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            N +++  LI G     + +   ++L  MK   +  DV  Y T++        +D+ K +
Sbjct: 407 ANELLYTTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSL 466

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
              M   G++P+   Y+ +   + +  +  +A  LL  + +SG  PNVV +  +I G C 
Sbjct: 467 LHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCK 526

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            GS+  AI  FDKM E G+ PN++ + TL+ G+ +     +A  ++  M   G+   K  
Sbjct: 527 AGSIYEAISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVV 586

Query: 496 FLLLAEARRATG 507
           +  L +     G
Sbjct: 587 YTSLIDGHMKQG 598



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 104/383 (27%), Positives = 192/383 (50%), Gaps = 1/383 (0%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P+   FN VI+   + G + EA   F +MK  G +P   TYN+LI GYG  G+ EE V+L
Sbjct: 197 PNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEE-VEL 255

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           L    R+     ++ TYN L+  +     I +A++   +M   G+  +VVT +T   A+ 
Sbjct: 256 LVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFC 315

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           + G   +A ++  +M   G+ PN  T   ++ G CK G++ +A+     M   G+ PN+V
Sbjct: 316 KEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVV 375

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            + +++ G  +       D+VL+LM+   V  + + Y+T+++        ++  ++ ++M
Sbjct: 376 TYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEM 435

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G++ D   Y  L  G  + Q+ ++A+ LL  M + G  PN VI+TTI+  +   G  
Sbjct: 436 KNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKE 495

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             A+ +  K+ + G+ PN+ T+  L+ G  +A   + A      M+  G+ P    +  L
Sbjct: 496 SEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTL 555

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
            +     G   +A  +++++ +K
Sbjct: 556 IDGFCKIGSLSKAVHLMNEMVDK 578



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 73/304 (24%), Positives = 140/304 (46%), Gaps = 31/304 (10%)

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC----------------------- 286
            ++T+ +  A +G  D A   +  +    V PN RTC                       
Sbjct: 135 VFDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLFEHL 194

Query: 287 --------GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
                    I+I   CK+G++ EA      MK  G  P++V +N LI G+ +  + + V+
Sbjct: 195 PAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVE 254

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            +++ M++     DV+TY+ ++N +S  G+++K    F +M + G+  +    S     +
Sbjct: 255 LLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAF 314

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +E    +A +L   M   G  PN   +T+++ G C  G +D AI + D+M   G+ PN+
Sbjct: 315 CKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNV 374

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+  ++ G  +  +   A+++L +M+  GV   +  +  L         ++ A  +L++
Sbjct: 375 VTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNE 434

Query: 519 IKNK 522
           +KNK
Sbjct: 435 MKNK 438


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/524 (25%), Positives = 235/524 (44%), Gaps = 70/524 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++     G+  +A  +  ++      P   TY T+L  L I K++     +M+
Sbjct: 158 VVTYTALIDGYCRSGRLDDALRLIASMPVA---PDTYTYNTVLKGLCIAKKWEEAEELMA 214

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  N   P+ + F   I +F ++G ++ A+    +M   G TP    Y+TLI G+   G
Sbjct: 215 EMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQG 274

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++++ LL+ M      KPN   YN  ++  C  +   +   +M +M   G  P+  T+
Sbjct: 275 HVDQALDLLNTML----CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATF 330

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + + ++  QN   D A EV+ +ME  G +P+     III+   + G++ +ALR   +M  
Sbjct: 331 SMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV- 389

Query: 312 YGVHPNLVIFNLLIKGF-------------------------------VEIMDRDGV--- 337
               P+ + FN ++KGF                               ++ + ++G+   
Sbjct: 390 --CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNY 447

Query: 338 -DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             +V   M  +R  PD++TYS+++N +S  G ++   ++F  M     KPD  +Y+ + K
Sbjct: 448 ATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLK 504

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  R    E A EL+  M+     PN V F  +I+  C  G +DRAIEV ++M  +G +P
Sbjct: 505 GLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTP 564

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           ++ T+  L+ G+SE     R ++ L+++      P   ++                    
Sbjct: 565 DIFTYNALINGFSEQ---GRLDDALKLLSTMSCKPDAISY-------------------N 602

Query: 517 SKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPN 560
           S +K   R    +  E++  E L         T  Y N L +PN
Sbjct: 603 STLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFKYANHLLMPN 646



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 154/341 (45%), Gaps = 11/341 (3%)

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           ++NTL+ GY   G+  ++ ++L      G    N+ TY  L+  +C    + +A  ++  
Sbjct: 126 SHNTLVAGYCRDGRLADAERVLGAARATG--AANVVTYTALIDGYCRSGRLDDALRLIAS 183

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  +   PD  TYNT+        + ++AEE++ EM  N   PN  T    I  +C+ G 
Sbjct: 184 MPVA---PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGL 240

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           +  A++    M  YG  P++VI++ LI GF E   +  VD+ L L+      P+ + Y+ 
Sbjct: 241 LDRAVQLLDQMPRYGCTPDVVIYSTLINGFSE---QGHVDQALDLLNTMLCKPNTVCYNA 297

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
            +     A   +   E+  +M + G  P+   +S+L     +    + A E+L  M + G
Sbjct: 298 ALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYG 357

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P+ V +  II+     G +D A+ + + M      P+   F  ++ G+  A +   A 
Sbjct: 358 CEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDAS 414

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           E++  M        + TF +L +     GL   A ++  ++
Sbjct: 415 ELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQM 455



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 58/204 (28%), Positives = 105/204 (51%), Gaps = 13/204 (6%)

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG----VDEV 340
           +C I+I   C  G++ +A R    +K      + V  N L+ G+     RDG     + V
Sbjct: 92  SCNILIKKLCATGRLADAERVLDALKAAAAA-DAVSHNTLVAGYC----RDGRLADAERV 146

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L   +      +V+TY+ +++ +  +G +D    +   M    + PD + Y+ + KG   
Sbjct: 147 LGAARATGA-ANVVTYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCI 202

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
            ++ E+AEEL+  MI +   PN V F T I  +C +G +DRA+++ D+M  +G +P++  
Sbjct: 203 AKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVI 262

Query: 461 FETLMWGYSEARQPWRAEEILQIM 484
           + TL+ G+SE     +A ++L  M
Sbjct: 263 YSTLINGFSEQGHVDQALDLLNTM 286


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 120/487 (24%), Positives = 227/487 (46%), Gaps = 38/487 (7%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           K +N   +  K  E+     +++  G+KP ++  T L+      K+      +M  +E++
Sbjct: 82  KTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKH 141

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  PD   +NAVI+ F ++  ++ A     +MK+ G  P   TYN LI  +   G+ + +
Sbjct: 142 G-KPDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLA 200

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++++D + ++ N KP + TY +L+ A   +  I EA  ++ +M + G++PD  TYN +  
Sbjct: 201 LRVMDQLLKD-NCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVN 259

Query: 257 AYAQNGEADQAEEVIVEMEHN-----------------------------------GVQP 281
              + G  D+A E +  +  N                                   G +P
Sbjct: 260 GMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEP 319

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N  T   +I+  C++GKI EA    + MKE  + P+   ++ LI         D   E L
Sbjct: 320 NPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFL 379

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M      PD+++Y++I+ +    G  D+   IF+ +G+ G  P+A +Y+ L       
Sbjct: 380 DDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSS 439

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE-HGVSPNLKT 460
            +  +A  +++ M+ +G  P+ + + ++IS  C DG +D+AIE+   M E     P + +
Sbjct: 440 GDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFESEKCQPTVIS 499

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           + T++ G  + ++   A E+L  M   G  P ++T+ LL +     G   +A  + + + 
Sbjct: 500 YNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLV 559

Query: 521 NKERTNE 527
           N +  +E
Sbjct: 560 NMDAISE 566


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 214/437 (48%), Gaps = 1/437 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A  +F ++ E    PS+V ++ LL A+   K++ ++ S+   +E  G+  D   F+
Sbjct: 53  KFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLYSFS 112

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I+ F     +  A+    KM + G  P+  T+ +L+ G+    + +E++ L+D +   
Sbjct: 113 TLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQIVGL 172

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +PN+  YN ++ + C  + +  A +V++ M   G++PDV+TYN++ T    +G+   
Sbjct: 173 G-YEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKWGV 231

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           +  ++ +M   G+ P+  T   +I  + KEG++ EA +    M +  V PN+V +N LI 
Sbjct: 232 SARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSLIN 291

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           G       D   +VL  M      P+ +TY+T++N +  +  +D   +I   M   G+  
Sbjct: 292 GLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGVDG 351

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   Y+ L +GY +  +   AE++L  M+  G  P++  F  ++ G C  G +++A+   
Sbjct: 352 DTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALVKL 411

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           + + +      + T+  ++ G  +A +   A  +   +   GV P   T+  +    R  
Sbjct: 412 EDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLRRK 471

Query: 507 GLTKEAKRILSKIKNKE 523
            L  EA  +  K+K  +
Sbjct: 472 RLWLEAHELYRKMKKDD 488



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/339 (23%), Positives = 149/339 (43%), Gaps = 35/339 (10%)

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           Y   +R+  +     +A  +   MA S   P +V ++ +  A A+  + +    +   +E
Sbjct: 41  YRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIE 100

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE----- 330
             G+  +  +   +I  +C+  ++  AL     M + G  P++V F  L+ GF       
Sbjct: 101 ILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQ 160

Query: 331 -----------------------IMDR-------DGVDEVLALMKEFRVNPDVITYSTIM 360
                                  I+D        D   +VL  M++  + PDVITY++++
Sbjct: 161 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLI 220

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
                +G       I  DM + GI PD   +S +   + +E +  +A++    MI+    
Sbjct: 221 TRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVD 280

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN+V + ++I+G C  G +D A +V + M   G  PN  T+ TL+ GY ++++   A +I
Sbjct: 281 PNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKI 340

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           L +M   GV     T+  L +     G    A+++L+++
Sbjct: 341 LCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARM 379



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 52/246 (21%), Positives = 91/246 (36%), Gaps = 72/246 (29%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR--------- 122
           + +   L+N L   G   EA+ + N ++  G  P+ VTY TL+      KR         
Sbjct: 283 IVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILC 342

Query: 123 --------------------------FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESG 156
                                     FN+   +++++   G+ PD   FN +++   E G
Sbjct: 343 VMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHG 402

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            +E+A+     +++S       TYN +IKG   A K E                      
Sbjct: 403 KIEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVE---------------------- 440

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM-E 275
                         +AW +   +A  G+ PDV+TY T+     +     +A E+  +M +
Sbjct: 441 --------------DAWYLFCSLALKGVSPDVITYTTMMIGLRRKRLWLEAHELYRKMKK 486

Query: 276 HNGVQP 281
            +G+ P
Sbjct: 487 DDGLMP 492


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 215/444 (48%), Gaps = 2/444 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T  +  L   G+  EA  I   + + G  P +VTYT L+ AL    + +    +  
Sbjct: 264 IYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFV 323

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++ +   PD + +  +++ FS+ G++    + + +M+  G  P   T+  L+     AG
Sbjct: 324 KMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAG 383

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+  LLD+M ++G V PNL TYN L+        + +A ++ + M   G+ P   TY
Sbjct: 384 NIDEAFHLLDVMRKQG-VLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTY 442

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
                 Y ++G +D+A E   +M+  G+ PN   C   +    + G+++EA      +K 
Sbjct: 443 ILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKS 502

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P+ V +N+++K + +    D   E+L+ M E +  PD+I  ++++N    AG +D+
Sbjct: 503 NGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDE 562

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++F  +    + P    Y+ L  G  +E + ++A EL  +M  +G  PN + F TI+ 
Sbjct: 563 AWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILD 622

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             C +  +D A+++  KM      P++ TF T++ G    ++   A  +   MK   + P
Sbjct: 623 CLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTP 681

Query: 492 QKSTFLLLAEARRATGLTKEAKRI 515
              T   L       GL ++A +I
Sbjct: 682 DCVTLCTLLPGVVKNGLMEDAFKI 705



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 208/462 (45%), Gaps = 36/462 (7%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R + +   +   L  RG  ++    F  + E G   +  +Y  L+  L           +
Sbjct: 157 RDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEM 216

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++   G+ P    F+A++ A  +  + E       +M+  GL P   TY   I+  G 
Sbjct: 217 YRRMVLEGLKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGR 276

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           AG+ +E+ +++  M  +G   P++ TY VL+ A C    + +A  +  KM AS  KPD V
Sbjct: 277 AGRIDEACRIMKRMEDDG-CGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRV 335

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY T+   ++  G+  + +E   EME +G  P+  T  I+++  CK G I EA      M
Sbjct: 336 TYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVM 395

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           ++ GV PNL  +N LI G + +   D   ++   M+   V P   TY   ++ +  +G  
Sbjct: 396 RKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRS 455

Query: 370 DKCKEIFD----------------------DMGKA-------------GIKPDAHAYSIL 394
           DK  E F+                      +MG+              G+ PD+  Y+++
Sbjct: 456 DKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMM 515

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            K Y +  + ++A ELL  M E+   P++++  ++I+     G +D A ++F ++ +  +
Sbjct: 516 MKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKL 575

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           +P + T+ TL+ G  +  Q  RA E+   M   G  P   TF
Sbjct: 576 APTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITF 617



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 131/550 (23%), Positives = 231/550 (42%), Gaps = 107/550 (19%)

Query: 79   MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
            + SL E G+ +EA+ IFN L   G  P  VTY  ++   +   + +    ++S + EN  
Sbjct: 481  LYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQC 540

Query: 139  DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            +PD I  N++IN   ++G ++EA   F ++K+  L PT  TYNTLI G G  G+ + +++
Sbjct: 541  EPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAME 600

Query: 199  LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT----- 253
            L   M+  G   PN  T+N ++   C    +  A  +++KM      PDV+T+NT     
Sbjct: 601  LFASMTGNG-CPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGL 659

Query: 254  -----------------------------IATAYAQNGEADQAEEVIVEMEH-------- 276
                                         +     +NG  + A ++  +  H        
Sbjct: 660  VIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDR 719

Query: 277  -------NGVQPNGRTCGIIISG-------YCKEGKI-----------KEALR----FAR 307
                    G+     T   I+ G        CK+G +           K+AL     F R
Sbjct: 720  RFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIR 779

Query: 308  TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
              KE GV P L  +N LI+GF+ + + +    +   MK     PDV TY+ +++A   +G
Sbjct: 780  FTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSG 839

Query: 368  -----------------------------------FMDKCKEIFDDMGKAGIKPDAHAYS 392
                                                +DK  ++F D+      P    Y 
Sbjct: 840  KINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYG 899

Query: 393  ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
             L  G ++    E+A+EL   M++ G  PN  I+  +I+G+   G ++ A E+F +M   
Sbjct: 900  PLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVRE 959

Query: 453  GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            G+ P+LK++ +L+    EA +   A    + +K  G++     + L+ +    +   +EA
Sbjct: 960  GIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEA 1019

Query: 513  KRILSKIKNK 522
              +  +++++
Sbjct: 1020 LTLYDEMQSR 1029



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 220/469 (46%), Gaps = 19/469 (4%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTT-----LLAALTIQKRFNSIH 127
           + +  ++NS+++   P +A + FN++ E       V +TT     +L  L I +R   + 
Sbjct: 92  KEVMAVLNSILD---PTDAFSYFNSVAE----MPFVVHTTETCNHMLEILRIHRRVGDMV 144

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            + + ++   +  D   +  +       G + +    F KM+E+G      +YN LI   
Sbjct: 145 VVFNLMQNQIIKRDLNTYLIIFKGLFIRGGLRQTPFAFGKMREAGFHLNAYSYNGLIHLL 204

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
             +G   E++++   M  EG +KP+L+T++ L+ A    ++     +++ +M + G+KP+
Sbjct: 205 LQSGLCREALEMYRRMVLEG-LKPSLKTFSALMVATGKRRDTETVKSLLEEMESLGLKPN 263

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           + TY        + G  D+A  ++  ME +G  P+  T  ++I   C  GK+ +A+    
Sbjct: 264 IYTYTICIRVLGRAGRIDEACRIMKRMEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFV 323

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            MK     P+ V +  ++  F +  D   V E  + M+     PDVIT++ ++NA   AG
Sbjct: 324 KMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFWSEMEADGYAPDVITFTILVNALCKAG 383

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +D+   + D M K G+ P+ H Y+ L  G +R    + A +L   M   G  P    + 
Sbjct: 384 NIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLFNNMETLGVVPTAYTYI 443

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
             I  +   G  D+A+E F+KM   G++PN+      ++  +E  +   A+ I   +K+ 
Sbjct: 444 LFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSN 503

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPV 536
           G+ P   T+ ++ +     G   EA  +LS +      +E + E DI V
Sbjct: 504 GLAPDSVTYNMMMKCYSKAGQVDEAIELLSDM------SENQCEPDIIV 546



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 161/328 (49%), Gaps = 1/328 (0%)

Query: 169  KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
            KE G+ PT  +YN LI+G+      E +  L   M   G   P++ TYN+L+ A      
Sbjct: 782  KELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAG-CAPDVFTYNLLLDAHGKSGK 840

Query: 229  ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
            I E + +  +M  S  KP+ +T+N I     ++   D+A ++  ++      P   T G 
Sbjct: 841  INELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGP 900

Query: 289  IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
            ++ G  K G+++EA      M +YG  PN  I+N+LI GF +  D +   E+   M    
Sbjct: 901  LLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREG 960

Query: 349  VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
            + PD+ +Y++++     AG +D     F+ + + G+  D+ AY+++  G  R    E+A 
Sbjct: 961  IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEAL 1020

Query: 409  ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
             L   M   G +P++  + ++I      G +++A ++++++   G+ PN+ T+  L+ GY
Sbjct: 1021 TLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGY 1080

Query: 469  SEARQPWRAEEILQIMKAFGVHPQKSTF 496
            S +     A  + + M   G  P   TF
Sbjct: 1081 SMSGNSDSAYAVYKRMMVGGCSPNTGTF 1108



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 112/495 (22%), Positives = 209/495 (42%), Gaps = 75/495 (15%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M++  C   +  +  L+N+L + G+  EA  +F  L +    P++VTY TL+A L  + +
Sbjct: 535 MSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQ 594

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 + + +  NG  P++I FN +++   ++  ++ A+   +KM      P   T+NT
Sbjct: 595 VQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNT 654

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G  I                                    EK +++A  + H+M   
Sbjct: 655 IIHGLVI------------------------------------EKRVSDAIWLFHQMKKM 678

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH---------------NGVQPNGRTCG 287
            + PD VT  T+     +NG  + A ++  +  H                G+     T  
Sbjct: 679 -LTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEK 737

Query: 288 IIISG-------YCKEGKI-----------KEAL----RFARTMKEYGVHPNLVIFNLLI 325
            I+ G        CK+G +           K+AL     F R  KE GV P L  +N LI
Sbjct: 738 TILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLI 797

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           +GF+ + + +    +   MK     PDV TY+ +++A   +G +++  E+++ M  +  K
Sbjct: 798 EGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCK 857

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P+   ++I+    V+    +KA +L   ++   F P    +  ++ G    G ++ A E+
Sbjct: 858 PNTITHNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKEL 917

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F++M ++G  PN   +  L+ G+ +      A E+ + M   G+ P   ++  L      
Sbjct: 918 FEEMVDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCE 977

Query: 506 TGLTKEAKRILSKIK 520
            G   +A     K+K
Sbjct: 978 AGRVDDALHYFEKLK 992



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 105/490 (21%), Positives = 212/490 (43%), Gaps = 45/490 (9%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            TV +   L+  L + G+ Q A  +F ++   G  P+ +T+ T+L  L      +    ++
Sbjct: 578  TVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKML 637

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++      PD + FN +I+       + +A+  F +MK+  LTP   T  TL+ G    
Sbjct: 638  YKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKM-LTPDCVTLCTLLPGVVKN 696

Query: 191  GKPEESVKLL-DLMSREGNVKPNLRTYNVL------------------------------ 219
            G  E++ K+  D + R G V  + R +  L                              
Sbjct: 697  GLMEDAFKIAEDFVHRLG-VYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGS 755

Query: 220  -----VRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
                 ++  C  K    A +V  +     G+KP + +YN +   +      + A  +  E
Sbjct: 756  VLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTE 815

Query: 274  MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
            M++ G  P+  T  +++  + K GKI E       M      PN +  N++I   V+   
Sbjct: 816  MKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVK--- 872

Query: 334  RDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
             + +D+ L L  +      +P   TY  +++    +G +++ KE+F++M   G +P+   
Sbjct: 873  SNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAI 932

Query: 391  YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
            Y+IL  G+ +  +   A EL   M+  G  P++  +T+++   C  G +D A+  F+K+ 
Sbjct: 933  YNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLK 992

Query: 451  EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
            + G+  +   +  ++ G   + +   A  +   M++ G++P   T+  L       G+ +
Sbjct: 993  QTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVE 1052

Query: 511  EAKRILSKIK 520
            +A ++  +++
Sbjct: 1053 QAGKLYEELQ 1062



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 66/284 (23%), Positives = 133/284 (46%), Gaps = 1/284 (0%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L+++  + GK  E   ++  +I    KP+ +T+  ++A L      +    +   +    
Sbjct: 831  LLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVSGD 890

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              P    +  +++   +SG +EEA + F +M + G  P  + YN LI G+G  G    + 
Sbjct: 891  FSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNTAC 950

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L   M REG ++P+L++Y  LV   C    + +A +   K+  +G+  D + YN +   
Sbjct: 951  ELFKRMVREG-IRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDG 1009

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
              ++   ++A  +  EM+  G+ P+  T   +I      G +++A +    ++  G+ PN
Sbjct: 1010 LGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPN 1069

Query: 318  LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
            +  +N LI+G+    + D    V   M     +P+  T++ + N
Sbjct: 1070 VFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQLPN 1113



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/154 (25%), Positives = 74/154 (48%), Gaps = 2/154 (1%)

Query: 64   MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
            M +E  R  ++S T L+  L E G+  +A   F  L + G     + Y  ++  L    R
Sbjct: 956  MVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHR 1015

Query: 123  FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 ++  +++  G++PD   +N++I     +G +E+A   + +++  GL P   TYN 
Sbjct: 1016 IEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNA 1075

Query: 183  LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            LI+GY ++G  + +  +   M   G   PN  T+
Sbjct: 1076 LIRGYSMSGNSDSAYAVYKRM-MVGGCSPNTGTF 1108


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 204/418 (48%), Gaps = 19/418 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS----------IH 127
           +++++ E+G   E   +   L   G +P +V+Y  +L  L + KR++           +H
Sbjct: 184 VVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVH 243

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
             +SQ+ E+G  PD   +  +I+   + G+ E A D   +M   GL P    YNT++KG 
Sbjct: 244 EALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGL 303

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
             A + EE+  LL  M +E +   +  T+N+LV  +C    +     ++ +M   G  PD
Sbjct: 304 CSAERWEEAEDLLAEMFQE-DCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPD 362

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           V+TY T+   + + G  D+A  ++  M   G +PN  +  I++ G C+  +  +A     
Sbjct: 363 VITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELIS 422

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE-VLALMKEFRVN---PDVITYSTIMNAW 363
            M + G  PN V FN LI      M + G+ E  + L+K+  VN   PD+I+YST+++  
Sbjct: 423 HMIQQGCLPNPVTFNTLIN----FMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGL 478

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
             AG  ++  E+ + M   GI P+   YS +A    RE   +K  ++  ++ ++    + 
Sbjct: 479 GKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDA 538

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            ++  +IS  C     DRAI+ F  M  +G  PN  T+  L+ G +       A+++L
Sbjct: 539 ALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLL 596



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/493 (24%), Positives = 220/493 (44%), Gaps = 54/493 (10%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           ++ L+ SL   G+  +A    +     G    +V Y  ++A      R   + +      
Sbjct: 47  LSALIRSLCAAGRTADAARALDT---AGDAAGVVAYNAMIAGYC---RAGQVAAARRLAA 100

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
              + P++  +  ++ +    G + +A+    +M   G   T    + +++     G   
Sbjct: 101 AVPVPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFR 160

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            +V+ L ++  +G    +    N++V A C +  + E   ++ K+ + G +PD+V+YN +
Sbjct: 161 SAVRALQVLHAKGCTLDS-GNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAV 219

Query: 255 ATAYAQNGEADQAEEVIVEM-----------EHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
                     D  EE++VEM           EH G  P+ R    II G CK+G  + A 
Sbjct: 220 LKGLCMAKRWDDVEELMVEMVRVHEALSQMPEH-GCTPDLRMYATIIDGICKDGHHEVAN 278

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGF-------------------------------VEIM 332
                M  YG+ PN+V +N ++KG                                V+  
Sbjct: 279 DILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFF 338

Query: 333 DRDG-VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            ++G VD V+ L   M E    PDVITY+T++N +   G +D+   +  +M   G KP+ 
Sbjct: 339 CQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNT 398

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
            +Y+I+ KG  R +    A+EL+  MI+ G  PN V F T+I+  C  G  ++AIE+  +
Sbjct: 399 ISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQ 458

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M  +G SP+L ++ T++ G  +A +   A E+L +M   G+ P    +  +A A    G 
Sbjct: 459 MLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGR 518

Query: 509 TKEAKRILSKIKN 521
           T +  ++   I++
Sbjct: 519 TDKIIQMFDSIQD 531



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 178/379 (46%), Gaps = 36/379 (9%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +R    +++ + + G  + A  I + +   G KP++V Y T+L  L   +R+     +++
Sbjct: 258 LRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLA 317

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +     D + FN +++ F ++G ++  ++   +M E G  P   TY T+I G+   G
Sbjct: 318 EMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEG 377

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+V LL  MS  G  KPN  +Y ++++  C  +   +A  ++  M   G  P+ VT+
Sbjct: 378 LVDEAVMLLKNMSACG-CKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTF 436

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+     + G A+QA E++ +M  NG  P+  +   +I G  K GK +EAL     M  
Sbjct: 437 NTLINFMCKKGLAEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMIN 496

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN +I                                   YS++ +A S  G  DK
Sbjct: 497 KGITPNTII-----------------------------------YSSMASALSREGRTDK 521

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++FD +  A ++ DA  Y+ +     +  E ++A +    M+ +G  PN   +T +I 
Sbjct: 522 IIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIR 581

Query: 432 GWCSDGSMDRAIEVFDKMC 450
           G  S+G +  A ++  ++C
Sbjct: 582 GLASEGLVREAQDLLSELC 600



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 78/147 (53%), Gaps = 1/147 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + +++ L + GK +EA  + N +I  G  P+ + Y+++ +AL+ + R + I  +   +
Sbjct: 470 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSI 529

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++  +  D+  +NAVI++  +    + A+D F  M  +G  P  STY  LI+G    G  
Sbjct: 530 QDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLV 589

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVL 219
            E+  LL +L SR    K  +R + ++
Sbjct: 590 REAQDLLSELCSRRAVRKHLVRHFGIV 616



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/202 (21%), Positives = 87/202 (43%), Gaps = 34/202 (16%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T ++  L    +  +AQ + +++I+ G  P+ VT+ TL+  +  +        ++ Q+
Sbjct: 400 SYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQM 459

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             NG  PD I ++ VI+   ++G  EEA++    M   G+TP T  Y+++       G+ 
Sbjct: 460 LVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRT 519

Query: 194 EESVKLLD--------------------LMSR--------------EGNVKPNLRTYNVL 219
           ++ +++ D                    L  R                   PN  TY +L
Sbjct: 520 DKIIQMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTIL 579

Query: 220 VRAWCNEKNITEAWNVMHKMAA 241
           +R   +E  + EA +++ ++ +
Sbjct: 580 IRGLASEGLVREAQDLLSELCS 601


>gi|255560884|ref|XP_002521455.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539354|gb|EEF40945.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 623

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/429 (25%), Positives = 207/429 (48%), Gaps = 36/429 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ + +  G  +E    F  ++E G  PS+++   LL  L    R +    +  ++   G
Sbjct: 185 LVKAYVREGMIKEGFTTFRKIVEVGCVPSVISCNCLLNGLLKLNRIDQCWQVYKEMARVG 244

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+S  FN + + F + G++++  D   +M+E G  P   TYNTLI  Y   G+ +++ 
Sbjct: 245 IHPNSYTFNILTHVFCQDGDVDKVNDFLERMEEEGFEPDIVTYNTLISCYCRKGRLDDAF 304

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L  +M R  NV P+L +Y  L+   C E  + EA  + H+M   G+ PD+V++NT+   
Sbjct: 305 YLYRIMYRR-NVLPDLVSYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICG 363

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G+  ++  ++ EM  +G+ P+  TC ++I GY KE +I  AL     ++ +GV  +
Sbjct: 364 YCKEGKMRESRSLLHEMIGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPIS 423

Query: 318 LVIFNLLI---------------------KGFV---EIMDR--------DGVDEVLALMK 345
             I++ L+                     +G+V   EI ++        D + + L +  
Sbjct: 424 TDIYDYLMVSICEEGRPFAAKSLLQRISQRGYVPGVEIYNKLIESLCKSDSIADALLVKS 483

Query: 346 EF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
           E     + P  ITY  ++          + + + ++M ++G+ PD      L   Y +E+
Sbjct: 484 EMGHRNIKPSAITYKALICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKER 543

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           +  KAE LL T  +     +   + T++  +C D    R +E+ D+M + G +PN++TF 
Sbjct: 544 DIGKAETLLQTFAKEFQIFDSESYNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFR 603

Query: 463 TLMWGYSEA 471
            ++ G  +A
Sbjct: 604 QMIHGLWKA 612



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/358 (24%), Positives = 164/358 (45%), Gaps = 19/358 (5%)

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWC 224
           W   + GL P+   Y  L+     + + +E++K L +L+    +   N   +  L+   C
Sbjct: 114 WVKNDLGLQPSIQNYCFLVHILAWSKEFKEAMKFLTELIKLVKDCSFNEDVFQTLLFC-C 172

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
            + N    W             D V ++ +  AY + G   +      ++   G  P+  
Sbjct: 173 QDCN----W-------------DPVIFDMLVKAYVREGMIKEGFTTFRKIVEVGCVPSVI 215

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           +C  +++G  K  +I +  +  + M   G+HPN   FN+L   F +  D D V++ L  M
Sbjct: 216 SCNCLLNGLLKLNRIDQCWQVYKEMARVGIHPNSYTFNILTHVFCQDGDVDKVNDFLERM 275

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
           +E    PD++TY+T+++ +   G +D    ++  M +  + PD  +Y+ L  G  +E + 
Sbjct: 276 EEEGFEPDIVTYNTLISCYCRKGRLDDAFYLYRIMYRRNVLPDLVSYTALMNGLCKEGKV 335

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            +A +L   MI  G +P++V F T+I G+C +G M  +  +  +M   G+ P+  T + L
Sbjct: 336 REAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEMIGSGICPDKVTCQVL 395

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           + GY +  +   A  ++  ++ FGV      +  L  +    G    AK +L +I  +
Sbjct: 396 IEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRPFAAKSLLQRISQR 453



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 150/305 (49%), Gaps = 3/305 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T LMN L + GK +EA  +F+ +I  G  P +V++ TL+     + +     S++ ++
Sbjct: 321 SYTALMNGLCKEGKVREAHQLFHRMIHRGLNPDIVSFNTLICGYCKEGKMRESRSLLHEM 380

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G+ PD +    +I  + +   +  A++   +++  G+  +T  Y+ L+      G+P
Sbjct: 381 IGSGICPDKVTCQVLIEGYRKEARIVSALNLVVELERFGVPISTDIYDYLMVSICEEGRP 440

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +  LL  +S+ G V P +  YN L+ + C   +I +A  V  +M    +KP  +TY  
Sbjct: 441 FAAKSLLQRISQRGYV-PGVEIYNKLIESLCKSDSIADALLVKSEMGHRNIKPSAITYKA 499

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-KEY 312
           +     +   + +AE ++ EM  +G+ P+   C  ++  YCKE  I +A    +T  KE+
Sbjct: 500 LICCLCRTSRSMEAESLMEEMLQSGMLPDPDICRALMHVYCKERDIGKAETLLQTFAKEF 559

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
            +  +   +N L+K + E  D   + E+   M +    P++ T+  +++    A  ++K 
Sbjct: 560 QIFDSES-YNTLVKTYCEDADATRLMELQDRMLKVGFAPNIQTFRQMIHGLWKAMAVEKD 618

Query: 373 KEIFD 377
           K + +
Sbjct: 619 KLLLE 623


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/488 (23%), Positives = 231/488 (47%), Gaps = 40/488 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L + G   EA      +++ G   +L+TY+ L+  L   ++FN  +S++ 
Sbjct: 281 VVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLK 340

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +  E G  P+ + +N +I+ + + GN+ +A+     M   G+ P + T N++I+G+   G
Sbjct: 341 ETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIG 400

Query: 192 KPEESVKLLDLMSREG----------------------------------NVKPNLRTYN 217
           + E++  +L+ M   G                                  N++PN     
Sbjct: 401 QMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLT 460

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            LV   C E   ++A  +  ++   G   ++VT N +     + G   +A  ++ +M   
Sbjct: 461 TLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLER 520

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G   +  T   +ISG CKEGK++E  +    M + G+ P+   +NLLI G   I     +
Sbjct: 521 GFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRI---GKL 577

Query: 338 DEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           DE + L  E +   + P+V TY  +++ +  A  +++ +++F ++    ++ ++  Y+ L
Sbjct: 578 DEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTL 637

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            + Y R     +A +L   M   G  P    ++++I G C+ G M+ A  + D+M + G+
Sbjct: 638 IRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGL 697

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            PN+  +  L+ GY +  Q  +   +LQ M ++ +HP K T+ ++ +    +G  K A +
Sbjct: 698 LPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAK 757

Query: 515 ILSKIKNK 522
           +L ++  K
Sbjct: 758 LLHEMVGK 765



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 127/507 (25%), Positives = 225/507 (44%), Gaps = 52/507 (10%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ + + L+N L++  K  EA ++    +E G  P+ V Y TL+              I 
Sbjct: 315 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 374

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT---------------- 174
             +   G++P+S+  N++I  F + G ME+A     +M   G +                
Sbjct: 375 GDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMN 434

Query: 175 -------------------PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
                              P      TL+ G    GK  ++V+L   +  +G    NL T
Sbjct: 435 SRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG-FGANLVT 493

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
            N L+   C   N+ EA  ++ KM   G   D +TYNT+ +   + G+ ++  ++  EM 
Sbjct: 494 TNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMV 553

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
             G++P+  T  ++I G C+ GK+ EA+      K   + PN+  + ++I G+ +    D
Sbjct: 554 KQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCK---AD 610

Query: 336 GVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
            ++E   L  E     +  + + Y+T++ A+   G   +  ++ DDM   GI P    YS
Sbjct: 611 KIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYS 670

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            L  G       E A+ L+  M + G  PNVV +T +I G+C  G MD+ + V  +M  +
Sbjct: 671 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 730

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            + PN  T+  ++ GYS++     A ++L  M   G+ P   T+ +L       G  KE 
Sbjct: 731 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTN-----GFCKEG 785

Query: 513 KRILSKIKNKERTNEMEAEEDIPVESL 539
                KI+   +  +  ++E +P++ +
Sbjct: 786 -----KIEEGFKICDYMSQEGLPLDEI 807



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 206/443 (46%), Gaps = 10/443 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  ++    + G+ ++A+ I   ++  G   +   +TT++  L +  RF S    + ++
Sbjct: 388 TLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREM 447

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
               M P+      ++    + G   +A++ ++++ E G      T N LI G    G  
Sbjct: 448 LLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNM 507

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+V+LL  M   G V   + TYN L+   C E  + E + +  +M   G++PD  TYN 
Sbjct: 508 QEAVRLLKKMLERGFVLDKI-TYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNL 566

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G+ D+A  +  E +   + PN  T G++I GYCK  KI+E  +    +    
Sbjct: 567 LIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQN 626

Query: 314 VHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFM 369
           +  N V++N LI+ +     R+G   E   L  + R   + P   TYS++++     G M
Sbjct: 627 LELNSVVYNTLIRAYC----RNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRM 682

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +  K + D+M K G+ P+   Y+ L  GY +  + +K   +L  M     HPN + +T +
Sbjct: 683 EDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVM 742

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G+   G M  A ++  +M   G+ P+  T+  L  G+ +  +     +I   M   G+
Sbjct: 743 IDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGL 802

Query: 490 HPQKSTFLLLAEA-RRATGLTKE 511
              + T+  L    ++ + LT +
Sbjct: 803 PLDEITYTTLVHGWQQPSALTNQ 825



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 214/497 (43%), Gaps = 39/497 (7%)

Query: 62  FCMNKESCR---TVRSMTKLMNSLIERGKPQEAQAIFNNLIE------------------ 100
           F    +SC    T+RS   LM SLI  G    A+ +   LI+                  
Sbjct: 99  FYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEIA 158

Query: 101 ---------GGHKPSLVTYTTLLAALTIQKR---FNSIHSIMSQVEENGMDPDSIFFNAV 148
                    G    ++     L+     Q R   F +   +   +   G+ P       +
Sbjct: 159 SAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFL 218

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           +++  ++  +E++   F  M++ G++P    ++T I  +   GK E++++L   M + G 
Sbjct: 219 LSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLG- 276

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V PN+ TYN L+   C   N+ EA+    KM   G+   ++TY+ +     +  + ++A 
Sbjct: 277 VSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEAN 336

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            V+ E    G  PN      +I GYCK G + +ALR    M   G++PN V  N +I+GF
Sbjct: 337 SVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGF 396

Query: 329 VEIMDRDGVDEVL--ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
            +I   +  + +L   L + F +NP    ++TI++        +       +M    ++P
Sbjct: 397 CKIGQMEQAECILEEMLSRGFSINPG--AFTTIIHWLCMNSRFESALRFLREMLLRNMRP 454

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           +    + L  G  +E +   A EL   ++E GF  N+V    +I G C  G+M  A+ + 
Sbjct: 455 NDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLL 514

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            KM E G   +  T+ TL+ G  +  +     ++   M   G+ P   T+ LL       
Sbjct: 515 KKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRI 574

Query: 507 GLTKEAKRILSKIKNKE 523
           G   EA  + ++ K+++
Sbjct: 575 GKLDEAVNLWNECKSRD 591



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 52/231 (22%), Positives = 108/231 (46%), Gaps = 1/231 (0%)

Query: 63  CMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           C +++    V +   +++   +  K +E + +F  L+    + + V Y TL+ A      
Sbjct: 587 CKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGN 646

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +   +   G+ P +  ++++I+     G ME+A     +M++ GL P    Y  
Sbjct: 647 TVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTA 706

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY   G+ ++ V +L  MS   ++ PN  TY V++  +    ++  A  ++H+M   
Sbjct: 707 LIGGYCKLGQMDKVVNVLQEMSSY-DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 765

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
           G+ PD VTYN +   + + G+ ++  ++   M   G+  +  T   ++ G+
Sbjct: 766 GIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816


>gi|356530296|ref|XP_003533718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Glycine max]
          Length = 830

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 217/444 (48%), Gaps = 1/444 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           +L  + +  G   E  A+ + +   G  P+ +TYTT++ A     R +    + S++++ 
Sbjct: 362 ELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDL 421

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  P+   +N+V+    +    E+ +    +MK +G  P  +T+NT++      GK    
Sbjct: 422 GCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYV 481

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            K+L  M   G  +P+  T+N L+ ++    +  ++  +  +M  SG  P V TYN +  
Sbjct: 482 NKVLREMKNCG-FEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLN 540

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A A  G+   AE VI +M+  G +PN  +  +++  Y K G ++   +  + + +  V P
Sbjct: 541 ALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFP 600

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           + ++   L+    +     G++     ++++   PD++  +++++ +S      K +E+ 
Sbjct: 601 SWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREML 660

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             + + G++P+   Y+ L   YVRE E  KAEE+L  +  S   P+VV + T+I G+C  
Sbjct: 661 HFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCRK 720

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G M  AI V  +M   G+ P + T+ T + GY+       A E+++ M      P + T+
Sbjct: 721 GLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRFMIEHNCRPSELTY 780

Query: 497 LLLAEARRATGLTKEAKRILSKIK 520
            +L +     G  +EA   ++KIK
Sbjct: 781 KILVDGYCKAGKHEEAMDFVTKIK 804



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/437 (24%), Positives = 206/437 (47%), Gaps = 1/437 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   EA+     L   G+KP  V Y ++L        +    SI+ ++E+N   PDSI +
Sbjct: 301 GMLDEARKFLAELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITY 360

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +   +  +G ++E M     M   G+ P   TY T+I  YG AG+ +++++L   M  
Sbjct: 361 NELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKD 420

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G   PN+ TYN ++     +    +   V+ +M  +G  P+  T+NT+    ++ G+ +
Sbjct: 421 LG-CAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHN 479

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
              +V+ EM++ G +P+  T   +IS Y + G   ++ +    M + G  P +  +N L+
Sbjct: 480 YVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALL 539

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                  D    + V+  M+     P+  +YS +++ +S AG +   +++  ++    + 
Sbjct: 540 NALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVF 599

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P       L     + +     E     + + G+ P++V+  +++S +  +    +A E+
Sbjct: 600 PSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNKMFSKAREM 659

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
              + E G+ PNL T+  LM  Y    + W+AEE+L+ ++     P   ++  + +    
Sbjct: 660 LHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGIQNSVPEPDVVSYNTVIKGFCR 719

Query: 506 TGLTKEAKRILSKIKNK 522
            GL +EA R+LS++  K
Sbjct: 720 KGLMQEAIRVLSEMTTK 736



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 185/407 (45%), Gaps = 3/407 (0%)

Query: 67  ESCRTVRSMTKLMNSLIERGKPQE-AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           ++ R    + +LM  ++ R      A  +F+ +    +   +  YTT+L A     ++  
Sbjct: 175 QNLRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKR 234

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESG-NMEEAMDTFWKMKESGLTPTTSTYNTLI 184
              +  ++E  G+DP  + +N +++ + + G +    ++   +M+  GL     T +T+I
Sbjct: 235 AIDLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVI 294

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
              G  G  +E+ K L  +   G  KP    YN +++ +      TEA +++ +M  +  
Sbjct: 295 SACGREGMLDEARKFLAELKLNG-YKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNC 353

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            PD +TYN +A  Y + G  D+   VI  M   GV PN  T   +I  Y K G+  +ALR
Sbjct: 354 PPDSITYNELAATYVRAGFLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALR 413

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               MK+ G  PN+  +N ++    +    + V +VL  MK     P+  T++T++   S
Sbjct: 414 LFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCS 473

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G  +   ++  +M   G +PD   ++ L   Y R      + ++   M++SGF P V 
Sbjct: 474 EEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVT 533

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
            +  +++     G    A  V   M   G  PN  ++  L+  YS+A
Sbjct: 534 TYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKA 580



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 107/455 (23%), Positives = 214/455 (47%), Gaps = 20/455 (4%)

Query: 125 SIHSIMSQ------VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
           S HSI S+      VE+  +D  +  +  +++A++ SG  + A+D F KM+  GL PT  
Sbjct: 195 SQHSIASKLFDLIPVEKYSLDVRA--YTTILHAYARSGKYKRAIDLFDKMEGIGLDPTLV 252

Query: 179 TYNTLIKGYGIAGKPEESV-KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
           TYN ++  YG  G+    + +LLD M  +G ++ +  T + ++ A   E  + EA   + 
Sbjct: 253 TYNVMLDVYGKMGRSWGRILELLDEMRSKG-LEFDEFTCSTVISACGREGMLDEARKFLA 311

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           ++  +G KP  V YN++   + + G   +A  ++ EME N   P+  T   + + Y + G
Sbjct: 312 ELKLNGYKPGTVMYNSMLQVFGKAGIYTEALSILKEMEDNNCPPDSITYNELAATYVRAG 371

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
            + E +    TM   GV PN + +  +I  + +    D    + + MK+    P+V TY+
Sbjct: 372 FLDEGMAVIDTMTSKGVMPNAITYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYN 431

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           +++         +   ++  +M   G  P+   ++ +      E +     ++L  M   
Sbjct: 432 SVLAMLGKKSRTEDVIKVLCEMKLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNC 491

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR- 476
           GF P+   F T+IS +   GS   + +++ +M + G +P + T+  L+   +  R  W+ 
Sbjct: 492 GFEPDKDTFNTLISSYARCGSEVDSAKMYGEMVKSGFTPCVTTYNALLNALAH-RGDWKA 550

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE--------RTNEM 528
           AE ++Q M+  G  P ++++ LL       G  +  +++  +I + +        RT  +
Sbjct: 551 AESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVL 610

Query: 529 EAEEDIPVESLERLYHKEATTASYPNLLQIPNVVS 563
              +   +  +ER + +       P+L+ I +++S
Sbjct: 611 SNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLS 645



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 95/426 (22%), Positives = 189/426 (44%), Gaps = 36/426 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++++  + G+  +A  +F+ + + G  P++ TY ++LA L  + R   +  ++ ++
Sbjct: 394 TYTTVIDAYGKAGREDDALRLFSKMKDLGCAPNVYTYNSVLAMLGKKSRTEDVIKVLCEM 453

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + NG  P+   +N ++   SE G          +MK  G  P   T+NTLI  Y   G  
Sbjct: 454 KLNGCAPNRATWNTMLAVCSEEGKHNYVNKVLREMKNCGFEPDKDTFNTLISSYARCGSE 513

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            +S K+   M + G   P + TYN L+ A  +  +   A +V+  M   G KP+  +Y+ 
Sbjct: 514 VDSAKMYGEMVKSG-FTPCVTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSL 572

Query: 254 IATAYAQNGEADQAEEV-----------------------------------IVEMEHNG 278
           +   Y++ G     E+V                                     +++  G
Sbjct: 573 LLHCYSKAGNVRGIEKVEKEIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYG 632

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
            +P+      ++S + +     +A      + E G+ PNL  +N L+  +V   +    +
Sbjct: 633 YKPDLVVINSMLSMFSRNKMFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAE 692

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           EVL  ++     PDV++Y+T++  +   G M +   +  +M   GI+P    Y+    GY
Sbjct: 693 EVLKGIQNSVPEPDVVSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGY 752

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
              +  ++A E++  MIE    P+ + +  ++ G+C  G  + A++   K+ E  +S + 
Sbjct: 753 AGMELFDEANEVIRFMIEHNCRPSELTYKILVDGYCKAGKHEEAMDFVTKIKEIDISFDD 812

Query: 459 KTFETL 464
           K+ + L
Sbjct: 813 KSVKRL 818



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/281 (25%), Positives = 128/281 (45%), Gaps = 42/281 (14%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI-- 129
           V +   L+N+L  RG  + A+++  ++   G KP+  +Y+ LL   +       I  +  
Sbjct: 532 VTTYNALLNALAHRGDWKAAESVIQDMQTKGFKPNETSYSLLLHCYSKAGNVRGIEKVEK 591

Query: 130 ---------------------------------MSQVEENGMDPDSIFFNAVINAFSESG 156
                                              Q+++ G  PD +  N++++ FS + 
Sbjct: 592 EIYDGQVFPSWILLRTLVLSNHKCRHLRGMERAFDQLQKYGYKPDLVVINSMLSMFSRNK 651

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGY---GIAGKPEESVKLLDLMSREGNVKPNL 213
              +A +    + E GL P   TYN L+  Y       K EE +K +    +    +P++
Sbjct: 652 MFSKAREMLHFIHECGLQPNLFTYNCLMDLYVREDECWKAEEVLKGI----QNSVPEPDV 707

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            +YN +++ +C +  + EA  V+ +M   G++P +VTYNT  + YA     D+A EVI  
Sbjct: 708 VSYNTVIKGFCRKGLMQEAIRVLSEMTTKGIQPTIVTYNTFLSGYAGMELFDEANEVIRF 767

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
           M  +  +P+  T  I++ GYCK GK +EA+ F   +KE  +
Sbjct: 768 MIEHNCRPSELTYKILVDGYCKAGKHEEAMDFVTKIKEIDI 808



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 68/138 (49%), Gaps = 1/138 (0%)

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           ++ D     ++ +   RE +   A +L   +    +  +V  +TTI+  +   G   RAI
Sbjct: 177 LRLDNQVVELMVRILGRESQHSIASKLFDLIPVEKYSLDVRAYTTILHAYARSGKYKRAI 236

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPW-RAEEILQIMKAFGVHPQKSTFLLLAEA 502
           ++FDKM   G+ P L T+  ++  Y +  + W R  E+L  M++ G+   + T   +  A
Sbjct: 237 DLFDKMEGIGLDPTLVTYNVMLDVYGKMGRSWGRILELLDEMRSKGLEFDEFTCSTVISA 296

Query: 503 RRATGLTKEAKRILSKIK 520
               G+  EA++ L+++K
Sbjct: 297 CGREGMLDEARKFLAELK 314


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 214/444 (48%), Gaps = 10/444 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N+    G  ++A  +F  + E G +P++  Y  LL A+  + RF  I  I S ++ +G
Sbjct: 120 VINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDG 179

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            +P+   +N ++ A  ++  ++ A     +M   G  P   +Y T+I      GK EE+ 
Sbjct: 180 KEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA- 238

Query: 198 KLLDLMSREGNVK--PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
                  RE +++  PN+  YN L+  +C E  + E + ++ +M   G+ P+V+TY+T+ 
Sbjct: 239 -------RELSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVI 291

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           ++ +  G  + A  V  +M   G  PN  T   ++ GY   G++ EAL     M E G  
Sbjct: 292 SSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFE 351

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN+V +N LI G            V + M+    +P+V TY  +++ ++ AG +    EI
Sbjct: 352 PNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEI 411

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           ++ M   G  P+   Y+ +     R     +A  L+  M      PN V F T I G C 
Sbjct: 412 WNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCC 471

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G ++ AI +F +M ++G SPN+KT+  ++ G  +  +   A E++  M+  G+     T
Sbjct: 472 SGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVT 531

Query: 496 FLLLAEARRATGLTKEAKRILSKI 519
           +  +       G  +EA ++L K+
Sbjct: 532 YNTIFGGFCNVGKFEEALKLLGKM 555



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 206/449 (45%), Gaps = 6/449 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV+    L+++++   + Q  + I++N+   G +P++ TY  LL AL    R +    ++
Sbjct: 148 TVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKLL 207

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G +PD + +  VI++ S+ G +EEA +   + +     P  S YN LI G+   
Sbjct: 208 VEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQ-----PNVSVYNALINGFCRE 262

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K +E   LL  M  +G + PN+ TY+ ++ +     N+  A  V  KM   G  P+V T
Sbjct: 263 YKVKEVFLLLGQMVEKG-IDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYT 321

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           + ++   Y   G   +A  +   M   G +PN      +I G C  GK+ EA+  +  M+
Sbjct: 322 FTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKME 381

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PN+  +  LI GF +  D  G  E+   M      P+V+ Y++++N    +    
Sbjct: 382 RNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFS 441

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   + + M      P+   ++   KG       E A  L   M + G  PN+  +  ++
Sbjct: 442 QAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVL 501

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G   +  +  A+E+  +M E G+  NL T+ T+  G+    +   A ++L  M   GV 
Sbjct: 502 DGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVK 561

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
           P   T+  L  A    G  K A ++L K+
Sbjct: 562 PDAITYNTLTYAYCMQGKVKTAIQLLDKL 590



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 109/412 (26%), Positives = 192/412 (46%), Gaps = 41/412 (9%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           +TY  ++  L  +   + +  ++ Q++  G+      F  VIN +   G  E+A+  F++
Sbjct: 80  LTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYR 139

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           ++E G  PT   YN L+       + +    +   M R+G  +PN+ TYN+L++A C   
Sbjct: 140 IREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGK-EPNVYTYNILLKALCKNN 198

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
            +  A  ++ +M+  G +PDVV+Y T+ ++ ++ G+ ++A E+ +       QPN     
Sbjct: 199 RVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF-----QPNVSVYN 253

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
            +I+G+C+E K+KE       M E G+ PN                              
Sbjct: 254 ALINGFCREYKVKEVFLLLGQMVEKGIDPN------------------------------ 283

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
                VITYST++++ S  G ++    ++  M   G  P+ + ++ L KGY       +A
Sbjct: 284 -----VITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEA 338

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +   M E GF PNVV + T+I G CS G M  A+ V  KM  +G SPN+ T+  L+ G
Sbjct: 339 LNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDG 398

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +++A     A EI   M   G  P    +  +      + +  +A  ++ K+
Sbjct: 399 FAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKM 450



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/444 (25%), Positives = 213/444 (47%), Gaps = 49/444 (11%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+ + C   V S T +++S+ + GK +EA+ +         +P++  Y  L+     + +
Sbjct: 210 MSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRF-----QPNVSVYNALINGFCREYK 264

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
              +  ++ Q+ E G+DP+ I ++ VI++ S  GN+E A+  + KM   G +P   T+ +
Sbjct: 265 VKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTS 324

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+KGY + G+  E++ + + M+ EG  +PN+  YN L+   C+   + EA +V  KM  +
Sbjct: 325 LMKGYFMRGRVLEALNIWNRMAEEG-FEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERN 383

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV----------------------- 279
           G  P+V TY  +   +A+ G+   A E+  +M  NG                        
Sbjct: 384 GCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQA 443

Query: 280 ------------QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
                        PN  T    I G C  G+++ A+     M++YG  PN+  +N ++ G
Sbjct: 444 WSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDG 503

Query: 328 FVEIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
              ++  + + E L L   M+E  +  +++TY+TI   +   G  ++  ++   M   G+
Sbjct: 504 ---LLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGV 560

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESG-FHPNVVIFTTIISGWCSDGSMDRAI 443
           KPDA  Y+ L   Y  + + + A +LL  +   G + P V  +T+++ G C+   ++ A+
Sbjct: 561 KPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAV 620

Query: 444 EVFDKMCEHGVSPNLKTFETLMWG 467
              DKM   G+  N  T+  L+ G
Sbjct: 621 LYLDKMLNEGICLNAATWNALVRG 644



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 139/280 (49%), Gaps = 3/280 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C   V +   L++   + G    A  I+N ++  G  P++V YT+++  L     
Sbjct: 380 MERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSM 439

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F+   S++ ++  +   P+++ FN  I     SG +E A++ F +M++ G +P   TYN 
Sbjct: 440 FSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNE 499

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           ++ G     + +E+++L+  M  +G ++ NL TYN +   +CN     EA  ++ KM   
Sbjct: 500 VLDGLLKENRIKEALELVTEMEEKG-MELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVG 558

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV-QPNGRTCGIIISGYCKEGKIKE 301
           G+KPD +TYNT+  AY   G+   A +++ ++   G   P       ++ G C +  ++E
Sbjct: 559 GVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEE 618

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           A+ +   M   G+  N   +N L++G    +   G   +L
Sbjct: 619 AVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHIL 658



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 142/306 (46%), Gaps = 5/306 (1%)

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TY +++     E ++     ++ +M   G+      +  +   Y + G A+QA ++   +
Sbjct: 81  TYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAEQALKMFYRI 140

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G QP  +    ++     E + +        MK  G  PN+  +N+L+K   +    
Sbjct: 141 REFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRV 200

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           DG  ++L  M      PDV++Y+T++++ S  G +++ +E+         +P+   Y+ L
Sbjct: 201 DGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----SIRFQPNVSVYNAL 255

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G+ RE + ++   LL  M+E G  PNV+ ++T+IS     G+++ A+ V+ KM   G 
Sbjct: 256 INGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGC 315

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
           SPN+ TF +LM GY    +   A  I   M   G  P    +  L     + G   EA  
Sbjct: 316 SPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVS 375

Query: 515 ILSKIK 520
           + SK++
Sbjct: 376 VSSKME 381


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 225/470 (47%), Gaps = 9/470 (1%)

Query: 57  QTHCSFC--MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL 114
           + HC F   M +     +     ++  L +  +  +A++I   +++ G  P L TY+ ++
Sbjct: 228 KAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLII 287

Query: 115 AALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT 174
             L   K  +    ++ Q+ E G  P+SI +N++I+ +S SG   E++  F +M   G+ 
Sbjct: 288 DGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVI 347

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW- 233
           PT    N+ I      G+  E+  + D M  +G  KP++ +Y+    +W     +T  W 
Sbjct: 348 PTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGP-KPDIISYSTNA-SWVCYWYVTVVWV 405

Query: 234 ---NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
              N+ + M   G+ P+   +N +  AYA+ G  D+A  +  +M++ G+ P+  T   +I
Sbjct: 406 MWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVI 465

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
           S  C+ G++ +AL     M + GV P+  ++  LI+G     +     E+++ M    + 
Sbjct: 466 SSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIP 525

Query: 351 PDVITY-STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
           P  + Y S+I+N     G + + K+I D M + G +P+   ++ L +GY      E+A  
Sbjct: 526 PPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFA 585

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           LL  M   G  PN  I+ T++ G+C +G +D A+ VF  M   GV P    +  ++ G  
Sbjct: 586 LLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLF 645

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +AR+   A+++   M   G      T+ ++         T EA  +L K+
Sbjct: 646 QARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKL 695



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 106/485 (21%), Positives = 214/485 (44%), Gaps = 40/485 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTT---LLAALTIQKRFNSIH 127
           TV +    +++L + G+  EA+ IF++++  G KP +++Y+T    +    +   +   H
Sbjct: 349 TVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWH 408

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           +I + +   G+ P+   FN +INA++  G M++AM  F  M+  G+ P T T+ T+I   
Sbjct: 409 NIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSL 468

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN---------------------- 225
              G+ ++++   + M   G V P+   Y  L++  CN                      
Sbjct: 469 CRIGRLDDALHKFNHMVDIG-VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPP 527

Query: 226 --------------EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
                         E  + E  ++M  M  +G +P+VVT+N++   Y   G  ++A  ++
Sbjct: 528 GVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALL 587

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
             M   G++PN    G ++ GYCK G+I +AL   R M   GV P  V++++++ G  + 
Sbjct: 588 DAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQA 647

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
                  ++   M E      + TY  ++         D+   + + +    +K D   +
Sbjct: 648 RRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITF 707

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           +I+     +    ++A+EL   +   G  PN+  ++ +I+    + S + A  +F  + +
Sbjct: 708 NIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEK 767

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            G + + +    ++       +  +A   L I+    +  + ST  LLA      G  +E
Sbjct: 768 SGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYRE 827

Query: 512 AKRIL 516
             ++L
Sbjct: 828 HIKLL 832



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 197/457 (43%), Gaps = 41/457 (8%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P++ TY  L+       R +   +I+ ++ +NG+ PD  F  ++I  F + G +++A   
Sbjct: 174 PTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDD-FSYSLIYGFVKDGEVDKAHCL 232

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F +M E G+ P     N++IK      + +++  ++  M   G + P+L TY++++   C
Sbjct: 233 FLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG-IAPDLFTYSLIIDGLC 291

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
             K + +A  V+ +M  +G +P+ +TYN++   Y+ +G  +++  V  +M   GV P   
Sbjct: 292 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 351

Query: 285 TCGIIISGYCKEGKIKEA--------------------------------------LRFA 306
            C   I    K G+  EA                                          
Sbjct: 352 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIF 411

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             M   G+ PN  +FN+LI  +      D    +   M+   + PD +T++T++++    
Sbjct: 412 NLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRI 471

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP-NVVI 425
           G +D     F+ M   G+ P    Y  L +G     E  KA+EL+  M+     P  V  
Sbjct: 472 GRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 531

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           F++II+  C +G +    ++ D M + G  PN+ TF +LM GY        A  +L  M 
Sbjct: 532 FSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMA 591

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           + G+ P    +  L +     G   +A  +   + +K
Sbjct: 592 SIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHK 628



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 92/373 (24%), Positives = 161/373 (43%), Gaps = 44/373 (11%)

Query: 193 PEESVKLLDLMSREG---NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           P  +++L   M R     +  P + TYN+L+  +           ++ ++  +G+ PD  
Sbjct: 153 PALAIELFKRMDRWACPRHSPPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDF 212

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +Y+ I   + ++GE D+A  + +EM   GV P    C  II   CK  ++ +A    + M
Sbjct: 213 SYSLI-YGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKM 271

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF- 368
            + G+ P+L  ++L+I G  +    D  + VL  M E    P+ ITY+++++ +S +G  
Sbjct: 272 VDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMW 331

Query: 369 ------------------MDKC----------------KEIFDDMGKAGIKPDAHAYSIL 394
                             +D C                K IFD M   G KPD  +YS  
Sbjct: 332 NESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTN 391

Query: 395 AK----GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           A      YV          +   M+  G  PN  +F  +I+ +   G MD+A+ +F+ M 
Sbjct: 392 ASWVCYWYVTVVW-VMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQ 450

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
             G+ P+  TF T++       +   A      M   GV P ++ +  L +     G   
Sbjct: 451 NKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELV 510

Query: 511 EAKRILSKIKNKE 523
           +AK ++S++ NK+
Sbjct: 511 KAKELISEMMNKD 523


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/363 (29%), Positives = 184/363 (50%), Gaps = 2/363 (0%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           + +N +I A+   G +EEA +    M + GL P+  TYN +I G    G+   +  +L  
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           M   G + P+  TYN L+   C   N +EA  +  +M   G+ PD+V+++++   +++N 
Sbjct: 62  MLNIG-LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
             DQA     +M+  G+ P+     +++ GYC+ G + EAL+    M E G   +++ +N
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            ++ G  +       D++   M E    PD  T++T+++     G M K   +F  M + 
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
            IKPD  AY+ L  G+ +  E EKA EL   MI     PN + +  +I+ +CS G +  A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-LLLAE 501
             ++D M E G+ P L T  T++ GY  +    +A+E L  M A GV P   ++  L+ +
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIND 360

Query: 502 ARR 504
            +R
Sbjct: 361 GKR 363



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 178/354 (50%), Gaps = 1/354 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +    G  +EA  I N++ + G KPSL TY  ++  L  + R+     I+ ++   G
Sbjct: 7   LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 66

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD+  +N ++       N  EA + F +M   G+ P   ++++L+  +      ++++
Sbjct: 67  LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQAL 126

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M + G V  N+  Y VL+  +C   N+ EA  +  +M   G   DV+ YNTI   
Sbjct: 127 VYFRDMKKFGLVPDNV-IYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNG 185

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +      A+++  EM   G  P+  T   +I G+C++G + +AL    TM +  + P+
Sbjct: 186 LCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPD 245

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N LI GF ++ + +   E+   M   ++ P+ ITY  ++NA+ + G + +   ++D
Sbjct: 246 IVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWD 305

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            M + GIKP     + + KGY R  +  KA+E L  MI  G  P+ + + T+I+
Sbjct: 306 VMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/359 (27%), Positives = 168/359 (46%), Gaps = 1/359 (0%)

Query: 107 LVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW 166
           +VTY TL+ A   +        IM+ + + G+ P    +NA+IN   + G    A     
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
           +M   GL+P T+TYNTL+          E+ ++   M R+G V P+L +++ L+  +   
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQG-VVPDLVSFSSLMAVFSRN 119

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           +++ +A      M   G+ PD V Y  +   Y +NG   +A ++  EM   G   +    
Sbjct: 120 RHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAY 179

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             I++G CKE  + +A +    M E G  P+   F  LI G  +  +      +   M +
Sbjct: 180 NTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQ 239

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             + PD++ Y+T+++ +   G M+K  E++D M    I P+   Y IL   Y       +
Sbjct: 240 RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSE 299

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           A  L   MIE G  P +V   T+I G+C  G   +A E   +M   GV+P+  ++ TL+
Sbjct: 300 AFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 154/301 (51%)

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TYN L+ A+C E  + EA+ +M+ MA  G+KP + TYN I     + G   +A+ +++EM
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
            + G+ P+  T   ++   C+     EA      M   GV P+LV F+ L+  F      
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           D        MK+F + PD + Y+ +M+ +   G M +  +I D+M + G   D  AY+ +
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G  +E+    A++L   M+E G  P+   FTT+I G C DG+M +A+ +F  M +  +
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            P++  + TL+ G+ +  +  +A E+   M +  + P   T+ +L  A  + G   EA R
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 302

Query: 515 I 515
           +
Sbjct: 303 L 303



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 98/348 (28%), Positives = 176/348 (50%), Gaps = 9/348 (2%)

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           TYNTLI  Y   G  EE+ ++++ M+ +G +KP+L TYN ++   C +     A  ++ +
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKG-LKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M   G+ PD  TYNT+     +     +A+E+  EM   GV P+  +   +++ + +   
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLAL---MKEFRVNPDVI 354
           + +AL + R MK++G+ P+ VI+ +L+ G+     R+G + E L +   M E     DVI
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYC----RNGNMLEALKIRDEMLEQGCVLDVI 177

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
            Y+TI+N       +    ++FD+M + G  PD + ++ L  G+ ++    KA  L  TM
Sbjct: 178 AYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTM 237

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
            +    P++V + T+I G+C  G M++A E++D M    + PN  T+  L+  Y      
Sbjct: 238 TQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHV 297

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             A  +  +M   G+ P   T   + +    +G + +A   L ++  K
Sbjct: 298 SEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAK 345



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/208 (30%), Positives = 111/208 (53%), Gaps = 3/208 (1%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T LM+     G   EA  I + ++E G    ++ Y T+L  L  +K       +  ++ E
Sbjct: 145 TVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVE 204

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  PD   F  +I+   + GNM +A+  F  M +  + P    YNTLI G+   G+ E+
Sbjct: 205 RGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEK 264

Query: 196 SVKLLD-LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           + +L D ++SR+  + PN  TY +L+ A+C+  +++EA+ +   M   G+KP +VT NT+
Sbjct: 265 ASELWDGMISRK--IFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTV 322

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPN 282
              Y ++G++ +A+E +  M   GV P+
Sbjct: 323 IKGYCRSGDSSKADEFLGRMIAKGVAPD 350



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 81/163 (49%)

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
           ++TY+T++ A+   G +++  EI + M   G+KP    Y+ +  G  ++    +A+ +L+
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M+  G  P+   + T++   C   +   A E+F +M   GV P+L +F +LM  +S  R
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
              +A    + MK FG+ P    + +L       G   EA +I
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKI 163



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 71/147 (48%), Gaps = 1/147 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++   + G   +A ++F  + +   KP +V Y TL+              +   +
Sbjct: 213 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 272

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
               + P+ I +  +INA+   G++ EA   +  M E G+ PT  T NT+IKGY  +G  
Sbjct: 273 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDS 332

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLV 220
            ++ + L  M  +G V P+  +YN L+
Sbjct: 333 SKADEFLGRMIAKG-VAPDHISYNTLI 358


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 216/426 (50%), Gaps = 1/426 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++RS   L+++L++ G+  +A  ++  +I  G  P + +YT ++ A   + R +   + +
Sbjct: 220 SLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFV 279

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++E +  +P+ + +N++I+ +   G++  A      M E G+   + TY  LIKGY   
Sbjct: 280 KEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKR 339

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ E++ KL+  M  E N+  +   Y VL+ A+C    + +A  +   M   G+K + V 
Sbjct: 340 GQMEQAEKLIGCM-MEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVI 398

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            N++   Y + G  ++A EV+V M+   ++P+      ++ G+CK+    +A +    M 
Sbjct: 399 CNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMH 458

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             GV+  +V +N L+K    +   +    +  LM +  V P+ +TY T+++A+   G  D
Sbjct: 459 NKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFD 518

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   I+ D    G       Y+ +  G+ + ++  +A+E+ + M E GF P+ + + T+I
Sbjct: 519 RAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLI 578

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+C  G++  A+++ D     G+S + + + +L+ G   + +  +   +L  MK   + 
Sbjct: 579 DGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELS 638

Query: 491 PQKSTF 496
           P   T+
Sbjct: 639 PNVVTY 644



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 117/447 (26%), Positives = 215/447 (48%), Gaps = 3/447 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++    E+G  + A  +F+N+ + G  PSL +  +LL+ L           +  Q+   G
Sbjct: 192 ILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALG 251

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +  ++NA+ + G ++EA +   +M+ S   P   TYN+LI GY   G    + 
Sbjct: 252 ILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAK 311

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+L LMS +G +  N RTY +L++ +C    + +A  ++  M    +  D   Y  +  A
Sbjct: 312 KVLALMSEKG-IPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHA 370

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y   G  D A  +   M   G++ N   C  +I+GYCK G + +A     +MK++ + P+
Sbjct: 371 YCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPD 430

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +N L+ GF +  D     ++   M    VN  V+TY+T++      G ++    I++
Sbjct: 431 SYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWN 490

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M K G+ P+   Y  L   + +    ++A  +    +  GF  ++ ++ T+I G+C   
Sbjct: 491 LMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKME 550

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF- 496
            + +A E+F KM E G  P+  T+ TL+ GY +      A ++  + +  G+      + 
Sbjct: 551 KLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYN 610

Query: 497 LLLAEARRATGLTKEAKRILSKIKNKE 523
            L+    R+  L K    +L+++KN+E
Sbjct: 611 SLITGVFRSEELQK-LNGLLAEMKNRE 636



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 206/465 (44%), Gaps = 41/465 (8%)

Query: 60  CSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           C    NK    TV +   L+ +L   G  + A  I+N + + G  P+ VTY TLL A   
Sbjct: 454 CDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFK 513

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
              F+    I       G       +N +I  F +   + +A + F KMKE G  P   T
Sbjct: 514 VGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKMKELGFPPDEIT 573

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           Y TLI GY   G   E++KL D+  R+G +  +   YN L+      + + +   ++ +M
Sbjct: 574 YRTLIDGYCKVGNLVEALKLKDMSERDG-ISSSTEMYNSLITGVFRSEELQKLNGLLAEM 632

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
               + P+VVTY ++   +   G  D+A     +M   G+ PN      I+S   + GKI
Sbjct: 633 KNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKI 692

Query: 300 KEA--------------------------LRFARTMK---EYGVHP------NLVIFNLL 324
            EA                          LR   T K    +G         N +++N+ 
Sbjct: 693 DEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIA 752

Query: 325 IKGFVEIMDRDGVDEVLA--LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           I G  +  + D V  +L+  L+K F   PD  TY ++++A S  G +++   + DDM  A
Sbjct: 753 ITGLCKSKNIDDVRRILSDLLLKGF--CPDNYTYCSLIHACSAVGKVNEAFCLRDDMINA 810

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ P+   Y+ L  G  +    ++A  L   +   G  P VV + T+I G+C  G    A
Sbjct: 811 GLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEA 870

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWG-YSEARQPWRAEEILQIMKA 486
           +E+ DKM E G+ P+  T+ TL+ G Y E +       + ++MKA
Sbjct: 871 LELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKA 915



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 204/456 (44%), Gaps = 38/456 (8%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           F+ ++  F+E G  + A+  F  M + G  P+  + N+L+      G+  +++ + + M 
Sbjct: 189 FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMI 248

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
             G + P++ +Y ++V A+C E  + EA+N + +M  S  +P+VVTYN++   Y   G+ 
Sbjct: 249 ALG-ILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDV 307

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE---------------------------- 296
             A++V+  M   G+  N RT  ++I GYCK                             
Sbjct: 308 CGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVL 367

Query: 297 -------GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
                  G++ +ALR    M + G+  N VI N LI G+ ++   +   EVL  MK++ +
Sbjct: 368 IHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNL 427

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            PD   Y+T+++ +       K  ++ D+M   G+      Y+ L K        E A  
Sbjct: 428 KPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALH 487

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +   M + G  PN V + T++  +   G+ DRA+ ++      G + ++  + T++ G+ 
Sbjct: 488 IWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFC 547

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI--LSKIKNKERTNE 527
           +  +  +A+EI   MK  G  P + T+  L +     G   EA ++  +S+      + E
Sbjct: 548 KMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTE 607

Query: 528 MEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVS 563
           M       V   E L       A   N    PNVV+
Sbjct: 608 MYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVT 643



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 124/556 (22%), Positives = 225/556 (40%), Gaps = 112/556 (20%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+ T L+    +RG+ ++A+ +   ++E         Y  L+ A     R +    I   
Sbjct: 327 RTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDALRIRDA 386

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + + G+  +++  N++IN + + G++ +A +    MK+  L P +  YNTL+ G+     
Sbjct: 387 MLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGFCKQED 446

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA---WNVMHKMAASGMKPDVV 249
             ++ KL D M  +G V   + TYN L++   +  ++  A   WN+MHK    G+ P+ V
Sbjct: 447 FIKAFKLCDEMHNKG-VNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHK---RGVAPNEV 502

Query: 250 TYNTIATAYAQNGEAD-----------------------------------QAEEVIVEM 274
           TY T+  A+ + G  D                                   QA+E+ ++M
Sbjct: 503 TYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLKM 562

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
           +  G  P+  T   +I GYCK G + EAL+     +  G+  +  ++N LI G     + 
Sbjct: 563 KELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEEL 622

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD------- 387
             ++ +LA MK   ++P+V+TY +++  W   G MDK    +  M   GI P+       
Sbjct: 623 QKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKI 682

Query: 388 ---------------------------AHAYSI-LAKGYVREQEPEK------------- 406
                                      AHA+S+ L K  +R  E +K             
Sbjct: 683 VSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIP 742

Query: 407 ----------------------AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
                                    +L  ++  GF P+   + ++I    + G ++ A  
Sbjct: 743 ISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFC 802

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + D M   G+ PN+  +  L+ G  ++    RA  +   +   G+ P   T+  L +   
Sbjct: 803 LRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYC 862

Query: 505 ATGLTKEAKRILSKIK 520
             G T EA  +  K++
Sbjct: 863 KGGRTTEALELKDKMR 878



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/347 (27%), Positives = 163/347 (46%), Gaps = 3/347 (0%)

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
           +E   +PT   ++ ++K +   G  + ++ + D M + G V P+LR+ N L+        
Sbjct: 180 REFSFSPTV--FDMILKVFAEKGMTKFALCVFDNMGKCGRV-PSLRSCNSLLSNLVQNGE 236

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
             +A  V  +M A G+ PD+ +Y  +  AY + G  D+A   + EME +  +PN  T   
Sbjct: 237 AFKALLVYEQMIALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNS 296

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +I GY   G +  A +    M E G+  N   + LLIKG+ +    +  ++++  M E  
Sbjct: 297 LIDGYVSLGDVCGAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKN 356

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           +  D   Y  +++A+ TAG +D    I D M K G+K +    + L  GY +     KA 
Sbjct: 357 LFVDEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAA 416

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           E+L++M +    P+   + T++ G+C      +A ++ D+M   GV+  + T+ TL+   
Sbjct: 417 EVLVSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNL 476

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
                   A  I  +M   GV P + T+  L +A    G    A  I
Sbjct: 477 FHVGHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMI 523



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/367 (22%), Positives = 152/367 (41%), Gaps = 36/367 (9%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +AQ IF  + E G  P  +TY TL+              +    E +G+   +  +N
Sbjct: 551 KLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYN 610

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           ++I     S  +++      +MK   L+P   TY +LI G+   G  +++      M  +
Sbjct: 611 SLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDK 670

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA-------------------------- 240
           G + PN+   + +V +      I EA  ++H++A                          
Sbjct: 671 G-IAPNIIIGSKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQK 729

Query: 241 ---ASGMKP------DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
              + G K       + + YN   T   ++   D    ++ ++   G  P+  T   +I 
Sbjct: 730 IVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIH 789

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
                GK+ EA      M   G+ PN+V++N LI G  +  + D    +   +    ++P
Sbjct: 790 ACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSP 849

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
            V+TY+T+++ +   G   +  E+ D M + GI P +  YS L  G   E + E++  LL
Sbjct: 850 TVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLL 909

Query: 412 MTMIESG 418
             M+++G
Sbjct: 910 NEMMKAG 916



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 75/142 (52%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           K  C    +   L+++    GK  EA  + +++I  G  P++V Y  L+  L      + 
Sbjct: 775 KGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDR 834

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              + +++   G+ P  + +N +I+ + + G   EA++   KM+E G+ P++ TY+TLI 
Sbjct: 835 ARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMREEGICPSSITYSTLIH 894

Query: 186 GYGIAGKPEESVKLLDLMSREG 207
           G  + GK E+SV LL+ M + G
Sbjct: 895 GLYMEGKSEQSVGLLNEMMKAG 916


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 210/433 (48%), Gaps = 1/433 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A + FN L+     PS+V +  LL ++   K ++++ S+ +Q++  G+ P+    N +I
Sbjct: 48  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 107

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N+F     +  A     K+ + G  P  +T+ TLI+G  + GK  E++ L D M  EG  
Sbjct: 108 NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG-F 166

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +PN+ TY  L+   C   N + A  ++  M     +PDVV Y +I  +  ++ +  +A  
Sbjct: 167 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFN 226

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  +M   G+ P+  T   ++   C   + K        M    + P++VIF+ ++    
Sbjct: 227 LFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC 286

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +        E++ +M +  V PDV+TY+T+M+       MD+  ++FD M + G  PD  
Sbjct: 287 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 346

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           +Y+ L  GY +  + +KA  L   M    + P+   + T++ G C  G +  AI +F +M
Sbjct: 347 SYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEM 406

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G  P+L T+  L+    + R    A  +L+ ++A  ++P    + ++ +     G  
Sbjct: 407 VARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGEL 466

Query: 510 KEAKRILSKIKNK 522
           + A+ + S + +K
Sbjct: 467 EAARDLFSNLSSK 479



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/453 (22%), Positives = 211/453 (46%), Gaps = 1/453 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++    KL+ S+ +        ++   +   G  P++ T   L+ +     R     S++
Sbjct: 64  SIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVL 123

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++ + G  PD   F  +I      G + EA+  F KM + G  P   TY TLI G    
Sbjct: 124 AKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKV 183

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    +++LL  M  +GN +P++  Y  ++ + C ++ +TEA+N+  +M   G+ PD+ T
Sbjct: 184 GNTSAAIRLLRSME-QGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y ++  A     E      ++ +M ++ + P+      ++   CKEGK+ EA      M 
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + GV P++V +  L+ G     + D   +V  +M      PDVI+Y+T++N +     +D
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 362

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +F++M +    PD   Y+ L  G       + A  L   M+  G  P++V ++ ++
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILL 422

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C +  ++ A+ +   +    ++P+++ +  ++ G   A +   A ++   + + G+H
Sbjct: 423 DSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLH 482

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           P   T+ ++       GL  EA ++  ++   +
Sbjct: 483 PSVWTYNIMIHGLCKRGLLNEANKLFMEMDGND 515



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 212/430 (49%), Gaps = 8/430 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L   GK  EA  +F+ +I+ G +P++VTY TL+  L      ++   ++  +
Sbjct: 137 TFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 196

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+    PD + + ++I++  +   + EA + F +M   G++P   TY +L+       + 
Sbjct: 197 EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW 256

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +    LL+ M     + P++  ++ +V A C E  +TEA  ++  M   G++PDVVTY T
Sbjct: 257 KHVTTLLNQMV-NSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 315

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +    E D+A +V   M   G  P+  +   +I+GYCK  KI +A+     M    
Sbjct: 316 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKE 375

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMD 370
             P+   +N L+ G   +     + + +AL  E       PD++TYS ++++      ++
Sbjct: 376 WIPDTKTYNTLMYGLCHV---GRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLE 432

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +   +  + + PD   Y+I+  G  R  E E A +L   +   G HP+V  +  +I
Sbjct: 433 EAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMI 492

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C  G ++ A ++F +M  +  SP+  T+ T+  G+ +  +  RA ++L+ M A G  
Sbjct: 493 HGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFS 552

Query: 491 PQKSTFLLLA 500
              S FL+L+
Sbjct: 553 AD-SCFLMLS 561



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/448 (23%), Positives = 205/448 (45%), Gaps = 1/448 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++  L+NS     +   A ++   +++ GH+P   T+TTL+  L ++ +      +  
Sbjct: 100 VYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFD 159

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G  P+ + +  +IN   + GN   A+     M++    P    Y ++I       
Sbjct: 160 KMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDR 219

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  L   M  +G + P++ TY  LV A CN         ++++M  S + PDVV +
Sbjct: 220 QVTEAFNLFSQMVGQG-ISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIF 278

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +T+  A  + G+  +A E++  M   GV+P+  T   ++ G+C + ++ EA++    M  
Sbjct: 279 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 338

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P+++ +  LI G+ +I   D    +   M      PD  TY+T+M      G +  
Sbjct: 339 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQD 398

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F +M   G  PD   YSIL     + +  E+A  LL  +  S  +P++ ++  II 
Sbjct: 399 AIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIID 458

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G ++ A ++F  +   G+ P++ T+  ++ G  +      A ++   M      P
Sbjct: 459 GMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSP 518

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
              T+  +A        T  A ++L ++
Sbjct: 519 DGCTYNTIARGFLQNNETLRAIQLLEEM 546



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 88/183 (48%), Gaps = 3/183 (1%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           KE     ++   LM  L   G+ Q+A A+F+ ++  G  P LVTY+ LL +L   +    
Sbjct: 374 KEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEE 433

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
             +++  +E + ++PD   +N +I+    +G +E A D F  +   GL P+  TYN +I 
Sbjct: 434 AMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIH 493

Query: 186 GYGIAGKPEESVKLLDLMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           G    G   E+ KL   M  +GN   P+  TYN + R +        A  ++ +M A G 
Sbjct: 494 GLCKRGLLNEANKL--FMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGF 551

Query: 245 KPD 247
             D
Sbjct: 552 SAD 554


>gi|242054943|ref|XP_002456617.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
 gi|241928592|gb|EES01737.1| hypothetical protein SORBIDRAFT_03g039460 [Sorghum bicolor]
          Length = 410

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 181/357 (50%), Gaps = 1/357 (0%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           A+++   +SG++ EA   F  M   G+TP   TY  LI GY + G+ E    L+  M R 
Sbjct: 43  ALVHGCCQSGDVAEARRVFDVMPRLGVTPNEVTYTALIHGYFVRGQREMGFALVGEM-RR 101

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G V+PNL TYN LV  WC       A  +  +M   G+  +VV+YN +     ++G+   
Sbjct: 102 GGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKD 161

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A ++   M   G+ P+  T  ++I GY K GK+  AL F   MK  G+ P++V +N LI 
Sbjct: 162 AAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIG 221

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GF    D        + MKE R+ P  +TY+ ++ A++    MD+  E+  +M KAG++ 
Sbjct: 222 GFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEV 281

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D  +Y +L      E +   A +L  +M   G  PN V++  +I G+  +GS  +A+ + 
Sbjct: 282 DVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLI 341

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
            +M + G+ PN+ ++   +       +   AE ++  M+  G+   +S   +L +A+
Sbjct: 342 MEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMEDAGLQTSESICRVLFDAK 398



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 167/340 (49%), Gaps = 1/340 (0%)

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            L+ G   +G   E+ ++ D+M R G V PN  TY  L+  +         + ++ +M  
Sbjct: 43  ALVHGCCQSGDVAEARRVFDVMPRLG-VTPNEVTYTALIHGYFVRGQREMGFALVGEMRR 101

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G++P++ TYN +   + + GE   A  +  EM   GV  N  +  I+I+G C+ GK+K+
Sbjct: 102 GGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKD 161

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A +    M+  G+HP++V FNLLI G+ +             MK   + P V+TY+ ++ 
Sbjct: 162 AAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHFFNQMKAAGLQPSVVTYNELIG 221

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +  A  +      F DM +  + P    Y+IL   + +E E ++A E+L  M ++G   
Sbjct: 222 GFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAKENEMDRAFEMLSEMEKAGLEV 281

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +V  +  ++   C +G M  A ++F  M   GV PN   ++ +++GY      ++A  ++
Sbjct: 282 DVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNVLYDMMIYGYGREGSSYKALRLI 341

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             M+  G+ P  +++ L        G  +EA+ ++  +++
Sbjct: 342 MEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDMED 381



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 158/314 (50%), Gaps = 9/314 (2%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++    RG+ +   A+   +  GG +P+L TY  L+        F S   +  ++  
Sbjct: 77  TALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEMPL 136

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+  + + +N +I      G +++A   F  M+  G+ P+  T+N LI GYG AGK   
Sbjct: 137 KGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSN 196

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++   + M   G ++P++ TYN L+  +C  ++I  A      M    + P  VTY  + 
Sbjct: 197 ALHFFNQMKAAG-LQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILI 255

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            A+A+  E D+A E++ EME  G++ + ++ G+++   C EGK+  A +  ++M   GV 
Sbjct: 256 GAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVK 315

Query: 316 PNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDK 371
           PN V+++++I G+     R+G   + L L+ E R   + P+V +Y   +      G   +
Sbjct: 316 PNNVLYDMMIYGY----GREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQE 371

Query: 372 CKEIFDDMGKAGIK 385
            + +  DM  AG++
Sbjct: 372 AEALIGDMEDAGLQ 385



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/331 (22%), Positives = 151/331 (45%)

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           A +   ++ +L   ++ G+   ++     LV   C   ++ EA  V   M   G+ P+ V
Sbjct: 15  AAEVRSALAVLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLGVTPNEV 74

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +   Y   G+ +    ++ EM   GV+PN  T   ++  +C+ G+ K A      M
Sbjct: 75  TYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSARLLFDEM 134

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              GV  N+V +N+LI G           ++   M+   ++P ++T++ +++ +  AG M
Sbjct: 135 PLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKM 194

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
                 F+ M  AG++P    Y+ L  G+ R ++   A      M E    P  V +T +
Sbjct: 195 SNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTIL 254

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I  +  +  MDRA E+  +M + G+  +++++  L+       +   A ++ Q M + GV
Sbjct: 255 IGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGV 314

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            P    + ++       G + +A R++ +++
Sbjct: 315 KPNNVLYDMMIYGYGREGSSYKALRLIMEMR 345



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/256 (26%), Positives = 127/256 (49%), Gaps = 1/256 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R V S   L+  L   GK ++A  +F  +   G  PS+VT+  L+       + ++    
Sbjct: 141 RNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGYGKAGKMSNALHF 200

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
            +Q++  G+ P  + +N +I  F  + ++  A+  F  MKE  L PT  TY  LI  +  
Sbjct: 201 FNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTKVTYTILIGAFAK 260

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
             + + + ++L  M + G ++ ++++Y VL+ A C E  +  A  +   M + G+KP+ V
Sbjct: 261 ENEMDRAFEMLSEMEKAG-LEVDVQSYGVLLHALCMEGKMMHARKLFQSMDSKGVKPNNV 319

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y+ +   Y + G + +A  +I+EM  +G+ PN  +  + I   C EGK +EA      M
Sbjct: 320 LYDMMIYGYGREGSSYKALRLIMEMRKSGLIPNVASYCLTIRLLCNEGKCQEAEALIGDM 379

Query: 310 KEYGVHPNLVIFNLLI 325
           ++ G+  +  I  +L 
Sbjct: 380 EDAGLQTSESICRVLF 395



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 129/304 (42%), Gaps = 1/304 (0%)

Query: 220 VRAWCNEKNITEAWNVMHKMAASG-MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           VR  C    +  A  V+ +   SG    DV     +     Q+G+  +A  V   M   G
Sbjct: 9   VRRLCAAAEVRSALAVLARGTKSGDAALDVAACTALVHGCCQSGDVAEARRVFDVMPRLG 68

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           V PN  T   +I GY   G+ +        M+  GV PNL  +N L+  +    +     
Sbjct: 69  VTPNEVTYTALIHGYFVRGQREMGFALVGEMRRGGVEPNLYTYNCLVGEWCRTGEFKSAR 128

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            +   M    V  +V++Y+ ++      G +    ++F+ M + GI P    +++L  GY
Sbjct: 129 LLFDEMPLKGVVRNVVSYNILIAGLCRHGKLKDAAQLFEAMRREGIHPSMVTFNLLIDGY 188

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +  +   A      M  +G  P+VV +  +I G+C    +  AI  F  M E  ++P  
Sbjct: 189 GKAGKMSNALHFFNQMKAAGLQPSVVTYNELIGGFCRARDIAHAIRAFSDMKERRLAPTK 248

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+  L+  +++  +  RA E+L  M+  G+     ++ +L  A    G    A+++   
Sbjct: 249 VTYTILIGAFAKENEMDRAFEMLSEMEKAGLEVDVQSYGVLLHALCMEGKMMHARKLFQS 308

Query: 519 IKNK 522
           + +K
Sbjct: 309 MDSK 312


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 222/445 (49%), Gaps = 4/445 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T  +  L   GK  EA  I   + + G  P +VTYT L+ AL    + N+   +  
Sbjct: 262 IYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFL 321

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIA 190
           +++ +   PD + +  +++ FS+ G+++ A+  FW +M+  G  P   T+  LI      
Sbjct: 322 KMKASSHKPDRVTYITLLDKFSDHGDLD-AIKEFWSEMEADGYLPDVVTFTILIDALCKV 380

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK +E+   LD+M ++G V PNL TYN L+        + EA  + + M + G++    T
Sbjct: 381 GKVDEAFGTLDVMKKQG-VAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYT 439

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y      Y ++GE+ +A +   +M+ NG+ PN   C   +    ++G+++EA  F   +K
Sbjct: 440 YILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLK 499

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G+ P+ + +N+L++ + +    D   ++L+ M+E   +P+V+  +++++    A  +D
Sbjct: 500 KCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVD 559

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  ++F  M +  + P    Y+ L  G  +E   ++A  L   MI     PN + F T++
Sbjct: 560 EAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLL 619

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C +G +D A+++  +M E    P++ T+ T+++G  +  +   A  +   MK   ++
Sbjct: 620 DCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IY 678

Query: 491 PQKSTFLLLAEARRATGLTKEAKRI 515
           P   T   L       G  ++A R+
Sbjct: 679 PDYVTLCTLLPGVIKDGRIEDAFRV 703



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 215/461 (46%), Gaps = 7/461 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L++ L++ G  +EA  ++  ++  G KPSL TY+ L+ AL  ++   ++  ++ ++
Sbjct: 194 SYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALMVALGKRRDIETVMGLLQEM 253

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E  G+ P+   F   I     +G ++EA     +M ++G  P   TY  LI     AGK 
Sbjct: 254 ESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKL 313

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             + +L  L  +  + KP+  TY  L+  + +  ++        +M A G  PDVVT+  
Sbjct: 314 NNAKELF-LKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTI 372

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A  + G+ D+A   +  M+  GV PN  T   +I G  +  ++ EAL    +M+  G
Sbjct: 373 LIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSMESLG 432

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           +      + L I  + +  +     +    MK   + P+++  +  + + +  G +++ K
Sbjct: 433 LETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAK 492

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E F+ + K G+ PDA  Y+IL + Y +    + A +LL  M E+G  P VVI  ++I   
Sbjct: 493 EFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTL 552

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
                +D A ++F +M E  ++P + T+ TL+ G  +  +   A  + + M A    P  
Sbjct: 553 YKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNT 612

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI 534
            +F  L +     G    A ++L       R  EM    D+
Sbjct: 613 ISFNTLLDCLCKNGEVDLALKMLF------RMTEMNCFPDV 647



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 202/427 (47%), Gaps = 7/427 (1%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNNLIE--GGHKPSLVTYTTLLAALTIQKRF-NSIHSIM 130
            ++  L+  +I+ G+ ++A  +    +   G H      +  L+  + I+     SI    
Sbjct: 683  TLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADG-SFWEDLMGGILIEAEIGQSILFAE 741

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES-GLTPTTSTYNTLIKGYGI 189
            S V     + DS+    ++    + G   +A + F K+ +S  +TP+   YN+LI G   
Sbjct: 742  SLVCNTICEDDSVLI-PLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLK 800

Query: 190  AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            A   E +  L   M   G   P++ TYN+ + A      I E +++  +M   G KP+ +
Sbjct: 801  ARLTEMAWGLFYKMKNAG-CTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTI 859

Query: 250  TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            T+N +     ++   D+A ++  ++      P   T G +I G  K G+++EA +F   M
Sbjct: 860  THNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEM 919

Query: 310  KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
             +YG  PN  ++N+L+ GF +  D +   E+   M +  + PD+ +YS +++     G +
Sbjct: 920  LDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKV 979

Query: 370  DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            D     F+++  +G+ PD   Y+++  G  R Q  E+A  L   M   G  P++  +  +
Sbjct: 980  DDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNAL 1039

Query: 430  ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            I      G ++ A ++++++   G+ PN+ T+  L+ G+S +  P RA  + + M   G 
Sbjct: 1040 ILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGC 1099

Query: 490  HPQKSTF 496
             P   TF
Sbjct: 1100 RPNTGTF 1106



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 103/437 (23%), Positives = 199/437 (45%), Gaps = 8/437 (1%)

Query: 88  PQEAQAIFNNLIEGGHKPSLV----TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
           P +A + FN++ E    P ++    T   +L  L   +R   +  + + +++  +     
Sbjct: 102 PNQAFSFFNSVAE---MPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSIN 158

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            +  +       G + EA     KM++ G      +Y  LI     +G   E++K+   M
Sbjct: 159 TYLTIFKVLYIRGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRM 218

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
             EG +KP+L+TY+ L+ A    ++I     ++ +M + G++P++ T+        + G+
Sbjct: 219 VSEG-IKPSLKTYSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGK 277

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D+A  ++  M+  G  P+  T  ++I   C  GK+  A      MK     P+ V +  
Sbjct: 278 IDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYIT 337

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           L+  F +  D D + E  + M+     PDV+T++ +++A    G +D+     D M K G
Sbjct: 338 LLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQG 397

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           + P+ H Y+ L  G +R    ++A EL  +M   G       +   I  +   G   +AI
Sbjct: 398 VAPNLHTYNTLICGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAI 457

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           + F+KM  +G+ PN+      ++  +E  +   A+E    +K  G+ P   T+ +L    
Sbjct: 458 KTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCY 517

Query: 504 RATGLTKEAKRILSKIK 520
              G   +A ++LS+++
Sbjct: 518 GKAGRVDDAIKLLSEME 534



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 104/482 (21%), Positives = 203/482 (42%), Gaps = 37/482 (7%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
            S   L++ L + G+   A  +   + E    P ++TY T++  L  + R N    +  Q+
Sbjct: 614  SFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQM 673

Query: 134  EENGMDPDSIFFNAVINAFSESGNMEEAM---------------DTFWK----------- 167
            ++  + PD +    ++    + G +E+A                 +FW+           
Sbjct: 674  KKV-IYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAE 732

Query: 168  MKESGLTPTTSTYNT----------LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
            + +S L   +   NT          L+K     GK  ++  +   +++   + P+L  YN
Sbjct: 733  IGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYN 792

Query: 218  VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
             L+      +    AW + +KM  +G  PDV TYN    A  ++G+  +  ++  EM   
Sbjct: 793  SLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFR 852

Query: 278  GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
            G +PN  T  I+I G  K   + +A+     +      P    +  LI G +++   +  
Sbjct: 853  GCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEA 912

Query: 338  DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
             +    M ++   P+   Y+ +MN +   G ++   E+F  M K GI+PD  +YSI+   
Sbjct: 913  KQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDC 972

Query: 398  YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
                 + + A      +  SG  P++V +  +I+G      ++ A+ +FD+M   G++P+
Sbjct: 973  LCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPD 1032

Query: 458  LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
            L T+  L+     A     A ++ + ++  G+ P   T+  L      +G    A  +  
Sbjct: 1033 LYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYK 1092

Query: 518  KI 519
            K+
Sbjct: 1093 KM 1094



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/488 (21%), Positives = 210/488 (43%), Gaps = 37/488 (7%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            TV +   L+  L + G+ QEA A+F  +I     P+ +++ TLL  L      +    ++
Sbjct: 576  TVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKML 635

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++ E    PD + +N VI    +   +  A   F +MK+  + P   T  TL+ G    
Sbjct: 636  FRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKV-IYPDYVTLCTLLPGVIKD 694

Query: 191  GKPEESVKLL-----------------DLMSR---EGNVKPNL---------------RT 215
            G+ E++ ++                  DLM     E  +  ++                 
Sbjct: 695  GRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSV 754

Query: 216  YNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
               LV+  C      +A+NV  K+  S  + P +  YN++     +    + A  +  +M
Sbjct: 755  LIPLVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKM 814

Query: 275  EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
            ++ G  P+  T  + +    K GKIKE       M   G  PN +  N++I G V+    
Sbjct: 815  KNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSL 874

Query: 335  DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
            D   ++   +     +P   TY  +++     G +++ K+ F++M   G  P+   Y+IL
Sbjct: 875  DKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNIL 934

Query: 395  AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
              G+ ++ + E A EL   M++ G  P++  ++ ++   C  G +D A+  F+++   G+
Sbjct: 935  MNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGL 994

Query: 455  SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
             P+L  +  ++ G   +++   A  +   M+  G+ P   T+  L       G+ +EA +
Sbjct: 995  DPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGK 1054

Query: 515  ILSKIKNK 522
            +  +++ K
Sbjct: 1055 MYEELQLK 1062



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 162/342 (47%), Gaps = 21/342 (6%)

Query: 61   SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
            SFC+      ++ +   L++ L++    + A  +F  +   G  P + TY   L AL   
Sbjct: 781  SFCITP----SLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKS 836

Query: 121  KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
             +   +  +  ++   G  P++I  N VI    +S ++++A+D ++ +     +PT  TY
Sbjct: 837  GKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTY 896

Query: 181  NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
              LI G    G+ EE+ +  + M   G + PN   YN+L+  +  + ++  A  +  +M 
Sbjct: 897  GPLIDGLLKLGRLEEAKQFFEEMLDYGCM-PNCPLYNILMNGFGKQGDVETACELFRRMV 955

Query: 241  ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
              G++PD+ +Y+ +       G+ D A     E++ +G+ P+     ++I+G  +  +++
Sbjct: 956  KEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVE 1015

Query: 301  EALRFARTMKEYGVHPNL-----VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PD 352
            EAL     M+  G+ P+L     +I NL I G VE        E   + +E ++    P+
Sbjct: 1016 EALSLFDEMRNRGITPDLYTYNALILNLGIAGMVE--------EAGKMYEELQLKGLEPN 1067

Query: 353  VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
            V TY+ ++   S +G  D+   ++  M   G +P+   ++ L
Sbjct: 1068 VFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 131/304 (43%), Gaps = 38/304 (12%)

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           ++RA    +++   +N+M K     +K  + TY TI       G   +A   + +M   G
Sbjct: 131 MLRAHRRVEDMVVVFNLMQKQI---IKRSINTYLTIFKVLYIRGGLREAPVALEKMRKVG 187

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
              NG +   +I    K G  +EAL+  R M   G+ P+L  ++ L+   V +  R  ++
Sbjct: 188 FVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSALM---VALGKRRDIE 244

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            V+ L++                                +M   G++P+ + ++I  +  
Sbjct: 245 TVMGLLQ--------------------------------EMESLGLRPNIYTFTICIRIL 272

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            R  + ++A  +L  M ++G  P+VV +T +I   C+ G ++ A E+F KM      P+ 
Sbjct: 273 GRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDR 332

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+ TL+  +S+       +E    M+A G  P   TF +L +A    G   EA   L  
Sbjct: 333 VTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDV 392

Query: 519 IKNK 522
           +K +
Sbjct: 393 MKKQ 396


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 225/476 (47%), Gaps = 44/476 (9%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+  EA      ++E G +P+L+TY+ L+  LT  KR    + ++ ++ + G  P+ I +
Sbjct: 309 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 368

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMS 204
           N +I++F E+G++ +A++    M   GL+ T+STYNTLIKGY   G+ + + +LL +++S
Sbjct: 369 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 428

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
              NV  N  ++  ++   C+      A   + +M    M P      T+ +   ++G+ 
Sbjct: 429 IGFNV--NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 486

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A E+  +  + G   + RT   ++ G C+ GK+ EA R  + +   G   + V +N L
Sbjct: 487 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 546

Query: 325 IKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           I G      +  +DE    + E     + PD  TYS ++        +++  + +DD  +
Sbjct: 547 ISG---CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G+ PD + YS++  G  + +  E+ +E    M+     PN V++  +I  +C  G +  
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMW----------------------------------- 466
           A+E+ + M   G+SPN  T+ +L+                                    
Sbjct: 664 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 723

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           GY +  Q  + E +L+ M +  VHP K T+ ++       G   EA R+L++++ K
Sbjct: 724 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 779



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 191/398 (47%), Gaps = 1/398 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  +   L+    + G+   A+ +   ++  G   +  ++T+++  L     F+S    +
Sbjct: 399 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 458

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++    M P       +I+   + G   +A++ +++    G    T T N L+ G   A
Sbjct: 459 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 518

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK +E+ ++   +   G V   + +YN L+   C +K + EA+  + +M   G+KPD  T
Sbjct: 519 GKLDEAFRIQKEILGRGCVMDRV-SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 577

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +        + ++A +   + + NG+ P+  T  ++I G CK  + +E   F   M 
Sbjct: 578 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 637

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              V PN V++N LI+ +          E+   MK   ++P+  TY++++   S    ++
Sbjct: 638 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 697

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + K +F++M   G++P+   Y+ L  GY +  +  K E LL  M     HPN + +T +I
Sbjct: 698 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 757

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            G+  DG++  A  + ++M E G+ P+  T++  ++GY
Sbjct: 758 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 795



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 208/476 (43%), Gaps = 3/476 (0%)

Query: 48  NSKPTDSQPQTHCSFCMNKESCRTVRSM-TKLMNSLIERGKPQEAQAIFNNLIEGGHKPS 106
           +S+   +      S C ++E  R +  +  ++  +  +R     A  +F  L   G  PS
Sbjct: 166 DSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPS 225

Query: 107 LVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW 166
             T   LL +L     F         V + G+ PD   F   INAF + G +EEA+  F 
Sbjct: 226 KTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFS 284

Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
           KM+E+G+ P   T+NT+I G G+ G+ +E+    + M   G ++P L TY++LV+     
Sbjct: 285 KMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG-MEPTLITYSILVKGLTRA 343

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           K I +A+ V+ +M   G  P+V+ YN +  ++ + G  ++A E+   M   G+     T 
Sbjct: 344 KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY 403

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             +I GYCK G+   A R  + M   G + N   F  +I      +  D     +  M  
Sbjct: 404 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 463

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             ++P     +T+++     G   K  E++      G   D    + L  G     + ++
Sbjct: 464 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 523

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  +   ++  G   + V + T+ISG C    +D A    D+M + G+ P+  T+  L+ 
Sbjct: 524 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 583

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G     +   A +     K  G+ P   T+ ++ +       T+E +    ++ +K
Sbjct: 584 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 639



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 190/419 (45%), Gaps = 1/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++S IE G   +A  I + ++  G   +  TY TL+       + ++   ++ ++   G
Sbjct: 371 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 430

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            + +   F +VI         + A+    +M    ++P      TLI G    GK  +++
Sbjct: 431 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 490

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L      +G V  + RT N L+   C    + EA+ +  ++   G   D V+YNT+ + 
Sbjct: 491 ELWFQFLNKGFV-VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 549

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                + D+A   + EM   G++P+  T  I+I G     K++EA++F    K  G+ P+
Sbjct: 550 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 609

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  ++++I G  +    +   E    M    V P+ + Y+ ++ A+  +G +    E+ +
Sbjct: 610 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 669

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM   GI P++  Y+ L KG       E+A+ L   M   G  PNV  +T +I G+   G
Sbjct: 670 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 729

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            M +   +  +M    V PN  T+  ++ GY+       A  +L  M+  G+ P   T+
Sbjct: 730 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 788



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 7/337 (2%)

Query: 111 TTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE 170
           TTL++ L    + +    +  Q    G   D+   NA+++   E+G ++EA     ++  
Sbjct: 474 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 533

Query: 171 SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
            G      +YNTLI G     K +E+   LD M + G +KP+  TY++L+    N   + 
Sbjct: 534 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG-LKPDNYTYSILICGLFNMNKVE 592

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
           EA         +GM PDV TY+ +     +    ++ +E   EM    VQPN      +I
Sbjct: 593 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 652

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR-- 348
             YC+ G++  AL     MK  G+ PN   +  LIKG + I+ R  V+E   L +E R  
Sbjct: 653 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG-MSIISR--VEEAKLLFEEMRME 709

Query: 349 -VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            + P+V  Y+ +++ +   G M K + +  +M    + P+   Y+++  GY R+    +A
Sbjct: 710 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 769

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
             LL  M E G  P+ + +   I G+   G +  A +
Sbjct: 770 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 1/181 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           + +E Q  F+ ++    +P+ V Y  L+ A     R +    +   ++  G+ P+S  + 
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           ++I   S    +EEA   F +M+  GL P    Y  LI GYG  G+  +   LL  M  +
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            NV PN  TY V++  +  + N+TEA  ++++M   G+ PD +TY      Y + G   +
Sbjct: 745 -NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 803

Query: 267 A 267
           A
Sbjct: 804 A 804



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 3/128 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  S+ K M S+I R   +EA+ +F  +   G +P++  YT L+       +   +  ++
Sbjct: 682 TYTSLIKGM-SIISR--VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 738

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++    + P+ I +  +I  ++  GN+ EA     +M+E G+ P + TY   I GY   
Sbjct: 739 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 798

Query: 191 GKPEESVK 198
           G   E+ K
Sbjct: 799 GGVLEAFK 806


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 214/434 (49%), Gaps = 7/434 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+N L    +  E  A    ++  G+ P +VT+TTL+  L ++ R      +  ++
Sbjct: 128 TLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRM 187

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES------GLTPTTSTYNTLIKGY 187
           ++ G  P+ + +  +I      GN+  A+    +M            P   +Y+ +I G 
Sbjct: 188 QKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGL 247

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G  EE++ L + M  +G V+PN+ T++VL+   C E  + +A  ++  M   G+ P+
Sbjct: 248 CKVGNWEEAICLFNEMVDQG-VQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPN 306

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           + TY ++   +   G+ + A+E+ V M   G +P+  +  ++I+GYCK  K++EA++   
Sbjct: 307 LFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFN 366

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M   G+ P++    +L+K        D   E+  ++K + +  D+      ++     G
Sbjct: 367 EMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNG 426

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
           ++ +  ++F+++    +K D   +  L  G  +  + E A EL   + E G  P+ + ++
Sbjct: 427 YIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYS 486

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           ++I G+C  G +D+A  +F KM E+G SP+L T+  LM G+ E+ +  +  ++L  M   
Sbjct: 487 SMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEK 546

Query: 488 GVHPQKSTFLLLAE 501
            V P    + ++ +
Sbjct: 547 DVWPDDGIYAIVED 560



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 196/421 (46%), Gaps = 7/421 (1%)

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
           S+ ++  LLA L   + ++ + S+  Q+   G+ PD +  N +IN       + E +   
Sbjct: 90  SIFSFNRLLAGLAKIEHYSQVFSLYKQMHLAGLWPDLLTLNILINCLCNVNRINEGLAAM 149

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
             +   G  P   T+ TLIKG  +  +  E+ KL   M + G   PN+ TY  L++  C 
Sbjct: 150 AGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLG-CTPNVVTYGTLIKGLCA 208

Query: 226 EKNITEAWNVMHKMA------ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
             NI  A     +M           +P+V++Y+ I     + G  ++A  +  EM   GV
Sbjct: 209 LGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGV 268

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           QPN  T  ++I   CKEG++ +A +    M + G+ PNL  +  LIKGF  + D +   E
Sbjct: 269 QPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKE 328

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +   M      PDVI+Y+ ++N +     +++  ++F++M   G+ PD     +L K   
Sbjct: 329 LFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALF 388

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
              + + A+EL   +       ++ I    + G C +G +  A+++F+++  + +  +++
Sbjct: 389 LAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIE 448

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           TF  L+ G  +A +   A E+ + +   G+ P    +  +       G   +A  +  K+
Sbjct: 449 TFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKM 508

Query: 520 K 520
           +
Sbjct: 509 E 509



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 164/333 (49%), Gaps = 1/333 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           +P++++Y+ ++  L     +     + +++ + G+ P+ + F+ +I+   + G + +A  
Sbjct: 234 RPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKK 293

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
               M + G+ P   TY +LIKG+ + G    + +L   M  +G  +P++ +YN+L+  +
Sbjct: 294 LLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKG-YEPDVISYNMLINGY 352

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C    + EA  + ++M   GM PDV T   +  A    G+ D A+E+   ++   +  + 
Sbjct: 353 CKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDL 412

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
             C I + G CK G I EA++    ++ Y +  ++  F  LI G  +    +   E+   
Sbjct: 413 CICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEK 472

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           + E  + PD + YS++++ +   G +DK   +F  M + G  PD   YSIL +G+    +
Sbjct: 473 LYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNK 532

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            EK  +LL  MIE    P+  I+  +    C D
Sbjct: 533 LEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKD 565



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 85/357 (23%), Positives = 173/357 (48%), Gaps = 7/357 (1%)

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           ++N L+ G        +   L   M   G + P+L T N+L+   CN   I E    M  
Sbjct: 93  SFNRLLAGLAKIEHYSQVFSLYKQMHLAG-LWPDLLTLNILINCLCNVNRINEGLAAMAG 151

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           +   G  PDVVT+ T+           +A ++ + M+  G  PN  T G +I G C  G 
Sbjct: 152 IMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGN 211

Query: 299 IKEALRFARTMKE------YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
           I  AL++ + M        +   PN++ ++++I G  ++ + +    +   M +  V P+
Sbjct: 212 INIALKWHQEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPN 271

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
           V+T+S +++     G + K K++ + M + GI P+   Y+ L KG+    +   A+EL +
Sbjct: 272 VVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFV 331

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
           +M   G+ P+V+ +  +I+G+C    ++ A+++F++M   G+ P++KT   L+     A 
Sbjct: 332 SMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAG 391

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEME 529
           +   A+E+ +++K + +        +  +     G   EA ++ +++++     ++E
Sbjct: 392 KVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIE 448



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/345 (24%), Positives = 173/345 (50%), Gaps = 2/345 (0%)

Query: 68  SCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           +CR  V S + +++ L + G  +EA  +FN +++ G +P++VT++ L+  L  + +    
Sbjct: 232 NCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKA 291

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
             ++  + + G+ P+   + ++I  F   G++  A + F  M   G  P   +YN LI G
Sbjct: 292 KKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLING 351

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
           Y    K EE++KL + M   G + P+++T  VL++A      + +A  +   +    M  
Sbjct: 352 YCKTLKVEEAMKLFNEMLHVG-MWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPK 410

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           D+           +NG   +A ++  E+E   ++ +  T G +I G CK GK++ A    
Sbjct: 411 DLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELF 470

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             + E G+ P+ + ++ +I GF +    D  + +   M+E   +PD+ITYS +M  +  +
Sbjct: 471 EKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYES 530

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
             ++K  ++   M +  + PD   Y+I+     ++++ ++  +LL
Sbjct: 531 NKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLL 575


>gi|356519743|ref|XP_003528529.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g11690-like [Glycine max]
          Length = 556

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 200/419 (47%), Gaps = 2/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N+ +      +A    +++I  GH P   T+  LL  L     F+    I ++++   
Sbjct: 95  VVNAYVHSHSTDQALTFLHHMIHEGHVPLSNTFNNLLCLLIRSNYFDKAWWIFNELKSK- 153

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D+  F  +I    E+G   +       ++E GL+P    Y TLI G    G    + 
Sbjct: 154 VVLDAYSFGIMIKGCCEAGYFVKGFRLLAMLEEFGLSPNVVIYTTLIDGCCKDGNVMLAK 213

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M+R G V PN  TY+VL+  +  +    E + +   M  SG+ P+   YN + + 
Sbjct: 214 NLFCKMNRLGLV-PNPHTYSVLMNGFFKQGLQREGFQMYENMKRSGIVPNAYAYNCLISE 272

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y  +G  D+A +V  EM   G+     T  I+I G C+  K  EA++    + + G+ PN
Sbjct: 273 YCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPN 332

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N+LI GF ++   D    +   +K   ++P ++TY+T++  +S    +    ++  
Sbjct: 333 IVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVK 392

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M +  I P    Y+IL   + R    EKA E+   M +SG  P+V  ++ ++ G C  G
Sbjct: 393 EMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLVPDVYTYSVLLHGLCVHG 452

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           +M  A ++F  + E  + PN   + T++ GY +    +RA  +L  M   G+ P  ++F
Sbjct: 453 NMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASF 511



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 179/363 (49%), Gaps = 1/363 (0%)

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNME 159
           E G  P++V YTTL+             ++  ++   G+ P+   ++ ++N F + G   
Sbjct: 186 EFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQR 245

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           E    +  MK SG+ P    YN LI  Y   G  +++ K+   M RE  +   + TYN+L
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEM-REKGIACGVMTYNIL 304

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +   C  K   EA  ++HK+   G+ P++VTYN +   +    + D A  +  +++ +G+
Sbjct: 305 IGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGL 364

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            P   T   +I+GY K   +  AL   + M+E  + P+ V + +LI  F  +   +   E
Sbjct: 365 SPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACE 424

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           + +LM++  + PDV TYS +++     G M +  ++F  +G+  ++P++  Y+ +  GY 
Sbjct: 425 MHSLMEKSGLVPDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYC 484

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +E    +A  LL  M++SG  PNV  F + I   C D     A  +  +M   G+ P++ 
Sbjct: 485 KEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVS 544

Query: 460 TFE 462
            ++
Sbjct: 545 LYK 547



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 83/354 (23%), Positives = 182/354 (51%), Gaps = 1/354 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++   + G    A+ +F  +   G  P+  TY+ L+     Q        +   ++ 
Sbjct: 197 TTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQREGFQMYENMKR 256

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +G+ P++  +N +I+ +   G +++A   F +M+E G+     TYN LI G     K  E
Sbjct: 257 SGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREKGIACGVMTYNILIGGLCRGKKFGE 316

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +VKL+  +++ G + PN+ TYN+L+  +C+ + +  A  + +++ +SG+ P +VTYNT+ 
Sbjct: 317 AVKLVHKVNKVG-LSPNIVTYNILINGFCDVRKMDSAVRLFNQLKSSGLSPTLVTYNTLI 375

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             Y++      A +++ EME   + P+  T  I+I  + +    ++A      M++ G+ 
Sbjct: 376 AGYSKVENLAGALDLVKEMEERCIAPSKVTYTILIDAFARLNHTEKACEMHSLMEKSGLV 435

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++  +++L+ G     +     ++   + E  + P+ + Y+T+++ +   G   +   +
Sbjct: 436 PDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRL 495

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            ++M ++G+ P+  ++        R+++ ++AE LL  MI SG  P+V ++  +
Sbjct: 496 LNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMV 549



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 143/321 (44%), Gaps = 50/321 (15%)

Query: 41  EKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIE 100
           E  Q+Y N K +   P  +   C+  E C                G   +A  +F  + E
Sbjct: 246 EGFQMYENMKRSGIVPNAYAYNCLISEYCND--------------GMVDKAFKVFAEMRE 291

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
            G    ++TY  L+  L   K+F     ++ +V + G+ P+ + +N +IN F +   M+ 
Sbjct: 292 KGIACGVMTYNILIGGLCRGKKFGEAVKLVHKVNKVGLSPNIVTYNILINGFCDVRKMDS 351

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYG----IAG------------------------- 191
           A+  F ++K SGL+PT  TYNTLI GY     +AG                         
Sbjct: 352 AVRLFNQLKSSGLSPTLVTYNTLIAGYSKVENLAGALDLVKEMEERCIAPSKVTYTILID 411

Query: 192 ------KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
                   E++ ++  LM + G V P++ TY+VL+   C   N+ EA  +   +    ++
Sbjct: 412 AFARLNHTEKACEMHSLMEKSGLV-PDVYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQ 470

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P+ V YNT+   Y + G + +A  ++ EM  +G+ PN  +    I   C++ K KEA   
Sbjct: 471 PNSVIYNTMIHGYCKEGSSYRALRLLNEMVQSGMVPNVASFCSTIGLLCRDEKWKEAELL 530

Query: 306 ARTMKEYGVHPNLVIFNLLIK 326
              M   G+ P++ ++ ++ K
Sbjct: 531 LGQMINSGLKPSVSLYKMVHK 551



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 47/168 (27%), Positives = 85/168 (50%), Gaps = 1/168 (0%)

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           T++ ++     + + DK   IF+++ K+ +  DA+++ I+ KG        K   LL  +
Sbjct: 126 TFNNLLCLLIRSNYFDKAWWIFNEL-KSKVVLDAYSFGIMIKGCCEAGYFVKGFRLLAML 184

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
            E G  PNVVI+TT+I G C DG++  A  +F KM   G+ PN  T+  LM G+ +    
Sbjct: 185 EEFGLSPNVVIYTTLIDGCCKDGNVMLAKNLFCKMNRLGLVPNPHTYSVLMNGFFKQGLQ 244

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
               ++ + MK  G+ P    +  L       G+  +A ++ ++++ K
Sbjct: 245 REGFQMYENMKRSGIVPNAYAYNCLISEYCNDGMVDKAFKVFAEMREK 292



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 29/117 (24%), Positives = 54/117 (46%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L   G  +EA  +F +L E   +P+ V Y T++     +        +++
Sbjct: 438 VYTYSVLLHGLCVHGNMKEASKLFKSLGEMHLQPNSVIYNTMIHGYCKEGSSYRALRLLN 497

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++ ++GM P+   F + I         +EA     +M  SGL P+ S Y  + K  G
Sbjct: 498 EMVQSGMVPNVASFCSTIGLLCRDEKWKEAELLLGQMINSGLKPSVSLYKMVHKVKG 554


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 202/433 (46%), Gaps = 1/433 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L+  L + G+       +N+++  G  P+  TY  LL +L   +RF    S+   +
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P+   ++ +I        ++EA +   +M + G  P   TY +L+ G    GK 
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+V L   M   G   P+   YNVL+  +  + ++ EA+ +  +M   G  P V TYN+
Sbjct: 139 KEAVDLFSRMVYRG-CPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           + + +++ GE  + + +  +M   G  PN  T   ++ G+CK G + EA R    M+  G
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLG 257

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P++V +N L++G            +L  M    V PD+++Y+ +++ +S +G +D   
Sbjct: 258 CPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAI 317

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           ++F ++ K+G++PDA +YS +     R  +   A  +   MI +G  P+  +   ++ G 
Sbjct: 318 KLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGL 377

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C    +  + E+F  M +    P +  +  LM+   +A++     EI   +   G  P  
Sbjct: 378 CRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDV 437

Query: 494 STFLLLAEARRAT 506
               ++ E  R +
Sbjct: 438 EISKVILETLRRS 450



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 191/403 (47%), Gaps = 37/403 (9%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  + C   V S + L+  L    K  EA  + N +I+GGH+P++VTY +LL+ L    +
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGK 137

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 + S++   G  PD + +N +I+ FS+ G+M EA   F +M E G  PT  TYN+
Sbjct: 138 LKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNS 197

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ G+   G+      L   M R+G V PN+ T+N L+  +C   ++ EA  +  +M + 
Sbjct: 198 LLSGFSRKGEFGRVQSLFKDMLRQGCV-PNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  PDVV+YNT+       G+  +A+ ++ EM  +GV P+  +  I+I GY K G +  A
Sbjct: 257 GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                                 IK F EI  + G++            PD  +YSTI++ 
Sbjct: 317 ----------------------IKLFYEI-PKSGLE------------PDAFSYSTIIDC 341

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              AG +     +F DM   G  PDA     L  G  R +   ++ EL   M++    P 
Sbjct: 342 LCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPL 401

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +  +  ++   C     D   E+F ++ E G SP+++  + ++
Sbjct: 402 IPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVIL 444



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/441 (24%), Positives = 202/441 (45%), Gaps = 2/441 (0%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           ++Y  LL  L    R + ++   + +   G  P++  +  ++ +  ++   EEA   F  
Sbjct: 18  LSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRG 77

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M   G +P   +Y+ LI G     K +E+ +LL+ M  +G  +PN+ TY  L+   C   
Sbjct: 78  MAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMI-DGGHQPNVVTYGSLLSGLCKMG 136

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
            + EA ++  +M   G  PD V YN +   +++ G+  +A  +  EM   G  P   T  
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
            ++SG+ ++G+        + M   G  PN+  FN L+ GF ++ D      +   M+  
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
              PDV++Y+T+M    + G   + + +  +M ++G+ PD  +Y+IL  GY +    + A
Sbjct: 257 GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            +L   + +SG  P+   ++TII   C  G +  A  VF  M  +G +P+      L+ G
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNE 527
                +   + E+ Q M  F   P    + LL         + +   I  ++  +  + +
Sbjct: 377 LCRGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPD 436

Query: 528 MEAEEDIPVESLERLYHKEAT 548
           +E  + I +E+L R   KEA 
Sbjct: 437 VEISKVI-LETLRRSDDKEAA 456



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 196/391 (50%), Gaps = 5/391 (1%)

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           SQV  N     ++ +N ++   ++SG  +    T+  M  +G  P T TY  L++    A
Sbjct: 9   SQVHYN---HGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQA 65

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + EE+  +   M+ +G   PN+ +Y++L+   C  + + EA  ++++M   G +P+VVT
Sbjct: 66  QRFEEARSVFRGMAAQG-CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVT 124

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y ++ +   + G+  +A ++   M + G  P+G    ++I G+ K+G + EA R    M 
Sbjct: 125 YGSLLSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEML 184

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G  P +  +N L+ GF    +   V  +   M      P++ T++ +++ +   G M 
Sbjct: 185 EKGCIPTVFTYNSLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMV 244

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +F +M   G  PD  +Y+ L +G   + +P +A+ LL  MI SG  P++V +  +I
Sbjct: 245 EAHRLFLEMRSLGCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILI 304

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+   G++D AI++F ++ + G+ P+  ++ T++     A +   A  + + M A G  
Sbjct: 305 DGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSA 364

Query: 491 PQKSTFL-LLAEARRATGLTKEAKRILSKIK 520
           P  +  + L+    R   LT+  +   + +K
Sbjct: 365 PDAAVVIPLVIGLCRGERLTESCELFQAMVK 395



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 42/173 (24%), Positives = 80/173 (46%)

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
           N   ++Y+ ++   + +G  D     ++DM  AG  P+ + Y  L +   + Q  E+A  
Sbjct: 14  NHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARS 73

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +   M   G  PNV  ++ +I+G C    +D A E+ ++M + G  PN+ T+ +L+ G  
Sbjct: 74  VFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLC 133

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +  +   A ++   M   G  P    + +L +     G   EA R+  ++  K
Sbjct: 134 KMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEK 186


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 219/452 (48%), Gaps = 9/452 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S   LM+   + G    A++ F  +I+ G  P + +Y  LL  L +           
Sbjct: 269 SVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFT 328

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + +E +G++PD + +N + N F   G +  A     +M  +GL P   TY  LI G+   
Sbjct: 329 NDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQM 388

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  EES KL + M  +G +K ++ TY VL+ + C    I EA  ++H+M   G+KPD++T
Sbjct: 389 GNIEESFKLKEKMLSQG-LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLT 447

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+         G  ++A E+  EM    + PN   C  IISG  ++G I EA  +  ++ 
Sbjct: 448 YS--------RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVT 499

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           +  V   ++++N++I G+ ++ +          + E  ++P ++T+++++  +   G + 
Sbjct: 500 KSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLA 559

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  ++ D +   G+ P +  Y+ L  GY  E +     ++L  M      P  + +T ++
Sbjct: 560 EAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVV 619

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C +G +  ++++   M   G+ P+  T+ T++  + +A    +A ++   M    + 
Sbjct: 620 KGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQ 679

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+ +L       G  K+A R+L  ++++
Sbjct: 680 PSPVTYNVLINGLCVYGNLKDADRLLVTLQDQ 711



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 209/426 (49%), Gaps = 15/426 (3%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           ++N +   G   +  T   L+  L  Q R     + + +       P  + FNA+++ F 
Sbjct: 222 VYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFC 281

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           + G+++ A   F  M + GL P   +YN L+ G  +AG  EE+++  + M   G V+P++
Sbjct: 282 KMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHG-VEPDI 340

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            TYN+L   +     I+ AW V+ +M  +G+ PD+VTY  +   + Q G  +++ ++  +
Sbjct: 341 VTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEK 400

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M   G++ +  T  +++S  CK G+I EA+     M+  G+ P+L+ ++           
Sbjct: 401 MLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS----------- 449

Query: 334 RDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           R  V+E + L +E    R+ P+    S I++     G + + +  FD + K+ +  +   
Sbjct: 450 RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIIL 509

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+I+  GY +     +A      +IE G  P +V F ++I G+C  G +  A+++ D + 
Sbjct: 510 YNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIK 569

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
            HG+ P   T+ TLM GY E        ++L  M+A  + P + T+ ++ +     G   
Sbjct: 570 VHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLH 629

Query: 511 EAKRIL 516
           E+ ++L
Sbjct: 630 ESVQLL 635



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 95/421 (22%), Positives = 194/421 (46%), Gaps = 9/421 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ + T L++SL + G+  EA  + + +   G KP L+TY+       I+        + 
Sbjct: 409 SIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIE--------LY 460

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++    + P+S   +A+I+   E G + EA   F  + +S +      YN +I GY   
Sbjct: 461 EEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKL 520

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E+V+    +  +G + P + T+N L+  +C +  + EA  ++  +   G+ P  VT
Sbjct: 521 GNIGEAVRSYKQIIEKG-ISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVT 579

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+   Y + G+     +++ EME   ++P   T  +++ G CKEG++ E+++  + M 
Sbjct: 580 YTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMY 639

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P+ + +N +I+ F +  D     ++   M +  + P  +TY+ ++N     G + 
Sbjct: 640 ARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVYGNLK 699

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               +   +    I+    AY+ + K +  + + + A      M+E GF  ++  ++ +I
Sbjct: 700 DADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDYSAVI 759

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +  C    +  A   F  M  HG+ P+      ++  +  +  P    EI  +M   G+ 
Sbjct: 760 NRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIKCGLL 819

Query: 491 P 491
           P
Sbjct: 820 P 820



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 76/325 (23%), Positives = 156/325 (48%), Gaps = 24/325 (7%)

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           D +++ ++ +  A+S +  + +A+    KMK   L  + +TYN+L+           +++
Sbjct: 165 DLNNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLY----------NLR 214

Query: 199 LLDLM------SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             D+M       +   V  N  T  +L+   C +  + +A   + +       P VV++N
Sbjct: 215 HTDIMWDVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFN 274

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            + + + + G  D A+     M   G+ P+  +  I++ G C  G ++EAL F   M+ +
Sbjct: 275 ALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENH 334

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           GV P++V +N+L  GF  +    G  +V+  M    +NPD++TY+ ++      G +++ 
Sbjct: 335 GVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEES 394

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            ++ + M   G+K     Y++L     +    ++A  LL  M   G  P+++ +      
Sbjct: 395 FKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTY------ 448

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPN 457
             S G+++ AIE++++MC   + PN
Sbjct: 449 --SRGAVEEAIELYEEMCSKRIYPN 471



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/351 (21%), Positives = 152/351 (43%), Gaps = 42/351 (11%)

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
            +++L  A+   + + +A  V+ KM    ++  + TYN++          D   +V  E+
Sbjct: 170 VWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRH---TDIMWDVYNEI 226

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM--KEYGVHPNLVIFNLLIKGFVEIM 332
           + +GV  N  T  I+I G C++ ++++A+ F R    +E+G                   
Sbjct: 227 KASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFG------------------- 267

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
                             P V++++ +M+ +   G +D  K  F  M K G+ PD ++Y+
Sbjct: 268 ------------------PSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYN 309

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           IL  G       E+A E    M   G  P++V +  + +G+   G +  A +V  +M  +
Sbjct: 310 ILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLN 369

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G++P+L T+  L+ G+ +      + ++ + M + G+     T+ +L  +   +G   EA
Sbjct: 370 GLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEA 429

Query: 513 KRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVS 563
             +L +++      ++       VE    LY +  +   YPN      ++S
Sbjct: 430 VILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCSKRIYPNSFVCSAIIS 480


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 225/476 (47%), Gaps = 44/476 (9%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+  EA      ++E G +P+L+TY+ L+  LT  KR    + ++ ++ + G  P+ I +
Sbjct: 298 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 357

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMS 204
           N +I++F E+G++ +A++    M   GL+ T+STYNTLIKGY   G+ + + +LL +++S
Sbjct: 358 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 417

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
              NV  N  ++  ++   C+      A   + +M    M P      T+ +   ++G+ 
Sbjct: 418 IGFNV--NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 475

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A E+  +  + G   + RT   ++ G C+ GK+ EA R  + +   G   + V +N L
Sbjct: 476 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 535

Query: 325 IKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           I G      +  +DE    + E     + PD  TYS ++        +++  + +DD  +
Sbjct: 536 ISG---CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 592

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G+ PD + YS++  G  + +  E+ +E    M+     PN V++  +I  +C  G +  
Sbjct: 593 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 652

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMW----------------------------------- 466
           A+E+ + M   G+SPN  T+ +L+                                    
Sbjct: 653 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 712

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           GY +  Q  + E +L+ M +  VHP K T+ ++       G   EA R+L++++ K
Sbjct: 713 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 768



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 191/398 (47%), Gaps = 1/398 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  +   L+    + G+   A+ +   ++  G   +  ++T+++  L     F+S    +
Sbjct: 388 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 447

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++    M P       +I+   + G   +A++ +++    G    T T N L+ G   A
Sbjct: 448 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 507

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK +E+ ++   +   G V   + +YN L+   C +K + EA+  + +M   G+KPD  T
Sbjct: 508 GKLDEAFRIQKEILGRGCVMDRV-SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 566

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +        + ++A +   + + NG+ P+  T  ++I G CK  + +E   F   M 
Sbjct: 567 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 626

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              V PN V++N LI+ +          E+   MK   ++P+  TY++++   S    ++
Sbjct: 627 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 686

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + K +F++M   G++P+   Y+ L  GY +  +  K E LL  M     HPN + +T +I
Sbjct: 687 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 746

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            G+  DG++  A  + ++M E G+ P+  T++  ++GY
Sbjct: 747 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 784



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 208/476 (43%), Gaps = 3/476 (0%)

Query: 48  NSKPTDSQPQTHCSFCMNKESCRTVRSM-TKLMNSLIERGKPQEAQAIFNNLIEGGHKPS 106
           +S+   +      S C ++E  R +  +  ++  +  +R     A  +F  L   G  PS
Sbjct: 155 DSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPS 214

Query: 107 LVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW 166
             T   LL +L     F         V + G+ PD   F   INAF + G +EEA+  F 
Sbjct: 215 KTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFS 273

Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
           KM+E+G+ P   T+NT+I G G+ G+ +E+    + M   G ++P L TY++LV+     
Sbjct: 274 KMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG-MEPTLITYSILVKGLTRA 332

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           K I +A+ V+ +M   G  P+V+ YN +  ++ + G  ++A E+   M   G+     T 
Sbjct: 333 KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY 392

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             +I GYCK G+   A R  + M   G + N   F  +I      +  D     +  M  
Sbjct: 393 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 452

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             ++P     +T+++     G   K  E++      G   D    + L  G     + ++
Sbjct: 453 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 512

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  +   ++  G   + V + T+ISG C    +D A    D+M + G+ P+  T+  L+ 
Sbjct: 513 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 572

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G     +   A +     K  G+ P   T+ ++ +       T+E +    ++ +K
Sbjct: 573 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 628



 Score =  145 bits (367), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 190/419 (45%), Gaps = 1/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++S IE G   +A  I + ++  G   +  TY TL+       + ++   ++ ++   G
Sbjct: 360 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 419

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            + +   F +VI         + A+    +M    ++P      TLI G    GK  +++
Sbjct: 420 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 479

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L      +G V  + RT N L+   C    + EA+ +  ++   G   D V+YNT+ + 
Sbjct: 480 ELWFQFLNKGFV-VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 538

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                + D+A   + EM   G++P+  T  I+I G     K++EA++F    K  G+ P+
Sbjct: 539 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 598

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  ++++I G  +    +   E    M    V P+ + Y+ ++ A+  +G +    E+ +
Sbjct: 599 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 658

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM   GI P++  Y+ L KG       E+A+ L   M   G  PNV  +T +I G+   G
Sbjct: 659 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 718

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            M +   +  +M    V PN  T+  ++ GY+       A  +L  M+  G+ P   T+
Sbjct: 719 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 777



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 159/341 (46%), Gaps = 7/341 (2%)

Query: 111 TTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE 170
           TTL++ L    + +    +  Q    G   D+   NA+++   E+G ++EA     ++  
Sbjct: 463 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 522

Query: 171 SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
            G      +YNTLI G     K +E+   LD M + G +KP+  TY++L+    N   + 
Sbjct: 523 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG-LKPDNYTYSILICGLFNMNKVE 581

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
           EA         +GM PDV TY+ +     +    ++ +E   EM    VQPN      +I
Sbjct: 582 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 641

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR-- 348
             YC+ G++  AL     MK  G+ PN   +  LIKG + I+ R  V+E   L +E R  
Sbjct: 642 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG-MSIISR--VEEAKLLFEEMRME 698

Query: 349 -VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            + P+V  Y+ +++ +   G M K + +  +M    + P+   Y+++  GY R+    +A
Sbjct: 699 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 758

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             LL  M E G  P+ + +   I G+   G +  A +  D+
Sbjct: 759 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 799



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 1/181 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           + +E Q  F+ ++    +P+ V Y  L+ A     R +    +   ++  G+ P+S  + 
Sbjct: 614 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 673

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           ++I   S    +EEA   F +M+  GL P    Y  LI GYG  G+  +   LL  M  +
Sbjct: 674 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 733

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            NV PN  TY V++  +  + N+TEA  ++++M   G+ PD +TY      Y + G   +
Sbjct: 734 -NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 792

Query: 267 A 267
           A
Sbjct: 793 A 793



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 3/128 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  S+ K M S+I R   +EA+ +F  +   G +P++  YT L+       +   +  ++
Sbjct: 671 TYTSLIKGM-SIISR--VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 727

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++    + P+ I +  +I  ++  GN+ EA     +M+E G+ P + TY   I GY   
Sbjct: 728 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 787

Query: 191 GKPEESVK 198
           G   E+ K
Sbjct: 788 GGVLEAFK 795


>gi|297832604|ref|XP_002884184.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330024|gb|EFH60443.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 829

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 130/523 (24%), Positives = 226/523 (43%), Gaps = 77/523 (14%)

Query: 68  SCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           +C TV      +++    G  +EA+  F  L   G++P  VTY  LL        +    
Sbjct: 290 TCSTV------LSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEAL 343

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           S++ ++EEN    DS+ +N ++ A++ +G  +EA      M + G+ P   TY T+I  Y
Sbjct: 344 SVLKEMEENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAITYTTVIDAY 403

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVL---------------------------- 219
           G AGK +E++KL   M   G V PN  TYN +                            
Sbjct: 404 GKAGKEDEALKLFYSMKEAGCV-PNTCTYNAVLSMLGKKSRSNEMIKMLCDMKSNGCFPN 462

Query: 220 ------VRAWCNEKNITEAWN-VMHKMAASGMKPDVVTYNTIATAY-------------- 258
                 + A C  K + +  N V  +M + G +PD  T+NT+ +AY              
Sbjct: 463 RATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEVDASKMYG 522

Query: 259 ---------------------AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
                                A+ G+    E VI +M+  G +P   +  +++  Y K G
Sbjct: 523 EMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGG 582

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
                 R    + E  + P+ ++   L+    +     G +    L K+    PD++ ++
Sbjct: 583 NYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFN 642

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           ++++ ++     D+ + I   + + G+ PD   Y+ L   YVR  E  KAEE+L T+ +S
Sbjct: 643 SMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEILKTLEKS 702

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
              P++V + T+I G+C  G M  A+ +  +M E G+ P + T+ T + GY+        
Sbjct: 703 QLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMYGEI 762

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           E++++ M      P + TF ++ +     G   EA   +SKIK
Sbjct: 763 EDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIK 805



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 238/522 (45%), Gaps = 72/522 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           VR+ T ++++    GK ++A  +F  + E G  P+LVTY  +L     + + +  I  ++
Sbjct: 217 VRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVL 276

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+  D    + V++A +  G + EA D F ++K  G  P T TYN L++ +G A
Sbjct: 277 EEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPGTVTYNALLQVFGKA 336

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E++ +L  M  E N   +  TYN LV A+       EA  V+  M   G+ P+ +T
Sbjct: 337 GVYTEALSVLKEM-EENNCPADSVTYNELVAAYARAGFSKEAAVVIEMMTQKGVMPNAIT 395

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+  AY + G+ D+A ++   M+  G  PN  T   ++S   K+ +  E ++    MK
Sbjct: 396 YTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDMK 455

Query: 311 EYGVHPNLVIFNLLI-----KGFVEIM--------------DRDGVDEVLAL-------- 343
             G  PN   +N ++     KG  + +              DRD  + +++         
Sbjct: 456 SNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSEV 515

Query: 344 --------MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
                   M     N  V TY+ ++NA +  G     + +  DM   G KP   +YS++ 
Sbjct: 516 DASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLML 575

Query: 396 KGYVREQE---PEKAEE------------LLMTMI--------------------ESGFH 420
           + Y +       E+ EE            LL T++                    + G+ 
Sbjct: 576 QCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYK 635

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P++VIF +++S +  +   D+A  +   + E G++P+L T+ +LM  Y    + W+AEEI
Sbjct: 636 PDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAEEI 695

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           L+ ++   + P   ++  + +     GL +EA R+LS++  +
Sbjct: 696 LKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTER 737



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 199/414 (48%), Gaps = 1/414 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++++  + GK  EA  +F ++ E G  P+  TY  +L+ L  + R N +  ++  +
Sbjct: 395 TYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSMLGKKSRSNEMIKMLCDM 454

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + NG  P+   +N ++      G  +     F +MK  G  P   T+NTLI  YG  G  
Sbjct: 455 KSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAYGRCGSE 514

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ K+   M+R G     + TYN L+ A   + +     NV+  M + G KP   +Y+ 
Sbjct: 515 VDASKMYGEMTRAG-FNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSL 573

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   YA+ G     E +   +    + P+      ++    K   +  + R     K++G
Sbjct: 574 MLQCYAKGGNYLGIERIEEGINEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG 633

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P++VIFN ++  F      D  + +L  + E  +NPD++TY+++M+ +   G   K +
Sbjct: 634 YKPDMVIFNSMLSIFTRNNMYDQAEGILQSIHEDGLNPDLVTYNSLMDMYVRRGECWKAE 693

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           EI   + K+ +KPD  +Y+ + KG+ R+   ++A  +L  M E G  P +  + T +SG+
Sbjct: 694 EILKTLEKSQLKPDLVSYNTVIKGFCRKGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGY 753

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            + G      +V + M ++   PN  TF+ ++ GY  A +   A + +  +K F
Sbjct: 754 TAMGMYGEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTF 807



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 91/386 (23%), Positives = 165/386 (42%), Gaps = 47/386 (12%)

Query: 177 TSTYNTLIKGYGIAGKPEESVKLLD---LMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
           T+   +L+KG   +G  E +V L +   L S  G +K +     +LVR    E   + A 
Sbjct: 143 TTDLVSLVKGLDDSGHWERAVFLFEWLVLSSNSGALKLDHHVIEILVRILGRESQYSVAA 202

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN----------- 282
            ++ K+       DV  Y TI  AY++ G+ ++A  +   M+  G  P            
Sbjct: 203 KLLDKIPLQDYMLDVRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVF 262

Query: 283 ---GR----------------------TCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
              GR                      TC  ++S   +EG ++EA  F   +K  G  P 
Sbjct: 263 GKMGRSWRKILGVLEEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKSCGYEPG 322

Query: 318 LVIFNLLIKGFVEIMDRDGV-DEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCK 373
            V +N L+    ++  + GV  E L+++KE   N    D +TY+ ++ A++ AGF  +  
Sbjct: 323 TVTYNALL----QVFGKAGVYTEALSVLKEMEENNCPADSVTYNELVAAYARAGFSKEAA 378

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            + + M + G+ P+A  Y+ +   Y +  + ++A +L  +M E+G  PN   +  ++S  
Sbjct: 379 VVIEMMTQKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSML 438

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
                 +  I++   M  +G  PN  T+ T++              + + MK+ G  P +
Sbjct: 439 GKKSRSNEMIKMLCDMKSNGCFPNRATWNTILALCGNKGMDKFVNRVFREMKSCGFEPDR 498

Query: 494 STFLLLAEARRATGLTKEAKRILSKI 519
            TF  L  A    G   +A ++  ++
Sbjct: 499 DTFNTLISAYGRCGSEVDASKMYGEM 524



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 3/160 (1%)

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           W  A F+ +   +  + G   +K D H   IL +   RE +   A +LL  +    +  +
Sbjct: 159 WERAVFLFEWLVLSSNSG--ALKLDHHVIEILVRILGRESQYSVAAKLLDKIPLQDYMLD 216

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA-EEIL 481
           V  +TTI+  +   G  ++AI +F++M E G SP L T+  ++  + +  + WR    +L
Sbjct: 217 VRAYTTILHAYSRTGKYEKAINLFERMKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVL 276

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           + M++ G+   + T   +  A    GL +EAK   +++K+
Sbjct: 277 EEMRSKGLKFDEFTCSTVLSACAREGLLREAKDFFAELKS 316


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 225/476 (47%), Gaps = 44/476 (9%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+  EA      ++E G +P+L+TY+ L+  LT  KR    + ++ ++ + G  P+ I +
Sbjct: 322 GRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVY 381

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMS 204
           N +I++F E+G++ +A++    M   GL+ T+STYNTLIKGY   G+ + + +LL +++S
Sbjct: 382 NNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLS 441

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
              NV  N  ++  ++   C+      A   + +M    M P      T+ +   ++G+ 
Sbjct: 442 IGFNV--NQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKH 499

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A E+  +  + G   + RT   ++ G C+ GK+ EA R  + +   G   + V +N L
Sbjct: 500 SKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTL 559

Query: 325 IKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           I G      +  +DE    + E     + PD  TYS ++        +++  + +DD  +
Sbjct: 560 ISG---CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 616

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G+ PD + YS++  G  + +  E+ +E    M+     PN V++  +I  +C  G +  
Sbjct: 617 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 676

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMW----------------------------------- 466
           A+E+ + M   G+SPN  T+ +L+                                    
Sbjct: 677 ALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALID 736

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           GY +  Q  + E +L+ M +  VHP K T+ ++       G   EA R+L++++ K
Sbjct: 737 GYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREK 792



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 191/398 (47%), Gaps = 1/398 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  +   L+    + G+   A+ +   ++  G   +  ++T+++  L     F+S    +
Sbjct: 412 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFV 471

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++    M P       +I+   + G   +A++ +++    G    T T N L+ G   A
Sbjct: 472 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEA 531

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK +E+ ++   +   G V   + +YN L+   C +K + EA+  + +M   G+KPD  T
Sbjct: 532 GKLDEAFRIQKEILGRGCVMDRV-SYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYT 590

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +        + ++A +   + + NG+ P+  T  ++I G CK  + +E   F   M 
Sbjct: 591 YSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMM 650

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              V PN V++N LI+ +          E+   MK   ++P+  TY++++   S    ++
Sbjct: 651 SKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 710

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + K +F++M   G++P+   Y+ L  GY +  +  K E LL  M     HPN + +T +I
Sbjct: 711 EAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 770

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            G+  DG++  A  + ++M E G+ P+  T++  ++GY
Sbjct: 771 GGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 808



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 208/476 (43%), Gaps = 3/476 (0%)

Query: 48  NSKPTDSQPQTHCSFCMNKESCRTVRSM-TKLMNSLIERGKPQEAQAIFNNLIEGGHKPS 106
           +S+   +      S C ++E  R +  +  ++  +  +R     A  +F  L   G  PS
Sbjct: 179 DSRVAIADAMASLSLCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPS 238

Query: 107 LVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW 166
             T   LL +L     F         V + G+ PD   F   INAF + G +EEA+  F 
Sbjct: 239 KTTCNILLTSLVRANEFQKCCEAFDVVCK-GVSPDVYLFTTAINAFCKGGKVEEAVKLFS 297

Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
           KM+E+G+ P   T+NT+I G G+ G+ +E+    + M   G ++P L TY++LV+     
Sbjct: 298 KMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERG-MEPTLITYSILVKGLTRA 356

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           K I +A+ V+ +M   G  P+V+ YN +  ++ + G  ++A E+   M   G+     T 
Sbjct: 357 KRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTY 416

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             +I GYCK G+   A R  + M   G + N   F  +I      +  D     +  M  
Sbjct: 417 NTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLL 476

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             ++P     +T+++     G   K  E++      G   D    + L  G     + ++
Sbjct: 477 RNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDE 536

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  +   ++  G   + V + T+ISG C    +D A    D+M + G+ P+  T+  L+ 
Sbjct: 537 AFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILIC 596

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           G     +   A +     K  G+ P   T+ ++ +       T+E +    ++ +K
Sbjct: 597 GLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSK 652



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 190/419 (45%), Gaps = 1/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++S IE G   +A  I + ++  G   +  TY TL+       + ++   ++ ++   G
Sbjct: 384 LIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIG 443

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            + +   F +VI         + A+    +M    ++P      TLI G    GK  +++
Sbjct: 444 FNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAL 503

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L      +G V  + RT N L+   C    + EA+ +  ++   G   D V+YNT+ + 
Sbjct: 504 ELWFQFLNKGFV-VDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISG 562

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                + D+A   + EM   G++P+  T  I+I G     K++EA++F    K  G+ P+
Sbjct: 563 CCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPD 622

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  ++++I G  +    +   E    M    V P+ + Y+ ++ A+  +G +    E+ +
Sbjct: 623 VYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRE 682

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM   GI P++  Y+ L KG       E+A+ L   M   G  PNV  +T +I G+   G
Sbjct: 683 DMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLG 742

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            M +   +  +M    V PN  T+  ++ GY+       A  +L  M+  G+ P   T+
Sbjct: 743 QMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITY 801



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 157/337 (46%), Gaps = 7/337 (2%)

Query: 111 TTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE 170
           TTL++ L    + +    +  Q    G   D+   NA+++   E+G ++EA     ++  
Sbjct: 487 TTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILG 546

Query: 171 SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
            G      +YNTLI G     K +E+   LD M + G +KP+  TY++L+    N   + 
Sbjct: 547 RGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRG-LKPDNYTYSILICGLFNMNKVE 605

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
           EA         +GM PDV TY+ +     +    ++ +E   EM    VQPN      +I
Sbjct: 606 EAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLI 665

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR-- 348
             YC+ G++  AL     MK  G+ PN   +  LIKG + I+ R  V+E   L +E R  
Sbjct: 666 RAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG-MSIISR--VEEAKLLFEEMRME 722

Query: 349 -VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            + P+V  Y+ +++ +   G M K + +  +M    + P+   Y+++  GY R+    +A
Sbjct: 723 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 782

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
             LL  M E G  P+ + +   I G+   G +  A +
Sbjct: 783 SRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 88/181 (48%), Gaps = 1/181 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           + +E Q  F+ ++    +P+ V Y  L+ A     R +    +   ++  G+ P+S  + 
Sbjct: 638 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 697

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           ++I   S    +EEA   F +M+  GL P    Y  LI GYG  G+  +   LL  M  +
Sbjct: 698 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 757

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            NV PN  TY V++  +  + N+TEA  ++++M   G+ PD +TY      Y + G   +
Sbjct: 758 -NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 816

Query: 267 A 267
           A
Sbjct: 817 A 817



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 62/128 (48%), Gaps = 3/128 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  S+ K M S+I R   +EA+ +F  +   G +P++  YT L+       +   +  ++
Sbjct: 695 TYTSLIKGM-SIISR--VEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLL 751

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++    + P+ I +  +I  ++  GN+ EA     +M+E G+ P + TY   I GY   
Sbjct: 752 REMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQ 811

Query: 191 GKPEESVK 198
           G   E+ K
Sbjct: 812 GGVLEAFK 819


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 189/391 (48%), Gaps = 1/391 (0%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           TY  LL  L          ++ + +  +G  PDS  ++ +++    +G   EA+      
Sbjct: 146 TYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDA 205

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
              G  P  + YN LI GY   G  E ++ +   M  +G + PN+RTY  L+  +C    
Sbjct: 206 MGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCL-PNVRTYTQLICGFCKSGK 264

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           +  A  +  +M  +G+ P+VVTY T+       G  + A  ++  ME  G+ PN  TC +
Sbjct: 265 VERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLV 324

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +I   CK G+I+EA +F  ++ + G+  N VI+  +I    +    DG   ++  +    
Sbjct: 325 LIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEG 384

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             PD   YS++++       + +   + +DM ++G++ +A  ++IL   ++RE   +  +
Sbjct: 385 FVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPK 444

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            +   M  +G  P+VV +T  I  +C DG M+ A  +  +M +HGV PNL T+ TL+ GY
Sbjct: 445 MISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGY 504

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           +      +A   L+ M   G  P   ++ +L
Sbjct: 505 ANLGLVSQAFSSLKNMIDNGCKPNDESYTVL 535



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/519 (22%), Positives = 215/519 (41%), Gaps = 53/519 (10%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C RT  +   L+  L   G  +EA A+F  +   G  P    Y+ ++  L    R
Sbjct: 135 MPQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGR 194

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                ++++     G  P+   +NA+I+ +  +G++E A+D F  M+  G  P   TY  
Sbjct: 195 AGEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQ 254

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+  +GK E ++ L   M  E  + PN+ TY  L++  C+E ++  A+ ++H M A 
Sbjct: 255 LICGFCKSGKVERAMVLYSRMI-EAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEAC 313

Query: 243 GMKPD-----------------------------------VVTYNTIATAYAQNGEADQA 267
           G+ P+                                    V Y ++  A  ++G+ D A
Sbjct: 314 GLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGA 373

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
             ++ ++   G  P+      +I G C+E K+ EA+     M E GV  N V F +LI  
Sbjct: 374 HNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDK 433

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
            +     D    +   M    V PDV+TY+  + ++   G M+  + +   M   G++P+
Sbjct: 434 HLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPN 493

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI---- 443
              Y+ L KGY       +A   L  MI++G  PN   +T ++       S    +    
Sbjct: 494 LTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSI 553

Query: 444 ------------EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
                       E+ +++ +   S     ++  +   S+  +   A+  L  M++  + P
Sbjct: 554 SLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTP 613

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEA 530
            +  +  + E      L KEA R L  +  +     +E+
Sbjct: 614 SEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLES 652



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 111/506 (21%), Positives = 206/506 (40%), Gaps = 88/506 (17%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  + C   VR+ T+L+    + GK + A  +++ +IE G  P++VTYTTL+     +  
Sbjct: 240 MQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGH 299

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 ++  +E  G+ P+      +I+A  + G +EEA      + + G+      Y +
Sbjct: 300 LEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTS 359

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH----- 237
           +I     +GK + +  L+  +  EG V P+   Y+ L+   C E  + EA ++++     
Sbjct: 360 MIDALCKSGKFDGAHNLMQKIITEGFV-PDAHMYSSLIDGLCRENKLLEAISLLNDMIES 418

Query: 238 ------------------------------KMAASGMKPDVVTYNTIATAYAQNGEADQA 267
                                         +MAA+G+KPDVVTY     +Y Q+G  + A
Sbjct: 419 GVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDA 478

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN----LVIFNL 323
           E ++++M  +GV+PN  T   +I GY   G + +A    + M + G  PN     V+  L
Sbjct: 479 ESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKPNDESYTVLLGL 538

Query: 324 LIK------------GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           L+K               +I+D   ++E+L  + + + +     Y   +   S    +++
Sbjct: 539 LLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDCFIRCLSKVDRLEE 598

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            K     M  A + P    Y+ + +   R +  ++A   L +M++  + P +  +  II 
Sbjct: 599 AKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRNYLPRLESYRFIIC 658

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             C +GS   A  +F               + L   Y+     W+               
Sbjct: 659 ALCEEGSFHTAKSIFG--------------DILSKEYNRDEIAWK--------------- 689

Query: 492 QKSTFLLLAEARRATGLTKEAKRILS 517
                 +L +     G T +  R+LS
Sbjct: 690 ------ILIDGLLQKGNTADCSRLLS 709



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/313 (26%), Positives = 140/313 (44%), Gaps = 6/313 (1%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P +R  N L+ A      +++    M  +AA     ++ TY T+  AY   G+   A+  
Sbjct: 41  PPIRCLNTLLMALARHGMLSD----MESLAARMPVRNLHTYTTLINAYCHAGDLPAAKRH 96

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +  +   G+ P+       + GYC+ G    A R    M + G       +  L++G   
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 331 I-MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
             M R+ +  V A M      PD   YS +++    AG   +   +  D    G  P+  
Sbjct: 157 AGMVREAM-AVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVA 215

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+ L  GY    + E A ++   M   G  PNV  +T +I G+C  G ++RA+ ++ +M
Sbjct: 216 VYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRM 275

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
            E G++PN+ T+ TL+ G         A  +L  M+A G+ P + T L+L +A    G  
Sbjct: 276 IEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRI 335

Query: 510 KEAKRILSKIKNK 522
           +EA++ L  +  K
Sbjct: 336 EEAQQFLGSLVQK 348



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/335 (22%), Positives = 139/335 (41%), Gaps = 17/335 (5%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L++ L    K  EA ++ N++IE G + + V +T L+     + R +S   I  ++  
Sbjct: 393 SSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAA 452

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ PD + +   I ++ + G ME+A     +M + G+ P  +TYNTLIKGY   G   +
Sbjct: 453 AGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQ 512

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE-------AWNVMHKMAASGMKPDV 248
           +   L  M   G  KPN  +Y VL+     + +  +        W ++       +  +V
Sbjct: 513 AFSSLKNMIDNG-CKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEV 571

Query: 249 V---------TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
           +          Y+      ++    ++A+  +V M+   + P+      +I    +   +
Sbjct: 572 IKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLL 631

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
           KEALRF  +M +    P L  +  +I    E         +   +     N D I +  +
Sbjct: 632 KEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKIL 691

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           ++     G    C  +   M +   +P +  YS L
Sbjct: 692 IDGLLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 51/272 (18%), Positives = 110/272 (40%), Gaps = 23/272 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T  + S  + G+ ++A+++   +I+ G +P+L TY TL+         +   S + 
Sbjct: 459 VVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLK 518

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMD---TFWKMKESGL-------------TP 175
            + +NG  P+   +  ++    +  +  + +    + WK+ +  +             + 
Sbjct: 519 NMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSS 578

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
            +  Y+  I+      + EE+   L  M +  N+ P+   Y  ++      K + EA   
Sbjct: 579 ASYVYDCFIRCLSKVDRLEEAKSFLVGM-QSANLTPSEDVYTCMIECCYRMKLLKEALRF 637

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV---IVEMEHNGVQPNGRTCGIIISG 292
           +  M      P + +Y  I  A  + G    A+ +   I+  E+N  +   +   I+I G
Sbjct: 638 LDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWK---ILIDG 694

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
             ++G   +  R    M+E    P   I++ L
Sbjct: 695 LLQKGNTADCSRLLSFMEEQNCRPGSAIYSRL 726


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/498 (26%), Positives = 226/498 (45%), Gaps = 36/498 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+   +  G   +A   F  +   G  PS+ T   LL  L  +++  ++     ++    
Sbjct: 104 LIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGAVWLFFKEMLARR 163

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   FN +IN     G +++A     KM+ESG  P+  TYNT++  Y   G+ + ++
Sbjct: 164 VCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRYKAAL 223

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+D M  +G ++ +  TYN+LV   C      + + ++ KM    + P+ +TYN+I   
Sbjct: 224 ELIDQMGSKG-IEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIING 282

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G+   A  +  EM    + PN  T   +I G+C +G  ++AL     M+  G  PN
Sbjct: 283 FVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPN 342

Query: 318 LVIFNLLIKGFVE---------IMDR-----------------DGV------DEVLALMK 345
            V ++ L+ G            I++R                 DG+      +E + L+ 
Sbjct: 343 EVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLD 402

Query: 346 EFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
           +     V PDV+T+S ++N +   G +   KEI   M KAG+ P++  Y+ L   Y +  
Sbjct: 403 KMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTG 462

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           +  +A ++ + M   G+  N  I   ++S  C DG +  A   F  M + G  PN  TF+
Sbjct: 463 DVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFD 522

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            ++ GY  +    +A  +   M   G HP   T+  L +A    G  KEAKR+L K+   
Sbjct: 523 CIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYI 582

Query: 523 ERTNEMEAEEDIPVESLE 540
               +      I VE+ +
Sbjct: 583 PSAVDTVTYNTILVETFK 600



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 209/419 (49%), Gaps = 1/419 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           + +  C  V +   L+N L   GK ++A  +   + E G+ PS+VTY T+L     + R+
Sbjct: 160 LARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRY 219

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            +   ++ Q+   G++ D+  +N +++   ++    +      KM++  ++P   TYN++
Sbjct: 220 KAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSI 279

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G+   GK   + ++   MS   N+ PN  TYN L+   C++ N  +A  ++  M A+G
Sbjct: 280 INGFVKEGKIGAATRIFQEMSML-NLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATG 338

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
            KP+ V+Y+ +     ++ + + ++ ++  M  NG+         +I G C+ G + E++
Sbjct: 339 PKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESV 398

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
           +    M + GV P++V F++LI GF  +     V E++  M +  + P+ I Y+T++  +
Sbjct: 399 KLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNY 458

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G + +  +++  M + G   +    ++L     ++ +   AE     M + G  PN 
Sbjct: 459 CKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNS 518

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           + F  II+G+ + G+  +A  +FD+M + G  P+  T+  L+     A +   A+ +L 
Sbjct: 519 ITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLD 577



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/487 (24%), Positives = 224/487 (45%), Gaps = 34/487 (6%)

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF----------------FN 146
           H  S+ T+  + A L     + +  SI+  + + G+   S+F                F+
Sbjct: 48  HMLSITTHILVRARL-----YENAKSILKHLSQMGVGSKSVFGALMNTYPLCKSNPSVFD 102

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL--DLMS 204
            +I  +   G + +A++TF  M   G  P+  T N L+ G  +  +   +V L   ++++
Sbjct: 103 LLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLL-GKLVKERKVGAVWLFFKEMLA 161

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R   V P++ T+N+L+   C E  + +A  ++ KM  SG  P VVTYNT+   Y + G  
Sbjct: 162 RR--VCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKKGRY 219

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
             A E+I +M   G++ +  T  +++   CK  +  +     + M++  + PN + +N +
Sbjct: 220 KAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSI 279

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I GFV+         +   M    + P+ +TY+ +++     G  ++   I + M   G 
Sbjct: 280 INGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGP 339

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           KP+  +YS L  G  R  + E ++ +L  M  +G     + +T +I G C +G ++ +++
Sbjct: 340 KPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVK 399

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + DKM + GV P++ TF  L+ G+    +    +EI+  M   G+ P    +  L     
Sbjct: 400 LLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYC 459

Query: 505 ATGLTKEAKRI---LSKI---KNKERTNEMEAE--EDIPVESLERLYHKEATTASYPNLL 556
            TG   EA ++   +S+I    N    N + +   +D  V   E  +H  +   + PN +
Sbjct: 460 KTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSI 519

Query: 557 QIPNVVS 563
               +++
Sbjct: 520 TFDCIIN 526



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 108/457 (23%), Positives = 196/457 (42%), Gaps = 38/457 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +++ L   G   E+  + + +++ G  P +VT++ L+       +  ++  I+ ++ +
Sbjct: 382 TAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYK 441

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ P+SI +  +I  + ++G++ EA   +  M   G        N L+      GK   
Sbjct: 442 AGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGV 501

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP--------- 246
           +      MS+ GNV PN  T++ ++  + N  N  +A+++  +M  +G  P         
Sbjct: 502 AEYFFHHMSKIGNV-PNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLL 560

Query: 247 --------------------------DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
                                     D VTYNTI     ++G    A  +  EM    V 
Sbjct: 561 KALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVL 620

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYG-VHPNLVIFNLLIKGFVEIMDRDGVDE 339
           P+  T  II +G  + GK+  AL F   +   G V P  V++   + G            
Sbjct: 621 PDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALY 680

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM-GKAGIKPDAHAYSILAKGY 398
               M++  +  D+I  + I+N +S  G M K  +IF  M     I P    Y+IL  GY
Sbjct: 681 FCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGY 740

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +++   K   L   M+ +G  P+ +   ++I G+C    +D  +++  KM   GV+ + 
Sbjct: 741 AKKKNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQ 800

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            TF  L+  Y E  +  +A +++ IM  F + P  +T
Sbjct: 801 CTFNMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTT 837



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/387 (24%), Positives = 179/387 (46%), Gaps = 5/387 (1%)

Query: 82   LIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDP 140
            LI RGK   A   + NL+ +G   P  V YTT +  L    +  +       +E+NG+  
Sbjct: 633  LIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCA 692

Query: 141  DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT--PTTSTYNTLIKGYGIAGKPEESVK 198
            D I  N ++N +S  G M +A D F  M  SG+T  P+ +TYN L+ GY       +   
Sbjct: 693  DLIATNVILNGYSRMGKMAKAGDIF-TMMWSGITISPSLATYNILLHGYAKKKNLSKCSN 751

Query: 199  LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
            L ++M R G + P+  T + L+  +C    +     ++ KM   G+  D  T+N +   Y
Sbjct: 752  LYNIMMRTG-IFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKY 810

Query: 259  AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
             +  E  +A +++  M    + P+  T   IIS   +   ++E+      M E G  P+ 
Sbjct: 811  CETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDR 870

Query: 319  VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
              +  L+     +    G  ++   M+   ++   +  S ++   +  G +++ K + D 
Sbjct: 871  RQYIALVNRMCRMGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDF 930

Query: 379  MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
            M +  + P    ++ L   + R +   +A +L  TM       +V+ +  +ISG C+DG 
Sbjct: 931  MLRKSLIPTIATFTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGD 990

Query: 439  MDRAIEVFDKMCEHGVSPNLKTFETLM 465
            +  A++++ ++ + G+ PN+ T+  L+
Sbjct: 991  VASALKLYKEIKQRGLWPNMTTYCILI 1017



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 108/496 (21%), Positives = 204/496 (41%), Gaps = 71/496 (14%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            ++N     G   +A ++F+ +I+ GH PS  TY  LL AL    +F     ++ ++    
Sbjct: 524  IINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIP 583

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
               D++ +N ++    +SG + +A+  F +M +  + P + TY  +  G    GK   ++
Sbjct: 584  SAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAAL 643

Query: 198  KLLDLMSREGNVKPNLRTYNVLV----RA--------WCN--EKN-----------ITEA 232
                 +  +G V P    Y   V    RA        +C   EKN           I   
Sbjct: 644  HFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNG 703

Query: 233  WNVMHKMAASG-----------MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
            ++ M KMA +G           + P + TYN +   YA+     +   +   M   G+ P
Sbjct: 704  YSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFP 763

Query: 282  NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
            +  TC  +I G+CK   +   L+  + M   GV  +   FN+LI  + E  +     +++
Sbjct: 764  DKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLV 823

Query: 342  ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY---------- 391
             +M  F + PD+ T+ +I++  S    + +   +  +M + G  PD   Y          
Sbjct: 824  NIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRM 883

Query: 392  -------------------------SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
                                     S L +G  +  + E+A+ +L  M+     P +  F
Sbjct: 884  GHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATF 943

Query: 427  TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            TT++  +C + S+  A+++ D M    V  ++  +  L+ G         A ++ + +K 
Sbjct: 944  TTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQ 1003

Query: 487  FGVHPQKSTFLLLAEA 502
             G+ P  +T+ +L +A
Sbjct: 1004 RGLWPNMTTYCILIDA 1019


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 216/417 (51%), Gaps = 10/417 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++T L+  L  +G+ ++A    + L+  G +   V+Y TL+  +       +   ++ ++
Sbjct: 135 TLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLLRRI 194

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +    +P+ + +N +I+   +   + EA + F +M   G++    TY+ +I G+ I GK 
Sbjct: 195 DGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKL 254

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E++  L+ M  +  + P++  YN LV A   E  + EA NV+  +  + +KP+V+TYNT
Sbjct: 255 TEALGFLNEMVLKA-INPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNT 313

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   YA++        V   +   GV P+  +  I+I+  CK  +++EAL   + M +  
Sbjct: 314 LIDGYAKH--------VFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQKN 365

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + PN V +N LI G  +        +++  M +   + +VITY++++N     G +DK  
Sbjct: 366 MVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDKAI 425

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYV-REQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            + + M   GI+PD +  +IL  G + + +  + A+ L   +++ G+HPNV  +  II G
Sbjct: 426 ALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIIIYG 485

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            C +G +D A  +  KM + G SPN  TF+ ++    E  +  +AE++L  M A G+
Sbjct: 486 HCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGL 542



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/462 (23%), Positives = 212/462 (45%), Gaps = 43/462 (9%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           F+ ++   H P ++ +  +L +    K + ++ S+  ++E   + PD    N +IN F  
Sbjct: 51  FHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCH 110

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN------ 208
            G +  A     K+ + G  P T T  TLIKG  + G+ ++++   D +  +G       
Sbjct: 111 LGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVS 170

Query: 209 ----------------------------VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
                                        +PN+  YN ++   C  K ++EA N+  +M+
Sbjct: 171 YGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMS 230

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
             G+  +VVTY+ I   +   G+  +A   + EM    + P+      ++    KEGK+K
Sbjct: 231 VKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVK 290

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           EA      + +  + PN++ +N LI G+ +      V   + LM    V PDV +Y+ ++
Sbjct: 291 EAKNVLAVIVKTCLKPNVITYNTLIDGYAK-----HVFNAVGLMG---VTPDVWSYNIMI 342

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           N       +++   ++ +M +  + P+   Y+ L  G  +      A +L+  M + G H
Sbjct: 343 NRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHH 402

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG-YSEARQPWRAEE 479
            NV+ + ++I+G C +G +D+AI + +KM + G+ P++ T   L+ G   + ++   A+ 
Sbjct: 403 ANVITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQG 462

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           + Q +   G HP   T+ ++       GL  EA  + SK+++
Sbjct: 463 LFQDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMED 504



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/396 (21%), Positives = 179/396 (45%), Gaps = 34/396 (8%)

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
           N+++A+  F +M     TP    +N ++  +         V L   +  +  ++P+  T 
Sbjct: 43  NVDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKA-IQPDFFTL 101

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N+L+  +C+   I  A++V+ K+   G +PD VT  T+       G+  +A     ++  
Sbjct: 102 NILINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLA 161

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G + +  + G +I+G CK G+ + A++  R +      PN+V++N +I    +   R  
Sbjct: 162 QGFRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCK---RKL 218

Query: 337 VDEVLALMKEFRV---NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
           V E   L  E  V   + +V+TYS I++ +   G + +     ++M    I PD + Y+ 
Sbjct: 219 VSEACNLFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNT 278

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW-------------------- 433
           L     +E + ++A+ +L  ++++   PNV+ + T+I G+                    
Sbjct: 279 LVDALHKEGKVKEAKNVLAVIVKTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSY 338

Query: 434 -------CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
                  C    ++ A+ ++ +M +  + PN  T+ +L+ G  ++ +   A +++  M  
Sbjct: 339 NIMINRLCKIKRVEEALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHD 398

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            G H    T+  L       G   +A  +++K+K++
Sbjct: 399 RGHHANVITYNSLINGLCKNGQLDKAIALINKMKDQ 434



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 1/140 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ-KRFNSIHSIM 130
           V +   L+N L + G+  +A A+ N + + G +P + T   LL  L  + KR  +   + 
Sbjct: 405 VITYNSLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLF 464

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + + G  P+   +N +I    + G ++EA     KM++SG +P   T+  +I      
Sbjct: 465 QDLLDKGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEK 524

Query: 191 GKPEESVKLLDLMSREGNVK 210
           G+ +++ KLL  M   G +K
Sbjct: 525 GETDKAEKLLCEMIARGLLK 544


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 186/379 (49%), Gaps = 13/379 (3%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEEN-GMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           TY  L+ A  +     +   ++ ++E+  GM P    +N  ++A  +SG + EAM+    
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           MK+    P   T+NTLI G   AG+ +E+ ++LD M R G    NL TYN L+    +  
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSG-FAANLVTYNTLINGLSSAG 138

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN-GVQPNGRTC 286
              EA  VM  M  +   PD  TYN I   + ++GE D+A   + EM+   G  P+  T 
Sbjct: 139 RSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195

Query: 287 GIIISGYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
            I+I+G CK   +++A    + M        ++V FN L+ G+ +  D D   E+L+ M 
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           E    PDV+TYSTI++     G +DK   + + M   G KPD   Y++L  G  +  +  
Sbjct: 256 EHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMV 315

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +A  L+  M+E G  PN V ++ +  G C    +D A ++   + + G   ++  FETL+
Sbjct: 316 EACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375

Query: 466 WGYSE------ARQPWRAE 478
               +      A Q W+ E
Sbjct: 376 LSVKKRLLDRAAFQKWKLE 394



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 185/374 (49%), Gaps = 11/374 (2%)

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           TY  L++ + +AG+ + ++ LL  M ++  + P    YN  V A C    + EA  V+  
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M     KPDVVT+NT+     + G  D+A++V+ EME +G   N  T   +I+G    G+
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR----VNPDVI 354
             EA+   + M      P+   +N +I GF +  +   +D     ++E +     +PD  
Sbjct: 140 SGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGE---IDRAYGFLEEMKQRAGCSPDTF 193

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDM-GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           TYS ++N    +  + K  E+  +M G+        A++ L  GY + Q+ ++A ELL +
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M+E G  P+VV ++TII G C  G +D+   + +KM   G  P++ T+  L+ G  +A +
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEED 533
              A  +++ M   G  P   T+ L+ +          A  +L+ I++K R  ++ A E 
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFET 373

Query: 534 IPVESLERLYHKEA 547
           + +   +RL  + A
Sbjct: 374 LLLSVKKRLLDRAA 387



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 83/319 (26%), Positives = 149/319 (46%), Gaps = 39/319 (12%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            +++L + GK  EA  +  N+ +G  KP +VT+ TL+A L    R +    ++ ++E +G
Sbjct: 60  FVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSG 119

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              + + +N +IN  S +G   EA+     M     TP T TYN +I G+  +G+ + + 
Sbjct: 120 FAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAY 176

Query: 198 KLLDLMSREGNVKPNLRTY------------------------------------NVLVR 221
             L+ M +     P+  TY                                    N LV 
Sbjct: 177 GFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVD 236

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
            +C  +++  A  ++  M   G  PDVVTY+TI     + G+ D+   ++ +M   G +P
Sbjct: 237 GYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKP 296

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T  ++++G CK GK+ EA R  + M E G  PN V ++L+  G  +I   D  +++L
Sbjct: 297 DVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLL 356

Query: 342 ALMKEFRVNPDVITYSTIM 360
             +++     DV+ + T++
Sbjct: 357 TSIRDKGRVTDVVAFETLL 375



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 84/331 (25%), Positives = 154/331 (46%), Gaps = 6/331 (1%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G  P+   Y   + AL    +      ++  +++    PD + FN +I    ++G ++EA
Sbjct: 49  GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
                +M+ SG      TYNTLI G   AG+  E+V ++  M+      P+ +TYN ++ 
Sbjct: 109 QQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMT----TTPDTQTYNAIIH 164

Query: 222 AWCNEKNITEAWNVMHKMAA-SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM-EHNGV 279
            +C    I  A+  + +M   +G  PD  TY+ +     ++    +A+E++ EM      
Sbjct: 165 GFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDC 224

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
             +      ++ GYCK   +  A     +M E+G  P++V ++ +I G     D D    
Sbjct: 225 CASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFA 284

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +L  M      PDV+TY+ ++     AG M +   +   M + G  P+A  YS++  G  
Sbjct: 285 LLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLC 344

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  + + A +LL ++ + G   +VV F T++
Sbjct: 345 KIDKLDMANDLLTSIRDKGRVTDVVAFETLL 375


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/481 (23%), Positives = 222/481 (46%), Gaps = 38/481 (7%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           +L+  L  RG+P +A  +       G + +  TY  L+              ++  +  +
Sbjct: 101 RLVRDLCRRGRPADAARVVEAC---GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAH 157

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
                +   N +I+A  E G + +A+     M   G  P   TYN L++         ++
Sbjct: 158 VQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQA 217

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++L+D M  EG  +PN  TYNV++ A C E ++ +A  +++ + + G KP+ V YNT+  
Sbjct: 218 LELIDFMRAEG-CEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLK 276

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            +        A+E++ EM      PN  T  +II+  C++G +++   +   M ++G   
Sbjct: 277 GFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTA 336

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N+V +N +I G  E  + D   E+L+ M+ F   PD++TY+T++    +A   +  +E+ 
Sbjct: 337 NVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELM 396

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             M +    PD   ++ +   + ++    +A E+   M E G +PN   ++TII G    
Sbjct: 397 IKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKA 456

Query: 437 GSMDRAIEVFDKMC----------------------------------EHGVSPNLKTFE 462
           G M++A+E+ ++M                                   + G+SP    + 
Sbjct: 457 GKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYN 516

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           T++ G     +   A ++L  M + G  P +ST+++L E     G +KEA+ +LS++ ++
Sbjct: 517 TVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSR 576

Query: 523 E 523
           +
Sbjct: 577 D 577



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 188/417 (45%), Gaps = 40/417 (9%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD    N ++      G      D    ++  G   T +TY  L+ GY  AG  E++ ++
Sbjct: 94  PDVPLANRLVRDLCRRG---RPADAARVVEACGPEATAATYGALVDGYCRAGLLEDARRV 150

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           +  M        +   +N L+ A C    + +A  V+  M   G  PDVVTYN +  A  
Sbjct: 151 VGGMPAHVQAS-SAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAAC 209

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +     QA E+I  M   G +PN  T  +II   C+EG + +A     ++   G  PN V
Sbjct: 210 KGRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTV 269

Query: 320 IFNLLIKGFV---------EIMD----------------------RDGVDEVLAL----M 344
            +N ++KGF          EI+D                      R G+ + + L    M
Sbjct: 270 NYNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKM 329

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            +     +V+TY+ +++     G +D   E+  +M   G KPD   Y+ + KG       
Sbjct: 330 SKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRW 389

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           E AEEL++ M ++   P+   F TIIS WC  G + +A EVF +M E G +PN  T+ T+
Sbjct: 390 EDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTI 449

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           + G ++A +  +A E+L  M   G +  K  + +L E+       +E  +++ K+++
Sbjct: 450 IGGLTKAGKMEQALELLNEMANKGFNTDK-MYRVLTESLNKEDKIEEVVQVVHKLQD 505



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 135/261 (51%), Gaps = 5/261 (1%)

Query: 64  MNKESCRT-VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+K  C   V +   +++ + E+G    A  + +N+   G KP +VTY T+L  L    R
Sbjct: 329 MSKHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADR 388

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +     +M ++ +N   PD+  FN +I+ + + G + +A + F +M E G  P ++TY+T
Sbjct: 389 WEDAEELMIKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYST 448

Query: 183 LIKGYGIAGKPEESVKLLDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           +I G   AGK E++++LL+ M+ +G N     + Y VL  +   E  I E   V+HK+  
Sbjct: 449 IIGGLTKAGKMEQALELLNEMANKGFNTD---KMYRVLTESLNKEDKIEEVVQVVHKLQD 505

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
           SG+ P  V YNT+     +NG+ D A +V+ +M   G  P+  T  I+I G   EG  KE
Sbjct: 506 SGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKE 565

Query: 302 ALRFARTMKEYGVHPNLVIFN 322
           A      +    V  N +I N
Sbjct: 566 ARELLSRLCSRDVLSNSLIKN 586



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 142/314 (45%), Gaps = 3/314 (0%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P++   N LVR  C      +A  V+    A G +    TY  +   Y + G  + A  V
Sbjct: 94  PDVPLANRLVRDLCRRGRPADAARVVE---ACGPEATAATYGALVDGYCRAGLLEDARRV 150

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +  M  +    +      +I   C+ G++ +AL     M   G  P++V +N+L++   +
Sbjct: 151 VGGMPAHVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACK 210

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
                   E++  M+     P+ +TY+ I++A    G +D+ +E+ + +   G KP+   
Sbjct: 211 GRGYRQALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVN 270

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ + KG+   +    A+E+L  M+     PN      II+  C  G + +     +KM 
Sbjct: 271 YNTVLKGFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMS 330

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           +HG + N+ T+  ++ G  E      A E+L  M++FG  P   T+  + +   +    +
Sbjct: 331 KHGCTANVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWE 390

Query: 511 EAKRILSKIKNKER 524
           +A+ ++ K+   +R
Sbjct: 391 DAEELMIKMSQNDR 404


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 216/427 (50%), Gaps = 10/427 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+NS+ + GK  EA+++FNN+   G  P+ VTY+ L+ +   + + +     + ++ E G
Sbjct: 361 LINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG 420

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +      ++++I+   + G +  A   F +M  +GL P    Y +LI GY   G+   + 
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAF 480

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L   M+ +G + PN  T+  L+   C+   + EA  +  +M    + P+ VTYN +   
Sbjct: 481 RLYHEMTGKG-ISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEG 539

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY----- 312
           + + G   +A E++ EM   G+ P+  T   +ISG C  G++ EA  F   ++       
Sbjct: 540 HCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLN 599

Query: 313 ---GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G  PN+V +  LI G  +I   D  + +   M      P+  TY+  ++  ++ G +
Sbjct: 600 EIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNI 659

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +K  ++ D + + G   +   Y+IL +G+ +    ++A E+L+ MI+SG  P+ + ++TI
Sbjct: 660 EKAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTI 718

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I  +C  G +  AI++++ M   GV+P+   +  L++G     +  +A E+   M   GV
Sbjct: 719 IYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGV 778

Query: 490 HPQKSTF 496
            P ++T+
Sbjct: 779 KPNRATY 785



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 213/454 (46%), Gaps = 2/454 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ + ++  +  +   +   +++ G  P + T + +L  L   ++F     +  ++  +G
Sbjct: 151 LIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSG 210

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   + AV+ +  E  +   A +   +M+ SG   + +TYN  I+G     +  E+V
Sbjct: 211 LRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAV 270

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++ +L+S +G ++ ++ TY  LV   C  +       +M++M   G  P     + +   
Sbjct: 271 EIKNLLSYKG-LRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDG 329

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G    A +++ +++  GV P+      +I+  CK+GK+ EA      M   G+ PN
Sbjct: 330 LRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPN 389

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +++LI  F +    D     L  M E  +   V  YS++++     G +   K +FD
Sbjct: 390 DVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFD 449

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G+KP+   Y+ L  GY +E E   A  L   M   G  PN   FT +ISG C   
Sbjct: 450 EMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHAN 509

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M  A ++F +M E  V PN  T+  L+ G+ +     RA E+L  M   G+ P   T+ 
Sbjct: 510 RMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYR 569

Query: 498 LLAEARRATGLTKEAKRILSKIKN-KERTNEMEA 530
            L     +TG   EA+  ++ ++  +++ NE+E 
Sbjct: 570 PLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEG 603



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 210/449 (46%), Gaps = 17/449 (3%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +++ L++ L ++G    A  + N + + G  PSL  Y  L+ ++    + +   S+ + +
Sbjct: 322 AVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNM 381

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+ P+ + ++ +I++F + G ++ A+    KM E G+  T   Y++LI G+   GK 
Sbjct: 382 GHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKL 441

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +  L D M   G +KPN+  Y  L+  +C E  +  A+ + H+M   G+ P+  T+  
Sbjct: 442 RAAKSLFDEMIANG-LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTA 500

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           + +         +A ++  EM    V PN  T  ++I G+CKEG    A      M E G
Sbjct: 501 LISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKG 560

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF-----RVN------PDVITYSTIMNA 362
           + P+   +  LI G   +     V E    M +      ++N      P+V+TY+ ++N 
Sbjct: 561 LVPDTYTYRPLISG---LCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALING 617

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G MDK + +  +M  +   P+ + Y+        E   EKA +L   ++E GF  N
Sbjct: 618 LCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE-GFLAN 676

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            V +  +I G+C  G +  A EV   M + G+SP+  ++ T+++ Y        A ++ +
Sbjct: 677 TVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWE 736

Query: 483 IMKAFGVHPQKSTFLLLAEARRATG-LTK 510
            M   GV+P    +  L      TG LTK
Sbjct: 737 SMLNRGVNPDTVAYNFLIYGCCVTGELTK 765



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/403 (26%), Positives = 195/403 (48%), Gaps = 20/403 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++S  +RGK   A      + E G K ++  Y++L++      +  +  S+  ++  NG
Sbjct: 396 LIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANG 455

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ + + ++I+ + + G +  A   + +M   G++P T T+  LI G   A +  E+ 
Sbjct: 456 LKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEAN 515

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL   M  E NV PN  TYNVL+   C E N   A+ ++ +M   G+ PD  TY  + + 
Sbjct: 516 KLFGEMV-EWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISG 574

Query: 258 YAQNGEADQAEEVIVEM--------EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
               G   +A E + ++        E  G  PN  T   +I+G CK G + +A    R M
Sbjct: 575 LCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREM 634

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVL----ALMKEFRVNPDVITYSTIMNAWS 364
                 PN   +      F++ +  +G +++ +     L++ F  N   +TY+ ++  + 
Sbjct: 635 LASNSLPNQNTY----ACFLDYLTSEGNIEKAIQLHDVLLEGFLAN--TVTYNILIRGFC 688

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G + +  E+  +M  +GI PD  +YS +   Y R  + ++A +L  +M+  G +P+ V
Sbjct: 689 KLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTV 748

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            +  +I G C  G + +A E+ D M   GV PN  T+ +L+ G
Sbjct: 749 AYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHG 791



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 211/442 (47%), Gaps = 10/442 (2%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           +  + + N +IE G  PS    + L+  L  +    S   ++++V++ G+ P    +NA+
Sbjct: 302 EAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNAL 361

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           IN+  + G ++EA   F  M   GL P   TY+ LI  +   GK + ++  L  M+  G 
Sbjct: 362 INSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVG- 420

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           +K  +  Y+ L+   C    +  A ++  +M A+G+KP+VV Y ++ + Y + GE   A 
Sbjct: 421 IKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAF 480

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            +  EM   G+ PN  T   +ISG C   ++ EA +    M E+ V PN V +N+LI+G 
Sbjct: 481 RLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGH 540

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA------ 382
            +  +     E+L  M E  + PD  TY  +++   + G + + +E  +D+         
Sbjct: 541 CKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNE 600

Query: 383 --GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             G  P+   Y+ L  G  +    +KAE L   M+ S   PN   +   +    S+G+++
Sbjct: 601 IEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIE 660

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
           +AI++ D + E G   N  T+  L+ G+ +  +   A E+L  M   G+ P   ++  + 
Sbjct: 661 KAIQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTII 719

Query: 501 EARRATGLTKEAKRILSKIKNK 522
                 G  KEA ++   + N+
Sbjct: 720 YEYCRRGDLKEAIKLWESMLNR 741



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 188/384 (48%), Gaps = 10/384 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV   + L++   + GK + A+++F+ +I  G KP++V YT+L++    +   ++   + 
Sbjct: 424 TVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLY 483

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+ P++  F A+I+    +  M EA   F +M E  + P   TYN LI+G+   
Sbjct: 484 HEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKE 543

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-------- 242
           G    + +LLD M  +G V P+  TY  L+   C+   ++EA   M+ +           
Sbjct: 544 GNTVRAFELLDEMVEKGLV-PDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIE 602

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P+VVTY  +     + G  D+AE +  EM  +   PN  T    +     EG I++A
Sbjct: 603 GCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKA 662

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           ++    + E G   N V +N+LI+GF ++       EVL  M +  ++PD I+YSTI+  
Sbjct: 663 IQLHDVLLE-GFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYE 721

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +   G + +  ++++ M   G+ PD  AY+ L  G     E  KA EL   M+  G  PN
Sbjct: 722 YCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPN 781

Query: 423 VVIFTTIISGWCSDGSMDRAIEVF 446
              + ++I G C   S+    + F
Sbjct: 782 RATYNSLIHGTCLMSSVSSTADYF 805


>gi|224141281|ref|XP_002324003.1| predicted protein [Populus trichocarpa]
 gi|222867005|gb|EEF04136.1| predicted protein [Populus trichocarpa]
          Length = 626

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 213/425 (50%), Gaps = 36/425 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ + ++ G  +E    F  ++E G+ PS++    LL  L      +    +  ++   G
Sbjct: 188 LLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMGRVG 247

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+S  FN + + F + G++++  D   KM+E G  P   TYNTLI GY   G+  ++ 
Sbjct: 248 VIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAF 307

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L  +M R   V P+L +Y  L+   C E  + EA  ++H+M   G+ PDVV+YNT+   
Sbjct: 308 YLYRIMYRRC-VLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICG 366

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G+  +++ ++ EM  NG+ P+  TC ++I GY KEG +  AL     ++++GV  +
Sbjct: 367 YCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSIS 426

Query: 318 LVIFNLLI---------------------KGF---VEIMDR--------DGVDEVLALMK 345
             I++ L+                     +G+   VEI ++        D V + L+L  
Sbjct: 427 PDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALSLKA 486

Query: 346 EF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
           E     +NP+++TY  ++      G   + +++ ++M   G++PD      +  GY RE+
Sbjct: 487 EIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCREK 546

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           +  KAE LL+   +     +   ++T++   C DG + + +E+ ++M + G +PN  T +
Sbjct: 547 DAGKAESLLVLFAKEFQIFDSESYSTLVRIVCEDGDVAKFMELQERMLKVGFAPNSLTCK 606

Query: 463 TLMWG 467
            ++ G
Sbjct: 607 YMIDG 611



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 183/407 (44%), Gaps = 18/407 (4%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ----VEENGMDP-------------DSIF 144
           G KPS + Y  +L  L   K F      +++    V++   D              D I 
Sbjct: 125 GLKPSTLNYCLILHVLAWSKEFEQAMKFLTELILLVKDTDEDVFQCLFLCCQDCNWDPII 184

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           F+ ++ A+ ++G ++E   TF ++ E G  P+    N L+ G   +        +   M 
Sbjct: 185 FDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLCWHVYGEMG 244

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G V PN  T+N+L   +C + +I +  + + KM   G +PD+VTYNT+   Y   G  
Sbjct: 245 RVG-VIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRL 303

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
             A  +   M    V P+  +   +++G CKEG+++EA +    M   G++P++V +N L
Sbjct: 304 SDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTL 363

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G+ +         +L  M    + PD  T   ++  +   G++     +  ++ K G+
Sbjct: 364 ICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGV 423

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
                 Y  L      E  P  A+ LL  M + G+ P+V I+  +I   C    +  A+ 
Sbjct: 424 SISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIESLCKGDCVADALS 483

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           +  ++    ++PNL T++ L+       +   AE++++ M  FG+ P
Sbjct: 484 LKAEIVVGNINPNLLTYKALIRCLCRMGRSIEAEKLMEEMLHFGLQP 530



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/355 (23%), Positives = 158/355 (44%), Gaps = 20/355 (5%)

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD------------------LMSREG 207
           W   + GL P+T  Y  ++     + + E+++K L                   L  ++ 
Sbjct: 119 WVKNDLGLKPSTLNYCLILHVLAWSKEFEQAMKFLTELILLVKDTDEDVFQCLFLCCQDC 178

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
           N  P +  +++L++A+     I E +    ++   G  P V+  N +     ++      
Sbjct: 179 NWDPII--FDLLLKAYVKAGMIKEGFRTFMQILEVGYVPSVIACNYLLNGLLKSNHIHLC 236

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
             V  EM   GV PN  T  I+   +CK+G I +   F   M+E G  P++V +N LI G
Sbjct: 237 WHVYGEMGRVGVIPNSYTFNILTHLFCKDGDIDKMNDFLEKMEEEGFEPDIVTYNTLING 296

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           +           +  +M    V PD+++Y+ +MN     G + +  ++   M   G+ PD
Sbjct: 297 YCGRGRLSDAFYLYRIMYRRCVLPDLVSYTALMNGLCKEGRVREAHQLLHRMVHRGLNPD 356

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
             +Y+ L  GY +E +  +++ LL  MI +G  P+      +I G+  +G +  A+ +  
Sbjct: 357 VVSYNTLICGYCKEGKMLESKSLLYEMIGNGIFPDSFTCRVLIQGYRKEGWLISALNLVV 416

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           ++ + GVS +   ++ L+    E  +P+ A+ +L+ M   G  P    +  L E+
Sbjct: 417 ELEKFGVSISPDIYDYLVASLCEEDRPFAAKTLLERMSQRGYIPHVEIYNKLIES 471



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 74/315 (23%), Positives = 150/315 (47%), Gaps = 36/315 (11%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T LMN L + G+ +EA  + + ++  G  P +V+Y TL+     + +     S++ ++
Sbjct: 324 SYTALMNGLCKEGRVREAHQLLHRMVHRGLNPDVVSYNTLICGYCKEGKMLESKSLLYEM 383

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             NG+ PDS     +I  + + G +  A++   ++++ G++ +   Y+ L+       +P
Sbjct: 384 IGNGIFPDSFTCRVLIQGYRKEGWLISALNLVVELEKFGVSISPDIYDYLVASLCEEDRP 443

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +  LL+ MS+ G + P++  YN L+ + C    + +A ++  ++    + P+++TY  
Sbjct: 444 FAAKTLLERMSQRGYI-PHVEIYNKLIESLCKGDCVADALSLKAEIVVGNINPNLLTYKA 502

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G + +AE+++ EM H G+QP+   C  +I GYC+E             K+ G
Sbjct: 503 LIRCLCRMGRSIEAEKLMEEMLHFGLQPDPEICRAMIHGYCRE-------------KDAG 549

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              +L++                        KEF++  D  +YST++      G + K  
Sbjct: 550 KAESLLVL---------------------FAKEFQIF-DSESYSTLVRIVCEDGDVAKFM 587

Query: 374 EIFDDMGKAGIKPDA 388
           E+ + M K G  P++
Sbjct: 588 ELQERMLKVGFAPNS 602



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/205 (21%), Positives = 90/205 (43%), Gaps = 37/205 (18%)

Query: 319 VIFNLLIKGFVEI-MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +IF+LL+K +V+  M ++G    + ++ E    P VI  + ++N    +  +  C  ++ 
Sbjct: 183 IIFDLLLKAYVKAGMIKEGFRTFMQIL-EVGYVPSVIACNYLLNGLLKSNHIHLCWHVYG 241

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +MG+ G+ P+++ ++IL   +                                   C DG
Sbjct: 242 EMGRVGVIPNSYTFNILTHLF-----------------------------------CKDG 266

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D+  +  +KM E G  P++ T+ TL+ GY    +   A  + +IM    V P   ++ 
Sbjct: 267 DIDKMNDFLEKMEEEGFEPDIVTYNTLINGYCGRGRLSDAFYLYRIMYRRCVLPDLVSYT 326

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L       G  +EA ++L ++ ++
Sbjct: 327 ALMNGLCKEGRVREAHQLLHRMVHR 351


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 204/416 (49%), Gaps = 26/416 (6%)

Query: 91  AQAIFNNLIEGG---HKPSLVTYTTLLAAL-TIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           A+  +N ++E G   +K ++  +T  L  +   +K +N I  +MS+    G  PDS  ++
Sbjct: 71  AERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSK----GFIPDSSTYS 126

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            VI     +  +E+A   F +MK +G+TP   TY TL+  +   G  E++    D M ++
Sbjct: 127 KVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQD 186

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G   PN+ TY  L+ A+   + ++ A  +   M ++G  P++VTY  +   + + GE ++
Sbjct: 187 G-CAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEK 245

Query: 267 AEEVIVEMEHNGV-----------------QPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           A ++   M+++ V                 +PN  T G ++ G CK  K+KEA     TM
Sbjct: 246 ACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETM 305

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G  PN +I++ LI GF ++   D   EV   M     +P+V TYS++++       +
Sbjct: 306 SLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRL 365

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D   ++   M +    P+   Y+ +  G  +  + ++A  L++ M E G +PNVV +T +
Sbjct: 366 DLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAM 425

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           I G+   G +DR +E+   M   G +PN  T+  L+     A     A ++L+ MK
Sbjct: 426 IDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMK 481



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 218/465 (46%), Gaps = 21/465 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++   + G  ++A+  F+ + + G  P++VTYT L+ A    ++ +  + I  
Sbjct: 157 VYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFE 216

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEA----------------MDTFWKMKESGLT- 174
            +  NG  P+ + + A+I+   ++G  E+A                +D ++++ +S L  
Sbjct: 217 MMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKE 276

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P   TY  L+ G   A K +E+  LL+ MS EG  +PN   Y+ L+  +C    + EA  
Sbjct: 277 PNVVTYGALVDGLCKAHKVKEARDLLETMSLEG-CEPNQIIYDALIDGFCKVGKLDEAQE 335

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           V  KM   G  P+V TY+++     ++   D A +V+ +M  N   PN      ++ G C
Sbjct: 336 VFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLC 395

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           K GK  EA R    M+E G +PN+V +  +I GF +    D   E+L LM      P+ I
Sbjct: 396 KVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFI 455

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           TY  ++N    AG +D   ++ ++M +         Y  + +G+    E   +  LL  +
Sbjct: 456 TYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAEL 513

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
            E G  P + ++  +I  +   G ++ A+E+ +++     +    T+ +L+   + A + 
Sbjct: 514 SEDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQ-NTYVSLIESLTLACKV 572

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            +A ++   M   G  P+ S  + L +     G  +EA ++   I
Sbjct: 573 DKAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSI 617



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 217/485 (44%), Gaps = 62/485 (12%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI-MSQVEEN 136
           L+++    G    A  +   ++  G++P  V Y  L+  +   +   S+  I +++   N
Sbjct: 17  LVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSMEVIGLAERAYN 76

Query: 137 GMDPDSIFFNAV-INAFSES----GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            M    +  N V +  F+      G  E+A +   +M   G  P +STY+ +I     A 
Sbjct: 77  EMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNAS 136

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K E++ +L   M R G + P++ TY  L+  +C    I +A N   +M   G  P+VVTY
Sbjct: 137 KVEKAFQLFQEMKRNG-ITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTY 195

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +  AY +  +  +A E+   M  NG  PN  T   +I G+CK G+ ++A +    MK 
Sbjct: 196 TALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKN 255

Query: 312 YGVH-PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA---- 366
             V  P++ I+         I+D +        +KE    P+V+TY  +++    A    
Sbjct: 256 DKVDIPDVDIY-------FRIVDSE--------LKE----PNVVTYGALVDGLCKAHKVK 296

Query: 367 -------------------------------GFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
                                          G +D+ +E+F  M   G  P+ + YS L 
Sbjct: 297 EARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLI 356

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
               +++  + A ++L  M+E+   PNVVI+T ++ G C  G  D A  +   M E G  
Sbjct: 357 DKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCY 416

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           PN+ T+  ++ G+ +A +  R  E+LQ+M + G  P   T+ +L     A GL  +A ++
Sbjct: 417 PNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKL 476

Query: 516 LSKIK 520
           L ++K
Sbjct: 477 LEEMK 481



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 107/471 (22%), Positives = 225/471 (47%), Gaps = 19/471 (4%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + +K++  L    K ++A  +F  +   G  P + TYTTLL             +   ++
Sbjct: 124 TYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEM 183

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +++G  P+ + + A+I+A+ ++  +  A + F  M  +G  P   TY  LI G+  AG+ 
Sbjct: 184 QQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGET 243

Query: 194 EESVKL-------------LDLMSR--EGNVK-PNLRTYNVLVRAWCNEKNITEAWNVMH 237
           E++ ++             +D+  R  +  +K PN+ TY  LV   C    + EA +++ 
Sbjct: 244 EKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLE 303

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
            M+  G +P+ + Y+ +   + + G+ D+A+EV  +M  +G  PN  T   +I    K+ 
Sbjct: 304 TMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDK 363

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
           ++  AL+    M E    PN+VI+  ++ G  ++   D    ++ +M+E    P+V+TY+
Sbjct: 364 RLDLALKVLTKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYT 423

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++ +  AG +D+C E+   M   G  P+   Y +L          + A +LL  M ++
Sbjct: 424 AMIDGFGKAGRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEMKQT 483

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
            +  ++ ++  +I G+  +     ++ +  ++ E G  P L  ++ L+  + +A +   A
Sbjct: 484 YWPKHIGMYRKVIEGFSHE--FVASLGLLAELSEDGSVPILPVYKLLIDNFIKAGRLEMA 541

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEM 528
            E+ + + +F    Q +T++ L E+        +A ++ S +  +    E+
Sbjct: 542 LELHEELSSFSAAYQ-NTYVSLIESLTLACKVDKAFKLYSDMTRRGFVPEL 591



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/350 (24%), Positives = 153/350 (43%), Gaps = 35/350 (10%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           +P++VTY  L+  L    +      ++  +   G +P+ I ++A+I+ F + G ++EA +
Sbjct: 276 EPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQE 335

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
            F KM   G +P   TY++LI       + + ++K+L  M  E +  PN+  Y  +V   
Sbjct: 336 VFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKM-LENSCAPNVVIYTEMVDGL 394

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C      EA+ +M  M   G  P+VVTY  +   + + G  D+  E++  M   G  PN 
Sbjct: 395 CKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNF 454

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMK--------------------------------- 310
            T  ++I+  C  G + +A +    MK                                 
Sbjct: 455 ITYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELS 514

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G  P L ++ LLI  F++    +   E+   +  F       TY +++ + + A  +D
Sbjct: 515 EDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQN-TYVSLIESLTLACKVD 573

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           K  +++ DM + G  P+      L KG +R  + E+A +L  ++ +   H
Sbjct: 574 KAFKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQLSDSICQMDIH 623



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 139/315 (44%), Gaps = 30/315 (9%)

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G  P+      ++  YC+ G    A +  + M   G  P  V++N+LI G     D   +
Sbjct: 6   GCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTEDLPSM 65

Query: 338 DEVLAL-------MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
            EV+ L       M E  V  + +            G  +K   +  +M   G  PD+  
Sbjct: 66  -EVIGLAERAYNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGFIPDSST 124

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YS +        + EKA +L   M  +G  P+V  +TT++  +C  G +++A   FD+M 
Sbjct: 125 YSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQ 184

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           + G +PN+ T+  L+  Y + R+  RA EI ++M + G  P   T+  L +     G T+
Sbjct: 185 QDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHCKAGETE 244

Query: 511 EAKRILSKIKNKERTNEMEAEEDIP-VESLERLYHKEATTASYPNLLQIPNVVS----SD 565
           +A +I +++KN +         DIP V+   R+   E         L+ PNVV+     D
Sbjct: 245 KACQIYARMKNDKV--------DIPDVDIYFRIVDSE---------LKEPNVVTYGALVD 287

Query: 566 QKGSAAALKKGRMLL 580
               A  +K+ R LL
Sbjct: 288 GLCKAHKVKEARDLL 302


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 200/398 (50%), Gaps = 4/398 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++N L + GK ++A+     +   G KP++VTY TL+   +++ R      I+S
Sbjct: 225 VYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIIS 284

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++  G  PD   +N +++     G   E +    +MKE GL P + +YN LI+G    G
Sbjct: 285 EMKSKGFQPDMQTYNPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNG 341

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E +    D M ++G V P   TYN L+     E  I  A  ++ ++   G+  D VTY
Sbjct: 342 DLEMAFAYRDEMVKQGMV-PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 400

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y Q+G+A +A  +  EM  +G+QP   T   +I   C++ K +EA      +  
Sbjct: 401 NILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVG 460

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P+LV+ N L+ G   I + D    +L  M    +NPD +TY+ +M      G  ++
Sbjct: 461 KGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEE 520

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +E+  +M + GIKPD  +Y+ L  GY ++ + + A  +   M+  GF+P ++ +  ++ 
Sbjct: 521 ARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLK 580

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           G   +   + A E+  +M   G+ PN  +F +++   S
Sbjct: 581 GLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMS 618



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/436 (25%), Positives = 201/436 (46%), Gaps = 10/436 (2%)

Query: 67  ESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           E+C  + ++   +N +      + A   + ++     K ++ T+  ++  L  + +    
Sbjct: 191 ETCNHILTLLSRLNRI------ENAWVFYADMYRMEIKSNVYTFNIMINVLCKEGKLKKA 244

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
              +  +E  G+ P  + +N ++  FS  G +E A     +MK  G  P   TYN ++  
Sbjct: 245 KGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTYNPILSW 304

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
               G+  E ++ +    +E  + P+  +YN+L+R   N  ++  A+    +M   GM P
Sbjct: 305 MCNEGRASEVLREM----KEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVKQGMVP 360

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
              TYNT+        + + AE +I E+   G+  +  T  I+I+GYC+ G  K+A    
Sbjct: 361 TFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKKAFALH 420

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             M   G+ P    +  LI            DE+   +    + PD++  +T+M+     
Sbjct: 421 DEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCAI 480

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G MD+   +  +M    I PD   Y+ L +G   E + E+A EL+  M   G  P+ + +
Sbjct: 481 GNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISY 540

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            T+ISG+   G    A  V D+M   G +P L T+  L+ G S+ ++   AEE+L+ MK+
Sbjct: 541 NTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGLSKNQEGELAEELLREMKS 600

Query: 487 FGVHPQKSTFLLLAEA 502
            G+ P  S+F  + EA
Sbjct: 601 EGIVPNDSSFCSVIEA 616



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 205/441 (46%), Gaps = 44/441 (9%)

Query: 111 TTLLAALTIQKRFNSIHSIMSQV---EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
            T L    +  R NSI ++  ++    +      +I F+ ++    +   ++EA++ F+ 
Sbjct: 121 VTQLLKEVVTSRKNSIRNLFDELVLAHDRLETKSTILFDLLVRCCCQLRMVDEAIECFYL 180

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEES-VKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
           MKE G  P T T N ++       + E + V   D+   E  +K N+ T+N+++   C E
Sbjct: 181 MKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRME--IKSNVYTFNIMINVLCKE 238

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
             + +A   +  M   G+KP +VTYNT+   ++  G  + A  +I EM+  G QP+ +T 
Sbjct: 239 GKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKGFQPDMQTY 298

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG------------FVEIMDR 334
             I+S  C EG+  E LR    MKE G+ P+ V +N+LI+G            + + M +
Sbjct: 299 NPILSWMCNEGRASEVLR---EMKEIGLVPDSVSYNILIRGCSNNGDLEMAFAYRDEMVK 355

Query: 335 DG--------------------VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDK 371
            G                    ++    L++E R   +  D +TY+ ++N +   G   K
Sbjct: 356 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYCQHGDAKK 415

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + D+M   GI+P    Y+ L     R+ +  +A+EL   ++  G  P++V+  T++ 
Sbjct: 416 AFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKPDLVMMNTLMD 475

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C+ G+MDRA  +  +M    ++P+  T+  LM G     +   A E++  MK  G+ P
Sbjct: 476 GHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 535

Query: 492 QKSTFLLLAEARRATGLTKEA 512
              ++  L       G TK A
Sbjct: 536 DHISYNTLISGYSKKGDTKHA 556



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 211/452 (46%), Gaps = 19/452 (4%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           EA   F  + E G  P   T   +L  L+   R  +     + +    +  +   FN +I
Sbjct: 173 EAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 232

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N   + G +++A      M+  G+ PT  TYNTL++G+ + G+ E +  ++  M  +G  
Sbjct: 233 NVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISEMKSKG-F 291

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +P+++TYN ++   CNE   +E   V+ +M   G+ PD V+YN +    + NG+ + A  
Sbjct: 292 QPDMQTYNPILSWMCNEGRASE---VLREMKEIGLVPDSVSYNILIRGCSNNGDLEMAFA 348

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
              EM   G+ P   T   +I G   E KI+ A    R ++E G+  + V +N+LI G+ 
Sbjct: 349 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNILINGYC 408

Query: 330 EIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           +  D     +  AL  E     + P   TY++++          +  E+F+ +   G+KP
Sbjct: 409 QHGD---AKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKGMKP 465

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D    + L  G+      ++A  LL  M     +P+ V +  ++ G C +G  + A E+ 
Sbjct: 466 DLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEARELM 525

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            +M   G+ P+  ++ TL+ GYS+      A  +   M + G +P   T+  L +     
Sbjct: 526 GEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLK----- 580

Query: 507 GLTKEAKRILSKIKNKERTNEMEAEEDIPVES 538
           GL+K  +  L+    +E   EM++E  +P +S
Sbjct: 581 GLSKNQEGELA----EELLREMKSEGIVPNDS 608



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/336 (25%), Positives = 146/336 (43%), Gaps = 32/336 (9%)

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           +++LVR  C  + + EA    + M   G  P   T N I T  ++    + A     +M 
Sbjct: 158 FDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMY 217

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF------- 328
              ++ N  T  I+I+  CKEGK+K+A  F   M+ +G+ P +V +N L++GF       
Sbjct: 218 RMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIE 277

Query: 329 -----VEIMDRDG--------------------VDEVLALMKEFRVNPDVITYSTIMNAW 363
                +  M   G                      EVL  MKE  + PD ++Y+ ++   
Sbjct: 278 GARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSVSYNILIRGC 337

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
           S  G ++      D+M K G+ P  + Y+ L  G   E + E AE L+  + E G   + 
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           V +  +I+G+C  G   +A  + D+M   G+ P   T+ +L++      +   A+E+ + 
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457

Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +   G+ P       L +   A G    A  +L ++
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEM 493


>gi|224130398|ref|XP_002320827.1| predicted protein [Populus trichocarpa]
 gi|222861600|gb|EEE99142.1| predicted protein [Populus trichocarpa]
          Length = 775

 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 122/450 (27%), Positives = 212/450 (47%), Gaps = 11/450 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI---MSQVE 134
           L+  L   G       +   ++E   +P++VT+  L+  +   +R +    +   MS  +
Sbjct: 311 LLTGLAREGNFNRMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGK 370

Query: 135 ENG-----MDPDSIFFNAVINAFSESGNMEEAMDTFWKMK-ESGLTPTTSTYNTLIKGYG 188
           E+G     ++PD + +N +I+   + G  +E +    +M+ + G  P T TYN LI G+ 
Sbjct: 371 ESGGISVSVEPDVVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFC 430

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            AG+ E+  +L D M++EG V PN+ T N LV   C    ++ A N   +    GMK D 
Sbjct: 431 KAGEIEKGKELFDEMNKEG-VAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDA 489

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTY  +  A+      ++A E+  EM  +G  P+      +ISG+ + G++ +A      
Sbjct: 490 VTYTALINAFCNVNNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAE 549

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           +K+ G+ P+ V +N LI GF        V E+L  M+E  + PD ITY+T++   S  G 
Sbjct: 550 LKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGD 609

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM-IESGFHPNVVIFT 427
           +   +++   M KAG+ P    Y  +   Y       +A E+   M   S   PN VI+ 
Sbjct: 610 LKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYN 669

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +I+  C +  +  A+ + + M   GV+PN  T+  +  G  + +   +  E +  M   
Sbjct: 670 ILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEH 729

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILS 517
             +P   T  +L E   A G  +  K+ ++
Sbjct: 730 ACNPDYITMEILTEWLSAVGEIERLKKFVA 759



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/481 (24%), Positives = 218/481 (45%), Gaps = 31/481 (6%)

Query: 47  SNSKPTDSQPQTHCSFCMNKESCRTVRS----------------------MTKLMNSLIE 84
           SN +P D+      SF + +E    + S                      M +L+  L  
Sbjct: 223 SNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFGEHGVLISSFWMGRLITRLCR 282

Query: 85  RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
             K      +F  +I+ G         +LL  L  +  FN ++ +M ++ E  + P+ + 
Sbjct: 283 NRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMDIQPNVVT 342

Query: 145 FNAVINAFSESGNMEEAMDTFWKM---KESG-----LTPTTSTYNTLIKGYGIAGKPEES 196
           F  +IN   +   +++A++   KM   KESG     + P    YNTLI G    G+ +E 
Sbjct: 343 FGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCKVGRQQEG 402

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + L++ M  +    P+  TYN L+  +C    I +   +  +M   G+ P+VVT NT+  
Sbjct: 403 LGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAPNVVTVNTLVG 462

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              + G    A    VE +  G++ +  T   +I+ +C     ++A+     M + G  P
Sbjct: 463 GMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELFNEMLKSGCSP 522

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           + +++  LI GF +         VLA +K+  + PD + Y+T++  +       +  E+ 
Sbjct: 523 DAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEML 582

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M +AG+KPD   Y+ L     +  + + A++++  MI++G  P V  +  +I+ +C +
Sbjct: 583 KEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLN 642

Query: 437 GSMDRAIEVFDKM-CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           G+ + A+E+F  M     V PN   +  L+    +  +   A  +++ MK +GV P  +T
Sbjct: 643 GNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWGVTPNTTT 702

Query: 496 F 496
           +
Sbjct: 703 Y 703



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/314 (30%), Positives = 152/314 (48%), Gaps = 3/314 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           MNKE     V ++  L+  +   G+   A   F      G K   VTYT L+ A      
Sbjct: 445 MNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNN 504

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F     + +++ ++G  PD+I +  +I+ FS++G M +A     ++K+ G+ P T  YNT
Sbjct: 505 FEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNT 564

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+    K     ++L  M   G +KP+  TYN L+       ++  A  VM KM  +
Sbjct: 565 LIGGFCRTNKFHRVFEMLKEMEEAG-LKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKA 623

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKE 301
           G+ P V TY  +  AY  NG  ++A E+  +M+  + V PN     I+I+  CK  K+K 
Sbjct: 624 GVVPTVATYGAVINAYCLNGNGNEAMEIFKDMKAASKVPPNTVIYNILINSLCKNNKVKS 683

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A+     MK +GV PN   +N + KG  +  D + V E +  M E   NPD IT   +  
Sbjct: 684 AVSLMEDMKIWGVTPNTTTYNAIFKGLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTE 743

Query: 362 AWSTAGFMDKCKEI 375
             S  G +++ K+ 
Sbjct: 744 WLSAVGEIERLKKF 757



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 159/348 (45%), Gaps = 50/348 (14%)

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L+   C  +     W++  +M   G   +    N++ T  A+ G  ++  E++ +M    
Sbjct: 276 LITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFNRMNELMEKMVEMD 335

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTM---KEYG-----VHPNLVIFNLLIKGFVE 330
           +QPN  T GI+I+  CK  ++ +AL     M   KE G     V P++VI+N LI G  +
Sbjct: 336 IQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPDVVIYNTLIDGLCK 395

Query: 331 IMDRDGVDEVLALMKEFRVN----PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           +  +    E L LM+  R      PD ITY+ +++ +  AG ++K KE+FD+M K G+ P
Sbjct: 396 VGRQQ---EGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELFDEMNKEGVAP 452

Query: 387 -----------------------------------DAHAYSILAKGYVREQEPEKAEELL 411
                                              DA  Y+ L   +      EKA EL 
Sbjct: 453 NVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNVNNFEKAMELF 512

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M++SG  P+ +++ T+ISG+   G M  A  V  ++ + G+ P+   + TL+ G+   
Sbjct: 513 NEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRT 572

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            +  R  E+L+ M+  G+ P   T+  L       G  K A++++ K+
Sbjct: 573 NKFHRVFEMLKEMEEAGLKPDTITYNTLIAYASKNGDLKFAQKVMRKM 620



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 149/349 (42%), Gaps = 18/349 (5%)

Query: 190 AGKPEESVKLLDLM---SREGNVKPNLRT----YNVLVRAWCNEKNITE--AWNVMHKMA 240
           +G+ ++++K++D M   + + N +PN  T    ++ L++   NE+ ++E    N++ K  
Sbjct: 203 SGRVKDALKVIDEMFESNDDSNCRPNDATGDILFSFLLKRERNEELLSEDEIVNLVLKFG 262

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
             G+         + T   +N + ++  ++  EM   G       C  +++G  +EG   
Sbjct: 263 EHGVLISSFWMGRLITRLCRNRKTNRGWDLFTEMIKLGAVLESAACNSLLTGLAREGNFN 322

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK--------EFRVNPD 352
                   M E  + PN+V F +LI    +    D   EVL  M            V PD
Sbjct: 323 RMNELMEKMVEMDIQPNVVTFGILINHMCKFRRVDDALEVLEKMSGGKESGGISVSVEPD 382

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDM-GKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           V+ Y+T+++     G   +   + + M  + G  PD   Y+ L  G+ +  E EK +EL 
Sbjct: 383 VVIYNTLIDGLCKVGRQQEGLGLMERMRSQKGCAPDTITYNCLIDGFCKAGEIEKGKELF 442

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M + G  PNVV   T++ G C  G +  A+  F +    G+  +  T+  L+  +   
Sbjct: 443 DEMNKEGVAPNVVTVNTLVGGMCRTGRVSSAVNFFVEAQRRGMKGDAVTYTALINAFCNV 502

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
               +A E+   M   G  P    +  L       G   +A  +L+++K
Sbjct: 503 NNFEKAMELFNEMLKSGCSPDAIVYYTLISGFSQAGRMADASFVLAELK 551



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 102/234 (43%), Gaps = 37/234 (15%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   + G+  +A  +   L + G +P  V Y TL+       +F+ +  ++ ++EE G
Sbjct: 530 LISGFSQAGRMADASFVLAELKKLGIRPDTVCYNTLIGGFCRTNKFHRVFEMLKEMEEAG 589

Query: 138 MDPDSIFFN-----------------------------------AVINAFSESGNMEEAM 162
           + PD+I +N                                   AVINA+  +GN  EAM
Sbjct: 590 LKPDTITYNTLIAYASKNGDLKFAQKVMRKMIKAGVVPTVATYGAVINAYCLNGNGNEAM 649

Query: 163 DTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           + F  MK  S + P T  YN LI       K + +V L++ M   G V PN  TYN + +
Sbjct: 650 EIFKDMKAASKVPPNTVIYNILINSLCKNNKVKSAVSLMEDMKIWG-VTPNTTTYNAIFK 708

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
              +EK++ + +  M +M      PD +T   +    +  GE ++ ++ +   E
Sbjct: 709 GLRDEKDLEKVFEFMDRMIEHACNPDYITMEILTEWLSAVGEIERLKKFVAGCE 762


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 222/434 (51%), Gaps = 7/434 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +RS   ++N+ IE  + +EA+  F      G  P+L TY  L+     +++F     +++
Sbjct: 114 IRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLT 173

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + ENG++PD + +  +INA ++SGN+ +A++ F +M   G+ P    YN LI G+   G
Sbjct: 174 WMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKG 233

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              ++ ++   +  E +V P++ TYN+++   C    + E+  + ++M  +   PD+ T+
Sbjct: 234 DFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTF 293

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +++    ++ G  + AE+V  EM  +G+ P+ RT   ++SG  + GK+ +       M +
Sbjct: 294 SSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSK 353

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA---LMKEFRVNPDVITYSTIMNAWSTAGF 368
                N+V +N+LI+G   ++D   V++ +    L+ E  +  D  TY  ++N     G+
Sbjct: 354 NNC-CNIVSYNMLIQG---LLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGY 409

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           ++K   I ++    G   D  AYS +  G  ++   E+A EL+  M ++    N  +F +
Sbjct: 410 LNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNS 469

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I+G+     ++ AI V  +M     +P + ++ T++ G  +A +   A   L+ M   G
Sbjct: 470 LINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEG 529

Query: 489 VHPQKSTFLLLAEA 502
           + P   T+ LL + 
Sbjct: 530 LKPDMITYSLLIDG 543



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 207/423 (48%), Gaps = 9/423 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           L++  + +G   +A  I+  L+ E    PS+ TY  ++  L    + +    + +++++N
Sbjct: 225 LIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKN 284

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
              PD   F+++I+  S++GN   A   F +M ESGL+P   TYN ++ G    GK  + 
Sbjct: 285 EKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKC 344

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA---WNVMHKMAASGMKPDVVTYNT 253
            +L ++MS+  N   N+ +YN+L++   + K + +A   W ++H+    G+K D  TY  
Sbjct: 345 FELWNVMSK--NNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHE---RGLKADSTTYGL 399

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     +NG  ++A  ++ E E+ G   +      ++ G CK+G +++A+     MK+  
Sbjct: 400 LINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNR 459

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              N  +FN LI G+V     +    VL  MK     P V++Y+TI+N    A       
Sbjct: 460 RKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAY 519

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
               +M + G+KPD   YS+L  G  R ++ + A  L    I     P++ +   II G 
Sbjct: 520 LSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGL 579

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C+   +D A+E+F +M +    P+L T  T+M G  +A     A +I   +   G+ P  
Sbjct: 580 CTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDI 639

Query: 494 STF 496
            ++
Sbjct: 640 ISY 642



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 100/432 (23%), Positives = 199/432 (46%), Gaps = 2/432 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   ++N L + GK  E+  ++N + +    P L T+++++  L+    FN+   + 
Sbjct: 254 SVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVF 313

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ E+G+ PD   +NA+++    +G + +  +  W +          +YN LI+G    
Sbjct: 314 QEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFE-LWNVMSKNNCCNIVSYNMLIQGLLDN 372

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K E+++    L+   G +K +  TY +L+   C    + +A  ++ +    G   D   
Sbjct: 373 KKVEQAICYWQLLHERG-LKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFA 431

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+++     + G  +QA E+I +M+ N  + N      +I+GY +  K++EA+   R MK
Sbjct: 432 YSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMK 491

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                P +V +N +I G  +          L  M E  + PD+ITYS +++       +D
Sbjct: 492 SKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVD 551

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               ++       +KPD   ++I+  G    Q+ + A E+   M +    P++V   TI+
Sbjct: 552 MALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIM 611

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G    G    A++++D++ E G+ P++ ++     G     +   A E L      G+ 
Sbjct: 612 EGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGIL 671

Query: 491 PQKSTFLLLAEA 502
           P   T+ +L  A
Sbjct: 672 PNAPTWNVLVRA 683



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 104/457 (22%), Positives = 215/457 (47%), Gaps = 7/457 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIE--GGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           V S T ++  L     P  A AIF++  +  G   P  V +  +L  L   K    +  I
Sbjct: 7   VISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFV-FHHILRRLMDPKLVVHVGRI 65

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE-SGLTPTTSTYNTLIKGYG 188
           +  +             + I A+++    ++A++ F  M +  G  P   ++N+++  + 
Sbjct: 66  VDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAFI 125

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            + +  E+          G + PNL+TYN+L++  C ++   +   ++  M  +G+ PD+
Sbjct: 126 ESNQWREAELFFTYFQTAG-MSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDI 184

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR-FAR 307
           ++Y T+  A A++G    A E+  EM   GV P+     I+I G+ ++G   +A   + R
Sbjct: 185 LSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKR 244

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            + E  V+P++  +N++I G  ++   D   E+   MK+   +PD+ T+S++++  S AG
Sbjct: 245 LLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAG 304

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
             +  +++F +M ++G+ PD   Y+ +  G  R  +  K  EL   M ++    N+V + 
Sbjct: 305 NFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIVSYN 363

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +I G   +  +++AI  +  + E G+  +  T+  L+ G  +     +A  IL+  +  
Sbjct: 364 MLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENE 423

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
           G       +  +       G+ ++A  ++ ++K   R
Sbjct: 424 GADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRR 460



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 164/339 (48%), Gaps = 1/339 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M+K +C  + S   L+  L++  K ++A   +  L E G K    TY  L+  L      
Sbjct: 351 MSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYL 410

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           N    I+ + E  G D D+  ++++++   + G +E+A++   +MK++     +  +N+L
Sbjct: 411 NKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSL 470

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I GY  A K EE++ +L  M +  +  P + +YN ++   C  +  ++A+  + +M   G
Sbjct: 471 INGYVRAFKLEEAISVLREM-KSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEG 529

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           +KPD++TY+ +     +  + D A  +  +  +  ++P+ +   III G C   K+  AL
Sbjct: 530 LKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVAL 589

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M++    P+LV  N +++G  +  D     ++   + E  + PD+I+Y+      
Sbjct: 590 EIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGL 649

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            +   +    E   D    GI P+A  +++L +  V ++
Sbjct: 650 CSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDK 688



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 96/420 (22%), Positives = 193/420 (45%), Gaps = 3/420 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIM-SQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           P +++ T +L  L  +K  N+  +I  S  +  G       F+ ++    +   +     
Sbjct: 5   PKVISPTLVLKLLKAEKNPNAALAIFDSACQHPGYAHPPFVFHHILRRLMDPKLVVHVGR 64

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
               M+    T +     + IK Y     P++++ L   M       P +R++N ++ A+
Sbjct: 65  IVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVDIFGCNPGIRSFNSMLNAF 124

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
                  EA         +GM P++ TYN +     +  + ++ + ++  M  NG+ P+ 
Sbjct: 125 IESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTWMFENGLNPDI 184

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA- 342
            + G +I+   K G + +A+     M   GV+P+++ +N+LI GF+   D    +E+   
Sbjct: 185 LSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGDFVKANEIWKR 244

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
           L+ E  V P V TY+ ++N     G +D+  E+++ M K    PD   +S +  G  +  
Sbjct: 245 LLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAG 304

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
               AE++   MIESG  P+V  +  ++SG    G +++  E+++ M ++    N+ ++ 
Sbjct: 305 NFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNCC-NIVSYN 363

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            L+ G  + ++  +A    Q++   G+    +T+ LL       G   +A RIL + +N+
Sbjct: 364 MLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENE 423



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/365 (24%), Positives = 168/365 (46%), Gaps = 2/365 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           VR+   +++ L   GK  +   ++N ++   +  ++V+Y  L+  L   K+         
Sbjct: 325 VRTYNAMLSGLFRTGKLNKCFELWN-VMSKNNCCNIVSYNMLIQGLLDNKKVEQAICYWQ 383

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + E G+  DS  +  +IN   ++G + +A+    + +  G    T  Y++++ G    G
Sbjct: 384 LLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKG 443

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E++V+L+  M ++   K N   +N L+  +     + EA +V+ +M +    P VV+Y
Sbjct: 444 MLEQAVELIHQM-KKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSY 502

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NTI     +      A   + EM   G++P+  T  ++I G C+  K+  AL        
Sbjct: 503 NTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCIN 562

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             + P+L + N++I G       D   E+   M++    PD++T++TIM     AG   +
Sbjct: 563 KRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVE 622

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             +I+D + +AG++PD  +Y+I  KG         A E L   ++ G  PN   +  ++ 
Sbjct: 623 ALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVR 682

Query: 432 GWCSD 436
               D
Sbjct: 683 AVVDD 687



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/224 (20%), Positives = 105/224 (46%), Gaps = 1/224 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N  +   K +EA ++   +      P++V+Y T++  L   +RF+  +  + ++ E G
Sbjct: 470 LINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEG 529

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD I ++ +I+       ++ A++ + +     L P    +N +I G   A K + ++
Sbjct: 530 LKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVAL 589

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++   M R+ N  P+L T+N ++       +  EA  +  ++  +G++PD+++YN     
Sbjct: 590 EIFTQM-RQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKG 648

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
                    A E + +    G+ PN  T  +++     +  + E
Sbjct: 649 LCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLME 692



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 47/196 (23%), Positives = 104/196 (53%), Gaps = 5/196 (2%)

Query: 338 DEVLALMKE----FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
           D+ L L +     F  NP + ++++++NA+  +    + +  F     AG+ P+   Y+I
Sbjct: 95  DQALNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNI 154

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L K   ++++ EK + LL  M E+G +P+++ + T+I+     G++  A+E+FD+M   G
Sbjct: 155 LIKISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRG 214

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEIL-QIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           V+P++  +  L+ G+       +A EI  +++    V+P   T+ ++       G   E+
Sbjct: 215 VNPDVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDES 274

Query: 513 KRILSKIKNKERTNEM 528
             + +++K  E++ ++
Sbjct: 275 MEMWNRMKKNEKSPDL 290



 Score = 46.6 bits (109), Expect = 0.046,   Method: Compositional matrix adjust.
 Identities = 27/124 (21%), Positives = 52/124 (41%)

Query: 63  CMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           C+NK     ++    +++ L    K   A  IF  + +    P LVT+ T++  L     
Sbjct: 560 CINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGD 619

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 I  ++ E G+ PD I +N           + +A++  +   + G+ P   T+N 
Sbjct: 620 CVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNV 679

Query: 183 LIKG 186
           L++ 
Sbjct: 680 LVRA 683


>gi|449433161|ref|XP_004134366.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 917

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 208/434 (47%), Gaps = 2/434 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C   V S   ++N+   +G+   A  + N +IE G KPS+ T+ T++ A   +  
Sbjct: 314 MGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGN 373

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                    ++E+ G+  ++I +N +I+ + ++ ++ +A   F +M+   + P   T+NT
Sbjct: 374 VELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNT 433

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ G+   GK E+  +LL  +S  G +  +    +V V   C      EA  ++  +   
Sbjct: 434 LVAGHYRYGKEEDGNRLLRDLSVSGLLHDS-SLCDVTVAGLCWAGRYDEAMKLLENLLGK 492

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P VV +N+I  AY   G  ++A      M   G+ P+  TC  ++    ++G + EA
Sbjct: 493 GIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEA 552

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M + G     + F +L+ G+  I   +  + +   MK   V PD + ++  +N 
Sbjct: 553 WIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFING 612

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              +G M    ++F DM + G  P+   Y+ L  G+ +  +  +A +L+  M + G  P+
Sbjct: 613 LCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPD 672

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           +     II G C  G M  AIE F  MC  G+SP++ T+ TL+ GY +A     A++++ 
Sbjct: 673 IFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMM 732

Query: 483 IMKAFGVHPQKSTF 496
            M   G  P  +T+
Sbjct: 733 KMSDSGWEPDLTTY 746



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 212/458 (46%), Gaps = 9/458 (1%)

Query: 86  GKPQEAQAIFNNLIEGG--HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
           GK ++   +  +L   G  H  SL   T  +A L    R++    ++  +   G+ P  +
Sbjct: 442 GKEEDGNRLLRDLSVSGLLHDSSLCDVT--VAGLCWAGRYDEAMKLLENLLGKGIPPSVV 499

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES-VKLLDL 202
            FN++I A+  +G  E A   +  M + GLTP++ST ++L+      G  +E+ + L D+
Sbjct: 500 AFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDM 559

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           + + G    N+  + VL+  +     +  A ++ ++M   G+ PD V +         +G
Sbjct: 560 IDK-GFPVTNM-AFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISG 617

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
               A +V  +M   G  PN      +I G+CK GK+ EAL+  R M + G+ P++   N
Sbjct: 618 LMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVN 677

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           ++I G  +        E    M    ++PD++TY+T+++ +  A  +    ++   M  +
Sbjct: 678 MIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDS 737

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G +PD   Y+I   GY   ++  +A  +L  +I  G  PN V + T+I+  C +  +D A
Sbjct: 738 GWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVC-NVILDHA 796

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           + +  K+ +    PN  T   L+  + +   P +A    Q +    +   ++T  L+  A
Sbjct: 797 MILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHLDFDETTHKLMNRA 856

Query: 503 RRATGLTKEAKRILSKIKNKERTNEMEAEE-DIPVESL 539
            RA     E KR         R  + +A+E DIP  SL
Sbjct: 857 YRALEEGGEKKRKEGSAFEYSREQDHDAQERDIPFTSL 894



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 185/421 (43%), Gaps = 40/421 (9%)

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           + D    + ++ AF +S    EA++   KM+E G+TP  S  + L +    AG      K
Sbjct: 215 ESDYSVLDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWK 274

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNE--KNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           L   + R+G   PN  T+N+L+  +C +    I EA  ++H M     +PDV +YN +  
Sbjct: 275 LFGDVVRKGPC-PNNFTFNLLILEFCRKGWTRIGEA--LLHVMGKFRCEPDVYSYNIVIN 331

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A    G++  A  ++  M  NG +P+  T   II  +CKEG ++ A ++   +++ G+  
Sbjct: 332 ANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQ 391

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N +++N++I G+V+  D    + +   M+   + PD IT++T++      G  +    + 
Sbjct: 392 NTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLL 451

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            D+  +G+  D+    +   G       ++A +LL  ++  G  P+VV F +II+ + + 
Sbjct: 452 RDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNA 511

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKT-----------------------------------F 461
           G  +RA   +  M + G++P+  T                                   F
Sbjct: 512 GLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAF 571

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             L+ GY        AE +   MK  GV P    F         +GL  +A  + S +  
Sbjct: 572 TVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLR 631

Query: 522 K 522
           K
Sbjct: 632 K 632



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 103/478 (21%), Positives = 195/478 (40%), Gaps = 41/478 (8%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           +  LM + ++     EA  I + + E G  P+    + L   L       ++  +   V 
Sbjct: 221 LDTLMRAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVV 280

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G  P++  FN +I  F   G           M +    P   +YN +I    + G+  
Sbjct: 281 RKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSS 340

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            ++ LL+LM   G  KP++ T+  ++ A+C E N+  A     ++   G+  + + YN +
Sbjct: 341 YALHLLNLMIENG-CKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIM 399

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
            + Y +  +  QA  +  EM    + P+G T   +++G+ + GK ++  R  R +   G+
Sbjct: 400 ISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGL 459

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
             +  + ++ + G       D   ++L  +    + P V+ +++I+ A+  AG  ++   
Sbjct: 460 LHDSSLCDVTVAGLCWAGRYDEAMKLLENLLGKGIPPSVVAFNSIIAAYGNAGLEERAFY 519

Query: 375 IFDDMGKAGIKPDAH-----------------------------------AYSILAKGYV 399
            +  M K G+ P +                                    A+++L  GY 
Sbjct: 520 AYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYF 579

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           R      AE L   M   G  P+ V F   I+G C  G M  A +VF  M   G  PN  
Sbjct: 580 RIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNF 639

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
            + +L+ G+ +  +   A ++++ M   G+ P   T  ++       GL K+ +  L+
Sbjct: 640 VYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVNMI-----ICGLCKQGRMKLA 692


>gi|449435168|ref|XP_004135367.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Cucumis sativus]
          Length = 962

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 223/466 (47%), Gaps = 38/466 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   + G  + A   F    E     + + Y  ++ A   +   +   +++ ++EE G
Sbjct: 387 LVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEG 446

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +D     ++ +++ ++  G+ ++ +  F + KE GL P+  TY  LI  Y   GK  +++
Sbjct: 447 IDAPIDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKAL 506

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++   M   G +K N++TY++L+  +   K+   A+ +   +   G+KPDVV YN I TA
Sbjct: 507 EVSKEMEHAG-IKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITA 565

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           +   G+ D+A   + EM+    +P  RT   II G+ ++G++K+AL     M+  G  P 
Sbjct: 566 FCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPT 625

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  +N LI G VE    +  +++L  M    V+P+  TY+TIM+ +++ G   K    F 
Sbjct: 626 VHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFT 685

Query: 378 DMGKAGIKPDAHA-----------------------------------YSILAKGYVREQ 402
            +   G++ D +                                    Y+IL  G+ R  
Sbjct: 686 KLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRG 745

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           +  +A +L+  M   G  P++  +T+ I+     G M RA +  ++M   GV PN+KT+ 
Sbjct: 746 DIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYT 805

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF--LLLAEARRAT 506
           TL+ G++ A  P +A    + MK  G+ P ++ +  L+ +   RAT
Sbjct: 806 TLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRAT 851



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 217/479 (45%), Gaps = 36/479 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N    RG    A+  F  +   G +PS   YT L+ A  + +      S + +++E G
Sbjct: 317 MVNYYTRRGDMHRARETFEKMRARGIEPSSHVYTNLIHAYAVGRDMEEALSCVRKMKEEG 376

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++   + ++ +++ F+++GN E A   F + KE   +     Y  +I  Y      +++ 
Sbjct: 377 IEMSLVTYSILVSGFAKTGNAESADHWFQEAKEKHSSLNAIIYGNIIYAYCQRCNMDKAE 436

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L+  M  EG   P +  Y+ ++  +    +  +   V  +    G+ P V+TY  +   
Sbjct: 437 ALVREMEEEGIDAP-IDIYHTMMDGYTMVGDEDKCLLVFERFKECGLNPSVITYGCLINL 495

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           YA+ G+  +A EV  EMEH G++ N +T  ++I+G+ K      A      + + G+ P+
Sbjct: 496 YAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPD 555

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V++N +I  F  +   D     +  M++ R  P   T+  I++ ++  G M K  ++FD
Sbjct: 556 VVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFD 615

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M  +G  P  H Y+ L  G V +++ EKAE++L  M  +G  PN   +TTI+ G+ S G
Sbjct: 616 MMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLG 675

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMW------------------------------- 466
              +A   F K+ + G+  ++ T+E L+                                
Sbjct: 676 DTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYN 735

Query: 467 ----GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
               G++     W A +++Q MK  GV P   T+     A    G  + A + + ++K+
Sbjct: 736 ILIDGWARRGDIWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKS 794



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 204/426 (47%), Gaps = 2/426 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           +P+  QA+ +   E   KPS   Y  ++   T +   +       ++   G++P S  + 
Sbjct: 292 EPENWQAVVSAF-ERIKKPSRKEYGLMVNYYTRRGDMHRARETFEKMRARGIEPSSHVYT 350

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I+A++   +MEEA+    KMKE G+  +  TY+ L+ G+   G  E +       ++E
Sbjct: 351 NLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQ-EAKE 409

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            +   N   Y  ++ A+C   N+ +A  ++ +M   G+   +  Y+T+   Y   G+ D+
Sbjct: 410 KHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDK 469

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
              V    +  G+ P+  T G +I+ Y K GK+ +AL  ++ M+  G+  N+  +++LI 
Sbjct: 470 CLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLIN 529

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           GF+++ D      +   + +  + PDV+ Y+ I+ A+   G MD+      +M K   KP
Sbjct: 530 GFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKP 589

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
               +  +  G+ R+ E +KA ++   M  SG  P V  +  +I G      M++A ++ 
Sbjct: 590 TTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQIL 649

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           D+M   GVSPN  T+ T+M GY+      +A      ++  G+     T+  L +A   +
Sbjct: 650 DEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKS 709

Query: 507 GLTKEA 512
           G  + A
Sbjct: 710 GRMQSA 715



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 188/405 (46%), Gaps = 40/405 (9%)

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
           +E  N +  +  F ++K+    P+   Y  ++  Y   G    + +  + M   G ++P+
Sbjct: 291 TEPENWQAVVSAFERIKK----PSRKEYGLMVNYYTRRGDMHRARETFEKMRARG-IEPS 345

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
              Y  L+ A+   +++ EA + + KM   G++  +VTY+ + + +A+ G A+ A+    
Sbjct: 346 SHVYTNLIHAYAVGRDMEEALSCVRKMKEEGIEMSLVTYSILVSGFAKTGNAESADHWFQ 405

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           E +      N    G II  YC+   + +A    R M+E G+   + I++ ++ G+  + 
Sbjct: 406 EAKEKHSSLNAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVG 465

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           D D    V    KE  +NP VITY  ++N ++  G + K  E+  +M  AGIK +   YS
Sbjct: 466 DEDKCLLVFERFKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYS 525

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI--------- 443
           +L  G+++ ++   A  +   +I+ G  P+VV++  II+ +C  G MDRA+         
Sbjct: 526 MLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQ 585

Query: 444 --------------------------EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
                                     +VFD M   G  P + T+  L+ G  E R+  +A
Sbjct: 586 RHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKA 645

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           E+IL  M   GV P + T+  +     + G T +A    +K++++
Sbjct: 646 EQILDEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDE 690



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 159/323 (49%), Gaps = 1/323 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +++ + L+N  ++      A AIF +LI+ G KP +V Y  ++ A     + +     + 
Sbjct: 521 MKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVK 580

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++++    P +  F  +I+ F+  G M++A+D F  M+ SG  PT  TYN LI G     
Sbjct: 581 EMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKR 640

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K E++ ++LD M+  G V PN  TY  ++  + +  +  +A+    K+   G++ DV TY
Sbjct: 641 KMEKAEQILDEMTLAG-VSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTY 699

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +  A  ++G    A  V  EM    +  N     I+I G+ + G I EA    + MK 
Sbjct: 700 EALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDIWEAADLMQQMKR 759

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P++  +   I    +  D     + +  MK   V P+V TY+T++N W+ A   +K
Sbjct: 760 EGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEK 819

Query: 372 CKEIFDDMGKAGIKPDAHAYSIL 394
               F++M  +G+KPD   Y  L
Sbjct: 820 ALSCFEEMKLSGLKPDRAVYHCL 842



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 72/317 (22%), Positives = 153/317 (48%), Gaps = 31/317 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T R+   +++    +G+ ++A  +F+ +   G  P++ TY  L+  L  +++      I+
Sbjct: 590 TTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQIL 649

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+ P+   +  +++ ++  G+  +A   F K+++ GL     TY  L+K    +
Sbjct: 650 DEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFTYFTKLRDEGLQLDVYTYEALLKACCKS 709

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ + ++ +   MS + N+  N   YN+L+  W    +I EA ++M +M   G++PD+ T
Sbjct: 710 GRMQSALAVTKEMSAQ-NIPRNTFIYNILIDGWARRGDIWEAADLMQQMKREGVQPDIHT 768

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y +   A ++ G+  +A + I EM+  GV+PN +T   +I+G+ +    ++AL     MK
Sbjct: 769 YTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMK 828

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P+  +++ L+                           +++ +T+ +     G + 
Sbjct: 829 LSGLKPDRAVYHCLM-------------------------TSLLSRATVAHGCIYPGILS 863

Query: 371 KCKEIFD-----DMGKA 382
            C+E+ D     DMG A
Sbjct: 864 VCREMVDCELTVDMGTA 880


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 220/459 (47%), Gaps = 40/459 (8%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+ +  +++E G K     +T L   L  + +F+ +  + + +   G+      +  V++
Sbjct: 3   AKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 151 AFSESGNMEEAMDTFWKMKESGL-TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
               +G   +A++   ++  SG+ TPT   YN +I G   A +  ++ K+L+ M  E ++
Sbjct: 63  GLCGAGMANQALELVREL--SGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEE-SI 119

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            PN+ TY +L+   C       A  V  +M  +G KP+ +TY T+    ++ GE D+A  
Sbjct: 120 VPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALR 179

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           V++E     +  +  TC  I+ G CK  ++ +AL+F   M++ GV PN V ++ L+ GF 
Sbjct: 180 VMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFR 239

Query: 330 EIMDRDGV---------------------------------DEVLALMKEFR---VNPDV 353
           +  + D V                                 D     ++E R   V PDV
Sbjct: 240 QHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDV 299

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           +TYS ++N ++ AG  D   E+ +DM + G+KPD   YS L     +E++ + A  LL  
Sbjct: 300 VTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLEL 359

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M  +G  PNVV + +++ G C  G MD    V++ M +   SP++ T+  +M G S+A  
Sbjct: 360 MEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGM 419

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
              A ++ +++K+    P  + + ++  +    G  +EA
Sbjct: 420 LDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 182/383 (47%), Gaps = 1/383 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+N L    K + A+ +F  +   G KP+ +TY TL+  L+     +    +M 
Sbjct: 123 VFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMI 182

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +     +  D I    ++    ++  +++A+    +M++ G+ P   TY+ L+ G+   G
Sbjct: 183 EQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHG 242

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +  ++  +              Y   + A C    +  A   + ++  SG+ PDVVTY
Sbjct: 243 ELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTY 302

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +   +A+ G+ D + E++ +M  NGV+P+  T   +I+  CKE K ++A R    M+ 
Sbjct: 303 SMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEA 362

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PN+V +N ++ G  +    D V  V  +M + R +PDV+TYS IMN  S AG +D 
Sbjct: 363 AGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDS 422

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV-IFTTII 430
             ++F+ +  +   PDA AYS++     R  + E+A  +   M  +    N+      ++
Sbjct: 423 AVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLV 482

Query: 431 SGWCSDGSMDRAIEVFDKMCEHG 453
           +  C     D A  + +   E G
Sbjct: 483 AALCDAKRTDSARRIVEVARERG 505


>gi|357123295|ref|XP_003563347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Brachypodium distachyon]
          Length = 800

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 208/434 (47%), Gaps = 1/434 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   EA A F +L   GH P +VTY  LL        +     ++ ++EE+G  PD++ +
Sbjct: 272 GLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTY 331

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +  +++ +G  EEA      M   G+ P   TYNT++  YG AGK +E++ L D M +
Sbjct: 332 NELAGSYARAGFYEEAAKCLDTMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKK 391

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G + P + TYN+++     +        ++ +M+ SG  P+ VT+NT+     + G   
Sbjct: 392 NGFI-PYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEG 450

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
               V+  M+  GV+    T   +IS Y + G    A +    M   G  P L  +N L+
Sbjct: 451 YVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALL 510

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                  D      ++  MK     P+ ++YS ++   +  G     + I  ++ +  + 
Sbjct: 511 SVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVF 570

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P       L     + +  E  E     ++  G  P++VIF +++S +  +G   +A E+
Sbjct: 571 PSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEM 630

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           FD + + G+SP+L T+ ++M  Y+++ + W AE+IL+ +K   + P   ++  +      
Sbjct: 631 FDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCK 690

Query: 506 TGLTKEAKRILSKI 519
            GL KEA+RILS++
Sbjct: 691 QGLIKEAQRILSEM 704



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 108/492 (21%), Positives = 220/492 (44%), Gaps = 38/492 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+    + G   EA  +   + E G KP  VTY  L  +      +      + 
Sbjct: 293 VVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLD 352

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ P++  +N ++ A+  +G ++EA+  F  MK++G  P  +TYN ++   G   
Sbjct: 353 TMVSKGILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKS 412

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI---------------------- 229
           +    +++L  MSR G   PN  T+N ++ A C ++ +                      
Sbjct: 413 RFNVMLEMLGEMSRSG-CTPNRVTWNTML-AVCGKRGMEGYVTRVLERMKSCGVELCRDT 470

Query: 230 --------------TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
                           A+ +  +M A+G  P + TYN + +  ++ G+   A+ +I +M+
Sbjct: 471 FNTLISAYGRCGSRANAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMK 530

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
           + G +PN  +  +++  + K G         + + E  V P+ VI   L+    +    +
Sbjct: 531 NEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLE 590

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
           G++     +      PD++ ++++++ ++  G   K  E+FD + + G+ PD   Y+ + 
Sbjct: 591 GIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMM 650

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
             Y +  E  +AE++L  +  S   P+VV + T+++G+C  G +  A  +  +M   GV 
Sbjct: 651 DMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVR 710

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P + T+ TL+ GY+       A E++  M    + P + T+  + ++        EA+  
Sbjct: 711 PCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSPMELTYRRVVDSYCKAKRFDEARGF 770

Query: 516 LSKIKNKERTNE 527
           L +I   +R ++
Sbjct: 771 LYEIAETDRNSD 782



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 202/451 (44%), Gaps = 4/451 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           VR+ T ++++L   G+ + A  +F  L   G  P+ V Y  +L     + + +  I +++
Sbjct: 187 VRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRSWPQIVAML 246

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G++PD    + VI A    G ++EA+  F  +K  G  P   TYN L++ +G A
Sbjct: 247 EEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNALLQVFGKA 306

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E++++L  M   G  KP+  TYN L  ++       EA   +  M + G+ P+  T
Sbjct: 307 GNYMEALRVLKEMEESG-CKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKGILPNAFT 365

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNTI TAY   G+ D+A  +   M+ NG  P   T  +I+    K+ +    L     M 
Sbjct: 366 YNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMS 425

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PN V +N ++    +      V  VL  MK   V     T++T+++A+   G   
Sbjct: 426 RSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRA 485

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              +++D+M  AG  P    Y+ L     R+ +   A+ ++  M   GF PN + ++ ++
Sbjct: 486 NAFKMYDEMTAAGFTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLL 545

Query: 431 SGWCSDGSMDRAIEVFDKMCEHG-VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
                 G+    IE  +K    G V P+     TL+    + R+    E   Q + A G 
Sbjct: 546 QCHAKGGNAA-GIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGH 604

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            P    F  +       G+ ++A  +   IK
Sbjct: 605 KPDLVIFNSMLSMYAKNGMYRKAGEMFDSIK 635



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/422 (23%), Positives = 190/422 (45%), Gaps = 36/422 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M +    GK  EA A+F+ + + G  P + TY  +L  L  + RFN +  ++ ++  +G
Sbjct: 369 IMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVMLEMLGEMSRSG 428

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + +N ++    + G          +MK  G+     T+NTLI  YG  G    + 
Sbjct: 429 CTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISAYGRCGSRANAF 488

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+ D M+  G   P L TYN L+     + + T A ++++KM   G KP+ ++Y+ +   
Sbjct: 489 KMYDEMTAAG-FTPCLTTYNALLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQC 547

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPN--------------GRTCGI--------------- 288
           +A+ G A   E +  E+    V P+               R  GI               
Sbjct: 548 HAKGGNAAGIEAIEKEVYEGTVFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPD 607

Query: 289 ------IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
                 ++S Y K G  ++A     ++K+ G+ P+L+ +N ++  + +  +    +++L 
Sbjct: 608 LVIFNSMLSMYAKNGMYRKAGEMFDSIKQGGLSPDLITYNSMMDMYAKSNESWEAEKILK 667

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            +K  ++ PDV++Y+T+MN +   G + + + I  +M   G++P    Y  L  GY   +
Sbjct: 668 RLKTSQLKPDVVSYNTVMNGFCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYASRE 727

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
              +A E++  MI+    P  + +  ++  +C     D A     ++ E   + + K   
Sbjct: 728 MFSEAREVVSYMIQRNLSPMELTYRRVVDSYCKAKRFDEARGFLYEIAETDRNSDQKLLS 787

Query: 463 TL 464
           TL
Sbjct: 788 TL 789



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/359 (24%), Positives = 161/359 (44%), Gaps = 3/359 (0%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           +++ A   SG+ E A+     ++  G     +    +++     G+ +    LLD M   
Sbjct: 119 SLLKALELSGHWEWALALVRWVRAEGGAADAAALEMVVRTLAREGQHDAVCDLLDEMLPL 178

Query: 207 GNVKPNL--RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
               P L  R Y  ++ A  +E     A  +  ++   G+ P  V YN +   Y + G +
Sbjct: 179 PPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKREGVAPTHVMYNVMLDVYGRMGRS 238

Query: 265 -DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
             Q   ++ EM   GV+P+G T   +I+   ++G + EA+ F   +K  G  P +V +N 
Sbjct: 239 WPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVDEAVAFFEDLKSRGHVPCVVTYNA 298

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           L++ F +  +      VL  M+E    PD +TY+ +  +++ AGF ++  +  D M   G
Sbjct: 299 LLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELAGSYARAGFYEEAAKCLDTMVSKG 358

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           I P+A  Y+ +   Y    + ++A  L   M ++GF P V  +  I+         +  +
Sbjct: 359 ILPNAFTYNTIMTAYGNAGKVDEALALFDWMKKNGFIPYVNTYNLILGMLGKKSRFNVML 418

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           E+  +M   G +PN  T+ T++    +         +L+ MK+ GV   + TF  L  A
Sbjct: 419 EMLGEMSRSGCTPNRVTWNTMLAVCGKRGMEGYVTRVLERMKSCGVELCRDTFNTLISA 477



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/291 (22%), Positives = 130/291 (44%), Gaps = 1/291 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L  +G    AQ+I N +   G KP+ ++Y+ LL           I +I  +V E  
Sbjct: 509 LLSVLSRQGDWTAAQSIINKMKNEGFKPNDMSYSLLLQCHAKGGNAAGIEAIEKEVYEGT 568

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P  +    ++ +  +   +E     F ++   G  P    +N+++  Y   G   ++ 
Sbjct: 569 VFPSWVILRTLVISNFKCRRLEGIERAFQEVMARGHKPDLVIFNSMLSMYAKNGMYRKAG 628

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++ D + ++G + P+L TYN ++  +       EA  ++ ++  S +KPDVV+YNT+   
Sbjct: 629 EMFDSI-KQGGLSPDLITYNSMMDMYAKSNESWEAEKILKRLKTSQLKPDVVSYNTVMNG 687

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G   +A+ ++ EM  +GV+P   T   ++ GY       EA      M +  + P 
Sbjct: 688 FCKQGLIKEAQRILSEMIADGVRPCVVTYHTLVGGYASREMFSEAREVVSYMIQRNLSPM 747

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
            + +  ++  + +    D     L  + E   N D    ST+     +A F
Sbjct: 748 ELTYRRVVDSYCKAKRFDEARGFLYEIAETDRNSDQKLLSTLTARVESAQF 798



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 93/202 (46%), Gaps = 8/202 (3%)

Query: 329 VEIMDRDGV-DEVLALMKEFRVNP------DVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           V  + R+G  D V  L+ E    P      DV  Y+T+++A S  G  ++  E+F ++ +
Sbjct: 156 VRTLAREGQHDAVCDLLDEMLPLPPGSPGLDVRAYTTVLHALSHEGRYERALELFAELKR 215

Query: 382 AGIKPDAHAYSILAKGYVREQEP-EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
            G+ P    Y+++   Y R      +   +L  M  +G  P+    +T+I+    DG +D
Sbjct: 216 EGVAPTHVMYNVMLDVYGRMGRSWPQIVAMLEEMRAAGVEPDGFTASTVIAACGRDGLVD 275

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            A+  F+ +   G  P + T+  L+  + +A     A  +L+ M+  G  P   T+  LA
Sbjct: 276 EAVAFFEDLKSRGHVPCVVTYNALLQVFGKAGNYMEALRVLKEMEESGCKPDAVTYNELA 335

Query: 501 EARRATGLTKEAKRILSKIKNK 522
            +    G  +EA + L  + +K
Sbjct: 336 GSYARAGFYEEAAKCLDTMVSK 357


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 126/491 (25%), Positives = 223/491 (45%), Gaps = 67/491 (13%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P   TY T+L  L I K++     +M+++  N   P+ + F   I +F ++G ++ A+  
Sbjct: 5   PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 64

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
             +M   G TP    Y+TLI G+   G  ++++ LL+ M      KPN   YN  ++  C
Sbjct: 65  LDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML----CKPNTVCYNAALKGLC 120

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
             +   +   +M +M   G  P+  T++ + ++  QN   D A EV+ +ME  G +P+  
Sbjct: 121 IAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTV 180

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------------- 328
              III+   + G++ +ALR   +M      P+ + FN ++KGF                
Sbjct: 181 NYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQM 237

Query: 329 ---------------VEIMDRDGV----DEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
                          ++++ ++G+     +V   M  +R  PD++TYS+++N +S  G +
Sbjct: 238 FRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLV 297

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +   ++F  M     KPD  +Y+ + KG  R    E A EL+  M+     PN V F  +
Sbjct: 298 EVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNIL 354

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I+  C  G +DRAIEV ++M  +G +P++ T+  L+ G+SE     R ++ L+++     
Sbjct: 355 INSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQ---GRLDDALKLLSTMSC 411

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATT 549
            P   ++                    S +K   R    +  E++  E L         T
Sbjct: 412 KPDAISY-------------------NSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVT 452

Query: 550 ASYPNLLQIPN 560
             Y N L +PN
Sbjct: 453 FKYANHLLMPN 463



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 174/388 (44%), Gaps = 39/388 (10%)

Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA 232
           + P T TYNT++KG  IA K EE+ +L+  M R     PN  T+   +R++C    +  A
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIR-NRCPPNEVTFATQIRSFCQNGLLDRA 61

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
             ++ +M   G  PDVV Y+T+   +++ G  DQA +++  M     +PN       + G
Sbjct: 62  VQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKG 118

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
            C   + ++       M   G  PN   F++LI    +    D   EVL  M+++   PD
Sbjct: 119 LCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPD 178

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
            + Y+ I+N+ S  G +D    + + M     KPDA  ++ + KG+ R +    A EL+ 
Sbjct: 179 TVNYNIIINSLSERGRVDDALRLLNSM---VCKPDALGFNAVLKGFCRAERWHDASELIA 235

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE-- 470
            M         + F  +I   C +G ++ A +VF++M  +  +P++ T+ +L+ G+SE  
Sbjct: 236 QMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQG 295

Query: 471 ----ARQPWR--------------------------AEEILQIMKAFGVHPQKSTFLLLA 500
               A Q +R                          A E++  M      P + TF +L 
Sbjct: 296 LVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILI 355

Query: 501 EARRATGLTKEAKRILSKIKNKERTNEM 528
            +    GL   A  +L ++ N   T ++
Sbjct: 356 NSLCQKGLVDRAIEVLEQMPNYGSTPDI 383



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/279 (24%), Positives = 139/279 (49%), Gaps = 10/279 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++NSL ERG+  +A  + N+++    KP  + +  +L      +R++    +++Q+  + 
Sbjct: 185 IINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDD 241

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
                + FN +I+   ++G +  A   F +M     TP   TY++L+ G+   G  E ++
Sbjct: 242 CPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAI 301

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L     R    KP++ +YN +++  C      +A  ++ +M      P+ VT+N +  +
Sbjct: 302 QLF----RSMPCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINS 357

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             Q G  D+A EV+ +M + G  P+  T   +I+G+ ++G++ +AL+   TM      P+
Sbjct: 358 LCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPD 414

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
            + +N  +KG          +E++A M   +  P+ +T+
Sbjct: 415 AISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 453



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/145 (23%), Positives = 68/145 (46%), Gaps = 4/145 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   ++  L    + ++A  +   ++     P+ VT+  L+ +L  +   +    ++ 
Sbjct: 313 IFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLE 372

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+   G  PD   +NA+IN FSE G +++A+     M      P   +YN+ +KG   A 
Sbjct: 373 QMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAE 429

Query: 192 KPEESVKLLDLMSREGNVKPNLRTY 216
           + +++ +L+  M R     PN  T+
Sbjct: 430 RWQDAEELVAEMLR-NKCTPNEVTF 453


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 222/447 (49%), Gaps = 17/447 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   ++G+P + + +   +   G +P++V+Y  LL  L   +R++    ++  +   G
Sbjct: 16  LVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDMISRG 75

Query: 138 --MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
               PD + ++ +++ + ++G +EE+ +   ++   GL P    Y  ++     + +  E
Sbjct: 76  GRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSARLGE 135

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +++LL+ M R G   P L T+N L+   C EKN+  A +++  MAASG+K DVVTYNT+ 
Sbjct: 136 ALELLEEMIRAGCC-PTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLM 194

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G   +AE+++  M+ +G  P+       + G CK GK+  A +    M++    
Sbjct: 195 DGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHD 254

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR----VNPDVITYSTIMNAWSTAGFMDK 371
           PN+V +N ++ G  +      +D  L +M++         +V+ YST+++     G   +
Sbjct: 255 PNVVTYNTILDGLCK---SGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            + + + M +AG +PD   YS L  G  +  + E+A E +  M   G  PN V + +++ 
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371

Query: 432 GWCSDGSMDRAIEVFDKM------CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           G CS G +  A  + ++M       +H   P++ T+  L+ G  +A +   A +  Q M+
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGDH-CPPSVSTYNALIGGLCKAGRIDDALKFFQRMR 430

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEA 512
           + G  P   ++  + E    +G   +A
Sbjct: 431 SQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/348 (28%), Positives = 177/348 (50%), Gaps = 4/348 (1%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M  +G  P + T+N L+ G+   G+P +  +LL+ M+  G ++PN+ +YN L+   C  +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARG-IQPNVVSYNGLLEGLCKLE 59

Query: 228 NITEAWNVMHKMAASGMK--PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
              EA  ++  M + G +  PD+VTY+T+ + Y + G+ +++ E++ E+   G++P+   
Sbjct: 60  RWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALM 119

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
              +++  CK  ++ EAL     M   G  P L+ FN LI G     + +  D +L  M 
Sbjct: 120 YTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMA 179

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
              V  DV+TY+T+M+    AG + + +++ + M  +G  PD  AYS    G  +  +  
Sbjct: 180 ASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVL 239

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETL 464
            A ++L  M +S   PNVV + TI+ G C  G +D A+E+ ++M    G   N+  + T+
Sbjct: 240 NAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           + G  +  +   A  +++ M   G  P   T+  L       G  +EA
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEA 347



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 190/389 (48%), Gaps = 2/389 (0%)

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           ++  G  P+S+ FNA++N FS+ G   +       M   G+ P   +YN L++G     +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 193 PEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E+ +L+ D++SR G   P+L TY+ L+  +C    + E+  ++ ++ + G++PD + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +  +  ++    +A E++ EM   G  P   T   +ISG C+E  ++ A    +TM  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV  ++V +N L+ G  +       +++L  MK     PDV+ YS+ +     +G +  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES-GFHPNVVIFTTII 430
             ++ + M  +   P+   Y+ +  G  +  + + A E++  M  S G   NVV ++T++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G C  G    A  V + M   G  P++ T+ +L+ G  +A +   A E ++ M   G  
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
           P   T+  L     + G   EA+R++ ++
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEM 389



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 91/331 (27%), Positives = 159/331 (48%), Gaps = 7/331 (2%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           TK+M SL +  +  EA  +   +I  G  P+L+T+ TL++    +K      S++  +  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +G+  D + +N +++   ++G ++EA     +MK SG  P    Y++ + G   +GK   
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYNTI 254
           + ++L+ M R+ +  PN+ TYN ++   C    I  A  +M +MA+S G   +VV Y+T+
Sbjct: 241 AHQVLEQM-RDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTV 299

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                + G   +A  V+  M   G +P+  T   +++G CK GKI+EA+   R M   G 
Sbjct: 300 VDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGC 359

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF-----RVNPDVITYSTIMNAWSTAGFM 369
            PN V +  L+ G          + ++  M           P V TY+ ++     AG +
Sbjct: 360 KPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRI 419

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           D   + F  M   G  PD  +YS + +G  R
Sbjct: 420 DDALKFFQRMRSQGCDPDGVSYSTIVEGLAR 450



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 78/304 (25%), Positives = 146/304 (48%), Gaps = 5/304 (1%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C T+ +   L++        + A ++   +   G K  +VTY TL+  L    R      
Sbjct: 149 CPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQ 208

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++ +++ +G  PD + +++ +    +SG +  A     +M++S   P   TYNT++ G  
Sbjct: 209 LLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLC 268

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            +GK + ++++++ M+       N+  Y+ +V   C      EA +VM  MA +G +PDV
Sbjct: 269 KSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDV 328

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTY+++     + G+ ++A E + EM   G +PN  T   ++ G C  G++ EA R    
Sbjct: 329 VTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEE 388

Query: 309 MKEYGVH-----PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
           M   G       P++  +N LI G  +    D   +    M+    +PD ++YSTI+   
Sbjct: 389 MSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGL 448

Query: 364 STAG 367
           + +G
Sbjct: 449 ARSG 452



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 134/252 (53%), Gaps = 2/252 (0%)

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M+  G  PN  T   +++G+ K+G+  +  R   TM   G+ PN+V +N L++G  ++  
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 334 RDGVDEVLALM--KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
               +E++  M  +  R  PD++TYST+++ +  AG +++ +E+  ++   G++PDA  Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + +     +     +A ELL  MI +G  P ++ F T+ISG C + +++ A  +   M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            GV  ++ T+ TLM G  +A +   AE++L+ MKA G  P    +         +G    
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 512 AKRILSKIKNKE 523
           A ++L ++++ +
Sbjct: 241 AHQVLEQMRDSD 252


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 217/445 (48%), Gaps = 1/445 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++NSL          ++   +++ G +PS+VT+T L+  L ++        ++  VE+ G
Sbjct: 117 VINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTG 176

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              D   +  +IN   + G   EA+    KM+E    P    Y+T++ G    G   E++
Sbjct: 177 YRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEAL 236

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   MS +G +KPNL TY  L++  CN     EA +++ +M   G+ PD+ + N +   
Sbjct: 237 GLCLEMSGKG-IKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDV 295

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+  QA+ VI  M   G  P+  T   +I  YC + ++ EA R    M   G  P+
Sbjct: 296 LCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPD 355

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +  LI G+ +I + +    +L  M +    PDV+T++T++  +   G     KE+F 
Sbjct: 356 IVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFL 415

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K G  P+    +I+  G  + Q   +A  L   M +S    N+VI++ I+ G CS G
Sbjct: 416 NMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAG 475

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ A+E+F  +   G+  N+  +  ++ G+++     +AE++L  M+  G  P   T+ 
Sbjct: 476 KLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYN 535

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
           +  +   A      + + L+ +++K
Sbjct: 536 VFVQGLVAEREIARSIKYLTMMRDK 560



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 96/344 (27%), Positives = 178/344 (51%), Gaps = 1/344 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +M+ L + G   EA  +   +   G KP+LVTYT L+  L    R+    S++ ++ +
Sbjct: 220 STVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMK 279

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ PD    N +++   + G + +A      M   G  P   TYN+LI  Y +  + +E
Sbjct: 280 MGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDE 339

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + ++ +LM   G + P++  Y  L+  WC  KNI +A +++ +M   G  PDVVT+ T+ 
Sbjct: 340 ATRVFELMVSRGCL-PDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLI 398

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + Q G    A+E+ + M   G  PN +TC II+ G CK   + EAL     M++  + 
Sbjct: 399 GGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLD 458

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            N+VI+++++ G       +   E+ + +    +  +V  Y+ ++N ++  G +DK +++
Sbjct: 459 LNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDL 518

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
             +M + G  PD+  Y++  +G V E+E  ++ + L  M + GF
Sbjct: 519 LSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGF 562



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/438 (26%), Positives = 206/438 (47%), Gaps = 40/438 (9%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN-GMDPDSIFFNAV 148
           EA   F+ + +    PS++ +T LL  +   K + +  S++ ++  + G+ PD+   N V
Sbjct: 58  EALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFILNVV 117

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           IN+      +         M + GL P+  T+  LI G  + G    +V+L+D + + G 
Sbjct: 118 INSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEKTG- 176

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            + +++TY VL+   C     +EA   + KM      P+VV Y+T+     ++G   +A 
Sbjct: 177 YRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEAL 236

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            + +EM   G++PN  T   +I G C  G+ KEA      M + GV P+L   N+L    
Sbjct: 237 GLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNIL---- 292

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
           V+++ ++G                      IM A S  GFM    E+          PD 
Sbjct: 293 VDVLCKEG---------------------KIMQAKSVIGFMILVGEV----------PDV 321

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y+ L   Y  + + ++A  +   M+  G  P++V +T++I GWC   ++++A+ + D+
Sbjct: 322 FTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDE 381

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M + G +P++ T+ TL+ G+ +  +P  A+E+   M  +G  P   T  ++ +    + L
Sbjct: 382 MIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQL 441

Query: 509 TKEAKRILSKIKNKERTN 526
             EA   LS     E++N
Sbjct: 442 LSEA---LSLFHAMEKSN 456



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 110/425 (25%), Positives = 203/425 (47%), Gaps = 1/425 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + T L+N L  +G    A  + +++ + G++  + TY  L+  L    + +     +
Sbjct: 145 SVVTFTILINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWL 204

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++EE   +P+ + ++ V++   + G + EA+    +M   G+ P   TY  LI+G    
Sbjct: 205 RKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNF 264

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ +E+  LLD M + G V P+L++ N+LV   C E  I +A +V+  M   G  PDV T
Sbjct: 265 GRWKEAGSLLDEMMKMG-VMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFT 323

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++   Y    + D+A  V   M   G  P+      +I G+CK   I +A+     M 
Sbjct: 324 YNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMI 383

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G  P++V +  LI GF ++       E+   M ++   P++ T + I++    +  + 
Sbjct: 384 KVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLS 443

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +F  M K+ +  +   YSI+  G     +   A EL   +   G   NV  +T +I
Sbjct: 444 EALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMI 503

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+   G +D+A ++   M E+G  P+  T+   + G    R+  R+ + L +M+  G  
Sbjct: 504 NGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFS 563

Query: 491 PQKST 495
              +T
Sbjct: 564 VDATT 568



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 118/291 (40%), Gaps = 36/291 (12%)

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN-GVQPNGRT 285
           K+I EA N  H MA     P V+ +  +     +      A  ++ EM  + G++P+   
Sbjct: 54  KSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPDTFI 113

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
             ++I+  C    +        TM + G+ P++V F +LI G                  
Sbjct: 114 LNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGL----------------- 156

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
                                G + +  E+ D + K G + D   Y +L  G  +  +  
Sbjct: 157 ------------------CVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTS 198

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +A   L  M E  ++PNVV+++T++ G C DG +  A+ +  +M   G+ PNL T+  L+
Sbjct: 199 EAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLI 258

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
            G     +   A  +L  M   GV P   +  +L +     G   +AK ++
Sbjct: 259 QGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVI 309


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 213/440 (48%), Gaps = 11/440 (2%)

Query: 80  NSLIER----GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           NSLI+     G+  E + +   +   G K  +VTY  L+       R  + +   + ++ 
Sbjct: 227 NSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKR 286

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+  + + F+  ++AF + G + EAM  F +M+  G+     TY  LI G   AG+ ++
Sbjct: 287 EGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDD 346

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++ LLD M R+G V  N+ TY VLV   C E+ + EA +V+  M  +G++ + + Y T+ 
Sbjct: 347 AIVLLDEMVRQG-VPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLI 405

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             +  N  +++A  ++ EM++ G++ +    G +I G C   K+ EA      M E G+ 
Sbjct: 406 HGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLE 465

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKC 372
           PN +I+  ++    +      V E +A++++       P+VITY  +++    AG +D+ 
Sbjct: 466 PNYIIYTTMMDACFK---SGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEA 522

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
              F+ M   G+ P+  AY+ L  G  +     +A +L   M+  G   + V++T ++ G
Sbjct: 523 ISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDG 582

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +   G++  A  +  KM + G+  +L  +   + G+        A E+   M   G+ P 
Sbjct: 583 YLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPD 642

Query: 493 KSTFLLLAEARRATGLTKEA 512
           ++ +  L    +  G  +EA
Sbjct: 643 RAVYNCLISKYQKLGNLEEA 662



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 195/395 (49%), Gaps = 7/395 (1%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T+  N ++ R     +  +   L E    P++ T+  ++  L  +       S+ S+++E
Sbjct: 157 TRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKE 216

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  PD + FN++I+ + + G ++E      +M+ SG      TYN LI  +   G+ E 
Sbjct: 217 MGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMET 276

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +      M REG V  N+ T++  V A+C E  + EA  +  +M   GM  +  TY  + 
Sbjct: 277 AYGYFAAMKREG-VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLI 335

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G  D A  ++ EM   GV  N  T  +++ G CKE K+ EA    R M++ GV 
Sbjct: 336 DGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVR 395

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKC 372
            N +++  LI G    M+++  ++ L L+ E +   +  D+  Y  ++        +D+ 
Sbjct: 396 ANELLYTTLIHG--HFMNKNS-EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEA 452

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           K +   M ++G++P+   Y+ +     +  +  +A  +L  +++SGF PNV+ +  +I G
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDG 512

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            C  GS+D AI  F+KM + G+ PN++ +  L+ G
Sbjct: 513 LCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDG 547



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 212/449 (47%), Gaps = 13/449 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L +RG   +A      + E    P+  T   +L  L   +    +  +  Q+    
Sbjct: 128 LLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA-- 185

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+   FN VI+   + G + EA   F +MKE G  P   T+N+LI GYG  G+ +E  
Sbjct: 186 --PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L++ M R G  K ++ TYN L+  +C    +  A+     M   G+  +VVT++T   A
Sbjct: 244 QLVEEMRRSG-CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G   +A ++  +M   G+  N  T   +I G CK G++ +A+     M   GV  N
Sbjct: 303 FCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLN 362

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE--- 374
           +V + +L+ G  +       ++VL +M++  V  + + Y+T+++      FM+K  E   
Sbjct: 363 VVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH----FMNKNSEKAL 418

Query: 375 -IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +  +M   G++ D   Y  L +G     + ++A+ LL  M ESG  PN +I+TT++   
Sbjct: 419 GLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDAC 478

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G +  AI +  K+ + G  PN+ T+  L+ G  +A     A      M+  G+ P  
Sbjct: 479 FKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNV 538

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK 522
             +  L +     G   EA ++ +++ +K
Sbjct: 539 QAYTALVDGLCKNGCLNEAVQLFNEMVHK 567



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 159/335 (47%), Gaps = 1/335 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++   + G+  +A  + + ++  G   ++VTYT L+  L  +++      ++  +E+
Sbjct: 332 TCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEK 391

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+  + + +  +I+    + N E+A+    +MK  GL    S Y  LI+G     K +E
Sbjct: 392 AGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDE 451

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  LL  M   G ++PN   Y  ++ A      + EA  ++ K+  SG +P+V+TY  + 
Sbjct: 452 AKSLLTKMDESG-LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALI 510

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G  D+A     +M   G+ PN +    ++ G CK G + EA++    M   G+ 
Sbjct: 511 DGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMS 570

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            + V++  L+ G+++  +      + A M +  +  D+  Y+  ++ +     M + +E+
Sbjct: 571 LDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREV 630

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           F +M   GI PD   Y+ L   Y +    E+A  L
Sbjct: 631 FSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 31/302 (10%)

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC------------------------- 286
           +T+ +  A  G  D A   +  +    V PN RTC                         
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA 185

Query: 287 ------GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
                  I+I   CKEG++ EA      MKE G  P++V FN LI G+ +  + D V+++
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           +  M+      DV+TY+ ++N +   G M+     F  M + G+  +   +S     + +
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
           E    +A +L   M   G   N   +T +I G C  G +D AI + D+M   GV  N+ T
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  L+ G  + R+   AE++L++M+  GV   +  +  L         +++A  +LS++K
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 521 NK 522
           NK
Sbjct: 426 NK 427



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 145/308 (47%), Gaps = 1/308 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++ L +  K  EA+ +   + + G + + + YTTL+    + K       ++S
Sbjct: 363 VVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLS 422

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++  G++ D   + A+I        ++EA     KM ESGL P    Y T++     +G
Sbjct: 423 EMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSG 482

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  E++ +L  +   G  +PN+ TY  L+   C   +I EA +  +KM   G+ P+V  Y
Sbjct: 483 KVPEAIAMLQKILDSG-FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAY 541

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     +NG  ++A ++  EM H G+  +      ++ GY K+G + +A      M +
Sbjct: 542 TALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMID 601

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  +L  +   I GF  +       EV + M    + PD   Y+ +++ +   G +++
Sbjct: 602 SGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEE 661

Query: 372 CKEIFDDM 379
              + D+M
Sbjct: 662 AISLQDEM 669



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 1/200 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +M++  + GK  EA A+   +++ G +P+++TY  L+  L      +   S  +++ +
Sbjct: 472 TTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRD 531

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+DP+   + A+++   ++G + EA+  F +M   G++     Y  L+ GY   G   +
Sbjct: 532 LGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHD 591

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  L   M   G ++ +L  Y   +  +CN   + EA  V  +M   G+ PD   YN + 
Sbjct: 592 AFALKAKMIDSG-LQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650

Query: 256 TAYAQNGEADQAEEVIVEME 275
           + Y + G  ++A  +  EME
Sbjct: 651 SKYQKLGNLEEAISLQDEME 670



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 64/134 (47%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++ T L++ L + G   EA  +FN ++  G     V YT LL     Q   +   ++ +
Sbjct: 538 VQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKA 597

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ ++G+  D   +   I+ F     M EA + F +M   G+ P  + YN LI  Y   G
Sbjct: 598 KMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLG 657

Query: 192 KPEESVKLLDLMSR 205
             EE++ L D M R
Sbjct: 658 NLEEAISLQDEMER 671


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 189/371 (50%), Gaps = 1/371 (0%)

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           M+   +  E    P   TY  LI+         +++KLLD M   G  KP++ TYNVLV 
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRG-CKPDVVTYNVLVN 59

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C E  + EA   ++ M + G +P+V+T+N I  +    G    AE+++ EM   G  P
Sbjct: 60  GMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSP 119

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T  I+I+  C++G +  A+     M  +G  PN + +N L+ GF +    D   + L
Sbjct: 120 SVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYL 179

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
            +M      PD++TY+T++ A    G +D   E+ + +   G  P    Y+ +  G  + 
Sbjct: 180 EIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKV 239

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            + ++A ELL  M   G  P+V+ ++++I+G   +G ++ AI+ F  +   GV PN  T+
Sbjct: 240 GKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTY 299

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            ++M+G  +A+Q  RA + L  M + G  P + ++ +L E     GL KEA  +L+++ +
Sbjct: 300 NSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCS 359

Query: 522 KERTNEMEAEE 532
           +    +  AE+
Sbjct: 360 RGVVKKSSAEQ 370



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 183/361 (50%), Gaps = 1/361 (0%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           + +  +E    P ++TYT L+ A   +        ++ ++   G  PD + +N ++N   
Sbjct: 3   VLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMC 62

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           + G ++EA+     M   G  P   T+N +++     G+  ++ KLL  M R+G   P++
Sbjct: 63  KEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKG-CSPSV 121

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            T+N+L+   C +  +  A +++ KM   G  P+ ++YN +   + +  + D+A + +  
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M   G  P+  T   +++  CK+GK+  A+     +   G  P L+ +N +I G  ++  
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            D   E+L  M+   + PDVITYS+++   S  G +++  + F D+   G+KP+A  Y+ 
Sbjct: 242 TDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNS 301

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           +  G  + Q+ ++A + L  MI  G  P  V +T +I G  ++G    A+E+ +++C  G
Sbjct: 302 IMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361

Query: 454 V 454
           V
Sbjct: 362 V 362



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 174/334 (52%), Gaps = 2/334 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M    C+  V +   L+N + + G+  EA    N++   G +P+++T+  +L ++    R
Sbjct: 42  MGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGR 101

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +     +++++   G  P  + FN +IN     G +  A+D   KM   G TP + +YN 
Sbjct: 102 WMDAEKLLTEMVRKGCSPSVVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNP 161

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ G+    K + +++ L++M   G   P++ TYN ++ A C +  +  A  +++++++ 
Sbjct: 162 LLHGFCKEKKMDRAIQYLEIMVSRG-CYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSK 220

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P ++TYNT+    ++ G+ DQA E++ EM   G++P+  T   +I+G  +EGK++EA
Sbjct: 221 GCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEA 280

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           ++F   ++ +GV PN   +N ++ G  +    D   + LA M      P  ++Y+ ++  
Sbjct: 281 IKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEG 340

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            +  G   +  E+ +++   G+   + A  ++ +
Sbjct: 341 IANEGLAKEALELLNELCSRGVVKKSSAEQVVVR 374



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 168/359 (46%), Gaps = 9/359 (2%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           + KE    V + T L+ +        +A  + + +   G KP +VTY  L+  +  + R 
Sbjct: 8   LEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRL 67

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +     ++ +   G  P+ I  N ++ +   +G   +A     +M   G +P+  T+N L
Sbjct: 68  DEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNIL 127

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I      G    ++ +L+ M   G   PN  +YN L+  +C EK +  A   +  M + G
Sbjct: 128 INFLCRKGLLGRAIDILEKMPTHG-CTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRG 186

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             PD+VTYNT+ TA  ++G+ D A E++ ++   G  P   T   +I G  K GK  +A+
Sbjct: 187 CYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAV 246

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKE---FRVNPDVITYSTI 359
                M+  G+ P+++ ++ LI G    + R+G V+E +    +   F V P+  TY++I
Sbjct: 247 ELLHEMRGKGLKPDVITYSSLIAG----LSREGKVEEAIKFFHDVEGFGVKPNAFTYNSI 302

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           M     A   D+  +    M   G KP   +Y+IL +G   E   ++A ELL  +   G
Sbjct: 303 MFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/488 (23%), Positives = 231/488 (47%), Gaps = 40/488 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L + G   EA      +++ G   +L+TY+ L+  L   ++FN  +S++ 
Sbjct: 348 VVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLK 407

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +  E G  P+ + +N +I+ + + GN+ +A+     M   G+ P + T N++I+G+   G
Sbjct: 408 ETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIG 467

Query: 192 KPEESVKLLDLMSREG----------------------------------NVKPNLRTYN 217
           + E++  +L+ M   G                                  N++PN     
Sbjct: 468 QMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLT 527

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            LV   C E   ++A  +  ++   G   ++VT N +     + G   +A  ++ +M   
Sbjct: 528 TLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLER 587

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G   +  T   +ISG CKEGK++E  +    M + G+ P+   +NLLI G   I     +
Sbjct: 588 GFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRI---GKL 644

Query: 338 DEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           DE + L  E +   + P+V TY  +++ +  A  +++ +++F ++    ++ ++  Y+ L
Sbjct: 645 DEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTL 704

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            + Y R     +A +L   M   G  P    ++++I G C+ G M+ A  + D+M + G+
Sbjct: 705 IRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGL 764

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            PN+  +  L+ GY +  Q  +   +LQ M ++ +HP K T+ ++ +    +G  K A +
Sbjct: 765 LPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAK 824

Query: 515 ILSKIKNK 522
           +L ++  K
Sbjct: 825 LLHEMVGK 832



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 214/483 (44%), Gaps = 42/483 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ + + L+N L++  K  EA ++    +E G  P+ V Y TL+              I 
Sbjct: 382 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 441

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT---------------- 174
             +   G++P+S+  N++I  F + G ME+A     +M   G +                
Sbjct: 442 GDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMN 501

Query: 175 -------------------PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
                              P      TL+ G    GK  ++V+L   +  +G    NL T
Sbjct: 502 SRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG-FGANLVT 560

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
            N L+   C   N+ EA  ++ KM   G   D +TYNT+ +   + G+ ++  ++  EM 
Sbjct: 561 TNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMV 620

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
             G++P+  T  ++I G C+ GK+ EA+      K   + PN+  + ++I G+ +    D
Sbjct: 621 KQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCK---AD 677

Query: 336 GVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
            ++E   L  E     +  + + Y+T++ A+   G   +  ++ DDM   GI P    YS
Sbjct: 678 KIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYS 737

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            L  G       E A+ L+  M + G  PNVV +T +I G+C  G MD+ + V  +M  +
Sbjct: 738 SLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSY 797

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            + PN  T+  ++ GYS++     A ++L  M   G+ P   T+ +L       G  +E 
Sbjct: 798 DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEG 857

Query: 513 KRI 515
           K +
Sbjct: 858 KLL 860



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 184/388 (47%), Gaps = 5/388 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T +++ L    + + A      ++    +P+    TTL+  L  + + +    +  ++
Sbjct: 490 AFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRL 549

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E G   + +  NA+I+   ++GNM+EA+    KM E G      TYNTLI G    GK 
Sbjct: 550 LEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKV 609

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           EE  KL   M ++G ++P+  TYN+L+   C    + EA N+ ++  +  + P+V TY  
Sbjct: 610 EEGFKLRGEMVKQG-IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGV 668

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y +  + ++ E++  E+    ++ N      +I  YC+ G   EA +    M+  G
Sbjct: 669 MIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKG 728

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P    ++ LI G   I   +    ++  M++  + P+V+ Y+ ++  +   G MDK  
Sbjct: 729 IPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVV 788

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +  +M    I P+   Y+++  GY +  + + A +LL  M+  G  P+ V +  + +G+
Sbjct: 789 NVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGF 848

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
           C +G ++        + E GV  N   F
Sbjct: 849 CKEGKIEEG----KLLAEDGVGFNSPLF 872



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/461 (23%), Positives = 211/461 (45%), Gaps = 2/461 (0%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F  NK    TV++ T L++SL++  + +++  +F  + +G   P +  ++T + A     
Sbjct: 269 FLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMRQG-VSPDVYLFSTAINAFCKGG 327

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
           +      +   +E+ G+ P+ + +N +I+   + GN++EA     KM + G+  T  TY+
Sbjct: 328 KVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYS 387

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            LI G     K  E+  +L   + E    PN   YN L+  +C   N+ +A  +   M +
Sbjct: 388 VLINGLMKLEKFNEANSVLK-ETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVS 446

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G+ P+ VT N+I   + + G+ +QAE ++ EM   G   N      II   C   + + 
Sbjct: 447 KGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFES 506

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           ALRF R M    + PN  +   L+ G  +        E+   + E     +++T + +++
Sbjct: 507 ALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIH 566

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                G M +   +   M + G   D   Y+ L  G  +E + E+  +L   M++ G  P
Sbjct: 567 GLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEP 626

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +   +  +I G C  G +D A+ ++++     + PN+ T+  ++ GY +A +    E++ 
Sbjct: 627 DTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLF 686

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             +    +      +  L  A    G T EA ++   +++K
Sbjct: 687 TELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSK 727



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 120/497 (24%), Positives = 214/497 (43%), Gaps = 39/497 (7%)

Query: 62  FCMNKESCR---TVRSMTKLMNSLIERGKPQEAQAIFNNLIE------------------ 100
           F    +SC    T+RS   LM SLI  G    A+ +   LI+                  
Sbjct: 166 FYFASDSCGFRFTLRSYCVLMRSLIVSGFVSPARLLLIRLIDRKLPVLFGDPKNRHIEIA 225

Query: 101 ---------GGHKPSLVTYTTLLAALTIQKR---FNSIHSIMSQVEENGMDPDSIFFNAV 148
                    G    ++     L+     Q R   F +   +   +   G+ P       +
Sbjct: 226 SAMADLNEVGESGVAVAAVDLLIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFL 285

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           +++  ++  +E++   F  M++ G++P    ++T I  +   GK E++++L   M + G 
Sbjct: 286 LSSLVKANELEKSYWVFETMRQ-GVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLG- 343

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V PN+ TYN L+   C   N+ EA+    KM   G+   ++TY+ +     +  + ++A 
Sbjct: 344 VSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEAN 403

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            V+ E    G  PN      +I GYCK G + +ALR    M   G++PN V  N +I+GF
Sbjct: 404 SVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGF 463

Query: 329 VEIMDRDGVDEVL--ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
            +I   +  + +L   L + F +NP    ++TI++        +       +M    ++P
Sbjct: 464 CKIGQMEQAECILEEMLSRGFSINPG--AFTTIIHWLCMNSRFESALRFLREMLLRNMRP 521

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           +    + L  G  +E +   A EL   ++E GF  N+V    +I G C  G+M  A+ + 
Sbjct: 522 NDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLL 581

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            KM E G   +  T+ TL+ G  +  +     ++   M   G+ P   T+ LL       
Sbjct: 582 KKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRI 641

Query: 507 GLTKEAKRILSKIKNKE 523
           G   EA  + ++ K+++
Sbjct: 642 GKLDEAVNLWNECKSRD 658



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 48/206 (23%), Positives = 98/206 (47%), Gaps = 1/206 (0%)

Query: 63  CMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           C +++    V +   +++   +  K +E + +F  L+    + + V Y TL+ A      
Sbjct: 654 CKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGN 713

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +   +   G+ P +  ++++I+     G ME+A     +M++ GL P    Y  
Sbjct: 714 TVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTA 773

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY   G+ ++ V +L  MS   ++ PN  TY V++  +    ++  A  ++H+M   
Sbjct: 774 LIGGYCKLGQMDKVVNVLQEMSSY-DIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGK 832

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAE 268
           G+ PD VTYN +   + + G+ ++ +
Sbjct: 833 GIVPDTVTYNVLTNGFCKEGKIEEGK 858


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/524 (24%), Positives = 229/524 (43%), Gaps = 64/524 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+N     G+  +A    N +      P   TY T+L  L   K++     +M 
Sbjct: 178 VVTYTALINGYCRSGRLADA---LNLIASMPVAPDTYTYNTVLKGLCGAKQWEKAEELME 234

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  N   P+ + F   I +F ++G ++ A+    +M   G TP    Y+TL+ G+   G
Sbjct: 235 EMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQG 294

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + ++++ LL+ M      KPN   YN  ++  C  +   +   ++ +M      P+  T+
Sbjct: 295 RVDDALVLLNTML----CKPNTVCYNAALKGLCMAERWKDVGELIAEMVRKDCPPNEATF 350

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL-------- 303
           + + +   Q+G  D A EV+ +M+  G +P+      +I+ + ++G++ +AL        
Sbjct: 351 SMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRVDDALMLLDSMLC 410

Query: 304 ------------RFARTMKEYGVHPNL------------VIFNLLIKGFVEIMDRDGVDE 339
                          RT + Y V   +            + FN+LI    +    +   E
Sbjct: 411 NPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIE 470

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           V   M ++R  PD++TYS+++N +S  G ++   E+F  M     KPD  +Y+ + KG  
Sbjct: 471 VFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMP---CKPDIFSYNAVLKGLC 527

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           R    E A EL+  M      PN + F  +I+  C  G  DRAIEVF +M E+G +P++ 
Sbjct: 528 RAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIF 587

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+  L+ G+SE     R ++ L ++      P   ++                    S +
Sbjct: 588 TYNALINGFSEQ---GRLDDALNLLSTMSCKPDAISY-------------------NSTL 625

Query: 520 KNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVS 563
           K   R    +  E+I  E L +       T  Y N L IPN ++
Sbjct: 626 KGLCRAERWKEAEEIVAEMLRKKCPPNEVTFKYANQLFIPNRIT 669



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/380 (24%), Positives = 170/380 (44%), Gaps = 12/380 (3%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P  I  N +I        + +A      +KESG     S +NTL+ GY   G+  ++ ++
Sbjct: 108 PAVIACNILIKKLCAHRRLADAERVLDALKESGSADAVS-HNTLVAGYCRDGRLADAERV 166

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           L+     G    N+ TY  L+  +C    + +A N++  M  +   PD  TYNT+     
Sbjct: 167 LEAAKVSG--AANVVTYTALINGYCRSGRLADALNLIASMPVA---PDTYTYNTVLKGLC 221

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
              + ++AEE++ EM  N   PN  T    I  +C+ G +  A++    M  YG  P++V
Sbjct: 222 GAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVV 281

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           I++ L+ GF E   +  VD+ L L+      P+ + Y+  +     A       E+  +M
Sbjct: 282 IYSTLVNGFSE---QGRVDDALVLLNTMLCKPNTVCYNAALKGLCMAERWKDVGELIAEM 338

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            +    P+   +S+L     +    + A E++  M + G  P+VVI+ T+I+ +   G +
Sbjct: 339 VRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTLINYFSEQGRV 398

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D A+ + D M     +P+  +F   +       + +  EE++  M        + TF +L
Sbjct: 399 DDALMLLDSML---CNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLIEMTFNIL 455

Query: 500 AEARRATGLTKEAKRILSKI 519
            ++    GL   A  +  ++
Sbjct: 456 IDSLCQHGLVNHAIEVFEQM 475



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 67/256 (26%), Positives = 126/256 (49%), Gaps = 26/256 (10%)

Query: 256 TAYAQNGEADQAEEVIVEMEH-------NGVQPNGR-----TCGIIISGYCKEGKIKEAL 303
           TA A+ G A Q    +V++E         G  P+        C I+I   C   ++ +A 
Sbjct: 71  TAPARPGGAGQTLRRLVQLEDLDAALRLVGSMPSSEPPAVIACNILIKKLCAHRRLADAE 130

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVN--PDVITYSTIM 360
           R    +KE G   + V  N L+ G+     RDG + +   +++  +V+   +V+TY+ ++
Sbjct: 131 RVLDALKESG-SADAVSHNTLVAGYC----RDGRLADAERVLEAAKVSGAANVVTYTALI 185

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           N +  +G   +  +  + +    + PD + Y+ + KG    ++ EKAEEL+  MI +  H
Sbjct: 186 NGYCRSG---RLADALNLIASMPVAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCH 242

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN V F T I  +C +G +D A+++ ++M  +G +P++  + TL+ G+SE     R ++ 
Sbjct: 243 PNEVTFATQIRSFCQNGLLDHAVQLLERMPRYGCTPDVVIYSTLVNGFSEQ---GRVDDA 299

Query: 481 LQIMKAFGVHPQKSTF 496
           L ++      P    +
Sbjct: 300 LVLLNTMLCKPNTVCY 315


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 215/419 (51%), Gaps = 7/419 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            V +   L+N L   G+  EA A+ N ++  G    +VTY T++  +       S  +++
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S++EE  + PD + ++A+I+   + G+  +A   F +M E G+ P   TYN +I G+   
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344

Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           G+  ++ +LL D++ RE  + P++ T+N L+ A   E  + EA  +  +M    + PD V
Sbjct: 345 GRWSDAQRLLRDMIERE--INPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTV 402

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN++   + ++   D A+ +   M      P+  T   II  YC+  ++ E ++  R +
Sbjct: 403 TYNSMIYGFCKHNRFDDAKHMFDLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREI 458

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G+  N   +N LI GF E+ + +   ++   M    V PD IT + ++  +     +
Sbjct: 459 SRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKL 518

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           ++  E+F+ +  + I  D  AY+I+  G  +  + ++A +L  ++   G  P+V  +  +
Sbjct: 519 EEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVM 578

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ISG+C   ++  A  +F KM ++G  P+  T+ TL+ G  +A +  ++ E++  M++ G
Sbjct: 579 ISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNG 637



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 222/447 (49%), Gaps = 12/447 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L   ++E G   EA A+F+ ++E G  P ++T+ TL+  L ++ R     ++++++   G
Sbjct: 198 LFGYMVETG-FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D + +  ++N   + G+ + A++   KM+E+ + P    Y+ +I      G   ++ 
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQ 316

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M  +G + PN+ TYN ++  +C+    ++A  ++  M    + PDV+T+N + +A
Sbjct: 317 YLFSEMLEKG-IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISA 375

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+  +AE++  EM H  + P+  T   +I G+CK  +  +A    + M +    P+
Sbjct: 376 SVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA----KHMFDLMASPD 431

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
           +V FN +I  +        VDE + L++E     +  +  TY+T+++ +     ++  ++
Sbjct: 432 VVTFNTIIDVYCR---AKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQD 488

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +F +M   G+ PD    +IL  G+   ++ E+A EL   +  S    + V +  II G C
Sbjct: 489 LFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMC 548

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
               +D A ++F  +  HGV P+++T+  ++ G+        A  +   MK  G  P  S
Sbjct: 549 KGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNS 608

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKN 521
           T+  L       G   ++  ++S++++
Sbjct: 609 TYNTLIRGCLKAGEIDKSIELISEMRS 635



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 104/430 (24%), Positives = 199/430 (46%), Gaps = 20/430 (4%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T     K++   +   +P  A +++  +       ++ ++  L+       + +   S  
Sbjct: 105 TAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTF 164

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES---------------GLTP 175
            ++ + G  PD + FN +++       + EA+  F  M E+               GLTP
Sbjct: 165 GKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTP 224

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
              T+NTLI G  + G+  E+  L++ M  +G +  ++ TY  +V   C   +   A N+
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKG-LHIDVVTYGTIVNGMCKMGDTKSALNL 283

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
           + KM  + +KPDVV Y+ I     ++G    A+ +  EM   G+ PN  T   +I G+C 
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCS 343

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
            G+  +A R  R M E  ++P+++ FN LI   V+       +++   M    + PD +T
Sbjct: 344 FGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y++++  +      D  K +FD M      PD   ++ +   Y R +  ++  +LL  + 
Sbjct: 404 YNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKRVDEGMQLLREIS 459

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G   N   + T+I G+C   +++ A ++F +M  HGV P+  T   L++G+ E  +  
Sbjct: 460 RRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE 519

Query: 476 RAEEILQIMK 485
            A E+ ++++
Sbjct: 520 EALELFEVIQ 529



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 175/371 (47%), Gaps = 19/371 (5%)

Query: 140 PDSIF-FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           P +I+ FN +I  F +   +  ++ TF K+ + G  P   T+NTL+ G  +  +  E++ 
Sbjct: 138 PLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALA 197

Query: 199 LLDLMSREG--------------NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           L   M   G               + P + T+N L+   C E  + EA  +++KM   G+
Sbjct: 198 LFGYMVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGL 257

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
             DVVTY TI     + G+   A  ++ +ME   ++P+      II   CK+G   +A  
Sbjct: 258 HIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQY 317

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               M E G+ PN+  +N +I GF           +L  M E  +NPDV+T++ +++A  
Sbjct: 318 LFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASV 377

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G + + +++ D+M    I PD   Y+ +  G+ +    + A+ +   M      P+VV
Sbjct: 378 KEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVV 433

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            F TII  +C    +D  +++  ++   G+  N  T+ TL+ G+ E      A+++ Q M
Sbjct: 434 TFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEM 493

Query: 485 KAFGVHPQKST 495
            + GV P   T
Sbjct: 494 ISHGVCPDTIT 504



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 86/371 (23%), Positives = 172/371 (46%), Gaps = 40/371 (10%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +++ L + G   +AQ +F+ ++E G  P++ TY  ++       R++    ++  + E
Sbjct: 300 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 359

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             ++PD + FNA+I+A  + G + EA     +M    + P T TYN++I G+    + ++
Sbjct: 360 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 419

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  + DLM+      P++ T+N ++  +C  K + E   ++ +++  G+  +  TYNT+ 
Sbjct: 420 AKHMFDLMA-----SPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLI 474

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE---- 311
             + +    + A+++  EM  +GV P+  TC I++ G+C+  K++EAL     ++     
Sbjct: 475 HGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKID 534

Query: 312 -------------------------------YGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
                                          +GV P++  +N++I GF         + +
Sbjct: 535 LDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVL 594

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
              MK+    PD  TY+T++     AG +DK  E+  +M   G   DA    +  +   R
Sbjct: 595 FHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMAEEIICR 654

Query: 401 EQEPEKAEELL 411
             + E  E  L
Sbjct: 655 VSDEEIIENYL 665



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 91/381 (23%), Positives = 179/381 (46%), Gaps = 20/381 (5%)

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
           ++++A+D F  M  S    T    N +I  +    +P+ ++ L   M     +  N+ ++
Sbjct: 86  SLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIR-RIPLNIYSF 144

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT----------IATAYAQNG---E 263
           N+L++ +C+   ++ + +   K+   G +PDVVT+NT          I+ A A  G   E
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204

Query: 264 ADQAEEVIV--EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
               E V +  +M   G+ P   T   +I+G C EG++ EA      M   G+H ++V +
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
             ++ G  ++ D      +L+ M+E  + PDV+ YS I++     G     + +F +M +
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            GI P+   Y+ +  G+        A+ LL  MIE   +P+V+ F  +IS    +G +  
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A ++ D+M    + P+  T+ ++++G+ +  +   A+ +  +M +    P   TF  + +
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIID 440

Query: 502 ARRATGLTKEAKRILSKIKNK 522
                    E  ++L +I  +
Sbjct: 441 VYCRAKRVDEGMQLLREISRR 461



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 137/314 (43%), Gaps = 21/314 (6%)

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           K++ +A +    M  S      V  N +   + +    D A  +  +ME   +  N  + 
Sbjct: 85  KSLDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSF 144

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL--- 343
            I+I  +C   K+  +L     + + G  P++V FN L+ G       D + E LAL   
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCL---EDRISEALALFGY 201

Query: 344 ---------------MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
                          M E  + P VIT++T++N     G + +   + + M   G+  D 
Sbjct: 202 MVETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDV 261

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y  +  G  +  + + A  LL  M E+   P+VVI++ II   C DG    A  +F +
Sbjct: 262 VTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSE 321

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M E G++PN+ T+  ++ G+    +   A+ +L+ M    ++P   TF  L  A    G 
Sbjct: 322 MLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK 381

Query: 509 TKEAKRILSKIKNK 522
             EA+++  ++ ++
Sbjct: 382 LFEAEKLCDEMLHR 395


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 211/406 (51%), Gaps = 6/406 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++L ERG+ ++A ++ ++++  G  P +VTY  LL A    + +     ++  +   G
Sbjct: 13  LIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEG 72

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+++ +N +++     G++++A++    +   G  P+T  YNT++KG   A +  ++ 
Sbjct: 73  CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDAD 132

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+  M RE N  PN  T+NV++ + C +  + +A  ++ KM+  G   ++VTYN I   
Sbjct: 133 ELVTEMLRE-NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIING 191

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D A  ++ +M+  G +P+  T   ++ G C   +  +A      M + G  P+
Sbjct: 192 LCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMTQNGCLPD 251

Query: 318 LVIFNLLIKGFV--EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            V FN LI GF+  + +  D + EV   M +    P+ ITYSTI++  + A  +D+  E+
Sbjct: 252 NVTFNTLI-GFLCQKGLMVDAI-EVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALEL 309

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F++MG  G  PD   Y +LA+    +   E+A + +  + +SG  P+ V++  I+ G C 
Sbjct: 310 FNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCR 368

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +G  + AI++   M   G  P+  T+  L+ G +       A E+L
Sbjct: 369 NGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 414



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 196/418 (46%), Gaps = 35/418 (8%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P++  +N +I+   E G + +A+     M   G  P   TYN L++         ++++L
Sbjct: 5   PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           +DLM  EG   PN  TYNVL+   C E ++ +A  ++  + + G KP  V YNT+     
Sbjct: 65  IDLMRAEG-CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLC 123

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
                  A+E++ EM      PN  T  ++I   C++G +++A++    M ++G   N+V
Sbjct: 124 SAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIV 183

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            +N +I G  E  + DG   +L+ MK +   PD++TY+T++    +A      +E+ D+M
Sbjct: 184 TYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNM 243

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            + G  PD   ++ L     ++     A E+   M + G  PN + ++TIISG      +
Sbjct: 244 TQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKL 303

Query: 440 DRAIEVFDKM----------------C------------------EHGVSPNLKTFETLM 465
           D+A+E+F++M                C                  + G+SP+   +  ++
Sbjct: 304 DQALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAIL 363

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            G     +   A +I+  M + G  P   T+++L E     G   EA+ +L K+ +++
Sbjct: 364 LGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRD 421



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 154/348 (44%), Gaps = 36/348 (10%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V+PN  TYN L+   C    + +A +V+  M   G  PDVVTYN +  A  +     QA 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           E+I  M   G  PN  T  +++ G C EG + +AL   R +  +G  P+ V +N ++KG 
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 329 VEIMDRDGVDEVLALMKEFRVNP-----------------------------------DV 353
                    DE++  M      P                                   ++
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           +TY+ I+N       +D    +   M   G KPD   Y+ L KG         AEEL+  
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M ++G  P+ V F T+I   C  G M  AIEVF +M + G +PN  T+ T++ G ++A +
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             +A E+   M   G +P K  + LLAE        +EA + + K+++
Sbjct: 303 LDQALELFNEMGHKGFNPDK-IYQLLAECLNDDDTIEEAIQTVRKLQD 349



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 78/273 (28%), Positives = 135/273 (49%), Gaps = 8/273 (2%)

Query: 64  MNKESCRT-VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+K  C   + +   ++N L E+     A  + + +   G KP +VTY TLL  L    R
Sbjct: 173 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAR 232

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +     +M  + +NG  PD++ FN +I    + G M +A++ F +M + G TP + TY+T
Sbjct: 233 WVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYST 292

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G   A K +++++L + M  +G   P+ + Y +L     ++  I EA   + K+  S
Sbjct: 293 IISGLAKATKLDQALELFNEMGHKG-FNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDS 350

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P  V YN I     +NG+ + A +++  M  +G  P+  T  I+I G   EG + EA
Sbjct: 351 GISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEA 410

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
                 +         V+ N LIK    ++D++
Sbjct: 411 RELLIKLCSRD-----VLVNSLIKSEALLLDQN 438



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 71/282 (25%), Positives = 129/282 (45%)

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++P+  TYN +     + G+   A  V+ +M   G  P+  T  I++   CK    ++A+
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M+  G  PN V +N+L+ G     D D   E+L  +      P  + Y+T++   
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
            +A       E+  +M +    P+   ++++     R+   ++A +LL  M + G   N+
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           V +  II+G C   ++D A+ +  KM  +G  P++ T+ TL+ G   A +   AEE++  
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
           M   G  P   TF  L       GL  +A  +  ++ +K  T
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCT 284


>gi|414875981|tpg|DAA53112.1| TPA: hypothetical protein ZEAMMB73_920038 [Zea mays]
          Length = 574

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 208/426 (48%), Gaps = 10/426 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGG----HKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           L+ +L    +P  A   F  L+ G     ++PS  +   LLAAL    R +         
Sbjct: 122 LVLALARASQPLAAYEAF--LLAGADCPRYRPSAFSVNALLAALVRADRVDLADRAFRAA 179

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY---GIA 190
               + PD   FN VI+ F ++G + +A D    +   G+ P+ +TYNTLI GY   G  
Sbjct: 180 LRRRVSPDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQV 239

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK      LL  M + G + P++ T+NVL+  +C E NIT A  V  +M   G+  +VVT
Sbjct: 240 GKMYHVDALLKEMIQAG-ISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVT 298

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++ +   + G+ + + +++ EME  G+     T   +++G+CK+G + EA  +   + 
Sbjct: 299 YNSLVSGLCREGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIA 358

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G+ PN++ +N L+ G+  +            M    ++P+V TY+ ++  ++T+    
Sbjct: 359 QRGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWR 418

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               + D+M + G+K D   Y++L      + E  KA +LL  M+E G  P  V + TII
Sbjct: 419 SVSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTII 478

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+C  G    A E+  +M +     N+ T+   +  + +  +   A  +L  M   G+ 
Sbjct: 479 NGFCEKGDAQGAHEIRLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLV 538

Query: 491 PQKSTF 496
           P + T+
Sbjct: 539 PNRITY 544



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 99/398 (24%), Positives = 185/398 (46%), Gaps = 60/398 (15%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH---SIMSQVE 134
           +++   + G+ ++A  +  N+   G  PS+ TY TL+     + +   ++   +++ ++ 
Sbjct: 194 VISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMI 253

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           + G+ PD + FN +IN + +  N+  A+  F +M++ G+     TYN+L+ G    GK E
Sbjct: 254 QAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVE 313

Query: 195 ESVKLLDLMSREG----------------------------------NVKPNLRTYNVLV 220
           +S+KL++ M   G                                   +KPN+ TYN LV
Sbjct: 314 DSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLV 373

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
             +     + EA      MA  G+ P+V TYN + T +  + +      ++ EM+  GV+
Sbjct: 374 DGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVK 433

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
            +  T  ++I   C +G++++A++    M E G+ P  V +N +I GF E  D  G  E+
Sbjct: 434 ADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEI 493

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
              M++ +   +V+TY+  +  +   G MD+   + ++M + G+ P+   Y I+  G   
Sbjct: 494 RLRMEKRKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSG--- 550

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
                        MIE G+ P+       ISG+ +D S
Sbjct: 551 -------------MIEKGYVPD-------ISGYAADVS 568



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 162/326 (49%), Gaps = 12/326 (3%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ-- 266
           V P+L T+N+++  +C    + +A +V   ++A G+ P V TYNT+   Y + G+  +  
Sbjct: 184 VSPDLFTFNIVISGFCKTGQLRKAGDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMY 243

Query: 267 -AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
             + ++ EM   G+ P+  T  ++I+GYCKE  I  A++  + M++ G+  N+V +N L+
Sbjct: 244 HVDALLKEMIQAGISPDVVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLV 303

Query: 326 KGFVEIMDRDG-VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
            G      R+G V++ + L   M+E  +   + T ++++N +   G M + +   D + +
Sbjct: 304 SGLC----REGKVEDSIKLVEEMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQ 359

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G+KP+   Y+ L  GY R  + ++A      M   G  PNV  +  +I+G+ +      
Sbjct: 360 RGMKPNVITYNTLVDGYRRLGKMKEAAAAKDAMAGKGISPNVKTYNCLITGFTTSRDWRS 419

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
              + D+M E GV  ++ T+  L+       +  +A ++L  M   G+ P+   +  +  
Sbjct: 420 VSGLLDEMKEKGVKADVVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIIN 479

Query: 502 ARRATGLTKEAKRILSKI-KNKERTN 526
                G  + A  I  ++ K K+R N
Sbjct: 480 GFCEKGDAQGAHEIRLRMEKRKKRAN 505



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/310 (27%), Positives = 152/310 (49%), Gaps = 1/310 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N   +      A  +F  + + G   ++VTY +L++ L  + +      ++ 
Sbjct: 261 VVTFNVLINGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVE 320

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++EE G+       N+V+N F + G M EA      + + G+ P   TYNTL+ GY   G
Sbjct: 321 EMEELGLACILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLG 380

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E+    D M+ +G + PN++TYN L+  +   ++      ++ +M   G+K DVVTY
Sbjct: 381 KMKEAAAAKDAMAGKG-ISPNVKTYNCLITGFTTSRDWRSVSGLLDEMKEKGVKADVVTY 439

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  A    GE  +A +++ EM   G++P       II+G+C++G  + A      M++
Sbjct: 440 NVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHVAYNTIINGFCEKGDAQGAHEIRLRMEK 499

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
                N+V +N+ +K F ++   D  + VL  M E  + P+ ITY  I +     G++  
Sbjct: 500 RKKRANVVTYNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPD 559

Query: 372 CKEIFDDMGK 381
                 D+ K
Sbjct: 560 ISGYAADVSK 569



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/279 (25%), Positives = 130/279 (46%), Gaps = 10/279 (3%)

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           +P   + N +  A  +    D A+          V P+  T  I+ISG+CK G++++A  
Sbjct: 150 RPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGD 209

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFV---EIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
            A+ +  +GV P++  +N LI G+    ++     VD +L  M +  ++PDV+T++ ++N
Sbjct: 210 VAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLIN 269

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +     +    ++F +M + GI  +   Y+ L  G  RE + E + +L+  M E G   
Sbjct: 270 GYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLAC 329

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            +    ++++G+C  G M  A    D + + G+ PN+ T+ TL+ GY    +   A    
Sbjct: 330 ILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAK 389

Query: 482 QIMKAFGVHPQKSTFLLLAEA-------RRATGLTKEAK 513
             M   G+ P   T+  L          R  +GL  E K
Sbjct: 390 DAMAGKGISPNVKTYNCLITGFTTSRDWRSVSGLLDEMK 428



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 155/314 (49%), Gaps = 5/314 (1%)

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +P+  + N L+ A      +  A           + PD+ T+N + + + + G+  +A +
Sbjct: 150 RPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKAGD 209

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY---GVHPNLVIFNLLIK 326
           V   +   GV P+  T   +I GYCK G++ +       +KE    G+ P++V FN+LI 
Sbjct: 210 VAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVLIN 269

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           G+ +  +     +V   M++  +  +V+TY+++++     G ++   ++ ++M + G+  
Sbjct: 270 GYCKEPNITAAIKVFQEMRQQGIPANVVTYNSLVSGLCREGKVEDSIKLVEEMEELGLAC 329

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
                + +  G+ ++    +AE  +  + + G  PNV+ + T++ G+   G M  A    
Sbjct: 330 ILSTMNSVLNGFCKKGMMVEAEGWVDGIAQRGMKPNVITYNTLVDGYRRLGKMKEAAAAK 389

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRA-EEILQIMKAFGVHPQKSTFLLLAEARRA 505
           D M   G+SPN+KT+  L+ G++ +R  WR+   +L  MK  GV     T+ +L  A   
Sbjct: 390 DAMAGKGISPNVKTYNCLITGFTTSRD-WRSVSGLLDEMKEKGVKADVVTYNVLIGALCC 448

Query: 506 TGLTKEAKRILSKI 519
            G  ++A ++L ++
Sbjct: 449 KGEVRKAVKLLDEM 462



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/184 (23%), Positives = 82/184 (44%), Gaps = 9/184 (4%)

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
           R  P   + + ++ A   A  +D     F    +  + PD   ++I+  G+ +  +  KA
Sbjct: 148 RYRPSAFSVNALLAALVRADRVDLADRAFRAALRRRVSPDLFTFNIVISGFCKTGQLRKA 207

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV---FDKMCEHGVSPNLKTFETL 464
            ++   +   G  P+V  + T+I G+C  G + +   V     +M + G+SP++ TF  L
Sbjct: 208 GDVAKNISAWGVAPSVATYNTLIDGYCKRGQVGKMYHVDALLKEMIQAGISPDVVTFNVL 267

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
           + GY +      A ++ Q M+  G+     T+  L      +GL +E K +   IK  E 
Sbjct: 268 INGYCKEPNITAAIKVFQEMRQQGIPANVVTYNSL-----VSGLCREGK-VEDSIKLVEE 321

Query: 525 TNEM 528
             E+
Sbjct: 322 MEEL 325


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 122/498 (24%), Positives = 240/498 (48%), Gaps = 23/498 (4%)

Query: 64  MNKESCRT-VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M++  CR  V + T L++ L +  +  EA+A+   ++  G  P++VTY  L+  L  + R
Sbjct: 187 MSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGR 246

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F+ +  ++ ++E     PD   +  V++   + G +        +    G+     TYN 
Sbjct: 247 FDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNA 306

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY   G  + ++ +L LM R   V P ++T+N ++  +C    + +A   + +MA +
Sbjct: 307 LINGYCKGGDMKAALDVLQLMKRN-RVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGA 365

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P+ VT+N++ +     GE   A  ++  ME  GV P+ +T  I I   C EG+++EA
Sbjct: 366 GLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEA 425

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 +   G+  + VI+  L+ G+ ++ D D    ++  M      PDV TY+T+++ 
Sbjct: 426 HSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDG 485

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
                 +D+  ++ D M K GI+P    ++IL K  + +++   A ++   MI SG  P+
Sbjct: 486 LCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPD 545

Query: 423 VVIFTTIIS-GWCSDGSMDRAIEV-FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
              +T  IS  W    + +  I++   +M E GV P+++T+  ++  Y +A    +A   
Sbjct: 546 KQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFA 605

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEED---IPVE 537
              M +  + P  +T+ +L                L+ + NK+ ++  + E+    + V 
Sbjct: 606 HVKMLSVPIDPDCTTYSIL----------------LNYMCNKDDSDAFDNEKIWKMVDVR 649

Query: 538 SLERLYHKEATTASYPNL 555
           +L+ L+ +   + + P +
Sbjct: 650 NLQELFEQMCESDAAPGI 667



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/468 (26%), Positives = 211/468 (45%), Gaps = 41/468 (8%)

Query: 72  VRSMTKLMNSLIERGK--PQEAQ--AIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           VRS    + +   RG   P+ A   A F  +++ G  P+  TY TL+ A           
Sbjct: 51  VRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADAR 110

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLIKG 186
           + + ++ E G+ PD+  +N ++     +G +  A   F +M +  G      +Y  LIKG
Sbjct: 111 AALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKG 170

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
              AG+ +++ ++   MSR G  +P + TY VL+   C  + + EA  ++ +M   G+ P
Sbjct: 171 LCAAGRIDDACRVFAKMSR-GWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVP 229

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           +VVTYN +     Q G  D   +++ +ME     P+  T   ++ G CK GK+    +  
Sbjct: 230 NVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVL 289

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
                 GV   ++ +N LI G+ +  D     +VL LMK  RVNP V T++ +++ +   
Sbjct: 290 HEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCG 349

Query: 367 GFMDK---------------------------CK--------EIFDDMGKAGIKPDAHAY 391
           G + K                           C          + D M + G+ PD   Y
Sbjct: 350 GKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTY 409

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           +I       E + E+A  L   +   G   + VI+T+++ G+C  G +D A  + +KM  
Sbjct: 410 AIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMAS 469

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
               P++ T+ TL+ G  + ++  RA ++L  MK  G+ P   TF +L
Sbjct: 470 ENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNIL 517



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 188/403 (46%), Gaps = 1/403 (0%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           +YT L+  L    R +    + +++      P    +  +++   +   + EA     +M
Sbjct: 163 SYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEM 222

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
              G+ P   TYN LI G    G+ ++  KLL+ M  + +  P+  TY  +V   C    
Sbjct: 223 VNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRH-SPDCWTYTQVVHGLCKHGK 281

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           +     V+H+    G+  +V+TYN +   Y + G+   A +V+  M+ N V P  +T   
Sbjct: 282 VGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNE 341

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +I G+C  GK+ +A+ F   M   G+ PN V FN LI G   + +R     +L LM+E+ 
Sbjct: 342 VIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYG 401

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           V PD  TY+  ++A    G +++   +F  +   GIK     Y+ L  GY +  + + A 
Sbjct: 402 VLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAF 461

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            L+  M      P+V  + T+I G C    +DRAI++ DKM + G+ P   TF  L+   
Sbjct: 462 GLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQM 521

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
              ++   A ++ + M + G  P K T+ L        G TKE
Sbjct: 522 LWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKE 564



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 125/537 (23%), Positives = 209/537 (38%), Gaps = 89/537 (16%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T++++ L + GK      + +  I  G    ++TY  L+          +   ++  +
Sbjct: 268 TYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLM 327

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + N ++P    FN VI+ F   G + +AM    +M  +GL+P T T+N+LI G    G+ 
Sbjct: 328 KRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGER 387

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + +++LLDLM   G V P+ +TY + + A C+E  + EA ++   +   G+K   V Y +
Sbjct: 388 KIALRLLDLMEEYG-VLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTS 446

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y Q G+ D A  ++ +M      P+  T   +I G CK  ++  A+     MK+ G
Sbjct: 447 LVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQG 506

Query: 314 VHPNLVIFNLLIKGFV------------EIMDRDG------------------------- 336
           + P    FN+LIK  +            E M   G                         
Sbjct: 507 IEPTTCTFNILIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEEN 566

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
           +D  +  M E  V PDV TY+ I+ A+  AG  +K       M    I PD   YSIL  
Sbjct: 567 IDMAVVEMHEAGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLN 626

Query: 397 GYVREQEPEKA---------------EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            Y+  ++   A               +EL   M ES   P +  +  ++ G C+   ++ 
Sbjct: 627 -YMCNKDDSDAFDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEE 685

Query: 442 -----------------------------------AIEVFDKMCEHGVSPNLKTFETLMW 466
                                              A E F  M      P LK+   L+ 
Sbjct: 686 VEWLLLKMQGNSILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLS 745

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           G  ++     A  I   M   G +  +  + LL +     G       +LS +  K+
Sbjct: 746 GLCDSGDHGMAVSIFSDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKK 802



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 174/391 (44%), Gaps = 7/391 (1%)

Query: 138 MDPDSI-FFNAVINAFSESGN----MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +DP  +   NA + A+S  G+    +   + +F  M +SG  P   TYNTLI  +     
Sbjct: 46  LDPSDVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAH-CKLA 104

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTY 251
                +   +  RE  + P+  TYN L+   C    +  A  +  +M    G   D  +Y
Sbjct: 105 LLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSY 164

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +       G  D A  V  +M     +P   T  +++ G CK  ++ EA      M  
Sbjct: 165 TILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVN 224

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV PN+V +N LI G  +    D V ++L  M+  R +PD  TY+ +++     G +  
Sbjct: 225 KGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGH 284

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++  +    G+  +   Y+ L  GY +  + + A ++L  M  +  +P V  F  +I 
Sbjct: 285 GAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIH 344

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C  G + +A+    +M   G+SPN  TF +L+ G     +   A  +L +M+ +GV P
Sbjct: 345 GFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLP 404

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            + T+ +  +A    G  +EA  + S +  K
Sbjct: 405 DRQTYAIFIDALCDEGQLEEAHSLFSCLPMK 435



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 74/355 (20%), Positives = 144/355 (40%), Gaps = 28/355 (7%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  E+C   V +   L++ L +  +   A  + + + + G +P+  T+  L+  +   K+
Sbjct: 467 MASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIKQMLWDKK 526

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINA-FSESGNMEEAMD-TFWKMKESGLTPTTSTY 180
                 +  Q+  +G  PD   +   I+  + E    EE +D    +M E+G+ P   TY
Sbjct: 527 HADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHEAGVFPDVETY 586

Query: 181 NTLIKGYGIAGKPEES----VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN-- 234
           N +IK Y  AG  E++    VK+L +      + P+  TY++L+   CN K+ ++A++  
Sbjct: 587 NAIIKAYVDAGLKEKAFFAHVKMLSV-----PIDPDCTTYSILLNYMCN-KDDSDAFDNE 640

Query: 235 -------------VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
                        +  +M  S   P + TY  +          ++ E ++++M+ N +  
Sbjct: 641 KIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILL 700

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +      ++  YC     +EA    R+M      P L    LL+ G  +  D      + 
Sbjct: 701 DEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIF 760

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
           + M     N D + +  +++     G    C E+   M           Y+ L +
Sbjct: 761 SDMLGLGYNYDEVVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLVR 815


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 209/422 (49%), Gaps = 1/422 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+  +   + + L   G KP    Y  ++  L           ++  + + G+ PD++ +
Sbjct: 291 GELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVY 350

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             VI+ F + GN+  A   F +M+   + P   TY ++I G   +GK  E+ ++ + M  
Sbjct: 351 TTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLV 410

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G ++P+  TY  L+  +C    + EA++V ++M   G+ P+VVTY  +A    +NGE D
Sbjct: 411 KG-LEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEID 469

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A E++ EM   G+QPN  T   I++G CK G I++ ++    M   G +P+ + +  L+
Sbjct: 470 VANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLM 529

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
             + ++ +     E+L +M   R+ P ++T++ +MN +  +G ++  + + + M + GI 
Sbjct: 530 DAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIM 589

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P+A  ++ L K Y  +       E+   M + G  P+   +  +I G C   +M  A  +
Sbjct: 590 PNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFL 649

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
             +M E G S    T++ L+ G+ + ++   A ++ + M+  G+  +K  + +  +    
Sbjct: 650 HKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYE 709

Query: 506 TG 507
            G
Sbjct: 710 EG 711



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 224/475 (47%), Gaps = 17/475 (3%)

Query: 63  CMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           C N  SC  V      ++ L + GK +EA  +   + + G+ P +V+Y  +++       
Sbjct: 239 CWNTVSCNIV------LHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGE 292

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            + +  ++ +++  G+ PD   +N +I    ++G + EA      M++ G+ P    Y T
Sbjct: 293 LDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTT 352

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G+   G    + KL D M R+  + P++ TY  ++   C    + EA  + ++M   
Sbjct: 353 VISGFCKLGNVSAACKLFDEMRRK-KIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVK 411

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G++PD VTY  +   Y + GE  +A  V  +M   G+ PN  T   +  G CK G+I  A
Sbjct: 412 GLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVA 471

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV---NPDVITYSTI 359
                 M   G+ PN+  +N ++ G  +I     +++ + LM+E  +    PD ITY+T+
Sbjct: 472 NELLHEMSRKGLQPNVYTYNTIVNGLCKI---GNIEQTVKLMEEMDLAGFYPDTITYTTL 528

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           M+A+   G M K  E+   M    ++P    +++L  G+      E  E L+  M+E G 
Sbjct: 529 MDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGI 588

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            PN   F +++  +C   +M    E++  M + GV P+  T+  L+ G+ +AR    A  
Sbjct: 589 MPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWF 648

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI 534
           + + M   G     +T+  L           EA+++  ++    R + + AE+DI
Sbjct: 649 LHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEM----RKHGLVAEKDI 699



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 204/422 (48%), Gaps = 1/422 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A  +F    E G   + V+   +L  L    +    H+++ Q+ + G  PD + +  V++
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVS 285

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            +   G +++ +    ++K  GL P    YN +I      G+  E+ +LL  M + G V 
Sbjct: 286 GYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWG-VF 344

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P+   Y  ++  +C   N++ A  +  +M    + PD+VTY ++     ++G+  +A E+
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             EM   G++P+  T   +I GYCK G++KEA      M + G+ PN+V +  L  G  +
Sbjct: 405 FNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
             + D  +E+L  M    + P+V TY+TI+N     G +++  ++ ++M  AG  PD   
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTIT 524

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ L   Y +  E  KA ELL  M+     P +V F  +++G+C  G ++    + + M 
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWML 584

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E G+ PN  TF +LM  Y          EI + M   GV P  +T+ +L +        K
Sbjct: 585 EKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMK 644

Query: 511 EA 512
           EA
Sbjct: 645 EA 646



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/387 (26%), Positives = 196/387 (50%), Gaps = 14/387 (3%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI-------KGYGIAGKPEE 195
           + F+       E+G + EA   F K+   G+  +  + N  +       +G  IA K  E
Sbjct: 172 LVFDLYFQVLVENGFVLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFE 231

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
                     E  V  N  + N+++   C    + EA N++ +M   G  PDVV+Y  + 
Sbjct: 232 EFP-------ELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVV 284

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           + Y + GE D+  +++ E++  G++P+      II   CK G++ EA +  R M+++GV 
Sbjct: 285 SGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVF 344

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+ V++  +I GF ++ +     ++   M+  ++ PD++TY+++++    +G M + +E+
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F++M   G++PD   Y+ L  GY +  E ++A  +   M++ G  PNVV +T +  G C 
Sbjct: 405 FNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCK 464

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G +D A E+  +M   G+ PN+ T+ T++ G  +     +  ++++ M   G +P   T
Sbjct: 465 NGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTIT 524

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNK 522
           +  L +A    G   +A  +L  + NK
Sbjct: 525 YTTLMDAYCKMGEMAKAHELLRIMLNK 551



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 183/360 (50%), Gaps = 9/360 (2%)

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A+  F +  E G+   T + N ++      GK  E+  LL  M+  GN  P++ +Y V+V
Sbjct: 226 AVKVFEEFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNF-PDVVSYGVVV 284

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
             +C    + +   ++ ++   G+KPD   YN I     +NGE  +AE+++  M   GV 
Sbjct: 285 SGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVF 344

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE----IMDRDG 336
           P+      +ISG+CK G +  A +    M+   + P++V +  +I G  +    +  R+ 
Sbjct: 345 PDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREM 404

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            +E+L    E    PD +TY+ +++ +  AG M +   + + M + G+ P+   Y+ LA 
Sbjct: 405 FNEMLVKGLE----PDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALAD 460

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  +  E + A ELL  M   G  PNV  + TI++G C  G++++ +++ ++M   G  P
Sbjct: 461 GLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYP 520

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +  T+ TLM  Y +  +  +A E+L+IM    + P   TF +L      +G+ ++ +R++
Sbjct: 521 DTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLI 580



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 133/277 (48%), Gaps = 6/277 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L + L + G+   A  + + +   G +P++ TY T++  L           +M 
Sbjct: 452 VVTYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLME 511

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++  G  PD+I +  +++A+ + G M +A +    M    L PT  T+N L+ G+ ++G
Sbjct: 512 EMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSG 571

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E+  +L++ M  +G + PN  T+N L++ +C + N+     +   M   G+ PD  TY
Sbjct: 572 MLEDGERLIEWMLEKG-IMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTY 630

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   + +     +A  +  EM   G      T   +I G+ K  K  EA +    M++
Sbjct: 631 NILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRK 690

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEV-LALMKEF 347
           +G+     I+++    FV++   +G  E+ L L  EF
Sbjct: 691 HGLVAEKDIYDI----FVDVNYEEGNWEITLELCDEF 723



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 142/298 (47%), Gaps = 36/298 (12%)

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ-AEEVIVEMEHNGVQPNGRTCG 287
           + EA  + HK+   G+   V + N   +  + N E  + A +V  E    GV  N  +C 
Sbjct: 187 VLEAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNTVSCN 246

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           I++   C+ GK++EA                   NLL    V++ DR             
Sbjct: 247 IVLHCLCQLGKVREA------------------HNLL----VQMTDRGNF---------- 274

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
              PDV++Y  +++ +   G +DK  ++ D++   G+KPD + Y+ +     +  E  +A
Sbjct: 275 ---PDVVSYGVVVSGYCRIGELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEA 331

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           E+LL  M + G  P+ V++TT+ISG+C  G++  A ++FD+M    + P++ T+ +++ G
Sbjct: 332 EQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHG 391

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
             ++ +   A E+   M   G+ P + T+  L +     G  KEA  + +++  K  T
Sbjct: 392 ICKSGKMVEAREMFNEMLVKGLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLT 449


>gi|356519580|ref|XP_003528450.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Glycine max]
          Length = 1012

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 232/489 (47%), Gaps = 17/489 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N+L   G  +EAQ++  +++  G    +  Y++L+     +   ++  S++ ++ E  
Sbjct: 487 LLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKD 546

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M  D + +NA+       G  E     F +M E GLTP   TYN+++  Y I GK E ++
Sbjct: 547 MQFDVVAYNALTKGLLRLGKYEPK-SVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENAL 605

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ M   G V PN+ TYN+L+   C    I +  +V+H+M A G  P  + +  +  A
Sbjct: 606 DLLNEMKSYG-VMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKA 664

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y+++ +AD   ++  ++   G+  N      +I+  C+ G  K+A      M   G+  +
Sbjct: 665 YSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISAD 724

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N LI+G+      +      + M    ++P++ TY+ ++   ST G M    ++  
Sbjct: 725 IVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYNALLEGLSTNGLMRDADKLVS 784

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M + G+ P+A  Y+IL  G+ R      + +L   MI  GF P    +  +I  +   G
Sbjct: 785 EMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITKGFIPTTGTYNVLIQDYAKAG 844

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR-QPW-----------RAEEILQIMK 485
            M +A E+ ++M   G  PN  T++ L+ G+ +   QP             A+++L+ M 
Sbjct: 845 KMRQARELLNEMLTRGRIPNSSTYDVLICGWCKLSCQPEMDRLLKLSYQNEAKKLLREMC 904

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP---VESLERL 542
             G  P +ST + ++    A G   +AKR+L  +    R+   EA E I       + R 
Sbjct: 905 EKGHVPSESTLMYISSNFSAPGKRDDAKRLLKTVIGLYRSTAEEATEKIAQFCFAQILRF 964

Query: 543 YHKEATTAS 551
              + T AS
Sbjct: 965 MFAQVTEAS 973



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 226/453 (49%), Gaps = 12/453 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV + T L+ +  +     +  +++  +I  G  P +VT +++L  L    +      ++
Sbjct: 235 TVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLL 294

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+DP+ + +  +I+A  +SG + EA +   +M   G++       T++ G   A
Sbjct: 295 REMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKA 354

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK +E+ ++   + +  N+ PN  TY  L+   C   ++  A  V+ KM    + P+VVT
Sbjct: 355 GKSKEAEEMFQTILKL-NLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVT 413

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +++I   YA+ G  ++A EV+ +M    + PN     I++ GY + G+ + A  F + MK
Sbjct: 414 FSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMK 473

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
            +G+  N +IF++L+     +    G+ E  +L+K+     +  DV  YS++M+ +   G
Sbjct: 474 SWGLEENNIIFDILLN---NLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEG 530

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
                  +  +M +  ++ D  AY+ L KG +R  + E  + +   MIE G  P+ V + 
Sbjct: 531 NESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYE-PKSVFSRMIELGLTPDCVTYN 589

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           ++++ +   G  + A+++ ++M  +GV PN+ T+  L+ G  +     +   +L  M A 
Sbjct: 590 SVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEMLAV 649

Query: 488 GVHPQK--STFLLLA--EARRATGLTKEAKRIL 516
           G  P      FLL A   +R+A  + +  K+++
Sbjct: 650 GYVPTPIIHKFLLKAYSRSRKADAILQIHKKLV 682



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/517 (22%), Positives = 221/517 (42%), Gaps = 68/517 (13%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +M+ L + GK +EA+ +F  +++    P+ VTYT LL             +++ ++E+
Sbjct: 345 TTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEK 404

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + P+ + F+++IN +++ G + +A++   KM +  + P    Y  L+ GY   G+ E 
Sbjct: 405 EHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEA 464

Query: 196 SVK-------------------LLDLMSREGNVKP---------------NLRTYNVLVR 221
           +                     LL+ + R G +K                ++  Y+ L+ 
Sbjct: 465 AAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMD 524

Query: 222 AWCNEKNITEAWNVMHKMAAS----------------------------------GMKPD 247
            +  E N + A +V+ +M                                     G+ PD
Sbjct: 525 GYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEPKSVFSRMIELGLTPD 584

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
            VTYN++   Y   G+ + A +++ EM+  GV PN  T  I+I G CK G I++ +    
Sbjct: 585 CVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLH 644

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M   G  P  +I   L+K +      D + ++   + +  +N + + Y+T++      G
Sbjct: 645 EMLAVGYVPTPIIHKFLLKAYSRSRKADAILQIHKKLVDMGLNLNQMVYNTLITVLCRLG 704

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
              K   +  +M   GI  D   Y+ L +GY      EKA      M+ SG  PN+  + 
Sbjct: 705 MTKKANVVLTEMVIKGISADIVTYNALIRGYCTGSHVEKAFNTYSQMLVSGISPNITTYN 764

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            ++ G  ++G M  A ++  +M E G+ PN  T+  L+ G+        + ++   M   
Sbjct: 765 ALLEGLSTNGLMRDADKLVSEMRERGLVPNATTYNILVSGHGRVGNKRDSIKLYCEMITK 824

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
           G  P   T+ +L +     G  ++A+ +L+++  + R
Sbjct: 825 GFIPTTGTYNVLIQDYAKAGKMRQARELLNEMLTRGR 861



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 128/526 (24%), Positives = 243/526 (46%), Gaps = 29/526 (5%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + ++  L   GK  EA  +   +   G  P+ V+YTT+++AL    R     +  S
Sbjct: 271 VVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQS 330

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+   G+  D +    +++   ++G  +EA + F  + +  L P   TY  L+ G+   G
Sbjct: 331 QMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVG 390

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E +  +L  M +E +V PN+ T++ ++  +  +  + +A  V+ KM    + P+V  Y
Sbjct: 391 DVEFAETVLQKMEKE-HVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVY 449

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +   Y + G+ + A     EM+  G++ N     I+++   + G +KEA    + +  
Sbjct: 450 AILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILS 509

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G++ ++  ++ L+ G+ +  +      V+  M E  +  DV+ Y+ +       G  + 
Sbjct: 510 KGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQFDVVAYNALTKGLLRLGKYEP 569

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            K +F  M + G+ PD   Y+ +   Y  + + E A +LL  M   G  PN+V +  +I 
Sbjct: 570 -KSVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLLNEMKSYGVMPNMVTYNILIG 628

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF---G 488
           G C  G++++ I V  +M   G  P     + L+  YS +R   +A+ ILQI K     G
Sbjct: 629 GLCKTGAIEKVISVLHEMLAVGYVPTPIIHKFLLKAYSRSR---KADAILQIHKKLVDMG 685

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLY----H 544
           ++  +  +  L       G+TK+A  +L+++  K  + ++     +   +L R Y    H
Sbjct: 686 LNLNQMVYNTLITVLCRLGMTKKANVVLTEMVIKGISADI-----VTYNALIRGYCTGSH 740

Query: 545 KEATTASYPNLLQ---IPNVVSSDQKGSAAALKKG---RMLLRDAD 584
            E    +Y  +L     PN+ + +      AL +G     L+RDAD
Sbjct: 741 VEKAFNTYSQMLVSGISPNITTYN------ALLEGLSTNGLMRDAD 780



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/439 (25%), Positives = 213/439 (48%), Gaps = 28/439 (6%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           VTY T++     +   +    ++S++ + G+  DS+  N ++  + + G ++ A      
Sbjct: 76  VTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYCQIGLVQYAEWIMGN 135

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           +   G+       NTL+ GY   G    ++ L++   + G VKP++ TYN LV A+C   
Sbjct: 136 LVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNG-VKPDIVTYNTLVNAFCKRG 194

Query: 228 NITEAWNVMHKMAA------SG---------------MKPDVVTYNTIATAYAQNGEADQ 266
           ++ +A +V++++        SG               ++P VVT+ T+  AY ++   D 
Sbjct: 195 DLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDD 254

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
              +  +M  +GV P+  TC  I+ G C+ GK+ EA    R M   G+ PN V +  +I 
Sbjct: 255 FFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIIS 314

Query: 327 GFVE---IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
             ++   +M+       + +     ++ D++  +T+M+    AG   + +E+F  + K  
Sbjct: 315 ALLKSGRVMEAFNHQSQMVVRG---ISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILKLN 371

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           + P+   Y+ L  G+ +  + E AE +L  M +    PNVV F++II+G+   G +++A+
Sbjct: 372 LVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNKAV 431

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           EV  KM +  + PN+  +  L+ GY    Q   A    + MK++G+      F +L    
Sbjct: 432 EVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLNNL 491

Query: 504 RATGLTKEAKRILSKIKNK 522
           + +G  KEA+ ++  I +K
Sbjct: 492 KRSGGMKEAQSLIKDILSK 510



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 199/443 (44%), Gaps = 28/443 (6%)

Query: 63  CMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           C +  +C        L+    + G  Q A+ I  NL+ GG     +   TL+        
Sbjct: 107 CFDSVTCNI------LVKGYCQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGL 160

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT------FWKMKESG---- 172
            +    ++    +NG+ PD + +N ++NAF + G++ +A         F +  ESG    
Sbjct: 161 VSRALDLVEDGWKNGVKPDIVTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLND 220

Query: 173 -----------LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
                      L PT  T+ TLI  Y      ++   L + M   G V P++ T + ++ 
Sbjct: 221 CGVETWDGLRDLQPTVVTWTTLIAAYCKHRGIDDFFSLYEQMIMSG-VMPDVVTCSSILY 279

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C    +TEA  ++ +M   G+ P+ V+Y TI +A  ++G   +A     +M   G+  
Sbjct: 280 GLCRHGKLTEAAMLLREMYNMGLDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISI 339

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +   C  ++ G  K GK KEA    +T+ +  + PN V +  L+ G  ++ D +  + VL
Sbjct: 340 DLVLCTTMMDGLFKAGKSKEAEEMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVL 399

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M++  V P+V+T+S+I+N ++  G ++K  E+   M +  I P+   Y+IL  GY R 
Sbjct: 400 QKMEKEHVLPNVVTFSSIINGYAKKGMLNKAVEVLRKMVQMNIMPNVFVYAILLDGYFRT 459

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            + E A      M   G   N +IF  +++     G M  A  +   +   G+  ++  +
Sbjct: 460 GQHEAAAGFYKEMKSWGLEENNIIFDILLNNLKRSGGMKEAQSLIKDILSKGIYLDVFNY 519

Query: 462 ETLMWGYSEARQPWRAEEILQIM 484
            +LM GY +      A  ++Q M
Sbjct: 520 SSLMDGYFKEGNESAALSVVQEM 542



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 120/518 (23%), Positives = 222/518 (42%), Gaps = 79/518 (15%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEG--------------------GHKPSLVTYTTLLAAL 117
           +M +L+  G P +A  + N L++G                    G KP +VTY TL+ A 
Sbjct: 132 IMGNLVGGGVPLDAIGL-NTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIVTYNTLVNAF 190

Query: 118 TIQKRFNSIHSIMSQV------EENG---------------MDPDSIFFNAVINAFSESG 156
             +       S+++++      +E+G               + P  + +  +I A+ +  
Sbjct: 191 CKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTTLIAAYCKHR 250

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            +++    + +M  SG+ P   T ++++ G    GK  E+  LL  M   G + PN  +Y
Sbjct: 251 GIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMG-LDPNHVSY 309

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
             ++ A      + EA+N   +M   G+  D+V   T+     + G++ +AEE+   +  
Sbjct: 310 TTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAEEMFQTILK 369

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
             + PN  T   ++ G+CK G ++ A    + M++  V PN+V F+ +I G+ +    + 
Sbjct: 370 LNLVPNCVTYTALLDGHCKVGDVEFAETVLQKMEKEHVLPNVVTFSSIINGYAKKGMLNK 429

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAW-------STAGFMDKCKE--------IFD---- 377
             EVL  M +  + P+V  Y+ +++ +       + AGF  + K         IFD    
Sbjct: 430 AVEVLRKMVQMNIMPNVFVYAILLDGYFRTGQHEAAAGFYKEMKSWGLEENNIIFDILLN 489

Query: 378 ----------------DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                           D+   GI  D   YS L  GY +E     A  ++  M E     
Sbjct: 490 NLKRSGGMKEAQSLIKDILSKGIYLDVFNYSSLMDGYFKEGNESAALSVVQEMTEKDMQF 549

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +VV +  +  G    G  +    VF +M E G++P+  T+ ++M  Y    +   A ++L
Sbjct: 550 DVVAYNALTKGLLRLGKYEPK-SVFSRMIELGLTPDCVTYNSVMNTYFIQGKTENALDLL 608

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             MK++GV P   T+ +L      TG  ++   +L ++
Sbjct: 609 NEMKSYGVMPNMVTYNILIGGLCKTGAIEKVISVLHEM 646



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 172/417 (41%), Gaps = 36/417 (8%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P    +N ++  F+ SG + +    + +M   G+ P   + N L+      G    ++  
Sbjct: 8   PSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGDLGLALGY 67

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           L       N   +  TYN +V  +C      + + ++ +M   G+  D VT N +   Y 
Sbjct: 68  LR------NSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGYC 121

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           Q G    AE ++  +   GV  +      ++ GYC+ G +  AL       + GV P++V
Sbjct: 122 QIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDIV 181

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFR---------------------VNPDVITYST 358
            +N L+  F +  D    + V+  +  FR                     + P V+T++T
Sbjct: 182 TYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWTT 241

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++ A+     +D    +++ M  +G+ PD    S +  G  R  +  +A  LL  M   G
Sbjct: 242 LIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNMG 301

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PN V +TTIIS     G +  A     +M   G+S +L    T+M G  +A +   AE
Sbjct: 302 LDPNHVSYTTIISALLKSGRVMEAFNHQSQMVVRGISIDLVLCTTMMDGLFKAGKSKEAE 361

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP 535
           E+ Q +    + P   T+  L +     G  + A+ +L K         ME E  +P
Sbjct: 362 EMFQTILKLNLVPNCVTYTALLDGHCKVGDVEFAETVLQK---------MEKEHVLP 409



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 69/325 (21%), Positives = 135/325 (41%), Gaps = 51/325 (15%)

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M A  + P +  +N +   +  +G   Q + +  EM   GV PN  +  +++   CK G 
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 299 IKEALRFART------------------------------MKEYGVHPNLVIFNLLIKGF 328
           +  AL + R                               M + GV  + V  N+L+KG+
Sbjct: 61  LGLALGYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGY 120

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +I      + ++  +    V  D I  +T+++ +   G + +  ++ +D  K G+KPD 
Sbjct: 121 CQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDI 180

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMI------ESG---------------FHPNVVIFT 427
             Y+ L   + +  +  KAE ++  ++      ESG                 P VV +T
Sbjct: 181 VTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWT 240

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T+I+ +C    +D    ++++M   GV P++ T  ++++G     +   A  +L+ M   
Sbjct: 241 TLIAAYCKHRGIDDFFSLYEQMIMSGVMPDVVTCSSILYGLCRHGKLTEAAMLLREMYNM 300

Query: 488 GVHPQKSTFLLLAEARRATGLTKEA 512
           G+ P   ++  +  A   +G   EA
Sbjct: 301 GLDPNHVSYTTIISALLKSGRVMEA 325



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 48/243 (19%), Positives = 100/243 (41%), Gaps = 30/243 (12%)

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL--------- 394
           M+   + P +  ++ ++  ++ +GF+ + K ++ +M   G+ P+  + ++L         
Sbjct: 1   MRALSLVPSLPLWNDLLYEFNASGFVSQVKVLYSEMVLCGVVPNVFSVNLLVHSLCKVGD 60

Query: 395 ---AKGYVREQE------------------PEKAEELLMTMIESGFHPNVVIFTTIISGW 433
              A GY+R                      ++   LL  M++ G   + V    ++ G+
Sbjct: 61  LGLALGYLRNSVFDHVTYNTVVWGFCKRGLADQGFGLLSEMVKKGVCFDSVTCNILVKGY 120

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G +  A  +   +   GV  +     TL+ GY E     RA ++++     GV P  
Sbjct: 121 CQIGLVQYAEWIMGNLVGGGVPLDAIGLNTLVDGYCEVGLVSRALDLVEDGWKNGVKPDI 180

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYP 553
            T+  L  A    G   +A+ ++++I    R +E     D  VE+ + L   + T  ++ 
Sbjct: 181 VTYNTLVNAFCKRGDLAKAESVVNEILGFRRDDESGVLNDCGVETWDGLRDLQPTVVTWT 240

Query: 554 NLL 556
            L+
Sbjct: 241 TLI 243


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/398 (28%), Positives = 202/398 (50%), Gaps = 12/398 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++       +  E   + + +I  G  P+ +TY  L+  L    R +   +++S
Sbjct: 280 VNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLS 339

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIA 190
           +V      P+ + FN ++N F  +G + EA    + KM  +G  P   T++TL+ G    
Sbjct: 340 KVP----GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKK 395

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    +++L++ M  +G  KPNL TY +L+  +C +  + EA  ++ +M   G   + V 
Sbjct: 396 GLFGSALELVNDMDAKG-CKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLNTVG 454

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN + +A  ++G+  +A ++  EM   G +P+  T   +I G C+  ++++AL   R M 
Sbjct: 455 YNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMV 514

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE--FRVNP-DVITYSTIMNAWSTAG 367
             GV  N V FN LI  F+    R  + E L L+ +  FR  P D ITY+ ++ A    G
Sbjct: 515 LEGVIANSVTFNTLIHAFLR---RGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTG 571

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            ++K   +F++M + G+ P     +IL  G+    +   A E +  MI  GF P++V + 
Sbjct: 572 AVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYN 631

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           ++I+G C  G +  A+ +F+K+   G+ P+  T+ TL+
Sbjct: 632 SLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLI 669



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 221/488 (45%), Gaps = 45/488 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           + RS   +++ L+    P  A  +F +++  G  P+  T+  ++ AL +    ++   ++
Sbjct: 174 SFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLL 233

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + ++G  P+S+ +  +I+A S+   ++EA+    +M   G  P  +T+NT+I G+   
Sbjct: 234 RDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRL 293

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +  E  KL+D M  +G   PN  TY  L+   C    I EA  ++ K+      P+VV 
Sbjct: 294 NRVLEGAKLVDRMILKG-FTPNDMTYGYLMHGLCKTCRIDEAQALLSKVPG----PNVVH 348

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +NT+   + +NG  ++A   + + M +NG  P+  T   +++G CK+G    AL     M
Sbjct: 349 FNTLVNGFVRNGRLNEATAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDM 408

Query: 310 KEYGVHPNLVIFNLLIKGFVEI--MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
              G  PNL  + +LI GF +   ++  G+     L K F +N   + Y+ +++A    G
Sbjct: 409 DAKGCKPNLNTYTILIDGFCKKGQLEEAGLILREMLTKGFSLN--TVGYNALISALCKHG 466

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            + +  ++F +M   G KPD   ++ L  G  R  E E A  L   M+  G   N V F 
Sbjct: 467 KIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFN 526

Query: 428 TIISGW-----------------------------------CSDGSMDRAIEVFDKMCEH 452
           T+I  +                                   C  G++++ + +F++M   
Sbjct: 527 TLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRK 586

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G++P++ T   L+ G+  A +   A E ++ M   G  P   T+  L       G  +EA
Sbjct: 587 GLTPSIITCNILINGFCTAGKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEA 646

Query: 513 KRILSKIK 520
             +  K++
Sbjct: 647 LNLFEKLQ 654



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/338 (29%), Positives = 170/338 (50%), Gaps = 9/338 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+N L ++G    A  + N++   G KP+L TYT L+     + +      I+ 
Sbjct: 382 VFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLILR 441

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G   +++ +NA+I+A  + G + EA+D F +M   G  P   T+N+LI G     
Sbjct: 442 EMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRVD 501

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E+++ L   M  EG V  N  T+N L+ A+     I EA  +++ M   G   D +TY
Sbjct: 502 EMEDALALYRDMVLEG-VIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITY 560

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  A  + G  ++   +  EM   G+ P+  TC I+I+G+C  GK+  AL F R M  
Sbjct: 561 NGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEFMRDMIH 620

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG- 367
            G  P++V +N LI G  +   R  + E L L ++ +   + PD ITY+T++      G 
Sbjct: 621 RGFSPDIVTYNSLINGLCK---RGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGA 677

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           F D C  ++  + + G  P+   ++IL   + ++   E
Sbjct: 678 FDDACFLLYRGV-ENGFVPNDVTWNILVYNFGKQSNSE 714



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 50/217 (23%), Positives = 94/217 (43%), Gaps = 1/217 (0%)

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE-FRVNPDVITYSTIMNA 362
           R    MKE G+     +F L++K +           +L  MK  +   P   +Y+ +++ 
Sbjct: 125 RLLLQMKEEGIVFRESLFILIMKYYGRAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDV 184

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
                       +F DM   G+ P+ + + ++ K      E + A  LL  M + G  PN
Sbjct: 185 LVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPN 244

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            +I+ T+I        +D A+++ ++M   G  P++ TF T+++G+    +     +++ 
Sbjct: 245 SMIYQTLIDALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVD 304

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            M   G  P   T+  L      T    EA+ +LSK+
Sbjct: 305 RMILKGFTPNDMTYGYLMHGLCKTCRIDEAQALLSKV 341



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 27/94 (28%), Positives = 48/94 (51%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   L+N L +RG+ QEA  +F  L   G +P  +TY TL+  L  +  F+    ++ 
Sbjct: 627 IVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGAFDDACFLLY 686

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
           +  ENG  P+ + +N ++  F +  N E    T+
Sbjct: 687 RGVENGFVPNDVTWNILVYNFGKQSNSEGQTITY 720


>gi|242056139|ref|XP_002457215.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
 gi|241929190|gb|EES02335.1| hypothetical protein SORBIDRAFT_03g003430 [Sorghum bicolor]
          Length = 573

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/434 (28%), Positives = 201/434 (46%), Gaps = 44/434 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGG----HKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           L+ +L    +P  A   F  L+ G     ++PS  +   LLAAL    R +         
Sbjct: 122 LVLALARASQPLAAYGAF--LLAGADYPRYRPSAFSVNALLAALVRADRVDLAERAFRAA 179

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY---GIA 190
               + PD   FN VI+   ++G + +A D    M+  GL P+  TYNTLI GY   G A
Sbjct: 180 LRRRVSPDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRA 239

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK      LL  M++ G + PN+ T+NVL+  +C E NIT A  V  +M   G+  ++VT
Sbjct: 240 GKMYHVDMLLKEMNQAG-ISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVT 298

Query: 251 YNTIATAYAQNGEADQAEEVIVEME----------------------------------H 276
           Y ++ +   + G+ + + +++ EME                                   
Sbjct: 299 YTSLVSGLCREGKVEDSMKLVEEMEELGLATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQ 358

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G++PN  T   +I GY + GK+KEA      M   G+ P++  +N LI GF    D   
Sbjct: 359 KGMKPNVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRS 418

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
           V  +L  MKE  V  D++TY+ ++ A    G + K  ++ D+M + G++P    Y+ +  
Sbjct: 419 VSGLLDEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIIN 478

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G+  + + + A ++ + M +     NVV     +  +C  G MD A  V ++M E G+ P
Sbjct: 479 GFCEKGDAKGAHDIRIRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVP 538

Query: 457 NLKTFETLMWGYSE 470
           N  T+E +  G  E
Sbjct: 539 NRITYEIINSGMIE 552



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/390 (23%), Positives = 179/390 (45%), Gaps = 52/390 (13%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI---MSQVE 134
           +++ L + G+ ++A  +  ++   G  PS+VTY TL+       R   ++ +   + ++ 
Sbjct: 194 VISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMN 253

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           + G+ P+ + FN +IN + +  N+  A+  F +M++ G+     TY +L+ G    GK E
Sbjct: 254 QAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVE 313

Query: 195 ESVKLLDLMSREG---------------------------------NVKPNLRTYNVLVR 221
           +S+KL++ M   G                                  +KPN+ TYN L+ 
Sbjct: 314 DSMKLVEEMEELGLATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLID 373

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
            +     + EA      MA  G+ PDV TYN + T +  + +      ++ EM+  GV+ 
Sbjct: 374 GYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKA 433

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T  ++I   C +G++++A++    M E G+ P    +N +I GF E  D  G  ++ 
Sbjct: 434 DLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIR 493

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M++ +   +V+T +  +  +   G MD+   + ++M + G+ P+   Y I+  G    
Sbjct: 494 IRMEKCKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSG---- 549

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
                       MIE G+ P++  +   +S
Sbjct: 550 ------------MIEKGYVPDIRGYAADVS 567



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/309 (26%), Positives = 141/309 (45%), Gaps = 37/309 (11%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V P+  T+N+++   C    + +A +V   M   G+ P VVTYNT+   Y + G A +  
Sbjct: 184 VSPDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMY 243

Query: 269 EV---IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            V   + EM   G+ PN  T  ++I+GYCKE  I  A++    M+++G+  N+V +  L+
Sbjct: 244 HVDMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLV 303

Query: 326 KGF------------VEIMDRDGVDEVLAL----------------------MKEFRVNP 351
            G             VE M+  G+  +  L                      M +  + P
Sbjct: 304 SGLCREGKVEDSMKLVEEMEELGLATLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKP 363

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           +V+TY+T+++ +   G M +       M   GI PD   Y+ L  G+    +      LL
Sbjct: 364 NVVTYNTLIDGYQRLGKMKEATAAKGAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLL 423

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M E+G   ++V +  +I   C  G + +A+++ D+M E G+ P  +T+  ++ G+ E 
Sbjct: 424 DEMKETGVKADLVTYNVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEK 483

Query: 472 RQPWRAEEI 480
                A +I
Sbjct: 484 GDAKGAHDI 492



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 154/310 (49%), Gaps = 2/310 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N   +      A  +F  + + G   ++VTYT+L++ L  + +      ++ 
Sbjct: 261 VVTFNVLINGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVE 320

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++EE G+       N+V+N F + G M EA      M + G+ P   TYNTLI GY   G
Sbjct: 321 EMEELGLATLPTL-NSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLG 379

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E+      M+ +G + P+++TYN L+  +    +      ++ +M  +G+K D+VTY
Sbjct: 380 KMKEATAAKGAMAGKG-ISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTY 438

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  A    GE  +A +++ EM   G++P  RT   II+G+C++G  K A      M++
Sbjct: 439 NVLIGALCCKGEVRKAVKLLDEMVEVGLEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEK 498

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
                N+V  N+ +K F ++   D  + VL  M E  + P+ ITY  I +     G++  
Sbjct: 499 CKKRANVVTCNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPD 558

Query: 372 CKEIFDDMGK 381
            +    D+ K
Sbjct: 559 IRGYAADVSK 568



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 145/314 (46%), Gaps = 41/314 (13%)

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           +P   + N +  A  +    D AE          V P+  T  I+ISG CK G++++A  
Sbjct: 150 RPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGD 209

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG----VDEVLALMKEFRVNPDVITYSTIM 360
            A+ M+ +G+ P++V +N LI G+ +   R G    VD +L  M +  ++P+V+T++ ++
Sbjct: 210 VAKDMRGWGLMPSVVTYNTLIDGYYK-WGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLI 268

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA-------EELLMT 413
           N +     +    ++F++M + GI  +   Y+ L  G  RE + E +       EEL + 
Sbjct: 269 NGYCKESNITAAIKVFEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLA 328

Query: 414 ---------------------------MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
                                      M + G  PNVV + T+I G+   G M  A    
Sbjct: 329 TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAK 388

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRA-EEILQIMKAFGVHPQKSTFLLLAEARRA 505
             M   G+SP++KT+  L+ G++ +   WR+   +L  MK  GV     T+ +L  A   
Sbjct: 389 GAMAGKGISPDVKTYNCLITGFTTSTD-WRSVSGLLDEMKETGVKADLVTYNVLIGALCC 447

Query: 506 TGLTKEAKRILSKI 519
            G  ++A ++L ++
Sbjct: 448 KGEVRKAVKLLDEM 461



 Score =  105 bits (263), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/236 (27%), Positives = 116/236 (49%), Gaps = 1/236 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ ++  ++N   ++G   EA+   + + + G KP++VTY TL+       +     +  
Sbjct: 329 TLPTLNSVLNGFCKKGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEATAAK 388

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   G+ PD   +N +I  F+ S +         +MKE+G+     TYN LI      
Sbjct: 389 GAMAGKGISPDVKTYNCLITGFTTSTDWRSVSGLLDEMKETGVKADLVTYNVLIGALCCK 448

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+  ++VKLLD M   G ++P  RTYN ++  +C + +   A ++  +M     + +VVT
Sbjct: 449 GEVRKAVKLLDEMVEVG-LEPKHRTYNAIINGFCEKGDAKGAHDIRIRMEKCKKRANVVT 507

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
            N     + + G+ D+A  V+ EM   G+ PN  T  II SG  ++G + +   +A
Sbjct: 508 CNVFLKYFCKMGKMDEANVVLNEMLEKGLVPNRITYEIINSGMIEKGYVPDIRGYA 563



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 134/282 (47%), Gaps = 5/282 (1%)

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
           +++  + AS  +P V     +A A A    A     ++   ++   +P+  +   +++  
Sbjct: 105 SILRALPASS-RPLVADMLVLALARASQPLAAYGAFLLAGADYPRYRPSAFSVNALLAAL 163

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
            +  ++  A R  R      V P+   FN++I G  +        +V   M+ + + P V
Sbjct: 164 VRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKAGDVAKDMRGWGLMPSV 223

Query: 354 ITYSTIMNA---WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           +TY+T+++    W  AG M     +  +M +AGI P+   +++L  GY +E     A ++
Sbjct: 224 VTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVLINGYCKESNITAAIKV 283

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
              M + G   N+V +T+++SG C +G ++ ++++ ++M E G++  L T  +++ G+ +
Sbjct: 284 FEEMRQHGIPANMVTYTSLVSGLCREGKVEDSMKLVEEMEELGLA-TLPTLNSVLNGFCK 342

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
                 AE  +  M   G+ P   T+  L +  +  G  KEA
Sbjct: 343 KGMMVEAEGWVDGMAQKGMKPNVVTYNTLIDGYQRLGKMKEA 384



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 8/169 (4%)

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
           R  P   + + ++ A   A  +D  +  F    +  + PD   ++I+  G  +  +  KA
Sbjct: 148 RYRPSAFSVNALLAALVRADRVDLAERAFRAALRRRVSPDKFTFNIVISGLCKTGQLRKA 207

Query: 408 EELLMTMIESGFHPNVVIFTTIISG---WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            ++   M   G  P+VV + T+I G   W   G M     +  +M + G+SPN+ TF  L
Sbjct: 208 GDVAKDMRGWGLMPSVVTYNTLIDGYYKWGRAGKMYHVDMLLKEMNQAGISPNVVTFNVL 267

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           + GY +      A ++ + M+  G+     T+  L      +GL +E K
Sbjct: 268 INGYCKESNITAAIKVFEEMRQHGIPANMVTYTSL-----VSGLCREGK 311


>gi|356519375|ref|XP_003528348.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 589

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 211/430 (49%), Gaps = 2/430 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+N L   G    A    ++L + GH+ +  TY  ++  L      +     +
Sbjct: 140 TVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGDTSGAILYL 199

Query: 131 SQVEENGMDPDSIF-FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
            +++    D D +  ++ ++++  + G + EA++ F  M   G+ P    YN+LI G   
Sbjct: 200 EKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCN 259

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+ +E+  LL  M R+G + PN++T+NVLV  +C +  I+ A  +M  M   G++PDVV
Sbjct: 260 FGRWKEATTLLGNMMRKG-IMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVV 318

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN++ + +    +   A +V   M H G  PN  T   +I G+CK   I +AL     M
Sbjct: 319 TYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEM 378

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G++P++V ++ LI GF +    +   E+   M E   +P++ T + I++      F 
Sbjct: 379 VNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFH 438

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +   +F +M K  ++ +   Y+I+  G     +   A+EL   +   G   +VV +TT+
Sbjct: 439 SEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTM 498

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G C +G +D A  +  KM E+G  PN  T+   + G  +     R+ + L +MK  G+
Sbjct: 499 IKGLCKEGLLDDAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGL 558

Query: 490 HPQKSTFLLL 499
               +T  LL
Sbjct: 559 SADATTTELL 568



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 191/376 (50%), Gaps = 2/376 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            V + + +M+SL + G   EA  +F+ +   G +P LV Y +L+  L    R+    +++
Sbjct: 211 VVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLL 270

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   G+ P+   FN +++ F + G +  A      M   G+ P   TYN++I G+ + 
Sbjct: 271 GNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLL 330

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +  ++VK+ +LM  +G + PNL TY+ L+  WC  KNI +A  ++ +M  SG+ PDVVT
Sbjct: 331 SQMGDAVKVFELMIHKGFL-PNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVT 389

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           ++T+   + + G+ + A+E+   M  +   PN +TC II+ G  K     EA+   R M+
Sbjct: 390 WSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREME 449

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           +  +  N+VI+N+++ G       +   E+ + +    +  DV+ Y+T++      G +D
Sbjct: 450 KMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLD 509

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             + +   M + G  P+   Y++  +G ++  +  ++ + L+ M   G   +      +I
Sbjct: 510 DAENLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLI 569

Query: 431 SGWCSDGSMDRAIEVF 446
           S + S    + A+ VF
Sbjct: 570 S-YFSANKENSALHVF 584



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/459 (23%), Positives = 200/459 (43%), Gaps = 35/459 (7%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           +  TKL   +++        ++  ++   G KP + T T ++  L          S++  
Sbjct: 72  KDFTKLFGIIVKMKHYATTISLIKHIYSLGIKPDVYTLTIIINCLCHLNHTVFGFSVLGV 131

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + + G+DP  + F  +IN     GN+  A      +++ G    + TY  +I G   AG 
Sbjct: 132 MFKIGVDPTVVTFATLINGLCAEGNVARAARFADSLEDMGHQSNSYTYGAIINGLCKAGD 191

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
              ++  L+ +         +  Y+ ++ + C +  + EA N+   M + G++PD+V YN
Sbjct: 192 TSGAILYLEKIKGRNCDLDVVIAYSTIMDSLCKDGMVCEALNLFSGMTSKGIQPDLVAYN 251

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++       G   +A  ++  M   G+ PN +T  +++  +CK+G I  A      M   
Sbjct: 252 SLIHGLCNFGRWKEATTLLGNMMRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHV 311

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           GV P++V +N +I G   +       +V  LM      P+++TYS++++ W     ++K 
Sbjct: 312 GVEPDVVTYNSVISGHCLLSQMGDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKA 371

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP----------- 421
             +  +M  +G+ PD   +S L  G+ +  +PE A+EL  TM E   HP           
Sbjct: 372 LFLLGEMVNSGLNPDVVTWSTLIGGFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDG 431

Query: 422 ------------------------NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
                                   NVVI+  ++ G CS G ++ A E+F  +   G+  +
Sbjct: 432 LFKCQFHSEAISLFREMEKMNLELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKID 491

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           +  + T++ G  +      AE +L  M+  G  P + T+
Sbjct: 492 VVAYTTMIKGLCKEGLLDDAENLLMKMEENGCLPNEFTY 530



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 108/451 (23%), Positives = 201/451 (44%), Gaps = 10/451 (2%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           + ++S+ +    + A + F+ ++     P    +T L   +   K + +  S++  +   
Sbjct: 41  QFLDSMRDLKSEEAALSFFHKMVVMNPLPREKDFTKLFGIIVKMKHYATTISLIKHIYSL 100

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G+ PD      +IN      +          M + G+ PT  T+ TLI G    G    +
Sbjct: 101 GIKPDVYTLTIIINCLCHLNHTVFGFSVLGVMFKIGVDPTVVTFATLINGLCAEGNVARA 160

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV-TYNTIA 255
            +  D +   G+ + N  TY  ++   C   + + A   + K+       DVV  Y+TI 
Sbjct: 161 ARFADSLEDMGH-QSNSYTYGAIINGLCKAGDTSGAILYLEKIKGRNCDLDVVIAYSTIM 219

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            +  ++G   +A  +   M   G+QP+      +I G C  G+ KEA      M   G+ 
Sbjct: 220 DSLCKDGMVCEALNLFSGMTSKGIQPDLVAYNSLIHGLCNFGRWKEATTLLGNMMRKGIM 279

Query: 316 PNLVIFNLLIKGFVEIMDRDGV----DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           PN+  FN+L+  F     +DG+      ++  M    V PDV+TY+++++       M  
Sbjct: 280 PNVQTFNVLVDNFC----KDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQMGD 335

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++F+ M   G  P+   YS L  G+ + +   KA  LL  M+ SG +P+VV ++T+I 
Sbjct: 336 AVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTLIG 395

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C  G  + A E+F  M EH   PNL+T   ++ G  + +    A  + + M+   +  
Sbjct: 396 GFCKAGKPEAAKELFCTMHEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMNLEL 455

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
               + ++ +   + G   +A+ + S + +K
Sbjct: 456 NVVIYNIVLDGMCSFGKLNDAQELFSCLPSK 486



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/301 (23%), Positives = 149/301 (49%), Gaps = 1/301 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M K     V++   L+++  + G    A+ I   ++  G +P +VTY ++++   +  + 
Sbjct: 274 MRKGIMPNVQTFNVLVDNFCKDGMISRAKTIMGFMVHVGVEPDVVTYNSVISGHCLLSQM 333

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                +   +   G  P+ + ++++I+ + ++ N+ +A+    +M  SGL P   T++TL
Sbjct: 334 GDAVKVFELMIHKGFLPNLVTYSSLIHGWCKTKNINKALFLLGEMVNSGLNPDVVTWSTL 393

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G+  AGKPE + +L   M  E +  PNL+T  +++      +  +EA ++  +M    
Sbjct: 394 IGGFCKAGKPEAAKELFCTM-HEHDQHPNLQTCAIILDGLFKCQFHSEAISLFREMEKMN 452

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++ +VV YN +       G+ + A+E+   +   G++ +      +I G CKEG + +A 
Sbjct: 453 LELNVVIYNIVLDGMCSFGKLNDAQELFSCLPSKGIKIDVVAYTTMIKGLCKEGLLDDAE 512

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M+E G  PN   +N+ ++G ++  D     + L LMK   ++ D  T   +++ +
Sbjct: 513 NLLMKMEENGCLPNEFTYNVFVRGLLQRYDISRSTKYLLLMKGKGLSADATTTELLISYF 572

Query: 364 S 364
           S
Sbjct: 573 S 573


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/455 (26%), Positives = 209/455 (45%), Gaps = 20/455 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + ++++L +  +  +A   F  +   G  P++VTY++L+  L    R +  +S++ 
Sbjct: 108 VISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLM 167

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q++   M P ++++NAV+N F   G   E ++    MKE G       +N ++       
Sbjct: 168 QLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKND 227

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E++ +  + + + G  KPN+ TYNV V   C    + EA+ ++ +M  S + PDV+TY
Sbjct: 228 EQEKACQFFERLLKSGK-KPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITY 286

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           ++I   + + G  D+A++V   M  +   P+  T   ++ G+ +  K +EA R    M  
Sbjct: 287 SSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVN 346

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P L  +N+L+         +   E+   MK  +  PD  TY+ ++     A  +D+
Sbjct: 347 AGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDE 406

Query: 372 CKEIFDDMGKAGIKPD---AHAY-SILAK-GYVREQ--------------EPEKAEELLM 412
            KE  D M    + P+    HA   +L K G V E               EP++A E++ 
Sbjct: 407 AKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEVIE 466

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M+  G  P+   +  ++   C    +D AI  F+KM   G +P L T+  L+     A 
Sbjct: 467 QMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACSAD 526

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
               A  I + M A G  PQ  T   L+   R  G
Sbjct: 527 MADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 561



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 109/385 (28%), Positives = 191/385 (49%), Gaps = 7/385 (1%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +  VIN F ++G +++A +   +MKE G+      ++TLI+G    G+ +E+++    M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM-----AASGMKPDVVTYNTIATAYA 259
            E    PN+ TYN +V   C    I E   +   M     A+ G +PDV++Y+T+  A  
Sbjct: 62  EE--CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +    D+A E    M   G  PN  T   +I G CK  ++ EA      +K   + P  +
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            +N ++ GF          E+L  MKE     ++I ++ +++A       +K  + F+ +
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERL 239

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            K+G KP+   Y++   G  +  + ++A  +L+ M+ES   P+V+ +++II G+C  G M
Sbjct: 240 LKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRM 299

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D+A +VF +M  H   P+  TF TL+ G+SE ++   A  + + M   G  P   T+ +L
Sbjct: 300 DKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVL 359

Query: 500 AEARRATGLTKEAKRILSKIKNKER 524
            +        + A  I  K+K K+R
Sbjct: 360 MDCVCGADSVESALEIYHKMKRKKR 384



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 120/504 (23%), Positives = 227/504 (45%), Gaps = 48/504 (9%)

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK 169
           YTT++       + +    ++ +++E G+  D +  + +I      G ++EA++ F  M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE----GNVKPNLRTYNVLVRAWCN 225
           E   +P   TYNT++ G   A + +E ++L D M +        +P++ +Y+ ++ A C 
Sbjct: 62  EE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
            + + +A+    +M A G  P+VVTY+++     +    D+A  ++++++   + P    
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYG-----------VH------------------- 315
              +++G+ ++GK  E L     MKE G           +H                   
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 316 -----PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                PN+V +N+ + G  +    D    +L  M E +V PDVITYS+I++ +  AG MD
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMD 300

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K  ++F  M      P    +  L  G+   ++  +A  +   M+ +GF P +  +  ++
Sbjct: 301 KADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLM 360

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C   S++ A+E++ KM      P+  T+  L+     AR+   A+E L +M+A  V 
Sbjct: 361 DCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVV 420

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHK--EAT 548
           P  +    L E     G   EA  +L  +    +      E D  VE +E++  K     
Sbjct: 421 PNGAICHALVEVLCKQGEVDEACSVLDNVVEICKA----GEPDEAVEVIEQMVLKGVRPD 476

Query: 549 TASYPNLLQIPNVVSSDQKGSAAA 572
            A+Y  +L+  ++   D+  SA A
Sbjct: 477 EATYVAVLR--SLCGLDRVDSAIA 498



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 141/347 (40%), Gaps = 55/347 (15%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++L +  + ++A   F  L++ G KP++VTY   +  L    + +  + I+ ++ E+ 
Sbjct: 219 MLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESK 278

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD I ++++I+ F ++G M++A D F +M      P   T+ TL+ G+    K  E+ 
Sbjct: 279 VTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAF 338

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP----------- 246
           ++ + M   G + P L+TYNVL+   C   ++  A  + HKM     +P           
Sbjct: 339 RVHEDMVNAGFI-PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQC 397

Query: 247 --------------------DVVTYNTIATAYAQ-----------------------NGE 263
                               +VV    I  A  +                        GE
Sbjct: 398 LCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGE 457

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D+A EVI +M   GV+P+  T   ++   C   ++  A+     M   G  P LV + L
Sbjct: 458 PDEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTL 517

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           LI         D    +   M      P   T  T+ +    AG+ D
Sbjct: 518 LIGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 564



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 94/208 (45%), Gaps = 6/208 (2%)

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           ++  +I GF +    D   E+L  MKE  V  DV+ +ST++      G +D+  E F  M
Sbjct: 1   MYTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSM 60

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM-----IESGFHPNVVIFTTIISGWC 434
           G+    P+   Y+ +  G  +    ++  EL   M        G  P+V+ ++T+I   C
Sbjct: 61  GEE-CSPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALC 119

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
               +D+A E F +M   G +PN+ T+ +L+ G  +  +   A  +L  +K   + P+  
Sbjct: 120 KAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAM 179

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
            +  +    +  G   E   +L  +K K
Sbjct: 180 YYNAVVNGFKRQGKPSECLELLLHMKEK 207


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 112/450 (24%), Positives = 214/450 (47%), Gaps = 34/450 (7%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P ++ +  ++ +L   K + +  S+  Q++  G++PD    N +IN F   G M  +   
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG----------------- 207
             K+ + G  P T T NTL+KG  + G+ ++S+   D +  +G                 
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 208 -----------------NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
                            + +PN+  YN ++   C +K + EA+++  +M A G+ P+V+T
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+T+   +   G+  +A  ++ EM    + PN  T  I++   CKEGK+KEA      M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + GV PN+V +N L+ G+  I +     ++   M +  VNP+V +Y+ +++    +  +D
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +  ++    + P+   YS L  G+ +      A +LL  M   G   +VV +T+++
Sbjct: 308 EAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLL 367

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C + ++D+A  +F KM E G+ PN  T+  L+ G  +  +   A+++ Q +   G  
Sbjct: 368 DALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCR 427

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIK 520
               T+ ++       G+  EA  + SK++
Sbjct: 428 INVWTYNVMISGLCKEGMLDEALAMKSKME 457



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 209/448 (46%), Gaps = 36/448 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+N     G+   +  +   +++ G++P+ +T  TL+  L ++           +V
Sbjct: 47  TLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKV 106

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G   D + +  ++N   + G    A+     +++    P    YNT+I G       
Sbjct: 107 VAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLV 166

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+  L   M   G + PN+ TY+ L+  +C    + EA+ ++++M    + P+V TY  
Sbjct: 167 NEAYDLYSEMDARG-IFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTI 225

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A  + G+  +A+ ++  M   GV+PN  +   ++ GYC  G+++ A +   TM + G
Sbjct: 226 LMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKG 285

Query: 314 VHPNLVIFNLLIKGFV-------------EIMDR-------------DG------VDEVL 341
           V+PN+  +N++I                 E++ +             DG      +   L
Sbjct: 286 VNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSAL 345

Query: 342 ALMKEF--RVNP-DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            L+KE   R  P DV+TY+++++A      +DK   +F  M + GI+P+ + Y+ L  G 
Sbjct: 346 DLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGL 405

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +    + A++L   ++  G   NV  +  +ISG C +G +D A+ +  KM E+G  P+ 
Sbjct: 406 CKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDA 465

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKA 486
            TFE ++    E  Q  +AE++L  M A
Sbjct: 466 VTFEIIIRSLFEKDQNDKAEKLLHEMIA 493



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/312 (23%), Positives = 153/312 (49%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P +  +N +V +    K+   A ++  +M   G++PD+ T N +   +   G+   +  V
Sbjct: 8   PPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFTV 67

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + ++   G QPN  T   ++ G C +G++K++L F   +   G   + V +  L+ G  +
Sbjct: 68  LGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCK 127

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           I +     ++L ++++    P+V+ Y+TI++       +++  +++ +M   GI P+   
Sbjct: 128 IGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVIT 187

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YS L  G+    +  +A  LL  MI    +PNV  +T ++   C +G +  A  +   M 
Sbjct: 188 YSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMT 247

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           + GV PN+ ++ TLM GY    +   A+++   M   GV+P   ++ ++ +    +    
Sbjct: 248 KEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVD 307

Query: 511 EAKRILSKIKNK 522
           EA  +L ++ +K
Sbjct: 308 EAMNLLREVLHK 319



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 96/204 (47%), Gaps = 6/204 (2%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L++   + G+   A  +   +   G    +VTYT+LL AL   +  +   ++  +++E
Sbjct: 329 SSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 388

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ P+   + A+I+   + G  + A   F  +   G      TYN +I G    G  +E
Sbjct: 389 RGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDE 448

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++ +   M   G + P+  T+ +++R+   +    +A  ++H+M A     D++ +    
Sbjct: 449 ALAMKSKMEENGCI-PDAVTFEIIIRSLFEKDQNDKAEKLLHEMIAK----DLLRFRDFH 503

Query: 256 TAYAQNGEADQAEEVIVEMEHNGV 279
              + N E D+AE+++ EM   G+
Sbjct: 504 GERSPN-ENDKAEKLLHEMIAKGL 526



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/172 (18%), Positives = 75/172 (43%)

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
           R  P ++ ++ I+ +            +F  M   GI+PD    +IL   +    +   +
Sbjct: 5   RDTPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFS 64

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +L  +++ G+ PN +   T++ G C  G + +++   DK+   G   +  ++ TL+ G
Sbjct: 65  FTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNG 124

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             +  +   A ++L++++     P    +  + +      L  EA  + S++
Sbjct: 125 LCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEM 176


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  186 bits (471), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 229/458 (50%), Gaps = 7/458 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + T L++ L + G    AQA+   + + G  P++VTYT L+  L   +R +     +
Sbjct: 9   SVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTV 68

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  +G +PD + +N++I+    +  M++A     ++  +G  P   TY+TL+      
Sbjct: 69  KRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWNCRR 128

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH--KMAASGMKPDV 248
            + +++  L+  M   G+V  NL  Y   +  +C  +  +  +      +M  SG  PDV
Sbjct: 129 RRLDQARGLIREMILRGSV-CNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDV 187

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTYNT  +   + G+ D+  E++ EM+  G+ P+  T   IISG CK  +I +A +  + 
Sbjct: 188 VTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKG 247

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP--DVITYSTIMNAWSTA 366
           M E G  P+ + +++++         D VDEVL  M+  +     +V T++  + A   +
Sbjct: 248 MLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRS 307

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG-FHPNVVI 425
           G     K I   M ++G  P+  +Y+ +  G  +    + A +L   M++SG   P+V+ 
Sbjct: 308 GKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIF 367

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVS-PNLKTFETLMWGYSEARQPWRAEEILQIM 484
           F T+ISG+C  G + +A ++  +M    +  P++ T+ TL+ G S+     +A+ +LQ M
Sbjct: 368 FNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEM 427

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +A G  P   T+  L       G+ +EA+ +  ++  K
Sbjct: 428 QAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAK 465



 Score =  172 bits (436), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/506 (24%), Positives = 218/506 (43%), Gaps = 79/506 (15%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++ L +  +P +A      ++  G +P LVTY +L+  L +  R +    ++ 
Sbjct: 45  VVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQ 104

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEA-------------------MDTFW------ 166
           ++  NG  P+ I ++ ++        +++A                   +D  +      
Sbjct: 105 ELVRNGFAPNHITYSTLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEAR 164

Query: 167 ------------KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
                       +M ESG  P   TYNT I G   AGK ++ +++L+ M R G + P++ 
Sbjct: 165 CQSSRYECRDGDEMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDR-GGIPPDVV 223

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           T+  ++   C    I +A+ V   M   G  PD +TY+ +    ++    D  +EV+  M
Sbjct: 224 TFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHM 283

Query: 275 E------------HN-------------------------GVQPNGRTCGIIISGYCKEG 297
           +            HN                         G  PN  +   +I G CK G
Sbjct: 284 QAMKAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSG 343

Query: 298 KIKEALRFARTMKEYGV-HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN-PDVIT 355
            + +A + +R M + G   P+++ FN LI GF +        ++L  MK   +  PDV+T
Sbjct: 344 NVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVT 403

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+T+++  S  G + + K +  +M   G KP+   Y+ L  GY +    E+AE L   M 
Sbjct: 404 YNTLIDGQSKFGSLKQAKLLLQEMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMS 463

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG--VSPNLKTFETLMWGYSEARQ 473
             G  P+++ + T++S +   G M +A  V+ ++       SP+  T+  L+ GY  A  
Sbjct: 464 AKGCFPDIITYNTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAED 523

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLL 499
             +   +LQ M A G      T+ +L
Sbjct: 524 TEQGLTLLQEMTARGWSCDSYTYNVL 549



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 197/426 (46%), Gaps = 42/426 (9%)

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           NG D   + +  +I+   +SG+++ A     KM ++G  P   TY  LI G   A +P +
Sbjct: 4   NGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHD 63

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +++ +  M R G  +P+L TYN L+   C    + +A  V+ ++  +G  P+ +TY+T+ 
Sbjct: 64  AIQTVKRMLRSG-CEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLV 122

Query: 256 TAYAQNGEADQAEEVIV-------------------------------------EMEHNG 278
               +    DQA  +I                                      EM  +G
Sbjct: 123 IWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESG 182

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
             P+  T    ISG CK GK+ + L     M   G+ P++V F  +I G  +    D   
Sbjct: 183 RIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAF 242

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG--KAGIKPDAHAYSILAK 396
           +V   M E    PD +TYS +++  S A  +D   E+ + M   KAG   + + ++    
Sbjct: 243 QVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIG 302

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS- 455
              R  +   A+ +L+ MIESG  PN++ +  +I G C  G++D A ++  KM + G   
Sbjct: 303 ALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCK 362

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH-PQKSTFLLLAEARRATGLTKEAKR 514
           P++  F TL+ G+ +A +  +A ++L  MKA  +  P   T+  L + +   G  K+AK 
Sbjct: 363 PDVIFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKL 422

Query: 515 ILSKIK 520
           +L +++
Sbjct: 423 LLQEMQ 428



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 105/435 (24%), Positives = 195/435 (44%), Gaps = 43/435 (9%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +    ++ L + GK  +   +   +  GG  P +VT+ ++++ L    R +    +  
Sbjct: 187 VVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFK 246

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK--ESGLTPTTSTYNTLIKGYGI 189
            + E G  PDS+ ++ +++  S +  ++   +    M+  ++G      T+N  I     
Sbjct: 247 GMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCR 306

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM-KPDV 248
           +GK   +  +L  M   G++ PNL +YN ++   C   N+ +AW +  KM  SG  KPDV
Sbjct: 307 SGKFPLAKNILLGMIESGSL-PNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDV 365

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEME-HNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           + +NT+ + + + G   QA ++++EM+  N   P+  T   +I G  K G +K+A    +
Sbjct: 366 IFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQ 425

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M+  G  PN+V +  LI G+ +    +  + +   M      PD+ITY+T+++A+S AG
Sbjct: 426 EMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAG 485

Query: 368 FMDKCKEIFDDMGK--AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH----- 420
            M K + ++  +    +   PDA  Y IL  GY R ++ E+   LL  M   G+      
Sbjct: 486 MMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYT 545

Query: 421 -------------------------------PNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
                                          P+  IF +++  +   G ++ A  +  +M
Sbjct: 546 YNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEM 605

Query: 450 CEHGVSPNLKTFETL 464
            E G   +    E L
Sbjct: 606 NEKGHLVDASNLEAL 620



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/289 (28%), Positives = 136/289 (47%), Gaps = 13/289 (4%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M  +G   +  TY TLI G   +G  + +  LL  M+  G   PN+ TY  L+   C  +
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAG-CAPNVVTYTALIDGLCKAR 59

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
              +A   + +M  SG +PD+VTYN++          D A  V+ E+  NG  PN  T  
Sbjct: 60  RPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYS 119

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM-------DRDGVDEV 340
            ++   C+  ++ +A    R M   G   NLV++   I GF E          RDG DE 
Sbjct: 120 TLVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDG-DE- 177

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
             +++  R+ PDV+TY+T ++    AG +DK  E+ ++M + GI PD   +  +  G  +
Sbjct: 178 --MIESGRI-PDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCK 234

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
               + A ++   M+E G  P+ + ++ ++        +D   EV + M
Sbjct: 235 ANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHM 283



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 127/288 (44%), Gaps = 41/288 (14%)

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           MAA+G    VVTY T+     ++G+ D A+ ++ +M   G  PN  T   +I G CK  +
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
             +A++  + M   G  P+LV +N LI G       D    VL  +      P+ ITYST
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 359 IMNAWSTA-------------------------------GFMD--------KCKEIFDDM 379
           ++  W+                                 GF +        +C++  D+M
Sbjct: 121 LV-IWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRD-GDEM 178

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            ++G  PD   Y+    G  +  + +K  E+L  M   G  P+VV F +IISG C    +
Sbjct: 179 IESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRI 238

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           D A +VF  M E G  P+  T+  ++   S A +    +E+L+ M+A 
Sbjct: 239 DDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAM 286



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 116/277 (41%), Gaps = 46/277 (16%)

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M  NG   +  T   +I G CK G +  A    + M + G  PN+V +  LI G  +   
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
                + +  M      PD++TY+++++    A  MD    +  ++ + G  P+   YS 
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 394 L------------AKGYVREQ-----------------------------EPEKAEELLM 412
           L            A+G +RE                              E    +E   
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDE--- 177

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            MIESG  P+VV + T ISG C  G +D+ +E+ ++M   G+ P++ TF +++ G  +A 
Sbjct: 178 -MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKAN 236

Query: 473 QPWRAEEILQIMKAFGVHPQKSTF-LLLAEARRATGL 508
           +   A ++ + M   G  P   T+ ++L    RA  L
Sbjct: 237 RIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRL 273



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 51/219 (23%), Positives = 91/219 (41%), Gaps = 40/219 (18%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M    C+  V +   L+N   + G  +EA+++F+ +   G  P ++TY            
Sbjct: 427 MQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITY------------ 474

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE--SGLTPTTSTY 180
                                  N V++AFS++G M +A   + ++K   S  +P   TY
Sbjct: 475 -----------------------NTVLSAFSKAGMMSKAEGVYQQLKNKTSYCSPDAITY 511

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI-TEAWNVMHKM 239
             LI GY  A   E+ + LL  M+  G    +  TYNVL+      + + ++A  V  +M
Sbjct: 512 RILIDGYCRAEDTEQGLTLLQEMTARG-WSCDSYTYNVLIAKLAETEEVPSKALAVYQQM 570

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
                 P    +N++   + + G+ + A  ++ EM   G
Sbjct: 571 LDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEMNEKG 609


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 230/478 (48%), Gaps = 7/478 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAI-FNNLIE-GGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           ++    K++ SL++        AI  +  +E  G  P + T+  L+         N   S
Sbjct: 65  SIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGITPDIFTFNILINCYCHMAEMNFAFS 124

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +M+++ + G +PD+I FN +I     +G ++EA+     +   G      +Y TLI G  
Sbjct: 125 MMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYGTLINGLC 184

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G+   ++++L  +  +  VK N+  YN ++ + C  K + +A+ +  +M A  + PDV
Sbjct: 185 KIGETRTALQMLRKIDGKL-VKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDV 243

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VT++ +   +   G+ ++A  +  EM    + P+  T  I++   CKEG +K A      
Sbjct: 244 VTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVV 303

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M + GV PN+V ++ L+ G+  +   +    VL  + +    P+  +Y T++N +     
Sbjct: 304 MMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKM 363

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D+   +F+DM   GI PD   Y+ L  G  +      A EL+  M ++G   N+  +  
Sbjct: 364 VDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNC 423

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I   C +  +D+AI +  K+ + G+ P++ TF  L++G  +  +   A+++ Q + + G
Sbjct: 424 LIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKG 483

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKE 546
                 T+ ++       GL  EA+ +LSK+ +     +    E +    ++ L+HK+
Sbjct: 484 YSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETL----IQALFHKD 537



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 194/402 (48%), Gaps = 7/402 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L+N L + G+ + A  +   +     K ++V Y T++ +L   K     + + SQ+
Sbjct: 175 SYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQM 234

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
               + PD + F+A+I  F   G +EEA   F +M    + P   T+N L+      G  
Sbjct: 235 IAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNL 294

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + +  +L +M +EG V PN+ TY+ L+  +C    + +A +V++ ++  G  P+  +Y T
Sbjct: 295 KGAKNMLVVMMKEG-VMPNVVTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCT 353

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + +    D+A  +  +M+  G+ P+  T   +I G CK G+I  A      M + G
Sbjct: 354 MINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNG 413

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMD 370
              N+  +N LI    +      VD+ +AL+K+ +   + PD+ T++ ++      G + 
Sbjct: 414 QPANIFTYNCLIDALCK---NHHVDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLK 470

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             +++F D+   G   +A  Y+I+  G  +E   ++AE LL  M ++G  P+ V + T+I
Sbjct: 471 NAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLI 530

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
                    ++A ++  +M    V   L+  E ++   SEA+
Sbjct: 531 QALFHKDENEKAEKLLREMIARDVVYALEGLEMVLHLESEAK 572


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/440 (25%), Positives = 213/440 (48%), Gaps = 11/440 (2%)

Query: 80  NSLIER----GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           NSLI+     G+  E + +   +   G K  +VTY  L+       R  + +   + ++ 
Sbjct: 227 NSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKR 286

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+  + + F+  ++AF + G + EAM  F +M+  G+     TY  LI G   AG+ ++
Sbjct: 287 EGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDD 346

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++ LLD M R+G V  N+ TY VLV   C E+ + EA +V+  M  +G++ + + Y T+ 
Sbjct: 347 AIVLLDEMVRQG-VPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLI 405

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             +  N  +++A  ++ EM++ G++ +    G +I G C   K+ EA      M E G+ 
Sbjct: 406 HGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLE 465

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKC 372
           PN +I+  ++    +      V E +A++++       P+VITY  +++    AG +D+ 
Sbjct: 466 PNYIIYTTMMDACFK---SGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEA 522

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
              F+ M   G+ P+  AY+ L  G  +     +A +L   M+  G   + V++T ++ G
Sbjct: 523 ISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDG 582

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +   G++  A  +  KM + G+  +L  +   + G+        A E+   M   G+ P 
Sbjct: 583 YLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPD 642

Query: 493 KSTFLLLAEARRATGLTKEA 512
           ++ +  L    +  G  +EA
Sbjct: 643 RAVYNCLISKYQKLGNLEEA 662



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 195/395 (49%), Gaps = 7/395 (1%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T+  N ++ R     +  +   L E    P++ T+  ++  L  +       S+ S+++E
Sbjct: 157 TRTCNHILLRLARDRSGRLVRRLFEQLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKE 216

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  PD + FN++I+ + + G ++E      +M+ SG      TYN LI  +   G+ E 
Sbjct: 217 MGCLPDVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMET 276

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +      M REG V  N+ T++  V A+C E  + EA  +  +M   GM  +  TY  + 
Sbjct: 277 AYGYFAAMKREG-VMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLI 335

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G  D A  ++ EM   GV  N  T  +++ G CKE K+ EA    R M++ GV 
Sbjct: 336 DGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVR 395

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKC 372
            N +++  LI G    M+++  ++ L L+ E +   +  D+  Y  ++        +D+ 
Sbjct: 396 ANELLYTTLIHG--HFMNKNS-EKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEA 452

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           K +   M ++G++P+   Y+ +     +  +  +A  +L  +++SGF PNV+ +  +I G
Sbjct: 453 KSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDG 512

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            C  GS+D AI  F+KM + G+ PN++ +  L+ G
Sbjct: 513 LCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDG 547



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 212/449 (47%), Gaps = 13/449 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L +RG   +A      + E    P+  T   +L  L   +    +  +  Q+    
Sbjct: 128 LLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA-- 185

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+   FN VI+   + G + EA   F +MKE G  P   T+N+LI GYG  G+ +E  
Sbjct: 186 --PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVE 243

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L++ M R G  K ++ TYN L+  +C    +  A+     M   G+  +VVT++T   A
Sbjct: 244 QLVEEMRRSG-CKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDA 302

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G   +A ++  +M   G+  N  T   +I G CK G++ +A+     M   GV  N
Sbjct: 303 FCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLN 362

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE--- 374
           +V + +L+ G  +       ++VL +M++  V  + + Y+T+++      FM+K  E   
Sbjct: 363 VVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGH----FMNKNSEKAL 418

Query: 375 -IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +  +M   G++ D   Y  L +G     + ++A+ LL  M ESG  PN +I+TT++   
Sbjct: 419 GLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDAC 478

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G +  AI +  K+ + G  PN+ T+  L+ G  +A     A      M+  G+ P  
Sbjct: 479 FKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNV 538

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK 522
             +  L +     G   EA ++ +++ +K
Sbjct: 539 QAYTALVDGLCKNGCLNEAVQLFNEMVHK 567



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 159/335 (47%), Gaps = 1/335 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++   + G+  +A  + + ++  G   ++VTYT L+  L  +++      ++  +E+
Sbjct: 332 TCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEK 391

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+  + + +  +I+    + N E+A+    +MK  GL    S Y  LI+G     K +E
Sbjct: 392 AGVRANELLYTTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDE 451

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  LL  M   G ++PN   Y  ++ A      + EA  ++ K+  SG +P+V+TY  + 
Sbjct: 452 AKSLLTKMDESG-LEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALI 510

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G  D+A     +M   G+ PN +    ++ G CK G + EA++    M   G+ 
Sbjct: 511 DGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMS 570

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            + V++  L+ G+++  +      + A M +  +  D+  Y+  ++ +     M + +E+
Sbjct: 571 LDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREV 630

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           F +M   GI PD   Y+ L   Y +    E+A  L
Sbjct: 631 FSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISL 665



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 31/302 (10%)

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC------------------------- 286
           +T+ +  A  G  D A   +  +    V PN RTC                         
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLARDRSGRLVRRLFEQLPA 185

Query: 287 ------GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
                  I+I   CKEG++ EA      MKE G  P++V FN LI G+ +  + D V+++
Sbjct: 186 PNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDEVEQL 245

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           +  M+      DV+TY+ ++N +   G M+     F  M + G+  +   +S     + +
Sbjct: 246 VEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVDAFCK 305

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
           E    +A +L   M   G   N   +T +I G C  G +D AI + D+M   GV  N+ T
Sbjct: 306 EGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPLNVVT 365

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  L+ G  + R+   AE++L++M+  GV   +  +  L         +++A  +LS++K
Sbjct: 366 YTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLSEMK 425

Query: 521 NK 522
           NK
Sbjct: 426 NK 427



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 145/308 (47%), Gaps = 1/308 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++ L +  K  EA+ +   + + G + + + YTTL+    + K       ++S
Sbjct: 363 VVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGLLS 422

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++  G++ D   + A+I        ++EA     KM ESGL P    Y T++     +G
Sbjct: 423 EMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSG 482

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  E++ +L  +   G  +PN+ TY  L+   C   +I EA +  +KM   G+ P+V  Y
Sbjct: 483 KVPEAIAMLQKILDSG-FQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAY 541

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     +NG  ++A ++  EM H G+  +      ++ GY K+G + +A      M +
Sbjct: 542 TALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMID 601

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  +L  +   I GF  +       EV + M    + PD   Y+ +++ +   G +++
Sbjct: 602 SGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEE 661

Query: 372 CKEIFDDM 379
              + D+M
Sbjct: 662 AISLQDEM 669



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/200 (25%), Positives = 99/200 (49%), Gaps = 1/200 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +M++  + GK  EA A+   +++ G +P+++TY  L+  L      +   S  +++ +
Sbjct: 472 TTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRD 531

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+DP+   + A+++   ++G + EA+  F +M   G++     Y  L+ GY   G   +
Sbjct: 532 LGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHD 591

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  L   M   G ++ +L  Y   +  +CN   + EA  V  +M   G+ PD   YN + 
Sbjct: 592 AFALKAKMIDSG-LQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLI 650

Query: 256 TAYAQNGEADQAEEVIVEME 275
           + Y + G  ++A  +  EME
Sbjct: 651 SKYQKLGNLEEAISLQDEME 670



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/134 (29%), Positives = 64/134 (47%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++ T L++ L + G   EA  +FN ++  G     V YT LL     Q   +   ++ +
Sbjct: 538 VQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKA 597

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ ++G+  D   +   I+ F     M EA + F +M   G+ P  + YN LI  Y   G
Sbjct: 598 KMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLG 657

Query: 192 KPEESVKLLDLMSR 205
             EE++ L D M R
Sbjct: 658 NLEEAISLQDEMER 671


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 226/468 (48%), Gaps = 16/468 (3%)

Query: 24  VKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLI 83
           + + WG+    K+++   ++++    K   S+P              ++   +K+++ + 
Sbjct: 33  ISRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLP------------SIVDFSKVLSKIA 80

Query: 84  ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
           +        ++F+++   G    L +Y  ++  L    RF    S++ ++ + G +PD +
Sbjct: 81  KSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVV 140

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
             +++IN F +   + +A+D   KM+E G  P    YNT+I G    G   ++V+L D M
Sbjct: 141 TVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRM 200

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            R+G V+ +  TYN LV   C     ++A  +M  M    + P+V+T+  +   + + G+
Sbjct: 201 ERDG-VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGK 259

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
             +A ++  EM    V P+  T   +I+G C  G++ EA +    M   G  P++V +N 
Sbjct: 260 FSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNT 319

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           LI GF +    D   ++   M +  +  D ITY+TI+  +  AG  D  +EIF  M    
Sbjct: 320 LINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDS-- 377

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
            +P+   YSIL  G       EKA  L   M +S    ++  +  +I G C  G+++ A 
Sbjct: 378 -RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAW 436

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           ++F  +   G+ P++ ++ T++ G+   RQ  +++ + + M+  G+ P
Sbjct: 437 DLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 89/393 (22%), Positives = 175/393 (44%), Gaps = 74/393 (18%)

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           S F+    +    S N+EE +D F KM +S   P+   ++ ++     +   +  + L  
Sbjct: 34  SRFWGRTFSTKRSSMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFH 93

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M   G +  +L +YN+++   C       A +V+ KM   G +PDVVT +++       
Sbjct: 94  HMEVCG-IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSL------- 145

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
                                       I+G+C+  ++ +A+     M+E G  P++VI+
Sbjct: 146 ----------------------------INGFCQGNRVFDAIDLVSKMEEMGFRPDVVIY 177

Query: 322 NLLIKGFVEI------------MDRDGV--------------------DEVLALMKEF-- 347
           N +I G  +I            M+RDGV                     +   LM++   
Sbjct: 178 NTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVM 237

Query: 348 -RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             + P+VIT++ +++ +   G   +  +++++M +  + PD   Y+ L  G       ++
Sbjct: 238 RDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDE 297

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A+++L  M+  G  P+VV + T+I+G+C    +D   ++F +M + G+  +  T+ T++ 
Sbjct: 298 AKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQ 357

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           GY +A +P  A+EI   M +    P   T+ +L
Sbjct: 358 GYFQAGRPDAAQEIFSRMDS---RPNIRTYSIL 387



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 96/207 (46%)

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++V F+ ++    +  + D V  +   M+   +  D+ +Y+ ++N             +
Sbjct: 67  PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
              M K G +PD    S L  G+ +      A +L+  M E GF P+VVI+ TII G C 
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G ++ A+E+FD+M   GV  +  T+ +L+ G   + +   A  +++ M    + P   T
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNK 522
           F  + +     G   EA ++  ++  +
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRR 273



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/178 (23%), Positives = 84/178 (47%)

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           ++   M + R  P ++ +S +++  + +   D    +F  M   GI  D ++Y+I+    
Sbjct: 55  DLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCL 114

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            R      A  ++  M++ G+ P+VV  +++I+G+C    +  AI++  KM E G  P++
Sbjct: 115 CRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDV 174

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
             + T++ G  +      A E+   M+  GV     T+  L      +G   +A R++
Sbjct: 175 VIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLM 232


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 108/425 (25%), Positives = 207/425 (48%), Gaps = 1/425 (0%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           FN ++     P ++ +  +L +L   K +  +  +  ++E +G+  + I  N +IN++  
Sbjct: 37  FNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCH 96

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
              +  A   F K+ + G  P   TY TLI+G  + G+ +ES+   D +  +G +K +  
Sbjct: 97  LRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG-IKLDHV 155

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           +Y  L+   C       A  ++ K+     +PDVV YNTI     ++     A ++  EM
Sbjct: 156 SYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEM 215

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
               V PN  T   +I G+C  G++ +A      M    V+PN+  FN L+ G  +    
Sbjct: 216 FEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKM 275

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
                ++A+M +  V PDV TY+ +M+ +       K K +F+ M + G+  D H+YS++
Sbjct: 276 REAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVM 335

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G  + +  ++A +L   M      P+VV ++++I G C  G ++ A++  D+M + G 
Sbjct: 336 ISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQ 395

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            PN+ T+ +L+    ++ Q  +A  +L+ +K  G+     T+ +L +     G   +A++
Sbjct: 396 PPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQK 455

Query: 515 ILSKI 519
           +   +
Sbjct: 456 VFQDL 460



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 227/459 (49%), Gaps = 3/459 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           K++ SL++         +F  +   G + + +T   L+ +    ++ NS  S+ +++ + 
Sbjct: 54  KILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNILINSYCHLRQINSAFSVFAKILKL 113

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  PD I +  +I     +G ++E+++   ++   G+     +Y TLI G    G+   +
Sbjct: 114 GYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPA 173

Query: 197 VKLLDLMSREGNV-KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++LL  +  EG + +P++  YN ++   C +K + +A+++  +M    + P+VVTY ++ 
Sbjct: 174 LRLLRKI--EGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLI 231

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             +   G+ D+A  ++ EM    V PN  T   ++ G CKEGK++EA      M + GV 
Sbjct: 232 YGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVG 291

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++  +N L+ G+  + +      V  +M +  V  DV +YS +++  S    +D+  ++
Sbjct: 292 PDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDL 351

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F+ M    + PD  AYS L  G  +      A + +  M + G  PNV+ +T++I   C 
Sbjct: 352 FEGMRNENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCK 411

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              +D+AI +  K+ + G+  N+ T+  L+ G  +  +   A+++ Q +   G +    T
Sbjct: 412 SHQVDKAIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVT 471

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI 534
           + ++        L  EA  +LSK+++K    +  A E I
Sbjct: 472 YSIMINGLCKESLFDEALTLLSKMEDKGCVPDAIAYETI 510



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 208/413 (50%), Gaps = 1/413 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T L+  L   G+ +E+    + L+  G K   V+Y TL+  L    +      ++ 
Sbjct: 119 IITYTTLIRGLCLNGQVKESLNFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLR 178

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++E     PD + +N +I+   +   + +A D + +M E  + P   TY +LI G+ I G
Sbjct: 179 KIEGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVG 238

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +++  LL+ M  + NV PN+ T+N LV   C E  + EA +++  M   G+ PDV TY
Sbjct: 239 QLDKAFGLLNEMVLK-NVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTY 297

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y    EA +A+ V   M   GV  +  +  ++ISG  K   + EA+     M+ 
Sbjct: 298 NALMDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRN 357

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             V P++V ++ LI G  +    +   + +  M +    P+VITY+++++A   +  +DK
Sbjct: 358 ENVIPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDK 417

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +   +   GI+ + + Y+IL  G  ++     A+++   ++  G + +VV ++ +I+
Sbjct: 418 AIALLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMIN 477

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           G C +   D A+ +  KM + G  P+   +ET++  + E     +AE++L+ M
Sbjct: 478 GLCKESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREM 530



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/339 (21%), Positives = 147/339 (43%), Gaps = 37/339 (10%)

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           N+ +A +  ++M      P ++ +  I  +  +         +   ME +G+Q N  T  
Sbjct: 29  NLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLN 88

Query: 288 IIISGYCKEGKIKEALR-FARTMKEYGVHPNLVIFNLLIKGF---------VEIMDR--- 334
           I+I+ YC   +I  A   FA+ +K  G  P+++ +  LI+G          +   DR   
Sbjct: 89  ILINSYCHLRQINSAFSVFAKILK-LGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVS 147

Query: 335 --------------DGVDEV------LALMKEFR---VNPDVITYSTIMNAWSTAGFMDK 371
                         +G+ ++      L L+++       PDV+ Y+TI++       +  
Sbjct: 148 QGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRD 207

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             +++ +M +  + P+   Y+ L  G+    + +KA  LL  M+    +PNV  F T++ 
Sbjct: 208 AFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTFNTLVD 267

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C +G M  A  +   M + GV P++ T+  LM GY   ++  +A+ +  IM   GV  
Sbjct: 268 GLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQMGVTC 327

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEA 530
              ++ ++        +  EA  +   ++N+    ++ A
Sbjct: 328 DVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVA 366


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 214/418 (51%), Gaps = 7/418 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++T L+  L   GK +EA    +++I  G     V+Y TL+  L       +   ++ ++
Sbjct: 136 TITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKI 195

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +   + P+ + +N +I++  +   +  A D   +M    + P   TY TLI G  I G+ 
Sbjct: 196 DGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRL 255

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+V L + M  + N+KP++ T+N+LV   C E  + +A NV+  M   G+  ++VTYN+
Sbjct: 256 KEAVGLFNQMLLK-NIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNS 314

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    + ++A  V   M   GV P+ ++  I+I+G CK   + EA+   + M    
Sbjct: 315 LMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKS 374

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF--RVNP-DVITYSTIMNAWSTAGFMD 370
           + PN V +N LI G   ++    + +   L+ E   R  P DVITYS++++A      +D
Sbjct: 375 MAPNTVTYNSLIDG---LLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVD 431

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K   +   +   GI+P+ + Y+IL  G  +    + A+ +   ++  G+H +V ++  ++
Sbjct: 432 KAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMV 491

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +G C +G  D A+ +  KM ++G  P+  T+ETL+    E  +  +A ++L+ M   G
Sbjct: 492 NGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 201/446 (45%), Gaps = 34/446 (7%)

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK 169
           +  +L++L     F++  S   Q+E   + PD   FN +IN F   G++  A     K+ 
Sbjct: 67  FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN--------------------- 208
           + G  P T T  TLIKG  + GK  E++   D +  +G                      
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186

Query: 209 -------------VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
                        V+PN+  YN ++ + C +K +  A ++  +M    + PDVVTY T+ 
Sbjct: 187 AALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
                 G   +A  +  +M    ++P+  T  I++ G CKEG++K+A      M + GV 
Sbjct: 247 YGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVD 306

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            N+V +N L+ G+  +   +    V   M    V PDV +YS ++N       +D+   +
Sbjct: 307 SNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNL 366

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F +M    + P+   Y+ L  G ++      A +L+  M   G   +V+ +++++   C 
Sbjct: 367 FKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCK 426

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +  +D+AI +  K+ + G+ PN+ T+  L+ G  +  +   A+ + Q +   G H     
Sbjct: 427 NHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKM 486

Query: 496 FLLLAEARRATGLTKEAKRILSKIKN 521
           + ++       GL  EA  ++SK+++
Sbjct: 487 YNVMVNGLCKEGLFDEALSLVSKMED 512



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 162/314 (51%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           ++P+L T+N+L+  +C+  ++  A++V+ K+   G  PD VT  T+      NG+  +A 
Sbjct: 95  IQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREAL 154

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
               ++   G   +  + G +I+G CK G+ + AL+  R +    V PN+V++N +I   
Sbjct: 155 HFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSL 214

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +        ++ + M   R+ PDV+TY+T++      G + +   +F+ M    IKPD 
Sbjct: 215 CKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDV 274

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
           + ++IL  G  +E E +KA  +L  MI+ G   N+V + +++ G+      ++A  VF+ 
Sbjct: 275 YTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNT 334

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M   GV+P+++++  ++ G  + +    A  + + M +  + P   T+  L +     G 
Sbjct: 335 MARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGR 394

Query: 509 TKEAKRILSKIKNK 522
             +A  +++++ N+
Sbjct: 395 ISDAWDLVNEMHNR 408



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 168/328 (51%), Gaps = 9/328 (2%)

Query: 60  CSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           CS  + K     V + T L+   +  G+ +EA  +FN ++    KP + T+  L+  L  
Sbjct: 227 CSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCK 286

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
           +       ++++ + + G+D + + +N++++ +       +A   F  M   G+TP   +
Sbjct: 287 EGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQS 346

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           Y+ +I G       +E+V L   M  + ++ PN  TYN L+        I++AW+++++M
Sbjct: 347 YSIMINGLCKTKMVDEAVNLFKEMHSK-SMAPNTVTYNSLIDGLLKYGRISDAWDLVNEM 405

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
              G   DV+TY+++  A  +N + D+A  +I +++  G+QPN  T  I++ G CK G++
Sbjct: 406 HNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRL 465

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV-DEVLALMKEFRVN---PDVIT 355
           K+A    + +   G H ++ ++N+++ G      ++G+ DE L+L+ +   N   PD +T
Sbjct: 466 KDAQAVYQDLLIKGYHLDVKMYNVMVNGLC----KEGLFDEALSLVSKMEDNGCIPDAVT 521

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           Y T++ A       DK  ++  +M   G
Sbjct: 522 YETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 74/307 (24%), Positives = 138/307 (44%)

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           +N ++ +     +   A +   +M    ++PD+ T+N +   +   G  + A  V+ ++ 
Sbjct: 67  FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
             G  P+  T   +I G C  GK++EAL F   +   G H + V +  LI G  +  +  
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
              +VL  +    V P+V+ Y+TI+++      +    ++  +M    I PD   Y+ L 
Sbjct: 187 AALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G +     ++A  L   M+     P+V  F  ++ G C +G M +A  V   M + GV 
Sbjct: 247 YGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVD 306

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
            N+ T+ +LM GY   +Q  +A  +   M   GV P   ++ ++      T +  EA  +
Sbjct: 307 SNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNL 366

Query: 516 LSKIKNK 522
             ++ +K
Sbjct: 367 FKEMHSK 373



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/381 (23%), Positives = 172/381 (45%), Gaps = 7/381 (1%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           FN ++++  +  +   A+    +M+   + P   T+N LI  +   G    +  +L  + 
Sbjct: 67  FNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGHLNFAFSVLAKIF 126

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           + G   P+  T   L++  C    + EA +    + A G   D V+Y T+     + GE 
Sbjct: 127 KLG-FHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGET 185

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
             A +V+ +++   VQPN      II   CK+  +  A      M    + P++V +  L
Sbjct: 186 RAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTL 245

Query: 325 IKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           I G + I+ R  + E + L  +     + PDV T++ +++     G M K + +   M K
Sbjct: 246 IYGCL-IVGR--LKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIK 302

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G+  +   Y+ L  GY   ++  KA  +  TM   G  P+V  ++ +I+G C    +D 
Sbjct: 303 QGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDE 362

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A+ +F +M    ++PN  T+ +L+ G  +  +   A +++  M   G      T+  L +
Sbjct: 363 AVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLD 422

Query: 502 ARRATGLTKEAKRILSKIKNK 522
           A        +A  +++KIK++
Sbjct: 423 ALCKNHQVDKAITLITKIKDQ 443



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/137 (24%), Positives = 68/137 (49%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+++L +  +  +A  +   + + G +P++ TYT L+  L    R     ++  
Sbjct: 414 VITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQ 473

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G   D   +N ++N   + G  +EA+    KM+++G  P   TY TL++      
Sbjct: 474 DLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFEND 533

Query: 192 KPEESVKLLDLMSREGN 208
           K +++VKLL  M  +G+
Sbjct: 534 KNDKAVKLLREMIVQGS 550


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 126/415 (30%), Positives = 202/415 (48%), Gaps = 10/415 (2%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE------ENGMDP 140
           +P     IFN +     +P+L+T  TLL AL    R NS HS++   E      + G+ P
Sbjct: 153 QPHLGHQIFNKMKRLRFRPNLLTCNTLLNALV---RSNSSHSLVFSREVFQDAVKLGVQP 209

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           +   FN +I+ +    N EEA+    +M E G  P   TYNT++       +  +   LL
Sbjct: 210 NVNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLL 269

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
             M   G + PN  TYN+LV  +C  K + EA  V+  M   GM PDV TYNT+      
Sbjct: 270 LQMKNSG-LFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCD 328

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
            G+ D+A  +  +ME   + P+  T   +I G  +      A +    MK  GV  N V 
Sbjct: 329 EGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVT 388

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
            N++IK F      D    V+  M E   +PD  TY+T++N +  AG M +  ++ D+MG
Sbjct: 389 HNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMG 448

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
           + G+K D    + L      E++ + A  L M   + G+  + V + T+I G+  D   D
Sbjct: 449 RKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQAD 508

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           RA++++++M E G+   + T+ T++ G   + +  +A + L  +   G+ P +ST
Sbjct: 509 RALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDEST 563



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/498 (23%), Positives = 232/498 (46%), Gaps = 36/498 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++        +EA  + N + E G  P  VTY T+L AL  + +   +  ++ 
Sbjct: 211 VNTFNILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLL 270

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q++ +G+ P+   +N +++ + +   ++EA +    M   G+ P   TYNT+++G    G
Sbjct: 271 QMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEG 330

Query: 192 KPEESVKLLDLMS----------------------------------REGNVKPNLRTYN 217
           K +E+V+L D M                                   +   VK N  T+N
Sbjct: 331 KIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHN 390

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           ++++ +C E  I EA NVM KM  SG  PD  TYNT+   Y + G+  +A +++ EM   
Sbjct: 391 IMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRK 450

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G++ +  T   ++   C E ++ +A       ++ G   + V +  LI G+ +    D  
Sbjct: 451 GLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRA 510

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            ++   MKE  +   +ITY+TI+     +G  D+  +  +++ + G+ PD    +I+  G
Sbjct: 511 LKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHG 570

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           Y  E   EKA +    M+E    P++     ++ G C +G +++ + +F+     G   +
Sbjct: 571 YCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMD 630

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
             T+  ++  + + R+   A +++  M+   + P + T+  +       G T+EA+++  
Sbjct: 631 TVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKL-- 688

Query: 518 KIKNKERTNEMEAEEDIP 535
            +K  E+  +++ ++  P
Sbjct: 689 ALKFAEKGQQVKTQDTSP 706



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 114/432 (26%), Positives = 209/432 (48%), Gaps = 45/432 (10%)

Query: 50  KPTDSQPQTHCSFCMNKES------CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH 103
           KP  SQP+T  SF    +S        + + +  L+  L+ R K  +A+++  N I   H
Sbjct: 61  KPLHSQPETLLSFFKWFQSNAHSSLIHSPKPLLTLLPPLLSRRKFSDAKSLLLNFISSDH 120

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
                               +S+H+ + + +     P     +  + A+  S        
Sbjct: 121 P------------------HHSLHAHLLRSDHTIPKP---LLDTSLAAYVISKQPHLGHQ 159

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG-------NVKPNLRTY 216
            F KMK     P   T NTL+     +      V      SRE         V+PN+ T+
Sbjct: 160 IFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLV-----FSREVFQDAVKLGVQPNVNTF 214

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N+L+  +C++ N  EA  ++++M   G  PD VTYNT+ TA  +  +  Q  +++++M++
Sbjct: 215 NILIHGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKN 274

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
           +G+ PN  T  I++ GYCK   +KEA      M   G+ P++  +N +++G   + D   
Sbjct: 275 SGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRG---LCDEGK 331

Query: 337 VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
           +DE + L   M+ F++ PDV+TY+T+++        D   ++ ++M   G+K +   ++I
Sbjct: 332 IDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNI 391

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           + K +  E + ++A  +++ M+ESGF P+   + T+I+G+C  G M  A ++ D+M   G
Sbjct: 392 MIKWFCTEGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKG 451

Query: 454 VSPNLKTFETLM 465
           +  +  T  TL+
Sbjct: 452 LKLDTFTLNTLL 463



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 151/341 (44%), Gaps = 41/341 (12%)

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           +L+  +  +  P  S+    L S     KP L T    + A+   K       + +KM  
Sbjct: 110 SLLLNFISSDHPHHSLHAHLLRSDHTIPKPLLDTS---LAAYVISKQPHLGHQIFNKMKR 166

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQ---AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
              +P+++T NT+  A  ++  +     + EV  +    GVQPN  T  I+I GYC +  
Sbjct: 167 LRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILIHGYCSDNN 226

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
            +EALR    M EYG  P                                   D +TY+T
Sbjct: 227 TEEALRLINQMGEYGCCP-----------------------------------DNVTYNT 251

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++ A      + + +++   M  +G+ P+ + Y+IL  GY + +  ++A E++  M   G
Sbjct: 252 VLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVIELMTGKG 311

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P+V  + T++ G C +G +D A+ + DKM    + P++ T+ TL+ G  E R    A 
Sbjct: 312 MLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAF 371

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           ++++ MKA GV     T  ++ +     G   EA  ++ K+
Sbjct: 372 KLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKM 412



 Score =  102 bits (253), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/256 (25%), Positives = 128/256 (50%), Gaps = 14/256 (5%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           +   A  ++  + E G   +++TY T++  L +  + +     ++++ E G+ PD    N
Sbjct: 506 QADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSN 565

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I+ +   G +E+A     KM E  L P   T N L++G    G  E+ + L +    +
Sbjct: 566 IIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISK 625

Query: 207 GNVKP-NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           G  KP +  TYN+++ ++C E+ + +A+++M +M    ++PD  TYN I T   + G  +
Sbjct: 626 G--KPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTE 683

Query: 266 QAEEVIVEMEHNGVQ-------PNGRTCGII----ISGYCKEGKIKEALRFARTMKEYGV 314
           +AE++ ++    G Q       P   T  ++    IS  C +GK K+A++  +  ++ GV
Sbjct: 684 EAEKLALKFAEKGQQVKTQDTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGV 743

Query: 315 HPNLVIFNLLIKGFVE 330
             N   +  L+ G ++
Sbjct: 744 SLNKYTYIKLMDGLLK 759


>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 730

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 205/426 (48%), Gaps = 2/426 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR-FNSIHSIM 130
           V + T L+++L    K +EA   F  + E G +PSLVTY  ++     + R + +I  + 
Sbjct: 117 VYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWENILELF 176

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++  G+ PD   +N  I A +     EEA + F +MK S  TP   TYN L+  YG A
Sbjct: 177 EEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLDVYGKA 236

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E+  +L  M   G + PN+ TYN L+ A+        A  +   M + G++PDV T
Sbjct: 237 GWYNEAANVLKEMESAGCL-PNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFT 295

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y ++ +AY++ G+ +QA E+  +M  +   PN  T   +I  + K     E +     M+
Sbjct: 296 YTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQ 355

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             GV P++V +N L+  F +      V +V   MK+    PD  T++ ++ A+   G  D
Sbjct: 356 ACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSD 415

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   I+D M +AG  PD   ++ L     RE   E AE +L  +  S + PN + + +++
Sbjct: 416 QALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASML 475

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
             + + G +++  E+ D +    V       +T +  YS+      AE+    M+  G  
Sbjct: 476 HAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYL 535

Query: 491 PQKSTF 496
              STF
Sbjct: 536 SDTSTF 541



 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 218/457 (47%), Gaps = 11/457 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +  +L+++    G    A  + ++++  G +P + TYT+LL+A +   +      I +
Sbjct: 258 IVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYN 317

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+  +   P+S  FNA+I    ++ N  E M  F  M+  G+ P   T+N+L+  +G  G
Sbjct: 318 QMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNG 377

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E +K+   M + G  +P+  T+N+L+ A+    +  +A ++   M  +G  PD+ T+
Sbjct: 378 MYSEVLKVFRGMKKAG-FEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATF 436

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+  A A+ G  + AE ++ E+  +  +PN      ++  Y   G++++      T+  
Sbjct: 437 NTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTL-- 494

Query: 312 YGVHPNLVIFN-LLIKGFVEIMDR----DGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
              H   V F  +L+K FV +  +    D  ++    M+      D  T++ +++ +   
Sbjct: 495 ---HTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKK 551

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G MDK  + F  +   G++PD   Y+ L   Y RE    K E  L   + +G  P++V +
Sbjct: 552 GMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSY 611

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            T+I  +   G +  A  +F +M  +G+ P+  T+ T +  Y        A  +++ M  
Sbjct: 612 NTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHK 671

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            G  P + T+  L +A    G  +E +RIL  IK+ +
Sbjct: 672 TGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSD 708



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 202/429 (47%), Gaps = 1/429 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+++    GK ++A  I+N +      P+  T+  L+      K F+ +  I  
Sbjct: 293 VFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFE 352

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++  G++PD + +N+++ AF ++G   E +  F  MK++G  P  +T+N LI+ YG  G
Sbjct: 353 DMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCG 412

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++++ + D M + G   P+L T+N L+ A   E     A  ++ ++  S  KP+ + Y
Sbjct: 413 SSDQALSIYDGMLQAG-CTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAY 471

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++  AYA  GE ++ +E++  +    V          +  Y K   + EA      M+ 
Sbjct: 472 ASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRH 531

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           +G   +   FN +I  + +    D   +  AL++   + PDV+TY+ +M  +   G   K
Sbjct: 532 HGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRK 591

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
           C+    +   AG  PD  +Y+ +   Y +  +   A  +   M+ +G  P+   + T + 
Sbjct: 592 CEATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVG 651

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            + + G    A+ V   M + G  P+  T+ TL+  Y +  +    E IL+ +K+   + 
Sbjct: 652 CYVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEEVERILKFIKSSDPNF 711

Query: 492 QKSTFLLLA 500
            K+ +  +A
Sbjct: 712 SKAAYRRIA 720



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 206/447 (46%), Gaps = 3/447 (0%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEG-GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +  +M  L   G+  +A  +FN + +    +P  VT   +L  L  + +  ++  +   +
Sbjct: 49  LLSIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSL 108

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E G   D   + ++I+A S +   +EA+  F +MKE+G  P+  TYN +I  YG  G+ 
Sbjct: 109 REEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRS 168

Query: 194 EESV-KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            E++ +L + M  +G ++P+  TYN  + A  +     EA  +  +M +S   PD VTYN
Sbjct: 169 WENILELFEEMKAQG-IQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYN 227

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +   Y + G  ++A  V+ EME  G  PN  T   ++S + + G    A     +M   
Sbjct: 228 ALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSK 287

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ P++  +  L+  +      +   E+   M+     P+  T++ ++          + 
Sbjct: 288 GIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEM 347

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             IF+DM   G++PD   ++ L   + +     +  ++   M ++GF P+   F  +I  
Sbjct: 348 MVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEA 407

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +   GS D+A+ ++D M + G +P+L TF TL+   +   +   AE IL  +      P 
Sbjct: 408 YGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPN 467

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKI 519
              +  +  A    G  ++ K ++  +
Sbjct: 468 DIAYASMLHAYANGGELEKLKEMVDTL 494



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 188/400 (47%), Gaps = 6/400 (1%)

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           +++KG G  G+  +++++ + M +  N +P+  T  V++R    E  +T    +   +  
Sbjct: 51  SIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLRE 110

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G   DV  Y ++ +A ++N +  +A     +M+  G QP+  T  +II  Y K+G+  E
Sbjct: 111 EGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWE 170

Query: 302 -ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
             L     MK  G+ P+   +N  I         +   E+   MK     PD +TY+ ++
Sbjct: 171 NILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALL 230

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           + +  AG+ ++   +  +M  AG  P+   Y+ L   + R      A E+  +M+  G  
Sbjct: 231 DVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIE 290

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+V  +T+++S +   G +++A+E++++M     +PN  TF  L+  + + +       I
Sbjct: 291 PDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVI 350

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLE 540
            + M+A GV P   T+  L  A    G+  E  ++   +K K      +A  +I +E+  
Sbjct: 351 FEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMK-KAGFEPDKATFNILIEAYG 409

Query: 541 RLYHKEATTASYPNLLQ---IPNVVSSDQKGSAAALKKGR 577
           R    +   + Y  +LQ    P++ + +   +A A ++GR
Sbjct: 410 RCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALA-REGR 448



 Score = 43.5 bits (101), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 22/98 (22%), Positives = 43/98 (43%)

Query: 63  CMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           CM       + S   ++ S  + G+   A  IF+ ++  G +P   TY T +        
Sbjct: 599 CMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGM 658

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
           F    S++  + + G  PD + +  +++A+ + G  EE
Sbjct: 659 FPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEE 696


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 202/401 (50%), Gaps = 8/401 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++T LM  L  +G+  EA  ++++ +  G     V Y TL+  L    +      ++ ++
Sbjct: 128 TLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKM 187

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+ G+ P+ I +N V++   + G + EA     +M   G+     TYN+LI G+  AG+ 
Sbjct: 188 EKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQF 247

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + +V+LL+ M  + +V+P++ T+N+LV A C    + EA NV   M   G++PDVV+ N 
Sbjct: 248 QGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNA 307

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +   G   +A+EV   M   G  PN  +   +I+GYCK   + EALR    M +  
Sbjct: 308 LMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRN 367

Query: 314 VHPNLVIFNLLIKGFVE----IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           + P+ V +N L+ G  +    + + D V+     M+     PD+ITY+ +++ +     +
Sbjct: 368 LVPDTVTYNCLLDGLSKSGRVLYEWDLVEA----MRASGQAPDLITYNVLLDDYLKRECL 423

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           DK   +F  +   GI P+   Y+IL  G  +    + A+E+   +   G  PN+  +  +
Sbjct: 424 DKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIM 483

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           I+G   +G +D A  +  +M + G  PN  TF+ L+    E
Sbjct: 484 INGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLE 524



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 212/439 (48%), Gaps = 3/439 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNL-IEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           ++ S+ KL++S+++        ++ ++L  +G  KPSLVT +  + +LT   +     S+
Sbjct: 54  SIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFSV 113

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           M+++ + G   D      ++      G   EA++ +      G +     Y TLI G   
Sbjct: 114 MAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLCK 173

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            GK  ++++LL  M + G V+PNL  YN++V   C E  +TEA  +  +M   G+  DV 
Sbjct: 174 MGKTRDAIELLRKMEK-GGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVF 232

Query: 250 TYNTIATAYAQNGEADQAEEVIVEM-EHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           TYN++   +   G+   A  ++ EM     V+P+  T  I++   CK G + EA      
Sbjct: 233 TYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGL 292

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M + G+ P++V  N L+ G+          EV   M E    P+VI+YST++N +     
Sbjct: 293 MIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKM 352

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D+   +  +M +  + PD   Y+ L  G  +        +L+  M  SG  P+++ +  
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNV 412

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++  +     +D+A+ +F  + + G+SPN++T+  L+ G  +  +   A+EI Q++   G
Sbjct: 413 LLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKG 472

Query: 489 VHPQKSTFLLLAEARRATG 507
             P   T+ ++    R  G
Sbjct: 473 CRPNIRTYNIMINGLRREG 491



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 75/325 (23%), Positives = 157/325 (48%), Gaps = 2/325 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ-VEEN 136
           +++ L + G   EA  + + ++  G    + TY +L+       +F     ++++ V + 
Sbjct: 202 VVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKE 261

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            + PD   FN +++A  + G + EA + F  M + GL P   + N L+ G+ + G   E+
Sbjct: 262 DVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEA 321

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            ++ D M   G + PN+ +Y+ L+  +C  K + EA  ++ +M    + PD VTYN +  
Sbjct: 322 KEVFDRMVERGKL-PNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLD 380

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
             +++G      +++  M  +G  P+  T  +++  Y K   + +AL   + + + G+ P
Sbjct: 381 GLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISP 440

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N+  +N+LI G  +        E+  L+      P++ TY+ ++N     G +D+ + + 
Sbjct: 441 NIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALL 500

Query: 377 DDMGKAGIKPDAHAYSILAKGYVRE 401
            +M   G  P+A  +  L +  + +
Sbjct: 501 LEMVDDGFPPNAVTFDPLVRALLEK 525



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/192 (25%), Positives = 81/192 (42%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P ++T S  +N+ +  G M     +   + K G   D    + L KG   +    +A  L
Sbjct: 89  PSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNL 148

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
               +  GF  + V + T+I+G C  G    AIE+  KM + GV PNL  +  ++ G  +
Sbjct: 149 YDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCK 208

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEA 530
                 A  +   M   G+     T+  L       G  + A R+L+++  KE       
Sbjct: 209 EGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVY 268

Query: 531 EEDIPVESLERL 542
             +I V++L +L
Sbjct: 269 TFNILVDALCKL 280


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 231/485 (47%), Gaps = 35/485 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++   +G   +A +  + +   G  P +VTY TLL A   +       ++++++++ G
Sbjct: 216 LVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEG 275

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P    +N +++A++  G +++A +    M   G  P   TYN L  G   AGK +E+ 
Sbjct: 276 IAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 335

Query: 198 KLLDLMS-----------------------------------REGNVKPNLRTYNVLVRA 222
           KL D M                                    R+  VK +L T+N++V+ 
Sbjct: 336 KLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKG 395

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C E  + EA   +  M   G+ PDV+TYNT+  AY +     +A  ++ EM  +G++ +
Sbjct: 396 LCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMD 455

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   ++   CKE + +EA    R+  + G  P+ V +  ++  + +    +    +  
Sbjct: 456 TFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWD 515

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M + ++ P + TY+T++    T G + +  +  +++ K G+ PD   Y+I+   Y +E 
Sbjct: 516 EMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEG 575

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           + EKA +    M+E+ F P+VV   T+++G C  G +++AI++F+   E G   ++ T+ 
Sbjct: 576 DLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYN 635

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           TL+    +      A      M+A G+ P   T+ ++  A    G ++EA+ +L K+   
Sbjct: 636 TLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDES 695

Query: 523 ERTNE 527
            + +E
Sbjct: 696 GKLSE 700



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 222/427 (51%), Gaps = 21/427 (4%)

Query: 88  PQEAQAIFNNLIEGGH-KPSLVTYTTLLAAL------TIQKRFNSIHSIMSQVEENGMDP 140
           P  A  + ++    GH +PSL     +L+AL      + Q   +   S+++      + P
Sbjct: 153 PHLAAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIAL----RLHP 208

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           +   FN +++     G + +A+ T   M+  GL+P   TYNTL+K +   G   E+  LL
Sbjct: 209 NHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLL 268

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
             M +EG + P   TYN LV A+     I +A NV+  M A G +PD+ TYN +A    Q
Sbjct: 269 ARMKKEG-IAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQ 327

Query: 261 NGEADQAEEVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
            G+ D+A ++  EMEH + V P+  T   ++    K  +  +AL     M++ GV  +LV
Sbjct: 328 AGKVDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLV 387

Query: 320 IFNLLIKGFVEIMDRDG-VDEVLA---LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
             N+++KG      R+G ++E L    +M E  + PDVITY+T+++A+  A  + K   +
Sbjct: 388 THNIVVKGLC----REGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVL 443

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            D+M ++G+K D    + L     +E+  E+AEELL +  + GF P+ V + T+++ +  
Sbjct: 444 MDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFK 503

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +   + A+ ++D+M +  ++P++ T+ TL+ G     +   A + L  +   G+ P  +T
Sbjct: 504 ENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTT 563

Query: 496 FLLLAEA 502
           + ++  A
Sbjct: 564 YNIIIHA 570



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 220/439 (50%), Gaps = 5/439 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIER-GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M KE     R+    + S   R G  ++A  +   +   G +P L TY  L A L    +
Sbjct: 271 MKKEGIAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGK 330

Query: 123 FNSIHSIMSQVEENGM-DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
            +    +  ++E   +  PD + +N +++A  +     +A++   +M++ G+  +  T+N
Sbjct: 331 VDEAFKLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHN 390

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            ++KG    G+ EE++  L +M+ EG + P++ TYN L+ A+C  +N+ +A+ +M +M  
Sbjct: 391 IVVKGLCREGQLEEALGRLKMMTEEG-LAPDVITYNTLIDAYCKARNVAKAFVLMDEMVR 449

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
           SG+K D  T NT+     +    ++AEE++      G  P+  + G +++ Y KE K + 
Sbjct: 450 SGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEP 509

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD-RDGVDEVLALMKEFRVNPDVITYSTIM 360
           AL     M +  + P++  +N LIKG   I    + +D++  LMK+  V PD  TY+ I+
Sbjct: 510 ALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLV-PDDTTYNIII 568

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           +A+   G ++K  +  + M +   KPD    + L  G     + EKA +L  +  E G  
Sbjct: 569 HAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKK 628

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
            +V+ + T+I   C DG +D A+  F  M   G+ P+  T+  ++   SEA +   A+ +
Sbjct: 629 VDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNM 688

Query: 481 LQIMKAFGVHPQKSTFLLL 499
           L  +   G   ++ ++ L+
Sbjct: 689 LHKLDESGKLSERFSYPLI 707



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 100/393 (25%), Positives = 191/393 (48%), Gaps = 6/393 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L   G+ +EA      + E G  P ++TY TL+ A    +       +M ++  +G
Sbjct: 392 VVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D+   N ++    +    EEA +      + G  P   +Y T++  Y    KPE ++
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPAL 511

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L D MS+   + P++ TYN L++  C    +TEA + ++++   G+ PD  TYN I  A
Sbjct: 512 YLWDEMSKR-KLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHA 570

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G+ ++A +   +M  N  +P+  TC  +++G C  GK+++A++   +  E G   +
Sbjct: 571 YCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVD 630

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ +N LI+   +  D D      A M+   + PD  TY+ +++A S AG  ++ + +  
Sbjct: 631 VITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLH 690

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP---NVVIFTTIISGWC 434
            + ++G   +  +Y ++ K    E +  K  E + +  ESG +    +   +   +   C
Sbjct: 691 KLDESGKLSERFSYPLI-KSSAEEVKTGKDPE-VKSDCESGGNAKGGDQESYNKSVKELC 748

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             G +  A  V D+M + G+S +  T+ TLM G
Sbjct: 749 VGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEG 781



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/181 (24%), Positives = 82/181 (45%), Gaps = 10/181 (5%)

Query: 343 LMKEFR----VNPDVITYSTIMNAW--STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
           L+  FR    V P +   + +++A   S +       ++F  +    + P+ + +++L  
Sbjct: 159 LLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNLLVH 218

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
            +  +     A   L TM   G  P+VV + T++   C  G +  A  +  +M + G++P
Sbjct: 219 THCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAP 278

Query: 457 NLKTFETLMWGYSEARQPW--RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
              T+ TL+  Y  AR  W  +A  +++ M AFG  P   T+ +LA      G   EA +
Sbjct: 279 TRATYNTLVSAY--ARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFK 336

Query: 515 I 515
           +
Sbjct: 337 L 337


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 209/443 (47%), Gaps = 2/443 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L + LI+ G  +EA   F+ +      P   +   LL       + + +      +   G
Sbjct: 31  LFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAG 90

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P    +N +I+   + G++E A   F +MK  GL P T TYN++I G+G  G+ +++V
Sbjct: 91  AKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTV 150

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
              + M ++   +P++ TYN L+  +C    + +      +M  +G+KP+VV+Y+T+  A
Sbjct: 151 CFFEEM-KDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDA 209

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G   QA +  V+M   G+ PN  T   +I  YCK G + +A R A  M + GV  N
Sbjct: 210 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWN 269

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +  LI G     +      +L  M E  +   V+T+  +++       + K  + F 
Sbjct: 270 VVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFG 329

Query: 378 DMGKA-GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +    G++ +A  Y+ +  G  +  + E A  L   M + G  P+   +T+++ G    
Sbjct: 330 RISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQ 389

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G++  A+ + DKM E G+  +L  + +L+WG S   Q  +A   L+ M   G+HP +   
Sbjct: 390 GNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLC 449

Query: 497 LLLAEARRATGLTKEAKRILSKI 519
           + + +     G   EA  + S +
Sbjct: 450 ISVLKKHYELGCINEAVELQSYL 472



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/386 (24%), Positives = 182/386 (47%), Gaps = 2/386 (0%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           RS   L++   + GK    +  F ++I  G KP++ TY  ++  +  +    +   +  +
Sbjct: 61  RSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEE 120

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           ++  G+ PD++ +N++I+ F + G +++ +  F +MK+    P   TYN LI  +   GK
Sbjct: 121 MKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 180

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             + ++    M R G +KPN+ +Y+ LV A+C E  + +A      M   G+ P+  TY 
Sbjct: 181 LPKGLEFFREMKRNG-LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 239

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++  AY + G    A  +  EM   GV+ N  T   +I G C      E L     M E 
Sbjct: 240 SLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVEL 299

Query: 313 GVHPNLVIFNLLIKGFVE-IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            +   +V F +LI G  +  +    +D    +  +F +  +   Y+ +++       ++ 
Sbjct: 300 DIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEA 359

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F+ M + G+ PD  AY+ L  G  ++    +A  L   M+E+G   +++ +T+++ 
Sbjct: 360 ATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVW 419

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPN 457
           G      + +A    ++M   G+ P+
Sbjct: 420 GLSHCNQLQKARSFLEEMIGEGIHPD 445



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 177/376 (47%), Gaps = 2/376 (0%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           F+A+ +   + G +EEA+  F KMK   + P T + N L+  +   GK +   +    M 
Sbjct: 28  FDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMI 87

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
             G  KP + TYN+++   C E ++  A  +  +M   G+ PD VTYN++   + + G  
Sbjct: 88  GAG-AKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRL 146

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           D       EM+    +P+  T   +I+ +CK GK+ + L F R MK  G+ PN+V ++ L
Sbjct: 147 DDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTL 206

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           +  F +        +    M+   + P+  TY+++++A+   G +     + ++M + G+
Sbjct: 207 VDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGV 266

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           + +   Y+ L  G    + P +   LL  M+E      VV F  +I G C +  + +AI+
Sbjct: 267 EWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAID 326

Query: 445 VFDKMC-EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
            F ++  + G+  N   +  ++ G  +  Q   A  + + M   G+ P ++ +  L +  
Sbjct: 327 YFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGN 386

Query: 504 RATGLTKEAKRILSKI 519
              G   EA  +  K+
Sbjct: 387 FKQGNVLEALALRDKM 402



 Score =  149 bits (377), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 93/383 (24%), Positives = 185/383 (48%), Gaps = 2/383 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   +++ + + G  + A+ +F  +   G  P  VTY +++       R +      
Sbjct: 94  TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFF 153

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++++   +PD I +NA+IN F + G + + ++ F +MK +GL P   +Y+TL+  +   
Sbjct: 154 EEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKE 213

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  ++++K    M R G V PN  TY  L+ A+C   N+++A+ + ++M   G++ +VVT
Sbjct: 214 GMMQQAIKFYVDMRRVGLV-PNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVT 272

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR-FARTM 309
           Y  +           +   ++ EM    ++    T  ++I G CK   + +A+  F R  
Sbjct: 273 YTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRIS 332

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            ++G+  N  I+  +I G  +    +    +   M +  + PD   Y+++M+     G +
Sbjct: 333 NDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNV 392

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +   + D M + G+K D  AY+ L  G     + +KA   L  MI  G HP+ V+  ++
Sbjct: 393 LEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISV 452

Query: 430 ISGWCSDGSMDRAIEVFDKMCEH 452
           +      G ++ A+E+   + +H
Sbjct: 453 LKKHYELGCINEAVELQSYLMKH 475



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 101/404 (25%), Positives = 175/404 (43%), Gaps = 16/404 (3%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P    ++ L     +   + EA     KM    + P   + N +   +A+ G+ D  +  
Sbjct: 23  PGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 82

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             +M   G +P   T  I+I   CKEG ++ A      MK  G+ P+ V +N +I GF +
Sbjct: 83  FKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGK 142

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           +   D        MK+    PDVITY+ ++N +   G + K  E F +M + G+KP+  +
Sbjct: 143 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVS 202

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YS L   + +E   ++A +  + M   G  PN   +T++I  +C  G++  A  + ++M 
Sbjct: 203 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEML 262

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           + GV  N+ T+  L+ G      P     +L  M    +     TF +L +      L  
Sbjct: 263 QVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVS 322

Query: 511 EAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQ---IPN--VVSSD 565
           +A     +I N        A     ++ L +    EA T  +  + Q   +P+    +S 
Sbjct: 323 KAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSL 382

Query: 566 QKGSAAALKKGRML----LRD--ADSSLECSWFATTSMY--LSH 601
             G+    K+G +L    LRD   ++ ++    A TS+   LSH
Sbjct: 383 MDGN---FKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSH 423


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 211/406 (51%), Gaps = 6/406 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++L ERG+ ++A ++ ++++  G  P +VTY  LL A    + +     ++  +   G
Sbjct: 173 LIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEG 232

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+++ +N +++     G++++A++    +   G  P+T  YNT++KG   A +  ++ 
Sbjct: 233 CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDAD 292

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+  M RE N  PN  T+NV++ + C +  + +A  ++ KM+  G   ++VTYN I   
Sbjct: 293 ELVTEMLRE-NCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIING 351

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D A  ++ +M+  G +P+  T   ++ G C   +  +A      M + G  P+
Sbjct: 352 LCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPD 411

Query: 318 LVIFNLLIKGFV--EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            V FN LI GF+  + +  D + EV   M +    P+ ITYSTI++  + A  +D+  E+
Sbjct: 412 NVTFNTLI-GFLCQKGLMVDAI-EVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALEL 469

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F++MG  G  PD   Y +LA+    +   E+A + +  + +SG  P+ V++  I+ G C 
Sbjct: 470 FNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCR 528

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +G  + AI++   M   G  P+  T+  L+ G +       A E+L
Sbjct: 529 NGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL 574



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/482 (23%), Positives = 210/482 (43%), Gaps = 43/482 (8%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           +L+  L  RG+P +A+ +       G   ++V Y  L        R      ++  +   
Sbjct: 108 RLVRDLCRRGRPDDAERVVGAC---GPAATVVAYGALTDGYCRAGRLGDARRVVGGMP-- 162

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            + P++  +N +I+   E G + +A+     M   G  P   TYN L++         ++
Sbjct: 163 -VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQA 221

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++L+DLM  EG   PN  TYNVL+   C E ++ +A  ++  + + G KP  V YNT+  
Sbjct: 222 MELIDLMRAEG-CTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLK 280

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM------- 309
                     A+E++ EM      PN  T  ++I   C++G +++A++    M       
Sbjct: 281 GLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTA 340

Query: 310 ----------------------------KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
                                       K YG  P++V +N L+KG          +E++
Sbjct: 341 NIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELM 400

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M +    PD +T++T++      G M    E+F  M   G  P++  YS +  G  + 
Sbjct: 401 DNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKA 460

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            + ++A EL   M   GF+P+  I+  +      D +++ AI+   K+ + G+SP+   +
Sbjct: 461 TKLDQALELFNEMGHKGFNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLY 519

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             ++ G     +   A +I+  M + G  P   T+++L E     G   EA+ +L K+ +
Sbjct: 520 NAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCS 579

Query: 522 KE 523
           ++
Sbjct: 580 RD 581



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 187/431 (43%), Gaps = 43/431 (9%)

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
           + + +  VE +   PD+   N ++      G  ++A      +   G   T   Y  L  
Sbjct: 87  LDAALRLVESSPRPPDAALANRLVRDLCRRGRPDDAERV---VGACGPAATVVAYGALTD 143

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           GY  AG+  ++ +++  M     V+PN  TYN L+   C    + +A +V+  M   G  
Sbjct: 144 GYCRAGRLGDARRVVGGMP----VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCA 199

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PDVVTYN +  A  +     QA E+I  M   G  PN  T  +++ G C EG + +AL  
Sbjct: 200 PDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALEL 259

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP-------------- 351
            R +  +G  P+ V +N ++KG          DE++  M      P              
Sbjct: 260 LRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCR 319

Query: 352 ---------------------DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
                                +++TY+ I+N       +D    +   M   G KPD   
Sbjct: 320 KGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVT 379

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ L KG     +   AEEL+  M ++G  P+ V F T+I   C  G M  AIEVF +M 
Sbjct: 380 YNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMP 439

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           + G +PN  T+ T++ G ++A +  +A E+   M   G +P K  + LLAE        +
Sbjct: 440 DKGCTPNSITYSTIISGLAKATKLDQALELFNEMGHKGFNPDK-IYQLLAECLNDDDTIE 498

Query: 511 EAKRILSKIKN 521
           EA + + K+++
Sbjct: 499 EAIQTVRKLQD 509



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/374 (23%), Positives = 166/374 (44%), Gaps = 10/374 (2%)

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           ++A    G+++ A+     ++ S   P  +  N L++     G+P+++ +++        
Sbjct: 78  LSALVHRGDLDAALRL---VESSPRPPDAALANRLVRDLCRRGRPDDAERVVGACGPAAT 134

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V      Y  L   +C    + +A  V+  M    ++P+  TYN +     + G+   A 
Sbjct: 135 VV----AYGALTDGYCRAGRLGDARRVVGGMP---VQPNAYTYNPLIHTLCERGQVRDAL 187

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            V+ +M   G  P+  T  I++   CK    ++A+     M+  G  PN V +N+L+ G 
Sbjct: 188 SVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCTPNNVTYNVLMDGM 247

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
               D D   E+L  +      P  + Y+T++    +A       E+  +M +    P+ 
Sbjct: 248 CGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADELVTEMLRENCPPNE 307

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             ++++     R+   ++A +LL  M + G   N+V +  II+G C   ++D A+ +  K
Sbjct: 308 ATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSK 367

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M  +G  P++ T+ TL+ G   A Q   AEE++  M   G  P   TF  L       GL
Sbjct: 368 MKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGL 427

Query: 509 TKEAKRILSKIKNK 522
             +A  +  ++ +K
Sbjct: 428 MVDAIEVFKQMPDK 441



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/273 (28%), Positives = 135/273 (49%), Gaps = 8/273 (2%)

Query: 64  MNKESCRT-VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+K  C   + +   ++N L E+     A  + + +   G KP +VTY TLL  L    +
Sbjct: 333 MSKHGCTANIVTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQ 392

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +     +M  + +NG  PD++ FN +I    + G M +A++ F +M + G TP + TY+T
Sbjct: 393 WVDAEELMDNMTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYST 452

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G   A K +++++L + M  +G   P+ + Y +L     ++  I EA   + K+  S
Sbjct: 453 IISGLAKATKLDQALELFNEMGHKG-FNPD-KIYQLLAECLNDDDTIEEAIQTVRKLQDS 510

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P  V YN I     +NG+ + A +++  M  +G  P+  T  I+I G   EG + EA
Sbjct: 511 GISPHTVLYNAILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEA 570

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
                 +         V+ N LIK    ++D++
Sbjct: 571 RELLIKLCSRD-----VLVNSLIKSEALLLDQN 598


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 220/471 (46%), Gaps = 43/471 (9%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           LI  G+ +E       +   G  P +V  T L+       R  +   IM  +EE+G   D
Sbjct: 79  LIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVID 138

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           +  +N +INA+ +SG +EEA+     +  + + P  +TY+ ++      GK ++++++LD
Sbjct: 139 ANSYNVLINAYCKSGEIEEALRV---LDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLD 195

Query: 202 --LMS--------------------------------REGNVKPNLRTYNVLVRAWCNEK 227
             L S                                R    KP++ TYNVL++ +C E 
Sbjct: 196 RQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEG 255

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
            + EA   + K+ + G + DV+++N I  +    G    A +++  M   G  P+  T  
Sbjct: 256 RLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFN 315

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD---EVLALM 344
           I+I+  C++G + +AL     M ++G  PN   FN LI+GF    +R G+D   E L +M
Sbjct: 316 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFC---NRKGIDRAIEHLEIM 372

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
                 PD++TY+ ++ A    G +D    I   +   G  P   +Y+ +  G ++  + 
Sbjct: 373 VSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKA 432

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           E A ELL  M   G  P+++  T+++ G   +G +  AI+ F  +   G+ PN   + ++
Sbjct: 433 ELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSI 492

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           M G  +A+Q   A + L  M A G  P ++++  L +     GL +EA ++
Sbjct: 493 MMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKL 543



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 189/377 (50%), Gaps = 1/377 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ SL +RGK ++A  + +  ++    P +VT T L+ A   +        + +++   G
Sbjct: 177 VLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKG 236

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + +N +I  F + G ++EA+    K+   G      ++N +++     G+  +++
Sbjct: 237 CKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAM 296

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL  M R+G   P++ T+N+L+   C +  + +A NV+  M   G  P+  ++N +   
Sbjct: 297 KLLATMLRKGCF-PSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQG 355

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           +      D+A E +  M   G  P+  T  I+++  CK+GK+ +A+     +   G  P+
Sbjct: 356 FCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPS 415

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           L+ +N +I G +++   +   E+L  M    + PD+IT ++++   S  G + +  + F 
Sbjct: 416 LISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFH 475

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +   GIKP+A  Y+ +  G  + Q+   A + L+ M+ +G  P    +TT+I G   +G
Sbjct: 476 YLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEG 535

Query: 438 SMDRAIEVFDKMCEHGV 454
             + A ++ +++   G+
Sbjct: 536 LAEEASKLSNELYSRGL 552



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/257 (22%), Positives = 114/257 (44%), Gaps = 3/257 (1%)

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +NGE ++    +  M + G  P+   C  +I  +CK G+ K A R    ++E G   +  
Sbjct: 81  RNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDAN 140

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            +N+LI  + +  +   ++E L ++    V P+  TY  ++ +    G + +  ++ D  
Sbjct: 141 SYNVLINAYCKSGE---IEEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQ 197

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            ++   PD    ++L     +E    +A +L   M   G  P+VV +  +I G+C +G +
Sbjct: 198 LQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRL 257

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D AI    K+  +G   ++ +   ++       +   A ++L  M   G  P   TF +L
Sbjct: 258 DEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNIL 317

Query: 500 AEARRATGLTKEAKRIL 516
                  GL  +A  +L
Sbjct: 318 INFLCQKGLLGKALNVL 334



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 71/140 (50%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   +++ L++ GK + A  +   +   G KP L+T T+++  L+ + + +        +
Sbjct: 418 SYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYL 477

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +  G+ P++  +N+++    ++     A+D    M  +G  PT ++Y TLIKG    G  
Sbjct: 478 KGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLA 537

Query: 194 EESVKLLDLMSREGNVKPNL 213
           EE+ KL + +   G VK +L
Sbjct: 538 EEASKLSNELYSRGLVKKSL 557


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 223/453 (49%), Gaps = 3/453 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L++S  + GK Q+   + + +   G  P+ VTY  L+  L+ +  F     ++
Sbjct: 233 TIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLI 292

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G+   +  +N +I  +   G + EA+    +M   G +PT +TYN+ I G    
Sbjct: 293 GEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKL 352

Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           G+  ++++ L D+++   N+ P++ +YN L+  +C   N+ +A+ +  ++ +  + P +V
Sbjct: 353 GRMSDAMQQLSDMLA--NNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIV 410

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYNT+     + GE + A+++ VEM + G+ P+  T  I+++G CK G +  A  F   M
Sbjct: 411 TYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEM 470

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G+  +   +   I G +++ D      +   M      PD+I Y+ +++     G +
Sbjct: 471 LHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNL 530

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           ++  E+   M   G+ PD   Y+ +   ++      K  E+   M+  G  P+VV +T +
Sbjct: 531 EEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVL 590

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G    G ++RA   F +M E G+ PN+ T+ +L+ G  + R+  +A      M   G+
Sbjct: 591 IHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            P K ++ +L       G  +EA  +  ++ ++
Sbjct: 651 FPNKYSYTILINENCNMGNWQEALSLYKQMLDR 683



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 111/462 (24%), Positives = 223/462 (48%), Gaps = 13/462 (2%)

Query: 69  CRTVRSMTKLMNSLI----ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           C +     K+++ LI    ++   ++  ++F+ +I+    P +     +L  L  +   +
Sbjct: 157 CVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMS 216

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
               +   + E G+ P  + +N +++++ + G +++ +D   +M+  G  P   TYN LI
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G    G+ E++  L+  M + G +K +  TYN L+  + N+  + EA ++  +M   G 
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTG-LKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P V TYN+      + G    A + + +M  N + P+  +   +I GYC+ G + +A  
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFL 395

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN----PDVITYSTIM 360
               ++   + P +V +N L+ G      R G  EV   +K   +N    PD++TY+ ++
Sbjct: 396 LFDELRSIYLFPTIVTYNTLLDGLC----RQGELEVAQQLKVEMINEGIAPDIVTYTILV 451

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           N     G +   +E FD+M   G++ D++AY+    G ++  +  +A  L   M+  GF 
Sbjct: 452 NGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFP 511

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+++I+  ++ G C  G+++ A E+  KM   GV P+  T+ +++  + E  +  +  EI
Sbjct: 512 PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREI 571

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              M + G+ P   T+ +L       G  + A    S+++ K
Sbjct: 572 FYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEK 613



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/418 (27%), Positives = 193/418 (46%), Gaps = 1/418 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L ++G+ ++A+ +   +++ G K S  TY  L+     +       S+  ++   G
Sbjct: 275 LINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKG 334

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P    +N+ I    + G M +AM     M  + L P   +YNTLI GY   G   ++ 
Sbjct: 335 ASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAF 394

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L D + R   + P + TYN L+   C +  +  A  +  +M   G+ PD+VTY  +   
Sbjct: 395 LLFDEL-RSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNG 453

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G    A+E   EM H G++ +       I G  K G    A      M   G  P+
Sbjct: 454 SCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPD 513

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           L+I+N+++ G  ++ + +   E+L  M    V PD +TY++I++A    G + K +EIF 
Sbjct: 514 LIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFY 573

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G+ P    Y++L  G+  +   E+A      M E G  PNV+ + ++I+G C   
Sbjct: 574 EMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVR 633

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            MD+A   F +M E G+ PN  ++  L+           A  + + M   GV P   T
Sbjct: 634 RMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCT 691



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 91/339 (26%), Positives = 161/339 (47%), Gaps = 1/339 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L+      G   +A  +F+ L      P++VTY TLL  L  Q        +  
Sbjct: 374 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 433

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD + +  ++N   + G++  A + F +M   GL   +  Y T I G    G
Sbjct: 434 EMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLG 493

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               +  L + M  +G   P+L  YNV+V   C   N+ EA  ++ KM + G+ PD VTY
Sbjct: 494 DTSRAFSLQEEMLAKG-FPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            +I  A+ +NG   +  E+  EM   G+ P+  T  ++I G+  +G+++ A  +   M+E
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN++ +N LI G  ++   D      A M E  + P+  +Y+ ++N     G   +
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQE 672

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
              ++  M   G++PD+  +S L K   ++ + +   +L
Sbjct: 673 ALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQL 711



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 72/136 (52%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + T L++    +G+ + A   F+ + E G  P+++TY +L+  L   +R +  ++  
Sbjct: 583 SVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF 642

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++ E G+ P+   +  +IN     GN +EA+  + +M + G+ P + T++ L+K  G  
Sbjct: 643 AEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKD 702

Query: 191 GKPEESVKLLDLMSRE 206
            K +   +L  L+  E
Sbjct: 703 CKLQAVRQLESLLDSE 718


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/460 (25%), Positives = 210/460 (45%), Gaps = 39/460 (8%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           FN ++     PS V +  LL ++   K  +++ S+  Q++  G+ P+    + +IN+F  
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 155 --SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
              G + EA+  F KM   G  P   TY TLI G    G    +++LL  M ++ N +PN
Sbjct: 109 LNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQK-NCQPN 167

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
           +  YN ++ + C ++ +TEA+N+  +M   G+ PD+ TYN++  A     E      ++ 
Sbjct: 168 VFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLN 227

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGFVEI 331
           EM  + + P+  +   ++   CKEGK+ EA      M +  G  PN++ +N LI G+ +I
Sbjct: 228 EMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKI 287

Query: 332 MDRDG--------------------------------VDEVLALMKEFRVN---PDVITY 356
              D                                 + + +AL  E       P+++TY
Sbjct: 288 QRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTY 347

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
             +++      ++ +   +   +  + + PD    +I   G  R  E E A +L   +  
Sbjct: 348 RILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSS 407

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G  P+V  ++ +I+G C  G +D A ++F +M E+G + N   + T+  G+    +  R
Sbjct: 408 KGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSR 467

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           A ++LQ M A G     ST  L  +     GL +  K+IL
Sbjct: 468 AIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQIL 507



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 198/423 (46%), Gaps = 49/423 (11%)

Query: 72  VRSMTKLMNSL--IERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHS 128
           + ++  L+NS   + RGK  EA  +F+ +I  G +P +VTY TL+  L  +     +I  
Sbjct: 96  IYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRL 155

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           + S V++N   P+   +N +I++  +   + EA + F +M   G++P   TYN+LI    
Sbjct: 156 LGSMVQKN-CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 214

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA-SGMKPD 247
              + +    LL+ M  +  + P++ ++N +V A C E  +TEA +V+ KM    G  P+
Sbjct: 215 NLCEWKHVATLLNEMV-DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPN 273

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           V++YNT+   Y +    D+A  +  EM    + P+  T   +I G C   ++++A+    
Sbjct: 274 VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFH 333

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK---------EFRVN-------- 350
            M      PNLV + +L+    +      + E +AL+K         + +VN        
Sbjct: 334 EMVACSQIPNLVTYRILLDYLCK---NRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMC 390

Query: 351 ---------------------PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
                                PDV TYS ++N     G +D+  ++F +M + G   +  
Sbjct: 391 RAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGC 450

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI-EVFDK 448
            Y+ + +G++R  E  +A +LL  M+  GF  +    T  +     DG +D+++ ++   
Sbjct: 451 IYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDG-LDQSLKQILRD 509

Query: 449 MCE 451
            C+
Sbjct: 510 FCK 512



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/393 (24%), Positives = 173/393 (44%), Gaps = 14/393 (3%)

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +  N     S+ FN +          + A+ +F +M      P+T  +N L+        
Sbjct: 27  LSHNRFHSKSLHFNTI----------DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKH 76

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWC--NEKNITEAWNVMHKMAASGMKPDVVT 250
               + L   M   G + PN+ T ++L+ ++C  N   I EA ++  KM   G +PDVVT
Sbjct: 77  HSTLLSLSHQMDSFG-IPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVT 135

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+     + G    A  ++  M     QPN      II   CK+ ++ EA      M 
Sbjct: 136 YGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMV 195

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P++  +N LI     + +   V  +L  M + ++ PDV++++T+++A    G + 
Sbjct: 196 TKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVT 255

Query: 371 KCKEIFDDM-GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +  ++ D M  + G  P+  +Y+ L  GY + Q  +KA  L   M      P+ V ++T+
Sbjct: 256 EAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTL 315

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G C    +  AI +F +M      PNL T+  L+    + R    A  +L+ ++   +
Sbjct: 316 IHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNL 375

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            P      +  +     G  + A+ + S + +K
Sbjct: 376 DPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 408


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 202/438 (46%), Gaps = 23/438 (5%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C   V S + L++ L + G+  EA  ++  ++E    P LV YT+ +  L    R
Sbjct: 170 MAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANR 229

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD-----------------TF 165
                    ++   G   D++ F+ VI    + G+ EEA +                 TF
Sbjct: 230 VAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF 289

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS--REGNVKPNLRTYNVLVRAW 223
            +M      P+   +NTLI     + +  + V L   M   +E    PNL TYN++V   
Sbjct: 290 EEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNL 349

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C  K + EA  ++++MA  G+ PDVVTY+ +     + G+ D+A +++ EM   GV P+ 
Sbjct: 350 CKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDS 409

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T   I++   K GK+  AL    TMK  G  P+LV +N L+ G  +    D     LA 
Sbjct: 410 FTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAK 469

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M   +  PDV +Y+ I+ A   +G       IF +M K G+ PD   Y  L  G  R   
Sbjct: 470 MVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGL 529

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            + A ELL T   S   P+ V+   ++ G C  G  + A EV ++M + G   +  T+ +
Sbjct: 530 EDLALELLKT---SLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYIS 586

Query: 464 LMWGYSEARQPWRAEEIL 481
           ++ G  +  +  +A +++
Sbjct: 587 VVSGLRKLGKVDKARQLV 604



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 205/460 (44%), Gaps = 22/460 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L + G+  +A+ +   L E G K +++TY+ ++       R +    I   +   G
Sbjct: 79  VLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGG 138

Query: 138 -MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
              PD + FN+++        M EA   F  M ++G  P   +Y+TL+ G   AG+ +E+
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEA 198

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            +L + M  +  V P+L  Y   V   C    + EA +   KM   G K D V ++T+  
Sbjct: 199 CRLWEEMVEKSCV-PDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257

Query: 257 AYAQNGEADQAEEVIVE-----------------MEHNGVQPNGRTCGIIISGYCKEGKI 299
              + G A++A+  ++E                 M      P+      +I   CK  ++
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRL 317

Query: 300 KEA-LRFAR--TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
            +  L F R  +MKE+   PNL  +N+++    +    D   E++  M  + ++PDV+TY
Sbjct: 318 PDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTY 377

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           S +++     G +D+  ++ ++M K G+ PD+   + +     +  + + A   L TM  
Sbjct: 378 SALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKA 437

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G  P++V + T++ G C  G +D AI    KM     +P++ ++  ++     + Q   
Sbjct: 438 RGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAG 497

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           A  I Q M   GV P    +  L +     GL   A  +L
Sbjct: 498 AHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL 537



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 208/438 (47%), Gaps = 20/438 (4%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G++ S+ TY   L AL         +    Q++  G  PD   ++ V+    ++G +++A
Sbjct: 33  GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
            +   +++ESG+     TY+ +I G   A + ++++++   MS  G   P++ T+N L++
Sbjct: 93  KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLK 152

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C+ + ++EA+ +   MA +G +P+V++Y+T+     + G  D+A  +  EM      P
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI-----KG--------F 328
           +       ++G CK  ++ EA    R M   G   + V F+ +I     KG         
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQM 272

Query: 329 VEIMDRDG-VDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG- 383
           +E + R G +DE     +E       P    ++T+++A   +  +     +F  M     
Sbjct: 273 IEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKE 332

Query: 384 --IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
               P+   Y+I+     + ++ ++A+EL+  M   G  P+VV ++ ++ G C  G +DR
Sbjct: 333 FYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDR 392

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A ++ ++M + GV P+  T  +++   S+A +   A   L+ MKA G  P   T+  L +
Sbjct: 393 ACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLD 452

Query: 502 ARRATGLTKEAKRILSKI 519
                G   EA   L+K+
Sbjct: 453 GLCKAGRIDEAITFLAKM 470



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 158/352 (44%), Gaps = 21/352 (5%)

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK    V+L D + R+   + ++ TYN  + A         A+    +M   G  PD  T
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +     + GE D+A+E++ ++  +GV+ N  T  ++I G CK  ++ +AL   +TM 
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135

Query: 311 E-YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G  P++V FN L+KG            +   M +    P+VI+YST+++    AG +
Sbjct: 136 SGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D+   ++++M +    PD  AY+    G  +     +A +    M+  G   + V F+T+
Sbjct: 196 DEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255

Query: 430 IS-----------------GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
           I                    C  G +D A + F++M      P+ + F TL+    +++
Sbjct: 256 IGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSK 315

Query: 473 QPWRAEEILQIMKA---FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           +      + Q MK+   F   P   T+ ++ +         EA+ +++++ N
Sbjct: 316 RLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMAN 367



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 5/131 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++ +L   G+   A AIF  +++ G  P  V Y +LL  L      N +  +  
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLA----RNGLEDLAL 534

Query: 132 QVEENGM-DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           ++ +  +  PD +    V++   ++G  E+A +   +M ++G      TY +++ G    
Sbjct: 535 ELLKTSLCKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKL 594

Query: 191 GKPEESVKLLD 201
           GK +++ +L+D
Sbjct: 595 GKVDKARQLVD 605


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 121/459 (26%), Positives = 220/459 (47%), Gaps = 40/459 (8%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+ +  +++E G K     +T L   L  + +F+ +  + + +   G+      +  V++
Sbjct: 3   AKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVD 62

Query: 151 AFSESGNMEEAMDTFWKMKESGL-TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
               +G   +A++   ++  SG+ TPT   YN +I G   A +  ++ K+L+ M  E ++
Sbjct: 63  GLCGAGMANQALELVREL--SGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEE-SI 119

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            PN+ TY +L+   C       A  V  +M  +G KP+ +TY T+    ++ GE D+A  
Sbjct: 120 VPNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALR 179

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           V++E     +  +  TC  I+ G CK  ++ +AL+F   M++ GV PN V ++ L+ GF 
Sbjct: 180 VMIEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFR 239

Query: 330 EIMDRDGV---------------------------------DEVLALMKEFR---VNPDV 353
           +  + D V                                 D     ++E R   V PDV
Sbjct: 240 QHGELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDV 299

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           +TYS ++N ++ AG  D   E+ +DM + G+KPD   YS L     +E++ + A  LL  
Sbjct: 300 VTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLEL 359

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M  +G  PNVV + +++ G C  G MD    V++ M +   SP++ T+  +M G S+A  
Sbjct: 360 MEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGM 419

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
              A ++ +++K+    P  + + ++  +    G  +EA
Sbjct: 420 LDSAVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEA 458



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 182/383 (47%), Gaps = 1/383 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+N L    K + A+ +F  +   G KP+ +TY TL+  L+     +    +M 
Sbjct: 123 VFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMI 182

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +     +  D I    ++    ++  +++A+    +M++ G+ P   TY+ L+ G+   G
Sbjct: 183 EQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHG 242

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +  ++  +              Y   + A C    +  A   + ++  SG+ PDVVTY
Sbjct: 243 ELDRVIRFFEEEKARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTY 302

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +   +A+ G+ D + E++ +M  NGV+P+  T   +I+  CKE K ++A R    M+ 
Sbjct: 303 SMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEA 362

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PN+V +N ++ G  +    D V  V  +M + R +PDV+TYS IMN  S AG +D 
Sbjct: 363 AGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDS 422

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV-IFTTII 430
             ++F+ +  +   PDA AYS++     R  + E+A  +   M  +    N+      ++
Sbjct: 423 AVKLFELIKSSREGPDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNICRALAGLV 482

Query: 431 SGWCSDGSMDRAIEVFDKMCEHG 453
           +  C     D A  + +   E G
Sbjct: 483 AALCDAERTDSARRIVEVASERG 505


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 125/438 (28%), Positives = 201/438 (45%), Gaps = 23/438 (5%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C   V S + L++ L + G+  EA  ++  ++E    P LV YT+ +  L    R
Sbjct: 170 MAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANR 229

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD-----------------TF 165
                    ++   G   D++ F+ VI    + G+ EEA +                 TF
Sbjct: 230 VAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTF 289

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS--REGNVKPNLRTYNVLVRAW 223
            +M      P+   +NTLI     + +  + V L   M   +E    PNL TYN++V   
Sbjct: 290 EEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNL 349

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C  K + EA  ++++MA  G+ PDVVTY+ +     + G+ D+A +++ EM   GV P+ 
Sbjct: 350 CKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDS 409

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T   I++   K GK+  AL    TMK  G  P+LV +N L+ G  +    D     LA 
Sbjct: 410 FTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAK 469

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M   +  PDV +Y+ I+ A   +G       IF +M K G+ PD   Y  L  G  R   
Sbjct: 470 MVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGL 529

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            + A ELL T   S   P+ V+   ++ G C  G  + A EV ++M + G   +  T+  
Sbjct: 530 EDLALELLKT---SLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYIN 586

Query: 464 LMWGYSEARQPWRAEEIL 481
           ++ G  +  +  +A +++
Sbjct: 587 VVRGLRKLGKVDKARQLV 604



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 205/460 (44%), Gaps = 22/460 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L + G+  +A+ +   L E G K +++TY+ ++       R +    I   +   G
Sbjct: 79  VLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGG 138

Query: 138 -MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
              PD + FN+++        M EA   F  M ++G  P   +Y+TL+ G   AG+ +E+
Sbjct: 139 GCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEA 198

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            +L + M  +  V P+L  Y   V   C    + EA +   KM   G K D V ++T+  
Sbjct: 199 CRLWEEMVEKSCV-PDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIG 257

Query: 257 AYAQNGEADQAEEVIVE-----------------MEHNGVQPNGRTCGIIISGYCKEGKI 299
              + G A++A+  ++E                 M      P+      +I   CK  ++
Sbjct: 258 ILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRL 317

Query: 300 KEA-LRFAR--TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
            +  L F R  +MKE+   PNL  +N+++    +    D   E++  M  + ++PDV+TY
Sbjct: 318 PDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTY 377

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           S +++     G +D+  ++ ++M K G+ PD+   + +     +  + + A   L TM  
Sbjct: 378 SALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKA 437

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G  P++V + T++ G C  G +D AI    KM     +P++ ++  ++     + Q   
Sbjct: 438 RGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAG 497

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           A  I Q M   GV P    +  L +     GL   A  +L
Sbjct: 498 AHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELL 537



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/438 (24%), Positives = 208/438 (47%), Gaps = 20/438 (4%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G++ S+ TY   L AL         +    Q++  G  PD   ++ V+    ++G +++A
Sbjct: 33  GYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKA 92

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
            +   +++ESG+     TY+ +I G   A + ++++++   MS  G   P++ T+N L++
Sbjct: 93  KELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLK 152

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C+ + ++EA+ +   MA +G +P+V++Y+T+     + G  D+A  +  EM      P
Sbjct: 153 GLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVP 212

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI-----KG--------F 328
           +       ++G CK  ++ EA    R M   G   + V F+ +I     KG         
Sbjct: 213 DLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQM 272

Query: 329 VEIMDRDG-VDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG- 383
           +E + R G +DE     +E       P    ++T+++A   +  +     +F  M     
Sbjct: 273 IEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKE 332

Query: 384 --IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
               P+   Y+I+     + ++ ++A+EL+  M   G  P+VV ++ ++ G C  G +DR
Sbjct: 333 FYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDR 392

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A ++ ++M + GV P+  T  +++   S+A +   A   L+ MKA G  P   T+  L +
Sbjct: 393 ACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLD 452

Query: 502 ARRATGLTKEAKRILSKI 519
                G   EA   L+K+
Sbjct: 453 GLCKAGRIDEAITFLAKM 470



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/352 (23%), Positives = 158/352 (44%), Gaps = 21/352 (5%)

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK    V+L D + R+   + ++ TYN  + A         A+    +M   G  PD  T
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +     + GE D+A+E++ ++  +GV+ N  T  ++I G CK  ++ +AL   +TM 
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135

Query: 311 E-YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G  P++V FN L+KG            +   M +    P+VI+YST+++    AG +
Sbjct: 136 AGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D+   ++++M +    PD  AY+    G  +     +A +    M+  G   + V F+T+
Sbjct: 196 DEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255

Query: 430 IS-----------------GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
           I                    C  G +D A + F++M      P+ + F TL+    +++
Sbjct: 256 IGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSK 315

Query: 473 QPWRAEEILQIMKA---FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           +      + Q MK+   F   P   T+ ++ +         EA+ +++++ N
Sbjct: 316 RLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMAN 367



 Score = 55.1 bits (131), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 32/131 (24%), Positives = 64/131 (48%), Gaps = 5/131 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++ +L   G+   A AIF  +++ G  P  V Y +LL  L      N +  +  
Sbjct: 479 VFSYTIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLA----RNGLEDLAL 534

Query: 132 QVEENGM-DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           ++ +  +  PD +    V++   ++G  E+A +   +M ++G      TY  +++G    
Sbjct: 535 ELLKTSLCKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKL 594

Query: 191 GKPEESVKLLD 201
           GK +++ +L+D
Sbjct: 595 GKVDKARQLVD 605


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 124/464 (26%), Positives = 221/464 (47%), Gaps = 10/464 (2%)

Query: 63  CMNK-ESCRT---VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT 118
           C +K + CR     RS   L++     GK    +  F ++I  G KP++ TY  ++  + 
Sbjct: 85  CFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMC 144

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
            +    +   +  +++  G+ PD++ +N++I+ + + G +++ +  F +MK     P   
Sbjct: 145 KEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVI 204

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           TYNTLI  +   GK  + ++    M + G +KPN+ +Y+ LV A+C E  + +A      
Sbjct: 205 TYNTLINCFCKFGKLPKGLEFFREMKQSG-LKPNVVSYSTLVDAFCKEDMMQQALKFYVD 263

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M   G+ P+  TY ++  AY + G    A  +  EM   GV+ N  T   +I G C   +
Sbjct: 264 MRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVER 323

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           IKEA      M   GV PNL  +  LI GFV+  + D   E+L  MK   + PD++ Y T
Sbjct: 324 IKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGT 383

Query: 359 IMNAWSTAGF--MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
            +  WS  G   ++  K + ++M + GIK +   Y+ L   Y + + P +   LL  M+E
Sbjct: 384 FI--WSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLE 441

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYSEARQPW 475
                  V F  +I G C +  + +AI+ F ++  + G+  N   +  ++ G  +  Q  
Sbjct: 442 LDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVE 501

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            A  + + M   G+ P ++ +  L + +   G   +A  +  K+
Sbjct: 502 AATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKM 545



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 192/417 (46%), Gaps = 1/417 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P    +  L + L  +  F       S+++   + P +   N +++ F+  G  +     
Sbjct: 61  PGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRF 120

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F  M  +G  PT  TYN +I      G  E +  L + M   G + P+  TYN ++  + 
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLI-PDTVTYNSMIDGYG 179

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
               + +      +M +   +PDV+TYNT+   + + G+  +  E   EM+ +G++PN  
Sbjct: 180 KVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVV 239

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           +   ++  +CKE  +++AL+F   M+  G+ PN   +  L+  + +I +      +   M
Sbjct: 240 SYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEM 299

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            +  V  +V+TY+ +++       + + +E+F  M  AG+ P+  +Y+ L  G+V+ +  
Sbjct: 300 SQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNM 359

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           ++A ELL  M   G  P+++++ T I   C    ++ A  V ++M E G+  N   + TL
Sbjct: 360 DRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTL 419

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           M  Y ++  P     +L+ M    +     TF +L +      L  +A     +I N
Sbjct: 420 MDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISN 476



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 83/383 (21%), Positives = 166/383 (43%), Gaps = 41/383 (10%)

Query: 76  TKLMNSLIER----GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           T   NS+I+     G+  +    F  +     +P ++TY TL+       +         
Sbjct: 168 TVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFR 227

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++++G+ P+ + ++ +++AF +   M++A+  +  M+  GL P   TY +L+  Y   G
Sbjct: 228 EMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIG 287

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              ++ +L D MS+ G V+ N+ TY  L+   C+ + I EA  +  KM  +G+ P++ +Y
Sbjct: 288 NLSDAFRLADEMSQVG-VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASY 346

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +   + +    D+A E++ EM+  G++P+    G  I   C   KI+ A      M+E
Sbjct: 347 TALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQE 406

Query: 312 YGVHPNLVIFNLLIKG----------------------------FVEIMD--------RD 335
            G+  N  I+  L+                              F  ++D          
Sbjct: 407 KGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSK 466

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
            +D    +  +F +  +   Y+ +++       ++    +F+ M + G+ PD  AY+ L 
Sbjct: 467 AIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLI 526

Query: 396 KGYVREQEPEKAEELLMTMIESG 418
            G +++    +A  L   M E G
Sbjct: 527 DGKLKQGNVVQALALRDKMAEIG 549



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/362 (21%), Positives = 153/362 (42%), Gaps = 38/362 (10%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M   SC   V +   L+N   + GK  +    F  + + G KP++V+Y+TL+ A   +  
Sbjct: 194 MKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDM 253

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                     +   G+ P+   + ++++A+ + GN+ +A     +M + G+     TY  
Sbjct: 254 MQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTA 313

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G     + +E+ +L   M   G V PNL +Y  L+  +   KN+  A  ++ +M   
Sbjct: 314 LIDGLCDVERIKEAEELFGKMVTAG-VIPNLASYTALIHGFVKAKNMDRALELLDEMKGR 372

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN-------------------- 282
           G+KPD++ Y T   +     + + A+ V+ EM+  G++ N                    
Sbjct: 373 GIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEG 432

Query: 283 ---------------GRTCGIIISGYCKEGKIKEALR-FARTMKEYGVHPNLVIFNLLIK 326
                            T  ++I G CK   + +A+  F R   ++G+  N  I+  +I 
Sbjct: 433 LHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMID 492

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           G  +    +    +   M +  + PD   Y+++++     G + +   + D M + G++ 
Sbjct: 493 GLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGVES 552

Query: 387 DA 388
            A
Sbjct: 553 GA 554



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/211 (20%), Positives = 94/211 (44%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T L++  ++      A  + + +   G KP L+ Y T + +L   ++  +   +M+++
Sbjct: 345 SYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEM 404

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +E G+  ++  +  +++A+ +S N  E +    +M E  +  T  T+  LI G       
Sbjct: 405 QEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLV 464

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            +++     +S +  ++ N   Y  ++   C E  +  A  +  +MA  G+ PD   Y +
Sbjct: 465 SKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTS 524

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
           +     + G   QA  +  +M   GV+   R
Sbjct: 525 LIDGKLKQGNVVQALALRDKMAEIGVESGAR 555


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 213/427 (49%), Gaps = 8/427 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK-- 121
           ++KE   T  +   +  +L + G+ + A+ I   ++  G       + +++A L +Q+  
Sbjct: 363 VSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGL-LQRTG 421

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
           R  S+  ++S++ + GM P+     A      +    +EA+  + KM E GL    +T N
Sbjct: 422 RLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSN 481

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            LI G       + + ++L  M  +G    N+ TYN++++  C +  I EA  +   M  
Sbjct: 482 ALIHGLCEGKNMKGATEVLRTMVNKGMELDNI-TYNIMIQGCCKDSKIEEALKLRDDMIR 540

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G KPD   +N+I  AY   G+ ++A  ++ +M+  GVQP+  + G II GYCK   I++
Sbjct: 541 KGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQK 600

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A  +   +   G+ PN VI+N LI G+    +  G   VL  M+   + P  +TY ++M+
Sbjct: 601 ANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMH 660

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
               AG +D+ K +F+   K  I+     Y+I+ +G  +  + ++A      M      P
Sbjct: 661 WMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPP 720

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA----RQPWRA 477
           N + +TT++  +C  G+ + A ++FD+M   G+ P+  ++ TL+ G+S+     +   +A
Sbjct: 721 NKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKA 780

Query: 478 EEILQIM 484
            EI  IM
Sbjct: 781 AEISSIM 787



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 208/490 (42%), Gaps = 72/490 (14%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LM++L + G+  EA  +   + E    PS+VT+  L+  L    RF  + +++ ++E  G
Sbjct: 272 LMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLG 331

Query: 138 MDPDSIFFNAVIN-----------------------------------AFSESGNMEEAM 162
           + P+ +  N +I+                                   A  + G ME A 
Sbjct: 332 ITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAE 391

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGY-GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
               +M  +G+T  +  +N+++ G     G+ E  V+L+  M + G +KPN        +
Sbjct: 392 RILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRG-MKPNDALMTACTK 450

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C  +   EA  +  KM   G+  ++ T N +     +      A EV+  M + G++ 
Sbjct: 451 QLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMEL 510

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T  I+I G CK+ KI+EAL+    M   G  P+  +FN +I  + ++   +    +L
Sbjct: 511 DNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLL 570

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             MK   V PDV++Y TI++ +  A  + K  E  +++   G+KP+A  Y+ L  GY R 
Sbjct: 571 GQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRN 630

Query: 402 QEPEKAEELLMTMIESGFHPN-----------------------------------VVIF 426
                A  +L TM   G  P                                    VV +
Sbjct: 631 GNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGY 690

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           T +I G C  G MD A+  F++M    + PN  T+ TLM+ Y ++     A ++   M +
Sbjct: 691 TIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVS 750

Query: 487 FGVHPQKSTF 496
            G+ P   ++
Sbjct: 751 SGIVPDNVSY 760



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 188/422 (44%), Gaps = 24/422 (5%)

Query: 105 PSLVT-YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAF---SESGNMEE 160
           PSLV   +TL +A  + KR   +H + +          +   + +IN     S  G++  
Sbjct: 117 PSLVADRSTLPSARRLIKRLLHLHPVQTAAAAVADASSTPSSDLLINTCVTSSARGSLRL 176

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A+D F  +     +P+  T N L++     G    + K+ D M     V PN  +Y  ++
Sbjct: 177 AVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMI 236

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPD--VVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           +A C    + + + ++  +  +G++     V YN +  A  ++G  D+A  +   ME + 
Sbjct: 237 KALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESR 296

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI-----KG-FVEIM 332
           V P+  T GI+I+G  +  +  E     R M+  G+ PN VI N LI     KG F E +
Sbjct: 297 VAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAI 356

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
                DE+++  KE +     +TY+ I  A    G M++ + I ++M   G+   +  ++
Sbjct: 357 RL--FDEMVS--KEMK--STAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFN 410

Query: 393 ILAKGYV-REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
            +  G + R    E    L+  M++ G  PN  + T      C       A+ ++ KM E
Sbjct: 411 SVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLE 470

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            G+  N+ T   L+ G  E +    A E+L+ M   G+     T+ ++ +     G  K+
Sbjct: 471 KGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQ-----GCCKD 525

Query: 512 AK 513
           +K
Sbjct: 526 SK 527



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/382 (22%), Positives = 167/382 (43%), Gaps = 11/382 (2%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKES-GLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLM 203
           NA++ A + +GN+      F +M++   +TP   +Y ++IK     GK ++  K+L DL+
Sbjct: 197 NALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILSDLI 256

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
                       YN+L+ A C    + EA  +  +M  S + P +VT+  +     ++  
Sbjct: 257 HAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDR 316

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
             +   ++ EME  G+ PN   C  +I  +C++G   EA+R    M    +    V +NL
Sbjct: 317 FGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNL 376

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA-----WSTAGFMDKCKEIFDD 378
           + +   +  + +  + +L    E  ++  +  +S + N+         G ++    +  +
Sbjct: 377 IARALCKEGEMERAERIL----EEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISE 432

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M K G+KP+    +   K   + +  ++A  + + M+E G   N+     +I G C   +
Sbjct: 433 MVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKN 492

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           M  A EV   M   G+  +  T+  ++ G  +  +   A ++   M   G  P    F  
Sbjct: 493 MKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNS 552

Query: 499 LAEARRATGLTKEAKRILSKIK 520
           +  A    G  +EA  +L ++K
Sbjct: 553 IIHAYCDLGKMEEALHLLGQMK 574



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/290 (21%), Positives = 111/290 (38%), Gaps = 35/290 (12%)

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM-EHNGVQPNGRTCGIII 290
           A +  H +++    P V T N +  A A+ G      +V  EM +   V PNG +   +I
Sbjct: 177 AVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMI 236

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
              CK GK+ +  +    +   G+  +                                 
Sbjct: 237 KALCKVGKVDDGFKILSDLIHAGLQQS--------------------------------- 263

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
              + Y+ +M+A   +G +D+   +   M ++ + P    + IL  G  R     +   L
Sbjct: 264 AGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGAL 323

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           L  M   G  PN VI   +I   C  G    AI +FD+M    +     T+  +     +
Sbjct: 324 LREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCK 383

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTF-LLLAEARRATGLTKEAKRILSKI 519
             +  RAE IL+ M + G+      F  ++A   + TG  +   R++S++
Sbjct: 384 EGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEM 433


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 228/478 (47%), Gaps = 19/478 (3%)

Query: 50  KPTDSQPQTHCSFCMN-------KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGG 102
           K  D+ P T  + C++             V+   K++  L +  +  +  A+   +++ G
Sbjct: 167 KARDATPDTCSTLCLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLG 226

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD--PDSIFFNAVINAFSESGNMEE 160
            +PS+VTY TLL + + + R + I  ++ ++E  G    P+ + +N VI   +  G +EE
Sbjct: 227 IEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEE 286

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A +   +M+ S    ++ TYN LI G    G  ++   L   M  EG + P + TYN ++
Sbjct: 287 AAELVEEMRLSK-KASSFTYNPLITGLLARGFVKKVDDLQLEMENEG-IMPTVVTYNAMI 344

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
                   I  A     +M A G+ PDV+TYN++   Y + G   +A  +  ++   G+ 
Sbjct: 345 HGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLA 404

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI----MDRDG 336
           P   T  I+I GYC+ G ++EA R    M E G  P++  + +L+KG   +    M R+ 
Sbjct: 405 PTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREF 464

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            DE+L+  K  R  PD   Y+T + A  T G + K  ++ + +   GI  D   Y+IL  
Sbjct: 465 FDEMLS--KGLR--PDCFAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILID 520

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  +    + AEEL+M MI +G  P+ + +T +I   C  G +  A + F+ M   G+ P
Sbjct: 521 GLCKTGNLKDAEELMMQMISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPP 580

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
           +  T+  ++  Y      + A    + M   GV P + T+ +L  A    G T+ A R
Sbjct: 581 SAVTYTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYR 638



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 100/364 (27%), Positives = 169/364 (46%), Gaps = 1/364 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           K S  TY  L+  L  +     +  +  ++E  G+ P  + +NA+I+   +SG +E A  
Sbjct: 299 KASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQA 358

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
            F +M+  GL P   TYN+L+ GY  AG  +E++ L   + R G + P + TYN+L+  +
Sbjct: 359 KFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAG-LAPTVLTYNILIDGY 417

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C   ++ EA  +  +M   G  PDV TY  +              E   EM   G++P+ 
Sbjct: 418 CRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDC 477

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
                 I      G I ++ +    +   G+  + V +N+LI G  +  +    +E++  
Sbjct: 478 FAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQ 537

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M    + PD ITY+ +++A    GF+ + ++ F+DM   G+ P A  Y+++   Y R   
Sbjct: 538 MISNGLQPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGN 597

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
              A      M+E G  PN + +  +I   C  G    A   F +M E G+ PN  T+  
Sbjct: 598 LYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTL 657

Query: 464 LMWG 467
           L+ G
Sbjct: 658 LIDG 661



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 188/396 (47%), Gaps = 8/396 (2%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           S   ++  +G+ PD    N V+    ++   ++      +M + G+ P+  TYNTL+  +
Sbjct: 182 SAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSF 241

Query: 188 GIAGKPEESVKLLDLM-SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
              G+ ++   LL  M +R  +  PN  TYNV++     +  + EA  ++ +M  S  K 
Sbjct: 242 SKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK-KA 300

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
              TYN + T     G   + +++ +EME+ G+ P   T   +I G  + G+I+ A    
Sbjct: 301 SSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKF 360

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAW 363
             M+  G+ P+++ +N L+ G+ +  ++    E L L  + R   + P V+TY+ +++ +
Sbjct: 361 VEMRAMGLLPDVITYNSLLNGYCKAGNQK---EALLLFGDLRRAGLAPTVLTYNILIDGY 417

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G +++ + + ++M + G  PD + Y+IL KG           E    M+  G  P+ 
Sbjct: 418 CRLGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDC 477

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
             + T I    + G + ++ ++ + +   G+S +  T+  L+ G  +      AEE++  
Sbjct: 478 FAYNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQ 537

Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           M + G+ P   T+  L  A    G  +EA++  + +
Sbjct: 538 MISNGLQPDCITYTCLIHAHCERGFLREARKFFNDM 573



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 62/113 (54%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+++  ERG  +EA+  FN++I  G  PS VTYT ++ A   +    S +    ++
Sbjct: 549 TYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKM 608

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
            E G++P+ I +N +I+A    G  + A   F++M E GL P   TY  LI G
Sbjct: 609 LEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 109/239 (45%), Gaps = 12/239 (5%)

Query: 293 YCKEGKIKEA---------LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
           Y KE K ++A         L   R M  +GV P++   N +++   +    D +  V A 
Sbjct: 162 YSKECKARDATPDTCSTLCLSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAE 221

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG--IKPDAHAYSILAKGYVRE 401
           M +  + P ++TY+T+++++S  G  DK   +  +M   G    P+   Y+++  G  R+
Sbjct: 222 MLQLGIEPSIVTYNTLLDSFSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARK 281

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
              E+A EL+  M  S    +   +  +I+G  + G + +  ++  +M   G+ P + T+
Sbjct: 282 GYLEEAAELVEEMRLSK-KASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTY 340

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
             ++ G  ++ Q   A+     M+A G+ P   T+  L       G  KEA  +   ++
Sbjct: 341 NAMIHGLLQSGQIEAAQAKFVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLR 399


>gi|326529783|dbj|BAK04838.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 490

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 108/391 (27%), Positives = 197/391 (50%), Gaps = 10/391 (2%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P   TY  L+       R +   +   ++ + G+ PD I +++++  F +    EEA+D 
Sbjct: 97  PDTYTYNILIDCCHRACRPDLGPAFFGRLLKTGITPDVITYSSLLQCFCDMKRTEEALDL 156

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG-NVKPNLRTYNVLVRAW 223
               + SG  P   +Y+ ++K +   G+ + ++ LL +M+ +G    P++ +YN+++  +
Sbjct: 157 LLH-RVSGDLPDAISYSVILKSFCDDGRSQCALDLLRMMAEKGAEHSPSVVSYNLVIHGF 215

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
             E  I++A ++ H M   G  PDVVTYN++  A  +    D+AE V+  M HN VQP+ 
Sbjct: 216 FKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMVHNSVQPDA 275

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLA 342
            T   +I GY   G++KE  R  + M+  GV P+LV         ++ + + G + E   
Sbjct: 276 VTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVT----CSSVMDYLCKHGKIKEAEE 331

Query: 343 LMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +     VN   PD++ YS +++ ++  G + K  ++ + M + G+ PD   ++IL   Y 
Sbjct: 332 MFYSRAVNGRKPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVPDLPCFNILINAYA 391

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +    + A      M++ G  PN   + T+IS +C  G MD A+E F +M + GV  + +
Sbjct: 392 KYGMMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKFSEMIDMGVPLDTE 451

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            +  ++ GY       +AEE +  MK   +H
Sbjct: 452 VYMCMVEGYLNHGDSMKAEEFITKMKNMDIH 482



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/386 (25%), Positives = 188/386 (48%), Gaps = 4/386 (1%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD+  +N +I+    +   +     F ++ ++G+TP   TY++L++ +    + EE++ L
Sbjct: 97  PDTYTYNILIDCCHRACRPDLGPAFFGRLLKTGITPDVITYSSLLQCFCDMKRTEEALDL 156

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK--PDVVTYNTIATA 257
           L  + R     P+  +Y+V+++++C++     A +++  MA  G +  P VV+YN +   
Sbjct: 157 L--LHRVSGDLPDAISYSVILKSFCDDGRSQCALDLLRMMAEKGAEHSPSVVSYNLVIHG 214

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + GE  +A  +   M   G  P+  T   +I+  CK   + +A    R+M    V P+
Sbjct: 215 FFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKAEVVLRSMVHNSVQPD 274

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +N LI G++ +        +L +M+   V P ++T S++M+     G + + +E+F 
Sbjct: 275 AVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDYLCKHGKIKEAEEMFY 334

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
                G KPD   YSI+  GY  E    K  +L   M   G  P++  F  +I+ +   G
Sbjct: 335 SRAVNGRKPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVPDLPCFNILINAYAKYG 394

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            MD A+  F+ M + GV PN  T+ T++  + +  +   A E    M   GV      ++
Sbjct: 395 MMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKFSEMIDMGVPLDTEVYM 454

Query: 498 LLAEARRATGLTKEAKRILSKIKNKE 523
            + E     G + +A+  ++K+KN +
Sbjct: 455 CMVEGYLNHGDSMKAEEFITKMKNMD 480



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/284 (22%), Positives = 146/284 (51%), Gaps = 1/284 (0%)

Query: 67  ESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           E   +V S   +++   + G+  +A  +F+ +I+ G+ P +VTY +++ AL   +  +  
Sbjct: 200 EHSPSVVSYNLVIHGFFKEGEISKACHLFHGMIQQGYVPDVVTYNSVINALCKARAMDKA 259

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
             ++  +  N + PD++ +N++I+ +   G ++E       M+  G+ P+  T ++++  
Sbjct: 260 EVVLRSMVHNSVQPDAVTYNSLIHGYLILGQLKETFRLLKVMRSQGVMPSLVTCSSVMDY 319

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
               GK +E+ ++    +  G  KP++  Y++++  +  E ++ +  ++   MA  G+ P
Sbjct: 320 LCKHGKIKEAEEMFYSRAVNGR-KPDIVLYSIMLHGYAIEGSLVKMIDLCEVMARDGVVP 378

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           D+  +N +  AYA+ G  D A     +M   GV+PN  T   +IS +CK G++ +A+   
Sbjct: 379 DLPCFNILINAYAKYGMMDVAMLFFEDMLKQGVKPNEFTYLTVISAFCKMGRMDDAMEKF 438

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
             M + GV  +  ++  +++G++   D    +E +  MK   ++
Sbjct: 439 SEMIDMGVPLDTEVYMCMVEGYLNHGDSMKAEEFITKMKNMDIH 482


>gi|302794007|ref|XP_002978768.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
 gi|300153577|gb|EFJ20215.1| hypothetical protein SELMODRAFT_109608 [Selaginella moellendorffii]
          Length = 713

 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 116/488 (23%), Positives = 222/488 (45%), Gaps = 36/488 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            +R    L++     G    A+A F  +     KP++  YT+L+ A    +      +  
Sbjct: 130 VLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACT 189

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+  +   F ++I+ ++ +GN E A   F K K   L P    YN++++ Y  A
Sbjct: 190 EEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQA 249

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E    LL  M  EG  + NL  Y  ++  +   ++  +  +  H++ A G+ P   T
Sbjct: 250 GNMETVEALLAQMEEEG-FQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAAT 308

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  I   + + G   +A +++ EM+ +GV PN     +I+ GY + G    A +    M 
Sbjct: 309 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 368

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P++V +N+L+  F +    D    VL  ++  R+ P + TY++I++ +   G + 
Sbjct: 369 SAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDGYVKGGHIQ 428

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN-------- 422
           K  E+FD +  AG++P   +Y+ L  G  + ++ E A  +L  M+ +G  PN        
Sbjct: 429 KALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPNERSYTALT 488

Query: 423 ---------------------------VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
                                      +V +  ++   C  G+M RA+EVF ++ + G+ 
Sbjct: 489 EGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLK 548

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
            N  T+ T++ G++   +  +A ++L+ M+  G H     +    +A   +G T+E    
Sbjct: 549 HNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSGDTEEVTET 608

Query: 516 LSKIKNKE 523
           L+ ++ K+
Sbjct: 609 LAVMREKK 616



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/413 (25%), Positives = 198/413 (47%), Gaps = 1/413 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ +  + G  +  +A+   + E G + +L  YTT+L      +      S   +++  G
Sbjct: 242 IVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACG 301

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P +  +  ++  F+++GNM +A+D   +M + G++P    Y  ++ GY   G    + 
Sbjct: 302 LSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAF 361

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+ + M   G +KP++ TYN+LV A+C    + +A  V+  + A+ + P + TY +I   
Sbjct: 362 KVWEDMVSAG-LKPDIVTYNILVHAFCKAGRMDKALGVLENIQANRLLPTIETYTSILDG 420

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G   +A EV   ++  G++P   +   ++SG  K  +++ A      M   GV PN
Sbjct: 421 YVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLDEMLANGVVPN 480

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +  L +G+    D +    +   MK+  +  D++ Y  ++ A   +G M +  E+F 
Sbjct: 481 ERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAVEVFQ 540

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +  AG+K +   Y  +  G+ R+ E  KA +LL  M + GFH + + +T+ I      G
Sbjct: 541 QITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFRSG 600

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
             +   E    M E  +  N +T+ TL+ G+  A  P +A    +  KA G+ 
Sbjct: 601 DTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQ 653



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 171/355 (48%), Gaps = 9/355 (2%)

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           ++GN  + ++ F  + +    P    Y  L+  Y   G    +    + M R  ++KPN+
Sbjct: 112 DAGNWHKIVNAFQVIDK----PVLREYGLLVDFYARHGDKVAARATFEAM-RASHIKPNV 166

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
             Y  L+ A+   +++  A     +M + G++ +   + +I + YA  G  + AE    +
Sbjct: 167 HIYTSLIHAYAEARDMEGAVACTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEK 226

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
            +   + P G     I+  YC+ G ++        M+E G   NL ++  ++ GF EI D
Sbjct: 227 FKAENLVPGGIVYNSIVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRD 286

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            +        +K   ++P   TY  I+  ++ AG M K  +I ++M K G+ P+   Y++
Sbjct: 287 EEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAM 346

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           +  GY R  +   A ++   M+ +G  P++V +  ++  +C  G MD+A+ V + +  + 
Sbjct: 347 IMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANR 406

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF--LL--LAEARR 504
           + P ++T+ +++ GY +     +A E+   +K  G+ P   ++  LL  LA+AR+
Sbjct: 407 LLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQ 461



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 164/322 (50%), Gaps = 1/322 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M+     G    A  ++ +++  G KP +VTY  L+ A     R +    ++  ++ N 
Sbjct: 347 IMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDKALGVLENIQANR 406

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P    + ++++ + + G++++A++ F ++K +GL P   +YN+L+ G   A + E + 
Sbjct: 407 LLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENAR 466

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +LD M   G V PN R+Y  L   +    ++ +A+ +  +M    +  D+V Y  +  A
Sbjct: 467 LMLDEMLANG-VVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKA 525

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             ++G   +A EV  ++   G++ N  T   ++ G+ ++G++ +A    + M+++G H +
Sbjct: 526 CCKSGAMQRAVEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLD 585

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +   IK      D + V E LA+M+E ++  +  TY+T+++ W  A   D+    ++
Sbjct: 586 TICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYE 645

Query: 378 DMGKAGIKPDAHAYSILAKGYV 399
               +G++ D+   + L  G +
Sbjct: 646 QAKASGLQLDSALSNCLLSGLI 667



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/427 (20%), Positives = 177/427 (41%), Gaps = 71/427 (16%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T ++N   E    ++  + F+ L   G  P+  TY  ++   T          I+ ++++
Sbjct: 275 TTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAATYGCIVKLFTKAGNMAKALDILEEMDK 334

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +G+ P+ + +  +++ ++  G+   A   +  M  +GL P   TYN L+  +  AG+ ++
Sbjct: 335 HGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVTYNILVHAFCKAGRMDK 394

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++ +L+ + +   + P + TY  ++  +    +I +A  V  ++  +G++P VV+YN++ 
Sbjct: 395 ALGVLENI-QANRLLPTIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLL 453

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTC----------------------------- 286
           +  A+  + + A  ++ EM  NGV PN R+                              
Sbjct: 454 SGLAKARQMENARLMLDEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLA 513

Query: 287 ------GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
                 G ++   CK G ++ A+   + + + G+  N                       
Sbjct: 514 IDIVAYGALLKACCKSGAMQRAVEVFQQITDAGLKHNR---------------------- 551

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
                        ITY T+++ W+  G + K +++  DM K G   D   Y+   K   R
Sbjct: 552 -------------ITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTICYTSFIKACFR 598

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
             + E+  E L  M E     N   +TT+I GW +    D+AI  +++    G+  +   
Sbjct: 599 SGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQLDSAL 658

Query: 461 FETLMWG 467
              L+ G
Sbjct: 659 SNCLLSG 665



 Score =  105 bits (262), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 55/259 (21%), Positives = 127/259 (49%), Gaps = 1/259 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ + T +++  ++ G  Q+A  +F+ +   G +P +V+Y +LL+ L   ++  +   ++
Sbjct: 410 TIETYTSILDGYVKGGHIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLML 469

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  NG+ P+   + A+   ++ +G++E+A   F +MK+  L      Y  L+K    +
Sbjct: 470 DEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKS 529

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  + +V++   ++  G +K N  TY  ++  W  +  +++A +++  M   G   D + 
Sbjct: 530 GAMQRAVEVFQQITDAG-LKHNRITYCTMLDGWARKGELSKARDLLKDMQKHGFHLDTIC 588

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y +   A  ++G+ ++  E +  M    ++ N RT   +I G+       +A+      K
Sbjct: 589 YTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAK 648

Query: 311 EYGVHPNLVIFNLLIKGFV 329
             G+  +  + N L+ G +
Sbjct: 649 ASGLQLDSALSNCLLSGLI 667



 Score = 47.8 bits (112), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 59/136 (43%)

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           KP    Y +L   Y R  +   A      M  S   PNV I+T++I  +     M+ A+ 
Sbjct: 128 KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 187

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
             ++M   G+  N   F +++ GY+ A     AE   +  KA  + P    +  + +A  
Sbjct: 188 CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 247

Query: 505 ATGLTKEAKRILSKIK 520
             G  +  + +L++++
Sbjct: 248 QAGNMETVEALLAQME 263


>gi|449487636|ref|XP_004157725.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g19290-like [Cucumis
           sativus]
          Length = 885

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 208/434 (47%), Gaps = 2/434 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  C   V S   ++N+   +G+   A  + N +IE G KPS+ T+ T++ A   +  
Sbjct: 283 MGKFRCEPDVYSYNIVINANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGN 342

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                    ++E+ G+  ++I +N +I+ + ++ ++ +A   F +M+   + P   T+NT
Sbjct: 343 VELARKYFDEIEDMGLSQNTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNT 402

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ G+   GK E+  +LL  +S  G +  +    +V V   C      EA  ++  +   
Sbjct: 403 LVAGHYRYGKEEDGNRLLRDLSVSGLLHDS-SLCDVTVAGLCWAGRYDEAMKLLENLLEK 461

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P VV +N+I  AY   G  ++A      M   G+ P+  TC  ++    ++G + EA
Sbjct: 462 GIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEA 521

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M + G     + F +L+ G+  I   +  + +   MK   V PD + ++  +N 
Sbjct: 522 WIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFING 581

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              +G M    ++F DM + G  P+   Y+ L  G+ +  +  +A +L+  M + G  P+
Sbjct: 582 LCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPD 641

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           +     II G C  G M  AIE F  MC  G+SP++ T+ TL+ GY +A     A++++ 
Sbjct: 642 IFTVNMIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMM 701

Query: 483 IMKAFGVHPQKSTF 496
            M   G  P  +T+
Sbjct: 702 KMSDSGWEPDLTTY 715



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 180/380 (47%), Gaps = 7/380 (1%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            +A  +F  +      P  +T+ TL+A      +    + ++  +  +G+  DS   +  
Sbjct: 379 SQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGLLHDSSLCDVT 438

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           +     +G  +EAM     + E G+ P+   +N++I  YG AG  E +     +M + G 
Sbjct: 439 VAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFYAYGIMVKFG- 497

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           + P+  T + L+ +   + ++ EAW  ++ M   G     + +  +   Y + G  + AE
Sbjct: 498 LTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYFRIGAVNMAE 557

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            +  EM+  GV P+       I+G C  G + +A      M   G  PN  ++N LI GF
Sbjct: 558 SLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNFVYNSLIGGF 617

Query: 329 VEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            ++     ++E L L++E     + PD+ T + I+      G M    E F DM + G+ 
Sbjct: 618 CKV---GKLNEALKLVREMNKRGLLPDIFTVNMIICGLCKQGRMKLAIETFMDMCRMGLS 674

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   Y+ L  GY +  +   A++L+M M +SG+ P++  +   I G+C+   ++RA+ +
Sbjct: 675 PDIVTYNTLIDGYCKAFDVGGADDLMMKMSDSGWEPDLTTYNIRIHGYCTVRKINRAVMI 734

Query: 446 FDKMCEHGVSPNLKTFETLM 465
            +++   G+ PN  T+ T++
Sbjct: 735 LEELISVGIVPNTVTYNTMI 754



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 199/423 (47%), Gaps = 8/423 (1%)

Query: 86  GKPQEAQAIFNNLIEGG--HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
           GK ++   +  +L   G  H  SL   T  +A L    R++    ++  + E G+ P  +
Sbjct: 411 GKEEDGNRLLRDLSVSGLLHDSSLCDVT--VAGLCWAGRYDEAMKLLENLLEKGIPPSVV 468

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES-VKLLDL 202
            FN++I A+  +G  E A   +  M + GLTP++ST ++L+      G  +E+ + L D+
Sbjct: 469 AFNSIIAAYGNAGLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDM 528

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           + + G    N+  + VL+  +     +  A ++ ++M   G+ PD V +         +G
Sbjct: 529 IDK-GFPVTNM-AFTVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISG 586

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
               A +V  +M   G  PN      +I G+CK GK+ EAL+  R M + G+ P++   N
Sbjct: 587 LMTDAYDVFSDMLRKGFVPNNFVYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFTVN 646

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           ++I G  +        E    M    ++PD++TY+T+++ +  A  +    ++   M  +
Sbjct: 647 MIICGLCKQGRMKLAIETFMDMCRMGLSPDIVTYNTLIDGYCKAFDVGGADDLMMKMSDS 706

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G +PD   Y+I   GY   ++  +A  +L  +I  G  PN V + T+I+  C +  +D A
Sbjct: 707 GWEPDLTTYNIRIHGYCTVRKINRAVMILEELISVGIVPNTVTYNTMINAVC-NVILDHA 765

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           + +  K+ +    PN  T   L+  + +   P +A    Q +    +   ++T  L+  A
Sbjct: 766 MILTAKLLKMAFVPNTVTVNVLLSQFCKQGMPEKAIFWGQKLSEIHLDFDETTHKLMNRA 825

Query: 503 RRA 505
            RA
Sbjct: 826 YRA 828



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 186/421 (44%), Gaps = 40/421 (9%)

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           + D    + ++ AF +S    EA++   KM+E G+TP  S  + L +    AG      K
Sbjct: 184 ESDFSVLDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWK 243

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNE--KNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           L   + R+G   PN  T+N+L+  +C +    I EA  ++H M     +PDV +YN +  
Sbjct: 244 LFGDVVRKGPC-PNNFTFNLLILEFCRKGWTRIGEA--LLHVMGKFRCEPDVYSYNIVIN 300

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A    G++  A  ++  M  NG +P+  T   II  +CKEG ++ A ++   +++ G+  
Sbjct: 301 ANCLKGQSSYALHLLNLMIENGCKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQ 360

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N +++N++I G+V+  D    + +   M+   + PD IT++T++      G  +    + 
Sbjct: 361 NTIVYNIMISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLL 420

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            D+  +G+  D+    +   G       ++A +LL  ++E G  P+VV F +II+ + + 
Sbjct: 421 RDLSVSGLLHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNA 480

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKT-----------------------------------F 461
           G  +RA   +  M + G++P+  T                                   F
Sbjct: 481 GLEERAFYAYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAF 540

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             L+ GY        AE +   MK  GV P    F         +GL  +A  + S +  
Sbjct: 541 TVLLDGYFRIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLR 600

Query: 522 K 522
           K
Sbjct: 601 K 601



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/456 (22%), Positives = 188/456 (41%), Gaps = 36/456 (7%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           +  LM + ++     EA  I + + E G  P+    + L   L       ++  +   V 
Sbjct: 190 LDTLMQAFVKSEMHFEALEILSKMREVGVTPNPSAISILFRLLIRAGDCGAVWKLFGDVV 249

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G  P++  FN +I  F   G           M +    P   +YN +I    + G+  
Sbjct: 250 RKGPCPNNFTFNLLILEFCRKGWTRIGEALLHVMGKFRCEPDVYSYNIVINANCLKGQSS 309

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI------------------TEAWNVM 236
            ++ LL+LM   G  KP++ T+  ++ A+C E N+                  T  +N+M
Sbjct: 310 YALHLLNLMIENG-CKPSIATFCTIIDAFCKEGNVELARKYFDEIEDMGLSQNTIVYNIM 368

Query: 237 -----------------HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
                             +M    + PD +T+NT+   + + G+ +    ++ ++  +G+
Sbjct: 369 ISGYVKARDISQANLLFEEMRTKDIVPDGITFNTLVAGHYRYGKEEDGNRLLRDLSVSGL 428

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
             +   C + ++G C  G+  EA++    + E G+ P++V FN +I  +      +    
Sbjct: 429 LHDSSLCDVTVAGLCWAGRYDEAMKLLENLLEKGIPPSVVAFNSIIAAYGNAGLEERAFY 488

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
              +M +F + P   T S+++ +    G +D+      DM   G      A+++L  GY 
Sbjct: 489 AYGIMVKFGLTPSSSTCSSLLISLVRKGSLDEAWIALYDMIDKGFPVTNMAFTVLLDGYF 548

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           R      AE L   M   G  P+ V F   I+G C  G M  A +VF  M   G  PN  
Sbjct: 549 RIGAVNMAESLWNEMKGRGVFPDAVAFAAFINGLCISGLMTDAYDVFSDMLRKGFVPNNF 608

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            + +L+ G+ +  +   A ++++ M   G+ P   T
Sbjct: 609 VYNSLIGGFCKVGKLNEALKLVREMNKRGLLPDIFT 644


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 106/403 (26%), Positives = 200/403 (49%), Gaps = 9/403 (2%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE--ENGM-DPDSI 143
           K  EA  ++  ++    +   V+ + L+  L  ++R    + +  ++E  E+G   PD +
Sbjct: 131 KVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVV 190

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            + A+I+ F +SGN+E+AM     M+     P   TY++L+ G   AG  ++++ L   M
Sbjct: 191 TYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRM 250

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
           + +G V PN+ TY  L+   C    +  A  +M +M A+    D V+YN +   Y + G 
Sbjct: 251 TSKGCV-PNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGR 309

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK-EYGVHPNLVIFN 322
            ++A+++  EM      P+  T   ++ G+C   +++EA      MK   G+ P++V ++
Sbjct: 310 IEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYS 369

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +++ G+          E +  M    V P+ +TYS++++    AG ++   E+  ++ K 
Sbjct: 370 IVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK- 428

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
              PD   Y+I+ +G       E+A  LL  M+     P+V  F ++I   C  G MD A
Sbjct: 429 ---PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEA 485

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
            ++   M  HG+ P + T+ TL+ G+S   +   A E+ ++M+
Sbjct: 486 WKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMR 528



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/421 (24%), Positives = 206/421 (48%), Gaps = 7/421 (1%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN-GMDPDSIFFNAVINAFSESGNMEEAMD 163
           P+  TY  ++  L   +  +  + ++ ++ +   + PD + ++ VIN F + G M+ A +
Sbjct: 7   PNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACE 66

Query: 164 TFWKM-KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
              +M    G+ P   TY +++ G    GK + + +++  M  +G V+P+  T++ L+  
Sbjct: 67  ILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKG-VEPDKFTFSALITG 125

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME--HNGV- 279
           WCN + + EA  +  ++  S  + D V+ + + T   +     +A E+  EME   +G  
Sbjct: 126 WCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAW 185

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           +P+  T   +I G+CK G +++A++    M+     PN+V ++ L+ G  +  D D   +
Sbjct: 186 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 245

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +   M      P+V+TY+T+++    A  +D  + + D+M       D  +Y+ L  GY 
Sbjct: 246 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYC 305

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM-CEHGVSPNL 458
           R    E+A++L   M      P+ + +T ++ G+C+   ++ A  + + M    G+ P++
Sbjct: 306 RLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 365

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+  ++ GYS A++   A E +Q M A  V P   T+  L +     G    A  +L  
Sbjct: 366 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKN 425

Query: 519 I 519
           +
Sbjct: 426 V 426



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 198/432 (45%), Gaps = 58/432 (13%)

Query: 68  SCRT-VRSMTKLMNSLIERGKPQEAQAIFNNLI---EGGHKPSLVTYTTLLAALTIQKRF 123
           SCR    S + L+  L    +  EA  +F  +    +G  KP +VTYT L+         
Sbjct: 146 SCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNL 205

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPT------- 176
                ++  +E     P+ + ++++++   ++G++++A+D F +M   G  P        
Sbjct: 206 EKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTL 265

Query: 177 ----------------------------TSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
                                       T +YN L+ GY   G+ EE+ +L   M+ +  
Sbjct: 266 IHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSC 325

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKM-AASGMKPDVVTYNTIATAYAQNGEADQA 267
           + P+  TY  LVR +CN   + EA  ++  M  A+G+ PDVVTY+ +   Y++     +A
Sbjct: 326 L-PDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEA 384

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
            E I EM    V PN  T   +I G CK G++  A+   + + +    P++V + ++I+G
Sbjct: 385 AEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNVDK----PDVVTYTIVIEG 440

Query: 328 FVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
                  D  +E L L++E    RV P V T+++++ A    G MD+  ++   M   G+
Sbjct: 441 LC---GTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGL 497

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMI----ESGFHPNVV---IFTTIISGWCSDG 437
           +P    Y+ L +G+ R    E A EL   M     +S    N+V    F+ +I G C   
Sbjct: 498 EPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAR 557

Query: 438 SMDRAIEVFDKM 449
            +D+A+ V +++
Sbjct: 558 EIDKAMAVVEEL 569



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 185/390 (47%), Gaps = 11/390 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L + G   +A  +F  +   G  P++VTYTTL+  L    + ++   +M 
Sbjct: 224 VVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMD 283

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++       D++ +NA+++ +   G +EEA   F +M      P   TY  L++G+  A 
Sbjct: 284 EMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNAS 343

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE+  LL+ M     + P++ TY+++V  +   K   EA   + +M A  + P+ VTY
Sbjct: 344 RLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTY 403

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +++     + G  + A EV+     N  +P+  T  I+I G C   + +EAL     M  
Sbjct: 404 SSLIDGLCKAGRVNHAMEVL----KNVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVN 459

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             V P++  FN +I     + D D   ++L  M    + P ++TY+T++  +S  G M+ 
Sbjct: 460 KRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEI 519

Query: 372 CKEIFDDMGKAGIKPDA-------HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             E+F+ M +   K  +        A+S L +G  + +E +KA  ++  +      P   
Sbjct: 520 AYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEE 579

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
               I+ G    G  + A ++ + + + G+
Sbjct: 580 DCLAIVDGLLRAGRTEEAGKLINSISKVGL 609



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 162/322 (50%), Gaps = 11/322 (3%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA-ASGMKPDVVTYNTIATAYAQNGEADQA 267
           V PN RTYNV+V   C  +  ++A+ V+ +M     + PD+VTY+T+   + + GE D+A
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 268 EEVIVEM-EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
            E++ EM   +G+ P+  T   ++ G C++GK+  A    R MK  GV P+   F+ LI 
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNP---DVITYSTIMNAWSTAGFMDKCKEIFDDMG--- 380
           G+    +   VDE L L KE   +    D ++ S ++        + +  E+F +M    
Sbjct: 125 GWC---NARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMRE 181

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
               KPD   Y+ L  G+ +    EKA ++L  M      PNVV +++++ G C  G +D
Sbjct: 182 DGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 241

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
           +A+++F +M   G  PN+ T+ TL+ G   A +   A  ++  M A        ++  L 
Sbjct: 242 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALL 301

Query: 501 EARRATGLTKEAKRILSKIKNK 522
           +     G  +EAK++  ++  K
Sbjct: 302 DGYCRLGRIEEAKQLFKEMAAK 323



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/356 (25%), Positives = 170/356 (47%), Gaps = 10/356 (2%)

Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA 232
           + P   TYN ++ G   A    ++ ++L  M    +V P+L TY+ ++  +C +  +  A
Sbjct: 5   VAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRA 64

Query: 233 WNVMHKMAA-SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
             ++ +M    GM PDVVTY ++     ++G+ D+A E++ EM+  GV+P+  T   +I+
Sbjct: 65  CEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALIT 124

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN- 350
           G+C   K+ EAL+  + +       + V  + LI G         + E   L +E  +  
Sbjct: 125 GWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCR---ERRIGEAYELFQEMEMRE 181

Query: 351 -----PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
                PDV+TY+ +++ +  +G ++K  ++   M      P+   YS L  G  +  + +
Sbjct: 182 DGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLD 241

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +A +L   M   G  PNVV +TT+I G C+   +D A  + D+M       +  ++  L+
Sbjct: 242 QALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALL 301

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            GY    +   A+++ + M A    P + T+  L          +EA+ +L  +K 
Sbjct: 302 DGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKT 357



 Score = 44.7 bits (104), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 33/151 (21%), Positives = 65/151 (43%), Gaps = 7/151 (4%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +NK    +V +   ++ +L   G   EA  +   +   G +P +VTYTTLL   +   R 
Sbjct: 458 VNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRM 517

Query: 124 NSIHSIMSQVEENGMDPDSI-------FFNAVINAFSESGNMEEAMDTFWKMKESGLTPT 176
              + +   +        S         F+A+I    ++  +++AM    +++     P 
Sbjct: 518 EIAYELFEVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPA 577

Query: 177 TSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
                 ++ G   AG+ EE+ KL++ +S+ G
Sbjct: 578 EEDCLAIVDGLLRAGRTEEAGKLINSISKVG 608


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 129/524 (24%), Positives = 237/524 (45%), Gaps = 76/524 (14%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL---TIQKRFNSIHS 128
           + S   L+N   E  + +  +++F  L + G  P++ TYT ++      +  K  + + +
Sbjct: 213 ILSCNFLLNCFAEANQTEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKA 272

Query: 129 --IMSQVEENGMDP-----------------------------------DSIFFNAVINA 151
             ++ ++E NG  P                                   +S  +NAVI+ 
Sbjct: 273 TEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHE 332

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP 211
           F  +G + EA +    M+  G++PT  +Y+ LI G    G+ E+++ L++ M  + NVKP
Sbjct: 333 FCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMV-QSNVKP 391

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           +L TY+ L    C       + ++ H + A G K DV++YNT+   +    +   A +++
Sbjct: 392 SLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLV 451

Query: 272 VEMEHNGVQPNGRTCGIIISGYCK-----------------------------------E 296
            EM  NG  PN  T   +I G+CK                                   E
Sbjct: 452 HEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNRE 511

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
           G   EAL+    +++ G+ PN   +N++IK   +    +   EVL +M +  V P  I Y
Sbjct: 512 GHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHY 571

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           +T+++ ++      K   ++  M K GI P    Y++L   +    + ++A  L   MI+
Sbjct: 572 NTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIK 631

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G  P+ +IFT II+G+C  G M  A  ++++M + G SPN+ T+  L+ GY + ++  +
Sbjct: 632 KGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDK 691

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           A+ +   MK   V P   T+  L    ++ G +   + + +++K
Sbjct: 692 ADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMK 735



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 106/423 (25%), Positives = 205/423 (48%), Gaps = 1/423 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++     G+  EA  +  ++   G  P+  +Y+ L+  L  + +      ++ ++ ++ 
Sbjct: 329 VIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSN 388

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P  + ++++ +   +SG  E ++  F  +   G      +YNTLI G+ +      + 
Sbjct: 389 VKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSAC 448

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL+  M   G+V PN  T+N L+  +C  + + +A  V   M   G++ ++ T N +A  
Sbjct: 449 KLVHEMRMNGSV-PNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADE 507

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G   +A ++I E++  G+ PN  T  I+I   CKE K ++A      M +  V P 
Sbjct: 508 FNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPC 567

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +N LI G+ +  +      + A M +  + P ++TY+ ++N +S    M +   +F 
Sbjct: 568 AIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFK 627

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K G+ PD   ++ +  G+ +  + + A  L   M + G  PNVV +T +I G+    
Sbjct: 628 EMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIK 687

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            MD+A  +F+KM    V+P+  T+  L++GY       R  E+   MK  GV P  + + 
Sbjct: 688 RMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTAYA 747

Query: 498 LLA 500
            L 
Sbjct: 748 TLG 750



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 91/377 (24%), Positives = 177/377 (46%), Gaps = 12/377 (3%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           +++   ++  M    I  N +I  F+E+  + +A D F + +  GL     + N L+  +
Sbjct: 164 TLLDSPQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCF 223

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK-----NITEAWNVMHKMAAS 242
             A + E    L + +   G   PN+ TY +++  +C        +I +A  V+ +M  +
Sbjct: 224 AEANQTEFIRSLFEELKDSGP-SPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMN 282

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  P VVTY        + G  + A  +I ++       N      +I  +C+ G++ EA
Sbjct: 283 GESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEA 342

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTI 359
                 M+ +G+ P    +++LI G  +   +  V++ L L++E     V P ++TYS++
Sbjct: 343 FELLEDMRSHGISPTAYSYSILIDGLCK---KGQVEKALDLIEEMVQSNVKPSLVTYSSL 399

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
            +    +G  +    +F ++G  G K D  +Y+ L  G+V +++   A +L+  M  +G 
Sbjct: 400 FDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGS 459

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            PN   F  +I G+C    +D+A+EVF  M + GV  N+ T   +   ++     W A +
Sbjct: 460 VPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALK 519

Query: 480 ILQIMKAFGVHPQKSTF 496
           ++  ++  G+ P   T+
Sbjct: 520 LINEVQDLGIVPNSYTY 536



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 82/186 (44%), Gaps = 15/186 (8%)

Query: 34  AKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQA 93
           AK++NP +   LY+        P              ++ + T L+N    R K QEA  
Sbjct: 579 AKQSNPTKALLLYAKMLKVGIPP--------------SIVTYTMLINMFSNRSKMQEAYY 624

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +F  +I+ G  P  + +T ++A         S  ++  ++ + G  P+ + +  +I+ + 
Sbjct: 625 LFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYF 684

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           +   M++A   F KMK   +TP   TY  LI GY   G  +   ++ + M +E  V PN 
Sbjct: 685 KIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYSDRVREMFNEM-KENGVFPNY 743

Query: 214 RTYNVL 219
             Y  L
Sbjct: 744 TAYATL 749


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 194/422 (45%), Gaps = 9/422 (2%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD--PDSIFFNAVINAFSESGNMEEA 161
           +P +VTY  L+  L    R      ++  +    +D  PD +  N V++   +SG ++EA
Sbjct: 169 RPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA 228

Query: 162 MDTFWKMKES---GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
           +  F + + S   G  P T TYN LI  +   G    + +L++ M  EG V  N+ T N 
Sbjct: 229 L-AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEG-VPQNIVTLNT 286

Query: 219 LVRAWCNEKNITEAWNVMH--KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           +V   C       A       +      K + VTY+T+  A         A E+  E   
Sbjct: 287 IVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMS 346

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G  P+      +ISG  + G++++A   A +MKE G   +   +N+LI GF        
Sbjct: 347 EGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHE 406

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             E+L  MKE  + PDV TY+T+++    AG      E+   M   G +P    +  L  
Sbjct: 407 AYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVH 466

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           GY +  + ++A  +L +M ESG HPN VI+ T+I   C  G +D AIE+FD+M E  V  
Sbjct: 467 GYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPA 526

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N+ TF  L+ G  +   P +A E++  M+     P   T  +L E     G T   KR +
Sbjct: 527 NVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFM 586

Query: 517 SK 518
            +
Sbjct: 587 QQ 588



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 188/390 (48%), Gaps = 10/390 (2%)

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           D   FN+++ A +   ++      +  M+  + + P   TY  L+ G   AG+  +++++
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 200 LDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS--GMKPDVVTYNTIAT 256
           LD MSR+  +++P++ T N +V   C    + EA   + +  +S  G  P+ VTYN +  
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A+ + G    A E++ +ME+ GV  N  T   I+ G C+ G+   AL F R  +   V P
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRT--VWP 312

Query: 317 ----NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
               N V ++ L+   +   +     E+         +PD I Y T+++  + AG ++  
Sbjct: 313 EGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             +   M +AG K D  AY+IL  G+ R++   +A ELL  M E G  P+V  + T++SG
Sbjct: 373 CSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G      E+  KM + G  P++ TF TL+ GY +  +   A  IL+ M   G+HP 
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              +  L +     G    A  +  ++K K
Sbjct: 493 NVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 1/251 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L+ +L+       A  +F+  +  GH P  + Y T+++ LT   R     S+ S ++E
Sbjct: 322 STLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE 381

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G   D+  +N +I  F     + EA +   +MKE G+ P   TYNTL+ G   AG    
Sbjct: 382 AGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAA 441

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
             +LL  M  +G  +P++ T+  LV  +C    I EA  ++  M  SG+ P+ V YNT+ 
Sbjct: 442 VDELLGKMIDDG-CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLI 500

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G+ D A E+  EM+   V  N  T   ++ G   +   ++A      M+E    
Sbjct: 501 DFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCF 560

Query: 316 PNLVIFNLLIK 326
           P+ V  ++L++
Sbjct: 561 PDYVTVDVLME 571



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 110/228 (48%), Gaps = 1/228 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L + G+ ++A ++ +++ E G K     Y  L+A    +KR +  + ++ +++E G
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N +++   ++G+     +   KM + G  P+  T+ TL+ GY   GK +E++
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L  M   G + PN   YN L+   C   ++  A  +  +M    +  +V T+N +   
Sbjct: 479 RILRSMDESG-IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKG 537

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
                  ++A E++ +M      P+  T  +++      G+     RF
Sbjct: 538 LRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRF 585



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 24/264 (9%)

Query: 37  NNPGEKKQLYSNSKPTDSQPQTHCSFCMN---------KESCRTVRSM--------TKLM 79
           NN G   +L+         P     F M          +++C    SM        TK  
Sbjct: 332 NNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAY 391

Query: 80  NSLI----ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           N LI     + +  EA  +   + E G +P + TY TLL+       F ++  ++ ++ +
Sbjct: 392 NILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMID 451

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +G  P  I F  +++ + + G ++EA+     M ESG+ P    YNTLI      G  + 
Sbjct: 452 DGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDL 511

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE-AWNVMHKMAASGMKPDVVTYNTI 254
           +++L D M +E +V  N+ T+N L++    +KN+ E A+ +M +M      PD VT + +
Sbjct: 512 AIELFDEM-KEKSVPANVTTFNALLKGL-RDKNMPEKAFELMDQMREERCFPDYVTVDVL 569

Query: 255 ATAYAQNGEADQAEEVIVEMEHNG 278
                  GE D+ +  + + EH  
Sbjct: 570 MEWLPVIGETDRLKRFMQQGEHTA 593


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  185 bits (469), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 210/465 (45%), Gaps = 20/465 (4%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL+ S+ +        ++ + +   G  P++ T   L+ +     R     S+++++ + 
Sbjct: 66  KLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKL 125

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  PD+  F  +I      G + EA+  F KM   G  P   TY TLI G    G    +
Sbjct: 126 GHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAA 185

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++LL  M ++ N +PN+  YN ++ + C ++ +TEA+N+  +M   G+ PD+ TYN++  
Sbjct: 186 IRLLGSMVQK-NCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIH 244

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A     E      ++ EM  + + P+  +   ++   CKEGK+ EA      M + GV P
Sbjct: 245 ALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEP 304

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF-------- 368
           N+V +  L+ G   + + D   +V   M      P+VI+Y+T++N +             
Sbjct: 305 NVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYT 364

Query: 369 -----------MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
                      MD+  ++FD M   G  P+  +Y+ L  GY + Q  +KA  L   M   
Sbjct: 365 XLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQ 424

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
              P+ V ++T+I G C    +  AI +F +M      PNL T+  L+    + R    A
Sbjct: 425 ELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEA 484

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             +L+ ++   + P      +  +     G  + A+ + S + +K
Sbjct: 485 MALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSK 529



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 218/480 (45%), Gaps = 21/480 (4%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           FN ++     PS V +  LL ++   K  +++ S+  Q++  G+ P+    + +IN+F  
Sbjct: 49  FNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCH 108

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
              +  A     K+ + G  P T+T+ TLI+G  + GK  E++ L D M  EG  +P++ 
Sbjct: 109 LNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEG-FRPDVV 167

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TY  L+   C   N + A  ++  M     +P+V  YNTI  +  ++ +  +A  +  EM
Sbjct: 168 TYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEM 227

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G+ P+  T   +I   C   + K        M +  + P++V FN ++    +    
Sbjct: 228 VTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKV 287

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
               +V+  M +  V P+V+TY+ +M+       MD+  ++FD M   G  P+  +Y+ L
Sbjct: 288 TEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTL 347

Query: 395 AKGYVREQEPEK-------------------AEELLMTMIESGFHPNVVIFTTIISGWCS 435
             GY + Q  +K                   A ++  TM+  G  PNV+ + T+I+G+C 
Sbjct: 348 INGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCK 407

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              +D+A+ +F +MC   + P+  T+ TL+ G     +   A  +   M A    P   T
Sbjct: 408 IQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVT 467

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNL 555
           + +L +         EA  +L  I+      +++   +I ++ + R    EA    + NL
Sbjct: 468 YRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQV-NNIAIDGMCRAGELEAARDLFSNL 526



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 127/498 (25%), Positives = 224/498 (44%), Gaps = 57/498 (11%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIMSQ 132
           + T L+  +   GK  EA  +F+ +I  G +P +VTY TL+  L  +     +I  + S 
Sbjct: 133 TFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSM 192

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           V++N   P+   +N +I++  +   + EA + F +M   G++P   TYN+LI       +
Sbjct: 193 VQKN-CQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +    LL+ M  +  + P++ ++N +V A C E  +TEA +V+ KM   G++P+VVTY 
Sbjct: 252 WKHVATLLNEMV-DSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYT 310

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR----- 307
            +   +    E D+A +V   M   G  PN  +   +I+GYCK  +I +A+ +       
Sbjct: 311 ALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXX 370

Query: 308 --------------TMKEYGVHPNLVIFNLLIKGFVEIMDRDG----------------- 336
                         TM   G  PN++ +N LI G+ +I   D                  
Sbjct: 371 CCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDT 430

Query: 337 ---------------VDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDD 378
                          + + +AL  E       P+++TY  +++      ++ +   +   
Sbjct: 431 VTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKA 490

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           +  + + PD    +I   G  R  E E A +L   +   G  P+V  ++ +I+G C  G 
Sbjct: 491 IEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGL 550

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +D A ++F +M E+G + N   + T+  G+    +  RA ++LQ M A G     ST  L
Sbjct: 551 LDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTL 610

Query: 499 LAEARRATGLTKEAKRIL 516
             +     GL +  K+IL
Sbjct: 611 FVKMLSDDGLDQSLKQIL 628



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/467 (22%), Positives = 212/467 (45%), Gaps = 20/467 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + ++  L+NS     +   A ++   +++ GH+P   T+TTL+  + ++ +      +  
Sbjct: 96  IYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFD 155

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  PD + +  +IN   + GN   A+     M +    P    YNT+I       
Sbjct: 156 KMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDR 215

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  L   M  +G + P++ TYN L+ A CN         ++++M  S + PDVV++
Sbjct: 216 QVTEAFNLFSEMVTKG-ISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSF 274

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+  A  + G+  +A +V+ +M   GV+PN  T   ++ G+C   ++ EA++   TM  
Sbjct: 275 NTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVC 334

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRD----------------GVDEVLALMKEFRVN---PD 352
            G  PN++ +N LI G+ +I   D                 +DE + +          P+
Sbjct: 335 KGCMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPN 394

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
           VI+Y+T++N +     +DK   +F +M +  + PD   YS L  G    +  + A  L  
Sbjct: 395 VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFH 454

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M+     PN+V +  ++   C +  +  A+ +   +    + P+++     + G   A 
Sbjct: 455 EMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG 514

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +   A ++   + + G+ P   T+ ++       GL  EA ++  ++
Sbjct: 515 ELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREM 561



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/442 (24%), Positives = 213/442 (48%), Gaps = 27/442 (6%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +++C+  V +   +++SL +  +  EA  +F+ ++  G  P + TY +L+ AL     
Sbjct: 192 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 251

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +  + ++++++ ++ + PD + FN V++A  + G + EA D   KM + G+ P   TY  
Sbjct: 252 WKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTYTA 311

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK--------------- 227
           L+ G+ +  + +E+VK+ D M  +G   PN+ +YN L+  +C  +               
Sbjct: 312 LMDGHCLLSEMDEAVKVFDTMVCKG-CMPNVISYNTLINGYCKIQRIDKAIHYTXLMDXX 370

Query: 228 ----NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
               N+ EA  V   M   G  P+V++YNT+   Y +    D+A  +  EM    + P+ 
Sbjct: 371 CCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDT 430

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T   +I G C   ++++A+     M      PNLV + +L+    +      + E +AL
Sbjct: 431 VTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCK---NRYLAEAMAL 487

Query: 344 MKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           +K      ++PD+   +  ++    AG ++  +++F ++   G++PD   YSI+  G  R
Sbjct: 488 LKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCR 547

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
               ++A +L   M E+G   N  I+ TI  G+  +    RAI++  +M   G S +  T
Sbjct: 548 RGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST 607

Query: 461 FETLMWGYSEARQPWRAEEILQ 482
               +   S+       ++IL+
Sbjct: 608 MTLFVKMLSDDGLDQSLKQILR 629



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/373 (25%), Positives = 161/373 (43%), Gaps = 40/373 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIH--- 127
           V + T LM+      +  EA  +F+ ++  G  P++++Y TL+     IQ+   +IH   
Sbjct: 306 VVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIHYTX 365

Query: 128 ---------------SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG 172
                           +   +   G  P+ I +N +IN + +   +++AM  F +M    
Sbjct: 366 LMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQE 425

Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA 232
           L P T TY+TLI G     + ++++ L   M     + PNL TY +L+   C  + + EA
Sbjct: 426 LIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQI-PNLVTYRILLDYLCKNRYLAEA 484

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
             ++  +  S + PD+   N       + GE + A ++   +   G+QP+  T  I+I+G
Sbjct: 485 MALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMING 544

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
            C+ G + EA +  R M E G   N  I+N + +GF+   +     ++L  M     + D
Sbjct: 545 LCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSAD 604

Query: 353 VITYSTIMNAWSTAGFMDKCKEI----------FDDMGKAGIKPDAHAYSILAKGYVREQ 402
             T +  +   S  G     K+I          FD     G+        IL KG   E+
Sbjct: 605 ASTMTLFVKMLSDDGLDQSLKQILRNGCKWISTFDSSSSTGLH-------ILQKGISHER 657

Query: 403 EPE---KAEELLM 412
                 +AEEL M
Sbjct: 658 NESDLVQAEELPM 670



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 75/188 (39%)

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           DG       M   +  P  + ++ ++ + +          +   M   GI P+ +   IL
Sbjct: 43  DGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHIL 102

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
              +        A  +L  +++ G  P+   FTT+I G C +G +  A+ +FDKM   G 
Sbjct: 103 INSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGF 162

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            P++ T+ TL+ G  +      A  +L  M      P    +  + ++        EA  
Sbjct: 163 RPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFN 222

Query: 515 ILSKIKNK 522
           + S++  K
Sbjct: 223 LFSEMVTK 230


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 183/364 (50%), Gaps = 9/364 (2%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD+  FN +++A +++G++      F  M+++ + P   TY  L+KG   AG+  +++ +
Sbjct: 135 PDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSV 194

Query: 200 LDLMS-REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS--GMKPDVVTYNTIAT 256
           LD MS  E +V P++   N +V   C    + +A   + +   S  G  P+ VTYN +A 
Sbjct: 195 LDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAH 254

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A+ + G    A E++ +ME   V PN  T   I+ G C  G++  AL F R  +   V P
Sbjct: 255 AFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRT--VWP 312

Query: 317 ----NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
               N V ++ L+  F+   +     E+   M +   +PD I Y T+++  + AG +D  
Sbjct: 313 EARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDA 372

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             +   M KAG + DA AY+IL  G+ R +   +A ELL  M E+G  P+V  + T++SG
Sbjct: 373 WSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSG 432

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G      E+  KM + G  P++ TF TL+ GY +  Q   A  I + M   G+ P 
Sbjct: 433 LCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPN 492

Query: 493 KSTF 496
              +
Sbjct: 493 TVIY 496



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 205/453 (45%), Gaps = 7/453 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE--E 135
           L+++L + G       +F ++ +   +P++VTY  L+  L    R     S++  +   E
Sbjct: 143 LLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILVKGLCKAGRVGDALSVLDGMSGPE 202

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES--GLTPTTSTYNTLIKGYGIAGKP 193
           + + PD +  N +++   ++G +++A+    +   S  G  P T TYN L   +  AG  
Sbjct: 203 SDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSVHGCAPNTVTYNCLAHAFCRAGNV 262

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH--KMAASGMKPDVVTY 251
             + +L+  M +E  V PN  T N +V   C    +  A       +      + + VTY
Sbjct: 263 GMACELVAKMEKE-RVTPNAVTLNTIVGGLCWVGRVGAALEFFREKRTVWPEARGNAVTY 321

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +T+  A+        A E+  EM   G  P+      +ISG  + G++ +A   A +MK+
Sbjct: 322 STLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDDAWSMATSMKK 381

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G   +   +N+LI GF      +   E+L  MKE  + PDV TY+T+++    AG    
Sbjct: 382 AGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLSGLCKAGDFLA 441

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+   M   G +P    +  L  GY +  + ++A  +  +M ESG  PN VI+ T+I 
Sbjct: 442 VDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQPNTVIYNTLID 501

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             C       AIE+FD+M E  V  N+ TF  L+ G  +   P +A E++ +M+     P
Sbjct: 502 FLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELMDLMREGRCTP 561

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
              T  +L E     G T   K  +      +R
Sbjct: 562 DYVTIDILMEWLPVIGETDRLKHFMQHDTTPKR 594



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 82/149 (55%), Gaps = 1/149 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L + G       +   +I+GG +PS+VT+ TL+       + +    I  
Sbjct: 423 VYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFR 482

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++E+G+ P+++ +N +I+   +S +   A++ F +M+E  +    +T+N L+KG     
Sbjct: 483 SMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKN 542

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLV 220
            PE++ +L+DLM REG   P+  T ++L+
Sbjct: 543 MPEKAFELMDLM-REGRCTPDYVTIDILM 570


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 202/405 (49%), Gaps = 13/405 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +    ++ L +  +  EA  + + ++  G  P+  TY  L+  L    + +    +++
Sbjct: 305 VNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLN 364

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK-MKESGLTPTTSTYNTLIKGYGIA 190
           +V     +P+ + FN +IN +   G ++EA     + M   G  P   TYNTLI G    
Sbjct: 365 KVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKK 420

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    + +L++ M  +G  +PN+ TY +L+  +C E  + EA NV+ +M+  G+  + V 
Sbjct: 421 GYLVSARELMNEMQIKG-CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 479

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN + +A  ++ +   A  +  +M   G +P+  T   +I G CK  K +EAL   + M 
Sbjct: 480 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 539

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE--FRVNP-DVITYSTIMNAWSTAG 367
             GV  N + +N LI  F+    R  + E L L+ +  FR  P D ITY+ ++ A   AG
Sbjct: 540 LEGVIANTITYNTLIHAFLR---RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 596

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            ++K   +F+DM   G+ P+  + +IL  G  R    + A E L  MI  G  P++V + 
Sbjct: 597 NIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYN 656

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM-WGYSEA 471
           ++I+G C  G    A+ +FDK+   G+ P+  T+ TL+ W   E 
Sbjct: 657 SLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG 701



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 217/487 (44%), Gaps = 47/487 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   +M +L    +   A A+  ++   G  P+ + Y TL+ AL+   R N +  ++
Sbjct: 234 TVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLL 293

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G  PD   FN  I+   +   + EA     +M   G TP + TY  L+ G    
Sbjct: 294 EEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRM 353

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK-MAASGMKPDVV 249
           GK +E+  LL+ +       PN+  +N L+  + +   + EA  VMH+ M + G  PD+ 
Sbjct: 354 GKVDEARMLLNKVP-----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIF 408

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG------------ 297
           TYNT+     + G    A E++ EM+  G +PN  T  I+I  +CKEG            
Sbjct: 409 TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 468

Query: 298 -----------------------KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
                                  K+++AL     M   G  P++  FN LI G  ++   
Sbjct: 469 SGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV--- 525

Query: 335 DGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
           +  +E L L ++     V  + ITY+T+++A+   G M +  ++ +DM   G   D   Y
Sbjct: 526 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 585

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + L K   R    EK   L   M+  G +PN +    +I+G C  G++  A+E    M  
Sbjct: 586 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 645

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            G++P++ T+ +L+ G  +  +   A  +   ++  G+ P   T+  L       G+  +
Sbjct: 646 RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDD 705

Query: 512 AKRILSK 518
           A  +LS+
Sbjct: 706 AHLLLSR 712



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 182/376 (48%), Gaps = 2/376 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFN-NLIEGGHKPSLVTYTTLLAALTIQKR 122
           +NK     V     L+N  + RG+  EA+A+ + +++  G  P + TY TL+  L  +  
Sbjct: 363 LNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGY 422

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
             S   +M++++  G +P+ I +  +I+ F + G +EEA +   +M   GL      YN 
Sbjct: 423 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 482

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI       K ++++ +   MS +G  KP++ T+N L+   C      EA  +   M   
Sbjct: 483 LISALCKDEKVQDALNMFGDMSSKG-CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 541

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+  + +TYNT+  A+ + G   +A +++ +M   G   +  T   +I   C+ G I++ 
Sbjct: 542 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 601

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L     M   G++PN +  N+LI G     +     E L  M    + PD++TY++++N 
Sbjct: 602 LALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLING 661

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G   +   +FD +   GI PDA  Y+ L   + +E   + A  LL   ++SGF PN
Sbjct: 662 LCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPN 721

Query: 423 VVIFTTIISGWCSDGS 438
            V +  ++S +  +G 
Sbjct: 722 EVTWYILVSNFIKEGD 737



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 181/379 (47%), Gaps = 12/379 (3%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +N V++        +   + F++M   G++PT  T+  ++K   +  + + +  LL  M+
Sbjct: 203 YNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMT 262

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G V PN   Y  L+ A      + E   ++ +M   G  PDV T+N       +    
Sbjct: 263 RHGCV-PNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRI 321

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A +++  M   G  PN  T G+++ G C+ GK+ EA    R +     +PN+V+FN L
Sbjct: 322 HEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RMLLNKVPNPNVVLFNTL 377

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVN----PDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           I G+V    R  +DE  A+M E  ++    PD+ TY+T++      G++   +E+ ++M 
Sbjct: 378 INGYVS---RGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQ 434

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             G +P+   Y+IL   + +E   E+A  +L  M   G   N V +  +IS  C D  + 
Sbjct: 435 IKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQ 494

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            A+ +F  M   G  P++ TF +L++G  +  +   A  + Q M   GV     T+  L 
Sbjct: 495 DALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLI 554

Query: 501 EARRATGLTKEAKRILSKI 519
            A    G  +EA ++++ +
Sbjct: 555 HAFLRRGAMQEALKLVNDM 573



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 210/463 (45%), Gaps = 7/463 (1%)

Query: 68  SCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           SC  T RS   +++ L+    P+    +F  ++  G  P++ T+  ++ AL +    +S 
Sbjct: 195 SCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSA 254

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
            +++  +  +G  P++I +  +I+A S+ G + E +    +M   G  P  +T+N  I G
Sbjct: 255 CALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHG 314

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
                +  E+ KL+D M   G   PN  TY VL+   C    + EA  +++K+      P
Sbjct: 315 LCKMLRIHEAAKLVDRMLLRG-FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NP 369

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           +VV +NT+   Y   G  D+A+ V+ E M   G  P+  T   +I G CK+G +  A   
Sbjct: 370 NVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAREL 429

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              M+  G  PN++ + +LI  F +    +    VL  M    +  + + Y+ +++A   
Sbjct: 430 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 489

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
              +     +F DM   G KPD   ++ L  G  +  + E+A  L   M+  G   N + 
Sbjct: 490 DEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTIT 549

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           + T+I  +   G+M  A+++ + M   G   +  T+  L+     A    +   + + M 
Sbjct: 550 YNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 609

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEM 528
           + G++P   +  +L      TG  + A   L  + ++  T ++
Sbjct: 610 SKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDI 652



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 75/175 (42%)

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
           +   P   +Y+ +++             +F +M   GI P  + + ++ K      E + 
Sbjct: 194 YSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDS 253

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  LL  M   G  PN +++ T+I      G ++  +++ ++M   G  P++ TF   + 
Sbjct: 254 ACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIH 313

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           G  +  +   A +++  M   G  P   T+ +L       G   EA+ +L+K+ N
Sbjct: 314 GLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN 368


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 218/496 (43%), Gaps = 70/496 (14%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   LM++L + G+ +EA  +   ++EG  +PS+VT+  L++ L   ++F  + +++
Sbjct: 245 TVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVL 304

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++  G+ P+ + +N +I      G+  EA+  F +M   G+  T  TYN + K     
Sbjct: 305 QEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKE 364

Query: 191 GKPEESVKLLDLMSREGN-----------------------------------VKPNLRT 215
           G+ E + K+LD M   G                                    +KPN   
Sbjct: 365 GEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDAL 424

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
               ++  C      EA  +  ++   G+  +V T N +     Q     +A +V+  M 
Sbjct: 425 MTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMV 484

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
           ++GV+ +  T  I+I G CK  K+ EA++    M + G  P+L  FN+ +  +  +   +
Sbjct: 485 NSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVE 544

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
            +  +L  MK   + PD++TY TI++ +  A  M K  E   ++ K G++P+A  Y+ L 
Sbjct: 545 EILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALI 604

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPN--------------------------------- 422
            GY R      A  +L TM  +G  P                                  
Sbjct: 605 GGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIE 664

Query: 423 --VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
             V+ +T II G+C  G +D A+  F +M   G+ PN  T+ TLM+ YS++     A ++
Sbjct: 665 LGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKL 724

Query: 481 LQIMKAFGVHPQKSTF 496
              M + G+ P   ++
Sbjct: 725 FDEMVSLGIVPDSVSY 740



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 107/376 (28%), Positives = 180/376 (47%), Gaps = 4/376 (1%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           KP+    T  +  L    +      I  QV   G+  +    NA+I+   +  NM+EA  
Sbjct: 419 KPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATK 478

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
               M  SG+     TYN +I+G   A K +E+++L D M + G  KP+L T+N+ +  +
Sbjct: 479 VLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRG-FKPDLFTFNIFLHTY 537

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           CN   + E  +++ +M + G+KPD+VTY TI   Y +  +  +A E + E+  NG++PN 
Sbjct: 538 CNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNA 597

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
                +I GY + G I +A+    TMK  G+ P  V +N L+         + V  V A 
Sbjct: 598 VIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQ 657

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
                +   VI Y+ I+  +   G +D+    F +M   GI P+   Y+ L   Y +   
Sbjct: 658 CIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGN 717

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            E+A +L   M+  G  P+ V + T+ISG+C   S+D+ +E   +M    +  +  ++  
Sbjct: 718 KEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNA 777

Query: 464 LMWGYSEARQPWRAEE 479
            + G +    PW  +E
Sbjct: 778 FVDGIT---TPWCQKE 790



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 100/402 (24%), Positives = 197/402 (49%), Gaps = 2/402 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLA-ALTIQKRFNSIHS 128
           +TV +   +  +L + G+ + A+ I + ++  G       + +++A  L    R + +  
Sbjct: 349 QTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLR 408

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++ ++    + P+     A I    +SG  EEA + ++++   GL    +T N LI G  
Sbjct: 409 LIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLC 468

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
                +E+ K+L  M   G V+ +  TYN++++  C    + EA  +   M   G KPD+
Sbjct: 469 QGNNMKEATKVLKAMVNSG-VELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDL 527

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            T+N     Y   G+ ++   ++ +M+  G++P+  T G II GYCK   + +A  +   
Sbjct: 528 FTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTE 587

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           + + G+ PN VI+N LI G+    +      +L  MK   + P  +TY+++M     AG 
Sbjct: 588 LMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGL 647

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +++ K +F       I+     Y+I+ +G+ +  + ++A      M   G  PN + +TT
Sbjct: 648 VEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTT 707

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           ++  +   G+ + A ++FD+M   G+ P+  ++ TL+ G+ E
Sbjct: 708 LMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCE 749



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 220/454 (48%), Gaps = 7/454 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSI 129
           ++++ + L+ +L   G+   A+ +F  + +G    P + TYT ++ AL      ++  ++
Sbjct: 174 SIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVAPDVHTYTAMIKALCRAGEIDAAFAM 233

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           ++++  +G+ P  + +N +++A  +SG +EEA     +M E  + P+  T+  LI G   
Sbjct: 234 LAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLAR 293

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
             +  E   +L  M   G + PN   YN ++   C + + +EA  +  +M + G+K  VV
Sbjct: 294 GQQFGEVGAVLQEMQGFG-ITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVV 352

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK-EGKIKEALRFART 308
           TYN IA A  + GE + AE+++ EM   G+  +      +++ + +  G++   LR  R 
Sbjct: 353 TYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIRE 412

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL--ALMKEFRVNPDVITYSTIMNAWSTA 366
           M    + PN  +    I+   +    +   E+    L K   VN  V T + +++     
Sbjct: 413 MLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVN--VATSNALIHGLCQG 470

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             M +  ++   M  +G++ D   Y+I+ +G  +  + ++A +L   MI+ GF P++  F
Sbjct: 471 NNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTF 530

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
              +  +C+ G ++  + + D+M   G+ P++ T+ T++ GY +A+   +A E L  +  
Sbjct: 531 NIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMK 590

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            G+ P    +  L       G   +A  IL  +K
Sbjct: 591 NGLRPNAVIYNALIGGYGRNGNISDAIGILDTMK 624



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/358 (24%), Positives = 164/358 (45%), Gaps = 36/358 (10%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           MT  +  L + GK +EA  I+  ++  G   ++ T   L+  L           ++  + 
Sbjct: 425 MTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMV 484

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
            +G++ D I +N +I    ++  M+EA+     M + G  P   T+N  +  Y   GK E
Sbjct: 485 NSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVE 544

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           E + LLD M  EG +KP++ TY  ++  +C  K++ +A   + ++  +G++P+ V YN +
Sbjct: 545 EILHLLDQMKSEG-LKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNAL 603

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRT-----------------------C----- 286
              Y +NG    A  ++  M++NG+QP   T                       C     
Sbjct: 604 IGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDI 663

Query: 287 -------GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
                   III G+CK GKI EA+ + + M   G+ PN + +  L+  + +  +++   +
Sbjct: 664 ELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASK 723

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           +   M    + PD ++Y+T+++ +     +DK  E   +M    +K D  +Y+    G
Sbjct: 724 LFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDG 781



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 98/414 (23%), Positives = 190/414 (45%), Gaps = 14/414 (3%)

Query: 88  PQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS-IFFN 146
           P+ +  +  +L+    + SL +   L++ L    RFN +    + + ++     + +   
Sbjct: 91  PRVSTLLLQSLV--ADRASLPSARRLVSRLL---RFNPLSVAAAAIADSHCTATADLLVR 145

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           A +N+    G++  A D F ++   G +P+  T + L++  G  G+ + + K+   M   
Sbjct: 146 ACLNS-PAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDG 204

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
             V P++ TY  +++A C    I  A+ ++ ++  SG++P VVTYN +  A  ++G  ++
Sbjct: 205 KTVAPDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEE 264

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  +   M    V+P+  T GI+ISG  +  +  E     + M+ +G+ PN VI+N +I 
Sbjct: 265 AFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIG 324

Query: 327 GFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
                  +    E L L  E     +   V+TY+ I  A    G M+  ++I D+M  AG
Sbjct: 325 WHCR---KGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAG 381

Query: 384 IKPDAHAYSILAKGYVR-EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           +      ++ +   ++R     +    L+  M+     PN  + T  I   C  G  + A
Sbjct: 382 MMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEA 441

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            E++ ++   G+  N+ T   L+ G  +      A ++L+ M   GV   + T+
Sbjct: 442 AEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITY 495



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 134/279 (48%), Gaps = 1/279 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  EA  + +++I+ G KP L T+   L       +   I  ++ Q++  G+ PD + + 
Sbjct: 507 KMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYG 566

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I+ + ++ +M +A +   ++ ++GL P    YN LI GYG  G   +++ +LD M   
Sbjct: 567 TIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYN 626

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G ++P   TYN L+   C+   + E   V  +     ++  V+ Y  I   + + G+ D+
Sbjct: 627 G-IQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDE 685

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A     EM   G+ PN  T   ++  Y K G  +EA +    M   G+ P+ V +N LI 
Sbjct: 686 AVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLIS 745

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
           GF E+   D + E  A M    +  D  +Y+  ++  +T
Sbjct: 746 GFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITT 784



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/264 (23%), Positives = 119/264 (45%), Gaps = 40/264 (15%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            +++    GK +E   + + +   G KP +VTY T++      K  +  +  ++++ +NG
Sbjct: 533 FLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNG 592

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL-------------- 183
           + P+++ +NA+I  +  +GN+ +A+     MK +G+ PT  TYN+L              
Sbjct: 593 LRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVK 652

Query: 184 ---------------------IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
                                I+G+   GK +E+V     M   G + PN  TY  L+ A
Sbjct: 653 AVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRG-IPPNKMTYTTLMFA 711

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
           +    N  EA  +  +M + G+ PD V+YNT+ + + +    D+  E   EM    ++ +
Sbjct: 712 YSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQD 771

Query: 283 GRTCGIIISG----YCKEGKIKEA 302
           G +    + G    +C++  +  A
Sbjct: 772 GCSYNAFVDGITTPWCQKEAVSNA 795



 Score = 48.5 bits (114), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 30/124 (24%), Positives = 58/124 (46%)

Query: 63  CMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           C+ K+    V   T ++    + GK  EA   F  +   G  P+ +TYTTL+ A +    
Sbjct: 658 CIVKDIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGN 717

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +  ++   G+ PDS+ +N +I+ F E  ++++ +++  +M    L     +YN 
Sbjct: 718 KEEASKLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNA 777

Query: 183 LIKG 186
            + G
Sbjct: 778 FVDG 781


>gi|224065693|ref|XP_002301924.1| predicted protein [Populus trichocarpa]
 gi|222843650|gb|EEE81197.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 219/433 (50%), Gaps = 3/433 (0%)

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           +F ++++   T  +   L+++       ++A  +   + E G+   LV Y+ ++ +L   
Sbjct: 188 AFLLSQKQNLTPLTYNALISACARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSLMKN 247

Query: 121 KRFNS--IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
            R NS  +  I  +++ + ++ D   +N +I  F+++G++++A++    ++ SGL+  T+
Sbjct: 248 NRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTA 307

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           T  T+I G G  G+ EE+  + + M R+  ++P  R YN L+R +     + +A  V+ +
Sbjct: 308 TLVTVIWGLGNCGRTEEAEAIFEEM-RDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSE 366

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  SG+ P+  TY+ +  AY      + A  V+ EME + VQPN      I++ Y  +G+
Sbjct: 367 MERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGE 426

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
            ++  +  R M++ GV P+ + +N+LI  F +    D        M    + PD IT++T
Sbjct: 427 WQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNT 486

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++    AG  D+ +E+F++M + G  P    ++I+   +  ++  +  + LL  M   G
Sbjct: 487 LVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQG 546

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PN V +TT+I  +   G  D AIE  D M   G+ P+   +  L+  Y++     +A 
Sbjct: 547 LLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAGLKPSSTMYNALLNAYAQRGLSDQAV 606

Query: 479 EILQIMKAFGVHP 491
                M+  G+ P
Sbjct: 607 SAFWAMRDDGLKP 619



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 86/378 (22%), Positives = 177/378 (46%), Gaps = 3/378 (0%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV--KLLDL 202
           +NA+I+A + + ++E+A++   +M+E G       Y+ +I+      +   S+  K+   
Sbjct: 202 YNALISACARNNDIEKALNLICRMREDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYRE 261

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           + R+  ++ +++ +N ++  +    ++ +A   +  +  SG+     T  T+       G
Sbjct: 262 IDRD-KLEVDVQLWNDIIVGFAKAGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCG 320

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
             ++AE +  EM  NG+QP  R    ++ GY K G +++A      M+  GV PN   ++
Sbjct: 321 RTEEAEAIFEEMRDNGLQPRTRAYNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYS 380

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           LLI  +      +    VL  M+   V P+   +S I+ ++   G   K  ++  +M  +
Sbjct: 381 LLIDAYGNAERWESARIVLKEMEASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDS 440

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G++PD   Y++L   + +    + A      M+  G  P+ + + T++   C  G  DRA
Sbjct: 441 GVRPDRIFYNVLIDTFGKFNCLDHAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRA 500

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            E+F++M E G  P   TF  ++  + +  +    + +L  M++ G+ P   T+  L + 
Sbjct: 501 EELFEEMMEKGYLPCNTTFNIMINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDI 560

Query: 503 RRATGLTKEAKRILSKIK 520
              +G   +A   L  +K
Sbjct: 561 YGKSGRFDDAIECLDDMK 578



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 190/382 (49%), Gaps = 8/382 (2%)

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           + ++ +I+A  +S  + EA   F   ++  LTP T  YN LI         E+++ L+  
Sbjct: 170 LLYSILIHALGQSEKLYEA---FLLSQKQNLTPLT--YNALISACARNNDIEKALNLICR 224

Query: 203 MSREGNVKPNLRTYNVLVRAWC--NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
           M RE     +L  Y++++R+    N  N +    +  ++    ++ DV  +N I   +A+
Sbjct: 225 M-REDGYPSDLVNYSLIIRSLMKNNRANSSILQKIYREIDRDKLEVDVQLWNDIIVGFAK 283

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
            G+ D+A E +  ++ +G+     T   +I G    G+ +EA      M++ G+ P    
Sbjct: 284 AGDLDKALEFLGVVQGSGLSVKTATLVTVIWGLGNCGRTEEAEAIFEEMRDNGLQPRTRA 343

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           +N L++G+V+       + V++ M+   V P+  TYS +++A+  A   +  + +  +M 
Sbjct: 344 YNALLRGYVKAGLLRDAEFVVSEMERSGVLPNEQTYSLLIDAYGNAERWESARIVLKEME 403

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
            + ++P+A+ +S +   Y  + E +K  ++L  M +SG  P+ + +  +I  +     +D
Sbjct: 404 ASNVQPNAYVFSRILASYRDKGEWQKTFQVLREMEDSGVRPDRIFYNVLIDTFGKFNCLD 463

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            A+  FD+M   G+ P+  T+ TL+  + +A +  RAEE+ + M   G  P  +TF ++ 
Sbjct: 464 HAMATFDRMLSEGIEPDTITWNTLVDCHCKAGKHDRAEELFEEMMEKGYLPCNTTFNIMI 523

Query: 501 EARRATGLTKEAKRILSKIKNK 522
            +        + K +L+ ++++
Sbjct: 524 NSFGDQERWDDVKNLLTNMRSQ 545



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 92/170 (54%), Gaps = 1/170 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++NS  ++ +  + + +  N+   G  P+ VTYTTL+       RF+     +  ++  G
Sbjct: 522 MINSFGDQERWDDVKNLLTNMRSQGLLPNAVTYTTLIDIYGKSGRFDDAIECLDDMKAAG 581

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P S  +NA++NA+++ G  ++A+  FW M++ GL P+    N+LI  +G   +  E+ 
Sbjct: 582 LKPSSTMYNALLNAYAQRGLSDQAVSAFWAMRDDGLKPSLLALNSLINAFGKDRRDVEAF 641

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
            +L  M +E ++KP++ TY  L++A    +   +  +V  +M  SG  PD
Sbjct: 642 VVLQYM-KENDLKPDVVTYTTLMKALILVEKFDKVPSVYEEMILSGCTPD 690



 Score = 42.0 bits (97), Expect = 0.91,   Method: Compositional matrix adjust.
 Identities = 20/71 (28%), Positives = 41/71 (57%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ ++  L+N+  +  +  EA  +   + E   KP +VTYTTL+ AL + ++F+ + S+ 
Sbjct: 620 SLLALNSLINAFGKDRRDVEAFVVLQYMKENDLKPDVVTYTTLMKALILVEKFDKVPSVY 679

Query: 131 SQVEENGMDPD 141
            ++  +G  PD
Sbjct: 680 EEMILSGCTPD 690


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 118/405 (29%), Positives = 202/405 (49%), Gaps = 13/405 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +    ++ L +  +  EA  + + ++  G  P+  TY  L+  L    + +    +++
Sbjct: 287 VNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLN 346

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK-MKESGLTPTTSTYNTLIKGYGIA 190
           +V     +P+ + FN +IN +   G ++EA     + M   G  P   TYNTLI G    
Sbjct: 347 KVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKK 402

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    + +L++ M  +G  +PN+ TY +L+  +C E  + EA NV+ +M+  G+  + V 
Sbjct: 403 GYLVSARELMNEMQIKG-CEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 461

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN + +A  ++ +   A  +  +M   G +P+  T   +I G CK  K +EAL   + M 
Sbjct: 462 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE--FRVNP-DVITYSTIMNAWSTAG 367
             GV  N + +N LI  F+    R  + E L L+ +  FR  P D ITY+ ++ A   AG
Sbjct: 522 LEGVIANTITYNTLIHAFLR---RGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 578

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            ++K   +F+DM   G+ P+  + +IL  G  R    + A E L  MI  G  P++V + 
Sbjct: 579 NIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYN 638

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM-WGYSEA 471
           ++I+G C  G    A+ +FDK+   G+ P+  T+ TL+ W   E 
Sbjct: 639 SLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEG 683



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 216/487 (44%), Gaps = 47/487 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   +M +L    +   A A+  ++   G  P+ + Y TL+ AL    R N +  ++
Sbjct: 216 TVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLL 275

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G  PD   FN  I+   +   + EA     +M   G TP + TY  L+ G    
Sbjct: 276 EEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRM 335

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK-MAASGMKPDVV 249
           GK +E+  LL+ +       PN+  +N L+  + +   + EA  VMH+ M + G  PD+ 
Sbjct: 336 GKVDEARMLLNKVP-----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIF 390

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG------------ 297
           TYNT+     + G    A E++ EM+  G +PN  T  I+I  +CKEG            
Sbjct: 391 TYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEM 450

Query: 298 -----------------------KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
                                  K+++AL     M   G  P++  FN LI G  ++   
Sbjct: 451 SGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKV--- 507

Query: 335 DGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
           +  +E L L ++     V  + ITY+T+++A+   G M +  ++ +DM   G   D   Y
Sbjct: 508 NKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITY 567

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + L K   R    EK   L   M+  G +PN +    +I+G C  G++  A+E    M  
Sbjct: 568 NGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIH 627

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            G++P++ T+ +L+ G  +  +   A  +   ++  G+ P   T+  L       G+  +
Sbjct: 628 RGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDD 687

Query: 512 AKRILSK 518
           A  +LS+
Sbjct: 688 AHLLLSR 694



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 182/376 (48%), Gaps = 2/376 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFN-NLIEGGHKPSLVTYTTLLAALTIQKR 122
           +NK     V     L+N  + RG+  EA+A+ + +++  G  P + TY TL+  L  +  
Sbjct: 345 LNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGY 404

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
             S   +M++++  G +P+ I +  +I+ F + G +EEA +   +M   GL      YN 
Sbjct: 405 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 464

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI       K ++++ +   MS +G  KP++ T+N L+   C      EA  +   M   
Sbjct: 465 LISALCKDEKVQDALNMFGDMSSKG-CKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLE 523

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+  + +TYNT+  A+ + G   +A +++ +M   G   +  T   +I   C+ G I++ 
Sbjct: 524 GVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKG 583

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L     M   G++PN +  N+LI G     +     E L  M    + PD++TY++++N 
Sbjct: 584 LALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSLING 643

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G   +   +FD +   GI PDA  Y+ L   + +E   + A  LL   ++SGF PN
Sbjct: 644 LCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGFIPN 703

Query: 423 VVIFTTIISGWCSDGS 438
            V +  ++S +  +G 
Sbjct: 704 EVTWYILVSNFIKEGD 719



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 181/379 (47%), Gaps = 12/379 (3%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +N V++        +   + F++M   G++PT  T+  ++K   +  + + +  LL  M+
Sbjct: 185 YNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMT 244

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G V PN   Y  L+ A      + E   ++ +M   G  PDV T+N       +    
Sbjct: 245 RHGCV-PNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRI 303

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A +++  M   G  PN  T G+++ G C+ GK+ EA    R +     +PN+V+FN L
Sbjct: 304 HEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RMLLNKVPNPNVVLFNTL 359

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVN----PDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           I G+V    R  +DE  A+M E  ++    PD+ TY+T++      G++   +E+ ++M 
Sbjct: 360 INGYVS---RGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQ 416

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             G +P+   Y+IL   + +E   E+A  +L  M   G   N V +  +IS  C D  + 
Sbjct: 417 IKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQ 476

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            A+ +F  M   G  P++ TF +L++G  +  +   A  + Q M   GV     T+  L 
Sbjct: 477 DALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLI 536

Query: 501 EARRATGLTKEAKRILSKI 519
            A    G  +EA ++++ +
Sbjct: 537 HAFLRRGAMQEALKLVNDM 555



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 111/463 (23%), Positives = 209/463 (45%), Gaps = 7/463 (1%)

Query: 68  SCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           SC  T RS   +++ L+    P+    +F  ++  G  P++ T+  ++ AL +    +S 
Sbjct: 177 SCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSA 236

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
            +++  +  +G  P++I +  +I+A  + G + E +    +M   G  P  +T+N  I G
Sbjct: 237 CALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHG 296

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
                +  E+ KL+D M   G   PN  TY VL+   C    + EA  +++K+      P
Sbjct: 297 LCKMLRIHEAAKLVDRMLLRG-FTPNSFTYGVLMHGLCRMGKVDEARMLLNKVP----NP 351

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           +VV +NT+   Y   G  D+A+ V+ E M   G  P+  T   +I G CK+G +  A   
Sbjct: 352 NVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSAREL 411

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              M+  G  PN++ + +LI  F +    +    VL  M    +  + + Y+ +++A   
Sbjct: 412 MNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCK 471

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
              +     +F DM   G KPD   ++ L  G  +  + E+A  L   M+  G   N + 
Sbjct: 472 DEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTIT 531

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           + T+I  +   G+M  A+++ + M   G   +  T+  L+     A    +   + + M 
Sbjct: 532 YNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMM 591

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEM 528
           + G++P   +  +L      TG  + A   L  + ++  T ++
Sbjct: 592 SKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDI 634



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/175 (21%), Positives = 75/175 (42%)

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
           +   P   +Y+ +++             +F +M   GI P  + + ++ K      E + 
Sbjct: 176 YSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDS 235

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  LL  M   G  PN +++ T+I      G ++  +++ ++M   G  P++ TF   + 
Sbjct: 236 ACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIH 295

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           G  +  +   A +++  M   G  P   T+ +L       G   EA+ +L+K+ N
Sbjct: 296 GLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLLNKVPN 350


>gi|255555231|ref|XP_002518652.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223542033|gb|EEF43577.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 827

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 214/459 (46%), Gaps = 37/459 (8%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           +EA  +F  +   G  P  VT+ TLL      +R      ++ ++E +G  P  + +N++
Sbjct: 305 EEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSL 364

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           I+A++  G + EAM+   +M E G+ P   TY TL+ G+  AG  E ++++   M R   
Sbjct: 365 ISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEM-RAAG 423

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            KPN+ T+N L++   N     E   V  ++      PD+VT+NT+   + QNG   +  
Sbjct: 424 CKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEVS 483

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            V  EM+  G  P   T   +IS Y + G  ++A+   + M E GV P+L  +N ++   
Sbjct: 484 GVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAAL 543

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD------------------ 370
                 +  ++V A MK+ R  P+ +TY ++++A++ +  ++                  
Sbjct: 544 ARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIYSGLTEPVP 603

Query: 371 -----------KC------KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
                      KC      +  F+++ K G  PD    + +   Y R Q   KA E+L  
Sbjct: 604 VLLKTLVLVNSKCDLLMETEHAFEELKKKG-SPDLSTLNAMIAIYGRRQMVAKANEILNF 662

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M ESGF P++  + +++       + +R+ EV  ++   G+ P+L ++ T+++ Y    +
Sbjct: 663 MNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIFAYCRNGR 722

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
              A  I   MK +G+ P   T+     +  A  L ++A
Sbjct: 723 MKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDA 761



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 208/422 (49%), Gaps = 12/422 (2%)

Query: 67  ESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           ES      +  ++  L + GK   A +I NNL + G    +  YT+L+ A     R+   
Sbjct: 177 ESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDA 236

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK-MKESGLTPTTSTYNTLIK 185
             +  ++EE G  P  I +N ++N + + G     +      MK SG+ P   TYNTLI 
Sbjct: 237 VLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLIS 296

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
                   EE+ ++ + M   G   P+  T+N L+  +   +   EA  V+ +M  SG  
Sbjct: 297 CCRRGSLYEEAAQVFEEMKLSG-FSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFS 355

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P +VTYN++ +AYA++G   +A E+  +M   G++P+  T   ++SG+ K G  + A+R 
Sbjct: 356 PSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRI 415

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV---NPDVITYSTIMNA 362
              M+  G  PN+  FN LIK      +R    E++ + +E  +    PD++T++T++  
Sbjct: 416 FGEMRAAGCKPNICTFNALIKMH---GNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAV 472

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +   G   +   +F +M +AG  P+   ++ L   Y R    ++A  +   M+E+G  P+
Sbjct: 473 FGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPD 532

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR----AE 478
           +  +  +++     G  +++ +VF +M +    PN  T+ +L+  Y+ +++  R    AE
Sbjct: 533 LSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAE 592

Query: 479 EI 480
           EI
Sbjct: 593 EI 594



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 191/395 (48%), Gaps = 8/395 (2%)

Query: 112 TLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES 171
            ++  L  + + ++  SI++ + ++G D D   + ++I A++ +G   +A+  F KM+E 
Sbjct: 187 VIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEE 246

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE 231
           G  PT  TYN ++  YG  G P   +  L    +   V P+  TYN L+          E
Sbjct: 247 GCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEE 306

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           A  V  +M  SG  PD VT+NT+   Y ++    +A EV+ EME +G  P+  T   +IS
Sbjct: 307 AAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLIS 366

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE----VLALMKEF 347
            Y ++G ++EA+     M E G+ P++  +  L+ GF    ++ G+DE    +   M+  
Sbjct: 367 AYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGF----EKAGMDEPAMRIFGEMRAA 422

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
              P++ T++ ++      G   +  ++F+++      PD   ++ L   + +     + 
Sbjct: 423 GCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSEV 482

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +   M  +GF P    F T+IS +   GS  +A+ V+ +M E GV+P+L ++  ++  
Sbjct: 483 SGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSSYNAVLAA 542

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            +      ++E++   MK     P + T+  L  A
Sbjct: 543 LARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHA 577



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 220/464 (47%), Gaps = 44/464 (9%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           V + T L+ +    G+ ++A  +F  + E G KP+L+TY  +L     +   ++ I  ++
Sbjct: 217 VYAYTSLITAYASNGRYRDAVLVFKKMEEEGCKPTLITYNVILNVYGKMGMPWSKISGLV 276

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++ +G+ PD   +N +I+        EEA   F +MK SG +P   T+NTL+  YG +
Sbjct: 277 HGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKS 336

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +P+E++++L  M   G   P++ TYN L+ A+  +  + EA  +  +M   G+KPDV T
Sbjct: 337 RRPKEAMEVLKEMEFSG-FSPSIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFT 395

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+ + + + G  + A  +  EM   G +PN  T   +I  +   G+  E ++    ++
Sbjct: 396 YTTLLSGFEKAGMDEPAMRIFGEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIE 455

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEFR---VNPDVITYSTIMNAWSTA 366
                P++V +N L+  F     ++G+D EV  + KE +     P+  T++T+++A+S  
Sbjct: 456 ICNCAPDIVTWNTLLAVF----GQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRC 511

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G   +   ++  M +AG+ PD  +Y+ +     R    E++E++   M +    PN + +
Sbjct: 512 GSFQQAMAVYKRMLEAGVTPDLSSYNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTY 571

Query: 427 TTIISGWCSDGSMDR----AIEVFDKM-----------------------CEHGV----- 454
            +++  + +   ++R    A E++  +                        EH       
Sbjct: 572 CSLLHAYANSKEIERMHTLAEEIYSGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKK 631

Query: 455 --SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             SP+L T   ++  Y   +   +A EIL  M   G  P  +T+
Sbjct: 632 KGSPDLSTLNAMIAIYGRRQMVAKANEILNFMNESGFSPSLATY 675



 Score =  152 bits (384), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 200/467 (42%), Gaps = 39/467 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   L+++    G  +EA  + + ++E G KP + TYTTLL+             I 
Sbjct: 357 SIVTYNSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIF 416

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G  P+   FNA+I      G   E M  F +++     P   T+NTL+  +G  
Sbjct: 417 GEMRAAGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQN 476

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E   +   M R G V P   T+N L+ A+    +  +A  V  +M  +G+ PD+ +
Sbjct: 477 GMDSEVSGVFKEMKRAGFV-PERDTFNTLISAYSRCGSFQQAMAVYKRMLEAGVTPDLSS 535

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +  A A+ G  +Q+E+V  EM+    +PN  T   ++  Y    +I+     A  + 
Sbjct: 536 YNAVLAALARGGLWEQSEKVFAEMKDGRCKPNELTYCSLLHAYANSKEIERMHTLAEEIY 595

Query: 311 EYGVHPNLVIFNLLI-------------KGFVEIMDRDGVD------------------- 338
                P  V+   L+               F E+  +   D                   
Sbjct: 596 SGLTEPVPVLLKTLVLVNSKCDLLMETEHAFEELKKKGSPDLSTLNAMIAIYGRRQMVAK 655

Query: 339 --EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             E+L  M E   +P + TY+++M   S +   ++ +E+  ++   G+KPD  +Y+ +  
Sbjct: 656 ANEILNFMNESGFSPSLATYNSLMYMHSRSENFERSEEVLKEILAKGLKPDLISYNTVIF 715

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
            Y R    + A  +   M   G  P+V+ + T ++ + +D   + AI V   M +HG   
Sbjct: 716 AYCRNGRMKDASRIFSYMKTYGLVPDVITYNTFVASYAADSLFEDAIGVVRYMIKHGCKR 775

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQI--MKAFGVHPQKSTFLLLAE 501
           N  T+ +++ GY   +   RA+ I+ +  +     H  K   L L+E
Sbjct: 776 NQNTYNSIVDGY--CKHSRRADAIMFVSSLNQLDPHVTKEEELRLSE 820



 Score =  125 bits (314), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 106/463 (22%), Positives = 200/463 (43%), Gaps = 60/463 (12%)

Query: 77  KLMNSLIERG-KPQEAQAIFNNLIEGGHKPSLV----TYTTL-------LAALTIQKRFN 124
           ++++SLI+   +  E   + + L E  HK  L     T+ +L       +  L   K+ +
Sbjct: 102 QVLDSLIDPCFEGSELDKVLSQLFEYYHKEELSLSSGTWNSLSMDVLGIIKGLGFYKKCD 161

Query: 125 SIHSIMSQVEENGMDPDSIF----FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
              S+ S V E   D +S+        +I    + G +  A      +++ G       Y
Sbjct: 162 MAMSVFSWVRERE-DFESVLNCSVVAVIITMLGKEGKVSAASSILNNLRKDGFDLDVYAY 220

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN----VM 236
            +LI  Y   G+  ++V +   M  EG  KP L TYNV++  +     +   W+    ++
Sbjct: 221 TSLITAYASNGRYRDAVLVFKKMEEEG-CKPTLITYNVILNVY---GKMGMPWSKISGLV 276

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
           H M +SG+ PD  TYNT+ +   +    ++A +V  EM+ +G  P+  T   ++  Y K 
Sbjct: 277 HGMKSSGVAPDDYTYNTLISCCRRGSLYEEAAQVFEEMKLSGFSPDKVTFNTLLDVYGKS 336

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
            + KEA+   + M+                GF                     +P ++TY
Sbjct: 337 RRPKEAMEVLKEME--------------FSGF---------------------SPSIVTY 361

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           +++++A++  G + +  E+ D M + GIKPD   Y+ L  G+ +    E A  +   M  
Sbjct: 362 NSLISAYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRA 421

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
           +G  PN+  F  +I    + G     ++VF+++     +P++ T+ TL+  + +      
Sbjct: 422 AGCKPNICTFNALIKMHGNRGRFAEMMKVFEEIEICNCAPDIVTWNTLLAVFGQNGMDSE 481

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
              + + MK  G  P++ TF  L  A    G  ++A  +  ++
Sbjct: 482 VSGVFKEMKRAGFVPERDTFNTLISAYSRCGSFQQAMAVYKRM 524



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 136/269 (50%), Gaps = 1/269 (0%)

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            I T   + G+   A  ++  +  +G   +      +I+ Y   G+ ++A+   + M+E 
Sbjct: 187 VIITMLGKEGKVSAASSILNNLRKDGFDLDVYAYTSLITAYASNGRYRDAVLVFKKMEEE 246

Query: 313 GVHPNLVIFNLLIKGFVEI-MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           G  P L+ +N+++  + ++ M    +  ++  MK   V PD  TY+T+++        ++
Sbjct: 247 GCKPTLITYNVILNVYGKMGMPWSKISGLVHGMKSSGVAPDDYTYNTLISCCRRGSLYEE 306

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++F++M  +G  PD   ++ L   Y + + P++A E+L  M  SGF P++V + ++IS
Sbjct: 307 AAQVFEEMKLSGFSPDKVTFNTLLDVYGKSRRPKEAMEVLKEMEFSGFSPSIVTYNSLIS 366

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            +  DG +  A+E+ D+M E G+ P++ T+ TL+ G+ +A     A  I   M+A G  P
Sbjct: 367 AYARDGLLREAMELKDQMVEKGIKPDVFTYTTLLSGFEKAGMDEPAMRIFGEMRAAGCKP 426

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIK 520
              TF  L +     G   E  ++  +I+
Sbjct: 427 NICTFNALIKMHGNRGRFAEMMKVFEEIE 455


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 223/453 (49%), Gaps = 3/453 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L++S  + GK Q+   + + +   G  P+ VTY  L+  L+ +  F     ++
Sbjct: 233 TIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLI 292

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G+   +  +N +I  +   G + EA+    +M   G +PT +TYN+ I G    
Sbjct: 293 GEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKL 352

Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           G+  ++++ L D+++   N+ P++ +YN L+  +C   N+ +A+ +  ++ +  + P +V
Sbjct: 353 GRMSDAMQQLSDMLA--NNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIV 410

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYNT+     + GE + A+++ VEM + G+ P+  T  I+++G CK G +  A  F   M
Sbjct: 411 TYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEM 470

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G+  +   +   I G +++ D      +   M      PD+I Y+ +++     G +
Sbjct: 471 LHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNL 530

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           ++  E+   M   G+ PD   Y+ +   ++      K  E+   M+  G  P+VV +T +
Sbjct: 531 EEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVL 590

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G    G ++RA   F +M E G+ PN+ T+ +L+ G  + R+  +A      M   G+
Sbjct: 591 IHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGI 650

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            P K ++ +L       G  +EA  +  ++ ++
Sbjct: 651 FPNKYSYTILINENCNMGNWQEALSLYKQMLDR 683



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/462 (24%), Positives = 223/462 (48%), Gaps = 13/462 (2%)

Query: 69  CRTVRSMTKLMNSLI----ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           C +     K+++ LI    ++   ++  ++F+ +I+    P +     +L  L  +   +
Sbjct: 157 CVSSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMS 216

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
               +   + E G+ P  + +N +++++ + G +++ +D   +M+  G  P   TYN LI
Sbjct: 217 KAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLI 276

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G    G+ E++  L+  M + G +K +  TYN L+  + N+  + EA ++  +M   G 
Sbjct: 277 NGLSKKGEFEQAKGLIGEMLKTG-LKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGA 335

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P V TYN+      + G    A + + +M  N + P+  +   +I GYC+ G + +A  
Sbjct: 336 SPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFL 395

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN----PDVITYSTIM 360
               ++   + P +V +N L+ G      R G  EV   +K   +N    PD++TY+ ++
Sbjct: 396 LFDELRSIYLFPTIVTYNTLLDGLC----RQGELEVAQQLKVEMINEGIAPDIVTYTILV 451

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           N     G +   +E FD+M   G++ D++AY+    G ++  +  +A  L   M+  GF 
Sbjct: 452 NGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFP 511

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+++I+  ++ G C  G+++ A E+  KM   GV P+  T+ +++  + E  +  +  EI
Sbjct: 512 PDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLRKGREI 571

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              M + G+ P   T+ +L       G  + A    S+++ K
Sbjct: 572 FYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEK 613



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 155/325 (47%), Gaps = 1/325 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L+      G   +A  +F+ L      P++VTY TLL  L  Q        +  
Sbjct: 374 VVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKV 433

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ PD + +  ++N   + G++  A + F +M   GL   +  Y T I G    G
Sbjct: 434 EMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLG 493

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               +  L + M  +G   P+L  YNV+V   C   N+ EA  ++ KM + G+ PD VTY
Sbjct: 494 DTSRAFSLQEEMLAKG-FPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTY 552

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            +I  A+ +NG   +  E+  EM   G+ P+  T  ++I G+  +G+++ A  +   M+E
Sbjct: 553 TSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQE 612

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ PN++ +N LI G  ++   D      A M E  + P+  +Y+ ++N     G   +
Sbjct: 613 KGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQE 672

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAK 396
              ++  M   G++PD+  +S L K
Sbjct: 673 ALSLYKQMLDRGVQPDSCTHSALLK 697



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 30/118 (25%), Positives = 65/118 (55%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + T L++    +G+ + A   F+ + E G  P+++TY +L+  L   +R +  ++  
Sbjct: 583 SVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFF 642

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +++ E G+ P+   +  +IN     GN +EA+  + +M + G+ P + T++ L+K  G
Sbjct: 643 AEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLG 700


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 194/422 (45%), Gaps = 9/422 (2%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD--PDSIFFNAVINAFSESGNMEEA 161
           +P +VTY  L+  L    R      ++  +    +D  PD +  N V++   +SG ++EA
Sbjct: 169 RPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA 228

Query: 162 MDTFWKMKES---GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
           +  F + + S   G  P T TYN LI  +   G    + +L++ M  EG V  N+ T N 
Sbjct: 229 L-AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEG-VPQNIVTLNT 286

Query: 219 LVRAWCNEKNITEAWNVMH--KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           +V   C       A       +      K + VTY+T+  A         A E+  E   
Sbjct: 287 IVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMS 346

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G  P+      +ISG  + G++++A   A +MKE G   +   +N+LI GF        
Sbjct: 347 EGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHE 406

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             E+L  MKE  + PDV TY+T+++    AG      E+   M   G +P    +  L  
Sbjct: 407 AYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVH 466

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           GY +  + ++A  +L +M ESG HPN VI+ T+I   C  G +D AIE+FD+M E  V  
Sbjct: 467 GYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPA 526

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N+ TF  L+ G  +   P +A E++  M+     P   T  +L E     G T   KR +
Sbjct: 527 NVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRFM 586

Query: 517 SK 518
            +
Sbjct: 587 QQ 588



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 191/393 (48%), Gaps = 16/393 (4%)

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           D   FN+++ A +   ++      +  M+  + + P   TY  L+ G   AG+  +++++
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 200 LDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS--GMKPDVVTYNTIAT 256
           LD MSR+  +++P++ T N +V   C    + EA   + +  +S  G  P+ VTYN +  
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A+ + G    A E++ +ME+ GV  N  T   I+ G C+ G+   AL F R  +   V P
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRT--VWP 312

Query: 317 ----NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV---NPDVITYSTIMNAWSTAGFM 369
               N V ++ L+     ++  + V   + L  E      +PD I Y T+++  + AG +
Sbjct: 313 EGKGNAVTYSTLVGA---LLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRL 369

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +    +   M +AG K D  AY+IL  G+ R++   +A ELL  M E G  P+V  + T+
Sbjct: 370 EDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTL 429

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           +SG C  G      E+  KM + G  P++ TF TL+ GY +  +   A  IL+ M   G+
Sbjct: 430 LSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGI 489

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           HP    +  L +     G    A  +  ++K K
Sbjct: 490 HPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 1/251 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L+ +L+       A  +F+  +  GH P  + Y T+++ LT   R     S+ S ++E
Sbjct: 322 STLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE 381

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G   D+  +N +I  F     + EA +   +MKE G+ P   TYNTL+ G   AG    
Sbjct: 382 AGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAA 441

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
             +LL  M  +G  +P++ T+  LV  +C    I EA  ++  M  SG+ P+ V YNT+ 
Sbjct: 442 VDELLGKMIDDG-CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLI 500

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G+ D A E+  EM+   V  N  T   ++ G   +   ++A      M+E    
Sbjct: 501 DFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCF 560

Query: 316 PNLVIFNLLIK 326
           P+ V  ++L++
Sbjct: 561 PDYVTVDVLME 571



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/228 (22%), Positives = 110/228 (48%), Gaps = 1/228 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L + G+ ++A ++ +++ E G K     Y  L+A    +KR +  + ++ +++E G
Sbjct: 359 MISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVG 418

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N +++   ++G+     +   KM + G  P+  T+ TL+ GY   GK +E++
Sbjct: 419 IRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEAL 478

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L  M   G + PN   YN L+   C   ++  A  +  +M    +  +V T+N +   
Sbjct: 479 RILRSMDESG-IHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKG 537

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
                  ++A E++ +M      P+  T  +++      G+     RF
Sbjct: 538 LRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEWLPVIGETDRLKRF 585



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 68/264 (25%), Positives = 118/264 (44%), Gaps = 24/264 (9%)

Query: 37  NNPGEKKQLYSNSKPTDSQPQTHCSFCMN---------KESCRTVRSM--------TKLM 79
           NN G   +L+         P     F M          +++C    SM        TK  
Sbjct: 332 NNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAY 391

Query: 80  NSLI----ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           N LI     + +  EA  +   + E G +P + TY TLL+       F ++  ++ ++ +
Sbjct: 392 NILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMID 451

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +G  P  I F  +++ + + G ++EA+     M ESG+ P    YNTLI      G  + 
Sbjct: 452 DGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDL 511

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE-AWNVMHKMAASGMKPDVVTYNTI 254
           +++L D M +E +V  N+ T+N L++    +KN+ E A+ +M +M      PD VT + +
Sbjct: 512 AIELFDEM-KEKSVPANVTTFNALLKGL-RDKNMPEKAFELMDQMREERCFPDYVTVDVL 569

Query: 255 ATAYAQNGEADQAEEVIVEMEHNG 278
                  GE D+ +  + + EH  
Sbjct: 570 MEWLPVIGETDRLKRFMQQGEHTA 593


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 222/477 (46%), Gaps = 21/477 (4%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  E C     +   L+  LI+  K  +A A+   + E G  P ++ YTTL+     +  
Sbjct: 484 MEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHE 543

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F++   +   +E+NG+ PD   +N + +A  +SG  EEA   +  +   G+  T  TY +
Sbjct: 544 FDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEA---YSFLVRKGVVLTKVTYTS 600

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+ G+  AG  + +  L++ M  EG  K +L TY+VL++A C +K + EA +++ +M  S
Sbjct: 601 LVDGFSKAGNTDFAAVLIEKMVNEG-CKADLYTYSVLLQALCKQKKLNEALSILDQMTVS 659

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+K ++V Y  I +   + G+ D A+ +  EM  +G +P+  T  + IS YCK G+I+EA
Sbjct: 660 GVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEA 719

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M+  GV P++V +++ I G   +   D     L  M +    P+  TY  ++  
Sbjct: 720 EHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKH 779

Query: 363 W-----------STAGF-----MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
           +            T+G      ++   ++ + M K G+ P    YS +  G+ +    E+
Sbjct: 780 FLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEE 839

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  LL  M+     PN  I+T +I   C      + +     M E G  P L+++  L+ 
Sbjct: 840 ACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIV 899

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           G  +     RA+ +   +     +  +  + +L +     G      ++L+ + N+ 
Sbjct: 900 GLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRH 956



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/450 (26%), Positives = 205/450 (45%), Gaps = 5/450 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R   S T L+  L E    +EA  +   +++ G   +L  YT L+  L  + R +    +
Sbjct: 247 RNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGL 306

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++   G+ P    +NA+I+ + +SG M++A+     M+++G  P   TYN+LI G   
Sbjct: 307 LDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL-C 365

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            GK +E+ +LL+     G   P + T+  L+  +C  + I +A  V   M +S  K D+ 
Sbjct: 366 GGKLDEAEELLNGAIARG-FTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQ 424

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y  +     +     +A+E + EM  NG+ PN      II GYCK G +  AL   + M
Sbjct: 425 AYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLM 484

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +  G HPN   +  LI G ++         ++  M+E  + P VI Y+T++         
Sbjct: 485 EHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEF 544

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D    +F+ M K G+ PD  AY++L     +    E+A   L   +  G     V +T++
Sbjct: 545 DNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVLTKVTYTSL 601

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+   G+ D A  + +KM   G   +L T+  L+    + ++   A  IL  M   GV
Sbjct: 602 VDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGV 661

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKI 519
                 + ++       G    AK + +++
Sbjct: 662 KCNIVAYTIIISEMIKEGKHDHAKSLFNEM 691



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 186/365 (50%), Gaps = 6/365 (1%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           + S + + G+ PD++ +N +I A+ + G++  A   F  ++ESG+   T T N L+ GY 
Sbjct: 166 LYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYC 225

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
                 ++  LL +M   G  + N  +Y +L++     + + EA  ++  M   G   ++
Sbjct: 226 RTSDLRKACWLLMMMPLMG-CRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNL 284

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
             Y  +     + G    A  ++ EM   GV P+  T   +I GYCK G++K+AL     
Sbjct: 285 HMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKAL 344

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL--ALMKEFRVNPDVITYSTIMNAWSTA 366
           M++ G +P+   +N LI G       D  +E+L  A+ + F   P VIT++ ++N +  A
Sbjct: 345 MEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGF--TPTVITFTNLINGYCKA 401

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             +D    +  +M  +  K D  AY +L    +++   ++A+E L  M  +G  PNVVI+
Sbjct: 402 ERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIY 461

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           T+II G+C  G +  A+EVF  M   G  PN  T+ +L++G  + ++  +A  ++  M+ 
Sbjct: 462 TSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQE 521

Query: 487 FGVHP 491
            G+ P
Sbjct: 522 DGITP 526



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 119/478 (24%), Positives = 209/478 (43%), Gaps = 38/478 (7%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           + SL+     +    ++++L++ G  P  VTY T++ A   +      H     + E+GM
Sbjct: 151 LRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGM 210

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
             D+   NA++  +  + ++ +A      M   G      +Y  LI+G   A    E++ 
Sbjct: 211 QMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCVREALV 270

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           L+ +M ++G    NL  Y +L++  C E  I +A  ++ +M   G+ P V TYN +   Y
Sbjct: 271 LVFMMVQDG-CSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGY 329

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRT--------CG----------------------- 287
            ++G    A  +   ME NG  P+  T        CG                       
Sbjct: 330 CKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGGKLDEAEELLNGAIARGFTPTVI 389

Query: 288 ---IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
               +I+GYCK  +I +ALR    M       +L  + +LI   ++        E L  M
Sbjct: 390 TFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEM 449

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
               + P+V+ Y++I++ +   G +    E+F  M   G  P+A  Y  L  G +++++ 
Sbjct: 450 FANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKL 509

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            KA  L+  M E G  P V+ +TT+I G C     D A  +F+ M ++G++P+ + +  L
Sbjct: 510 HKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVL 569

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
                ++    RAEE    +   GV   K T+  L +     G T  A  ++ K+ N+
Sbjct: 570 TDALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE 624



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/370 (24%), Positives = 163/370 (44%), Gaps = 17/370 (4%)

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           SF + K    T  + T L++   + G    A  +   ++  G K  L TY+ LL AL  Q
Sbjct: 584 SFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQ 643

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
           K+ N   SI+ Q+  +G+  + + +  +I+   + G  + A   F +M  SG  P+ +TY
Sbjct: 644 KKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTY 703

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
              I  Y   G+ EE+  L+  M R+G V P++ TY++ +    +   +  A++ + +M 
Sbjct: 704 TVFISSYCKIGQIEEAEHLIGEMERDG-VTPDVVTYHIFINGCGHMGYMDRAFSTLKRMV 762

Query: 241 ASGMKPDVVTY----------NTIATAYAQNG------EADQAEEVIVEMEHNGVQPNGR 284
            +  +P+  TY          + I   Y          E +   +++  M  +G+ P   
Sbjct: 763 DASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPTVV 822

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T   II+G+CK  +++EA      M    + PN  I+ +LIK   +I         +  M
Sbjct: 823 TYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVTDM 882

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            EF   P + +Y  ++      G  D+ K +F D+       +  A+ IL  G ++    
Sbjct: 883 IEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDGLLKAGHV 942

Query: 405 EKAEELLMTM 414
           +   +LL  M
Sbjct: 943 DFCSQLLAAM 952


>gi|302826103|ref|XP_002994591.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
 gi|300137362|gb|EFJ04342.1| hypothetical protein SELMODRAFT_138844 [Selaginella moellendorffii]
          Length = 599

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 221/488 (45%), Gaps = 36/488 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            +R    L++     G    A+A F  +     KP++  YT+L+ A    +      +  
Sbjct: 16  VLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVACT 75

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+  +   F ++I+ ++ +GN E A   F K K   L P    YN++++ Y  A
Sbjct: 76  EEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYCQA 135

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E    LL  M  EG  + NL  Y  ++  +   ++  +  +  H++ A G+ P   T
Sbjct: 136 GNMETVEALLAQMEEEG-FQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAAT 194

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  I   + + G   +A +++ EM+ +GV PN     +I+ GY + G    A +    M 
Sbjct: 195 YGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMV 254

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P++VI+N+L+  F +    D    VL  ++  R+ P + TY++I++ +   G + 
Sbjct: 255 SAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQ 314

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN-------- 422
           K  E+FD +  AG++P   +Y+ L  G  + ++ E A  +L  M+ +G  PN        
Sbjct: 315 KALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALT 374

Query: 423 ---------------------------VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
                                      +V +  ++   C  G+M RA EVF ++ + G+ 
Sbjct: 375 EGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLK 434

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
            N  T+ T++ G++   +  +A ++L  M+  G H     +    +A   +G T+E    
Sbjct: 435 HNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSGDTEEVTET 494

Query: 516 LSKIKNKE 523
           L+ ++ K+
Sbjct: 495 LAVMREKK 502



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 197/413 (47%), Gaps = 1/413 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ +  + G  +  +A+   + E G + +L  YTT+L      +      S   +++  G
Sbjct: 128 IVQAYCQAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACG 187

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P +  +  ++  F+++GNM +A+D   +M + G++P    Y  ++ GY   G    + 
Sbjct: 188 LSPTAATYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAF 247

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+ + M   G +KP++  YN+LV A+C    + +A  V+  + A+ + P + TY +I   
Sbjct: 248 KVWEDMVSAG-LKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDG 306

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G   +A EV   ++  G++P   +   ++SG  K  +++ A      M   GV PN
Sbjct: 307 YVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPN 366

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +  L +G+    D +    +   MK+  +  D++ Y  ++ A   +G M +  E+F 
Sbjct: 367 ERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQ 426

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +  AG+K +   Y  +  G+ R+ E  KA +LL  M + GFH + + +T+ I      G
Sbjct: 427 QITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTICYTSFIKACFRSG 486

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
             +   E    M E  +  N +T+ TL+ G+  A  P +A    +  KA G+ 
Sbjct: 487 DTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAKASGLQ 539



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 75/322 (23%), Positives = 162/322 (50%), Gaps = 1/322 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M+     G    A  ++ +++  G KP +V Y  L+ A     R +    ++  +E N 
Sbjct: 233 IMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANR 292

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P    + ++++ + + GN+++A++ F ++K +GL P   +YN+L+ G   A + E + 
Sbjct: 293 LLPTIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENAR 352

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L+ M   G V PN R+Y  L   +    ++ +A+ +  +M    +  D+V Y  +  A
Sbjct: 353 LMLNEMLANG-VVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKA 411

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             ++G   +A EV  ++   G++ N  T   ++ G+ ++G++ +A      M+++G H +
Sbjct: 412 CCKSGAMQRAAEVFQQITDAGLKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLD 471

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +   IK      D + V E LA+M+E ++  +  TY+T+++ W  A   D+    ++
Sbjct: 472 TICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYE 531

Query: 378 DMGKAGIKPDAHAYSILAKGYV 399
               +G++ D+   + L  G +
Sbjct: 532 QAKASGLQLDSALSNCLLSGLI 553



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/381 (23%), Positives = 158/381 (41%), Gaps = 70/381 (18%)

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           KP LR Y +LV  +    +   A      M AS +KP+V  Y ++  AYA+  + + A  
Sbjct: 14  KPVLREYGLLVDFYARHGDKVAARATFEAMRASHIKPNVHIYTSLIHAYAEARDMEGAVA 73

Query: 270 VIVEMEHNGVQ-----------------------------------PNGRTCGIIISGYC 294
              EM   G+Q                                   P G     I+  YC
Sbjct: 74  CTEEMLSQGIQLNEAVFCSIISGYASAGNNEAAEHWFEKFKAENLVPGGIVYNSIVQAYC 133

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           + G ++        M+E G   NL ++  ++ GF EI D +        +K   ++P   
Sbjct: 134 QAGNMETVEALLAQMEEEGFQGNLGLYTTVLNGFAEIRDEEKCLSFFHRLKACGLSPTAA 193

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           TY  I+  ++ AG M K  +I ++M K G+ P+   Y+++  GY R  +   A ++   M
Sbjct: 194 TYGCIVKLFTKAGNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDM 253

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMD---------------------------------- 440
           + +G  P++VI+  ++  +C  G MD                                  
Sbjct: 254 VSAGLKPDIVIYNILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNI 313

Query: 441 -RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
            +A+EVFD++   G+ P + ++ +L+ G ++ARQ   A  +L  M A GV P + ++  L
Sbjct: 314 QKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTAL 373

Query: 500 AEARRATGLTKEAKRILSKIK 520
            E     G  ++A  +  ++K
Sbjct: 374 TEGYARAGDVEKAFGMFQRMK 394



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/382 (20%), Positives = 168/382 (43%), Gaps = 36/382 (9%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   +A  I   + + G  P+ + Y  ++        F +   +   +   G+ PD + +
Sbjct: 206 GNMAKALDILEEMDKHGVSPNKMIYAMIMDGYARGGDFTAAFKVWEDMVSAGLKPDIVIY 265

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +++AF ++G M++A+     ++ + L PT  TY +++ GY   G  ++++++ D +  
Sbjct: 266 NILVHAFCKAGRMDKALGVLENIEANRLLPTIETYTSILDGYVKGGNIQKALEVFDRIKT 325

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G ++P + +YN L+      + +  A  ++++M A+G+ P+  +Y  +   YA+ G+ +
Sbjct: 326 AG-LRPGVVSYNSLLSGLAKARQMENARLMLNEMLANGVVPNERSYTALTEGYARAGDVE 384

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  +   M+   +  +    G ++   CK G ++ A    + + + G+  N        
Sbjct: 385 KAFGMFQRMKKENLAIDIVAYGALLKACCKSGAMQRAAEVFQQITDAGLKHNR------- 437

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                                       ITY T+++ W+  G + K +++ +DM K G  
Sbjct: 438 ----------------------------ITYCTMLDGWARKGELSKARDLLNDMQKHGFH 469

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
            D   Y+   K   R  + E+  E L  M E     N   +TT+I GW +    D+AI  
Sbjct: 470 LDTICYTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISC 529

Query: 446 FDKMCEHGVSPNLKTFETLMWG 467
           +++    G+  +      L+ G
Sbjct: 530 YEQAKASGLQLDSALSNCLLSG 551



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 54/259 (20%), Positives = 128/259 (49%), Gaps = 1/259 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ + T +++  ++ G  Q+A  +F+ +   G +P +V+Y +LL+ L   ++  +   ++
Sbjct: 296 TIETYTSILDGYVKGGNIQKALEVFDRIKTAGLRPGVVSYNSLLSGLAKARQMENARLML 355

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++  NG+ P+   + A+   ++ +G++E+A   F +MK+  L      Y  L+K    +
Sbjct: 356 NEMLANGVVPNERSYTALTEGYARAGDVEKAFGMFQRMKKENLAIDIVAYGALLKACCKS 415

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  + + ++   ++  G +K N  TY  ++  W  +  +++A ++++ M   G   D + 
Sbjct: 416 GAMQRAAEVFQQITDAG-LKHNRITYCTMLDGWARKGELSKARDLLNDMQKHGFHLDTIC 474

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y +   A  ++G+ ++  E +  M    ++ N RT   +I G+       +A+      K
Sbjct: 475 YTSFIKACFRSGDTEEVTETLAVMREKKLEVNARTYTTLIHGWLAAADPDQAISCYEQAK 534

Query: 311 EYGVHPNLVIFNLLIKGFV 329
             G+  +  + N L+ G +
Sbjct: 535 ASGLQLDSALSNCLLSGLI 553


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 214/435 (49%), Gaps = 1/435 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LMN L + G+ +EA+A+ + +   G KP++V Y TL+     + +      I++++   G
Sbjct: 321 LMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAG 380

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ I ++ +I    + G +  A     +M + G  P T TY+ L++G+      + + 
Sbjct: 381 VQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAF 440

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL+ M R   + PN  TY +++   C      EA N++ +M + G+KP+   Y  +   
Sbjct: 441 ELLNEM-RNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIG 499

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           +++ G    A E +  M    V P+      +I G    G+I+EA  +   +++ G+ P+
Sbjct: 500 HSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPD 559

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              ++ LI G+ +  + +  D++L  M    + P+  TY+ ++  +  +   +K   I  
Sbjct: 560 EFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQ 619

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M  +G KPD H Y I+ +   R +  E A  +L  + ++G  P++ I++++ISG C   
Sbjct: 620 SMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMA 679

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            M++A+ + D+M + G+ P +  +  L+ G+  +    RA  +   + A G+ P   T+ 
Sbjct: 680 DMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYT 739

Query: 498 LLAEARRATGLTKEA 512
            L +     G   +A
Sbjct: 740 ALIDGNCKNGDITDA 754



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 204/423 (48%), Gaps = 1/423 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++  ++ GK  EA  I N +I  G +P+ + Y  L+  L    +      +++++ + G
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD+  ++ ++    +  + + A +   +M+ SG+ P   TY  +I G    G+ +E+ 
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ M  EG +KPN   Y  L+     E +I+ A   +  M  + + PD+  YN++   
Sbjct: 476 NLLEEMISEG-LKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKG 534

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            +  G  ++AEE   +++  G+ P+  T   +I GYCK   +++A +  + M   G+ PN
Sbjct: 535 LSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPN 594

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +  L++G+ +  D + V  +L  M      PD   Y  ++   S +  M+    +  
Sbjct: 595 ADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLT 654

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           ++ K G+ PD H YS L  G  +  + EKA  LL  M + G  P +V +  +I G+C  G
Sbjct: 655 EVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSG 714

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            + RA  VFD +   G+ PN  T+  L+ G  +      A ++ + M   G+ P    + 
Sbjct: 715 DISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYN 774

Query: 498 LLA 500
           +LA
Sbjct: 775 VLA 777



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/425 (25%), Positives = 205/425 (48%), Gaps = 1/425 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++  + G  + A  +   + + G  P+      LL  L        +  +   +E  G
Sbjct: 181 LVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAG 240

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   ++  + A  ++ + + A   F +M+         TYN +I G   +G  EE+ 
Sbjct: 241 IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 300

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
              + M   G + P+  TY  L+   C    + EA  ++ +M+ SG+KP+VV Y T+   
Sbjct: 301 GFKEEMVDYG-LSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDG 359

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G+A +A +++ EM   GVQPN      +I G CK G++  A +    M + G  P+
Sbjct: 360 FMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPD 419

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              ++ L++G  +  D+DG  E+L  M+   + P+  TY  ++N     G   +   + +
Sbjct: 420 TFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLE 479

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G+KP+A  Y+ L  G+ +E     A E L  M ++   P++  + ++I G  + G
Sbjct: 480 EMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVG 539

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ A E + ++ + G+ P+  T+  L+ GY + R   +A+++LQ M   G+ P   T+ 
Sbjct: 540 RIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYT 599

Query: 498 LLAEA 502
            L E 
Sbjct: 600 DLLEG 604



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 199/408 (48%), Gaps = 10/408 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N L + G+ +EA  +   +I  G KP+   Y  L+   + +   +     +  + +  
Sbjct: 461 MINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKAN 520

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N++I   S  G +EEA + + ++++ GL P   TY+ LI GY      E++ 
Sbjct: 521 VLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKAD 580

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL  M   G +KPN  TY  L+  +    +  +  +++  M  SG KPD   Y  +   
Sbjct: 581 QLLQQMLNSG-LKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRN 639

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            +++   + A  V+ E+E NG+ P+      +ISG CK   +++A+     M + G+ P 
Sbjct: 640 LSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPG 699

Query: 318 LVIFNLLIKGFVEIMD----RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           +V +N LI GF    D    R+  D +LA      + P+ +TY+ +++     G +    
Sbjct: 700 IVCYNALIDGFCRSGDISRARNVFDSILAK----GLLPNCVTYTALIDGNCKNGDITDAF 755

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           +++ DM   GI PDA  Y++LA G     + E+A  L   M   G+  +V +F+T++ G+
Sbjct: 756 DLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGY-AHVSLFSTLVRGF 814

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           C  G +    ++   M +  + PN +T E ++  + +A +   A  + 
Sbjct: 815 CKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVF 862



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 175/366 (47%), Gaps = 5/366 (1%)

Query: 160 EAMDTFWKMKE----SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
           +AM+  WK+K     +G+ P   TY+T ++ +  A   + + K+ + M R  +   N  T
Sbjct: 224 DAMELVWKLKGFMEGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRR-DCAMNEVT 282

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           YNV++   C    + EA+    +M   G+ PD  TY  +     + G   +A+ ++ EM 
Sbjct: 283 YNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMS 342

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
            +G++PN      ++ G+ KEGK  EA      M   GV PN ++++ LI+G  +I    
Sbjct: 343 CSGLKPNVVVYATLVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLG 402

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
              ++L  M +    PD  TY  +M         D   E+ ++M  +GI P+A+ Y I+ 
Sbjct: 403 RASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMI 462

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G  +  E ++A  LL  MI  G  PN  ++  +I G   +G +  A E  + M +  V 
Sbjct: 463 NGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVL 522

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P+L  + +L+ G S   +   AEE    ++  G+ P + T+  L      T   ++A ++
Sbjct: 523 PDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQL 582

Query: 516 LSKIKN 521
           L ++ N
Sbjct: 583 LQQMLN 588



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 176/378 (46%), Gaps = 1/378 (0%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
            + +++ + ++G++  A      M + GL PT    N L+K    A   E   KL   M 
Sbjct: 178 LDVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFME 237

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
             G + P++ TY+  + A C  ++   A  V  +M       + VTYN + +   ++G  
Sbjct: 238 GAG-IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAV 296

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           ++A     EM   G+ P+  T G +++G CK G++KEA      M   G+ PN+V++  L
Sbjct: 297 EEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATL 356

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           + GF++        ++L  M    V P+ I Y  ++      G + +  ++ ++M K G 
Sbjct: 357 VDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGH 416

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           +PD   Y  L +G+ +  + + A ELL  M  SG  PN   +  +I+G C +G    A  
Sbjct: 417 RPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGN 476

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + ++M   G+ PN   +  L+ G+S+      A E L+ M    V P    +  L +   
Sbjct: 477 LLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLS 536

Query: 505 ATGLTKEAKRILSKIKNK 522
             G  +EA+   ++++ +
Sbjct: 537 TVGRIEEAEEYYAQVQKR 554



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 120/244 (49%), Gaps = 2/244 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+    +    ++  +I  +++  G KP    Y  ++  L+  +       ++++V
Sbjct: 597 TYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEV 656

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+NG+ PD   ++++I+   +  +ME+A+    +M + GL P    YN LI G+  +G  
Sbjct: 657 EKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDI 716

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +  + D +  +G + PN  TY  L+   C   +IT+A+++   M   G+ PD   YN 
Sbjct: 717 SRARNVFDSILAKG-LLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNV 775

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +AT  +   + +QA  +  EM + G   +      ++ G+CK G+++E  +    M +  
Sbjct: 776 LATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVMMDRE 834

Query: 314 VHPN 317
           + PN
Sbjct: 835 IVPN 838



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 42/201 (20%), Positives = 93/201 (46%), Gaps = 2/201 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L++ L +    ++A  + + + + G +P +V Y  L+         +   ++   +  
Sbjct: 669 SSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILA 728

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ P+ + + A+I+   ++G++ +A D +  M + G+ P    YN L  G   A   E+
Sbjct: 729 KGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQ 788

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++ L + M   G    +L  ++ LVR +C    + E   ++H M    + P+  T   + 
Sbjct: 789 ALFLTEEMFNRGYAHVSL--FSTLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVI 846

Query: 256 TAYAQNGEADQAEEVIVEMEH 276
           T + + G+  +A  V  E++ 
Sbjct: 847 TEFGKAGKLCEAHRVFAELQQ 867


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 193/367 (52%), Gaps = 1/367 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A +I   +++ G++P  VT  +L+     + R +   S++ ++ E G  PD + +NA+I+
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           +  ++  + +A D F +++  G+ P   TY  L+ G   + +  ++ +LL  M ++  + 
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KIT 257

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN+ TY+ L+ A+     + EA  +  +M    + PD+VTY+++      +   D+A ++
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQM 317

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
              M   G   +  +   +I+G+CK  ++++ ++  R M + G+  N V +N LI+GF +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
             D D   E  + M  F ++PD+ TY+ ++      G ++K   IF+DM K  +  D   
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ + +G  +  + E+A  L  ++   G  P++V +TT++SG C+ G +     ++ KM 
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497

Query: 451 EHGVSPN 457
           + G+  N
Sbjct: 498 QEGLMKN 504



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/472 (22%), Positives = 227/472 (48%), Gaps = 3/472 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A  +F+++++    PS+V +  LL+A+   K+++ + S+  ++E  G+  D   FN
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            VIN F     +  A+    KM + G  P   T  +L+ G+    +  ++V L+D M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  KP++  YN ++ + C  K + +A++   ++   G++P+VVTY  +      +     
Sbjct: 185 G-YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  ++ +M    + PN  T   ++  + K GK+ EA      M    + P++V ++ L+ 
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVN 303

Query: 327 GFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           G   + DR D  +++  LM       DV++Y+T++N +  A  ++   ++F +M + G+ 
Sbjct: 304 GLC-LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
            +   Y+ L +G+ +  + +KA+E    M   G  P++  +  ++ G C +G +++A+ +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F+ M +  +  ++ T+ T++ G  +  +   A  +   +   G+ P   T+  +      
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482

Query: 506 TGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQ 557
            GL  E + + +K+K +          D  +     L  K  +    P+LL+
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLK 534



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 44/283 (15%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+++ ++ GK  EA+ +F  ++     P +VTY++L+  L +  R +  + +  
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFD 319

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G   D + +N +IN F ++  +E+ M  F +M + GL   T TYNTLI+G+  AG
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVL-------------------------------- 219
             +++ +    M   G + P++ TYN+L                                
Sbjct: 380 DVDKAQEFFSQMDFFG-ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438

Query: 220 ---VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
              +R  C    + EAW++   ++  G+KPD+VTY T+ +     G   + E +  +M+ 
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
            G+  N  T          +G I  +    + M   G  P+L+
Sbjct: 499 EGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSLL 533


>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 401

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 199/378 (52%), Gaps = 17/378 (4%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD--PDSIFFN 146
           ++A+ +F+ L+  G  P + +Y  LL  L  + R      ++  + ++G D  PD + ++
Sbjct: 34  EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            VIN F + G+++       KM +  ++P   TYN++I     A   ++++++L  M + 
Sbjct: 93  TVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G V P+  TYN +V  +C+     EA   + KM + G++PDVVTYN++     +NG   +
Sbjct: 146 G-VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 204

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A ++   M   G++P+  T G ++ GY  +G + E       M   G+HPN  +F++L+ 
Sbjct: 205 ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 264

Query: 327 GFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
            + +   ++ V+E + +  + R   +NP+ +TY T+++    +G ++     F+ M   G
Sbjct: 265 AYAK---QEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           ++PD+  Y+ L        + EKAEEL + M++ G   + + F +II   C +G +  + 
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESG 381

Query: 444 EVFDKMCEHGVSPNLKTF 461
           ++FD M   GV P++ T 
Sbjct: 382 KLFDLMVRIGVKPDIITL 399



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 174/332 (52%), Gaps = 9/332 (2%)

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG-NVKPNLRTYN 217
           E+A   F ++   G+ P   +YN L+ G     + +E+++LL +M+ +G +  P++ +Y+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++  +  E +       + KM    + P+VVTYN+I  A  +    D+A EV+  M  +
Sbjct: 93  TVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           GV P+  T   I+ G+C  G+ KEA+ F + M+  GV P++V +N L+    +       
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            ++   M +  + PD+ TY T++  ++T G + +   + D M + GI P+ + +SIL   
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           Y ++++ E+A  +   M + G +PN V + T+I   C  G ++ A+  F++M + G+ P+
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
              + +L+       +  +AEE+   M   G+
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEMLDRGI 357



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 83/359 (23%), Positives = 173/359 (48%), Gaps = 10/359 (2%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESG--LTPTTSTYNTLIKGYGIAGKPEESV 197
           PD   +N ++N   +    +EA++    M + G    P   +Y+T+I G+   G  +   
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLD--- 105

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+LD       + PN+ TYN ++ A C  + + +A  V+  M  SG+ PD +TYN+I   
Sbjct: 106 KMLD-----QRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 160

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           +  +G+  +A   + +M  +GV+P+  T   ++   CK G+  EA +   +M + G+ P+
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPD 220

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  +  L++G+        +  +L LM    ++P+   +S ++ A++    +++   +F 
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 280

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + G+ P+A  Y  +     +    E A      MI+ G  P+ +++ ++I   C   
Sbjct: 281 KMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFD 340

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             ++A E+F +M + G+  +   F +++  + +  +   + ++  +M   GV P   T 
Sbjct: 341 KWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITL 399



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 132/260 (50%), Gaps = 10/260 (3%)

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG--VHPNLVIFN 322
           + A  V  E+   G+ P+  +  I+++G C E + +EAL     M + G    P++V ++
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            +I GF +  D D        M + R++P+V+TY++I+ A   A  +DK  E+   M K+
Sbjct: 93  TVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ PD   Y+ +  G+    +P++A   L  M   G  P+VV + +++   C +G    A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            ++FD M + G+ P++ T+ TL+ GY+          +L +M   G+HP    F +L  A
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 503 RRATGLTKEAKRILSKIKNK 522
                  +EA  + SK++ +
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQ 285



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 119/248 (47%), Gaps = 36/248 (14%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM+ L + G+  EA+ IF+++ + G KP + TY TLL     +     +H ++ 
Sbjct: 186 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLD 245

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  NG+ P+   F+ ++ A+++   +EEAM  F KM++ GL P   TY T+I     +G
Sbjct: 246 LMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSG 305

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E+++   + M  EG ++P+   YN L+ + C    I + W                  
Sbjct: 306 RVEDAMLYFEQMIDEG-LRPDSIVYNSLIHSLC----IFDKW------------------ 342

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
                        ++AEE+ +EM   G+  +      II  +CKEG++ E+ +    M  
Sbjct: 343 -------------EKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVR 389

Query: 312 YGVHPNLV 319
            GV P+++
Sbjct: 390 IGVKPDII 397


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 185/379 (48%), Gaps = 13/379 (3%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEEN-GMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           TY  L+ A  +     +   ++ ++E+  GM P    +N  ++A  +SG + EAM+    
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           MK+    P   T+NTLI G   AG+ +E+ ++LD M R G    NL TYN L+    +  
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSG-FAANLVTYNTLINGLSSAG 138

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN-GVQPNGRTC 286
              EA  VM  M  +   PD  TYN I   + ++GE D+A   + EM+   G  P+  T 
Sbjct: 139 RSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTY 195

Query: 287 GIIISGYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
            I+I+G CK   +++A    + M        ++V FN L+ G+ +  D D   E+L+ M 
Sbjct: 196 SILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSML 255

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           E    PDV+TYSTI++     G +DK   + + M   G KPD   Y++L  G  +  +  
Sbjct: 256 EHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMV 315

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +A  L+  M+E G  PN V ++ +  G C    +D A ++   + + G   ++  FE L+
Sbjct: 316 EACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL 375

Query: 466 WGYSE------ARQPWRAE 478
               +      A Q W+ E
Sbjct: 376 LSVKKRLLDRAAFQKWKLE 394



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 185/374 (49%), Gaps = 11/374 (2%)

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           TY  L++ + +AG+ + ++ LL  M ++  + P    YN  V A C    + EA  V+  
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M     KPDVVT+NT+     + G  D+A++V+ EME +G   N  T   +I+G    G+
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR----VNPDVI 354
             EA+   + M      P+   +N +I GF +  +   +D     ++E +     +PD  
Sbjct: 140 SGEAVLVMQGMT---TTPDTQTYNAIIHGFCKSGE---IDRAYGFLEEMKQRAGCSPDTF 193

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDM-GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           TYS ++N    +  + K  E+  +M G+        A++ L  GY + Q+ ++A ELL +
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M+E G  P+VV ++TII G C  G +D+   + +KM   G  P++ T+  L+ G  +A +
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEED 533
              A  +++ M   G  P   T+ L+ +          A  +L+ I++K R  ++ A E 
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEA 373

Query: 534 IPVESLERLYHKEA 547
           + +   +RL  + A
Sbjct: 374 LLLSVKKRLLDRAA 387



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 148/319 (46%), Gaps = 39/319 (12%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            +++L + GK  EA  +  N+ +G  KP +VT+ TL+A L    R +    ++ ++E +G
Sbjct: 60  FVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSG 119

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              + + +N +IN  S +G   EA+     M     TP T TYN +I G+  +G+ + + 
Sbjct: 120 FAANLVTYNTLINGLSSAGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAY 176

Query: 198 KLLDLMSREGNVKPNLRTY------------------------------------NVLVR 221
             L+ M +     P+  TY                                    N LV 
Sbjct: 177 GFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVD 236

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
            +C  +++  A  ++  M   G  PDVVTY+TI     + G+ D+   ++ +M   G +P
Sbjct: 237 GYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKP 296

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  T  ++++G CK GK+ EA R  + M E G  PN V ++L+  G  +I   D  +++L
Sbjct: 297 DVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLL 356

Query: 342 ALMKEFRVNPDVITYSTIM 360
             +++     DV+ +  ++
Sbjct: 357 TSIRDKGRITDVVAFEALL 375



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/331 (25%), Positives = 153/331 (46%), Gaps = 6/331 (1%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G  P+   Y   + AL    +      ++  +++    PD + FN +I    ++G ++EA
Sbjct: 49  GMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEA 108

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
                +M+ SG      TYNTLI G   AG+  E+V ++  M+      P+ +TYN ++ 
Sbjct: 109 QQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMT----TTPDTQTYNAIIH 164

Query: 222 AWCNEKNITEAWNVMHKMAA-SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM-EHNGV 279
            +C    I  A+  + +M   +G  PD  TY+ +     ++    +A+E++ EM      
Sbjct: 165 GFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDC 224

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
             +      ++ GYCK   +  A     +M E+G  P++V ++ +I G     D D    
Sbjct: 225 CASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFA 284

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +L  M      PDV+TY+ ++     AG M +   +   M + G  P+A  YS++  G  
Sbjct: 285 LLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLC 344

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  + + A +LL ++ + G   +VV F  ++
Sbjct: 345 KIDKLDMANDLLTSIRDKGRITDVVAFEALL 375


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 194/382 (50%), Gaps = 10/382 (2%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           +EA+ +   +I     P+ VT+ T + A       +    ++ Q+ + G  PD + ++ +
Sbjct: 236 EEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTL 295

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           +N FSE G +++A+     M      P T  YN  +KG  IAG+ +E  +L+  M R+ +
Sbjct: 296 VNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMVRK-D 351

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
             PN  T++ L+ + C  +    A  V+ +M   G  PDVV+YNTI + +++   AD A 
Sbjct: 352 CPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDAL 411

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           +++  M     +P+  +   ++   C+  +  +A      M +   H N + FN+LI   
Sbjct: 412 KLLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSL 468

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +        E+  LM ++R  PD++TYS+++N +S  G +DK    FD       + D 
Sbjct: 469 CQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQG-LDKVA--FDLFRSMPCRADI 525

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
            +Y+   KG       + A EL+  M+     PN V F  +I+  C  G ++RAIEV+++
Sbjct: 526 FSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQ 585

Query: 449 MCEHGVSPNLKTFETLMWGYSE 470
           M ++G++P++ T+  L+ GYSE
Sbjct: 586 MPKYGITPDIFTYNALINGYSE 607



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 190/401 (47%), Gaps = 47/401 (11%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P+++T   L+  L  ++R      ++  ++ +G   D++  N ++  +   G++ +A   
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSGA-ADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
               + SG      TY  LI GY  +G+  ++++L+  M     V P+  TYN +++  C
Sbjct: 176 LEAARASG-AANVVTYTALIDGYCRSGRLTDALRLIASMP----VAPDTYTYNTVLKGLC 230

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
             K   EA  +M +M  +   P+ VT+ T   A+ QNG  D+A E++ +M   G  P+  
Sbjct: 231 FAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVV 290

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV-------------EI 331
               +++G+ + G++ +AL+   TM      PN V +N  +KG               E+
Sbjct: 291 IYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEM 347

Query: 332 MDRDG----------------------VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           + +D                         EVL  M+++   PDV++Y+TI++ +S     
Sbjct: 348 VRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACA 407

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D   ++ + M     KPD  +++ + K   R +    A EL+  M++   H N + F  +
Sbjct: 408 DDALKLLNSM---LCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNIL 464

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           I   C +G +  AIE+F+ M ++  +P++ T+ +L+ G+SE
Sbjct: 465 IDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSE 505



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 147/315 (46%), Gaps = 8/315 (2%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P + T N+L++  C  + + +A  V+  +  SG   D V++NT+   Y ++G    AE V
Sbjct: 117 PAVITCNILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCRDGSLWDAERV 175

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +     +G   N  T   +I GYC+ G++ +ALR   +M    V P+   +N ++KG   
Sbjct: 176 LEAARASGAA-NVVTYTALIDGYCRSGRLTDALRLIASMP---VAPDTYTYNTVLKGLCF 231

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
               +  +E++  M     +P+ +T++T + A+   G +D+  E+ + M K G  PD   
Sbjct: 232 AKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVI 291

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YS L  G+      + A +LL TM+     PN V +   + G C  G  D   E+  +M 
Sbjct: 292 YSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEMV 348

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
                PN  TF TL+    + R    A E+L+ M+ +G  P   ++  +           
Sbjct: 349 RKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACAD 408

Query: 511 EAKRILSKIKNKERT 525
           +A ++L+ +  K  T
Sbjct: 409 DALKLLNSMLCKPDT 423



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/353 (21%), Positives = 152/353 (43%), Gaps = 45/353 (12%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L+NSL +    + A  +   + + G+ P +V+Y T+++  + Q   +    +++ +
Sbjct: 358 TFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALKLLNSM 417

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
                 PD+I FNAV+     +    +A +   KM +        T+N LI      G+ 
Sbjct: 418 L---CKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNGQV 474

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++++++ +LM +     P++ TY+ L+  +  +     A+++   M     + D+ +YN 
Sbjct: 475 KDAIEMFELMPKY-RCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPC---RADIFSYNA 530

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
                      D A E+I +M      PN  T  I+I+  C++G +  A+     M +YG
Sbjct: 531 TLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKYG 590

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P++  +N LI G+ E   +  +D+ L  +      PD I+Y++I+             
Sbjct: 591 ITPDIFTYNALINGYSE---QGCLDDALKFLSTMPCEPDTISYNSIL------------- 634

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
                                 KG  R +  + AE+L+  M+     PN V F
Sbjct: 635 ----------------------KGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665



 Score = 89.7 bits (221), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 62/290 (21%), Positives = 127/290 (43%), Gaps = 37/290 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   +++   E+    +A  + N+++    KP  +++  +L  L   +R+     +M+
Sbjct: 391 VVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAERWYDAAELMA 447

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +     + + FN +I++  ++G +++A++ F  M +   TP   TY++LI G+   G
Sbjct: 448 KMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQG 507

Query: 192 KPEESVKLL-------DLMSREGNVK------------------------PNLRTYNVLV 220
             + +  L        D+ S    +K                        PN  T+N+L+
Sbjct: 508 LDKVAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILI 567

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
            + C +  +  A  V  +M   G+ PD+ TYN +   Y++ G  D A + +  M     +
Sbjct: 568 NSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMP---CE 624

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           P+  +   I+ G C+  + K+A +    M      PN V F    + F++
Sbjct: 625 PDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFKYANQLFIK 674



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 74/149 (49%), Gaps = 5/149 (3%)

Query: 69  CRT-VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           CR  + S    +  L    +  +A  +  +++     P+ VT+  L+ +L  +   N   
Sbjct: 521 CRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAI 580

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            +  Q+ + G+ PD   +NA+IN +SE G +++A+     M      P T +YN+++KG 
Sbjct: 581 EVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMP---CEPDTISYNSILKGL 637

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTY 216
             A + +++ KL+  M R+ N  PN  T+
Sbjct: 638 CRAERWKDAEKLVTEMLRK-NCTPNEVTF 665


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 210/404 (51%), Gaps = 1/404 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  EA    ++++  G   + VTY  L+  L    +  +   ++ Q+E   ++ + + +
Sbjct: 137 GKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQTRAALQVLRQIEGKLVNTNVVMY 196

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           + +I+   +   + +A   + +M    + PT  T+++LI G+ I GK +++ +L + M  
Sbjct: 197 STIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVM 256

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           + N+ P+  T+N+LV A C E  I EA NV+  M   G++P VVTYNT+   Y    E  
Sbjct: 257 K-NINPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVG 315

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A+ V+  +    V PN R+  I+I+G+CK   + EAL     M   G+ P+ V +N LI
Sbjct: 316 KAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLI 375

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G  +        E++  M    +  D++TY+++++ +     +DK   +   + + GI+
Sbjct: 376 DGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQ 435

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P+   Y+IL  G  +  + + A+++   ++  G++ N   +  +I+G C +G  D A  +
Sbjct: 436 PNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVL 495

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             KM ++G+ P+  T+ET++       +  +A+++L+ M   GV
Sbjct: 496 LSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGV 539



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 223/475 (46%), Gaps = 29/475 (6%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQK-RFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           FN + +    PS+V +  +L  L   K  + ++ S+ +Q+E  G+ PD    + +IN + 
Sbjct: 54  FNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYC 113

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTS---------------------TYNTLIKGYGIAGK 192
             G M  A   F K+ + GL                          TY  LI G    G+
Sbjct: 114 HLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLCKMGQ 173

Query: 193 PEESVKLLDLMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              ++++L  +  EG  V  N+  Y+ ++   C +K +T+A+ +  +M    + P VVT+
Sbjct: 174 TRAALQVLRQI--EGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTF 231

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +++   +   G+   A  +  EM    + P+  T  I++   CKEGKIKEA      M +
Sbjct: 232 SSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMMK 291

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P +V +N L+ G+  + +      VL+++   RV P+  +Y+ ++N +     +D+
Sbjct: 292 EGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVDE 351

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F +M   GI P    Y+ L  G  +      A EL+  M  +    ++V + ++I 
Sbjct: 352 ALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLID 411

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            +C +  +D+AI +  K+ EHG+ PN+ T+  L+ G  +  Q   A+++ Q +   G + 
Sbjct: 412 VFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNV 471

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKE 546
              T+ ++       GL  EA+ +LSK+++     +    E I    ++ L+HK+
Sbjct: 472 NAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETI----IQALFHKD 522



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 107/208 (51%), Gaps = 3/208 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           RS   ++N   +     EA  +F+ +   G  P  VTY +L+  L    R      ++ +
Sbjct: 334 RSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDE 393

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +  N +  D + +N++I+ F ++ ++++A+    K+KE G+ P   TYN LI G    G+
Sbjct: 394 MHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQ 453

Query: 193 PEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
            + +  +  DL+ +  NV  N  TYN+++   C E    EA  ++ KM  +G+ PD VTY
Sbjct: 454 LKNAQDVFQDLLIKGYNV--NAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTY 511

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGV 279
            TI  A     E ++A++++ EM   GV
Sbjct: 512 ETIIQALFHKDENEKAQKLLREMVIKGV 539



 Score = 49.7 bits (117), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 59/120 (49%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A A+   + E G +P++ TY  L+  L    +  +   +   +   G + ++  +N +I
Sbjct: 421 KAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMI 480

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N   + G  +EA     KM+++G+ P   TY T+I+      + E++ KLL  M  +G V
Sbjct: 481 NGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKGVV 540


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 205/398 (51%), Gaps = 12/398 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++   +++ L   G+  EA  + + ++  G     +TY  L+  L    + +   ++++
Sbjct: 275 VQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALLN 334

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK-MKESGLTPTTSTYNTLIKGYGIA 190
           ++     +P+++ +N +I+ +  SG  EEA D  +  M  +G  P   T+N +I G    
Sbjct: 335 KIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKK 390

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    +++LL+ M  +   +PN+ TY +L+  +C +  + EA  +++ M+A G+  + V 
Sbjct: 391 GYLVSALELLNEMVAK-RFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVG 449

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +  A  ++G  ++A ++  EM   G +P+  T   +I+G CK  K++EAL     M 
Sbjct: 450 YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMF 509

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE--FRVNP-DVITYSTIMNAWSTAG 367
             GV  N V +N L+  F+    RD + +   L+ E  FR  P D ITY+ ++ A    G
Sbjct: 510 LEGVIANTVTYNTLVHAFLM---RDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTG 566

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            ++K   +F++M   GI P   + +IL  G  R  +   A + L  MI  G  P++V + 
Sbjct: 567 AVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYN 626

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           ++I+G C  G +  A  +F+K+   G+ P+  T+ TL+
Sbjct: 627 SLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLI 664



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/361 (27%), Positives = 178/361 (49%), Gaps = 6/361 (1%)

Query: 76  TKLMNSLIE----RGKPQEAQ-AIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T L N+LI      G+ +EA+  ++NN++  G++P   T+  ++  L  +    S   ++
Sbjct: 341 TVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELL 400

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++     +P+ I +  +IN F + G +EEA +    M   GL+  T  YN LI      
Sbjct: 401 NEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKD 460

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  EE+++L   MS +G  KP++ T+N L+   C    + EA ++ H M   G+  + VT
Sbjct: 461 GNIEEALQLFGEMSGKG-CKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVT 519

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+  A+       QA +++ EM   G   +  T   +I   CK G +++ L     M 
Sbjct: 520 YNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEML 579

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P ++  N+LI G       +   + L  M    + PD++TY++++N     G + 
Sbjct: 580 GKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQ 639

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +F+ +   GI+PDA  Y+ L   +  E     A  LL   ++SGF PN V ++ +I
Sbjct: 640 EASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILI 699

Query: 431 S 431
           +
Sbjct: 700 N 700



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 110/476 (23%), Positives = 215/476 (45%), Gaps = 25/476 (5%)

Query: 61  SFCMNKE---SCRTVRSMTK------------LMNSLIERGKPQEAQAIFNNLIEGGHKP 105
           + CM  E   +C  +R M K            L+++L E  +  EA  +  ++     +P
Sbjct: 214 ALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEP 273

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
            + T+  ++  L    R +    ++ ++   G   D++ +  +++     G ++EA    
Sbjct: 274 DVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEARALL 333

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
            K+      P T  YNTLI GY  +G+ EE+  LL         +P+  T+N+++     
Sbjct: 334 NKIP----NPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVK 389

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
           +  +  A  ++++M A   +P+V+TY  +   + + G  ++A E++  M   G+  N   
Sbjct: 390 KGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVG 449

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
              +I   CK+G I+EAL+    M   G  P++  FN LI G  +      ++E L+L  
Sbjct: 450 YNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCK---NHKMEEALSLYH 506

Query: 346 EFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
           +     V  + +TY+T+++A+     + +  ++ D+M   G   D   Y+ L K   +  
Sbjct: 507 DMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTG 566

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             EK   L   M+  G  P ++    +ISG C  G ++ A++    M   G++P++ T+ 
Sbjct: 567 AVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDIVTYN 626

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
           +L+ G  +      A  +   +++ G+ P   T+  L       G+  +A  +L K
Sbjct: 627 SLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMFNDACLLLYK 682



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/459 (23%), Positives = 216/459 (47%), Gaps = 6/459 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T +S   +++ L++   P+ A  +F +++  G  P++ T+  ++ AL +    +S  S++
Sbjct: 169 TFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACSLL 228

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + ++G  P+S+ +  +I+A  E+  + EA+     M      P   T+N +I G   A
Sbjct: 229 RDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRA 288

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+  E+ KLLD M   G    +  TY  L+   C    + EA  +++K+      P+ V 
Sbjct: 289 GRIHEAAKLLDRMLLRG-FSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVL 343

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           YNT+ + Y  +G  ++A++++   M   G +P+  T  I+I G  K+G +  AL     M
Sbjct: 344 YNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEM 403

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
                 PN++ + +LI GF +    +   E++  M    ++ + + Y+ ++ A    G +
Sbjct: 404 VAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNI 463

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           ++  ++F +M   G KPD + ++ L  G  +  + E+A  L   M   G   N V + T+
Sbjct: 464 EEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTL 523

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           +  +    S+ +A ++ D+M   G   +  T+  L+    +     +   + + M   G+
Sbjct: 524 VHAFLMRDSIQQAFKLVDEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGI 583

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEM 528
            P   +  +L      TG   +A + L  + ++  T ++
Sbjct: 584 FPTIISCNILISGLCRTGKVNDALKFLQDMIHRGLTPDI 622



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 194/405 (47%), Gaps = 21/405 (5%)

Query: 1   MGKFAEGKAFLQTDDKYQSGSTIVKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHC 60
           MG+  E +A L   +K  + +T++         A       K  LY+N      +P  + 
Sbjct: 323 MGQVDEARALL---NKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAY- 378

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
                        +   +++ L+++G    A  + N ++    +P+++TYT L+     Q
Sbjct: 379 -------------TFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQ 425

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
            R      I++ +   G+  +++ +N +I A  + GN+EEA+  F +M   G  P   T+
Sbjct: 426 GRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTF 485

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           N+LI G     K EE++ L   M  EG V  N  TYN LV A+    +I +A+ ++ +M 
Sbjct: 486 NSLINGLCKNHKMEEALSLYHDMFLEG-VIANTVTYNTLVHAFLMRDSIQQAFKLVDEML 544

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
             G   D +TYN +  A  + G  ++   +  EM   G+ P   +C I+ISG C+ GK+ 
Sbjct: 545 FRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVN 604

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           +AL+F + M   G+ P++V +N LI G  ++        +   ++   + PD ITY+T++
Sbjct: 605 DALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLI 664

Query: 361 NAWSTAG-FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
           +     G F D C  ++  +  +G  P+   +SIL   Y+ ++ P
Sbjct: 665 SRHCHEGMFNDACLLLYKGV-DSGFIPNEVTWSILIN-YIVKKIP 707



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 92/382 (24%), Positives = 180/382 (47%), Gaps = 6/382 (1%)

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           DP    +N V++   +      A + F+ M   G++PT  T+  ++K   +  + + +  
Sbjct: 167 DPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDSACS 226

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           LL  M++ G V PN   Y  L+ A C    ++EA  ++  M     +PDV T+N +    
Sbjct: 227 LLRDMAKHGCV-PNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGL 285

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
            + G   +A +++  M   G   +  T G ++ G C+ G++ E    AR +     +PN 
Sbjct: 286 CRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDE----ARALLNKIPNPNT 341

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLA-LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           V++N LI G+V     +   ++L   M      PD  T++ +++     G++    E+ +
Sbjct: 342 VLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLN 401

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M     +P+   Y+IL  G+ ++   E+A E++ +M   G   N V +  +I   C DG
Sbjct: 402 EMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDG 461

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
           +++ A+++F +M   G  P++ TF +L+ G  +  +   A  +   M   GV     T+ 
Sbjct: 462 NIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYN 521

Query: 498 LLAEARRATGLTKEAKRILSKI 519
            L  A       ++A +++ ++
Sbjct: 522 TLVHAFLMRDSIQQAFKLVDEM 543



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 179/387 (46%), Gaps = 44/387 (11%)

Query: 148 VINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL------- 200
           +I+     G+ +       +MK+ GL    S +  ++K YG AG P ++ +LL       
Sbjct: 105 LIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGVY 164

Query: 201 ------------------------------DLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
                                         D++SR   V P + T+ V+++A C    + 
Sbjct: 165 SCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSR--GVSPTVYTFGVVMKALCMVSEVD 222

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
            A +++  MA  G  P+ V Y T+  A  +N    +A +++ +M     +P+ +T   +I
Sbjct: 223 SACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVI 282

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
            G C+ G+I EA +    M   G   + + +  L+ G   +     VDE  AL+ +   N
Sbjct: 283 HGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRM---GQVDEARALLNKIP-N 338

Query: 351 PDVITYSTIMNAWSTAGFMDKCKE-IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
           P+ + Y+T+++ +  +G  ++ K+ ++++M  AG +PDA+ ++I+  G V++     A E
Sbjct: 339 PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALE 398

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           LL  M+   F PNV+ +T +I+G+C  G ++ A E+ + M   G+S N   +  L+    
Sbjct: 399 LLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALC 458

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTF 496
           +      A ++   M   G  P   TF
Sbjct: 459 KDGNIEEALQLFGEMSGKGCKPDIYTF 485



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/198 (22%), Positives = 79/198 (39%), Gaps = 1/198 (0%)

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM-GK 381
           LLI     + D   ++++L  MK+  +      +  IM  +  AG   +   +  DM G 
Sbjct: 104 LLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLPGQATRLLLDMWGV 163

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
               P   +Y+++    V    P  A  +   M+  G  P V  F  ++   C    +D 
Sbjct: 164 YSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGVVMKALCMVSEVDS 223

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A  +   M +HG  PN   ++TL+    E  +   A ++L+ M      P   TF  +  
Sbjct: 224 ACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIH 283

Query: 502 ARRATGLTKEAKRILSKI 519
                G   EA ++L ++
Sbjct: 284 GLCRAGRIHEAAKLLDRM 301


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 214/452 (47%), Gaps = 43/452 (9%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T +M  L    +  EA A+  ++   G +  +VTY TL+  L      +    ++ ++
Sbjct: 117 SYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEM 176

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G+ P+ I ++ ++  +  SG  ++    F +M   G+ P    +   I      G+ 
Sbjct: 177 CGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRI 236

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++VK+ D+M + G ++PN+ TYNVL+   C E ++ EA  + ++M   G+ PDVVTYNT
Sbjct: 237 GKAVKVKDIMVQRG-LEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNT 295

Query: 254 IATAYAQNGEADQAEEVIVEMEHNG--VQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +    +   E D A  ++ EM      V+P+  T   +I G CK G++++A+     M E
Sbjct: 296 LIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAE 355

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGF 368
            G   NLV +N LI GF+ +     V+  + LM E     + PD  TYS ++N +S    
Sbjct: 356 RGCMCNLVTYNYLIGGFLRV---HKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWE 412

Query: 369 MDKCKEIFDDMGKAGIKP----------------------------------DAHAYSIL 394
           +D+ +     M + GI+                                   DA AYS +
Sbjct: 413 VDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCGLDAVAYSTM 472

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G  +  + + A++LL  M++ G  P+ V ++ +I+ +   G ++ A  V  +M   G 
Sbjct: 473 MYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGF 532

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            P++  F++L+ GYS   Q  +  +++  M+A
Sbjct: 533 VPDVAVFDSLIKGYSAEGQINKILDLIHEMRA 564



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/504 (24%), Positives = 234/504 (46%), Gaps = 57/504 (11%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGG----------HKPSL---VTYTTLLAA 116
           + VR     +  L+ RG+  +A A+ N  +               P +   V+Y  +LAA
Sbjct: 27  KPVRPAAPFLAVLLRRGRA-DAAALLNRRLRAAPVTEACSLLSALPDVRDAVSYNIVLAA 85

Query: 117 LTIQ----KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG 172
           L  +    ++  S+ + MS+       P+++ +  V+     S   +EA+     M+ SG
Sbjct: 86  LCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASG 145

Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA 232
           +     TY TLI+G   A + + +++LL  M   G V PN+  Y+ L+R +C      + 
Sbjct: 146 VRADVVTYGTLIRGLCDAAELDGALELLGEMCGSG-VHPNVIVYSCLLRGYCRSGRWQDV 204

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
             V  +M+  G++PDV+ +        + G   +A +V   M   G++PN  T  ++I+ 
Sbjct: 205 SKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINC 264

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM--KEFRVN 350
            CKEG ++EAL     M + GV P++V +N LI G   +++ DG   +L  M   +  V 
Sbjct: 265 LCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVE 324

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGK----------------------------- 381
           PDV+T++++++     G M +   + + M +                             
Sbjct: 325 PDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNL 384

Query: 382 ------AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
                 +G++PD+  YSIL  G+ +  E ++AE  L TM + G    +  +  +++  C 
Sbjct: 385 MSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQ 444

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G M++A+ +F++M +     +   + T+M+G  ++     A+++LQ M   G+ P   T
Sbjct: 445 LGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVT 503

Query: 496 FLLLAEARRATGLTKEAKRILSKI 519
           + +L       G  +EA+R+L ++
Sbjct: 504 YSILINMFAKLGDLEEAERVLKQM 527



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/391 (25%), Positives = 202/391 (51%), Gaps = 6/391 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+      G+ Q+   +F  +   G +P ++ +T  +  L  + R      +   + + G
Sbjct: 191 LLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRG 250

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++P+ + +N +IN   + G++ EA+    +M + G+ P   TYNTLI G     + + ++
Sbjct: 251 LEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAM 310

Query: 198 KLLD-LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            LL+ ++  +  V+P++ T+N ++   C    + +A +V   MA  G   ++VTYN +  
Sbjct: 311 GLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIG 370

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            + +  + + A  ++ E+  +G++P+  T  I+I+G+ K  ++  A  F RTM + G+  
Sbjct: 371 GFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRA 430

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP--DVITYSTIMNAWSTAGFMDKCKE 374
            L  +  L+    ++     +++ + L  E  +N   D + YST+M     +G +   K+
Sbjct: 431 ELFHYIPLLAALCQL---GMMEQAMVLFNEMDMNCGLDAVAYSTMMYGACKSGDIKAAKQ 487

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +  DM   G+ PDA  YSIL   + +  + E+AE +L  M  SGF P+V +F ++I G+ 
Sbjct: 488 LLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYS 547

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           ++G +++ +++  +M    V+ + K   TL+
Sbjct: 548 AEGQINKILDLIHEMRAKNVAIDPKFICTLV 578



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 61/250 (24%), Positives = 120/250 (48%), Gaps = 4/250 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++ L + G+ ++A ++   + E G   +LVTY  L+       + N   ++MS
Sbjct: 327 VVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMS 386

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G++PDS  ++ +IN FS+   ++ A      M + G+      Y  L+      G
Sbjct: 387 ELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLG 446

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E+++ L + M  + N   +   Y+ ++   C   +I  A  ++  M   G+ PD VTY
Sbjct: 447 MMEQAMVLFNEM--DMNCGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTY 504

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM-- 309
           + +   +A+ G+ ++AE V+ +M  +G  P+      +I GY  EG+I + L     M  
Sbjct: 505 SILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRA 564

Query: 310 KEYGVHPNLV 319
           K   + P  +
Sbjct: 565 KNVAIDPKFI 574



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 43/172 (25%), Positives = 83/172 (48%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P+ ++Y+ +M     +   D+   +   M  +G++ D   Y  L +G     E + A EL
Sbjct: 113 PNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALEL 172

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           L  M  SG HPNV++++ ++ G+C  G      +VF++M   GV P++  F   +    +
Sbjct: 173 LGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCK 232

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             +  +A ++  IM   G+ P   T+ +L       G  +EA  + +++ +K
Sbjct: 233 KGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDK 284



 Score = 44.7 bits (104), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 21/110 (19%), Positives = 49/110 (44%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +M    + G  + A+ +  ++++ G  P  VTY+ L+              ++ Q+  
Sbjct: 470 STMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAA 529

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
           +G  PD   F+++I  +S  G + + +D   +M+   +        TL++
Sbjct: 530 SGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAIDPKFICTLVR 579


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 103/375 (27%), Positives = 193/375 (51%), Gaps = 4/375 (1%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T ++  L +  K   A + F  +++ G  P  VTYT L+ +L    ++   H I  ++  
Sbjct: 126 TVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLS 185

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P+ + +  V+N + ++G +++A+    ++K +G +P+ S Y+TLI G     + +E
Sbjct: 186 KGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDE 245

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +L ++ +  G+V+ ++  Y   +   C    + EA  V  KM  +G  PD V+YN I 
Sbjct: 246 ARELFEMAA--GDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVII 302

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            +  ++    +A+E++ +       P    C +++ G CK  +++EA      M E G  
Sbjct: 303 YSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDR 362

Query: 316 -PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            P++V ++ +I G  +    D    VL  M+     PDV+TY+ I++A+   G +D+ +E
Sbjct: 363 APSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARE 422

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +F  M + G   D  AY+IL +GY R  + ++A  ++  M   G  PNVV  +TI+ G C
Sbjct: 423 LFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLC 482

Query: 435 SDGSMDRAIEVFDKM 449
            +  ++ A  + +KM
Sbjct: 483 KESRVEEARLLMEKM 497



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/384 (25%), Positives = 187/384 (48%), Gaps = 4/384 (1%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD   +  +I  F ++  + +A++   +MK +G+TPT  T+ +LI+        ++++++
Sbjct: 50  PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQI 109

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
              M  +  VKP+   Y V++   C    +  A +   +M  SG  PD VTY  +  +  
Sbjct: 110 FHQMI-DMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLF 168

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +  + +Q  ++  EM   G  P   T   +++GYCK G+I +AL   R +K  G  P+  
Sbjct: 169 KACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGS 228

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           +++ LI G  +  DR      L  M    V  DVI Y++ ++    AG +D+ K +   M
Sbjct: 229 LYSTLIDGLCK-HDRHDEARELFEMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKM 286

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            +AG  PD  +Y+++     ++    +A+EL+   +E    P V + T ++ G C    +
Sbjct: 287 IEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRV 346

Query: 440 DRAIEVFDKMCEHG-VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           + A  + ++M E G  +P++ T+  ++ G  +A +   A  +LQ M+  G  P   T+  
Sbjct: 347 EEACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTA 406

Query: 499 LAEARRATGLTKEAKRILSKIKNK 522
           + +A    G   EA+ +  ++  +
Sbjct: 407 IIDAFCKVGRLDEARELFQRMHER 430



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/431 (24%), Positives = 194/431 (45%), Gaps = 4/431 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A  +   +   G  P++VT+ +L+  L      +    I  Q+ +  + PD+  +  VI
Sbjct: 70  QAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVI 129

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
               +   ++ A   F +M +SG  P   TY  L+     A K E+  ++ + M  +G+ 
Sbjct: 130 GHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGH- 188

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            P L TY  +V  +C    I +A ++M ++  +G  P    Y+T+     ++   D+A E
Sbjct: 189 SPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARE 248

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
            + EM    VQ +       ISG CK GK+ EA      M E G  P+ V +N++I    
Sbjct: 249 -LFEMAAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLC 306

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK-PDA 388
           +        E++    E +  P V   + +++    +  +++   I + M + G + P  
Sbjct: 307 KDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSV 366

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             YS +  G  +    + A  +L  M  +G  P+VV +T II  +C  G +D A E+F +
Sbjct: 367 VTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQR 426

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M E G + ++  +  L+ GY  A +   A  +++ M   G+ P   +   + +       
Sbjct: 427 MHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESR 486

Query: 509 TKEAKRILSKI 519
            +EA+ ++ K+
Sbjct: 487 VEEARLLMEKM 497



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 75/318 (23%), Positives = 155/318 (48%), Gaps = 7/318 (2%)

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL--DLMSREGNVKPNLRTYNVLVRAW 223
           W     G    T T N+L++ +   G   E+ ++   +L++     +P+  TY  L+R +
Sbjct: 6   WAKARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTL---FRPDDFTYGTLIRGF 62

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C  + I +A N++ +M A+G+ P +VT+ ++     +    D+A ++  +M    V+P+ 
Sbjct: 63  CKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDA 122

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
               ++I   CK  K+  A  +   M + G  P+ V + +L+    +    +   ++   
Sbjct: 123 FLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEE 182

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M     +P+++TY+T++N +  AG +D+   +   +   G  P    YS L  G  +   
Sbjct: 183 MLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDR 242

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            ++A EL    + +G   +V+++T+ ISG C  G +D A  V  KM E G +P+  ++  
Sbjct: 243 HDEARELF--EMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNV 300

Query: 464 LMWGYSEARQPWRAEEIL 481
           +++   +  +   A+E++
Sbjct: 301 IIYSLCKDNRVSEAKELM 318



 Score =  125 bits (314), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 70/279 (25%), Positives = 132/279 (47%), Gaps = 7/279 (2%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L++ L +  +  EA+ +F   +  G    ++ YT+ ++ L    + +   ++  ++ E
Sbjct: 231 STLIDGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIE 288

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  PD + +N +I +  +   + EA +   +  E    P       L+ G   + + EE
Sbjct: 289 AGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEE 348

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  +L+ M   G+  P++ TY+ ++   C    + +A+ V+ KM  +G  PDVVTY  I 
Sbjct: 349 ACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAII 408

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            A+ + G  D+A E+   M   G   +     I+I GYC+  K+ EA+     M   G+ 
Sbjct: 409 DAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQ 468

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKE--FRVNPD 352
           PN+V  + ++ G  +      V+E   LM++  F   PD
Sbjct: 469 PNVVSLSTIVDGLCK---ESRVEEARLLMEKMNFESLPD 504



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/244 (23%), Positives = 116/244 (47%)

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
           A  G + +  T N++   +  +G   +A  V  +      +P+  T G +I G+CK  +I
Sbjct: 9   ARPGFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQI 68

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            +A+     MK  G+ P +V F  LI+   E+   D   ++   M + +V PD   Y+ +
Sbjct: 69  PQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVV 128

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +        +D     F+ M ++G  PD   Y++L     +  + E+  ++   M+  G 
Sbjct: 129 IGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGH 188

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            P +V + T+++G+C  G +D+A+ +  ++   G SP+   + TL+ G  +  +   A E
Sbjct: 189 SPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARE 248

Query: 480 ILQI 483
           + ++
Sbjct: 249 LFEM 252



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 102/219 (46%)

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G Q N  TC  ++  +  +G  +EA R  +        P+   +  LI+GF +       
Sbjct: 12  GFQHNTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQA 71

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
             +L  MK   + P ++T+ +++       F DK  +IF  M    +KPDA  Y+++   
Sbjct: 72  VNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGH 131

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             +  + + A      M++SG  P+ V +T ++         ++  ++F++M   G SP 
Sbjct: 132 LCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPE 191

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           L T+ T++ GY +A +  +A  +++ +K  G  P  S +
Sbjct: 192 LVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLY 230



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 83/188 (44%), Gaps = 5/188 (2%)

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           DE++ L +     PD  TY T++  +  A  + +   +  +M  AGI P    +  L + 
Sbjct: 42  DELVTLFR-----PDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRK 96

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
                  +KA ++   MI+    P+  ++T +I   C    +D A   F++M + G  P+
Sbjct: 97  LCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPD 156

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
             T+  L+    +A +  +  +I + M + G  P+  T+  +       G   +A  ++ 
Sbjct: 157 KVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMR 216

Query: 518 KIKNKERT 525
           ++K   R+
Sbjct: 217 RLKGTGRS 224



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/136 (20%), Positives = 65/136 (47%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + + +++ L +  +  +A  +   +   G  P +VTYT ++ A     R +    + 
Sbjct: 365 SVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELF 424

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ E G   D + +N +I  +  +  ++EA+    +M   G+ P   + +T++ G    
Sbjct: 425 QRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKE 484

Query: 191 GKPEESVKLLDLMSRE 206
            + EE+  L++ M+ E
Sbjct: 485 SRVEEARLLMEKMNFE 500



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/174 (20%), Positives = 77/174 (44%)

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           T ++++  +   G   +   +F D      +PD   Y  L +G+ + ++  +A  LL  M
Sbjct: 19  TCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEM 78

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
             +G  P +V F ++I   C     D+A+++F +M +  V P+   +  ++    +  + 
Sbjct: 79  KAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKL 138

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEM 528
             A    + M   G  P K T+ +L  +       ++  +I  ++ +K  + E+
Sbjct: 139 DLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPEL 192


>gi|218193284|gb|EEC75711.1| hypothetical protein OsI_12542 [Oryza sativa Indica Group]
          Length = 1031

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 220/458 (48%), Gaps = 12/458 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   +++S  +RG   EA ++++N++  G  P + TY +LL  L            M 
Sbjct: 529 VASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMV 588

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + E     D    N ++    + G ++EA+D   KM    + P T TY  L+ G+   G
Sbjct: 589 YLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRG 648

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVT 250
           K   ++ LL +M  +G V P+   Y  L+    NE  +  A  +  ++    G+  D + 
Sbjct: 649 KIVPALILLQMMLEKGLV-PDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIA 707

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++   Y + G+ ++ E ++  M  N V P+  +  I++ GY K+G++   L   R M 
Sbjct: 708 YNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMV 767

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA------LMKEFRVNPDVITYSTIMNAWS 364
           + G+ P+ V + LLI G  E     G+ E+        +++E  + P    Y  ++NA  
Sbjct: 768 KEGIKPDNVTYRLLIFGLCEY----GLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKC 823

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G +D   E+ +DM   G+ P   A S + +G  +  + E+A  +  +++ +G  P + 
Sbjct: 824 RVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIA 883

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            FTT++ G C +  +D A  +   M   G+  ++ T+  L+ G    +    A ++ + M
Sbjct: 884 TFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEM 943

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           K+ G+ P  +T++ L  A  ATG  ++ +++L  I+++
Sbjct: 944 KSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDR 981



 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 228/476 (47%), Gaps = 30/476 (6%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++NSL  +GK  +A+++   + +    P+ VTY T+L     + R  S   I+ 
Sbjct: 230 VTTCNIVLNSLCTQGKLSKAESMLQKM-KNCRLPNAVTYNTILNWYVKKGRCKSALRILD 288

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +E+NG++ D   +N +I+   +      A     +M+E  LTP   +YNTLI G+   G
Sbjct: 289 DMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEG 348

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM------------ 239
           K   ++ + + M R+ ++KP++ TY  L+  +C      EA  V+++M            
Sbjct: 349 KINLAIYIFNQMLRQ-SLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVSK 407

Query: 240 --------AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
                    A G+ PDV+TY+ +     + G   + +E++  M+ +GV PN      ++ 
Sbjct: 408 AKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVF 467

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV----DEVLALMKEF 347
            +CK G  KEAL++   +   G+  N VI N L+  F     R+G+    ++    M   
Sbjct: 468 YFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFY----REGMIAEAEQFKQYMSRM 523

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
           +++ DV +++ I++++   G + +   ++D+M + G  PD   Y  L +G  +     +A
Sbjct: 524 KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQA 583

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           +E ++ ++E     +     T++ G C  G++D A+++ +KM    + P+  T+  L+ G
Sbjct: 584 KEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDG 643

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           + +  +   A  +LQ+M   G+ P    +  L       G  K A  +  +I  KE
Sbjct: 644 FCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKE 699



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/449 (22%), Positives = 217/449 (48%), Gaps = 4/449 (0%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           +C N  +    R + ++  + +   +  +A+ I   ++  G  P ++TY+ L+  +    
Sbjct: 379 YCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINGMCKMG 438

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
             +    I+S+++++G+ P+++ +  ++  F ++G+ +EA+  F  +  SGL   +  +N
Sbjct: 439 MIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHN 498

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            L+  +   G   E+ +    MSR   +  ++ ++N ++ ++C   N+ EA++V   M  
Sbjct: 499 ALLCSFYREGMIAEAEQFKQYMSRM-KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVR 557

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G  PD+ TY ++     Q G   QA+E +V +       + +T   ++ G CK G + E
Sbjct: 558 HGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDE 617

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           AL     M    + P+   + +L+ GF +         +L +M E  + PD I Y+ ++N
Sbjct: 618 ALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQMMLEKGLVPDTIAYTCLLN 677

Query: 362 AWSTAGFMDKCKEIFDD-MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
                G +     +F + + K G+  D  AY+ +  GY++  +  + E L+  M E+  +
Sbjct: 678 GLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVY 737

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+   +  ++ G+   G + R + ++  M + G+ P+  T+  L++G  E      A + 
Sbjct: 738 PSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKF 797

Query: 481 LQ--IMKAFGVHPQKSTFLLLAEARRATG 507
           L+  +++  G+ P+ + ++ L  A+   G
Sbjct: 798 LEKMVLEESGLQPKHTHYIALINAKCRVG 826



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 206/470 (43%), Gaps = 54/470 (11%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S+  L+N+ ++ GK  +A A    + E G K SL +   +L AL    +   +   + + 
Sbjct: 162 SVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKES 221

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            +     D    N V+N+    G + +A     KMK   L P   TYNT++  Y   G+ 
Sbjct: 222 LDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRC 280

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + ++++LD M + G ++ +L TYN+++   C  K    A+ ++ +M    + PD  +YNT
Sbjct: 281 KSALRILDDMEKNG-IEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNT 339

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +   G+ + A  +  +M    ++P+  T   +I GYC+ G+  EA R    M+  G
Sbjct: 340 LIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITG 399

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V P  V      K  ++ M  DG+D            PDVITYS ++N     G + + K
Sbjct: 400 VRPREVSKA---KQILKCMLADGID------------PDVITYSALINGMCKMGMIHETK 444

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI-------- 425
           EI   M K+G+ P+   Y+ L   + +    ++A +  + +  SG   N VI        
Sbjct: 445 EILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSF 504

Query: 426 ---------------------------FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
                                      F  II  +C  G++  A  V+D M  HG  P++
Sbjct: 505 YREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDI 564

Query: 459 KTFETLMWGYSEARQPWRAEEILQIM--KAFGVHPQKSTFLLLAEARRAT 506
            T+ +L+ G  +     +A+E +  +  KA  +  +    LL+   +  T
Sbjct: 565 CTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGT 614



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/397 (22%), Positives = 176/397 (44%), Gaps = 4/397 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           +++  L+  + + G   EA  +   ++     P   TYT LL     + +      ++  
Sbjct: 600 KTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKIVPALILLQM 659

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK-ESGLTPTTSTYNTLIKGYGIAG 191
           + E G+ PD+I +  ++N     G ++ A   F ++  + GL      YN+++ GY   G
Sbjct: 660 MLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGG 719

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E  +L+  M  E  V P+  +YN+L+  +  +  ++    +   M   G+KPD VTY
Sbjct: 720 QINEIERLMRNM-HENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTY 778

Query: 252 NTIATAYAQNGEADQAEEVIVEM--EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
             +     + G  + A + + +M  E +G+QP       +I+  C+ G I  A      M
Sbjct: 779 RLLIFGLCEYGLIEIAVKFLEKMVLEESGLQPKHTHYIALINAKCRVGDIDGAFELKEDM 838

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           K  GV P+ V  + +++G  +    +    V + +    + P + T++T+M+       +
Sbjct: 839 KALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKI 898

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D    +   M   G+K D   Y++L  G   ++    A +L   M   G  PN+  + T+
Sbjct: 899 DDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITL 958

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
                + G+M    ++   + + G+ P+ K  E+L W
Sbjct: 959 TGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESLEW 995



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 88/410 (21%), Positives = 172/410 (41%), Gaps = 75/410 (18%)

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S V+++G+D  +  +   ++   ++    +AM     +  +G +  ++ +++L++     
Sbjct: 97  SIVQQSGLDRITHIYCMAVHILVQAQMPSQAMSVLRHLALTGFS-CSAIFSSLLR----- 150

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
                ++   D          NL + ++LV A+  E  + +A   +  M   G K  + +
Sbjct: 151 -----TISRCD--------PTNLFSVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFS 197

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            N I  A     +++     + E        +  TC I+++  C +GK+ +A        
Sbjct: 198 CNNILNALVGINKSEYVWLFLKESLDRKFPLDVTTCNIVLNSLCTQGKLSKA-------- 249

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                                      + +L  MK  R+ P+ +TY+TI+N +   G   
Sbjct: 250 ---------------------------ESMLQKMKNCRL-PNAVTYNTILNWYVKKGRCK 281

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               I DDM K GI+ D + Y+I+     + +   +A  LL  M E    P+   + T+I
Sbjct: 282 SALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLI 341

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS------EARQPW--------- 475
            G+  +G ++ AI +F++M    + P++ T+  L+ GY       EAR+           
Sbjct: 342 HGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVR 401

Query: 476 -----RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
                +A++IL+ M A G+ P   T+  L       G+  E K ILS+++
Sbjct: 402 PREVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQ 451


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 196/421 (46%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G KP + T+  L+ AL    +      ++  +   G+ PD   F  ++  + E G+++ A
Sbjct: 184 GIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGA 243

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           +    +M E G + +  + N ++ G+   G+ E+++  +  MS +    P+  T+N LV 
Sbjct: 244 LRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVN 303

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C   ++  A  +M  M   G  PDV TYN++ +   + GE  +A E + +M      P
Sbjct: 304 GLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSP 363

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N  T   +IS  CKE +++EA   AR +   G+ P++  FN LI+G     +     E+ 
Sbjct: 364 NTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELF 423

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M+     PD  TY+ ++++  + G +D+   +   M  +G       Y+ L  G+ + 
Sbjct: 424 EEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKA 483

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            +  +AEE+   M   G   N V + T+I G C    ++ A ++ D+M   G  P+  T+
Sbjct: 484 NKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTY 543

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            +L+  +       +A +I+Q M + G  P   T+  L       G  + A ++L  I+ 
Sbjct: 544 NSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQM 603

Query: 522 K 522
           K
Sbjct: 604 K 604



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/496 (24%), Positives = 224/496 (45%), Gaps = 39/496 (7%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF-NSIHSIMS 131
           ++ T +M   IE G    A  I   ++E G   S V+   ++     + R  ++++ I  
Sbjct: 225 KTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQE 284

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
              ++G  PD   FN ++N   ++G+++ A++    M + G  P   TYN++I G    G
Sbjct: 285 MSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLG 344

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+V+ LD M    +  PN  TYN L+   C E  + EA  +   + + G+ PDV T+
Sbjct: 345 EVKEAVEFLDQMITR-DCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTF 403

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++            A E+  EM   G +P+  T  ++I   C +GK+ EAL   + M+ 
Sbjct: 404 NSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMEL 463

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G   +++ +N LI GF +       +E+   M+   V+ + +TY+T+++    +  ++ 
Sbjct: 464 SGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVED 523

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++ D M   G KPD   Y+ L   + R  + +KA +++  M  +G  P++V + T+IS
Sbjct: 524 ASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLIS 583

Query: 432 GWCSDGSMD-----------------------------------RAIEVFDKMCEHG-VS 455
           G C  G ++                                    AI +F +M E    +
Sbjct: 584 GLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAA 643

Query: 456 PNLKTFETLMWGYSEARQPWR-AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
           P+  ++  +  G      P R A + L  +   G  P+ S+  +LAE      + +   +
Sbjct: 644 PDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETLVK 703

Query: 515 ILSKIKNKERTNEMEA 530
           +++ +  K R +E E 
Sbjct: 704 LVNMVMQKARFSEEEV 719



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 196/422 (46%), Gaps = 3/422 (0%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G KP    Y  +L  L        +    +++   G+ PD   FN +I A   +  +  A
Sbjct: 149 GLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPA 208

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           +     M   GL P   T+ T+++GY   G  + ++++ + M   G    N+ + NV+V 
Sbjct: 209 ILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNV-SVNVIVH 267

Query: 222 AWCNEKNITEAWNVMHKMA-ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
            +C E  + +A N + +M+   G  PD  T+NT+     + G    A E++  M   G  
Sbjct: 268 GFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYD 327

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+  T   +ISG CK G++KEA+ F   M      PN V +N LI    +    +   E+
Sbjct: 328 PDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATEL 387

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
             ++    + PDV T+++++             E+F++M   G +PD   Y++L      
Sbjct: 388 ARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCS 447

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
           + + ++A  +L  M  SG   +V+ + T+I G+C    +  A E+FD+M  HGVS N  T
Sbjct: 448 KGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVT 507

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-LLLAEARRATGLTKEAKRILSKI 519
           + TL+ G  ++R+   A +++  M   G  P K T+  LL    R   + K A  + +  
Sbjct: 508 YNTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMT 567

Query: 520 KN 521
            N
Sbjct: 568 SN 569



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 186/386 (48%), Gaps = 9/386 (2%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P+   +  ++     SG+ ++       MK SG    TS +  LI+ Y      +E + +
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGV 140

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           +  M  +  +KP+   YN ++    +  N+        KM+  G+KPDV T+N +  A  
Sbjct: 141 VHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALC 200

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +  +   A  ++ +M   G+ P+ +T   I+ GY +EG +  ALR    M E+G   + V
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260

Query: 320 IFNLLIKGFVEIMDRDG-VDEVLALMKEFR----VNPDVITYSTIMNAWSTAGFMDKCKE 374
             N+++ GF     ++G V++ L  ++E        PD  T++T++N    AG +    E
Sbjct: 261 SVNVIVHGFC----KEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           I D M + G  PD + Y+ +  G  +  E ++A E L  MI     PN V + T+IS  C
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLC 376

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +  ++ A E+   +   G+ P++ TF +L+ G    R    A E+ + M++ G  P + 
Sbjct: 377 KENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEF 436

Query: 495 TFLLLAEARRATGLTKEAKRILSKIK 520
           T+ +L ++  + G   EA  +L +++
Sbjct: 437 TYNMLIDSLCSKGKLDEALNMLKQME 462



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 90/365 (24%), Positives = 175/365 (47%), Gaps = 38/365 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR--------- 122
           V +   +++ L + G+ +EA    + +I     P+ VTY TL++ L  + +         
Sbjct: 330 VYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELAR 389

Query: 123 -------------FNSI---------HSIMSQVEE----NGMDPDSIFFNAVINAFSESG 156
                        FNS+         H +  ++ E     G +PD   +N +I++    G
Sbjct: 390 VLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKG 449

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            ++EA++   +M+ SG   +  TYNTLI G+  A K  E+ ++ D M   G V  N  TY
Sbjct: 450 KLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHG-VSRNSVTY 508

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N L+   C  + + +A  +M +M   G KPD  TYN++ T + + G+  +A +++  M  
Sbjct: 509 NTLIDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTS 568

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG-FVEIMDRD 335
           NG +P+  T G +ISG CK G+++ A +  R+++  G+      +N +I+G F +    +
Sbjct: 569 NGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTE 628

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF-MDKCKEIFDDMGKAGIKPDAHAYSIL 394
            ++    ++++    PD ++Y  +       G  + +  +   ++ + G  P+  +  +L
Sbjct: 629 AINLFREMLEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYML 688

Query: 395 AKGYV 399
           A+G +
Sbjct: 689 AEGLL 693



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 100/214 (46%), Gaps = 3/214 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R+V +   L++   +  K +EA+ IF+ +   G   + VTY TL+  L   +R      +
Sbjct: 468 RSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQL 527

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           M Q+   G  PD   +N+++  F   G++++A D    M  +G  P   TY TLI G   
Sbjct: 528 MDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCK 587

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-MKPDV 248
           AG+ E + KLL  +  +G +      YN +++    ++  TEA N+  +M       PD 
Sbjct: 588 AGRVEVASKLLRSIQMKG-IALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNEAAPDA 646

Query: 249 VTYNTIATAYAQ-NGEADQAEEVIVEMEHNGVQP 281
           V+Y  +        G   +A + +VE+   G  P
Sbjct: 647 VSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVP 680



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 39/168 (23%), Positives = 78/168 (46%), Gaps = 3/168 (1%)

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
           +P+   Y  I+     +G  D  ++I +DM  +G +     + IL + Y + +  ++   
Sbjct: 80  SPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILG 139

Query: 410 LLMTMIES-GFHPNVVIFTTIISGWCSDGSMDRAIEV-FDKMCEHGVSPNLKTFETLMWG 467
           ++  MI+  G  P+   +  +++    DG+  + +E+   KM   G+ P++ TF  L+  
Sbjct: 140 VVHWMIDDFGLKPDTHFYNRMLN-LLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKA 198

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
              A Q   A  +L+ M ++G+ P + TF  + +     G    A RI
Sbjct: 199 LCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRI 246


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 219/447 (48%), Gaps = 4/447 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T  +  L   GK  EA  I   + + G  P +VTYT L+ AL   ++ +    +  
Sbjct: 258 VYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFE 317

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIA 190
           +++     PD + +  +++ FS++ +++ ++  FW +M++ G  P   T+  L+     A
Sbjct: 318 KMKTGRHKPDRVTYITLLDRFSDNRDLD-SVKQFWSEMEKDGHVPDVVTFTILVDALCKA 376

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E+   LD+M  +G + PNL TYN L+        + +A  +   M + G+KP   T
Sbjct: 377 GNFGEAFDTLDVMRDQG-ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYT 435

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y      Y ++G++  A E   +M+  G+ PN   C   +    K G+ +EA +    +K
Sbjct: 436 YIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLK 495

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G+ P+ V +N+++K + ++ + D   ++L+ M E    PDVI  ++++N    A  +D
Sbjct: 496 DIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVD 555

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  ++F  M +  +KP    Y+ L  G  +  + ++A EL   M++ G  PN + F T+ 
Sbjct: 556 EAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLF 615

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C +  +  A+++  KM + G  P++ T+ T+++G  +  Q   A      MK   V+
Sbjct: 616 DCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VY 674

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILS 517
           P   T   L        L ++A +I++
Sbjct: 675 PDFVTLCTLLPGVVKASLIEDAYKIIT 701



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 90/326 (27%), Positives = 167/326 (51%), Gaps = 9/326 (2%)

Query: 102  GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
            G +P L TY  L+  L           +  QV+  G  PD   +N +++A+ +SG ++E 
Sbjct: 780  GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839

Query: 162  MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLV 220
             + + +M        T T+N +I G   AG  ++++ L  DLMS + +  P   TY  L+
Sbjct: 840  FELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMS-DRDFSPTACTYGPLI 898

Query: 221  RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
                    + EA  +   M   G +P+   YN +   + + GEAD A  +   M   GV+
Sbjct: 899  DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958

Query: 281  PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
            P+ +T  +++   C  G++ E L + + +KE G++P++V +NL+I G  +      ++E 
Sbjct: 959  PDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK---SHRLEEA 1015

Query: 341  LALMKEFR----VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            L L  E +    + PD+ TY++++     AG +++  +I++++ +AG++P+   ++ L +
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075

Query: 397  GYVREQEPEKAEELLMTMIESGFHPN 422
            GY    +PE A  +  TM+  GF PN
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPN 1101



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 126/515 (24%), Positives = 218/515 (42%), Gaps = 71/515 (13%)

Query: 52  TDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYT 111
           TDS      S   N     T  +   ++ +L   GK +E   +F+ + +   K    TY 
Sbjct: 98  TDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYL 157

Query: 112 TLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES 171
           T+  +L+++         + ++ E G   ++  +N +I+   +S    EAM+ + +M   
Sbjct: 158 TIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILE 217

Query: 172 GLTPTTSTYNTLIKGYGI-----------------------------------AGKPEES 196
           G  P+  TY++L+ G G                                    AGK  E+
Sbjct: 218 GFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEA 277

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            ++L  M  EG   P++ TY VL+ A C  + +  A  V  KM     KPD VTY T+  
Sbjct: 278 YEILKRMDDEG-CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLD 336

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            ++ N + D  ++   EME +G  P+  T  I++   CK G   EA      M++ G+ P
Sbjct: 337 RFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILP 396

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW------------- 363
           NL  +N LI G + +   D   E+   M+   V P   TY   ++ +             
Sbjct: 397 NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETF 456

Query: 364 ----------------------STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
                                 + AG   + K+IF  +   G+ PD+  Y+++ K Y + 
Sbjct: 457 EKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV 516

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            E ++A +LL  M+E+G  P+V++  ++I+       +D A ++F +M E  + P + T+
Sbjct: 517 GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTY 576

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            TL+ G  +  +   A E+ + M   G  P   TF
Sbjct: 577 NTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF 611



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 203/429 (47%), Gaps = 8/429 (1%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNN-LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
            ++  L+  +++    ++A  I  N L     +P+ + +  L+ ++  +   ++  S   +
Sbjct: 679  TLCTLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSER 738

Query: 133  VEENGM--DPDSIFFNAVINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLIKGYGI 189
            +  NG+  D DSI    +I    +  N+  A   F K  K+ G+ P   TYN LI G   
Sbjct: 739  LVANGICRDGDSILV-PIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLE 797

Query: 190  AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            A   E +  +   +   G + P++ TYN L+ A+     I E + +  +M+    + + +
Sbjct: 798  ADMIEIAQDVFLQVKSTGCI-PDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTI 856

Query: 250  TYNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            T+N + +   + G  D A ++  + M      P   T G +I G  K G++ EA +    
Sbjct: 857  THNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEG 916

Query: 309  MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
            M +YG  PN  I+N+LI GF +  + D    +   M +  V PD+ TYS +++     G 
Sbjct: 917  MLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGR 976

Query: 369  MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES-GFHPNVVIFT 427
            +D+    F ++ ++G+ PD   Y+++  G  +    E+A  L   M  S G  P++  + 
Sbjct: 977  VDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYN 1036

Query: 428  TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            ++I      G ++ A ++++++   G+ PN+ TF  L+ GYS + +P  A  + Q M   
Sbjct: 1037 SLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTG 1096

Query: 488  GVHPQKSTF 496
            G  P   T+
Sbjct: 1097 GFSPNTGTY 1105



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/489 (22%), Positives = 217/489 (44%), Gaps = 40/489 (8%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            TV +   L+  L + GK QEA  +F  +++ G  P+ +T+ TL   L           ++
Sbjct: 572  TVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKML 631

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG---- 186
             ++ + G  PD   +N +I    ++G ++EAM  F +MK+  + P   T  TL+ G    
Sbjct: 632  FKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPGVVKA 690

Query: 187  --------------YGIAGKP------------------EESVKLLDLMSREGNVKPNLR 214
                          Y  A +P                  + +V   + +   G  +    
Sbjct: 691  SLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDS 750

Query: 215  TYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
                ++R  C   N++ A  +  K     G++P + TYN +     +    + A++V ++
Sbjct: 751  ILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQ 810

Query: 274  MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
            ++  G  P+  T   ++  Y K GKI E     + M  +    N +  N++I G V+  +
Sbjct: 811  VKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGN 870

Query: 334  -RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
              D +D    LM +   +P   TY  +++  S +G + + K++F+ M   G +P+   Y+
Sbjct: 871  VDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYN 930

Query: 393  ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            IL  G+ +  E + A  L   M++ G  P++  ++ ++   C  G +D  +  F ++ E 
Sbjct: 931  ILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKES 990

Query: 453  GVSPNLKTFETLMWGYSEARQPWRAEEILQIMK-AFGVHPQKSTFLLLAEARRATGLTKE 511
            G++P++  +  ++ G  ++ +   A  +   MK + G+ P   T+  L       G+ +E
Sbjct: 991  GLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEE 1050

Query: 512  AKRILSKIK 520
            A +I ++I+
Sbjct: 1051 AGKIYNEIQ 1059



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 174/380 (45%), Gaps = 9/380 (2%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++ A    G +EE    F  M++  +   T+TY T+ K   + G  +++   L  M R
Sbjct: 122 NYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM-R 180

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           E     N  +YN L+      +  TEA  V  +M   G +P + TY+++     +  + D
Sbjct: 181 EFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDID 240

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
               ++ EME  G++PN  T  I I    + GKI EA    + M + G  P++V + +LI
Sbjct: 241 SVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLI 300

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                    D   EV   MK  R  PD +TY T+++ +S    +D  K+ + +M K G  
Sbjct: 301 DALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHV 360

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   ++IL     +     +A + L  M + G  PN+  + T+I G      +D A+E+
Sbjct: 361 PDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEL 420

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ----KSTFLLLAE 501
           F  M   GV P   T+   +  Y ++     A E  + MK  G+ P      ++   LA+
Sbjct: 421 FGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAK 480

Query: 502 ARRATGLTKEAKRILSKIKN 521
           A R     +EAK+I   +K+
Sbjct: 481 AGR----DREAKQIFYGLKD 496



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 98/411 (23%), Positives = 189/411 (45%), Gaps = 1/411 (0%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           T   +L AL +  +   +  +   +++  +  D+  +  +  + S  G +++A     KM
Sbjct: 120 TCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
           +E G      +YN LI     +    E++++   M  EG  +P+L+TY+ L+      ++
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEG-FRPSLQTYSSLMVGLGKRRD 238

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           I     ++ +M   G+KP+V T+        + G+ ++A E++  M+  G  P+  T  +
Sbjct: 239 IDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTV 298

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +I   C   K+  A      MK     P+ V +  L+  F +  D D V +  + M++  
Sbjct: 299 LIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDG 358

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             PDV+T++ +++A   AG   +  +  D M   GI P+ H Y+ L  G +R    + A 
Sbjct: 359 HVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDAL 418

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           EL   M   G  P    +   I  +   G    A+E F+KM   G++PN+      ++  
Sbjct: 419 ELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSL 478

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           ++A +   A++I   +K  G+ P   T+ ++ +     G   EA ++LS++
Sbjct: 479 AKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEM 529



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 162/333 (48%), Gaps = 9/333 (2%)

Query: 137  GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            G+ P    +N +I    E+  +E A D F ++K +G  P  +TYN L+  YG +GK +E 
Sbjct: 780  GVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDEL 839

Query: 197  VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK-MAASGMKPDVVTYNTIA 255
             +L   MS     + N  T+N+++       N+ +A ++ +  M+     P   TY  + 
Sbjct: 840  FELYKEMSTH-ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLI 898

Query: 256  TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               +++G   +A+++   M   G +PN     I+I+G+ K G+   A    + M + GV 
Sbjct: 899  DGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVR 958

Query: 316  PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKC 372
            P+L  +++L+     +     VDE L   KE +   +NPDV+ Y+ I+N    +  +++ 
Sbjct: 959  PDLKTYSVLVDCLCMV---GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEA 1015

Query: 373  KEIFDDMGKA-GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F++M  + GI PD + Y+ L          E+A ++   +  +G  PNV  F  +I 
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075

Query: 432  GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            G+   G  + A  V+  M   G SPN  T+E L
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 147/354 (41%), Gaps = 43/354 (12%)

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI------------- 254
           N+     T N ++ A   +  + E   V   M    +K D  TY TI             
Sbjct: 113 NLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQA 172

Query: 255 -------------ATAYAQNGE---------ADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
                          AY+ NG            +A EV   M   G +P+ +T   ++ G
Sbjct: 173 PYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVG 232

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG----VDEVLALMKEFR 348
             K   I   +   + M+  G+ PN+  F + I+    ++ R G      E+L  M +  
Sbjct: 233 LGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIR----VLGRAGKINEAYEILKRMDDEG 288

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             PDV+TY+ +++A  TA  +D  KE+F+ M     KPD   Y  L   +   ++ +  +
Sbjct: 289 CGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVK 348

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           +    M + G  P+VV FT ++   C  G+   A +  D M + G+ PNL T+ TL+ G 
Sbjct: 349 QFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGL 408

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
               +   A E+   M++ GV P   T+++  +    +G +  A     K+K K
Sbjct: 409 LRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTK 462



 Score = 59.7 bits (143), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/107 (30%), Positives = 53/107 (49%), Gaps = 1/107 (0%)

Query: 78   LMNSLIERGKPQEAQAIFNNL-IEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
            ++N L +  + +EA  +FN +    G  P L TY +L+  L I         I ++++  
Sbjct: 1002 IINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRA 1061

Query: 137  GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            G++P+   FNA+I  +S SG  E A   +  M   G +P T TY  L
Sbjct: 1062 GLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 204/400 (51%), Gaps = 12/400 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ + + G+ + A  +   +++ G  P++V+Y+ ++ +L +        ++ +Q+   G
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            D +   F  +I      G + EA+D +  M + G  P    YNTLI G    G  EE++
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++ D M R G + PN+ TY++L+  +    ++  A    ++M + G +P+VVTY  +   
Sbjct: 370 QVCDQMQRSGCL-PNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +N   DQA  ++ +M   G  PN  T    I G C  G+++ A++    M+ +G  PN
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
           +  +N L+     +   +  +E   L +E     + P+++TY+T++  +S AG M +  +
Sbjct: 489 ITTYNELLDALFRM---NKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQ 545

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL---MTMIESGFHPNVVIFTTIIS 431
           +F      G  PD+  Y+ +   Y ++ + + A +L+    +M E  +HP+++ +T++I 
Sbjct: 546 LFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE--WHPDIITYTSLIW 603

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
           G C+  +++ A+   DK    G+ PN  T+  L+  + ++
Sbjct: 604 GACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDS 643



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 210/441 (47%), Gaps = 6/441 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N     G  ++A  +F  + E G KP++  Y  LL AL  + +F  I+ + + ++++G
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +N ++ A  ++  ++ A   F +M   G  P   TY T++     AGK +++ 
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR 234

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L       G  KP++  YN L+   C E  I  A  ++ +M  +G+ P+VV+Y+ I  +
Sbjct: 235 EL------AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINS 288

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
              +G  + A  +  +M   G   N  T   +I G    GK+ EAL   + M + G  PN
Sbjct: 289 LCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPN 348

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N LI G       +   +V   M+     P+V TYS +++ ++ +G +    E ++
Sbjct: 349 VVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWN 408

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G +P+   Y+ +     +    ++A  L+  M   G  PN + F T I G C +G
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNG 468

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ A+++ ++M  HG  PN+ T+  L+       +   A  + Q ++A  + P   T+ 
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528

Query: 498 LLAEARRATGLTKEAKRILSK 518
            +       G+  EA ++  K
Sbjct: 529 TVLYGFSRAGMMGEALQLFGK 549



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 207/449 (46%), Gaps = 6/449 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TVR    L+++L+   K Q    ++ N+ + G  P++ TY  LL AL    R ++ H + 
Sbjct: 143 TVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLF 202

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G  PD++ +  ++++  ++G +++A +   + K     P+   YN LI G    
Sbjct: 203 VEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCKE 257

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ E ++KLL  M   G V PN+ +Y+ ++ + C   N+  A+ +  +M   G   ++ T
Sbjct: 258 GRIEVAIKLLGEMMDNG-VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHT 316

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +  +       G+  +A ++   M  +G +PN      +I G C  G ++EAL+    M+
Sbjct: 317 FTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQ 376

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PN+  +++LI GF +  D  G  E    M      P+V+TY+ +++        D
Sbjct: 377 RSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFD 436

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   + + M   G  P+   ++   KG       E A +LL  M   G  PN+  +  ++
Sbjct: 437 QANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELL 496

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
                    + A  +F ++    + PNL T+ T+++G+S A     A ++       G  
Sbjct: 497 DALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTA 556

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
           P   T+  +  A    G  K A +++ ++
Sbjct: 557 PDSITYNTMIHAYCKQGKVKIAAQLVERV 585



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 211/450 (46%), Gaps = 43/450 (9%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           TY  ++  L  +   + +  I+ Q++ +G++     F  +IN +   G+ E+A+  F+++
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
            E G  PT   YN L+       K +    L   M ++G + PN+ TYN+L++A C    
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLI-PNVFTYNILLKALCKNDR 194

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           +  A  +  +M+  G  PD VTY T+ ++  + G+ D A E+         +P+      
Sbjct: 195 VDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNA 249

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLV-----IFNLLIKGFVEI-------MDRDG 336
           +I G CKEG+I+ A++    M + GV PN+V     I +L + G VE+       M   G
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309

Query: 337 VD-----------------------EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
            D                       ++  LM +    P+V+ Y+T+++   + G +++  
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           ++ D M ++G  P+   YSIL  G+ +  +   A E    MI  G  PNVV +T ++   
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS-EARQPWRAEEILQIMKAFGVHPQ 492
           C +   D+A  + +KM   G +PN  TF T + G     R  W A ++L+ M+  G  P 
Sbjct: 430 CKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEW-AMKLLERMQGHGCLPN 488

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            +T+  L +A       +EA  +  +I+ +
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEAR 518



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 131/280 (46%), Gaps = 3/280 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C   V + + L++   + G    A   +N +I  G +P++VTYT ++  L     
Sbjct: 375 MQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSM 434

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F+  +S++ ++   G  P+++ FN  I     +G +E AM    +M+  G  P  +TYN 
Sbjct: 435 FDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNE 494

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+       K EE+  L   +    N++PNL TYN ++  +     + EA  +  K    
Sbjct: 495 LLDALFRMNKYEEAFGLFQEIEAR-NLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVR 553

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKE 301
           G  PD +TYNT+  AY + G+   A +++  +       P+  T   +I G C    I+E
Sbjct: 554 GTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEE 613

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           A+ F       G+ PN   +N L++ F + +   G   +L
Sbjct: 614 AMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHIL 653



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/316 (20%), Positives = 133/316 (42%), Gaps = 42/316 (13%)

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYNTIATAYAQNGE 263
           R+ N +  L+  +VL R    ++N++        +A S   +    TY  +     +  E
Sbjct: 31  RDPNKQQLLQESDVLKRLK-TDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECE 89

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D  + ++ +M+ +G+         II+GY + G  ++AL+    + E+G  P + I+N 
Sbjct: 90  MDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNH 149

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           L+            D +L+  K   +NP                       ++ +M K G
Sbjct: 150 LL------------DALLSENKFQMINP-----------------------LYTNMKKDG 174

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           + P+   Y+IL K   +    + A +L + M   G  P+ V +TT++S  C  G +D A 
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR 234

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           E+  +       P++  +  L+ G  +  +   A ++L  M   GV P   ++  +  + 
Sbjct: 235 ELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289

Query: 504 RATGLTKEAKRILSKI 519
             +G  + A  + +++
Sbjct: 290 CVSGNVELAFALFAQM 305


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 199/405 (49%), Gaps = 2/405 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +L+ERG  Q+ +A+   +   G  P+LVTY  ++  L   ++  +     +++   G
Sbjct: 320 LITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMG 379

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD I +N+++N + ++GN++EA+     ++ +GL PT  TYNTLI GY   G  EE+ 
Sbjct: 380 LLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEAR 439

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L + M  +G   P++ TY +L+      +N+  A     +M + G++PD   YNT   A
Sbjct: 440 RLKEEMVEQGCF-PDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICA 498

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G+  +A ++   M   G+ P+  T  +II G CK G +K+A      M   G+ P+
Sbjct: 499 ELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPD 558

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +  LI    E        ++L  M    + P V+TY+ +++     G +      F 
Sbjct: 559 CITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFR 618

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   GI+P+   Y++L     R      A      M+E G  PN   +T +I G C +G
Sbjct: 619 KMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREG 678

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           +   AI ++ +M ++G+ P+  T   L  G+ +    + A E L+
Sbjct: 679 NWADAIRLYFEMHQNGIPPDYCTHNALFKGFDKGHM-YHAIEYLE 722



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/476 (24%), Positives = 220/476 (46%), Gaps = 19/476 (3%)

Query: 47  SNSKPTDSQPQTHCSFCMNK---ESCR----TVRSMTKLMNSLIERGKPQEAQAIFNNLI 99
           + S+  D+ P    + C+      +C      VR    ++  L +  +  + +A++  ++
Sbjct: 176 AESQARDATPAACSTLCLAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREML 235

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDP--DSIFFNAVINAFSESGN 157
           +   +P++VTY TLL +   + R +    ++ ++E  G     + + +N VI+  +  G+
Sbjct: 236 QLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGH 295

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           +E A      M+ S    ++ TYN LI      G  ++   L   M  EG + P L TYN
Sbjct: 296 LENAAKLVDSMRLSK-KASSFTYNPLITALLERGFVQKVEALQMEMENEG-IMPTLVTYN 353

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++      + +  A     +M A G+ PD++TYN++   Y + G   +A  ++ ++   
Sbjct: 354 AIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRA 413

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI----MD 333
           G+ P   T   +I GYC+ G ++EA R    M E G  P++  + +L+ G  ++    M 
Sbjct: 414 GLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMA 473

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
           R+  DE+L+      + PD   Y+T + A    G   K  ++ + M   GI PD   Y++
Sbjct: 474 REFFDEMLSK----GLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNV 529

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           +  G  +    + A++L M M+  G  P+ + +T +I   C  G +  A ++ + M   G
Sbjct: 530 IIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDG 589

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
           + P++ T+  L+         + A    + M   G+ P + T+ +L  A   TG T
Sbjct: 590 LQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRT 645



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/447 (24%), Positives = 203/447 (45%), Gaps = 4/447 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIE--GGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           T+ +   L++S ++ G+  EA  +   +    GG   + VTY  +++ L  +    +   
Sbjct: 242 TIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAK 301

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++  +  +     S  +N +I A  E G +++      +M+  G+ PT  TYN +I G  
Sbjct: 302 LVDSMRLSK-KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGL- 359

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
           +  +  E+ +L     R   + P+L TYN ++  +C   N+ EA  ++  +  +G+ P V
Sbjct: 360 LKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTV 419

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           +TYNT+   Y + G  ++A  +  EM   G  P+  T  I+++G  K   +  A  F   
Sbjct: 420 LTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDE 479

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M   G+ P+   +N  I   + + D     ++  +M    + PD +TY+ I++     G 
Sbjct: 480 MLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGN 539

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +   K++   M   G++PD   Y+ L   +       +A +LL  M+  G  P+VV +T 
Sbjct: 540 LKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTI 599

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I   C  G++  A   F KM + G+ PN  T+  L+       +   A      M   G
Sbjct: 600 LIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERG 659

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRI 515
           + P K T+ LL +     G   +A R+
Sbjct: 660 LAPNKYTYTLLIDGNCREGNWADAIRL 686



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 101/390 (25%), Positives = 189/390 (48%), Gaps = 10/390 (2%)

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           V  +G+ PD    N V+    ++   ++    + +M +  + PT  TYNTL+  +   G+
Sbjct: 199 VACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGR 258

Query: 193 PEESVKLLDLM-SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
            +E+  LL  M ++ G    N  TYNV++     E ++  A  ++  M  S  K    TY
Sbjct: 259 KDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-KASSFTY 317

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRFARTMK 310
           N + TA  + G   + E + +EME+ G+ P   T   II G  K  +++ A L+FA  M+
Sbjct: 318 NPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAE-MR 376

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
             G+ P+L+ +N ++ G+ +      + E L L+ + R   + P V+TY+T+++ +   G
Sbjct: 377 AMGLLPDLITYNSMLNGYCKA---GNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 433

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +++ + + ++M + G  PD   Y+IL  G  + +    A E    M+  G  P+   + 
Sbjct: 434 GLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYN 493

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T I      G   +A ++ + M   G+ P+  T+  ++ G  +      A+++   M + 
Sbjct: 494 TRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSD 553

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           G+ P   T+  L  A    GL  EA+++L+
Sbjct: 554 GLQPDCITYTCLIHAHCERGLLSEARKLLN 583



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/257 (29%), Positives = 125/257 (48%), Gaps = 1/257 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T LMN   +      A+  F+ ++  G +P    Y T + A  I    +    +  
Sbjct: 454 VCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLRE 513

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ PD++ +N +I+   ++GN+++A D   KM   GL P   TY  LI  +   G
Sbjct: 514 VMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERG 573

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E+ KLL+ M  +G ++P++ TY +L+   C   N+  A+    KM   G++P+ +TY
Sbjct: 574 LLSEARKLLNGMVSDG-LQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITY 632

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  A  + G    A     EM   G+ PN  T  ++I G C+EG   +A+R    M +
Sbjct: 633 NVLIHALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQ 692

Query: 312 YGVHPNLVIFNLLIKGF 328
            G+ P+    N L KGF
Sbjct: 693 NGIPPDYCTHNALFKGF 709



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 60/117 (51%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + T L+++   RG    A   F  +++ G +P+ +TY  L+ AL    R    +   
Sbjct: 593 SVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHF 652

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            ++ E G+ P+   +  +I+     GN  +A+  +++M ++G+ P   T+N L KG+
Sbjct: 653 HEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKGF 709



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 51/245 (20%), Positives = 97/245 (39%), Gaps = 36/245 (14%)

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
           R +  +GV P++   N +++   +    D V  V   M +  + P ++TY+T+++++   
Sbjct: 197 RVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKE 256

Query: 367 GFMDKCKEIFDDMGKAG------------------------------------IKPDAHA 390
           G  D+   +  +M   G                                     K  +  
Sbjct: 257 GRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFT 316

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ L    +     +K E L M M   G  P +V +  II G      ++ A   F +M 
Sbjct: 317 YNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMR 376

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
             G+ P+L T+ +++ GY +A     A  +L  ++  G+ P   T+  L +     G  +
Sbjct: 377 AMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLE 436

Query: 511 EAKRI 515
           EA+R+
Sbjct: 437 EARRL 441


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/441 (25%), Positives = 210/441 (47%), Gaps = 6/441 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N     G  ++A  +F  + E G KP++  Y  LL AL  + +F  I+ + + ++++G
Sbjct: 115 IINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDG 174

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +N ++ A  ++  ++ A   F +M   G  P   TY T++     AGK +++ 
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR 234

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L       G  KP++  YN L+   C E  I  A  ++ +M  +G+ P+VV+Y+ I  +
Sbjct: 235 EL------AGRFKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINS 288

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
              +G  + A  +  +M   G   N  T   +I G    GK+ EAL   + M + G  PN
Sbjct: 289 LCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPN 348

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N LI G       +   +V   M+     P+V TYS +++ ++ +G +    E ++
Sbjct: 349 VVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWN 408

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G +P+   Y+ +     +    ++A  L+  M   G  PN + F T I G C +G
Sbjct: 409 RMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNG 468

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ A+++ ++M  HG  PN+ T+  L+       +   A  + Q ++A  + P   T+ 
Sbjct: 469 RVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYN 528

Query: 498 LLAEARRATGLTKEAKRILSK 518
            +       G+  EA ++  K
Sbjct: 529 TVLYGFSRAGMMGEALQLFGK 549



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 204/400 (51%), Gaps = 12/400 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ + + G+ + A  +   +++ G  P++V+Y+ ++ +L +        ++ +Q+   G
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            D +   F  +I      G + EA+D +  M + G  P    YNTLI G    G  EE++
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++ D M R G + PN+ TY++L+  +    ++  A    ++M + G +P+VVTY  +   
Sbjct: 370 QVCDQMQRSGCL-PNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDV 428

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +N   DQA  ++ +M   G  PN  T    I G C  G+++ A++    M+ +G  PN
Sbjct: 429 LCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPN 488

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
           +  +N L+     +   +  +E   L +E     + P+++TY+T++  +S AG M +  +
Sbjct: 489 ITTYNELLDALFRM---NKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQ 545

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL---MTMIESGFHPNVVIFTTIIS 431
           +F      G  PD+  Y+ +   Y ++ + + A +L+    +M E  +HP+++ +T++I 
Sbjct: 546 LFGKALVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKE--WHPDIITYTSLIW 603

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
           G C+  +++ A+   DK    G+ PN  T+  L+  + ++
Sbjct: 604 GACNWMNIEEAMAFLDKAINQGICPNFATWNALVRCFFDS 643



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 207/449 (46%), Gaps = 6/449 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TVR    L+++L+   K Q    ++ N+ + G  P++ TY  LL AL    R ++ H + 
Sbjct: 143 TVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLF 202

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G  PD++ +  ++++  ++G +++A +   + K     P+   YN LI G    
Sbjct: 203 VEMSNKGCPPDAVTYTTMVSSLCKAGKIDDARELAGRFK-----PSVPVYNALIDGMCKE 257

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ E ++KLL  M   G V PN+ +Y+ ++ + C   N+  A+ +  +M   G   ++ T
Sbjct: 258 GRIEVAIKLLGEMMDNG-VDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHT 316

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +  +       G+  +A ++   M  +G +PN      +I G C  G ++EAL+    M+
Sbjct: 317 FTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQ 376

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PN+  +++LI GF +  D  G  E    M      P+V+TY+ +++        D
Sbjct: 377 RSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFD 436

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   + + M   G  P+   ++   KG       E A +LL  M   G  PN+  +  ++
Sbjct: 437 QANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELL 496

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
                    + A  +F ++    + PNL T+ T+++G+S A     A ++       G  
Sbjct: 497 DALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTA 556

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
           P   T+  +  A    G  K A +++ ++
Sbjct: 557 PDSITYNTMIHAYCKQGKVKIAAQLVERV 585



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 211/450 (46%), Gaps = 43/450 (9%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           TY  ++  L  +   + +  I+ Q++ +G++     F  +IN +   G+ E+A+  F+++
Sbjct: 76  TYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRI 135

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
            E G  PT   YN L+       K +    L   M ++G + PN+ TYN+L++A C    
Sbjct: 136 GEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLI-PNVFTYNILLKALCKNDR 194

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           +  A  +  +M+  G  PD VTY T+ ++  + G+ D A E+         +P+      
Sbjct: 195 VDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAREL-----AGRFKPSVPVYNA 249

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLV-----IFNLLIKGFVEI-------MDRDG 336
           +I G CKEG+I+ A++    M + GV PN+V     I +L + G VE+       M   G
Sbjct: 250 LIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRG 309

Query: 337 VD-----------------------EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
            D                       ++  LM +    P+V+ Y+T+++   + G +++  
Sbjct: 310 CDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEAL 369

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           ++ D M ++G  P+   YSIL  G+ +  +   A E    MI  G  PNVV +T ++   
Sbjct: 370 QVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVL 429

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS-EARQPWRAEEILQIMKAFGVHPQ 492
           C +   D+A  + +KM   G +PN  TF T + G     R  W A ++L+ M+  G  P 
Sbjct: 430 CKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEW-AMKLLERMQGHGCLPN 488

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            +T+  L +A       +EA  +  +I+ +
Sbjct: 489 ITTYNELLDALFRMNKYEEAFGLFQEIEAR 518



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 131/280 (46%), Gaps = 3/280 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C   V + + L++   + G    A   +N +I  G +P++VTYT ++  L     
Sbjct: 375 MQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSM 434

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F+  +S++ ++   G  P++I FN  I     +G +E AM    +M+  G  P  +TYN 
Sbjct: 435 FDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNE 494

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+       K EE+  L   +    N++PNL TYN ++  +     + EA  +  K    
Sbjct: 495 LLDALFRMNKYEEAFGLFQEIEAR-NLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVR 553

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH-NGVQPNGRTCGIIISGYCKEGKIKE 301
           G  PD +TYNT+  AY + G+   A +++  +       P+  T   +I G C    I+E
Sbjct: 554 GTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEE 613

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           A+ F       G+ PN   +N L++ F + +   G   +L
Sbjct: 614 AMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHIL 653



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 66/316 (20%), Positives = 133/316 (42%), Gaps = 42/316 (13%)

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYNTIATAYAQNGE 263
           R+ N +  L+  +VL R    ++N++        +A S   +    TY  +     +  E
Sbjct: 31  RDPNKQQLLQESDVLKRLK-TDRNLSSVLGFFSAIANSNAFQHTASTYRVMIERLGRECE 89

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D  + ++ +M+ +G+         II+GY + G  ++AL+    + E+G  P + I+N 
Sbjct: 90  MDMVQYILQQMKMDGINCCEDLFICIINGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNH 149

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           L+            D +L+  K   +NP                       ++ +M K G
Sbjct: 150 LL------------DALLSENKFQMINP-----------------------LYTNMKKDG 174

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           + P+   Y+IL K   +    + A +L + M   G  P+ V +TT++S  C  G +D A 
Sbjct: 175 LIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDAR 234

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           E+  +       P++  +  L+ G  +  +   A ++L  M   GV P   ++  +  + 
Sbjct: 235 ELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSL 289

Query: 504 RATGLTKEAKRILSKI 519
             +G  + A  + +++
Sbjct: 290 CVSGNVELAFALFAQM 305


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/494 (24%), Positives = 231/494 (46%), Gaps = 41/494 (8%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           ++ T LM   IE    + A  I   ++E G + + V+   L+  L  + R     ++   
Sbjct: 235 KTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIE--EALRFI 292

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
            EE G  PD + FNA++N    +G++++ ++    M E G      TYN+LI G    G+
Sbjct: 293 YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGE 352

Query: 193 PEESVKLLD-LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
            +E+V++L  ++SR  + +PN  TYN L+   C E ++  A  +   + + G+ PDV T+
Sbjct: 353 IDEAVEILHHMVSR--DCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTF 410

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++          + A E+  EM+  G  P+  T  I+I   C E ++KEAL   + M+ 
Sbjct: 411 NSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEMEL 470

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G   N+V++N LI G  +       +++   M+   V+   +TY+T++N    +  +++
Sbjct: 471 SGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEE 530

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++ D M   G+KPD   Y+ + K + ++ + ++A +++  M  +G  P++V + T+I 
Sbjct: 531 AAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIG 590

Query: 432 GWCSDGSMD-----------------------------------RAIEVFDKMCEHGVSP 456
           G C  G +D                                    A+ +F +M E G  P
Sbjct: 591 GLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPP 650

Query: 457 NLKTFETLMWGYSEARQPWR-AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           ++ T++ +  G      P + A +    M   G+ P+  +F  LAE   +  +     ++
Sbjct: 651 DVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIQL 710

Query: 516 LSKIKNKERTNEME 529
           ++ +  K R ++ E
Sbjct: 711 INMVMEKGRFSQSE 724



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 216/481 (44%), Gaps = 42/481 (8%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           ++ L++  K +  + + + ++     P + T+  L+ AL    +      ++  +   G+
Sbjct: 171 LSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPNYGL 230

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            PD   F  ++  F E  ++E A+     M ESG   T+ + N L+ G    G+ EE+++
Sbjct: 231 RPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEEALR 290

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
            +     E    P+  T+N LV   C   +I +   +M  M   G + DV TYN++ +  
Sbjct: 291 FI---YEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGL 347

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
            + GE D+A E++  M     +PN  T   +I   CKE  ++ A   AR +   GV P++
Sbjct: 348 CKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDV 407

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD-------------------------- 352
             FN LI+G     +R+   E+   MKE   +PD                          
Sbjct: 408 CTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKE 467

Query: 353 ---------VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
                    V+ Y+T+++       +   ++IFD M   G+   +  Y+ L  G  + + 
Sbjct: 468 MELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKR 527

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            E+A +L+  MI  G  P+   +TT++  +C  G + RA ++   M  +G  P++ T+ T
Sbjct: 528 VEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGT 587

Query: 464 LMWGYSEARQPWRAEEILQI--MKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           L+ G  +A +   A ++L+   MK   + PQ    ++ A  +R    TKEA R+  ++  
Sbjct: 588 LIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKR--TKEAMRLFREMME 645

Query: 522 K 522
           K
Sbjct: 646 K 646



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 192/400 (48%), Gaps = 2/400 (0%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C    +   L+N L   G  ++   + + ++E G +  + TY +L++ L      +    
Sbjct: 299 CPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCKLGEIDEAVE 358

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           I+  +     +P+++ +N +I    +  ++E A +    +   G+ P   T+N+LI+G  
Sbjct: 359 ILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCTFNSLIQGLC 418

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
           +    E +++L + M  +G   P+  TY++L+ + C+E+ + EA  ++ +M  SG   +V
Sbjct: 419 LTSNREIAMELFEEMKEKG-CDPDEFTYSILIESLCSERRLKEALMLLKEMELSGCARNV 477

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           V YNT+     +N     AE++  +ME  GV  +  T   +I+G CK  +++EA +    
Sbjct: 478 VVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVEEAAQLMDQ 537

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M   G+ P+   +  ++K F +  D     +++  M      PD++TY T++     AG 
Sbjct: 538 MIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLIGGLCKAGR 597

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D   ++   +   G+     AY+ + +   + +  ++A  L   M+E G  P+V+ +  
Sbjct: 598 VDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDPPDVITYKI 657

Query: 429 IISGWCSDGS-MDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           +  G C+ G  +  A++   +M E G+ P   +F  L  G
Sbjct: 658 VFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGFLAEG 697



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 181/386 (46%), Gaps = 8/386 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L + G+  EA  I ++++    +P+ VTY TL+  L  +    +   +  
Sbjct: 337 VYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELAR 396

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ PD   FN++I     + N E AM+ F +MKE G  P   TY+ LI+      
Sbjct: 397 VLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSER 456

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E++ LL  M   G  + N+  YN L+   C    + +A ++  +M   G+    VTY
Sbjct: 457 RLKEALMLLKEMELSGCAR-NVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTY 515

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+     ++   ++A +++ +M   G++P+  T   ++  +C++G IK A    + M  
Sbjct: 516 NTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTL 575

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT---YSTIMNAWSTAGF 368
            G  P++V +  LI G  +      VD    L++  ++   V+T   Y+ ++ A      
Sbjct: 576 NGCEPDIVTYGTLIGGLCK---AGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKR 632

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP-EKAEELLMTMIESGFHPNVVIFT 427
             +   +F +M + G  PD   Y I+ +G      P ++A +  + M+E G  P    F 
Sbjct: 633 TKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFG 692

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHG 453
            +  G CS    D  I++ + + E G
Sbjct: 693 FLAEGLCSLSMEDTLIQLINMVMEKG 718



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/379 (24%), Positives = 180/379 (47%), Gaps = 7/379 (1%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK-LLDLM 203
           F+ ++   + +G+ +  +    +M  S +    ST+   ++ Y  +      +  L  LM
Sbjct: 95  FHELLRQLARAGSFDSMLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLM 154

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            R+  VKP+ R YNV +        +     +  KM A  + PDV T+N +  A  +  +
Sbjct: 155 ERDFAVKPDTRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQ 214

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
              A  ++ +M + G++P+ +T   ++ G+ +E  ++ ALR    M E G     V  N+
Sbjct: 215 LRPAILMLEDMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNV 274

Query: 324 LIKGFVEIMDRDG-VDEVLALM-KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           L+ G      ++G ++E L  + +E    PD +T++ ++N     G + +  E+ D M +
Sbjct: 275 LVNGLC----KEGRIEEALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLE 330

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G + D + Y+ L  G  +  E ++A E+L  M+     PN V + T+I   C +  ++ 
Sbjct: 331 KGFELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEA 390

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A E+   +   GV P++ TF +L+ G         A E+ + MK  G  P + T+ +L E
Sbjct: 391 ATELARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIE 450

Query: 502 ARRATGLTKEAKRILSKIK 520
           +  +    KEA  +L +++
Sbjct: 451 SLCSERRLKEALMLLKEME 469


>gi|449455399|ref|XP_004145440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Cucumis sativus]
          Length = 576

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 201/426 (47%), Gaps = 2/426 (0%)

Query: 60  CSFCMNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT 118
           C + MNK + R  V     LM++  +R   ++ ++ +  L+E    P+  TY  LL A  
Sbjct: 142 CEWIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYC 201

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
                    ++ +++ + G+ P +I +NA I+   + GN  +A++ F +MK  G  PTT 
Sbjct: 202 KSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTD 261

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           TY  LI  YG   K   +  + D M R    KPN+ T+  LV A   E    +A  +  +
Sbjct: 262 TYTMLINVYGKESKSHMAQNIFDEM-RTQRCKPNICTFTALVNALAREGLCEKAEEIFEQ 320

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  +G +PDV  YN +  +Y++ G    A E+   M+H G +P+  +  I++  Y + G 
Sbjct: 321 MQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 380

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
            ++A      MK  G+ P +    LL+  +    +    ++++  M +  + PD    ++
Sbjct: 381 HEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNS 440

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++N +   G   K +++F  M K   + D   Y+IL   Y R    E+ EEL   +    
Sbjct: 441 MLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKN 500

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P+VV +T+ I  +       R +E+F+KM + G  P+  T + L+   S   Q  +  
Sbjct: 501 LEPDVVTWTSRIGAYSRKKLYKRCLELFEKMIDAGCYPDGGTAKVLLSACSSEEQIEQVT 560

Query: 479 EILQIM 484
            +++ M
Sbjct: 561 NVVRTM 566



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 169/357 (47%), Gaps = 1/357 (0%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD I +N +++A+ +    ++   T+ ++ ES   PT  TY  L+K Y  +G  E++  +
Sbjct: 153 PDVIVYNLLMDAYGQRSLYKDVESTYLELLESHCIPTEDTYALLLKAYCKSGLLEKAEAV 212

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
              M + G + P+   YN  +       N  +A  + H+M   G +P   TY  +   Y 
Sbjct: 213 FAEMRKYG-LSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTTDTYTMLINVYG 271

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +  ++  A+ +  EM     +PN  T   +++   +EG  ++A      M+E G  P++ 
Sbjct: 272 KESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQMQEAGYEPDVY 331

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            +N L++ +       G  E+ +LM+     PD  +Y+ +++A+  AG  +  + +F++M
Sbjct: 332 AYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGLHEDAQAVFEEM 391

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            + GI P   ++ +L   Y       K E+++  M +SG  P+  +  ++++ +   G  
Sbjct: 392 KRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNSMLNLYGRLGQF 451

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            +  ++F  M +     ++ T+  L+  Y  A    R EE+ Q++ A  + P   T+
Sbjct: 452 GKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAKNLEPDVVTW 508



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/359 (25%), Positives = 155/359 (43%), Gaps = 5/359 (1%)

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAG--KPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
           W M +S   P    YN L+  YG     K  ES   L+L+  E +  P   TY +L++A+
Sbjct: 144 WIMNKSTFRPDVIVYNLLMDAYGQRSLYKDVEST-YLELL--ESHCIPTEDTYALLLKAY 200

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C    + +A  V  +M   G+ P  + YN       + G   +A E+   M+ +G QP  
Sbjct: 201 CKSGLLEKAEAVFAEMRKYGLSPSAIVYNAYIDGLVKGGNNVKAVEIFHRMKRDGCQPTT 260

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T  ++I+ Y KE K   A      M+     PN+  F  L+         +  +E+   
Sbjct: 261 DTYTMLINVYGKESKSHMAQNIFDEMRTQRCKPNICTFTALVNALAREGLCEKAEEIFEQ 320

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M+E    PDV  Y+ +M ++S AGF     EIF  M   G +PD  +Y+I+   Y R   
Sbjct: 321 MQEAGYEPDVYAYNALMESYSRAGFPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 380

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            E A+ +   M   G  P +     ++S + S G++ +  ++  +M + G+ P+     +
Sbjct: 381 HEDAQAVFEEMKRIGITPTMKSHMLLLSAYSSAGNVAKCEDIIGQMHKSGLKPDTFVMNS 440

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           ++  Y    Q  + E++   M+        ST+ +L       G  +  + +   +  K
Sbjct: 441 MLNLYGRLGQFGKMEDLFSTMQKGPCRADISTYNILINVYGRAGFVERMEELFQLLPAK 499


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 199/378 (52%), Gaps = 17/378 (4%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD--PDSIFFN 146
           ++A+ +F+ L+  G  P + +Y  LL  L  + R      ++  + ++G D  PD + ++
Sbjct: 34  EDARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            VIN F + G+++       KM +  ++P   TYN++I     A   ++++++L  M + 
Sbjct: 93  TVINGFFKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G V P+  TYN +V  +C+     EA   + KM + G++PDVVTYN++     +NG   +
Sbjct: 146 G-VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTE 204

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A ++   M   G++P+  T G ++ GY  +G + E       M   G+HPN  +F++L+ 
Sbjct: 205 ARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVC 264

Query: 327 GFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
            + +   ++ V+E + +  + R   +NP+ +TY T+++    +G ++     F+ M   G
Sbjct: 265 AYAK---QEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEG 321

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           ++PD+  Y+ L        + EKAEEL + M++ G   + + F +II   C +G +  + 
Sbjct: 322 LRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESG 381

Query: 444 EVFDKMCEHGVSPNLKTF 461
           ++FD M   GV P++ T 
Sbjct: 382 KLFDLMVRIGVKPDIITL 399



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 111/492 (22%), Positives = 234/492 (47%), Gaps = 31/492 (6%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + ++N   + G         + +++    P++VTY +++AAL   +  +    +++
Sbjct: 88  VVSYSTVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLT 140

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + ++G+ PD + +N++++ F  SG  +EA+    KM+  G+ P   TYN+L+      G
Sbjct: 141 TMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG 200

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G +KP++ TY  L++ +  +  + E   ++  M  +G+ P+   +
Sbjct: 201 RCTEARKIFDSMTKRG-LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 259

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  AYA+  + ++A  V  +M   G+ PN  T G +I   CK G++++A+ +   M +
Sbjct: 260 SILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMID 319

Query: 312 YGVHPNLVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            G+ P+ +++N LI     I D+ +  +E+   M +  +    I +++I+++    G + 
Sbjct: 320 EGLRPDSIVYNSLIHSLC-IFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVI 378

Query: 371 KCKEIFDDMGKAGIKPDA-----------HAYSILAKGYV----------REQEPEKAEE 409
           +  ++FD M + G+KPD              YS+    Y           +E+E      
Sbjct: 379 ESGKLFDLMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTN 438

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
              T   S   P +  +  I+ G C +   D A+ +F  +C   +    +TF  ++    
Sbjct: 439 GGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALL 498

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEME 529
           +  +   A+++     + G+ P   T+ L+AE     GL +E  ++   +++   T +  
Sbjct: 499 KVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSG 558

Query: 530 AEEDIPVESLER 541
               I  E L+R
Sbjct: 559 MLNFIVRELLQR 570



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 90/332 (27%), Positives = 174/332 (52%), Gaps = 9/332 (2%)

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG-NVKPNLRTYN 217
           E+A   F ++   G+ P   +YN L+ G     + +E+++LL +M+ +G +  P++ +Y+
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++  +  E +       + KM    + P+VVTYN+I  A  +    D+A EV+  M  +
Sbjct: 93  TVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           GV P+  T   I+ G+C  G+ KEA+ F + M+  GV P++V +N L+    +       
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            ++   M +  + PD+ TY T++  ++T G + +   + D M + GI P+ + +SIL   
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           Y ++++ E+A  +   M + G +PN V + T+I   C  G ++ A+  F++M + G+ P+
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
              + +L+       +  +AEE+   M   G+
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEMLDRGI 357



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 93/402 (23%), Positives = 190/402 (47%), Gaps = 16/402 (3%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESG--LTPTTSTYNTLIKGYGIAGKPEESV 197
           PD   +N ++N   +    +EA++    M + G    P   +Y+T+I G+   G  +   
Sbjct: 49  PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLD--- 105

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+LD       + PN+ TYN ++ A C  + + +A  V+  M  SG+ PD +TYN+I   
Sbjct: 106 KMLD-----QRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHG 160

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           +  +G+  +A   + +M  +GV+P+  T   ++   CK G+  EA +   +M + G+ P+
Sbjct: 161 FCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPD 220

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  +  L++G+        +  +L LM    ++P+   +S ++ A++    +++   +F 
Sbjct: 221 ITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFS 280

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + G+ P+A  Y  +     +    E A      MI+ G  P+ +++ ++I   C   
Sbjct: 281 KMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFD 340

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF- 496
             ++A E+F +M + G+  +   F +++  + +  +   + ++  +M   GV P   T  
Sbjct: 341 KWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLG 400

Query: 497 LLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVES 538
             L  ARR   L      I + +     +N  + E++ PV +
Sbjct: 401 RFLGSARRDYSLFVNIYFIFTNM-----SNTGDKEKETPVNT 437



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 73/260 (28%), Positives = 132/260 (50%), Gaps = 10/260 (3%)

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG--VHPNLVIFN 322
           + A  V  E+   G+ P+  +  I+++G C E + +EAL     M + G    P++V ++
Sbjct: 34  EDARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            +I GF +  D D        M + R++P+V+TY++I+ A   A  +DK  E+   M K+
Sbjct: 93  TVINGFFKEGDLDK-------MLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ PD   Y+ +  G+    +P++A   L  M   G  P+VV + +++   C +G    A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            ++FD M + G+ P++ T+ TL+ GY+          +L +M   G+HP    F +L  A
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 503 RRATGLTKEAKRILSKIKNK 522
                  +EA  + SK++ +
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQ 285


>gi|449530367|ref|XP_004172167.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like, partial [Cucumis sativus]
          Length = 564

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/436 (26%), Positives = 213/436 (48%), Gaps = 38/436 (8%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           + Y  ++ A   +   +   +++ ++EE G+D     ++ +++ ++  G+ ++ +  F +
Sbjct: 19  IIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVGDEDKCLLVFER 78

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
            KE GL P+  TY  LI  Y   GK  +++++   M   G +K N++TY++L+  +   K
Sbjct: 79  FKECGLNPSVITYGCLINLYAKLGKVSKALEVSKEMEHAG-IKHNMKTYSMLINGFLKLK 137

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           +   A+ +   +   G+KPDVV YN I TA+   G+ D+A   + EM+    +P  RT  
Sbjct: 138 DWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFM 197

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
            II G+ ++G++K+AL     M+  G  P +  +N LI G VE    +  +++L  M   
Sbjct: 198 PIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLA 257

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA----------------- 390
            V+P+  TY+TIM+ +++ G   K    F  +   G++ D +                  
Sbjct: 258 GVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSA 317

Query: 391 ------------------YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
                             Y+IL  G+ R  +  +A +L+  M   G  P++  +T+ I+ 
Sbjct: 318 LAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINA 377

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
               G M RA +  ++M   GV PN+KT+ TL+ G++ A  P +A    + MK  G+ P 
Sbjct: 378 CSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPD 437

Query: 493 KSTF--LLLAEARRAT 506
           ++ +  L+ +   RAT
Sbjct: 438 RAVYHCLMTSLLSRAT 453



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 183/362 (50%), Gaps = 1/362 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   + GK  +A  +   +   G K ++ TY+ L+      K + +  +I   + ++G
Sbjct: 94  LINLYAKLGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDG 153

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +N +I AF   G M+ A+ T  +M++    PTT T+  +I G+   G+ ++++
Sbjct: 154 IKPDVVLYNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKAL 213

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            + D+M   G + P + TYN L+     ++ + +A  ++ +M  +G+ P+  TY TI   
Sbjct: 214 DVFDMMRMSGCI-PTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHG 272

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           YA  G+  +A     ++   G+Q +  T   ++   CK G+++ AL   + M    +  N
Sbjct: 273 YASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRN 332

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             I+N+LI G+    D     +++  MK   V PD+ TY++ +NA S AG M +  +  +
Sbjct: 333 TFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIE 392

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G+KP+   Y+ L  G+ R   PEKA      M  SG  P+  ++  +++   S  
Sbjct: 393 EMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMKLSGLKPDRAVYHCLMTSLLSRA 452

Query: 438 SM 439
           ++
Sbjct: 453 TV 454



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 159/323 (49%), Gaps = 1/323 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +++ + L+N  ++      A AIF +LI+ G KP +V Y  ++ A     + +     + 
Sbjct: 123 MKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVLYNNIITAFCGMGKMDRAVCTVK 182

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++++    P +  F  +I+ F+  G M++A+D F  M+ SG  PT  TYN LI G     
Sbjct: 183 EMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKR 242

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K E++ ++LD M+  G V PN  TY  ++  + +  +  +A+    K+   G++ DV TY
Sbjct: 243 KMEKAEQILDEMTLAG-VSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTY 301

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +  A  ++G    A  V  EM    +  N     I+I G+ + G + EA    + MK 
Sbjct: 302 EALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILIDGWARRGDVWEAADLMQQMKR 361

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV P++  +   I    +  D     + +  MK   V P+V TY+T++N W+ A   +K
Sbjct: 362 EGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEK 421

Query: 372 CKEIFDDMGKAGIKPDAHAYSIL 394
               F++M  +G+KPD   Y  L
Sbjct: 422 ALSCFEEMKLSGLKPDRAVYHCL 444



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 101/416 (24%), Positives = 181/416 (43%), Gaps = 71/416 (17%)

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           ++I +  +I A+ +  NM++A     +M+E G+      Y+T++ GY + G  +E   LL
Sbjct: 17  NAIIYGNIIYAYCQRCNMDKAEALVREMEEEGIDAPIDIYHTMMDGYTMVG--DEDKCLL 74

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
                                             V  +    G+ P V+TY  +   YA+
Sbjct: 75  ----------------------------------VFERFKECGLNPSVITYGCLINLYAK 100

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
            G+  +A EV  EMEH G++ N +T  ++I+G+ K      A      + + G+ P++V+
Sbjct: 101 LGKVSKALEVSKEMEHAGIKHNMKTYSMLINGFLKLKDWANAFAIFEDLIKDGIKPDVVL 160

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           +N +I  F  +   D     +  M++ R  P   T+  I++ ++  G M K  ++FD M 
Sbjct: 161 YNNIITAFCGMGKMDRAVCTVKEMQKQRHKPTTRTFMPIIHGFARKGEMKKALDVFDMMR 220

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
            +G  P  H Y+ L  G V +++ EKAE++L  M  +G  PN   +TTI+ G+ S G   
Sbjct: 221 MSGCIPTVHTYNALILGLVEKRKMEKAEQILDEMTLAGVSPNEHTYTTIMHGYASLGDTG 280

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMW---------------------------------- 466
           +A   F K+ + G+  ++ T+E L+                                   
Sbjct: 281 KAFAYFTKLRDEGLQLDVYTYEALLKACCKSGRMQSALAVTKEMSAQNIPRNTFIYNILI 340

Query: 467 -GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            G++     W A +++Q MK  GV P   T+     A    G  + A + + ++K+
Sbjct: 341 DGWARRGDVWEAADLMQQMKREGVQPDIHTYTSFINACSKAGDMQRATKTIEEMKS 396



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 136/259 (52%), Gaps = 1/259 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T R+   +++    +G+ ++A  +F+ +   G  P++ TY  L+  L  +++      I+
Sbjct: 192 TTRTFMPIIHGFARKGEMKKALDVFDMMRMSGCIPTVHTYNALILGLVEKRKMEKAEQIL 251

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+ P+   +  +++ ++  G+  +A   F K+++ GL     TY  L+K    +
Sbjct: 252 DEMTLAGVSPNEHTYTTIMHGYASLGDTGKAFAYFTKLRDEGLQLDVYTYEALLKACCKS 311

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ + ++ +   MS + N+  N   YN+L+  W    ++ EA ++M +M   G++PD+ T
Sbjct: 312 GRMQSALAVTKEMSAQ-NIPRNTFIYNILIDGWARRGDVWEAADLMQQMKREGVQPDIHT 370

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y +   A ++ G+  +A + I EM+  GV+PN +T   +I+G+ +    ++AL     MK
Sbjct: 371 YTSFINACSKAGDMQRATKTIEEMKSVGVKPNVKTYTTLINGWARASLPEKALSCFEEMK 430

Query: 311 EYGVHPNLVIFNLLIKGFV 329
             G+ P+  +++ L+   +
Sbjct: 431 LSGLKPDRAVYHCLMTSLL 449


>gi|22128587|gb|AAM52339.1| fertility restorer [Petunia x hybrida]
          Length = 592

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 208/424 (49%), Gaps = 8/424 (1%)

Query: 108 VTYTTLLAALTIQKRF-NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFW 166
           VT+TTL+  L  + +  +++H     V EN  +PD + +  V++   + G+ ++A D   
Sbjct: 143 VTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLR 202

Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
            M++    P T  YN +I  +   G  + +  LL+ M ++ N+ P++ TY  L+      
Sbjct: 203 LMEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEM-KQKNIPPDIITYTSLIDGLGKL 261

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
               +   +  +M    + PDV T+N++     + G+ + AEE++  M   GV+PN  T 
Sbjct: 262 SQWEKVRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITY 321

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
            +++ GYC  G++  A R   +M + G+ P+++ +  LI G+VE   +  +D+ + L +E
Sbjct: 322 NVVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVE---KKKMDKAMQLFRE 378

Query: 347 FRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
              N   P ++T S ++      G  +  K  FD+M  AG  P+ + +  L  GY +   
Sbjct: 379 ISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGL 438

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            E+A      +       N+ I+T +I+G C +G +D+A   F+K+   G+ P++ T+  
Sbjct: 439 VEEAMSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTA 498

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           ++ GY +      A+++L+ M+  G  P   T+ ++      +    E K  L +I  K 
Sbjct: 499 MISGYCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKS 558

Query: 524 RTNE 527
            + E
Sbjct: 559 FSFE 562



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/415 (24%), Positives = 209/415 (50%), Gaps = 9/415 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           + T L+  L    K ++A  +F  L+ E   +P  V Y T++  L  +        ++  
Sbjct: 144 TFTTLIRGLFAENKVKDAVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRL 203

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +E+    PD+  +N VI+AF + G ++ A     +MK+  + P   TY +LI G G   +
Sbjct: 204 MEQGITKPDTCIYNIVIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQ 263

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            E+ V+ L L     N+ P++ T+N ++   C E  + +A  +M  M   G++P+ +TYN
Sbjct: 264 WEK-VRTLFLEMIHLNIYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYN 322

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +   Y   G+  +A  +   M   G++P+  +   +I+GY ++ K+ +A++  R + + 
Sbjct: 323 VVMDGYCLRGQMGRARRIFDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQN 382

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ P++V  ++L++G  E+   +        M+     P++ T+ T++  +   G +++ 
Sbjct: 383 GLKPSIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEA 442

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
              F  + +     +   Y+ +  G  +  + +KA      +   G HP+V+ +T +ISG
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +C +G +D A ++  KM ++G  P+ +T+  ++ G+      +R+ ++ + MKAF
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLPDNRTYNVIVRGF------FRSSKVSE-MKAF 550



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 107/470 (22%), Positives = 221/470 (47%), Gaps = 39/470 (8%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            +A ++F  ++     PS V+++ LL AL   K ++S+ SI  ++ +  +  D+   + V
Sbjct: 54  DDAFSLFRQMVTTKPLPSAVSFSKLLKALVHMKHYSSVVSIFREIHKLRIPVDAFALSTV 113

Query: 149 INA------------------------------------FSESGNMEEAMDTFWKM-KES 171
           +N+                                    F+E+  +++A+  F K+ +E+
Sbjct: 114 VNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAEN-KVKDAVHLFKKLVREN 172

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE 231
              P    Y T++ G    G  +++  LL LM  +G  KP+   YN+++ A+C +  +  
Sbjct: 173 ICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLM-EQGITKPDTCIYNIVIDAFCKDGMLDG 231

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           A +++++M    + PD++TY ++     +  + ++   + +EM H  + P+  T   +I 
Sbjct: 232 ATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIYPDVCTFNSVID 291

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
           G CKEGK+++A      M E GV PN + +N+++ G+           +   M +  + P
Sbjct: 292 GLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFDSMIDKGIEP 351

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           D+I+Y+ ++N +     MDK  ++F ++ + G+KP     S+L +G       E A+   
Sbjct: 352 DIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVGRTECAKIFF 411

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M  +G  PN+    T++ G+  +G ++ A+  F K+       N++ +  ++ G  + 
Sbjct: 412 DEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVINGLCKN 471

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            +  +A    + +   G+HP   T+  +       GL  EAK +L K+++
Sbjct: 472 GKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMED 521



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 77/334 (23%), Positives = 167/334 (50%), Gaps = 1/334 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++  + G    A ++ N + +    P ++TYT+L+  L    ++  + ++  ++    
Sbjct: 219 VIDAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLN 278

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   FN+VI+   + G +E+A +    M E G+ P   TYN ++ GY + G+   + 
Sbjct: 279 IYPDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRAR 338

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++ D M  +G ++P++ +Y  L+  +  +K + +A  +  +++ +G+KP +VT + +   
Sbjct: 339 RIFDSMIDKG-IEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRG 397

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G  + A+    EM+  G  PN  T   ++ GY K G ++EA+     ++      N
Sbjct: 398 LFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTN 457

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           + I+  +I G  +    D        +    ++PDVITY+ +++ +   G +D+ K++  
Sbjct: 458 IQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLR 517

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
            M   G  PD   Y+++ +G+ R  +  + +  L
Sbjct: 518 KMEDNGCLPDNRTYNVIVRGFFRSSKVSEMKAFL 551



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 181/390 (46%), Gaps = 11/390 (2%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            V N F     +++A   F +M  +   P+  +++ L+K   +  K   SV  +     +
Sbjct: 42  GVSNEFENVKCLDDAFSLFRQMVTTKPLPSAVSFSKLLKAL-VHMKHYSSVVSIFREIHK 100

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT-IATAYAQNGEAD 265
             +  +    + +V + C        ++V+      G+  + VT+ T I   +A+N   D
Sbjct: 101 LRIPVDAFALSTVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKD 160

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
                   +  N  +P+    G ++ G CK+G  ++A    R M++    P+  I+N++I
Sbjct: 161 AVHLFKKLVRENICEPDEVMYGTVMDGLCKKGHTQKAFDLLRLMEQGITKPDTCIYNIVI 220

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
             F +    DG   +L  MK+  + PD+ITY+++++        +K + +F +M    I 
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKNIPPDIITYTSLIDGLGKLSQWEKVRTLFLEMIHLNIY 280

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   ++ +  G  +E + E AEE++  MIE G  PN + +  ++ G+C  G M RA  +
Sbjct: 281 PDVCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRI 340

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           FD M + G+ P++ ++  L+ GY E ++  +A ++ + +   G+ P   T  +L      
Sbjct: 341 FDSMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFE 400

Query: 506 TGLTKEAKRILSKIKNKERTNEMEAEEDIP 535
            G T+ AK            +EM+A   IP
Sbjct: 401 VGRTECAKIFF---------DEMQAAGHIP 421



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 141/275 (51%), Gaps = 4/275 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++ L + GK ++A+ I   +IE G +P+ +TY  ++    ++ +      I  
Sbjct: 283 VCTFNSVIDGLCKEGKVEDAEEIMTYMIEKGVEPNEITYNVVMDGYCLRGQMGRARRIFD 342

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G++PD I + A+IN + E   M++AM  F ++ ++GL P+  T + L++G    G
Sbjct: 343 SMIDKGIEPDIISYTALINGYVEKKKMDKAMQLFREISQNGLKPSIVTCSVLLRGLFEVG 402

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E +    D M   G++ PNL T+  L+  +     + EA +  HK+       ++  Y
Sbjct: 403 RTECAKIFFDEMQAAGHI-PNLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIY 461

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     +NG+ D+A     ++   G+ P+  T   +ISGYC+EG + EA    R M++
Sbjct: 462 TAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMED 521

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
            G  P+   +N++++GF        V E+ A +KE
Sbjct: 522 NGCLPDNRTYNVIVRGFFR---SSKVSEMKAFLKE 553



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 51/191 (26%), Positives = 90/191 (47%), Gaps = 1/191 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ + + L+  L E G+ + A+  F+ +   GH P+L T+ TLL             S  
Sbjct: 387 SIVTCSVLLRGLFEVGRTECAKIFFDEMQAAGHIPNLYTHCTLLGGYFKNGLVEEAMSHF 446

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++E    D +   + AVIN   ++G +++A  TF K+   GL P   TY  +I GY   
Sbjct: 447 HKLERRREDTNIQIYTAVINGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE 506

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +E+  +L  M   G + P+ RTYNV+VR +     ++E    + ++A      +  T
Sbjct: 507 GLLDEAKDMLRKMEDNGCL-PDNRTYNVIVRGFFRSSKVSEMKAFLKEIAGKSFSFEAAT 565

Query: 251 YNTIATAYAQN 261
              +    A++
Sbjct: 566 VELLMDIIAED 576


>gi|297823811|ref|XP_002879788.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325627|gb|EFH56047.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 867

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/484 (24%), Positives = 235/484 (48%), Gaps = 34/484 (7%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T ++ + ++ G  +EA  + + ++  G   S++  T+L+                +++EE
Sbjct: 314 TSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVIAATSLITGFCNGNELGKALDFFNRMEE 373

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ PD + F+ +I  F ++  ME+A++ + +MK  G+ P++   + +I+G   A  PE 
Sbjct: 374 EGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRMKSVGIAPSSVLVHKMIQGCLKAESPEA 433

Query: 196 SVKLLD------------------LMSREGNV---------------KPNLRTYNVLVRA 222
           ++++ +                  L+ ++G V               +PN+  YN ++ A
Sbjct: 434 ALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLA 493

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C  KN+  A ++  +M   G++P+  TY+ +   + +N +   A EVI +M  +  + N
Sbjct: 494 HCRMKNMDLARSIFSEMLEKGLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEAN 553

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
                 II+G CK G+  +A    + + KE         +N +I GF +  D D   E  
Sbjct: 554 EVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAY 613

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M E  ++P+V+T+++++N +  +  MD   E+  +M    +K D  AY  L  G+ ++
Sbjct: 614 REMSENGISPNVVTFTSLINGFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKK 673

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            + + A  L   ++E G  PNV ++  +ISG+ + G MD AI+++ KM   G+S +L T+
Sbjct: 674 NDMKTAYTLFSELLELGLMPNVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTY 733

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            T++ G  +      A ++   + A G+ P +  +++L       G    A ++L ++K 
Sbjct: 734 TTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKK 793

Query: 522 KERT 525
           K+ T
Sbjct: 794 KDAT 797



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/394 (24%), Positives = 198/394 (50%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           K+   L ++GK   A +    +   G +P++V Y  ++ A    K  +   SI S++ E 
Sbjct: 454 KIFLLLCKQGKVDAATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEK 513

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G+ P++  ++ +I+ F ++ + + A +   +M  S        YNT+I G    G+  ++
Sbjct: 514 GLQPNNFTYSILIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKA 573

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            ++L  + +E        +YN ++  +  E +   A     +M+ +G+ P+VVT+ ++  
Sbjct: 574 KEMLQNLIKEKRYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLIN 633

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            + ++   D A E+I EM+   ++ +    G +I G+CK+  +K A      + E G+ P
Sbjct: 634 GFCKSNRMDLALEMIHEMKSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMP 693

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N+ ++N LI GF  +   D   ++   M    ++ D+ TY+T+++     G +    +++
Sbjct: 694 NVSVYNNLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLY 753

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            ++   GI PD   Y +L  G  ++ +  +A ++L  M +    PNV+I++T+I+G   +
Sbjct: 754 SELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHRE 813

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           G+++ A  V D+M E G+  +   F  L+ G  E
Sbjct: 814 GNLNEAFRVHDEMLEKGLVHDDTIFNLLVSGRVE 847



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 114/487 (23%), Positives = 211/487 (43%), Gaps = 76/487 (15%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+   L+N+ I   +   A   FN +++    P +     +L++L      +    I ++
Sbjct: 170 RAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYNK 229

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +   G+  D++    ++ A       EEAM  F ++   G  P    ++  ++    A K
Sbjct: 230 MVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQA---ACK 286

Query: 193 PEESVKLLDL---MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            ++ V  LDL   M  +G V  +  TY  ++ A   E N+ EA  V  +M   G+   V+
Sbjct: 287 MKDLVMALDLLREMREKGGVPASQETYTSVIVACVKEGNMEEAVKVKDEMVGFGIPMSVI 346

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
              ++ T +    E  +A +    ME  G+ P+     ++I  +CK  ++++A+   + M
Sbjct: 347 AATSLITGFCNGNELGKALDFFNRMEEEGLAPDKVMFSVMIEWFCKNMEMEKAVEIYKRM 406

Query: 310 KEYGVHPNLVIFNLLIKGF---------VEIMDR-------------------------D 335
           K  G+ P+ V+ + +I+G          +EI +                          D
Sbjct: 407 KSVGIAPSSVLVHKMIQGCLKAESPEAALEIFNDSFETWIAHGFMCNKIFLLLCKQGKVD 466

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
                L +M+   + P+V+ Y+ +M A      MD  + IF +M + G++P+   YSIL 
Sbjct: 467 AATSFLRMMENKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLQPNNFTYSILI 526

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC--------------------- 434
            G+ + Q+ + A E++  MI S F  N VI+ TII+G C                     
Sbjct: 527 DGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRY 586

Query: 435 ---------------SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
                           +G  D A+E + +M E+G+SPN+ TF +L+ G+ ++ +   A E
Sbjct: 587 SMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLALE 646

Query: 480 ILQIMKA 486
           ++  MK+
Sbjct: 647 MIHEMKS 653



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 68/332 (20%), Positives = 167/332 (50%), Gaps = 3/332 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIMSQVEEN 136
           L++   +    Q A  + N +I    + + V Y T++  L  + +   +   + + ++E 
Sbjct: 525 LIDGFFKNQDEQNAWEVINQMIASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIKEK 584

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
                   +N++I+ F + G+ + A++ + +M E+G++P   T+ +LI G+  + + + +
Sbjct: 585 RYSMGCTSYNSIIDGFFKEGDTDSAVEAYREMSENGISPNVVTFTSLINGFCKSNRMDLA 644

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++++  M +  ++K ++  Y  L+  +C + ++  A+ +  ++   G+ P+V  YN + +
Sbjct: 645 LEMIHEM-KSKDLKLDVPAYGALIDGFCKKNDMKTAYTLFSELLELGLMPNVSVYNNLIS 703

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            +   G+ D A ++  +M ++G+  +  T   +I G  K+G +  A      +   G+ P
Sbjct: 704 GFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNLILASDLYSELLALGIVP 763

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           + +++ +L+ G  +        ++L  MK+    P+V+ YST++      G +++   + 
Sbjct: 764 DEILYVVLVNGLSKKGQFVRASKMLEEMKKKDATPNVLIYSTVIAGHHREGNLNEAFRVH 823

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           D+M + G+  D   +++L  G V E+ P  A+
Sbjct: 824 DEMLEKGLVHDDTIFNLLVSGRV-EKPPAAAK 854



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 31/131 (23%), Positives = 62/131 (47%), Gaps = 2/131 (1%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +++ L++ G    A  +++ L+  G  P  + Y  L+  L+ + +F     ++ ++++
Sbjct: 734 TTMIDGLLKDGNLILASDLYSELLALGIVPDEILYVVLVNGLSKKGQFVRASKMLEEMKK 793

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
               P+ + ++ VI      GN+ EA     +M E GL    + +N L+ G     KP  
Sbjct: 794 KDATPNVLIYSTVIAGHHREGNLNEAFRVHDEMLEKGLVHDDTIFNLLVSGR--VEKPPA 851

Query: 196 SVKLLDLMSRE 206
           + K+  L S E
Sbjct: 852 AAKISSLASPE 862



 Score = 46.2 bits (108), Expect = 0.059,   Method: Compositional matrix adjust.
 Identities = 28/115 (24%), Positives = 52/115 (45%)

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
           + A++ L   Y+R +  + A +    M++    P V     ++S       +D A E+++
Sbjct: 169 SRAFNYLLNAYIRNRRMDYAVDCFNLMVDRNVVPFVPYVNNVLSSLVRSNLIDEAKEIYN 228

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           KM   GV+ +  T + LM      R+P  A +I + + + G  P    F L  +A
Sbjct: 229 KMVLIGVAGDNVTTQLLMRASLRERKPEEAMKIFRRVMSRGAEPDGLLFSLAVQA 283


>gi|242038895|ref|XP_002466842.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
 gi|241920696|gb|EER93840.1| hypothetical protein SORBIDRAFT_01g015050 [Sorghum bicolor]
          Length = 1090

 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/470 (24%), Positives = 215/470 (45%), Gaps = 45/470 (9%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +NK  C      T L++   + G+  +A+ I  +++E G  P +VTY+ L+  +    + 
Sbjct: 362 INKTMC------TILIDGFCQVGEISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKM 415

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    I+S+++++G+ P+ + +  +I  + ++G ++ A+  F  +   GL      +N L
Sbjct: 416 HETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNAL 475

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           ++ +   G   E+      MSR  N+  N  ++N ++ ++C+   I EA++V   M   G
Sbjct: 476 LRAFYREGMITEAEHFRQYMSRM-NISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYG 534

Query: 244 MKPDVVTYNTIATAYAQNGEA-----------------------------------DQAE 268
             P+V TY  +     Q G                                     D+A 
Sbjct: 535 HSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEAL 594

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           ++  +M  N   P+  T  I++SG+C++GKI  AL   + M E GV P+ V +  L+ G 
Sbjct: 595 DICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGL 654

Query: 329 VEIMDRDGVDEVL--ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           +          V    + KE  +  D I Y+++MN +   G ++  K +  DM +  + P
Sbjct: 655 INEGQVKAASYVFQEIICKE-GLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMYQNEVYP 713

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           ++ +Y+IL  GYV+  +  K+  L   M+  G  P+ V +  +I G    G +D A++  
Sbjct: 714 NSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDIAVKFL 773

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           +KM   G+ P+   F+ L+  +SE  +   A  +   MK   + P   TF
Sbjct: 774 EKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTF 823



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/431 (25%), Positives = 211/431 (48%), Gaps = 4/431 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+NSL   G+ ++A+ +   +       S  TY T+L     + RF +   ++  +E + 
Sbjct: 161 LLNSLCTNGEFRKAEDMLQKMKSCCLSNS-ATYNTILHWYVKKGRFKAALCVLEDMERDS 219

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   +N +I+          A     +M++  LTP   TYNTLI G+   GK   + 
Sbjct: 220 IQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLINGFFGEGKINHAR 279

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            + + M R+  V P++ TY  ++  +C  + I +A +V+ +M  +G+ P  +TY+ +   
Sbjct: 280 CVFNHMLRQTLV-PSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVMPSELTYSALLNG 338

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y +      A +++V+++  G+  N   C I+I G+C+ G+I +A +  ++M E G+ P+
Sbjct: 339 YCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVGEISKAKQILKSMLEDGIDPD 398

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V ++ LI G   +       E+L+ M++  + P+ + Y+T++  +  AG++    + F 
Sbjct: 399 VVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKVALKHFV 458

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           D+ + G+  +   ++ L + + RE    +AE     M       N V F  II  +C  G
Sbjct: 459 DIYRRGLVANPVIHNALLRAFYREGMITEAEHFRQYMSRMNISFNSVSFNCIIDSYCHRG 518

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF- 496
            +  A  V+D M  +G SPN+ T++ L+ G  +     +A++ +  +        + TF 
Sbjct: 519 KIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLDIPSAVDEKTFN 578

Query: 497 -LLLAEARRAT 506
            LLL   +  T
Sbjct: 579 ALLLGICKYGT 589



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 104/480 (21%), Positives = 214/480 (44%), Gaps = 44/480 (9%)

Query: 83  IERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS 142
           +++G+ + A  +  ++     +  + TY  ++  L   KR      ++ ++ ++ + PD 
Sbjct: 200 VKKGRFKAALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDE 259

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
             +N +IN F   G +  A   F  M    L P+ +TY T+I GY    + ++++ +L  
Sbjct: 260 CTYNTLINGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSE 319

Query: 203 MSREGNVKPNLRTYN-----------------------------------VLVRAWCNEK 227
           M   G V P+  TY+                                   +L+  +C   
Sbjct: 320 MEITG-VMPSELTYSALLNGYCKVSMLGPALDLMVDLKSRGITINKTMCTILIDGFCQVG 378

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
            I++A  ++  M   G+ PDVVTY+ +     +  +  + +E++  M+ +G+ PN     
Sbjct: 379 EISKAKQILKSMLEDGIDPDVVTYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYT 438

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV----DEVLAL 343
            +I  YCK G +K AL+    +   G+  N VI N L++ F     R+G+    +     
Sbjct: 439 TLICYYCKAGYVKVALKHFVDIYRRGLVANPVIHNALLRAFY----REGMITEAEHFRQY 494

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M    ++ + ++++ I++++   G + +   ++DDM + G  P+   Y  L +G  +   
Sbjct: 495 MSRMNISFNSVSFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGH 554

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
             +A++ +  +++     +   F  ++ G C  G++D A+++ +KM ++   P++ T+  
Sbjct: 555 LVQAKQFMFCLLDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTI 614

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           L+ G+    +   A  +LQ+M   GV P    +  L       G  K A  +  +I  KE
Sbjct: 615 LLSGFCRKGKILPALVMLQMMLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKE 674



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 105/451 (23%), Positives = 209/451 (46%), Gaps = 2/451 (0%)

Query: 73   RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
            ++   L+  + + G   EA  I   +++    P + TYT LL+    + +      ++  
Sbjct: 575  KTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKILPALVMLQM 634

Query: 133  VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK-ESGLTPTTSTYNTLIKGYGIAG 191
            + E G+ PD++ +  ++N     G ++ A   F ++  + GL      YN+L+ GY   G
Sbjct: 635  MLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGG 694

Query: 192  KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
                  +++  M  +  V PN  +YN+L+  +      +++  +   M   G++PD VTY
Sbjct: 695  NVNTIKRMMSDMY-QNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTY 753

Query: 252  NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
              +    ++ G  D A + + +M   G+ P+     I+I+ + ++ K+  ALR    MK 
Sbjct: 754  RLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNALRLFNCMKC 813

Query: 312  YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
              + P+   F+ +I G +     D   EVL  M +  + P+   Y  ++NA    G +D+
Sbjct: 814  LHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDR 873

Query: 372  CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
               + ++M   GI P   A S + +G  R  + E+A  +   M+ SG  P V  FTT++ 
Sbjct: 874  AFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMH 933

Query: 432  GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
              C +  +  A+ +   M    +  ++ ++  L+ G  + +    A ++   MK+ G+ P
Sbjct: 934  SLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWP 993

Query: 492  QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              +T++ L  A  +TG  +  + +L  I+ +
Sbjct: 994  NVTTYITLTGAMYSTGRMQNGEELLEDIEER 1024



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/524 (21%), Positives = 207/524 (39%), Gaps = 107/524 (20%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
            S   +++S   RGK  EA +++++++  GH P++ TY  LL  L            M  +
Sbjct: 506  SFNCIIDSYCHRGKIVEAFSVYDDMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCL 565

Query: 134  EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +     D   FNA++    + G ++EA+D   KM ++   P   TY  L+ G+   GK 
Sbjct: 566  LDIPSAVDEKTFNALLLGICKYGTLDEALDICEKMVKNNCLPDIHTYTILLSGFCRKGKI 625

Query: 194  EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYN 252
              ++ +L +M  +G V P+   Y  L+    NE  +  A  V  ++    G+  D + YN
Sbjct: 626  LPALVMLQMMLEKG-VVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYN 684

Query: 253  TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK-------------- 298
            ++   Y + G  +  + ++ +M  N V PN  +  I++ GY K G+              
Sbjct: 685  SLMNGYLKGGNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRK 744

Query: 299  ---------------------IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
                                 I  A++F   M   G+ P+ ++F++LI  F E       
Sbjct: 745  GIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDKLVFDILITSFSEKSKMHNA 804

Query: 338  DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY------ 391
              +   MK   ++P   T+S ++N      ++D+  E+  +M + G++P+   Y      
Sbjct: 805  LRLFNCMKCLHLSPSSKTFSAMINGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNA 864

Query: 392  -----------------------------SILAKGYVREQEPEKAEELLMTMIESGFHPN 422
                                         S + +G  R  + E+A  +   M+ SG  P 
Sbjct: 865  KCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPT 924

Query: 423  VVIFTTI-----------------------------------ISGWCSDGSMDRAIEVFD 447
            V  FTT+                                   I+G C D  +  A++++ 
Sbjct: 925  VATFTTLMHSLCKESKIADALHLKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYG 984

Query: 448  KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            +M   G+ PN+ T+ TL        +    EE+L+ ++  G+ P
Sbjct: 985  EMKSKGLWPNVTTYITLTGAMYSTGRMQNGEELLEDIEERGLIP 1028



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/390 (24%), Positives = 177/390 (45%), Gaps = 2/390 (0%)

Query: 76   TKLMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
            T L+N LI  G+ + A  +F  +I + G     + Y +L+         N+I  +MS + 
Sbjct: 648  TCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNVNTIKRMMSDMY 707

Query: 135  ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
            +N + P+S  +N +++ + + G   +++  +  M   G+ P   TY  LI G    G  +
Sbjct: 708  QNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLID 767

Query: 195  ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
             +VK L+ M  EG + P+   +++L+ ++  +  +  A  + + M    + P   T++ +
Sbjct: 768  IAVKFLEKMVLEG-IFPDKLVFDILITSFSEKSKMHNALRLFNCMKCLHLSPSSKTFSAM 826

Query: 255  ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                 +    DQ+ EV+ EM   G+QPN      +++  C+ G+I  A R    MK  G+
Sbjct: 827  INGLIRKNYLDQSHEVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGI 886

Query: 315  HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
             P  V  + +I+G       +    V + M    + P V T++T+M++      +     
Sbjct: 887  VPAEVAESSIIRGLCRCGKLEEAVIVFSNMMRSGMVPTVATFTTLMHSLCKESKIADALH 946

Query: 375  IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
            +   M    +K D  +Y++L  G  +++    A +L   M   G  PNV  + T+     
Sbjct: 947  LKRLMELCRLKVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNVTTYITLTGAMY 1006

Query: 435  SDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            S G M    E+ + + E G+ P  K  E L
Sbjct: 1007 STGRMQNGEELLEDIEERGLIPAFKQLENL 1036



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/366 (19%), Positives = 150/366 (40%), Gaps = 55/366 (15%)

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S VE +G+D  +  +   +    ++    +AM     +  +G +  T+ + +L++     
Sbjct: 22  SIVERSGLDRITYIYCMAVRILIQAQMHSQAMSVLKHLAVTGFS-CTAIFTSLLR----- 75

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
                      ++SR  +   N   + +L++A+  E+ + +A   +  M   G K   V 
Sbjct: 76  -----------IISRFDS--TNHVVFELLIKAYVKERKVLDAAVAVFFMDDCGFKASPVA 122

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            N+I  A  + GE+      + E        +  TC I+++  C  G+ ++A    + MK
Sbjct: 123 CNSILKALVEEGESKYVWLFLRESLARKFPLDVTTCNILLNSLCTNGEFRKAEDMLQKMK 182

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              +                                     +  TY+TI++ +   G   
Sbjct: 183 SCCL------------------------------------SNSATYNTILHWYVKKGRFK 206

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               + +DM +  I+ D + Y+I+     R +   +A  LL  M +    P+   + T+I
Sbjct: 207 AALCVLEDMERDSIQADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLTPDECTYNTLI 266

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+  +G ++ A  VF+ M    + P++ T+ T++ GY   R+  +A  +L  M+  GV 
Sbjct: 267 NGFFGEGKINHARCVFNHMLRQTLVPSVATYTTMIDGYCRNRRIDKALSVLSEMEITGVM 326

Query: 491 PQKSTF 496
           P + T+
Sbjct: 327 PSELTY 332


>gi|115475796|ref|NP_001061494.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|34015356|gb|AAQ56545.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015369|gb|AAQ56557.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|35215067|dbj|BAC92425.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113623463|dbj|BAF23408.1| Os08g0300700 [Oryza sativa Japonica Group]
 gi|215678779|dbj|BAG95216.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|258644436|dbj|BAI39696.1| putative fertility restorer [Oryza sativa Indica Group]
          Length = 735

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 191/392 (48%), Gaps = 3/392 (0%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           TYT LL  L          ++   +  +   PD+  +  +++   E+G  EEA     + 
Sbjct: 144 TYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN-VKPNLRTYNVLVRAWCNEK 227
             +G  P    YN LI GY  AG+ E ++K+ + M  +GN   PN+RTY  L+   C   
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGM--DGNRCSPNVRTYTELIHGLCKSG 261

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
            +  A  +  +M  +G++P+VVTY  +       G    A  ++  ME NG+ PN  T  
Sbjct: 262 KVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFS 321

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           ++I   CK  K++EA  F  ++ + GV  N V++  LI G  +    D  DE++  M   
Sbjct: 322 VLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE 381

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
              PD  +YS++++       + +   + +DM + GI+     Y+I+    VRE   E  
Sbjct: 382 GFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGP 441

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           +++   MI +G +P++V +T  +  +C +G M+ A  +  +M + GV PNL T+ TL+ G
Sbjct: 442 KKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           Y+      +A    ++M   G  P + ++ +L
Sbjct: 502 YANLGLVSQAFSTFEVMVGKGWKPNEDSYTVL 533



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 201/448 (44%), Gaps = 11/448 (2%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R +R+ T L+N+    G    A+    +L+  G  P    YT+ +              +
Sbjct: 70  RNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRV 129

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
              +   G    +  + A+++    +G + EAM  F  M+     P T  Y T++ G   
Sbjct: 130 FVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCE 189

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           AG+ EE+  LL+     G  +PN+  YN L+  +CN   +  A  V   M  +   P+V 
Sbjct: 190 AGRTEEAEVLLEEAMSNG-FEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVR 248

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +     ++G+ ++A  +   M   G++PN  T   +I G C EG ++ A R    M
Sbjct: 249 TYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLM 308

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM-----KEFRVNPDVITYSTIMNAWS 364
           +  G+ PN   F++LI    +   R+ V+E    +     K  +VN   + Y+++++   
Sbjct: 309 ETNGLVPNDWTFSVLIDALCK---REKVEEAQLFLGSLVKKGVKVNE--VVYTSLIDGLC 363

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G +D   E+   M   G  PDAH+YS L  G  R+++  +A  +L  M+E G   + V
Sbjct: 364 KTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPV 423

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +T II     +   +   ++FDKM   G++P++ T+   +  Y E  +   AE ++  M
Sbjct: 424 TYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQM 483

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEA 512
              GV P   T+  L       GL  +A
Sbjct: 484 VDRGVFPNLVTYNTLIRGYANLGLVSQA 511



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 206/470 (43%), Gaps = 48/470 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           VR+ T+L++ L + GK + A  +F+ ++E G +P++VTYT L+     +        ++ 
Sbjct: 247 VRTYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLH 306

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +E NG+ P+   F+ +I+A  +   +EEA      + + G+      Y +LI G    G
Sbjct: 307 LMETNGLVPNDWTFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTG 366

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW------------------ 233
           K + + +L+  M  EG V P+  +Y+ L+   C +K +++A                   
Sbjct: 367 KIDAADELMQKMISEGFV-PDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTY 425

Query: 234 -----------------NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
                             +  KM A+G+ PD+VTY     +Y + G  + AE +IV+M  
Sbjct: 426 TIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVD 485

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            GV PN  T   +I GY   G + +A      M   G  PN   + +L++  V+    D 
Sbjct: 486 RGVFPNLVTYNTLIRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDN 545

Query: 337 VDEV--LALMKEFRVNPDVIT----------YSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
             ++  +A MK+ +V  + IT          YS  +        +++ K  F  M  A +
Sbjct: 546 SVDIWKIADMKDLQVLLEDITERQLPLAADIYSCFIRCLCRVDRLEEAKHFFMGMQNANL 605

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P    Y+ +     R +    A  LL +M +SG+ P++  +  IIS  C  G+   A E
Sbjct: 606 TPSEDVYTSIIDCCCRLKILTDALTLLDSMTKSGYLPHLESYRIIISSLCEGGNFRTAKE 665

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
           VF  +     + +   ++ L++G  +         +L +MK  G  P  +
Sbjct: 666 VFGDLLLKESNYDEIVWKILIYGLLQKGSVAEFSSLLSVMKEHGYQPSNT 715



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 101/444 (22%), Positives = 196/444 (44%), Gaps = 43/444 (9%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           RT  + T L++ L+  G  +EA A+F  +      P    Y T++  L    R      +
Sbjct: 140 RTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVL 199

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + +   NG +P+ + +NA+I+ +  +G ME A+  F  M  +  +P   TY  LI G   
Sbjct: 200 LEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCK 259

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD-- 247
           +GK E ++ L   M  E  ++PN+ TY  L++  CNE ++  A+ ++H M  +G+ P+  
Sbjct: 260 SGKVERAMVLFSRMV-EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318

Query: 248 ---------------------------------VVTYNTIATAYAQNGEADQAEEVIVEM 274
                                             V Y ++     + G+ D A+E++ +M
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G  P+  +   +I G C++ K+ +A      M E G+  + V + ++I   V  +  
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           +G  ++   M    +NPD++TY+  + ++   G M+  + +   M   G+ P+   Y+ L
Sbjct: 439 EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTL 498

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            +GY       +A      M+  G+ PN   +T ++       S D +++++        
Sbjct: 499 IRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK------- 551

Query: 455 SPNLKTFETLMWGYSEARQPWRAE 478
             ++K  + L+   +E + P  A+
Sbjct: 552 IADMKDLQVLLEDITERQLPLAAD 575



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 190/416 (45%), Gaps = 7/416 (1%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P L    TLL AL   + F  + S+ S++    +      +  +INA+  +G++  A   
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLRT----YTTLINAYCLAGDIPAAKQH 94

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
              +  +GL P +  Y + + GY  AG    + ++  LM   G ++    TY  L+    
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAF-TYTALLHGLL 153

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
               + EA  V   M A    PD   Y T+     + G  ++AE ++ E   NG +PN  
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
               +I GYC  G+++ AL+    M      PN+  +  LI G  +    +    + + M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            E  + P+V+TY+ ++      G +     +   M   G+ P+   +S+L     + ++ 
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           E+A+  L ++++ G   N V++T++I G C  G +D A E+  KM   G  P+  ++ +L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-LLLAEARRATGLTKEAKRILSKI 519
           + G    ++  +A  +L+ M   G+     T+ +++ E  R  G ++  K+I  K+
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG-SEGPKKIFDKM 448



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 11/322 (3%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P LR  N L+ A    +   +  ++  +M A  ++    TY T+  AY   G+   A++ 
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +  + H G+ P+       + GYC+ G +  A R    M   G       +  L+ G   
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHG--- 151

Query: 331 IMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           ++    V E +A+    R +   PD   Y+T+++    AG  ++ + + ++    G +P+
Sbjct: 152 LLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPN 211

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ L  GY    E E A ++   M  +   PNV  +T +I G C  G ++RA+ +F 
Sbjct: 212 IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFS 271

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           +M E G+ PN+ T+  L+ G         A  +L +M+  G+ P   TF +L +A     
Sbjct: 272 RMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKRE 331

Query: 508 LTKEAKRIL-SKIKNKERTNEM 528
             +EA+  L S +K   + NE+
Sbjct: 332 KVEEAQLFLGSLVKKGVKVNEV 353


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 193/367 (52%), Gaps = 1/367 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A +I   +++ G++P  VT  +L+     + R +   S++ ++ E G  PD + +NA+I+
Sbjct: 139 ALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIID 198

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           +  ++  + +A D F +++  G+ P   TY  L+ G   + +  ++ +LL  M ++  + 
Sbjct: 199 SLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKK-KIT 257

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN+ TY+ L+ A+     + EA  +  +M    + PD+VTY+++      +   D+A ++
Sbjct: 258 PNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQM 317

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
              M   G   +  +   +I+G+CK  ++++ ++  R M + G+  N V +N LI+GF +
Sbjct: 318 FDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQ 377

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
             D D   E  + M  F ++PD+ TY+ ++      G ++K   IF+DM K  +  D   
Sbjct: 378 AGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVT 437

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ + +G  +  + E+A  L  ++   G  P++V +TT++SG C+ G +     ++ KM 
Sbjct: 438 YTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMK 497

Query: 451 EHGVSPN 457
           + G+  N
Sbjct: 498 QEGLMKN 504



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/472 (23%), Positives = 227/472 (48%), Gaps = 3/472 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A  +F+++++    PS+V +  LL+A+   K+++ + S+  ++E  G+  D   FN
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            VIN F     +  A+    KM + G  P   T  +L+ G+    +  ++V L+D M   
Sbjct: 125 IVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  KP++  YN ++ + C  K + +A++   ++   G++P+VVTY  +      +     
Sbjct: 185 G-YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSD 243

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  ++ +M    + PN  T   ++  + K GK+ EA      M    + P++V ++ LI 
Sbjct: 244 AARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLIN 303

Query: 327 GFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           G   + DR D  +++  LM       DV++Y+T++N +  A  ++   ++F +M + G+ 
Sbjct: 304 GLC-LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLV 362

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
            +   Y+ L +G+ +  + +KA+E    M   G  P++  +  ++ G C +G +++A+ +
Sbjct: 363 SNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVI 422

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F+ M +  +  ++ T+ T++ G  +  +   A  +   +   G+ P   T+  +      
Sbjct: 423 FEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCT 482

Query: 506 TGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQ 557
            GL  E + + +K+K +          D  +     L  K  +    P+LL+
Sbjct: 483 KGLLHEVEALYTKMKQEGLMKNDCTLSDGDITLSAELIKKMLSCGYAPSLLK 534



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 68/283 (24%), Positives = 127/283 (44%), Gaps = 44/283 (15%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+++ ++ GK  EA+ +F  ++     P +VTY++L+  L +  R +  + +  
Sbjct: 260 VITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFD 319

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G   D + +N +IN F ++  +E+ M  F +M + GL   T TYNTLI+G+  AG
Sbjct: 320 LMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAG 379

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVL-------------------------------- 219
             +++ +    M   G + P++ TYN+L                                
Sbjct: 380 DVDKAQEFFSQMDFFG-ISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTY 438

Query: 220 ---VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
              +R  C    + EAW++   ++  G+KPD+VTY T+ +     G   + E +  +M+ 
Sbjct: 439 TTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQ 498

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
            G+  N  T          +G I  +    + M   G  P+L+
Sbjct: 499 EGLMKNDCTLS--------DGDITLSAELIKKMLSCGYAPSLL 533


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 201/426 (47%), Gaps = 9/426 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIE--GGHKPSLV-TYTTLLAALTIQKRFNSIHSIM 130
           ++   + +    G P  A   F   +   G  +P+    Y  L+ AL  +    ++  + 
Sbjct: 98  ALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTAPRLYNHLIDALLRENMVGAVALVC 157

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + ++G+ P+   +N ++ A  ++  +  A     +M   G  P   TY T++      
Sbjct: 158 GNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTL 217

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ +E+ ++L          P   +YN ++ A C E  + E + V+  M   G++P+V+T
Sbjct: 218 GRVDEATEVLS------AAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVIT 271

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y TI  A+ + GE   A  ++  M   G  PN  T   ++ G   +G++ +AL   + M 
Sbjct: 272 YTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMV 331

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  P+ V +N+LI+G   + D  G   VL  M++    P+  TYST+++ +S AG +D
Sbjct: 332 AEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLD 391

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               I++DM ++G KP+   Y+ +   + ++    +AE L+  M+     PN V F T+I
Sbjct: 392 GAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLI 451

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C+   + RA+ VF +M  HG  PN +T+  L+ G         A +++  M+  G+ 
Sbjct: 452 RSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIE 511

Query: 491 PQKSTF 496
               T+
Sbjct: 512 LSLVTY 517



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 182/407 (44%), Gaps = 6/407 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +L +  +   A+ + + +   G  P  VTY T+++AL    R +    ++S      
Sbjct: 175 LVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGRVDEATEVLSAAP--- 231

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P +  +NAVI A      M+E       M   GL P   TY T++  +  AG+   + 
Sbjct: 232 --PVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMAC 289

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L  M   G   PN+ T+  LV    N+  + +A ++   M A G  P  V+YN +   
Sbjct: 290 AILARMVITG-CTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRG 348

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G+   A  V+ +ME +G  PN RT   +I G+ K G +  A+     M   G  PN
Sbjct: 349 LCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPN 408

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V++  ++  F + +  +  + ++  M      P+ +T++T++ +      + +   +F 
Sbjct: 409 VVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFH 468

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M + G  P+   Y+ L  G  RE     A ++++ M   G   ++V + T++SG C   
Sbjct: 469 EMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMR 528

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
               A+    +M   G+ P+  TF  ++  Y +  +   A  IL  M
Sbjct: 529 MGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAM 575



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 183/409 (44%), Gaps = 36/409 (8%)

Query: 147 AVINAFSESGNMEEAMDTFWK-MKESGLTPTTS--TYNTLIKGYGIAGKPEESVKLLDLM 203
           A + AF+ +G  + A+ TF++ + + G    T+   YN LI    +      +V L+   
Sbjct: 101 AAVGAFARAGAPDRALKTFYRAVHDLGCARPTAPRLYNHLIDAL-LRENMVGAVALVCGN 159

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            R+  V+PN+ TYN+LVRA C    +  A  ++ +MA  G  PD VTY TI +A    G 
Sbjct: 160 MRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLGR 219

Query: 264 ADQAEEVIV------------------------------EMEHNGVQPNGRTCGIIISGY 293
            D+A EV+                               +M   G+QPN  T   I++ +
Sbjct: 220 VDEATEVLSAAPPVAASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAF 279

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG-FVEIMDRDGVDEVLALMKEFRVNPD 352
           CK G+++ A      M   G  PN+  F  L+ G F +    D +D    ++ E    P 
Sbjct: 280 CKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWA-PS 338

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
            ++Y+ ++    + G +     + +DM + G  P+A  YS L  G+ +  + + A  +  
Sbjct: 339 TVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWN 398

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M  SG  PNVV++T ++  +C     ++A  + DKM      PN  TF TL+      R
Sbjct: 399 DMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCR 458

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           +  RA  +   M+  G  P   T+  L       G   +A +++ +++N
Sbjct: 459 RVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQN 507



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 184/394 (46%), Gaps = 1/394 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++ +L    + QE  A+  +++  G +P+++TYTT++ A           +I++++
Sbjct: 236 SYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARM 295

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P+   F A++      G + +A+D +  M   G  P+T +YN LI+G    G  
Sbjct: 296 VITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDL 355

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + +  +L+ M + G   PN RTY+ L+  +    ++  A ++ + M  SG KP+VV Y  
Sbjct: 356 KGASSVLNDMEQHG-CFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTN 414

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + +    +QAE +I +M      PN  T   +I   C   ++  AL     M+ +G
Sbjct: 415 MVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHG 474

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             PN   +N L+ G     +     +++  M+   +   ++TY+T+++         +  
Sbjct: 475 CPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAM 534

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
                M   GI+PDA  ++ +   Y +E E   A  +L  M       N++++T +++  
Sbjct: 535 FFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAEL 594

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           C+   ++ A+    KM   G+ PN  T+  L+ G
Sbjct: 595 CNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRG 628



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 97/447 (21%), Positives = 193/447 (43%), Gaps = 6/447 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R    L+++L+          +  N+ + G +P++ TY  L+ AL    R  +   ++ +
Sbjct: 135 RLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDE 194

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +   G  PD + +  +++A    G ++EA +       S   P  ++YN +I       +
Sbjct: 195 MATKGCPPDDVTYGTIVSALCTLGRVDEATEVL-----SAAPPVAASYNAVILALCREFR 249

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +E   ++  M   G ++PN+ TY  +V A+C    +  A  ++ +M  +G  P+V T+ 
Sbjct: 250 MQEVFAVVGDMVGRG-LQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFT 308

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +      +G    A ++   M   G  P+  +  ++I G C  G +K A      M+++
Sbjct: 309 ALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQH 368

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G  PN   ++ LI GF +  D DG   +   M      P+V+ Y+ ++  +      ++ 
Sbjct: 369 GCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQA 428

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           + + D M      P+   ++ L +     +   +A  +   M   G  PN   +  ++ G
Sbjct: 429 ESLIDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHG 488

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
              +G+   A+++  +M  HG+  +L T+ T++ G  + R    A   +  M   G+ P 
Sbjct: 489 LFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPD 548

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKI 519
             TF  +  A    G  + A  IL  +
Sbjct: 549 AFTFTAIIHAYCKEGEVRMAAWILGAM 575



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 65/255 (25%), Positives = 127/255 (49%), Gaps = 1/255 (0%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+ + L++   + G    A +I+N++   G KP++V YT ++     +  FN   S++ +
Sbjct: 375 RTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDK 434

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +      P+++ FN +I +      +  A+  F +M+  G  P   TYN L+ G    G 
Sbjct: 435 MLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGN 494

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             ++++++  M   G ++ +L TYN +V   C  +   EA   + +M   G++PD  T+ 
Sbjct: 495 CGDALQMVIEMQNHG-IELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFT 553

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            I  AY + GE   A  ++  M       N     I+++  C + K+++A+ +   M   
Sbjct: 554 AIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYE 613

Query: 313 GVHPNLVIFNLLIKG 327
           G++PN V +N+L++G
Sbjct: 614 GIYPNTVTWNVLVRG 628



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 43/198 (21%), Positives = 86/198 (43%), Gaps = 1/198 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L+ SL    +   A  +F+ +   G  P+  TY  LL  L  +        ++ ++
Sbjct: 446 TFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEM 505

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + +G++   + +N V++   +     EAM    +M   G+ P   T+  +I  Y   G+ 
Sbjct: 506 QNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEV 565

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +  +L  M+   N   N+  Y +L+   CN+  + +A   + KM   G+ P+ VT+N 
Sbjct: 566 RMAAWILGAMNVV-NCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNV 624

Query: 254 IATAYAQNGEADQAEEVI 271
           +     +N   +   + I
Sbjct: 625 LVRGVFRNLGCNNPSDFI 642


>gi|125561029|gb|EAZ06477.1| hypothetical protein OsI_28715 [Oryza sativa Indica Group]
          Length = 621

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 191/392 (48%), Gaps = 3/392 (0%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           TYT LL  L          ++   +  +   PD+  +  +++   E+G  EEA     + 
Sbjct: 144 TYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN-VKPNLRTYNVLVRAWCNEK 227
             +G  P    YN LI GY  AG+ E ++K+ + M  +GN   PN+RTY  L+   C   
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGM--DGNRCSPNVRTYTELIHGLCKSG 261

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
            +  A  +  +M  +G++P+VVTY  +       G    A  ++  ME NG+ PN  T  
Sbjct: 262 KVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFS 321

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           ++I   CK  K++EA  F  ++ + GV  N V++  LI G  +    D  DE++  M   
Sbjct: 322 VLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE 381

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
              PD  +YS++++       + +   + +DM + GI+     Y+I+    VRE   E  
Sbjct: 382 GFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGP 441

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           +++   MI +G +P++V +T  +  +C +G M+ A  +  +M + GV PNL T+ TL+ G
Sbjct: 442 KKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           Y+      +A    ++M   G  P + ++ +L
Sbjct: 502 YANLGLVSQAFSTFEVMVGKGWKPNEDSYTVL 533



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 201/448 (44%), Gaps = 11/448 (2%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R +R+ T L+N+    G    A+    +L+  G  P    YT+ +              +
Sbjct: 70  RNLRTYTTLINAYCLAGDIPAAKQHLTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRV 129

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
              +   G    +  + A+++    +G + EAM  F  M+     P T  Y T++ G   
Sbjct: 130 FVLMPLRGCLRTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCE 189

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           AG+ EE+  LL+     G  +PN+  YN L+  +CN   +  A  V   M  +   P+V 
Sbjct: 190 AGRTEEAEVLLEEAMSNG-FEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVR 248

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +     ++G+ ++A  +   M   G++PN  T   +I G C EG ++ A R    M
Sbjct: 249 TYTELIHGLCKSGKVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLM 308

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM-----KEFRVNPDVITYSTIMNAWS 364
           +  G+ PN   F++LI    +   R+ V+E    +     K  +VN   + Y+++++   
Sbjct: 309 ETNGLVPNDWTFSVLIDALCK---REKVEEAQLFLGSLVKKGVKVNE--VVYTSLIDGLC 363

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G +D   E+   M   G  PDAH+YS L  G  R+++  +A  +L  M+E G   + V
Sbjct: 364 KTGKIDAADELMQKMISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPV 423

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +T II     +   +   ++FDKM   G++P++ T+   +  Y E  +   AE ++  M
Sbjct: 424 TYTIIIDELVREVGSEGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQM 483

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEA 512
              GV P   T+  L       GL  +A
Sbjct: 484 VDRGVFPNLVTYNTLIRGYANLGLVSQA 511



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/444 (22%), Positives = 195/444 (43%), Gaps = 43/444 (9%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           RT  + T L++ L+  G  +EA  +F  +      P    Y T++  L    R      +
Sbjct: 140 RTAFTYTALLHGLLGAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVL 199

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + +   NG +P+ + +NA+I+ +  +G ME A+  F  M  +  +P   TY  LI G   
Sbjct: 200 LEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCK 259

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD-- 247
           +GK E ++ L   M  E  ++PN+ TY  L++  CNE ++  A+ ++H M  +G+ P+  
Sbjct: 260 SGKVERAMVLFSRMV-EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318

Query: 248 ---------------------------------VVTYNTIATAYAQNGEADQAEEVIVEM 274
                                             V Y ++     + G+ D A+E++ +M
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G  P+  +   +I G C++ K+ +A      M E G+  + V + ++I   V  +  
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           +G  ++   M    +NPD++TY+  + ++   G M+  + +   M   G+ P+   Y+ L
Sbjct: 439 EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTL 498

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            +GY       +A      M+  G+ PN   +T ++       S D +++++        
Sbjct: 499 IRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLLRLVVKKSSSDNSVDIWK------- 551

Query: 455 SPNLKTFETLMWGYSEARQPWRAE 478
             ++K  + L+   +E + P  A+
Sbjct: 552 IADMKDLQVLLEDITERQLPLAAD 575



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 190/416 (45%), Gaps = 7/416 (1%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P L    TLL AL   + F  + S+ S++    +      +  +INA+  +G++  A   
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLRT----YTTLINAYCLAGDIPAAKQH 94

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
              +  +GL P +  Y + + GY  AG    + ++  LM   G ++    TY  L+    
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAF-TYTALLHGLL 153

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
               + EA  V   M A    PD   Y T+     + G  ++AE ++ E   NG +PN  
Sbjct: 154 GAGMVREAMTVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
               +I GYC  G+++ AL+    M      PN+  +  LI G  +    +    + + M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            E  + P+V+TY+ ++      G +     +   M   G+ P+   +S+L     + ++ 
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           E+A+  L ++++ G   N V++T++I G C  G +D A E+  KM   G  P+  ++ +L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-LLLAEARRATGLTKEAKRILSKI 519
           + G    ++  +A  +L+ M   G+     T+ +++ E  R  G ++  K+I  K+
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG-SEGPKKIFDKM 448



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/320 (25%), Positives = 146/320 (45%), Gaps = 7/320 (2%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P LR  N L+ A    +   +  ++  +M A  ++    TY T+  AY   G+   A++ 
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +  + H G+ P+       + GYC+ G +  A R    M   G       +  L+ G + 
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHGLLG 154

Query: 331 I-MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
             M R+ +  V   M+     PD   Y+T+++    AG  ++ + + ++    G +P+  
Sbjct: 155 AGMVREAM-TVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+ L  GY    E E A ++   M  +   PNV  +T +I G C  G ++RA+ +F +M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
            E G+ PN+ T+  L+ G         A  +L +M+  G+ P   TF +L +A       
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 510 KEAKRIL-SKIKNKERTNEM 528
           +EA+  L S +K   + NE+
Sbjct: 334 EEAQLFLGSLVKKGVKVNEV 353


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 215/447 (48%), Gaps = 12/447 (2%)

Query: 72   VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
            V+   +++  L +  +  +  A+   ++E G +PS+VTY TLL +   + R + +  ++ 
Sbjct: 1084 VKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLK 1143

Query: 132  QVEENGMD--PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
            ++E  G    P+ + +N VI   +  G++EEA +    M+ S    ++ TYN LI G   
Sbjct: 1144 EMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KASSFTYNPLITGLLA 1202

Query: 190  AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
             G  ++   L   M  EG + P + TYN ++        +  A     +M A G+ PDV+
Sbjct: 1203 RGCVKKVYDLQLEMENEG-IMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVI 1261

Query: 250  TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            TYN++   Y + G   +A  +  ++   G+ P   T  I+I GYC+ G ++EA      M
Sbjct: 1262 TYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEM 1321

Query: 310  KEYGVHPNLVIFNLLIKGFVEI----MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
             E G  PN+  + +L+KG + +    M R+  DE+L+      + PD   Y+T + A   
Sbjct: 1322 GEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSK----GLQPDCFAYNTRICAELI 1377

Query: 366  AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
             G + +  E+ + +   GI  D   Y+IL  G  +    + A+EL M M+ +G  P+ + 
Sbjct: 1378 LGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCIT 1437

Query: 426  FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
            +T +I   C  G +  A ++F+ M   G+ P+  TF  ++  Y      + A    + M 
Sbjct: 1438 YTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKML 1497

Query: 486  AFGVHPQKSTFLLLAEARRATGLTKEA 512
              GV P + T+ +L  A    G T+ A
Sbjct: 1498 EEGVEPNEITYNVLIHALCRMGRTQLA 1524



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 189/426 (44%), Gaps = 18/426 (4%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEG---GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
            ++  L  +G  +EA      L+EG     K S  TY  L+  L  +     ++ +  ++E
Sbjct: 1162 VITGLTRKGDLEEAA----ELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEME 1217

Query: 135  ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
              G+ P  + +NA+I+   +SG +E A   F +M+  GL P   TYN+L+ GY  AG  +
Sbjct: 1218 NEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLK 1277

Query: 195  ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            E++ L   + R G + P + TYN+L+  +C   ++ EA  +  +M   G  P+V TY  +
Sbjct: 1278 EALLLFGDLRRAG-LAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTIL 1336

Query: 255  ATAYAQNGEADQAEEVIVEMEHNGVQP-----NGRTCGIIISGYCKEGKIKEALRFARTM 309
                        A E   EM   G+QP     N R C  +I G      I  A      +
Sbjct: 1337 MKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILG-----DIARAFELREVL 1391

Query: 310  KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
               G+  + V +N+LI G  +  +     E+   M    + PD ITY+ +++A    G +
Sbjct: 1392 MLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLL 1451

Query: 370  DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
             + ++IF++M   G+ P A  ++++   Y R      A      M+E G  PN + +  +
Sbjct: 1452 REARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 1511

Query: 430  ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            I   C  G    A   F +M E G+  N  T+  L+ G  +      A      M   G+
Sbjct: 1512 IHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGI 1571

Query: 490  HPQKST 495
            HP   T
Sbjct: 1572 HPDYLT 1577



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 190/391 (48%), Gaps = 1/391 (0%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L+  L+ RG  ++   +   +   G  P++VTY  ++  L       +     +++   G
Sbjct: 1196 LITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMG 1255

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            + PD I +N+++N + ++GN++EA+  F  ++ +GL PT  TYN LI GY   G  EE+ 
Sbjct: 1256 LLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEAR 1315

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             L + M  +G + PN+ TY +L++   N +++  A     +M + G++PD   YNT   A
Sbjct: 1316 ILKEEMGEQGCL-PNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICA 1374

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                G+  +A E+   +   G+  +  T  I+I G CK G +K+A      M   G+ P+
Sbjct: 1375 ELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 1434

Query: 318  LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             + +  LI    E        ++   M    + P  +T++ I++A+   G +      F 
Sbjct: 1435 CITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFR 1494

Query: 378  DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
             M + G++P+   Y++L     R    + A      M+E G   N   +T +I G C  G
Sbjct: 1495 KMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVG 1554

Query: 438  SMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            + + A+  + +M ++G+ P+  T + L+ G+
Sbjct: 1555 NWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 191/397 (48%), Gaps = 10/397 (2%)

Query: 128  SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            S   ++  +G+ PD    N V+    ++   ++      +M E G+ P+  TYNTL+  +
Sbjct: 1070 SAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSF 1129

Query: 188  GIAGKPEESVKLLDLMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
               G+ ++   LL  M   G+   PN  TYNV++     + ++ EA  ++  M  S  K 
Sbjct: 1130 LKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KA 1188

Query: 247  DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRF 305
               TYN + T     G   +  ++ +EME+ G+ P   T   +I G  + G ++ A ++F
Sbjct: 1189 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 1248

Query: 306  ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNA 362
            A  M+  G+ P+++ +N L+ G+ +      + E L L  + R   + P V+TY+ +++ 
Sbjct: 1249 AE-MRAMGLLPDVITYNSLLNGYCKA---GNLKEALLLFGDLRRAGLAPTVLTYNILIDG 1304

Query: 363  WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
            +   G +++ + + ++MG+ G  P+   Y+IL KG +  +    A E    M+  G  P+
Sbjct: 1305 YCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPD 1364

Query: 423  VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
               + T I      G + RA E+ + +   G+S +  T+  L+ G  +      A+E+  
Sbjct: 1365 CFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQM 1424

Query: 483  IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             M + G+ P   T+  L  A    GL +EA++I + +
Sbjct: 1425 KMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNM 1461



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 2/266 (0%)

Query: 64   MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
            M ++ C   V + T LM   +       A+  F+ ++  G +P    Y T + A  I   
Sbjct: 1321 MGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGD 1380

Query: 123  FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                  +   +   G+  D++ +N +I+   ++GN+++A +   KM  +GL P   TY  
Sbjct: 1381 IARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTC 1440

Query: 183  LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
            LI  +   G   E+ K+ + M  +G + P+  T+ V++ A+C   N+  A+    KM   
Sbjct: 1441 LIHAHCERGLLREARKIFNNMISDG-LLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEE 1499

Query: 243  GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            G++P+ +TYN +  A  + G    A     EM   G+  N  T  ++I G CK G  ++A
Sbjct: 1500 GVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDA 1559

Query: 303  LRFARTMKEYGVHPNLVIFNLLIKGF 328
            +RF   M + G+HP+ +    L+KGF
Sbjct: 1560 MRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 130/293 (44%), Gaps = 1/293 (0%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            TV +   L++     G  +EA+ +   + E G  P++ TYT L+      +         
Sbjct: 1294 TVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFF 1353

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++   G+ PD   +N  I A    G++  A +    +   G++  T TYN LI G    
Sbjct: 1354 DEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKT 1413

Query: 191  GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            G  +++ +L   M   G ++P+  TY  L+ A C    + EA  + + M + G+ P  VT
Sbjct: 1414 GNLKDAKELQMKMVSNG-LQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVT 1472

Query: 251  YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            +  I  AY + G    A     +M   GV+PN  T  ++I   C+ G+ + A      M 
Sbjct: 1473 FTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEML 1532

Query: 311  EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
            E G+  N   + LLI G  ++ + +        M +  ++PD +T+  ++  +
Sbjct: 1533 ERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 108/239 (45%), Gaps = 12/239 (5%)

Query: 293  YCKEGKIKEA---------LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            Y KE K ++A         L   R M  +GV P++   N +++   +    D +  V   
Sbjct: 1050 YSKECKARDATLDTCSTLCLSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEE 1109

Query: 344  MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK--AGIKPDAHAYSILAKGYVRE 401
            M E  + P ++TY+T+++++   G  DK   +  +M    +G  P+   Y+++  G  R+
Sbjct: 1110 MLELGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRK 1169

Query: 402  QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
             + E+A EL+  M  S    +   +  +I+G  + G + +  ++  +M   G+ P + T+
Sbjct: 1170 GDLEEAAELVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTY 1228

Query: 462  ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
              ++ G  ++     A+     M+A G+ P   T+  L       G  KEA  +   ++
Sbjct: 1229 NAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR 1287


>gi|222640310|gb|EEE68442.1| hypothetical protein OsJ_26820 [Oryza sativa Japonica Group]
          Length = 621

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 191/392 (48%), Gaps = 3/392 (0%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           TYT LL  L          ++   +  +   PD+  +  +++   E+G  EEA     + 
Sbjct: 144 TYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEA 203

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN-VKPNLRTYNVLVRAWCNEK 227
             +G  P    YN LI GY  AG+ E ++K+ + M  +GN   PN+RTY  L+   C   
Sbjct: 204 MSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGM--DGNRCSPNVRTYTELIHGLCKSG 261

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
            +  A  +  +M  +G++P+VVTY  +       G    A  ++  ME NG+ PN  T  
Sbjct: 262 KVERAMVLFSRMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFS 321

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           ++I   CK  K++EA  F  ++ + GV  N V++  LI G  +    D  DE++  M   
Sbjct: 322 VLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISE 381

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
              PD  +YS++++       + +   + +DM + GI+     Y+I+    VRE   E  
Sbjct: 382 GFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGSEGP 441

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           +++   MI +G +P++V +T  +  +C +G M+ A  +  +M + GV PNL T+ TL+ G
Sbjct: 442 KKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTLIRG 501

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           Y+      +A    ++M   G  P + ++ +L
Sbjct: 502 YANLGLVSQAFSTFEVMVGKGWKPNEDSYTVL 533



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 191/396 (48%), Gaps = 1/396 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           RT  + T L++ L+  G  +EA A+F  +      P    Y T++  L    R      +
Sbjct: 140 RTAFTYTALLHGLLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVL 199

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + +   NG +P+ + +NA+I+ +  +G ME A+  F  M  +  +P   TY  LI G   
Sbjct: 200 LEEAMSNGFEPNIVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCK 259

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +GK E ++ L   M  E  ++PN+ TY  L++  CNE ++  A+ ++H M  +G+ P+  
Sbjct: 260 SGKVERAMVLFSRMV-EAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDW 318

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           T++ +  A  +  + ++A+  +  +   GV+ N      +I G CK GKI  A    + M
Sbjct: 319 TFSVLIDALCKREKVEEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKM 378

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G  P+   ++ LI G            +L  M E  +    +TY+ I++        
Sbjct: 379 ISEGFVPDAHSYSSLIDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVGS 438

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +  K+IFD M   GI PD   Y++  + Y  E   E AE +++ M++ G  PN+V + T+
Sbjct: 439 EGPKKIFDKMIATGINPDIVTYTVFVRSYCEEGRMEDAESMIVQMVDRGVFPNLVTYNTL 498

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           I G+ + G + +A   F+ M   G  PN  ++  L+
Sbjct: 499 IRGYANLGLVSQAFSTFEVMVGKGWKPNEDSYTVLL 534



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 102/416 (24%), Positives = 190/416 (45%), Gaps = 7/416 (1%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P L    TLL AL   + F  + S+ S++    +      +  +INA+  +G++  A   
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLRT----YTTLINAYCLAGDIPAAKQH 94

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
              +  +GL P +  Y + + GY  AG    + ++  LM   G ++    TY  L+    
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAF-TYTALLHGLL 153

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
               + EA  V   M A    PD   Y T+     + G  ++AE ++ E   NG +PN  
Sbjct: 154 GAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPNIV 213

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
               +I GYC  G+++ AL+    M      PN+  +  LI G  +    +    + + M
Sbjct: 214 VYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFSRM 273

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            E  + P+V+TY+ ++      G +     +   M   G+ P+   +S+L     + ++ 
Sbjct: 274 VEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKREKV 333

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           E+A+  L ++++ G   N V++T++I G C  G +D A E+  KM   G  P+  ++ +L
Sbjct: 334 EEAQLFLGSLVKKGVKVNEVVYTSLIDGLCKTGKIDAADELMQKMISEGFVPDAHSYSSL 393

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-LLLAEARRATGLTKEAKRILSKI 519
           + G    ++  +A  +L+ M   G+     T+ +++ E  R  G ++  K+I  K+
Sbjct: 394 IDGLCRQKKLSQATLMLEDMMEKGIQASPVTYTIIIDELVREVG-SEGPKKIFDKM 448



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 83/322 (25%), Positives = 147/322 (45%), Gaps = 11/322 (3%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P LR  N L+ A    +   +  ++  +M A  ++    TY T+  AY   G+   A++ 
Sbjct: 39  PPLRCLNTLLMALARHRMFPDMESLASRMPARNLR----TYTTLINAYCLAGDIPAAKQH 94

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +  + H G+ P+       + GYC+ G +  A R    M   G       +  L+ G   
Sbjct: 95  LTSLLHAGLAPDSYAYTSFVLGYCRAGMLTHACRVFVLMPLRGCLRTAFTYTALLHG--- 151

Query: 331 IMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           ++    V E +A+    R +   PD   Y+T+++    AG  ++ + + ++    G +P+
Sbjct: 152 LLGAGMVREAMAVFVGMRADSCAPDTHVYATMVHGLCEAGRTEEAEVLLEEAMSNGFEPN 211

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ L  GY    E E A ++   M  +   PNV  +T +I G C  G ++RA+ +F 
Sbjct: 212 IVVYNALIDGYCNAGEMEHALKVFEGMDGNRCSPNVRTYTELIHGLCKSGKVERAMVLFS 271

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           +M E G+ PN+ T+  L+ G         A  +L +M+  G+ P   TF +L +A     
Sbjct: 272 RMVEAGLEPNVVTYTALIQGQCNEGHLQCAFRLLHLMETNGLVPNDWTFSVLIDALCKRE 331

Query: 508 LTKEAKRIL-SKIKNKERTNEM 528
             +EA+  L S +K   + NE+
Sbjct: 332 KVEEAQLFLGSLVKKGVKVNEV 353


>gi|224103707|ref|XP_002313163.1| predicted protein [Populus trichocarpa]
 gi|222849571|gb|EEE87118.1| predicted protein [Populus trichocarpa]
          Length = 643

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 215/432 (49%), Gaps = 1/432 (0%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           +EA A+F ++   G  P  VTY TLL      +R      ++ ++E NG  P  + +N++
Sbjct: 121 EEAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSL 180

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           I+A++  G +EEAM+   +M E G+     TY  ++ G+   GK E ++++ + M R   
Sbjct: 181 ISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEM-RTAG 239

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            KPN+ T+N L++   N     E   V  ++      PD+VT+NT+   + QNG   +  
Sbjct: 240 CKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVS 299

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            V  EM+  G  P   T   +IS Y + G   +A+   + M + G+ P+L  +N ++   
Sbjct: 300 GVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAAL 359

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
                 +  +++LA M++    P+ +T+ ++++A++    + +   + +++    I+P A
Sbjct: 360 ARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHA 419

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
                L     +     +AE   + +   GF P++     +I+ +     + +  E+ + 
Sbjct: 420 VLLKTLVLVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNF 479

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M E G +P+L T+ +LM+ +S++    R+EE+L+ + A G+ P   ++  +  A    G 
Sbjct: 480 MKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGR 539

Query: 509 TKEAKRILSKIK 520
            KEA  I S+++
Sbjct: 540 MKEASHIFSEMR 551



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 220/449 (48%), Gaps = 8/449 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N L + GK   A ++ NNL + G +P +  YT+L+ A     R+     +  ++EE G
Sbjct: 4   IINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEEG 63

Query: 138 MDPDSIFFNAVINAFSESGN-MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
             P  I +N ++N + + G    +    F  MK +G+ P   TYNTLI         EE+
Sbjct: 64  CKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEEA 123

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
             + + M   G V P+  TYN L+  +   + I EA  V+ +M  +G  P +VTYN++ +
Sbjct: 124 AAVFEDMKSMGFV-PDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLIS 182

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           AYA++G  ++A E+  +M   G++ +  T   ++SG+ + GK + A+R    M+  G  P
Sbjct: 183 AYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKP 242

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCK 373
           N+  FN LIK      +R    E++ + +E ++    PD++T++T++  +   G   +  
Sbjct: 243 NICTFNALIKMH---GNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVS 299

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +F +M + G  P+   Y+ L   Y R    ++A  +   M+++G  P++  +  +++  
Sbjct: 300 GVFKEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAAL 359

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G  +++ ++  +M +    PN  T  +L+  Y+  ++  R   + + + +  + P  
Sbjct: 360 ARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHA 419

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK 522
                L        L  EA+R   ++K K
Sbjct: 420 VLLKTLVLVNSKCDLLLEAERAFLELKRK 448



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 197/434 (45%), Gaps = 38/434 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   L+++    G  +EA  + N ++E G K  + TYT +L+      +  S   + 
Sbjct: 173 SIVTYNSLISAYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVF 232

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G  P+   FNA+I      G   E M  F ++K     P   T+NTL+  +G  
Sbjct: 233 EEMRTAGCKPNICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQN 292

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E   +   M R G V P   TYN L+ A+    +  +A  +  +M  +G+ PD+ T
Sbjct: 293 GMDSEVSGVFKEMKRVGFV-PERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLST 351

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +  A A+ G  +Q+E+++ EM+    +PN  T   ++  Y    +I   L  A  + 
Sbjct: 352 YNAVLAALARGGLWEQSEKILAEMQDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEIC 411

Query: 311 EYGVHPNLVIFNLLI-------------KGFVEIMDRDG--------------------- 336
              + P+ V+   L+             + F+E + R G                     
Sbjct: 412 SGVIEPHAVLLKTLVLVNSKCDLLLEAERAFLE-LKRKGFSPDLSTLNAMIAIYGRRQMV 470

Query: 337 --VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
              +E+L  MKE    P + TY+++M   S +   ++ +E+  ++   GIKPD  +Y+ +
Sbjct: 471 TKTNEILNFMKESGFTPSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTV 530

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
              Y R    ++A  +   M ESG  P+V+ + T ++ + +D   + AI+V   M +HG 
Sbjct: 531 IFAYCRNGRMKEASHIFSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGC 590

Query: 455 SPNLKTFETLMWGY 468
            PN  T+ +++ GY
Sbjct: 591 KPNQNTYNSVIDGY 604



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 190/383 (49%), Gaps = 7/383 (1%)

Query: 80  NSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           N+LI+    RGK  E   +F  +      P +VT+ TLLA        + +  +  +++ 
Sbjct: 248 NALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKR 307

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P+   +N +I+A+S  G+ ++AM  + +M ++G+TP  STYN ++      G  E+
Sbjct: 308 VGFVPERDTYNTLISAYSRCGSFDQAMAMYKRMLDTGITPDLSTYNAVLAALARGGLWEQ 367

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           S K+L  M ++G  KPN  T+  L+ A+ N K I     +  ++ +  ++P  V   T+ 
Sbjct: 368 SEKILAEM-QDGMCKPNELTHCSLLHAYANGKEIGRMLALAEEICSGVIEPHAVLLKTLV 426

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              ++     +AE   +E++  G  P+  T   +I+ Y +   + +       MKE G  
Sbjct: 427 LVNSKCDLLLEAERAFLELKRKGFSPDLSTLNAMIAIYGRRQMVTKTNEILNFMKESGFT 486

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+L  +N L+    +  + +  +EVL  +    + PD+I+Y+T++ A+   G M +   I
Sbjct: 487 PSLATYNSLMYMHSQSENFERSEEVLKEILAKGIKPDIISYNTVIFAYCRNGRMKEASHI 546

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F +M ++G+ PD   Y+     Y  +   E+A +++  MI+ G  PN   + ++I G+C 
Sbjct: 547 FSEMRESGLIPDVITYNTFVASYAADSMFEEAIDVVCYMIKHGCKPNQNTYNSVIDGYCK 606

Query: 436 DGSMDRAIEVFDKMCEHGVSPNL 458
               D AI+    +  H + P++
Sbjct: 607 LNRRDDAIKFISSL--HELDPHI 627



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/339 (23%), Positives = 152/339 (44%), Gaps = 40/339 (11%)

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           V++     E  ++ A ++++ +   G +PDV  Y ++ TA   NG   +A  V  +ME  
Sbjct: 3   VIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEEE 62

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALR-FARTMKEYGVHPNLVIFNLLIK---------- 326
           G +P   T  +I++ Y K G     +      MK  G+ P+   +N LI           
Sbjct: 63  GCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYEE 122

Query: 327 -----------GFV-------EIMDRDG----VDEVLALMKEFRVN---PDVITYSTIMN 361
                      GFV        ++D  G    + E + +++E  VN   P ++TY+++++
Sbjct: 123 AAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLIS 182

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
           A++  G +++  E+ + M + GIK D   Y+ +  G+VR  + E A  +   M  +G  P
Sbjct: 183 AYARDGLLEEAMELKNQMVERGIKLDVFTYTAMLSGFVRTGKDESAMRVFEEMRTAGCKP 242

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           N+  F  +I    + G     ++VF+++      P++ T+ TL+  + +         + 
Sbjct: 243 NICTFNALIKMHGNRGKFAEMMKVFEEIKICCCVPDIVTWNTLLAVFGQNGMDSEVSGVF 302

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEA----KRIL 516
           + MK  G  P++ T+  L  A    G   +A    KR+L
Sbjct: 303 KEMKRVGFVPERDTYNTLISAYSRCGSFDQAMAMYKRML 341



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 44/192 (22%), Positives = 76/192 (39%), Gaps = 36/192 (18%)

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           + I+N     G +     + +++ K G +PD +AY+ L    V      +A  +   M E
Sbjct: 2   AVIINMLGKEGKVSVAASLLNNLHKDGFEPDVYAYTSLITACVSNGRYREAVMVFKKMEE 61

Query: 417 SGFHPNVVIFTTIISGW-----------------------------------CSDGSM-D 440
            G  P ++ +  I++ +                                   C  GS+ +
Sbjct: 62  EGCKPTLITYNVILNVYGKMGMPWNKITGLFEGMKNAGILPDEYTYNTLITCCRRGSLYE 121

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            A  VF+ M   G  P+  T+ TL+  Y ++R+   A E+L+ M+  G  P   T+  L 
Sbjct: 122 EAAAVFEDMKSMGFVPDKVTYNTLLDVYGKSRRIKEAIEVLREMEVNGCSPSIVTYNSLI 181

Query: 501 EARRATGLTKEA 512
            A    GL +EA
Sbjct: 182 SAYARDGLLEEA 193


>gi|357502007|ref|XP_003621292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124360248|gb|ABN08261.1| Pentatricopeptide repeat [Medicago truncatula]
 gi|355496307|gb|AES77510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 738

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 198/424 (46%), Gaps = 7/424 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++       K  EA+++F  + + G  P +  Y  L+      + F+   ++   +
Sbjct: 297 AYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSM 356

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+  + + F+ +++   E G   E +D F + KESGL      YN L       GK 
Sbjct: 357 ISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKV 416

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +++V +LD + +   +  +++ Y  L+  +  +    EA ++  +M   G KPDVV YN 
Sbjct: 417 DDAVGMLDEL-KSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNV 475

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +A  + +N    +A +++  ME  GV+PN  T  III G C  GK++EA  F   +K   
Sbjct: 476 LAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGES 535

Query: 314 VHPNLVIFNLLIKGFVE---IMDRDGVDEVLALMK---EFRVNPDVITYSTIMNAWSTAG 367
           V  ++ I+  L+ G+ E   I     + E   L++   E  + P  + YS I  A    G
Sbjct: 536 VEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNG 595

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            M+    +F+     G  PDA  Y+I+  GY +     +A EL   M E G  P+ V +T
Sbjct: 596 NMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYT 655

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +I+G+C    +  A E+F  M E G+ P++  +  ++ G   +     A ++   M   
Sbjct: 656 IMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEIAFQLYNEMIDM 715

Query: 488 GVHP 491
           G+ P
Sbjct: 716 GMTP 719



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/456 (22%), Positives = 205/456 (44%), Gaps = 9/456 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++ +L ++G  +    +F+ + E G       Y T +  L    R +  ++++   
Sbjct: 227 TYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDY 286

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
                      + AVI  F     ++EA   F +M++ GL P    Y  L+ GY  +   
Sbjct: 287 RTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNF 346

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++++ +   M   G +K N   ++ ++          E  ++  +   SG+  D   YN 
Sbjct: 347 DKALAVYKSMISRG-IKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNI 405

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A  + G+ D A  ++ E++   +  + +    +I+GY  +GK  EA    + M+E G
Sbjct: 406 LFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERG 465

Query: 314 VHPNLVIFNLLIKGFVE-IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
             P++V +N+L  GF     D + +D +L  M+   V P+  T+  I+    +AG +++ 
Sbjct: 466 FKPDVVAYNVLAAGFFRNRTDFEAMD-LLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEA 524

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL------LMTMIESGFHPNVVIF 426
           +E F+ +    ++     Y+ L  GY      EK+ EL      L TM+E    P+ V++
Sbjct: 525 EEFFNWLKGESVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMY 584

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           + I +  C +G+M+ A  +F+     G +P+  T+  ++ GY +      A E+ + MK 
Sbjct: 585 SKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKE 644

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            G+ P   T+ ++          +EA  +   +K +
Sbjct: 645 RGITPDAVTYTIMINGYCKMNCLREAHELFKDMKER 680



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 157/317 (49%), Gaps = 7/317 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L ++L + GK  +A  + + L        +  YTTL+    +Q +     S+  ++EE G
Sbjct: 406 LFDALCKLGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERG 465

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + +N +   F  +    EAMD    M+  G+ P ++T+  +I+G   AGK EE+ 
Sbjct: 466 FKPDVVAYNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAE 525

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCN----EKN--ITEAWNVMHKMAASGMKPDVVTY 251
           +  + +  E +V+ ++  Y  LV  +C     EK+  + EA+ ++  M    MKP  V Y
Sbjct: 526 EFFNWLKGE-SVEISVEIYTALVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMY 584

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + I TA   NG  + A  +     H G  P+  T  I+I+GYCK   + EA    + MKE
Sbjct: 585 SKIFTALCCNGNMEGAHTLFNLFIHTGFTPDAVTYTIMINGYCKTNCLPEAHELFKDMKE 644

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P+ V + ++I G+ ++       E+   MKE  + PDVI Y+ I+     +G  + 
Sbjct: 645 RGITPDAVTYTIMINGYCKMNCLREAHELFKDMKERGIKPDVIAYTVIIKGLLNSGHTEI 704

Query: 372 CKEIFDDMGKAGIKPDA 388
             +++++M   G+ P A
Sbjct: 705 AFQLYNEMIDMGMTPGA 721



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 98/399 (24%), Positives = 182/399 (45%), Gaps = 9/399 (2%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P+++++  L+  L      +    +  + +  G+  +   +  VI A  + G+ E  +  
Sbjct: 188 PNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRV 247

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAW 223
           F +MKE+G+   +  Y T I+G     + +    +L D  +R  +V      Y  ++R +
Sbjct: 248 FDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAHVHK--YAYTAVIRGF 305

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           CNE  + EA +V  +M   G+ PDV  Y  +   Y  +   D+A  V   M   G++ N 
Sbjct: 306 CNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAVYKSMISRGIKTNC 365

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
                I+    + G+  E +      KE G+  +   +N+L     ++   D    +L  
Sbjct: 366 VIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCKLGKVDDAVGMLDE 425

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           +K  +++ D+  Y+T++N +   G   + + +F +M + G KPD  AY++LA G+ R + 
Sbjct: 426 LKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRT 485

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
             +A +LL  M   G  PN      II G CS G ++ A E F+ +    V  +++ +  
Sbjct: 486 DFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTA 545

Query: 464 LMWGYSEARQPWRAEE------ILQIMKAFGVHPQKSTF 496
           L+ GY EA    ++ E      +L+ M    + P K  +
Sbjct: 546 LVNGYCEAALIEKSHELKEAFILLRTMLEMNMKPSKVMY 584



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 76/263 (28%), Positives = 134/263 (50%), Gaps = 5/263 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           ++  T L+N    +GKP EAQ++F  + E G KP +V Y  L A     +       +++
Sbjct: 435 MKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVAYNVLAAGFFRNRTDFEAMDLLN 494

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +E  G++P+S     +I     +G +EEA + F  +K   +  +   Y  L+ GY  A 
Sbjct: 495 YMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLKGESVEISVEIYTALVNGYCEAA 554

Query: 192 KPEESVKLLD--LMSR---EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
             E+S +L +  ++ R   E N+KP+   Y+ +  A C   N+  A  + +    +G  P
Sbjct: 555 LIEKSHELKEAFILLRTMLEMNMKPSKVMYSKIFTALCCNGNMEGAHTLFNLFIHTGFTP 614

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           D VTY  +   Y +     +A E+  +M+  G+ P+  T  I+I+GYCK   ++EA    
Sbjct: 615 DAVTYTIMINGYCKTNCLPEAHELFKDMKERGITPDAVTYTIMINGYCKMNCLREAHELF 674

Query: 307 RTMKEYGVHPNLVIFNLLIKGFV 329
           + MKE G+ P+++ + ++IKG +
Sbjct: 675 KDMKERGIKPDVIAYTVIIKGLL 697



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 86/480 (17%), Positives = 193/480 (40%), Gaps = 59/480 (12%)

Query: 83  IERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAAL---TIQKRFNSIHSIMSQVEENGM 138
           + +  P  A + F  L  + G   ++ TYT+++  L    + ++ +S+   +  ++ +  
Sbjct: 70  LYQNNPSLAYSYFTQLKNQHGFSHNIQTYTSIIRILCYYNLDRKLDSL--FLDIIDHSKQ 127

Query: 139 DP---DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           DP    ++ F+++    ++        + F     +G      + N  ++      +  +
Sbjct: 128 DPCFEINVLFDSLFEGVNDVNEDHYLFNAF-----NGFVKACVSQNMFVEAIDFLLQTRK 182

Query: 196 SVKLLDLMSREGNVKPNLRTYNVL-----------------------------------V 220
           +V +L          PN+ ++N L                                   +
Sbjct: 183 NVVIL----------PNILSFNFLINRLVKHDEVDMALCLFVRFKSFGLIFNEYTYTIVI 232

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           +A C + +      V  +M  +G+  D   Y T      +N  +D    V+ +       
Sbjct: 233 KALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCKNNRSDLGYAVLQDYRTRNAH 292

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
            +      +I G+C E K+ EA      M++ G+ P++ ++  L+ G+    + D    V
Sbjct: 293 VHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYVYCALVHGYCNSRNFDKALAV 352

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
              M    +  + + +S I++     G   +  ++F++  ++G+  D  AY+IL     +
Sbjct: 353 YKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFKESGLFIDRKAYNILFDALCK 412

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
             + + A  +L  +       ++  +TT+I+G+   G    A  +F +M E G  P++  
Sbjct: 413 LGKVDDAVGMLDELKSMQLDVDMKHYTTLINGYFLQGKPIEAQSLFKEMEERGFKPDVVA 472

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  L  G+   R  + A ++L  M++ GV P  +T  ++ E   + G  +EA+   + +K
Sbjct: 473 YNVLAAGFFRNRTDFEAMDLLNYMESQGVEPNSTTHKIIIEGLCSAGKVEEAEEFFNWLK 532



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 80/404 (19%), Positives = 164/404 (40%), Gaps = 63/404 (15%)

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
           K S   P  +T+  L K Y     P  +      +  +     N++TY  ++R  C    
Sbjct: 53  KISSFEP--NTFKILQKLYLYQNNPSLAYSYFTQLKNQHGFSHNIQTYTSIIRILC---- 106

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
               +N+  K+    +  D++ ++     +  N   D   E + ++  +    N      
Sbjct: 107 ---YYNLDRKL--DSLFLDIIDHSKQDPCFEINVLFDSLFEGVNDVNEDHYLFNA----- 156

Query: 289 IISGYCK----EGKIKEALRFA-RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
             +G+ K    +    EA+ F  +T K   + PN++ FN LI   V+    D VD  L L
Sbjct: 157 -FNGFVKACVSQNMFVEAIDFLLQTRKNVVILPNILSFNFLINRLVK---HDEVDMALCL 212

Query: 344 M---KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH----------- 389
               K F +  +  TY+ ++ A    G  +    +FD+M +AG+  D++           
Sbjct: 213 FVRFKSFGLIFNEYTYTIVIKALCKKGDWENVVRVFDEMKEAGVDDDSYCYATFIEGLCK 272

Query: 390 ------------------------AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
                                   AY+ + +G+  E + ++AE + + M + G  P+V +
Sbjct: 273 NNRSDLGYAVLQDYRTRNAHVHKYAYTAVIRGFCNETKLDEAESVFLEMEKQGLVPDVYV 332

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +  ++ G+C+  + D+A+ V+  M   G+  N   F  ++    E  +     ++ +  K
Sbjct: 333 YCALVHGYCNSRNFDKALAVYKSMISRGIKTNCVIFSCILHCLDEMGRALEVVDMFEEFK 392

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEME 529
             G+   +  + +L +A    G   +A  +L ++K+ +   +M+
Sbjct: 393 ESGLFIDRKAYNILFDALCKLGKVDDAVGMLDELKSMQLDVDMK 436


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 213/448 (47%), Gaps = 2/448 (0%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           RS   L++   + GK  + +  F ++I  G +P++ TY  ++  +  +    +   +  +
Sbjct: 96  RSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEE 155

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           ++  G+ PD++ +N++I+ F + G +++ +  F +MK+    P   TYN LI  +   GK
Sbjct: 156 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 215

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
               ++    M   G +KPN+ +Y+ LV A+C E  + +A      M   G+ P+  TY 
Sbjct: 216 LPIGLEFYREMKGNG-LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 274

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++  A  + G    A  +  EM   GV+ N  T   +I G C   ++KEA      M   
Sbjct: 275 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 334

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           GV PNL  +N LI GFV+  + D   E+L  +K   + PD++ Y T +    +   ++  
Sbjct: 335 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 394

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           K + ++M + GIK ++  Y+ L   Y +   P +   LL  M E      VV F  +I G
Sbjct: 395 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 454

Query: 433 WCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            C +  + +A++ F+++  + G+  N   F  ++ G  +  Q   A  + + M   G+ P
Sbjct: 455 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 514

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
            ++ +  L +     G   EA  +  K+
Sbjct: 515 DRTAYTSLMDGNFKQGNVLEALALRDKM 542



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 227/485 (46%), Gaps = 37/485 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   +++ + + G  + A+ +F  +   G  P  VTY +++       R +      
Sbjct: 129 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 188

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++++   +PD I +NA+IN F + G +   ++ + +MK +GL P   +Y+TL+  +   
Sbjct: 189 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 248

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  ++++K    M R G V PN  TY  L+ A C   N+++A+ + ++M   G++ +VVT
Sbjct: 249 GMMQQAIKFYVDMRRVGLV-PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 307

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +           +AEE+  +M+  GV PN  +   +I G+ K   +  AL     +K
Sbjct: 308 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 367

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG--- 367
             G+ P+L+++   I G   +   +    V+  MKE  +  + + Y+T+M+A+  +G   
Sbjct: 368 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 427

Query: 368 ----FMDKCKEI------------FDDMGKA-----------------GIKPDAHAYSIL 394
                +D+ KE+             D + K                  G++ +A  ++ +
Sbjct: 428 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 487

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G  ++ + E A  L   M++ G  P+   +T+++ G    G++  A+ + DKM E G+
Sbjct: 488 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 547

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
             +L  + +L+WG S   Q  +A   L+ M   G+HP +   + + +     G   EA  
Sbjct: 548 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 607

Query: 515 ILSKI 519
           + S +
Sbjct: 608 LQSYL 612



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/420 (25%), Positives = 200/420 (47%), Gaps = 2/420 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L + LI+ G  +EA   F+ +      P   +   LL       + + +      +   G
Sbjct: 66  LFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAG 125

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P    +N +I+   + G++E A   F +MK  GL P T TYN++I G+G  G+ +++V
Sbjct: 126 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 185

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
              + M ++   +P++ TYN L+  +C    +        +M  +G+KP+VV+Y+T+  A
Sbjct: 186 CFFEEM-KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 244

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G   QA +  V+M   G+ PN  T   +I   CK G + +A R    M + GV  N
Sbjct: 245 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 304

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +  LI G  +       +E+   M    V P++ +Y+ +++ +  A  MD+  E+ +
Sbjct: 305 VVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLN 364

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           ++   GIKPD   Y     G    ++ E A+ ++  M E G   N +I+TT++  +   G
Sbjct: 365 ELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSG 424

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL-QIMKAFGVHPQKSTF 496
           +    + + D+M E  +   + TF  L+ G  + +   +A +   +I   FG+    + F
Sbjct: 425 NPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIF 484



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 134/563 (23%), Positives = 246/563 (43%), Gaps = 67/563 (11%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI---------------FFN 146
           G K S+ +Y  +   L   + +   +S++ ++  +  D D                  F+
Sbjct: 5   GFKHSVESYCIVAHILFCARMYYDANSVLKEMVLSKADCDVFDVLWSTRNVCVPGFGVFD 64

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           A+ +   + G +EEA+  F KMK   + P T + N L+  +   GK ++  +    M   
Sbjct: 65  ALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGA 124

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +P + TYN+++   C E ++  A  +  +M   G+ PD VTYN++   + + G  D 
Sbjct: 125 G-ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDD 183

Query: 267 -----------------------------------AEEVIVEMEHNGVQPNGRTCGIIIS 291
                                                E   EM+ NG++PN  +   ++ 
Sbjct: 184 TVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVD 243

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
            +CKEG +++A++F   M+  G+ PN   +  LI    +I +      +   M +  V  
Sbjct: 244 AFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEW 303

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           +V+TY+ +++    A  M + +E+F  M  AG+ P+  +Y+ L  G+V+ +  ++A ELL
Sbjct: 304 NVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELL 363

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             +   G  P+++++ T I G CS   ++ A  V ++M E G+  N   + TLM  Y ++
Sbjct: 364 NELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKS 423

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAE 531
             P     +L  MK   +     TF +L +      L  +A    ++I N        A 
Sbjct: 424 GNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAI 483

Query: 532 EDIPVESLERLYHKEATTASYPNLLQ---IPN--VVSSDQKGSAAALKKGRML----LRD 582
               ++ L +    EA T  +  ++Q   +P+    +S   G+    K+G +L    LRD
Sbjct: 484 FTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGN---FKQGNVLEALALRD 540

Query: 583 --ADSSLECSWFATTSMY--LSH 601
             A+  ++    A TS+   LSH
Sbjct: 541 KMAEIGMKLDLLAYTSLVWGLSH 563



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 190/382 (49%), Gaps = 2/382 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + L+++  + G  Q+A   + ++   G  P+  TYT+L+ A       +    + +
Sbjct: 235 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 294

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G++ + + + A+I+   ++  M+EA + F KM  +G+ P  ++YN LI G+  A 
Sbjct: 295 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 354

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + +++LL+ +   G +KP+L  Y   +   C+ + I  A  VM++M   G+K + + Y
Sbjct: 355 NMDRALELLNELKGRG-IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 413

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR-FARTMK 310
            T+  AY ++G   +   ++ EM+   ++    T  ++I G CK   + +A+  F R   
Sbjct: 414 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 473

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           ++G+  N  IF  +I G  +    +    +   M +  + PD   Y+++M+     G + 
Sbjct: 474 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 533

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   + D M + G+K D  AY+ L  G     + +KA   L  MI  G HP+ V+  +++
Sbjct: 534 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 593

Query: 431 SGWCSDGSMDRAIEVFDKMCEH 452
                 G +D A+E+   + +H
Sbjct: 594 KKHYELGCIDEAVELQSYLMKH 615


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 99/397 (24%), Positives = 196/397 (49%), Gaps = 4/397 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ S   L+++L++  +  E Q ++  +I+   +P+L T+   +  L    + N    ++
Sbjct: 164 SLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVI 223

Query: 131 SQVEENGMDPDSIFFNAVINAFSE---SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
             ++  G  P+ + +N +I+   +   +G M  A     +M  + + P   T+NTLI G+
Sbjct: 224 EDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGF 283

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
                   +    + M R+G +KPN+ TYN L+    N   + EA  +  KM   G+KP+
Sbjct: 284 CKDENVLAAKNAFEEMQRQG-LKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPN 342

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           +VT+N +   + +     +A ++  ++    + PN  T   +I  +CK G ++E      
Sbjct: 343 IVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHN 402

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
           +M + G+ PN+  +N LI G     +     ++L  M+ + +  DV+TY+ ++  W   G
Sbjct: 403 SMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDG 462

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
              K +++  +M   G+KP+   Y+ L  GY  E   + A ++   M + G   NVV + 
Sbjct: 463 EPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYN 522

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            +I G+C  G ++ A  + ++M E G++PN  T++ +
Sbjct: 523 VLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVV 559



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/483 (25%), Positives = 233/483 (48%), Gaps = 12/483 (2%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKP---SLVTYTTLLAALTIQK 121
           N +    VRS    ++ L++  K     ++F++L+ GG +P   +L+T   +LA +T   
Sbjct: 90  NSKKYSKVRS---FLDKLVKNEK-HTVSSVFHSLLLGGDRPCANALITDMLVLAYVT-NL 144

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
             +S   +  +V++ G        N +++A  +     E    + +M +  + P  +T+N
Sbjct: 145 EIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFN 204

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN---VMHK 238
             I G   AGK  ++  +++ +   G   PN+ TYN L+   C + +  + +    ++ +
Sbjct: 205 IFINGLCKAGKLNKAEDVIEDIKAWG-FSPNIVTYNTLIDGHCKKGSAGKMYRADAILKE 263

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M A+ + P+ +T+NT+   + ++     A+    EM+  G++PN  T   +I+G    GK
Sbjct: 264 MLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGK 323

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           + EA+     M   G+ PN+V FN LI GF +        ++   + E  + P+ IT++T
Sbjct: 324 LDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNT 383

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++A+  AG M++   + + M   GI P+   Y+ L  G  R Q    A++LL  M    
Sbjct: 384 MIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYE 443

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
              +VV +  +I GWC DG   +A ++  +M   GV PN  T+ TLM GY        A 
Sbjct: 444 LKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAAL 503

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVES 538
           ++   M+  G      T+ +L +    TG  ++A R+L+++  K         + + +E 
Sbjct: 504 KVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEM 563

Query: 539 LER 541
           LE+
Sbjct: 564 LEK 566



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 91/279 (32%), Positives = 153/279 (54%), Gaps = 1/279 (0%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+  F  +   G KP++VTY +L+  L+   + +   ++  ++   G+ P+ + FNA+IN
Sbjct: 292 AKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALIN 351

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            F +   ++EA   F  + E  L P   T+NT+I  +  AG  EE   L + M  EG + 
Sbjct: 352 GFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEG-IF 410

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN+ TYN L+   C  +N+  A  ++++M    +K DVVTYN +   + ++GE  +AE++
Sbjct: 411 PNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKL 470

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + EM + GV+PN  T   ++ GYC EG +K AL+    M++ G   N+V +N+LIKGF +
Sbjct: 471 LGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCK 530

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
               +  + +L  M E  +NP+  TY  +       GF+
Sbjct: 531 TGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFI 569


>gi|255547341|ref|XP_002514728.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546332|gb|EEF47834.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 517

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 208/408 (50%), Gaps = 14/408 (3%)

Query: 112 TLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES 171
           TLL + T ++  + + + +SQ+  +  +P    F  +I AFSE G ++EA+  + K+   
Sbjct: 91  TLLQSCTPRRVNSLVFNALSQLRGSKFNPS--VFGVLIIAFSEVGLVDEALRVYLKV--- 145

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLD-LMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
           G  P     N L+ G       +   +L + ++SR   + P + TYNVLV A C + ++ 
Sbjct: 146 GAFPAVQACNALLNGLLKKSSFDIMWELYNNMVSRR--LFPTVVTYNVLVDACCRQGDVL 203

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
            A +++ +M   G++P VV Y T+        +  +AE +  +M+ +GV PN  T  +++
Sbjct: 204 RAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLM 263

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
            GYCK   +K+AL   + M + G+ PN+V F +LI    ++ +          M +F V 
Sbjct: 264 DGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVV 323

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P+V+ ++++++ +S AG   +  ++  +M K  I PD   YSIL K   R    E+A+++
Sbjct: 324 PNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDI 383

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV------FDKMCEHGVSPNLKTFETL 464
           L  M + G   N V++ ++I G+C +G+M++A+E+      F  M  +G+ P+   +  +
Sbjct: 384 LKRMEKEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVM 443

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           + G+  A+       +   M   G+ P + T  ++    +  G  K A
Sbjct: 444 LQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGYQDNGYLKSA 491



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 94/372 (25%), Positives = 182/372 (48%), Gaps = 30/372 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++   L+N L+++        ++NN++     P++VTY  L+ A   Q       S++S
Sbjct: 151 VQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLIS 210

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G++P  + +  +I+       + EA   F +MK+SG+ P   TYN L+ GY    
Sbjct: 211 EMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTA 270

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++++ L   M  +G ++PN+ T+ +L+ A C  + +  A     +MA  G+ P+VV +
Sbjct: 271 NVKQALHLYQGMLDDG-LQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVF 329

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++   Y++ G   +A ++++EME   + P+  T  I+I   C+ G ++EA    + M++
Sbjct: 330 NSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRMEK 389

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV  N V++N LI G+ +  + +   E+                              K
Sbjct: 390 EGVPANSVVYNSLIDGYCKEGNMEKALEIF-----------------------------K 420

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             + F DM + G++PDA AY+++ +G++  +       L   MI+ G  PN V    +  
Sbjct: 421 ATKFFSDMRRNGLRPDALAYAVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRR 480

Query: 432 GWCSDGSMDRAI 443
           G+  +G +  A+
Sbjct: 481 GYQDNGYLKSAL 492



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 76/334 (22%), Positives = 159/334 (47%), Gaps = 42/334 (12%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+++   +G    A+++ + +++ G +P++V YTTL+  L  + +     S+ 
Sbjct: 185 TVVTYNVLVDACCRQGDVLRAKSLISEMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMF 244

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            Q++++G+ P+   +N +++ + ++ N+++A+  +  M + GL P               
Sbjct: 245 RQMKDSGVFPNLYTYNVLMDGYCKTANVKQALHLYQGMLDDGLQP--------------- 289

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
                                N+ T+ +L+ A C  + +  A     +MA  G+ P+VV 
Sbjct: 290 ---------------------NVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVV 328

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +N++   Y++ G   +A ++++EME   + P+  T  I+I   C+ G ++EA    + M+
Sbjct: 329 FNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRME 388

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR------VNPDVITYSTIMNAWS 364
           + GV  N V++N LI G+ +  + +   E+    K F       + PD + Y+ ++    
Sbjct: 389 KEGVPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAYAVMLQGHL 448

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            A  M     +  DM K GI P+     ++ +GY
Sbjct: 449 NAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGY 482



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/298 (23%), Positives = 140/298 (46%), Gaps = 6/298 (2%)

Query: 224 CNEKNITE-AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
           C  + +    +N + ++  S   P V  +  +  A+++ G  D+A  V +++   G  P 
Sbjct: 96  CTPRRVNSLVFNALSQLRGSKFNPSV--FGVLIIAFSEVGLVDEALRVYLKV---GAFPA 150

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
            + C  +++G  K+            M    + P +V +N+L+       D      +++
Sbjct: 151 VQACNALLNGLLKKSSFDIMWELYNNMVSRRLFPTVVTYNVLVDACCRQGDVLRAKSLIS 210

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M +  + P V+ Y+T+++   +   + + + +F  M  +G+ P+ + Y++L  GY +  
Sbjct: 211 EMVKKGIEPTVVIYTTLIHGLCSESKLMEAESMFRQMKDSGVFPNLYTYNVLMDGYCKTA 270

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             ++A  L   M++ G  PNVV F  +I   C    +  A   F +M + GV PN+  F 
Sbjct: 271 NVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFGVVPNVVVFN 330

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +L+ GYS+A     A ++L  M+ F + P   T+ +L +     G  +EA  IL +++
Sbjct: 331 SLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEADDILKRME 388



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 118/240 (49%), Gaps = 7/240 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LM+   +    ++A  ++  +++ G +P++VT+  L+ AL   +   +      Q+ + G
Sbjct: 262 LMDGYCKTANVKQALHLYQGMLDDGLQPNVVTFGILIDALCKVRELLAARRFFVQMAKFG 321

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ + FN++I+ +S++GN  EA D   +M++  ++P   TY+ LIK     G  EE+ 
Sbjct: 322 VVPNVVVFNSLIDGYSKAGNCSEATDLLLEMEKFKISPDVFTYSILIKNACRLGTVEEAD 381

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH------KMAASGMKPDVVTY 251
            +L  M +EG V  N   YN L+  +C E N+ +A  +         M  +G++PD + Y
Sbjct: 382 DILKRMEKEG-VPANSVVYNSLIDGYCKEGNMEKALEIFKATKFFSDMRRNGLRPDALAY 440

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +   +           +  +M   G+ PN  T  ++  GY   G +K AL  +R + E
Sbjct: 441 AVMLQGHLNAKHMADVMMLHADMIKMGIVPNEVTSQVVRRGYQDNGYLKSALWCSRDLTE 500


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 207/425 (48%), Gaps = 4/425 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G  + A  +F  L   G  P+L T+ T++     +  F +   ++S+V+E G+     F 
Sbjct: 254 GDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFL 313

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +I+A    G   +  ++   +  +   P  +TYN LI      GK E +V  LD  S+
Sbjct: 314 NNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASK 373

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G + PN  +Y  L++A+C  K    A  ++ +MA  G KPD+VTY  +      +G  D
Sbjct: 374 KGLI-PNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMD 432

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A  + V++   GV P+     +++SG CK G+   A      M +  + P+  ++  LI
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLI 492

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF+   D D   +V +L  E  V  DV+ ++ ++  +  +G +D+     + M +  + 
Sbjct: 493 DGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV 552

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   YS +  GYV++Q+   A ++   M ++   PNVV +T++I+G+C  G    A E 
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEET 612

Query: 446 FDKMCEHGVSPNLKTFETLMWGYS-EARQPWRAEEILQIMKAFGVHPQKSTF--LLLAEA 502
           F +M    + PN+ T+ TL+   + E+    +A    ++M      P + TF  LL    
Sbjct: 613 FKEMQLRDLVPNVVTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFV 672

Query: 503 RRATG 507
           ++ +G
Sbjct: 673 KKTSG 677



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/487 (23%), Positives = 217/487 (44%), Gaps = 14/487 (2%)

Query: 67  ESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           +S   V +   L++ L++  +  +A+ +++ + + G      +   L+  +  + +    
Sbjct: 165 DSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCILVKGMCNEGKVEVG 224

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
             ++      G  P+ +F+N +I  + + G++E A   F ++K  G  PT  T+ T+I G
Sbjct: 225 RKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMING 284

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
           +   G    S +LL  +   G ++ ++   N ++ A        +    +  + A+  KP
Sbjct: 285 FCKEGDFVASDRLLSEVKERG-LRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKP 343

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           DV TYN +     + G+ + A   + E    G+ PN  +   +I  YCK  +   A +  
Sbjct: 344 DVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLL 403

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             M E G  P++V + +LI G V     D    +   + +  V+PD   Y+ +M+     
Sbjct: 404 LQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G     K +F +M    I PDA+ Y+ L  G++R  + ++A ++    +E G   +VV  
Sbjct: 464 GRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
             +I G+C  G +D A+   ++M E  + P+  T+ T++ GY + +    A +I + M+ 
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK 583

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP----VESLERL 542
               P   T+  L       G  K A         +E   EM+  + +P      +L R 
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMA---------EETFKEMQLRDLVPNVVTYTTLIRS 634

Query: 543 YHKEATT 549
             KE++T
Sbjct: 635 LAKESST 641



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 99/408 (24%), Positives = 188/408 (46%), Gaps = 2/408 (0%)

Query: 111 TTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF-WKMK 169
           ++ L  L   + FN I  ++  +    +       + V++A++ESG++ +A++ + + ++
Sbjct: 103 SSFLKLLARYRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGSLSKAVEIYDYVVE 162

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
                P     N+L+     + +  ++ K+ D M   G+   N  T  +LV+  CNE  +
Sbjct: 163 LYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTC-ILVKGMCNEGKV 221

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
                ++      G  P++V YNTI   Y + G+ + A  V  E++  G  P   T G +
Sbjct: 222 EVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTM 281

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           I+G+CKEG    + R    +KE G+  ++   N +I        +    E +  +     
Sbjct: 282 INGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDC 341

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            PDV TY+ ++N     G  +      D+  K G+ P+  +Y+ L + Y + +E + A +
Sbjct: 342 KPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASK 401

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           LL+ M E G  P++V +  +I G    G MD A+ +  K+ + GVSP+   +  LM G  
Sbjct: 402 LLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           +  +   A+ +   M    + P    +  L +    +G   EA+++ S
Sbjct: 462 KTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFS 509



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 214/485 (44%), Gaps = 29/485 (5%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N L + GK + A    +   + G  P+ ++Y  L+ A    K ++    ++ 
Sbjct: 345 VATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLL 404

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ E G  PD + +  +I+    SG+M++A++   K+ + G++P  + YN L+ G    G
Sbjct: 405 QMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTG 464

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +   + KLL     + N+ P+   Y  L+  +    +  EA  V       G+K DVV +
Sbjct: 465 RFLPA-KLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHH 523

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   + ++G  D+A   +  M    + P+  T   II GY K+  +  A++  R M++
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEK 583

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST-AGFMD 370
               PN+V +  LI GF    D    +E    M+   + P+V+TY+T++ + +  +  ++
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESSTLE 643

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ------EPEKA--------EELLMTMIE 416
           K    ++ M      P+   ++ L +G+V++       EP+ +         E    M  
Sbjct: 644 KAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSEFFHRMKS 703

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA--RQP 474
            G+  +   + + +   C  G +  A    DKM + G SP+  +F  ++ G+      + 
Sbjct: 704 DGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDPVSFAAILHGFCVVGNSKQ 763

Query: 475 WRAEEILQI-MKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEED 533
           WR  +   +  K   V  + S  L   E      +  EA  IL  +  K  T E      
Sbjct: 764 WRNMDFCNLGEKGLEVAVRYSQVL---EQHLPQPVICEASTILHAMVEKADTKE------ 814

Query: 534 IPVES 538
            PVES
Sbjct: 815 -PVES 818



 Score = 45.8 bits (107), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 51/232 (21%), Positives = 95/232 (40%), Gaps = 36/232 (15%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL----- 117
           M K  C+  V + T L+N    +G  + A+  F  +      P++VTYTTL+ +L     
Sbjct: 581 MEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTTLIRSLAKESS 640

Query: 118 TIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAF--------------SESGNMEEAMD 163
           T++K       +M+    N   P+ + FN ++  F              S  G      +
Sbjct: 641 TLEKAVYYWELMMT----NKCVPNEVTFNCLLQGFVKKTSGKVLAEPDGSNHGQSSLFSE 696

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
            F +MK  G +   + YN+ +    + G  + +    D M ++G   P+  ++  ++  +
Sbjct: 697 FFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKG-FSPDPVSFAAILHGF 755

Query: 224 CNEKNITEAWNVMH--KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
           C   N ++ W  M    +   G++        +A  Y+Q  E    + VI E
Sbjct: 756 CVVGN-SKQWRNMDFCNLGEKGLE--------VAVRYSQVLEQHLPQPVICE 798


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 227/487 (46%), Gaps = 36/487 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++  +++  L +     +A+ ++  + + G KP++VTY T+L +   + R +    ++S
Sbjct: 180 VKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLS 239

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++E G  P+ + +N ++N  S+ G +E+A     +M  SGL  +  TYN LI G+   G
Sbjct: 240 EMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKG 299

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E+  L++ M       P L TYN L+   C    +T        M  S   PD+V++
Sbjct: 300 LFVEAFDLVEEMVNR-RAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSF 358

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++   Y + G   +A  +  E++   + P   T   +I G C  G +  ALR  + M +
Sbjct: 359 NSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTD 418

Query: 312 YGVHPNLVIFNLLIKGFVEI----MDRDGVDEVLA-------------LMKEFRVN---- 350
            G+ P++  + +L+ G  ++    M R   +E+L+             ++ E ++     
Sbjct: 419 QGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSV 478

Query: 351 --------------PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
                         PDVITY+  ++A    G  ++  ++ ++M   G+ PD   Y+ +  
Sbjct: 479 AFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIIN 538

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G+V+     KA E+   M+  G  P+VV +T +I    +   +D A   F KM E  V  
Sbjct: 539 GFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPA 598

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N+ T+  ++ G    R+   A +    M+  G+ P K ++ +L       G  +EA R+ 
Sbjct: 599 NVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLY 658

Query: 517 SKIKNKE 523
            ++ +++
Sbjct: 659 REMLDRK 665



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 176/380 (46%), Gaps = 1/380 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   ++G   EA  +   ++     P+L TY TL+  L    +   +    S + ++ 
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + FN+++  +  +G + EA   F ++K   L PT  TYNTLI G  + G  + ++
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L   M+ +G + P++ TY +LV        ++ A    ++M + G+KPD   YNT    
Sbjct: 411 RLKKEMTDQG-LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG 469

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +  +   A  +  EM   G  P+  T  + +   C++G  +EA      M   G+ P+
Sbjct: 470 EMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPD 529

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +  +I GFV+        EV   M    V P V+TY+ +++A +    +D     F 
Sbjct: 530 HVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFS 589

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M +  +  +   Y+ +  G    +  ++A +    M E G  PN   +T +I+  C+ G
Sbjct: 590 KMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMG 649

Query: 438 SMDRAIEVFDKMCEHGVSPN 457
             + A+ ++ +M +  + P+
Sbjct: 650 YWEEALRLYREMLDRKIQPD 669



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 153/337 (45%), Gaps = 1/337 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   L+      G   EA  +F+ L      P+++TY TL+  L +    ++   +  
Sbjct: 355 IVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKK 414

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G+ PD   +  ++N   + G +  A   F +M   GL P    YNT I G     
Sbjct: 415 EMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIA 474

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               +  + + M   G   P++ TYNV V A C + N  EA +++  M + G+ PD VTY
Sbjct: 475 DTSVAFSMQEEMLAAG-FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTY 533

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            +I   + +NG   +A EV  EM   GV P+  T  ++I  +  +  +  A  +   M E
Sbjct: 534 TSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLE 593

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             V  N++ +N +I G       D   +    M+E  + P+  +Y+ ++N     G+ ++
Sbjct: 594 KSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEE 653

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
              ++ +M    I+PD+  +S+  K   R+ +    +
Sbjct: 654 ALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQ 690



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/429 (22%), Positives = 180/429 (41%), Gaps = 71/429 (16%)

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
            F KM  +GL P     N +++         ++  +  +M + G +KP + TYN ++ ++
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFG-IKPTVVTYNTMLDSY 225

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C E  + +A  ++ +M   G  P+ VTYN +    ++ GE +QA+ +I EM ++G+  + 
Sbjct: 226 CKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSA 285

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV------ 337
            T   +I+G+C++G   EA      M      P L  +N L+ G  + +   GV      
Sbjct: 286 YTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSD 345

Query: 338 --------------------------DEVLALMKEFRVN---PDVITYSTIMNAWSTAGF 368
                                      E   L  E +     P VITY+T+++     G+
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSIL------------AKGYVREQ-----EPEK----- 406
           +D    +  +M   G+ PD   Y+IL            A+G+  E      +P++     
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT 465

Query: 407 -------------AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
                        A  +   M+ +GF P+V+ +   +   C  G+ + A ++ + M   G
Sbjct: 466 RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG 525

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           + P+  T+ +++ G+ +     +A E+   M + GV P   T+ +L  A  A  +   A 
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAF 585

Query: 514 RILSKIKNK 522
              SK+  K
Sbjct: 586 MYFSKMLEK 594



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 128/282 (45%), Gaps = 1/282 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T L+N   + G    A+  FN ++  G KP    Y T +         +   S+  
Sbjct: 425 IFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSVAFSMQE 484

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  PD I +N  ++A  + GN EEA D    M   GL P   TY ++I G+   G
Sbjct: 485 EMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIINGFVKNG 544

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              ++ ++ + M  +G V P++ TY VL+ A   ++ +  A+    KM    +  +V+TY
Sbjct: 545 HLRKAREVFNEMLSKG-VAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPANVITY 603

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N I          D+A +   EME  G+ PN  +  I+I+  C  G  +EALR  R M +
Sbjct: 604 NAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLYREMLD 663

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
             + P+    ++ +K          V  V +L++    N +V
Sbjct: 664 RKIQPDSFTHSVFLKNLHRDYQVHAVQCVESLIQNVEDNINV 705



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 76/152 (50%)

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
           C  +FD M + G+ PD    + + +    E    KA+ +   M + G  P VV + T++ 
Sbjct: 164 CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLD 223

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            +C +G +D+A+E+  +M E G  PN  T+  L+ G S+  +  +A+ +++ M   G++ 
Sbjct: 224 SYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNV 283

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
              T+  L       GL  EA  ++ ++ N+ 
Sbjct: 284 SAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 217/456 (47%), Gaps = 50/456 (10%)

Query: 61  SFCMNKE---SCRTVRSMTK------------LMNSLIERGKPQEAQAIFNNLIEGGHKP 105
           +FCM  E   +C  +R MTK            L+++L E  +  EA  +   +   G +P
Sbjct: 209 AFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEP 268

Query: 106 SLVTYTTLLAALTIQKRFNS-----------------------IHSI--MSQVEENGM-- 138
            + T+  ++  L    R +                        +H +  M +V+E     
Sbjct: 269 DVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARAML 328

Query: 139 ----DPDSIFFNAVINAFSESGNMEEAMDTFWK-MKESGLTPTTSTYNTLIKGYGIAGKP 193
               +P+++ +N +IN +  SG  EEA D  +K M  +G  P   T+N +I G    G  
Sbjct: 329 SKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYL 388

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +++ LD M ++G  +PN+ TY +L+  +C + +  EA  V++ M+A G+  + V YN 
Sbjct: 389 VSALEFLDEMVKKG-FEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNC 447

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  A  ++G+   A ++  EM   G +P+  T   +I G CK  K++EAL   R M   G
Sbjct: 448 LIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEG 507

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP-DVITYSTIMNAWSTAGFMDKC 372
           V  N V +N LI  F+ +      D+++  M+ FR  P D ITY+ ++ A    G  +KC
Sbjct: 508 VIANTVTYNTLIHAFLRLELIQQADKLVGEMR-FRGCPLDNITYNGLIKALCKTGATEKC 566

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             + + M    I P  ++ +IL   + R  +   A + L  MI+ G  P++V + ++I+G
Sbjct: 567 LGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            C  G    A+ +F+ +   G+ P+  T+ TL+  Y
Sbjct: 627 LCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRY 662



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 176/339 (51%), Gaps = 9/339 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L ++G    A    + +++ G +P+++TYT L+     Q  F     +++ +   G
Sbjct: 378 MIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKG 437

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  +++ +N +I A  + G +++A+  + +M   G  P   T+N+LI G     K EE++
Sbjct: 438 LSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEAL 497

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M  EG V  N  TYN L+ A+   + I +A  ++ +M   G   D +TYN +  A
Sbjct: 498 GLYRDMLLEG-VIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKA 556

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G  ++   +I +M    + P+  +C I+I+ +C+ GK+ +AL+F R M + G+ P+
Sbjct: 557 LCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPD 616

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG-FMDKCK 373
           +V +N LI G  + M R    E L L    +   ++PD +TY+T+++ +   G F D C+
Sbjct: 617 IVTYNSLINGLCK-MGR--FQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQ 673

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
            +F  +   G  P+   +SIL   +V+     +   +LM
Sbjct: 674 LLFKGVSN-GFIPNEITWSILINYFVKNNSDSEQFTILM 711



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/489 (22%), Positives = 220/489 (44%), Gaps = 43/489 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T +S   ++  L+    P+ A  +F +++  G  P++ T+  ++ A  +    +S  S++
Sbjct: 164 TFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLL 223

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + ++G  P+SI +  +I+A SE+  + EAM    +M   G  P   T+N +I G   A
Sbjct: 224 RDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKA 283

Query: 191 GKPEESVKLLD-LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           G+  E+ KL D ++ R+      ++ Y  L+   C    + EA  ++ K+      P+ V
Sbjct: 284 GRIHEAAKLHDRMLLRDFTADALIQGY--LMHGLCRMGKVDEARAMLSKIP----NPNTV 337

Query: 250 TYNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            YNT+   Y  +G  ++A++++ + M   G +P+  T  I+I G CK+G +  AL F   
Sbjct: 338 LYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDE 397

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M + G  PN++ + +LI GF +    +   +V+  M    ++ + + Y+ ++ A    G 
Sbjct: 398 MVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGK 457

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +    +++ +M   G KPD + ++ L  G  +  + E+A  L   M+  G   N V + T
Sbjct: 458 IQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNT 517

Query: 429 IISGW-----------------------------------CSDGSMDRAIEVFDKMCEHG 453
           +I  +                                   C  G+ ++ + + ++M    
Sbjct: 518 LIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEE 577

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           + P++ +   L+  +    +   A + L+ M   G+ P   T+  L       G  +EA 
Sbjct: 578 IFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEAL 637

Query: 514 RILSKIKNK 522
            + + ++ K
Sbjct: 638 NLFNGLQAK 646



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 174/362 (48%), Gaps = 2/362 (0%)

Query: 78  LMNSLIERGKPQEAQ-AIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           L+N  +  G+ +EA+  ++ N++  G +P   T+  ++  L  +    S    + ++ + 
Sbjct: 342 LINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKK 401

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G +P+ I +  +I+ F + G+ EEA      M   GL+  T  YN LI      GK +++
Sbjct: 402 GFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDA 461

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +++   MS +G  KP++ T+N L+   C    + EA  +   M   G+  + VTYNT+  
Sbjct: 462 LQMYGEMSSKG-CKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIH 520

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A+ +     QA++++ EM   G   +  T   +I   CK G  ++ L     M    + P
Sbjct: 521 AFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFP 580

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++   N+LI  F      +   + L  M +  + PD++TY++++N     G   +   +F
Sbjct: 581 SINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLF 640

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           + +   GI PDA  Y+ L   Y  E     A +LL   + +GF PN + ++ +I+ +  +
Sbjct: 641 NGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKN 700

Query: 437 GS 438
            S
Sbjct: 701 NS 702



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 171/368 (46%), Gaps = 44/368 (11%)

Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-------------------------- 200
           +MK+ G     S +  +++ YG AG P ++ +LL                          
Sbjct: 119 QMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAG 178

Query: 201 -----------DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
                      D++SR   + P + T+ V+++A+C    +  A +++  M   G  P+ +
Sbjct: 179 NCPKVAPNVFYDMLSR--GISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSI 236

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y  +  A ++N   ++A +++ EM   G +P+ +T   +I G CK G+I EA +    M
Sbjct: 237 IYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRM 296

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
                  + +I   L+ G   +     VDE  A++ +   NP+ + Y+T++N +  +G  
Sbjct: 297 LLRDFTADALIQGYLMHGLCRM---GKVDEARAMLSKIP-NPNTVLYNTLINGYVVSGRF 352

Query: 370 DKCKE-IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           ++ K+ ++ +M  AG +PDA  ++I+  G  ++     A E L  M++ GF PNV+ +T 
Sbjct: 353 EEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTI 412

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G+C  G  + A +V + M   G+S N   +  L+    +  +   A ++   M + G
Sbjct: 413 LIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKG 472

Query: 489 VHPQKSTF 496
             P   TF
Sbjct: 473 CKPDIYTF 480



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/251 (25%), Positives = 123/251 (49%), Gaps = 4/251 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+ + C+  + +   L+  L +  K +EA  ++ +++  G   + VTY TL+ A    + 
Sbjct: 468 MSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLEL 527

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 ++ ++   G   D+I +N +I A  ++G  E+ +    +M    + P+ ++ N 
Sbjct: 528 IQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNI 587

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI  +   GK  ++++ L  M + G + P++ TYN L+   C      EA N+ + + A 
Sbjct: 588 LINSFCRTGKVNDALQFLRDMIQRG-LTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAK 646

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ PD VTYNT+ + Y   G  + A +++ +   NG  PN  T  I+I+ + K     E 
Sbjct: 647 GIHPDAVTYNTLISRYCYEGLFNDACQLLFKGVSNGFIPNEITWSILINYFVKNNSDSE- 705

Query: 303 LRFARTMKEYG 313
            +F   M  +G
Sbjct: 706 -QFTILMGNWG 715



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/207 (22%), Positives = 87/207 (42%), Gaps = 1/207 (0%)

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           ++ LLI     + +   +D++L  MK+         +  IM  +  AG   +   +  DM
Sbjct: 96  VYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPGQATRLLLDM 155

Query: 380 -GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
            G    +P   +Y+++ +  V    P+ A  +   M+  G  P V  F  ++  +C    
Sbjct: 156 WGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVVMKAFCMVNE 215

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +D A  +   M +HG  PN   ++ L+   SE  +   A ++L+ M   G  P   TF  
Sbjct: 216 VDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFND 275

Query: 499 LAEARRATGLTKEAKRILSKIKNKERT 525
           +       G   EA ++  ++  ++ T
Sbjct: 276 VIHGLCKAGRIHEAAKLHDRMLLRDFT 302


>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 210/423 (49%), Gaps = 3/423 (0%)

Query: 82  LIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDP 140
           L++ G  ++   ++N +  EG   P  VTY+ L+AA     R +S  S+  +++ENG+ P
Sbjct: 204 LMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHP 263

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
            +  +  ++  + + G +E+A+    +MKE G   T  TY  LIKG G AGK EE+  + 
Sbjct: 264 TAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIF 323

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA-YA 259
             M +EG  KP++   N L+        + +A  +  +M +    P+VVTYNT+  A + 
Sbjct: 324 MNMLKEG-CKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFE 382

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
               A +A     +M+ NGV P+  T  I+I G+CK  ++++AL     M E G  P   
Sbjct: 383 SKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPA 442

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            +  LI    +    +  +E+   ++E         Y+ ++      G + +  ++F++M
Sbjct: 443 AYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEM 502

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            K G  PD +AY+ L  G VR    ++A  LL TM E+G  P++     I++G+   G  
Sbjct: 503 KKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGP 562

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             AIE+F +M    + P++ ++ T++   S A     A ++++ M + G      T+  +
Sbjct: 563 KGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSI 622

Query: 500 AEA 502
            EA
Sbjct: 623 LEA 625



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 172/373 (46%), Gaps = 1/373 (0%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
            + ++    ++  + +A+  F+++K     PT++TYN++I      G  E+  +L + M 
Sbjct: 162 LSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMC 221

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
            EG+  P+  TY+ L+ A+        A ++  +M  +G+ P    Y TI   Y + G  
Sbjct: 222 NEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRV 281

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           ++A  ++ EM+  G      T   +I G  K GK++EA      M + G  P++V+ N L
Sbjct: 282 EKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNL 341

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA-WSTAGFMDKCKEIFDDMGKAG 383
           I    +        ++   M+  +  P+V+TY+T++ A + +     +    ++ M + G
Sbjct: 342 INLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENG 401

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           + P +  YSIL  G+ +    EKA  LL  M E GF P    + ++I+        + A 
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAAN 461

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           E+F ++ E+    + + +  ++    +  +   A ++   MK  G +P    +  L    
Sbjct: 462 ELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGM 521

Query: 504 RATGLTKEAKRIL 516
              G+T EA  +L
Sbjct: 522 VRVGMTDEAHSLL 534


>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 210/423 (49%), Gaps = 3/423 (0%)

Query: 82  LIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDP 140
           L++ G  ++   ++N +  EG   P  VTY+ L+AA     R +S  S+  +++ENG+ P
Sbjct: 204 LMQEGHHEKVHELYNEMCNEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHP 263

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
            +  +  ++  + + G +E+A+    +MKE G   T  TY  LIKG G AGK EE+  + 
Sbjct: 264 TAKIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIF 323

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA-YA 259
             M +EG  KP++   N L+        + +A  +  +M +    P+VVTYNT+  A + 
Sbjct: 324 MNMLKEG-CKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFE 382

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
               A +A     +M+ NGV P+  T  I+I G+CK  ++++AL     M E G  P   
Sbjct: 383 SKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPA 442

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            +  LI    +    +  +E+   ++E         Y+ ++      G + +  ++F++M
Sbjct: 443 AYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEM 502

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            K G  PD +AY+ L  G VR    ++A  LL TM E+G  P++     I++G+   G  
Sbjct: 503 KKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGP 562

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             AIE+F +M    + P++ ++ T++   S A     A ++++ M + G      T+  +
Sbjct: 563 KGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSI 622

Query: 500 AEA 502
            EA
Sbjct: 623 LEA 625



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/415 (22%), Positives = 186/415 (44%), Gaps = 7/415 (1%)

Query: 111 TTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM-K 169
           + ++  L   K  N   SI  Q++     P S  +N++I    + G+ E+  + + +M  
Sbjct: 163 SEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCN 222

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
           E    P T TY+ LI  +G  G+ + ++ L D M +E  + P  + Y  ++  +     +
Sbjct: 223 EGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEM-KENGLHPTAKIYTTILGIYFKLGRV 281

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
            +A  ++ +M   G    V TY  +     + G+ ++A  + + M   G +P+      +
Sbjct: 282 EKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNL 341

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKE 346
           I+   K G++ +A++    M+     PN+V +N +IK   E   R    E       MKE
Sbjct: 342 INLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKAR--ASEAFLWYEKMKE 399

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             V P   TYS +++ +     ++K   + ++M + G  P   AY  L     + +  E 
Sbjct: 400 NGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEA 459

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A EL   + E+  + +  ++  +I      G +  A+++F++M + G +P++  +  LM 
Sbjct: 460 ANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMS 519

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           G         A  +L+ M+  G  P  ++  ++      TG  K A  + +++KN
Sbjct: 520 GMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKN 574



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/373 (23%), Positives = 172/373 (46%), Gaps = 1/373 (0%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
            + ++    ++  + +A+  F+++K     PT++TYN++I      G  E+  +L + M 
Sbjct: 162 LSEIVKVLGKAKMVNKALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMC 221

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
            EG+  P+  TY+ L+ A+        A ++  +M  +G+ P    Y TI   Y + G  
Sbjct: 222 NEGDCLPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRV 281

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           ++A  ++ EM+  G      T   +I G  K GK++EA      M + G  P++V+ N L
Sbjct: 282 EKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNL 341

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA-WSTAGFMDKCKEIFDDMGKAG 383
           I    +        ++   M+  +  P+V+TY+T++ A + +     +    ++ M + G
Sbjct: 342 INLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENG 401

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           + P +  YSIL  G+ +    EKA  LL  M E GF P    + ++I+        + A 
Sbjct: 402 VVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAAN 461

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           E+F ++ E+    + + +  ++    +  +   A ++   MK  G +P    +  L    
Sbjct: 462 ELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGM 521

Query: 504 RATGLTKEAKRIL 516
              G+T EA  +L
Sbjct: 522 VRVGMTDEAHSLL 534



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/265 (22%), Positives = 125/265 (47%), Gaps = 3/265 (1%)

Query: 72  VRSMTKLMNSLIE-RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           V +   ++ +L E + +  EA   +  + E G  PS  TY+ L+       R      ++
Sbjct: 370 VVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLL 429

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++E G  P    + ++INA  ++   E A + F +++E+    +   Y  +IK  G  
Sbjct: 430 EEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKC 489

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+  E+V L + M + G   P++  YN L+          EA +++  M  +G  PD+ +
Sbjct: 490 GRLSEAVDLFNEMKKLG-CNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNS 548

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +N I   +A+ G    A E+   M+++ ++P+  +   ++    + G  +EA +  + M 
Sbjct: 549 HNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMN 608

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRD 335
             G   +L+ ++ +++   +I D D
Sbjct: 609 SKGFEYDLITYSSILEAVGKI-DED 632


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 126/517 (24%), Positives = 236/517 (45%), Gaps = 67/517 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +R+   +++ L + G+  EA  +F++L E G  P + TY TL+  L    + + + +I+ 
Sbjct: 427 LRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIK 486

Query: 132 QVEENG----MDPDS---------------------------IFFNAVINAFSESGNMEE 160
           ++ E G    +  DS                           I +N +++AF  +G+++E
Sbjct: 487 EMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDE 546

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK---------------------------- 192
           A+     MK+    PT  TY TL+ G G AG+                            
Sbjct: 547 AVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMA 606

Query: 193 -------PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
                   EES+ L D M R+G V  ++ TY++++   C   ++ +A +V  +M   GM+
Sbjct: 607 SFYKRDQEEESLSLFDEMVRKGCV-ADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGME 665

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P +  Y T+ ++  ++ + D A ++  E++ + + P+     I+++G  K  ++ EA + 
Sbjct: 666 PLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKL 725

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
             +MK   + P+L  +  L+ G  +    +    +   M E    PDV+ Y+++M+    
Sbjct: 726 VDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGK 785

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G +     IF  M K    PD   YS L     +E   E+A       I  G  PNV +
Sbjct: 786 GGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGV 845

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           ++++I  +   G +DRA+E+F++M      PN+ T+  L+ G ++A +   AE++L+ M+
Sbjct: 846 YSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEME 905

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             G  P   T+ +L +     G+  EA+    ++K K
Sbjct: 906 KVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEK 942



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 212/434 (48%), Gaps = 2/434 (0%)

Query: 64   MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
            M K+ C  +V + + LM S  +R + +E+ ++F+ ++  G    + TY+ ++  L     
Sbjct: 589  MEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDD 648

Query: 123  FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
             +    +  +++E GM+P    +  ++++  +   ++ A+  F +++ES L P T  YN 
Sbjct: 649  VDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNI 708

Query: 183  LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
            ++ G   + + +E+ KL+D M  + N+ P+L TY  L+        + EA+N+  KM   
Sbjct: 709  MVNGLVKSNRVDEACKLVDSMKNQ-NILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEE 767

Query: 243  GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            G +PDVV Y ++     + G+   A  +   M      P+  T   +I    KEG+++EA
Sbjct: 768  GHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEA 827

Query: 303  LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
              F       G  PN+ +++ LI  F +    D   E+   M+  +  P+++TY+ +++ 
Sbjct: 828  YYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSG 887

Query: 363  WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
             + AG ++  +++ ++M K G  PD   Y+IL  G  +    ++AE     M E G  P+
Sbjct: 888  LAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPD 947

Query: 423  VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            V+ FT++I        +  A E+FD M E G +P++ T+  L+     A +   A  I  
Sbjct: 948  VITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFH 1007

Query: 483  IMKAFGVHPQKSTF 496
             MK  G  P   T 
Sbjct: 1008 EMKVKGCMPDGITI 1021



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 214/452 (47%), Gaps = 19/452 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            ++S    G+   A      +I+ G  P + T+T L+ AL      +      + ++   
Sbjct: 293 FVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLR 352

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ + +  ++N  +++G +EEA + F +MKE+  +P    YNTLI G G AG+ + + 
Sbjct: 353 CSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMAC 412

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M   G V PNLRTYN+++          EAW + H +   G  PDV TYNT+   
Sbjct: 413 GLFKEMKDRGLV-PNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDV 471

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+ D+   +I EM    V+  G       S    EG I+ A    RT++    +P+
Sbjct: 472 LGKGGQMDKVLAIIKEM----VEKGGECIISRDSNAGHEGTIEGA---DRTVE----YPS 520

Query: 318 L-------VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           L       + +N L+  F+     D   ++L +MK+    P V+TY+T+++    AG +D
Sbjct: 521 LGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLD 580

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +  +M K G +P    YS L   + +  + E++  L   M+  G   +V  ++ +I
Sbjct: 581 EAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVI 640

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +  C    +D+A++VF +M E G+ P L  ++TL+    +  +   A +I   ++   + 
Sbjct: 641 NCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLV 700

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P    + ++      +    EA +++  +KN+
Sbjct: 701 PDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQ 732



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/485 (24%), Positives = 222/485 (45%), Gaps = 38/485 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+++L++ G   EA   FN +      P++VTYTTL+  L    R      +  
Sbjct: 322 VHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFV 381

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++EN   PD+I +N +I+   ++G  + A   F +MK+ GL P   TYN +I   G AG
Sbjct: 382 EMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAG 441

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK------ 245
           +  E+ +L   +  +G V P++ TYN L+        + +   ++ +M   G +      
Sbjct: 442 RQPEAWQLFHDLKEQGAV-PDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECIISRD 500

Query: 246 ------------------PDV-------VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
                             P +       +TYNT+ +A+  NG  D+A +++  M+ +   
Sbjct: 501 SNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECI 560

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P   T   ++ G  K G++ EA+   R M++ G  P++V ++ L+  F +   RD  +E 
Sbjct: 561 PTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYK---RDQEEES 617

Query: 341 LALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           L+L  E        DV TYS ++N    +  +D+  ++F  M + G++P    Y  L   
Sbjct: 618 LSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSS 677

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
            V++++ + A ++   + ES   P+  ++  +++G      +D A ++ D M    + P+
Sbjct: 678 LVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPD 737

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           L T+ +L+ G  ++ +   A  +   M   G  P    +  L +     G    A  I  
Sbjct: 738 LFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFR 797

Query: 518 KIKNK 522
            +  K
Sbjct: 798 AMAKK 802



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 228/464 (49%), Gaps = 10/464 (2%)

Query: 64   MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
            M K  C  TV + T L++ L + G+  EA ++   + + G +PS+VTY++L+A+   + +
Sbjct: 554  MKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQ 613

Query: 123  FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 S+  ++   G   D   ++ VIN   +S ++++A+D F +MKE G+ P    Y T
Sbjct: 614  EEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKT 673

Query: 183  LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
            L+       K + ++++ + + +E ++ P+   YN++V        + EA  ++  M   
Sbjct: 674  LLSSLVKDEKIDFALQIFNEL-QESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQ 732

Query: 243  GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
             + PD+ TY ++     ++G  ++A  +  +M   G +P+      ++    K GK+  A
Sbjct: 733  NILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHA 792

Query: 303  LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN----PDVITYST 358
            L   R M +    P++V ++ LI    + + ++G  E      E  ++    P+V  YS+
Sbjct: 793  LIIFRAMAKKRCVPDVVTYSSLI----DSLGKEGRVEEAYYFFENSISKGCTPNVGVYSS 848

Query: 359  IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
            +++++   G +D+  E+F++M +    P+   Y+ L  G  +      AE+LL  M + G
Sbjct: 849  LIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVG 908

Query: 419  FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
              P++V +  +I G    G +D A   F +M E G+ P++ TF +L+    +  +   A 
Sbjct: 909  CVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEAC 968

Query: 479  EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            E+   M+  G +P   T+ +L +     G   EA  I  ++K K
Sbjct: 969  ELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVK 1012



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/335 (27%), Positives = 166/335 (49%), Gaps = 2/335 (0%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            ++N L++  +  EA  + +++      P L TYT+LL  L    R     ++ +++ E G
Sbjct: 709  MVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEG 768

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             +PD + + ++++   + G +  A+  F  M +    P   TY++LI   G  G+ EE+ 
Sbjct: 769  HEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAY 828

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
               +    +G   PN+  Y+ L+ ++  +  +  A  +  +M      P++VTYN + + 
Sbjct: 829  YFFENSISKG-CTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSG 887

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             A+ G  + AE+++ EME  G  P+  T  I+I G  K G + EA  + + MKE G+ P+
Sbjct: 888  LAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPD 947

Query: 318  LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            ++ F  LI+   ++       E+   M+E   NP V+TY+ +++    AG + +   IF 
Sbjct: 948  VITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFH 1007

Query: 378  DMGKAGIKPDAHAYSILAKGY-VREQEPEKAEELL 411
            +M   G  PD     I+ +   VREQ+    EE L
Sbjct: 1008 EMKVKGCMPDGITIGIMKRILSVREQQFHALEEGL 1042



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 110/487 (22%), Positives = 207/487 (42%), Gaps = 67/487 (13%)

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNME 159
           + G+  ++ TYT ++  L   +  +++  I++ + + G         +++  F  + N+ 
Sbjct: 175 QDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVS 234

Query: 160 EAMDTFWKMKESGLTPTTSTYN----TLIKG----------------------------- 186
            A++ F +MK  G  P+T+ YN     L+KG                             
Sbjct: 235 GALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFV 294

Query: 187 --YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
             +  +G+ + + + +  M + G + P + T+ VL+ A     NI EA    + M     
Sbjct: 295 HSFNRSGRLDPAAEPIQEMIKSG-IDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRC 353

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P+VVTY T+    A+ G  ++A EV VEM+ N   P+      +I G  K G+   A  
Sbjct: 354 SPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACG 413

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
             + MK+ G+ PNL  +N++I    +   +    ++   +KE    PDV TY+T+++   
Sbjct: 414 LFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLG 473

Query: 365 TAGFMDKC----KEIFDDMGKAGIKPDAHA---------------------------YSI 393
             G MDK     KE+ +  G+  I  D++A                           Y+ 
Sbjct: 474 KGGQMDKVLAIIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNT 533

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L   ++     ++A +LL  M +    P VV +TT++ G    G +D A+ +  +M + G
Sbjct: 534 LMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQG 593

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
             P++ T+ +LM  + +  Q   +  +   M   G     ST+ L+      +    +A 
Sbjct: 594 CEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQAL 653

Query: 514 RILSKIK 520
            +  ++K
Sbjct: 654 DVFGRMK 660



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/320 (25%), Positives = 156/320 (48%), Gaps = 4/320 (1%)

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
           W  ++ G + T  TY  +IK    A + +  V++L  M +EG+ + ++     L+R + +
Sbjct: 171 WAGQQDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGH-RISMHLLTSLLRTFGS 229

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
             N++ A  + ++M + G  P    YN +     + G    A  V  ++    +QP+ +T
Sbjct: 230 TNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQT 289

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
             I +  + + G++  A    + M + G+ P +  F +LI   V+  + D   +    MK
Sbjct: 290 FRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMK 349

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
             R +P+V+TY+T++N  + AG +++  E+F +M +    PDA AY+ L  G  +  E +
Sbjct: 350 NLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEAD 409

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
            A  L   M + G  PN+  +  +IS     G    A ++F  + E G  P++ T+ TL+
Sbjct: 410 MACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLI 469

Query: 466 WGYSEARQPWRAEEILQIMK 485
               +  Q    +++L I+K
Sbjct: 470 DVLGKGGQ---MDKVLAIIK 486


>gi|32488707|emb|CAE03450.1| OSJNBa0088H09.8 [Oryza sativa Japonica Group]
          Length = 905

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 202/389 (51%), Gaps = 7/389 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N  ++ GK  +A +I   +   G K +  TY+ L+        F +  +I  ++  +G
Sbjct: 449 LLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSG 508

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N +I AF + GNM+ A+    KM++  + P+   +  +I+GY +AG  + ++
Sbjct: 509 LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSAL 568

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             LDLM R G V P + TYN L+     +  +  A +V+ KM+ +G+ P+  TY  I   
Sbjct: 569 DTLDLMRRSGCV-PTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRG 627

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           YA +G+  +A E   +++ +G++ +      ++   CK G+++ AL   R M    +  N
Sbjct: 628 YAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRN 687

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             I+N+LI G+    D    ++++  MKE  V P++ TY++ +NA   AG M + +++ +
Sbjct: 688 TFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIE 747

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G+KP+   Y+ L KG+ R   P++A +    M  +G  P+   +  +++   S  
Sbjct: 748 EMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRA 807

Query: 438 SMDRA------IEVFDKMCEHGVSPNLKT 460
           ++         I V  +M E+ ++ +L+T
Sbjct: 808 TVMEGSTYTGIISVCREMSENDLTVDLRT 836



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 225/492 (45%), Gaps = 75/492 (15%)

Query: 84  ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
           +RG    A+A F N+   G +P+   +T+L+ A  + +      S + +++  G++   +
Sbjct: 309 KRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIV 368

Query: 144 FFNAVINAFS------ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE--- 194
            ++ +I+ F+      +SGNME A +   +M+E G+      Y++++ GY I        
Sbjct: 369 TYSILISGFAKINDSHQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCL 428

Query: 195 ---ESVK-------------LLDLMSREGNV---------------KPNLRTYNVLVRAW 223
              E +K             LL+L  + G V               K N +TY++L+  +
Sbjct: 429 VVFERLKECGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGF 488

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
            +  +   A+ +  +M  SG++PD   YN +  A+ + G  D+A  ++ +M+   +QP+ 
Sbjct: 489 IHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSN 548

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
           R    II GY   G +K AL     M+  G  P ++ +N LI G V          VL  
Sbjct: 549 RAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDK 608

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY------------ 391
           M    + P+  TY+ IM  ++ +G + K  E F  + ++G+K D + Y            
Sbjct: 609 MSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGR 668

Query: 392 -----------------------SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
                                  +IL  G+ R  +  +AE+L+  M E G  PN+  +T+
Sbjct: 669 MQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTS 728

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
            I+  C  G M RA +V ++M + G+ PN+KT+ TL+ G++    P RA +  + MK  G
Sbjct: 729 YINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAG 788

Query: 489 VHPQKSTFLLLA 500
           + P ++++  L 
Sbjct: 789 LKPDEASYHCLV 800



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 162/332 (48%), Gaps = 4/332 (1%)

Query: 67  ESC---RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ESC      ++ + L+N  I       A AIF  ++  G +P    Y  L+ A       
Sbjct: 470 ESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAFCKMGNM 529

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +    I+ ++++  M P +  F  +I  ++ +G+M+ A+DT   M+ SG  PT  TYN L
Sbjct: 530 DRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNAL 589

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G     K + +V +LD MS  G + PN  TY +++R +    +I +A+    K+  SG
Sbjct: 590 IHGLVRKHKVQRAVSVLDKMSIAG-ITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESG 648

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           +K DV  Y T+  A  ++G    A  V  EM    +  N     I+I G+ + G + EA 
Sbjct: 649 LKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAE 708

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
              + MKE GV PN+  +   I    +  D    ++V+  M +  + P+V TY+T++  W
Sbjct: 709 DLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGW 768

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
           +     D+  + F++M  AG+KPD  +Y  L 
Sbjct: 769 ARVSLPDRALKCFEEMKLAGLKPDEASYHCLV 800



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 105/467 (22%), Positives = 211/467 (45%), Gaps = 45/467 (9%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +F  L+   H+PS   +  ++     +   +   +    +   G++P++  F ++++A++
Sbjct: 287 LFKKLL---HEPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYA 343

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI------AGKPEESVKLLDLMSREG 207
            + +M  A+    +MK  GL  T  TY+ LI G+        +G  E + +L+  M  +G
Sbjct: 344 VARDMRGALSCVEEMKSEGLELTIVTYSILISGFAKINDSHQSGNMERAEELVREMEEDG 403

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
              P +  Y+ ++  +   +N  +   V  ++   G KP +++Y  +   Y + G+  +A
Sbjct: 404 IDAP-IDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKA 462

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
             +  EME  G++ N +T  ++I+G+        A      M   G+ P+  I+NLLI+ 
Sbjct: 463 LSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEA 522

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           F ++ + D    +L  M++ R+ P    +  I+  ++ AG M    +  D M ++G  P 
Sbjct: 523 FCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPT 582

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ L  G VR+ + ++A  +L  M  +G  PN   +T I+ G+ + G + +A E F 
Sbjct: 583 VMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFT 642

Query: 448 KMCEHGVSPNLKTFETLMW-----------------------------------GYSEAR 472
           K+ E G+  ++  +ETL+                                    G++   
Sbjct: 643 KIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRG 702

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             W AE++++ MK  GV P   T+     A    G  + A++++ ++
Sbjct: 703 DVWEAEDLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAEKVIEEM 749


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 227/488 (46%), Gaps = 41/488 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++   +G   +A A  + +   G  P  VTY TLL A   +       +++++++ +G
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P    +N +++AF+  G +++A      M   G  P   TYN L  G   AGK +E+ 
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAF 333

Query: 198 KLLDLMSREGN-----------------------------------VKPNLRTYNVLVRA 222
           +L D M R G                                    VKP L T+N++V++
Sbjct: 334 RLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKS 393

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C E  + EA   + K+A  G+ PDV+TYNT+  AY + G   +A  ++ EM   G++ +
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   ++   CK  + ++A     +  + G  P+ V +  ++  + +  + +    +  
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWD 513

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG---KAGIKPDAHAYSILAKGYV 399
            M E ++ P + TY+T++        M++ KE  D +    + G+ PD   Y+I+   Y 
Sbjct: 514 QMIERKLIPSISTYNTLIKGLCR---MERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYC 570

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +E + E A      M+E+ F P+VV   T+++G C  G +D+A+++F+   E G   ++ 
Sbjct: 571 KEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVI 630

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+ TL+    +      A      M+  G+ P   T+ ++  A    G ++EA  +L K+
Sbjct: 631 TYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKL 690

Query: 520 KNKERTNE 527
            +  + ++
Sbjct: 691 ADSGKLSQ 698



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 210/447 (46%), Gaps = 43/447 (9%)

Query: 115 AALTIQKRFNSIHS----IMSQVEENGMDPDSIFFNAVINAFSESGNM--EEAMDTFWKM 168
           AAL+   R    H     + S     G+ P     NAV++A S S +   + ++D F  +
Sbjct: 140 AALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSL 199

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
            E  L P   T+N L+  +   G   +++  L  M   G + P+  TYN L+ A C +  
Sbjct: 200 IELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFG-LSPDAVTYNTLLNAHCRKGM 258

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           + EA  ++ +M   G+ P   TYNT+ +A+A+ G   QA +V+  M   G +P+ RT  +
Sbjct: 259 LGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNV 318

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVH-PNLVIFNLLIKG------------FVEIMDRD 335
           +  G C+ GK+ EA R    M+  G   P++V +N L+               +E M   
Sbjct: 319 LAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK 378

Query: 336 GVDEVL--------ALMKEFRVN---------------PDVITYSTIMNAWSTAGFMDKC 372
           GV   L        +L KE ++                PDVITY+T+++A+  AG + K 
Sbjct: 379 GVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKA 438

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             + D+M   G+K D    + +     + +  E AEELL +  + GF P+ V + T+++ 
Sbjct: 439 FTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAA 498

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +  + + + A+ ++D+M E  + P++ T+ TL+ G     +   A + L      G+ P 
Sbjct: 499 YFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPD 558

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKI 519
           ++T+ ++  A    G  + A R  +K+
Sbjct: 559 ETTYNIIIHAYCKEGDLENAFRFHNKM 585



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 185/399 (46%), Gaps = 18/399 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ SL + GK +EA      + E G  P ++TY TL+ A           ++M ++   G
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D+   N V+    +    E+A +      + G  P   +Y T++  Y     PE ++
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPAL 509

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L D M  E  + P++ TYN L++  C  + + EA + +++    G+ PD  TYN I  A
Sbjct: 510 RLWDQMI-ERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHA 568

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G+ + A     +M  N  +P+  TC  +++G C  GK+ +AL+   +  E G   +
Sbjct: 569 YCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVD 628

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ +N LI+   ++ D D        M+   + PD  TY+ +++A S AG  ++   +  
Sbjct: 629 VITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLH 688

Query: 378 DMGKAGIKPDAHAYSIL---------AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            +  +G    + A  +L          K +  + E E +E+     +E+        +  
Sbjct: 689 KLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALET--------YME 740

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            ++G C+ G +  A  V D+M + G+  +  T+ TLM G
Sbjct: 741 RLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEG 779



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 173/364 (47%), Gaps = 11/364 (3%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKES-GLTPTTSTYNTLIKGYGIAGK--PEES 196
           P S   +A ++A++       A      ++   G+ P+    N ++     +    P+ S
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + +   +  E  + PN  T+N+LV   C++  + +A   +  M   G+ PD VTYNT+  
Sbjct: 193 LDVFRSLI-ELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLN 251

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A+ + G   +A  ++  M+ +G+ P   T   ++S + + G IK+A +   +M  YG  P
Sbjct: 252 AHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEP 311

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR----VNPDVITYSTIMNAWSTAGFMDKC 372
           +L  +N+L  G  +      VDE   L  E        PDV+TY+T+++A          
Sbjct: 312 DLRTYNVLAMGLCQA---GKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDA 368

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             + ++M   G+KP    ++I+ K   +E + E+A   L  + E G  P+V+ + T+I  
Sbjct: 369 LRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C  G++ +A  + D+M   G+  +  T  T+++   + ++   AEE+L      G  P 
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488

Query: 493 KSTF 496
           + ++
Sbjct: 489 EVSY 492



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 165/370 (44%), Gaps = 41/370 (11%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+++  + G   +A  + + ++  G K    T  T+L  L   KR+     ++ 
Sbjct: 419 VITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLH 478

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
              + G  PD + +  V+ A+ +  N E A+  + +M E  L P+ STYNTLIKG     
Sbjct: 479 SPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRME 538

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E++  L+    +G V P+  TYN+++ A+C E ++  A+   +KM  +  KPDVVT 
Sbjct: 539 RLKEAIDKLNEFVEKGLV-PDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTC 597

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+      +G+ D+A ++       G + +  T   +I   CK G +  AL F   M+ 
Sbjct: 598 NTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEV 657

Query: 312 YGVHPNLVIFNLLIKGFVE---------------------------IMDRDGVDEVLALM 344
            G+ P+   +N+++    E                           ++     DE  A +
Sbjct: 658 KGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADE--ADV 715

Query: 345 KEFRVNPD-----------VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
           KE    P+           + TY   +N   T G + + K + D+M + G+  D   Y  
Sbjct: 716 KEHEGKPEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYIT 775

Query: 394 LAKGYVREQE 403
           L +G ++ Q+
Sbjct: 776 LMEGLIKRQK 785



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/327 (22%), Positives = 145/327 (44%), Gaps = 5/327 (1%)

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE--A 232
           PT+   +  +  Y     P  + +LL  + R   V+P+L+  N ++ A     +     +
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
            +V   +    + P+  T+N +   +   G    A   +  M+  G+ P+  T   +++ 
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
           +C++G + EA      MK  G+ P    +N L+  F  +       +V+  M  +   PD
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK-PDAHAYSILAKGYVREQEPEKAEELL 411
           + TY+ +      AG +D+   + D+M + G   PD   Y+ L     + +    A  LL
Sbjct: 313 LRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLL 372

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M + G  P +V    ++   C +G ++ A+   +K+ E G++P++ T+ TL+  Y +A
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA 432

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLL 498
               +A  ++  M   G+  +  TF L
Sbjct: 433 GNVAKAFTLMDEMVGKGL--KMDTFTL 457



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 134/293 (45%), Gaps = 37/293 (12%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M +  +   P+ A  +++ +IE    PS+ TY TL+  L   +R       +++  E G
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKG 554

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N +I+A+ + G++E A     KM E+   P   T NTL+ G  + GK ++++
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL 614

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL +    +G  K ++ TYN L+++ C   ++  A +    M   G++PD  TYN + +A
Sbjct: 615 KLFESWVEKGK-KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSA 673

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGII---------------------------- 289
            ++ G +++A  ++ ++  +G       C ++                            
Sbjct: 674 LSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDN 733

Query: 290 --------ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
                   ++G C  G++KEA      M + G+  +   +  L++G ++   R
Sbjct: 734 ALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQKR 786


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 200/419 (47%), Gaps = 1/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   + G  + A  +F  L   G  P++ TY  ++ A   + +F ++  ++ +++E G
Sbjct: 243 LIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERG 302

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +      FN +I+A  + G   EA D    M ESG  P  +TYNTLI G    GK  E+ 
Sbjct: 303 LAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAE 362

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL+   R G + PN  +Y  L+ A+        A  ++ +M+  G   D++ Y  +   
Sbjct: 363 ELLEHAIRRG-LFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHG 421

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               GE D A  V  +M   G+ P+     +++SG CK+G+   A +    M +  V P+
Sbjct: 422 LVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPD 481

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             +   L+ GF+   + D   ++  L  E  ++  V+  + ++  +   G M+     F 
Sbjct: 482 AFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFK 541

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M      PD   YS +  GYV++ +   A  +   M++    PNVV FT++I+G+C +G
Sbjct: 542 RMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNG 601

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            ++RA +VF++M   G  PN+ T+  L+  + +  +  +A    + M      P  +TF
Sbjct: 602 DLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATF 660



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 202/450 (44%), Gaps = 1/450 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N L+  GK + A+ +++ +++        T   +   L  + +      ++ 
Sbjct: 167 VFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIE 226

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +    G  P+ +F+N +I+ + ++G++E A   F ++K  G  PT  TY  +I  +   G
Sbjct: 227 KRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKG 286

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K E   KLL  M   G +  +L+ +N ++ A        EA + +  M  SG +PD+ TY
Sbjct: 287 KFEAVDKLLVEMKERG-LAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATY 345

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+       G+  +AEE++      G+ PN  +   +I  + K G+   A      M E
Sbjct: 346 NTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSE 405

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G   +L+ +  L+ G V   + D    V   M E  + PD   Y+ +M+     G    
Sbjct: 406 RGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPA 465

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            K++  +M    + PDA   + L  G++R    ++A++L    IE G   +VV    +I 
Sbjct: 466 AKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIK 525

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C  G M+ A+  F +M     SP+  T+ T++ GY +      A  +  +M      P
Sbjct: 526 GYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKP 585

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKN 521
              TF  L       G    A+++  ++++
Sbjct: 586 NVVTFTSLINGFCRNGDLNRAEKVFEEMRS 615



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 113/494 (22%), Positives = 222/494 (44%), Gaps = 23/494 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++  + G   EA      +IE G +P + TY TL+     + +      ++      G
Sbjct: 313 IIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRG 372

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +  +I+AFS++G    A +   +M E G T     Y  L+ G  +AG+ + ++
Sbjct: 373 LFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVAL 432

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            + D M   G + P+   YNVL+   C +     A  ++ +M    + PD     T+   
Sbjct: 433 TVRDKMMERG-ILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDG 491

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH-P 316
           + ++G  D+A+++       G+  +   C  +I GYCK G + +AL   + M   GVH P
Sbjct: 492 FIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFN-GVHSP 550

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +   ++ +I G+V+  D  G   +  LM +    P+V+T+++++N +   G +++ +++F
Sbjct: 551 DEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVF 610

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M   G +P+   Y+IL   + +E +  KA      M+ +   PN   F  +++G  ++
Sbjct: 611 EEMRSFGFEPNVVTYTILIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNN 670

Query: 437 GSM-----------DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
             +           +  +E F  M   G    +  + +++    + +    A ++   M 
Sbjct: 671 NGIAISSKRSNSQPNLTLEFFGMMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMM 730

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL--Y 543
           + G  P   +F+ L       GL  E +  L    N    N  E +  I V+  E+L  +
Sbjct: 731 SKGFPPDPVSFIALLH-----GLCLEGR--LQDWNNVIPCNFNERQLQIAVKYSEKLDQF 783

Query: 544 HKEATTASYPNLLQ 557
             E  T+    LLQ
Sbjct: 784 LSEGLTSDASLLLQ 797



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/438 (23%), Positives = 200/438 (45%), Gaps = 12/438 (2%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRF 123
           +KE   T  +++ ++++    G  +EA  ++N +I+  +  P +    +LL  L    + 
Sbjct: 124 SKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKV 183

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                +  ++ +   D D+     V     + G +EE      K    G  P    YNTL
Sbjct: 184 EIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTL 243

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVK---PNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           I GY   G  E +    +L+ +E  VK   P ++TY  ++ A+C +        ++ +M 
Sbjct: 244 IDGYCKNGDIERA----NLLFKELKVKGFLPTVKTYGAMINAFCKKGKFEAVDKLLVEMK 299

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
             G+   +  +N I  A  ++G   +A + +  M  +G +P+  T   +I+G C +GK++
Sbjct: 300 ERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLINGSCSKGKVR 359

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           EA          G+ PN   +  LI  F +  +     E+L  M E     D+I Y  ++
Sbjct: 360 EAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHTLDLIAYGALV 419

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           +    AG +D    + D M + GI PDA+ Y++L  G  ++     A++LL+ M++    
Sbjct: 420 HGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVT 479

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+  +  T++ G+   G++D A ++F    E G+  ++     ++ GY   +     + +
Sbjct: 480 PDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGY--CKYGMMNDAL 537

Query: 481 LQIMKAF-GVH-PQKSTF 496
           L   + F GVH P + T+
Sbjct: 538 LCFKRMFNGVHSPDEFTY 555



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 93/405 (22%), Positives = 166/405 (40%), Gaps = 41/405 (10%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           A    F E  N+ E M      K   L PT    + +I  Y  +G  +E+++L + +   
Sbjct: 107 ARFRVFKEIENLLETM------KSKELIPTCEALSFVISAYAGSGLVKEALELYNTVIDV 160

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            N  P++   N L+    +   +  A  V  +M       D  T   +     + G+ ++
Sbjct: 161 HNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEE 220

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
              +I +    G  PN      +I GYCK G I+ A    + +K  G  P +  +  +I 
Sbjct: 221 GRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMIN 280

Query: 327 GFVEIMDRDGVDEVLALMKE-----------------FR------------------VNP 351
            F +    + VD++L  MKE                 F+                    P
Sbjct: 281 AFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEP 340

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           D+ TY+T++N   + G + + +E+ +   + G+ P+  +Y+ L   + +  E  +A ELL
Sbjct: 341 DMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELL 400

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
           + M E G   +++ +  ++ G    G +D A+ V DKM E G+ P+   +  LM G  + 
Sbjct: 401 IEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKK 460

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
            +   A+++L  M    V P       L +     G   EAK++ 
Sbjct: 461 GRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLF 505



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/369 (22%), Positives = 153/369 (41%), Gaps = 41/369 (11%)

Query: 166 WKMKESGLTPTTSTY--NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
           W  K+S L+ +   +  ++L+K        +E   LL+ M +   + P     + ++ A+
Sbjct: 83  WASKQSTLSNSLDGFVCSSLLKLLARFRVFKEIENLLETM-KSKELIPTCEALSFVISAY 141

Query: 224 CNEKNITEAWNVMHKMA-ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM-EHNGVQP 281
                + EA  + + +       PDV   N++      +G+ + A +V  EM + NG   
Sbjct: 142 AGSGLVKEALELYNTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVD 201

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N   C I+  G CKEGK++E        K +G            KG V            
Sbjct: 202 NYTVC-IVTKGLCKEGKVEEGRHLIE--KRWG------------KGCV------------ 234

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
                    P+++ Y+T+++ +   G +++   +F ++   G  P    Y  +   + ++
Sbjct: 235 ---------PNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKK 285

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            + E  ++LL+ M E G   ++ IF  II      G    A +    M E G  P++ T+
Sbjct: 286 GKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATY 345

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            TL+ G     +   AEE+L+     G+ P K ++  L  A    G    A  +L ++  
Sbjct: 346 NTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSE 405

Query: 522 KERTNEMEA 530
           +  T ++ A
Sbjct: 406 RGHTLDLIA 414



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/209 (20%), Positives = 82/209 (39%), Gaps = 26/209 (12%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K++C+  V + T L+N     G    A+ +F  +   G +P++VTYT L+     + +
Sbjct: 578 MLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGK 637

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                    Q+  N   P+   FN ++N  + +               +G+  ++   N+
Sbjct: 638 LTKACFFFEQMLINKCIPNDATFNYLVNGLTNN---------------NGIAISSKRSNS 682

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
                    +P  +++   +M  +G     +  YN ++   C  K +  A  +  KM + 
Sbjct: 683 ---------QPNLTLEFFGMMISDG-WDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSK 732

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           G  PD V++  +       G       VI
Sbjct: 733 GFPPDPVSFIALLHGLCLEGRLQDWNNVI 761


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 227/487 (46%), Gaps = 36/487 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++  +++  L +     +A+ ++  + + G KP++VTY T+L +   + R +    ++S
Sbjct: 180 VKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLS 239

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++E G  P+ + +N ++N  S+ G +E+A     +M  SGL  +  TYN LI G+   G
Sbjct: 240 EMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKG 299

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E+  L++ M       P L TYN L+   C    +T        M  S   PD+V++
Sbjct: 300 LFVEAFDLVEEMVNR-RAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSF 358

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++   Y + G   +A  +  E++   + P   T   +I G C  G +  ALR  + M +
Sbjct: 359 NSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTD 418

Query: 312 YGVHPNLVIFNLLIKGFVEI----MDRDGVDEVLA-------------LMKEFRVN---- 350
            G+ P++  + +L+ G  ++    M R   +E+L+             ++ E ++     
Sbjct: 419 QGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSV 478

Query: 351 --------------PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
                         PDVITY+  ++A    G  ++  ++ ++M   G+ PD   Y+ +  
Sbjct: 479 AFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIIN 538

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G+V+     KA E+   M+  G  P+VV +T +I    +   +D A   F KM E  V  
Sbjct: 539 GFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPA 598

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N+ T+  ++ G    R+   A +    M+  G+ P K ++ +L       G  +EA R+ 
Sbjct: 599 NVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLY 658

Query: 517 SKIKNKE 523
            ++ +++
Sbjct: 659 REMLDRK 665



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 176/380 (46%), Gaps = 1/380 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   ++G   EA  +   ++     P+L TY TL+  L    +   +    S + ++ 
Sbjct: 291 LINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSK 350

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + FN+++  +  +G + EA   F ++K   L PT  TYNTLI G  + G  + ++
Sbjct: 351 FTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAAL 410

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L   M+ +G + P++ TY +LV        ++ A    ++M + G+KPD   YNT    
Sbjct: 411 RLKKEMTDQG-LFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVG 469

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +  +   A  +  EM   G  P+  T  + +   C++G  +EA      M   G+ P+
Sbjct: 470 EMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPD 529

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +  +I GFV+        EV   M    V P V+TY+ +++A +    +D     F 
Sbjct: 530 HVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFS 589

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M +  +  +   Y+ +  G    +  ++A +    M E G  PN   +T +I+  C+ G
Sbjct: 590 KMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMG 649

Query: 438 SMDRAIEVFDKMCEHGVSPN 457
             + A+ ++ +M +  + P+
Sbjct: 650 YWEEALRLYREMLDRKIQPD 669



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 153/337 (45%), Gaps = 1/337 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   L+      G   EA  +F+ L      P+++TY TL+  L +    ++   +  
Sbjct: 355 IVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKK 414

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G+ PD   +  ++N   + G +  A   F +M   GL P    YNT I G     
Sbjct: 415 EMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIA 474

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               +  + + M   G   P++ TYNV V A C + N  EA +++  M + G+ PD VTY
Sbjct: 475 DTSVAFSMQEEMLAAG-FPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTY 533

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            +I   + +NG   +A EV  EM   GV P+  T  ++I  +  +  +  A  +   M E
Sbjct: 534 TSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLE 593

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             V  N++ +N +I G       D   +    M+E  + P+  +Y+ ++N     G+ ++
Sbjct: 594 KSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEE 653

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
              ++ +M    I+PD+  +S+  K   R+ +    +
Sbjct: 654 ALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVHAVQ 690



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 97/429 (22%), Positives = 180/429 (41%), Gaps = 71/429 (16%)

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
            F KM  +GL P     N +++         ++  +  +M + G +KP + TYN ++ ++
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFG-IKPTVVTYNTMLDSY 225

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C E  + +A  ++ +M   G  P+ VTYN +    ++ GE +QA+ +I EM ++G+  + 
Sbjct: 226 CKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSA 285

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV------ 337
            T   +I+G+C++G   EA      M      P L  +N L+ G  + +   GV      
Sbjct: 286 YTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSD 345

Query: 338 --------------------------DEVLALMKEFRVN---PDVITYSTIMNAWSTAGF 368
                                      E   L  E +     P VITY+T+++     G+
Sbjct: 346 MLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGY 405

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSIL------------AKGYVREQ-----EPEK----- 406
           +D    +  +M   G+ PD   Y+IL            A+G+  E      +P++     
Sbjct: 406 LDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNT 465

Query: 407 -------------AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
                        A  +   M+ +GF P+V+ +   +   C  G+ + A ++ + M   G
Sbjct: 466 RIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDG 525

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           + P+  T+ +++ G+ +     +A E+   M + GV P   T+ +L  A  A  +   A 
Sbjct: 526 LIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAF 585

Query: 514 RILSKIKNK 522
              SK+  K
Sbjct: 586 MYFSKMLEK 594



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 76/152 (50%)

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
           C  +FD M + G+ PD    + + +    E    KA+ +   M + G  P VV + T++ 
Sbjct: 164 CLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLD 223

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            +C +G +D+A+E+  +M E G  PN  T+  L+ G S+  +  +A+ +++ M   G++ 
Sbjct: 224 SYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNV 283

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
              T+  L       GL  EA  ++ ++ N+ 
Sbjct: 284 SAYTYNPLINGFCQKGLFVEAFDLVEEMVNRR 315


>gi|356525427|ref|XP_003531326.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Glycine max]
          Length = 521

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/387 (26%), Positives = 191/387 (49%), Gaps = 1/387 (0%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           +N L  + + + A  +F+++   G  P +V+YT ++ AL   KRF+    +  ++ + G+
Sbjct: 126 LNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIIDALCNAKRFDEAAKVWRRLIDKGL 185

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            PD     A++      G ++ A +    + + G+   +  YN LI G+   G+ ++++K
Sbjct: 186 SPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKVNSLVYNALIDGFCRMGRVDKAMK 245

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           +   MSR G V P+L TYN+L+   C E  + EA  ++  M  SG++PD+ +YN +   +
Sbjct: 246 IKAFMSRTGCV-PDLVTYNILLNYCCEEGMVDEAVRLVETMERSGVEPDLYSYNELLKGF 304

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
            +    D+A  ++VE        +  +   +I+ +CK  + ++       M   G+ P++
Sbjct: 305 CKANMVDRAHLMMVERMQTKGMCDVVSYNTVITAFCKARRTRKGYELFEEMCGKGIRPDM 364

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           V FN+LI  F+       V ++L  M + RV PD I Y+ +++     G +D    +F D
Sbjct: 365 VTFNILIDAFLREGSTHVVKKLLDEMTKMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRD 424

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M + G+ PD  +Y+ L  G+ +      A  L   M   G +P+ V +  I+ G      
Sbjct: 425 MVENGVNPDVISYNALLNGFCKTSRVMDAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKK 484

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +  A  V+D+M E G + N    ETL+
Sbjct: 485 ISLACRVWDQMMERGFTLNRHLSETLV 511



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 213/442 (48%), Gaps = 6/442 (1%)

Query: 64  MNKESCRTVR-SMTKLMNSLIERGKPQEAQAIFN-NLIEGGHKPSLVTYTTLLAALTIQK 121
           M + +CR       + +  L+   +   A   +  ++I  G      TY+  ++AL    
Sbjct: 36  MTESNCRVFSVDYNRFIGVLLRHSRLHLAHHYYRRHVIPRGFSLLPFTYSRFISALCSAP 95

Query: 122 R---FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
                  IHS++  ++  G  PD   FN  +N       +E A++ F  M   G  P   
Sbjct: 96  NNINLPLIHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVV 155

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           +Y  +I     A + +E+ K+   +  +G + P+ +    LV   C+   +  A+ ++  
Sbjct: 156 SYTIIIDALCNAKRFDEAAKVWRRLIDKG-LSPDYKACVALVVGLCSGGRVDLAYELVVG 214

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           +   G+K + + YN +   + + G  D+A ++   M   G  P+  T  I+++  C+EG 
Sbjct: 215 VIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGM 274

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           + EA+R   TM+  GV P+L  +N L+KGF +    D    ++    + +   DV++Y+T
Sbjct: 275 VDEAVRLVETMERSGVEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGMCDVVSYNT 334

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++ A+  A    K  E+F++M   GI+PD   ++IL   ++RE      ++LL  M +  
Sbjct: 335 VITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMTKMR 394

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P+ + +T ++   C +G +D A  VF  M E+GV+P++ ++  L+ G+ +  +   A 
Sbjct: 395 VLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVMDAM 454

Query: 479 EILQIMKAFGVHPQKSTFLLLA 500
            +   M++ G++P + T+ L+ 
Sbjct: 455 HLFDEMQSKGLYPDEVTYKLIV 476



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/369 (27%), Positives = 181/369 (49%), Gaps = 4/369 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++++L    +  EA  ++  LI+ G  P       L+  L    R +  + ++ 
Sbjct: 154 VVSYTIIIDALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVV 213

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            V + G+  +S+ +NA+I+ F   G +++AM     M  +G  P   TYN L+      G
Sbjct: 214 GVIKGGVKVNSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEG 273

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM-HKMAASGMKPDVVT 250
             +E+V+L++ M R G V+P+L +YN L++ +C    +  A  +M  +M   GM  DVV+
Sbjct: 274 MVDEAVRLVETMERSG-VEPDLYSYNELLKGFCKANMVDRAHLMMVERMQTKGM-CDVVS 331

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+ TA+ +     +  E+  EM   G++P+  T  I+I  + +EG      +    M 
Sbjct: 332 YNTVITAFCKARRTRKGYELFEEMCGKGIRPDMVTFNILIDAFLREGSTHVVKKLLDEMT 391

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           +  V P+ + +  ++    +    D    V   M E  VNPDVI+Y+ ++N +     + 
Sbjct: 392 KMRVLPDCIFYTAVVDHLCKNGKVDVAHSVFRDMVENGVNPDVISYNALLNGFCKTSRVM 451

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               +FD+M   G+ PD   Y ++  G +R ++   A  +   M+E GF  N  +  T++
Sbjct: 452 DAMHLFDEMQSKGLYPDEVTYKLIVGGLIRGKKISLACRVWDQMMERGFTLNRHLSETLV 511

Query: 431 SGW-CSDGS 438
           +    SDG+
Sbjct: 512 NAIQSSDGT 520



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 78/180 (43%)

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
           +  +L  M      PD+  ++T +N       ++   E+F  M   G  PD  +Y+I+  
Sbjct: 103 IHSLLLDMDSLGFVPDIWAFNTYLNLLCRQNRLETALELFHSMPSKGRDPDVVSYTIIID 162

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
                +  ++A ++   +I+ G  P+      ++ G CS G +D A E+   + + GV  
Sbjct: 163 ALCNAKRFDEAAKVWRRLIDKGLSPDYKACVALVVGLCSGGRVDLAYELVVGVIKGGVKV 222

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N   +  L+ G+    +  +A +I   M   G  P   T+ +L       G+  EA R++
Sbjct: 223 NSLVYNALIDGFCRMGRVDKAMKIKAFMSRTGCVPDLVTYNILLNYCCEEGMVDEAVRLV 282


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 214/446 (47%), Gaps = 5/446 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N+ ++  + +EA  +    +E    P+ + YTT++       + +    ++ +++E G
Sbjct: 82  LLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERG 141

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D +  + +I      G ++EA++ F  M E   +P   TYNT++ G   A + +E++
Sbjct: 142 VKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANRIDEAL 200

Query: 198 KLLDLMSRE----GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +L D M +        +P++ +Y+ ++ A C  + + +A+    +M A G  P+VVTY++
Sbjct: 201 ELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSS 260

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     +     +  E+++ M+  G   N      ++    K  + ++A +F   + + G
Sbjct: 261 LIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSG 320

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             PN+V +N+ + G  +    D    +L  M E +V PDVITYS+I++ +  AG MDK  
Sbjct: 321 KKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKAD 380

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           ++F  M      P    +  L  G+   ++  +A  +   M+ +GF P +  +  ++   
Sbjct: 381 DVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCV 440

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C   S++ A+E++ KM      P+  T+  L+     AR+   A+E L +M+A  V P  
Sbjct: 441 CGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNG 500

Query: 494 STFLLLAEARRATGLTKEAKRILSKI 519
           +    L E     G   EA  +L  +
Sbjct: 501 AICHALVEVLCKQGEVDEACSVLDNV 526



 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 183/387 (47%), Gaps = 4/387 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++L +  + ++A   F  L++ G KP++VTY   +  L    R +  + I+ ++ E+ 
Sbjct: 296 MLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESK 355

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD I ++++I+ F ++G M++A D F +M      P   T+ TL+ G+    K  E+ 
Sbjct: 356 VTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAF 415

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++ + M   G + P L+TYNVL+   C   ++  A  + HKM     +PD  TY  +   
Sbjct: 416 RVHEDMVNAGFI-PGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQC 474

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+A+E +  ME + V PNG  C  ++   CK+G++ EA      + E G  P 
Sbjct: 475 LCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPL 534

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              F +L++   E+  R   +    L++      D  TYS  +     AG  D+  E+ +
Sbjct: 535 GETFKILVE---ELYLRKKWEAASKLLRSPGFVADAATYSLCVAEICKAGKPDEAVEVIE 591

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G++PD   Y  + +        E A      M   G  P +V +T +I   CS  
Sbjct: 592 QMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSAD 651

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETL 464
             D A  +F+ M   G +P  +T  TL
Sbjct: 652 MADEAFRIFEAMVAAGFTPQAQTMRTL 678



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 192/382 (50%), Gaps = 7/382 (1%)

Query: 148 VINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
           ++NAF ++   EEA     +  E    P    Y T+I G+  AG+ +++ +LLD M   G
Sbjct: 82  LLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERG 141

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
            VK ++  ++ L++  C +  I EA      M      P+V+TYNT+     +    D+A
Sbjct: 142 -VKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNGLCKANRIDEA 199

Query: 268 EEVIVEMEH-----NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
            E+  +ME      +G +P+  +   +I   CK  ++ +A  + + M+  G  PN+V ++
Sbjct: 200 LELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYS 259

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            LI G  ++       E+L  MKE     ++I ++ +++A       +K  + F+ + K+
Sbjct: 260 SLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKS 319

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G KP+   Y++   G  +    ++A  +L+ M+ES   P+V+ +++II G+C  G MD+A
Sbjct: 320 GKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKA 379

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            +VF +M  H   P+  TF TL+ G+SE ++   A  + + M   G  P   T+ +L + 
Sbjct: 380 DDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDC 439

Query: 503 RRATGLTKEAKRILSKIKNKER 524
                  + A  I  K+K K+R
Sbjct: 440 VCGADSVESALEIYHKMKRKKR 461



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 106/468 (22%), Positives = 203/468 (43%), Gaps = 33/468 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + ++++L +  +  +A   F  +   G  P++VTY++L+  L    R +    ++ 
Sbjct: 220 VISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLL 279

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++E G   + I FNA+++A  ++   E+A   F ++ +SG  P   TYN  + G   AG
Sbjct: 280 HMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAG 339

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+ ++L L   E  V P++ TY+ ++  +C    + +A +V  +M      P  VT+
Sbjct: 340 RVDEAYRIL-LEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTF 398

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   ++++ ++ +A  V  +M + G  P  +T  +++   C    ++ AL     MK 
Sbjct: 399 MTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKR 458

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
               P+   +  LI+        D   E L +M+   V P+      ++      G +D+
Sbjct: 459 KKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDE 518

Query: 372 CKEIFDDMGKAGIKP--------------------------------DAHAYSILAKGYV 399
              + D++ + G +P                                DA  YS+      
Sbjct: 519 ACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRSPGFVADAATYSLCVAEIC 578

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +  +P++A E++  M+  G  P+   +  ++   C    ++ AI  F+KM   G +P L 
Sbjct: 579 KAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIAEFEKMASRGCAPGLV 638

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           T+  L+     A     A  I + M A G  PQ  T   L+   R  G
Sbjct: 639 TYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 686



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 156/353 (44%), Gaps = 47/353 (13%)

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           N  T  VL+ A+   K   EA  ++ +       P+ + Y T+   + + G+ DQA E++
Sbjct: 75  NAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELL 134

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            EM+  GV+ +      +I G C++G+I EAL   ++M E    PN++ +N ++ G  + 
Sbjct: 135 DEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGE-ECSPNVITYNTVVNGLCKA 193

Query: 332 MDRDGVDEVLALMKEFR--------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
              + +DE L L  +            PDVI+YST+++A   A  +DK  E F  M   G
Sbjct: 194 ---NRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVG 250

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF------------------------ 419
             P+   YS L  G  +   P +  ELL+ M E GF                        
Sbjct: 251 CAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKAC 310

Query: 420 -----------HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
                       PNVV +   + G C  G +D A  +  +M E  V+P++ T+ +++ G+
Sbjct: 311 QFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGF 370

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            +A +  +A+++   M      P   TF+ L         ++EA R+   + N
Sbjct: 371 CKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVN 423



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 108/220 (49%), Gaps = 8/220 (3%)

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G Q N  TC ++++ + K  + +EA R  +   E    PN +++  +I GF +    D  
Sbjct: 71  GFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQA 130

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            E+L  MKE  V  DV+ +ST++      G +D+  E F  MG+    P+   Y+ +  G
Sbjct: 131 FELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEE-CSPNVITYNTVVNG 189

Query: 398 YVREQEPEKAEELLMTM-----IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
             +    ++A EL   M        G  P+V+ ++T+I   C    +D+A E F +M   
Sbjct: 190 LCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAV 249

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIM--KAFGVH 490
           G +PN+ T+ +L+ G  +  +P    E+L  M  K FG++
Sbjct: 250 GCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGIN 289



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/188 (22%), Positives = 89/188 (47%), Gaps = 4/188 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L ++G+  EA ++ +N++E G +P   T+  L+  L ++K++ +   ++      G
Sbjct: 506 LVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLLRS---PG 562

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              D+  ++  +    ++G  +EA++   +M   G+ P   TY  +++      + E ++
Sbjct: 563 FVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAI 622

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
              + M+  G   P L TY +L+   C+     EA+ +   M A+G  P   T  T+++ 
Sbjct: 623 AEFEKMASRG-CAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTLSSC 681

Query: 258 YAQNGEAD 265
               G  D
Sbjct: 682 LRDAGYQD 689



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 61/108 (56%), Gaps = 3/108 (2%)

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
           K G + +A+  ++L   +V+ +  E+A  LL   +E    PN +++TT+I+G+C  G +D
Sbjct: 69  KPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVD 128

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +A E+ D+M E GV  ++    TL+ G     +  R +E L+  K+ G
Sbjct: 129 QAFELLDEMKERGVKMDVLLHSTLIQGLC---RKGRIDEALEQFKSMG 173


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 213/448 (47%), Gaps = 2/448 (0%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           RS   L++   + GK  + +  F ++I  G +P++ TY  ++  +  +    +   +  +
Sbjct: 228 RSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEE 287

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           ++  G+ PD++ +N++I+ F + G +++ +  F +MK+    P   TYN LI  +   GK
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
               ++    M   G +KPN+ +Y+ LV A+C E  + +A      M   G+ P+  TY 
Sbjct: 348 LPIGLEFYREMKGNG-LKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYT 406

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++  A  + G    A  +  EM   GV+ N  T   +I G C   ++KEA      M   
Sbjct: 407 SLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTA 466

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           GV PNL  +N LI GFV+  + D   E+L  +K   + PD++ Y T +    +   ++  
Sbjct: 467 GVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAA 526

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           K + ++M + GIK ++  Y+ L   Y +   P +   LL  M E      VV F  +I G
Sbjct: 527 KVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDG 586

Query: 433 WCSDGSMDRAIEVFDKMC-EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            C +  + +A++ F+++  + G+  N   F  ++ G  +  Q   A  + + M   G+ P
Sbjct: 587 LCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVP 646

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKI 519
            ++ +  L +     G   EA  +  K+
Sbjct: 647 DRTAYTSLMDGNFKQGNVLEALALRDKM 674



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 227/485 (46%), Gaps = 37/485 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   +++ + + G  + A+ +F  +   G  P  VTY +++       R +      
Sbjct: 261 TVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFF 320

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++++   +PD I +NA+IN F + G +   ++ + +MK +GL P   +Y+TL+  +   
Sbjct: 321 EEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKE 380

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  ++++K    M R G V PN  TY  L+ A C   N+++A+ + ++M   G++ +VVT
Sbjct: 381 GMMQQAIKFYVDMRRVGLV-PNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVT 439

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +           +AEE+  +M+  GV PN  +   +I G+ K   +  AL     +K
Sbjct: 440 YTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELK 499

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG--- 367
             G+ P+L+++   I G   +   +    V+  MKE  +  + + Y+T+M+A+  +G   
Sbjct: 500 GRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPT 559

Query: 368 ----FMDKCKEI------------FDDMGK-----------------AGIKPDAHAYSIL 394
                +D+ KE+             D + K                  G++ +A  ++ +
Sbjct: 560 EGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAM 619

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G  ++ + E A  L   M++ G  P+   +T+++ G    G++  A+ + DKM E G+
Sbjct: 620 IDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGM 679

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
             +L  + +L+WG S   Q  +A   L+ M   G+HP +   + + +     G   EA  
Sbjct: 680 KLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVE 739

Query: 515 ILSKI 519
           + S +
Sbjct: 740 LQSYL 744



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 239/538 (44%), Gaps = 52/538 (9%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L + LI+ G  +EA   F+ +      P   +   LL       + + +      +   G
Sbjct: 198 LFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRFFKDMIGAG 257

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P    +N +I+   + G++E A   F +MK  GL P T TYN++I G+G  G+ +++V
Sbjct: 258 ARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTV 317

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
              + M ++   +P++ TYN L+  +C    +        +M  +G+KP+VV+Y+T+  A
Sbjct: 318 CFFEEM-KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDA 376

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G   QA +  V+M   G+ PN  T   +I   CK G + +A R    M + GV  N
Sbjct: 377 FCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWN 436

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
                                              V+TY+ +++    A  M + +E+F 
Sbjct: 437 -----------------------------------VVTYTALIDGLCDAERMKEAEELFG 461

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M  AG+ P+  +Y+ L  G+V+ +  ++A ELL  +   G  P+++++ T I G CS  
Sbjct: 462 KMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLE 521

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            ++ A  V ++M E G+  N   + TLM  Y ++  P     +L  MK   +     TF 
Sbjct: 522 KIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFC 581

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQ 557
           +L +      L  +A    ++I N        A     ++ L +    EA T  +  ++Q
Sbjct: 582 VLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ 641

Query: 558 ---IPN--VVSSDQKGSAAALKKGRML----LRD--ADSSLECSWFATTSMY--LSHS 602
              +P+    +S   G+    K+G +L    LRD  A+  ++    A TS+   LSH 
Sbjct: 642 KGLVPDRTAYTSLMDGN---FKQGNVLEALALRDKMAEIGMKLDLLAYTSLVWGLSHC 696



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 190/382 (49%), Gaps = 2/382 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + L+++  + G  Q+A   + ++   G  P+  TYT+L+ A       +    + +
Sbjct: 367 VVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGN 426

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G++ + + + A+I+   ++  M+EA + F KM  +G+ P  ++YN LI G+  A 
Sbjct: 427 EMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAK 486

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + +++LL+ +   G +KP+L  Y   +   C+ + I  A  VM++M   G+K + + Y
Sbjct: 487 NMDRALELLNELKGRG-IKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIY 545

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL-RFARTMK 310
            T+  AY ++G   +   ++ EM+   ++    T  ++I G CK   + +A+  F R   
Sbjct: 546 TTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISN 605

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           ++G+  N  IF  +I G  +    +    +   M +  + PD   Y+++M+     G + 
Sbjct: 606 DFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVL 665

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   + D M + G+K D  AY+ L  G     + +KA   L  MI  G HP+ V+  +++
Sbjct: 666 EALALRDKMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVL 725

Query: 431 SGWCSDGSMDRAIEVFDKMCEH 452
                 G +D A+E+   + +H
Sbjct: 726 KKHYELGCIDEAVELQSYLMKH 747



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 142/312 (45%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P    ++ L     +   + EA     KM    + P   + N +   +A+ G+ D  +  
Sbjct: 190 PGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKRF 249

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             +M   G +P   T  I+I   CKEG ++ A      MK  G+ P+ V +N +I GF +
Sbjct: 250 FKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGK 309

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           +   D        MK+    PDVITY+ ++N +   G +    E + +M   G+KP+  +
Sbjct: 310 VGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVS 369

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           YS L   + +E   ++A +  + M   G  PN   +T++I   C  G++  A  + ++M 
Sbjct: 370 YSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEML 429

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           + GV  N+ T+  L+ G  +A +   AEE+   M   GV P  +++  L           
Sbjct: 430 QVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMD 489

Query: 511 EAKRILSKIKNK 522
            A  +L+++K +
Sbjct: 490 RALELLNELKGR 501


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 212/457 (46%), Gaps = 1/457 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL    +   + ++A A+F  ++     PS+V +T LL A    +R+ ++     ++E  
Sbjct: 41  KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G+  D   F  +I+ F     +  A+    KM + G  P+  T+ +L+ G+ +  +  ++
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
             L+ LM + G  +PN+  YN L+   C    +  A  ++++M   G+  DVVTYNT+ T
Sbjct: 161 FSLVILMVKSG-YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
               +G    A  ++ +M    + P+  T   +I  + K+G + EA    + M +  V P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N V +N +I G           +   LM      P+V+TY+T+++ +     +D+  ++F
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             M   G   D   Y+ L  GY +  +   A ++   M+     P+++    ++ G C +
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G ++ A+  FD M E      +  +  ++ G  +A +  +A E+   +   GV P   T+
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459

Query: 497 LLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEED 533
            ++       G  +EA  ++ ++K +    +M AE+D
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDD 496



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 193/382 (50%), Gaps = 3/382 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T L++      +   A ++   +++ G++PS+VT+ +LL    +  R     S++  +
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            ++G +P+ + +N +I+   ++G +  A++   +M++ GL     TYNTL+ G   +G+ 
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            ++ ++L D+M R  ++ P++ T+  L+  +  + N+ EA  +  +M  S + P+ VTYN
Sbjct: 228 SDAARMLRDMMKR--SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           +I      +G    A++    M   G  PN  T   +ISG+CK   + E ++  + M   
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G + ++  +N LI G+ ++       ++   M   RV PD+IT+  +++     G ++  
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
              FDDM ++       AY+I+  G  +  + EKA EL   +   G  P+   +T +I G
Sbjct: 406 LVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465

Query: 433 WCSDGSMDRAIEVFDKMCEHGV 454
            C +G    A E+  +M E G+
Sbjct: 466 LCKNGPRREADELIRRMKEEGI 487



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 192/370 (51%), Gaps = 4/370 (1%)

Query: 102  GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
            G +PS+VT  +LL       RF    S++  ++  G  P+ + +N VIN   ++ ++  A
Sbjct: 669  GFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNA 728

Query: 162  MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLV 220
            ++ F+ M++ G+     TYNTLI G   +G+  ++ +LL D++ R+  + PN+  +  L+
Sbjct: 729  LEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRK--IDPNVIFFTALI 786

Query: 221  RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
              +  E N+ EA N+  +M    + P+V TYN++   +  +G    A+ +   M   G  
Sbjct: 787  DTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCF 846

Query: 281  PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
            P+  T   +I+G+CK  ++++ ++    M   G+  +   +N LI G+ +    +   +V
Sbjct: 847  PDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKV 906

Query: 341  LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
               M +  V+PD++TY+ +++     G ++K   + +D+ K+ +  D   Y+I+ +G  R
Sbjct: 907  FNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCR 966

Query: 401  EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
              + ++A  L  ++   G  P+ + + T+ISG C  G    A ++  +M E G  P+ + 
Sbjct: 967  TDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERI 1026

Query: 461  F-ETLMWGYS 469
            + ETL   Y+
Sbjct: 1027 YDETLRDHYT 1036



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/434 (23%), Positives = 208/434 (47%), Gaps = 1/434 (0%)

Query: 87   KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
            K  +A ++F  +++    PS+V +T +L  +    +F+ +  +  ++E  G+  D   F 
Sbjct: 584  KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 643

Query: 147  AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
             +I+ F     +  A+    KM + G  P+  T  +L+ G+    + +E+V L+D M   
Sbjct: 644  ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 207  GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            G V PN+  YN ++   C  +++  A  V + M   G++ D VTYNT+ +  + +G    
Sbjct: 704  GFV-PNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTD 762

Query: 267  AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
            A  ++ +M    + PN      +I  + KEG + EA    + M    V PN+  +N LI 
Sbjct: 763  AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLIN 822

Query: 327  GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
            GF           +  LM      PDV+TY+T++  +  +  ++   ++F +M   G+  
Sbjct: 823  GFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVG 882

Query: 387  DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
            DA  Y+ L  GY +  +   A+++   M++ G  P++V +  ++   C++G +++A+ + 
Sbjct: 883  DAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMV 942

Query: 447  DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
            + + +  +  ++ T+  ++ G     +   A  + + +   GV P    ++ +       
Sbjct: 943  EDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRK 1002

Query: 507  GLTKEAKRILSKIK 520
            GL +EA ++  ++K
Sbjct: 1003 GLQREADKLCRRMK 1016



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 78/366 (21%), Positives = 171/366 (46%), Gaps = 1/366 (0%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
            ++A   F +M +S   P+   +  ++       K +  + L   M   G +  +L ++ 
Sbjct: 585 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLG-ISHDLYSFT 643

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +L+  +C    ++ A  ++ KM   G +P +VT  ++   + Q     +A  ++  M+  
Sbjct: 644 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 703

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G  PN      +I+G CK   +  AL     M++ G+  + V +N LI G          
Sbjct: 704 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 763

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
             +L  M + +++P+VI ++ +++ +   G + + + ++ +M +  + P+   Y+ L  G
Sbjct: 764 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLING 823

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           +        A+ +   M+  G  P+VV + T+I+G+C    ++  +++F +M   G+  +
Sbjct: 824 FCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGD 883

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
             T+ TL+ GY +A +   A+++   M   GV P   T+ +L +     G  ++A  ++ 
Sbjct: 884 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVE 943

Query: 518 KIKNKE 523
            ++  E
Sbjct: 944 DLQKSE 949



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 1/243 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++  +++G   EAQ ++  +I+    P+ VTY +++  L +  R         
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  P+ + +N +I+ F +   ++E M  F +M   G      TYNTLI GY   G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K   ++ +   M     V P++ T+ +L+   C    I  A      M  S     +V Y
Sbjct: 366 KLRVALDIFCWMVSR-RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     +  + ++A E+   +   GV+P+ RT  I+I G CK G  +EA    R MKE
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484

Query: 312 YGV 314
            G+
Sbjct: 485 EGI 487


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 115/463 (24%), Positives = 208/463 (44%), Gaps = 4/463 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L+  L +  +  +A A+F  ++  G K  +    TL+              ++  +
Sbjct: 163 SFDTLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHM 222

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +    D+  +  ++NA   +G M E        +  G   +   YN +I+G+   G+ 
Sbjct: 223 TAHACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRL 282

Query: 194 EESVKLLD-LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            E+ +L +  M++E    P++ TYN+L+ A C  K + EA  +  +    G+  DV TY+
Sbjct: 283 AEATQLFESTMTKES--VPDVFTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYS 339

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +  A+ + G A +A EV   M+  G  P+     ++IS   K+GK+ EAL     M   
Sbjct: 340 YLMDAFGKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRK 399

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ P+   +N++I         +       +MK  + +PDV+TY+T++N        D+ 
Sbjct: 400 GIMPDCRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEA 459

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            ++FD+M      PD   +  L     +    E A E    +++ G  PN  I+  +ISG
Sbjct: 460 CDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISG 519

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C  G +D+  E+F  M E    P+  T+  L+ G+S       A E+LQ M   G  P 
Sbjct: 520 FCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPA 579

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP 535
            +T+ +L  +    G  ++A  +  ++  K    +M+    +P
Sbjct: 580 LATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSALP 622



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 133/509 (26%), Positives = 218/509 (42%), Gaps = 60/509 (11%)

Query: 43  KQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGG 102
           K L     P D+    H +  M KE C+  R+          R K              G
Sbjct: 7   KHLLKAGLPVDA----HTATAMVKEVCKLGRTELLAELLAELRQK--------------G 48

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE----NGMDPDSIFFNAVINAFSESGNM 158
              S VT T  + A     R   + + M  +++    N   PD++ F A ++   E   +
Sbjct: 49  VGLSEVTCTECIQAF---GRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRV 105

Query: 159 EEAMDTFWKMKES-GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           E+AM  F  M+E+    P    YNTLI GY  AG  + ++ +   + +EG+ KPN  +++
Sbjct: 106 EQAMTLFDDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFD 165

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            LV   C     T+A  V  +M  +G+K DV   NT+     + G   QA  ++  M  +
Sbjct: 166 TLVIFLCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAH 225

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI------ 331
               +  T GI+++ +C+ G++ E   F    +  G   + V +N +I+GF+        
Sbjct: 226 ACARDAFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEA 285

Query: 332 -------MDRDGV------------------DEVLALMKEFR---VNPDVITYSTIMNAW 363
                  M ++ V                  +E L L +E     V  DV TYS +M+A+
Sbjct: 286 TQLFESTMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAF 345

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
             AG   K  E+F +M KAG  PD   Y++L     ++ + ++A ELL  M   G  P+ 
Sbjct: 346 GKAGRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDC 405

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
             +  +I    S G  ++A   F  M     SP++ T+ TL+ G  + R+   A ++   
Sbjct: 406 RTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDE 465

Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           M+A    P  +TF  L +     G  ++A
Sbjct: 466 MQANKCMPDLTTFGTLIDTLAKAGRMEDA 494



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 108/217 (49%), Gaps = 4/217 (1%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           CRT   +  +++S    G+ ++A + F  +    H P +VTY TLL  L   +R +    
Sbjct: 405 CRTYNIVIDVLSSC---GRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACD 461

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +  +++ N   PD   F  +I+  +++G ME+A++   ++ + G  P +  YN LI G+ 
Sbjct: 462 LFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFC 521

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            +G+ ++  +L   M  E +  P+  TY +LV  +    + + A  ++ +M   G  P +
Sbjct: 522 RSGQVDKGYELFQDMI-ECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPAL 580

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
            TYN +  + +  G+ + A  +  EM   G  P+ +T
Sbjct: 581 ATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQT 617



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/183 (29%), Positives = 92/183 (50%), Gaps = 1/183 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N L +  +  EA  +F+ +      P L T+ TL+  L    R        +
Sbjct: 440 VVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSA 499

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G  P+S  +NA+I+ F  SG +++  + F  M E    P + TY  L+ G+   G
Sbjct: 500 RLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRG 559

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               +++LL  M REG+  P L TYNVL+R+      + +A+ +  +M A G  PD+ TY
Sbjct: 560 HTSMAMELLQEMVREGHT-PALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTY 618

Query: 252 NTI 254
           + +
Sbjct: 619 SAL 621



 Score = 40.0 bits (92), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 18/75 (24%), Positives = 37/75 (49%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L+     RG    A  +   ++  GH P+L TY  L+ +L++  +    +++  ++  
Sbjct: 549 TILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIA 608

Query: 136 NGMDPDSIFFNAVIN 150
            G +PD   ++A+ N
Sbjct: 609 KGFNPDMQTYSALPN 623


>gi|297800104|ref|XP_002867936.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297313772|gb|EFH44195.1| hypothetical protein ARALYDRAFT_492917 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 817

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 231/490 (47%), Gaps = 44/490 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++ L   G+  EA      ++E G +P+L+TY+ L+  LT  KR    + ++ 
Sbjct: 287 VVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLK 346

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ E G  P+ I +N +I++  E+G++ +A++    M   GL+ T+STYNTLIKGY  +G
Sbjct: 347 EMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSG 406

Query: 192 KPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           + + + +LL +++S   NV  N  ++  ++   C+      A   + +M    M P    
Sbjct: 407 QADIAERLLKEMLSIGFNV--NQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGL 464

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
             T+ +   ++G+  +A E+ ++  + G   + +T   ++ G C+ GK++E  R  + + 
Sbjct: 465 LTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEIL 524

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
             G   + V +N LI G         +DE    M E     + PD  TYS ++       
Sbjct: 525 GRGFVMDRVSYNTLISG---CCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMN 581

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +++  + + D  + G+ PD + YS++  G  + +  E+ ++L   M+ +   PN V++ 
Sbjct: 582 KVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYN 641

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW--------------------- 466
            +I  +C  G +  A+E+ + M   G+SPN  T+ +L+                      
Sbjct: 642 HLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRME 701

Query: 467 --------------GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
                         GY +  Q  + E +L+ M +  VHP K T+ ++       G   EA
Sbjct: 702 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 761

Query: 513 KRILSKIKNK 522
            R+L +++ K
Sbjct: 762 SRLLHEMREK 771



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 185/398 (46%), Gaps = 1/398 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  +   L+    + G+   A+ +   ++  G   +  ++T+++  L     F+S    +
Sbjct: 391 TSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFV 450

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++    M P       +I+   + G   +A++ + K    G    T T N L+ G   A
Sbjct: 451 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEA 510

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK EE  ++   +   G V   + +YN L+   C  K + EA+  M +M   G+KPD  T
Sbjct: 511 GKLEEGFRIQKEILGRGFVMDRV-SYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYT 569

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +        + ++A +   + + NG+ P+  T  ++I G CK  + +E  +    M 
Sbjct: 570 YSILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMM 629

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              + PN V++N LI  +          E+   MK   ++P+  TY++++   S    ++
Sbjct: 630 SNNLQPNTVVYNHLIGAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVE 689

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + K + ++M   G++P+   Y+ L  GY +  +  K E LL  M     HPN + +T +I
Sbjct: 690 EAKLLLEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMI 749

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            G+  DG++  A  +  +M E G+ P+  T++  ++GY
Sbjct: 750 GGYARDGNVTEASRLLHEMREKGIVPDSITYKEFIYGY 787



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/420 (24%), Positives = 194/420 (46%), Gaps = 3/420 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++SLIE G   +A  I + ++  G   +  TY TL+       + +    ++ ++   G
Sbjct: 363 LIDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIG 422

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            + +   F +VI         + A+    +M    ++P      TLI G    GK  ++V
Sbjct: 423 FNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKAV 482

Query: 198 KL-LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +L L  +++   V  + +T N L+   C    + E + +  ++   G   D V+YNT+ +
Sbjct: 483 ELWLKFLNKGFLV--DTKTSNALLHGLCEAGKLEEGFRIQKEILGRGFVMDRVSYNTLIS 540

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
               N + D+A   + EM   G++P+  T  I+I G     K++EA++F    K  G+ P
Sbjct: 541 GCCGNKKLDEAFMFMDEMVKKGLKPDNYTYSILIRGLLNMNKVEEAIQFWGDCKRNGMIP 600

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++  ++++I G  +    +   ++   M    + P+ + Y+ ++ A+  +G +    E+ 
Sbjct: 601 DVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLIGAYCRSGRLSMALELR 660

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           +DM   GI P++  Y+ L KG       E+A+ LL  M   G  PNV  +T +I G+   
Sbjct: 661 EDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLLEEMRMEGLEPNVFHYTALIDGYGKL 720

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G M +   +  +M    V PN  T+  ++ GY+       A  +L  M+  G+ P   T+
Sbjct: 721 GQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLHEMREKGIVPDSITY 780



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 92/341 (26%), Positives = 164/341 (48%), Gaps = 7/341 (2%)

Query: 111 TTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE 170
           TTL++ L    + +    +  +    G   D+   NA+++   E+G +EE      ++  
Sbjct: 466 TTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEAGKLEEGFRIQKEILG 525

Query: 171 SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
            G      +YNTLI G     K +E+   +D M ++G +KP+  TY++L+R   N   + 
Sbjct: 526 RGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKG-LKPDNYTYSILIRGLLNMNKVE 584

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
           EA         +GM PDV TY+ +     +    ++ +++  EM  N +QPN      +I
Sbjct: 585 EAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEMMSNNLQPNTVVYNHLI 644

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR-- 348
             YC+ G++  AL     MK  G+ PN   +  LIKG + I+ R  V+E   L++E R  
Sbjct: 645 GAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKG-MSIISR--VEEAKLLLEEMRME 701

Query: 349 -VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            + P+V  Y+ +++ +   G M K + +  +M    + P+   Y+++  GY R+    +A
Sbjct: 702 GLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEA 761

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             LL  M E G  P+ + +   I G+   G + +A +  D+
Sbjct: 762 SRLLHEMREKGIVPDSITYKEFIYGYLKQGGVLQAFKGSDE 802



 Score =  122 bits (307), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 161/363 (44%), Gaps = 45/363 (12%)

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A+D F  +   G+ P+ +T N L+     A + ++  +   ++ +   V P++  +   +
Sbjct: 202 ALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCK--GVSPDVYLFTTAI 259

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
            A+C    + EA  +  KM  +G+ P+VVTYNT+      +G  D+A     +M   GV+
Sbjct: 260 NAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVE 319

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P   T  I++ G  K  +I +A    + M E G  PN++++N LI   +E          
Sbjct: 320 PTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIE---------- 369

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
                                    AG ++K  EI D M   G+   +  Y+ L KGY +
Sbjct: 370 -------------------------AGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCK 404

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
             + + AE LL  M+  GF+ N   FT++I   CS    D A+    +M    +SP    
Sbjct: 405 SGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFVGEMLLRNMSPGGGL 464

Query: 461 FETLMWGYSEARQPWRAEEI-LQIM-KAFGVHPQKSTFLL--LAEARRATGLTKEAKRIL 516
             TL+ G  +  +  +A E+ L+ + K F V  + S  LL  L EA    G  +E  RI 
Sbjct: 465 LTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEA----GKLEEGFRIQ 520

Query: 517 SKI 519
            +I
Sbjct: 521 KEI 523



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 89/418 (21%), Positives = 165/418 (39%), Gaps = 37/418 (8%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           GM P     N ++ +   +   ++  + F  + + G++P    + T I  +   GK EE+
Sbjct: 213 GMFPSKTTCNILLTSLVRATEFQKCCEAFHVVCK-GVSPDVYLFTTAINAFCKGGKVEEA 271

Query: 197 VKLLDLMSREGNVKPNLRTYN-----------------------------------VLVR 221
           ++L   M  E  V PN+ TYN                                   +LV+
Sbjct: 272 IELFSKME-EAGVVPNVVTYNTVIDGLGMSGRYDEAFMFKEKMVERGVEPTLITYSILVK 330

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
                K I +A+ V+ +M   G  P+V+ YN +  +  + G  ++A E+   M   G+  
Sbjct: 331 GLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNLIDSLIEAGSLNKAIEIKDLMVSKGLSL 390

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
              T   +I GYCK G+   A R  + M   G + N   F  +I         D     +
Sbjct: 391 TSSTYNTLIKGYCKSGQADIAERLLKEMLSIGFNVNQGSFTSVICLLCSHHMFDSALRFV 450

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M    ++P     +T+++     G   K  E++      G   D    + L  G    
Sbjct: 451 GEMLLRNMSPGGGLLTTLISGLCKHGKHSKAVELWLKFLNKGFLVDTKTSNALLHGLCEA 510

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            + E+   +   ++  GF  + V + T+ISG C +  +D A    D+M + G+ P+  T+
Sbjct: 511 GKLEEGFRIQKEILGRGFVMDRVSYNTLISGCCGNKKLDEAFMFMDEMVKKGLKPDNYTY 570

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             L+ G     +   A +     K  G+ P   T+ ++ +       T+E +++  ++
Sbjct: 571 SILIRGLLNMNKVEEAIQFWGDCKRNGMIPDVYTYSVMIDGCCKAERTEEGQKLFDEM 628



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/247 (25%), Positives = 109/247 (44%), Gaps = 39/247 (15%)

Query: 288 IIISGYCKEGK---IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           ++I  YC + K      AL     +   G+ P+    N+L+   V   +     E   ++
Sbjct: 185 LLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHVV 244

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH--------------- 389
            +  V+PDV  ++T +NA+   G +++  E+F  M +AG+ P+                 
Sbjct: 245 CK-GVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGRY 303

Query: 390 --------------------AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
                                YSIL KG  + +    A  +L  M E GF PNV+++  +
Sbjct: 304 DEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPPNVIVYNNL 363

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I      GS+++AIE+ D M   G+S    T+ TL+ GY ++ Q   AE +L+ M + G 
Sbjct: 364 IDSLIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKSGQADIAERLLKEMLSIGF 423

Query: 490 HPQKSTF 496
           +  + +F
Sbjct: 424 NVNQGSF 430



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 83/173 (47%), Gaps = 4/173 (2%)

Query: 322 NLLIKGFVEIMDRDGVD---EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           +LLI+ +     RDG     +V  ++    + P   T + ++ +   A    KC E F  
Sbjct: 184 DLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRATEFQKCCEAFHV 243

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           + K G+ PD + ++     + +  + E+A EL   M E+G  PNVV + T+I G    G 
Sbjct: 244 VCK-GVSPDVYLFTTAINAFCKGGKVEEAIELFSKMEEAGVVPNVVTYNTVIDGLGMSGR 302

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            D A    +KM E GV P L T+  L+ G ++A++   A  +L+ M   G  P
Sbjct: 303 YDEAFMFKEKMVERGVEPTLITYSILVKGLTKAKRIGDAYCVLKEMTEKGFPP 355


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 139/546 (25%), Positives = 250/546 (45%), Gaps = 49/546 (8%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           TY+T++  L  Q++       +   E   + P  + FN++++++ + G ++ A   F  +
Sbjct: 208 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTV 267

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
            + GL P+  ++N LI G  + G   E+++L   M++ G V+P+  TYN+LV+ +     
Sbjct: 268 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHG-VEPDSVTYNILVKGFHLLGM 326

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT-CG 287
           I+ A  V+  M   G+ PDV+TY  +     Q G  D    ++ +M   G +        
Sbjct: 327 ISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYS 386

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           +++SG CK G++ EAL     ++ YG+ P+LV ++++I G  ++   D    V   M   
Sbjct: 387 VMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYK 446

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
           R+ P+  T   IM      G + + + + D +  +G   D   Y+I+  GY +    E+A
Sbjct: 447 RILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEA 506

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            EL    IESG  PNV  F ++I G+C   ++  A ++ D +  +G+ P++ ++ TLM  
Sbjct: 507 LELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDA 566

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK----------RILS 517
           Y+        EE+ + MKA G+ P   T+ ++ +     GL +  K          RIL 
Sbjct: 567 YANCGSIKSIEELRREMKAEGIPPTNVTYSVIFK-----GLCRGWKLENCNQVLRERILE 621

Query: 518 KIKNKERTNEMEAEEDIP--------VESLERLYH---------------KEATTASYPN 554
           K  +  R  +ME+E   P        ++ L R+ H                + T+A+Y  
Sbjct: 622 KFNHVLR--DMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATY-- 677

Query: 555 LLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQ 614
                N++           K  R L      ++  S FA T++  +H  K    + +I  
Sbjct: 678 -----NILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILF 732

Query: 615 KQPLGQ 620
            Q L +
Sbjct: 733 NQLLDR 738



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 116/443 (26%), Positives = 206/443 (46%), Gaps = 49/443 (11%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S   +M+S  + G    A++ F  +++ G  PS+ ++  L+  L +         + 
Sbjct: 240 SVVSFNSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELA 299

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S + ++G++PDS+ +N ++  F   G +  A +    M + GL+P   TY  L+ G    
Sbjct: 300 SDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQL 359

Query: 191 GKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           G  +  + LL D++SR   +K ++  Y+V++   C    + EA ++ + + A G+ PD+V
Sbjct: 360 GNIDMGLILLKDMLSRGFELK-SIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLV 418

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG---------------------- 287
            Y+ +     + G+ D A  V  EM +  + PN RT G                      
Sbjct: 419 AYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSL 478

Query: 288 -------------IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
                        I+I GY K G I+EAL   +   E G+ PN+  FN LI G+ +  + 
Sbjct: 479 ISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNI 538

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
               ++L ++K + + P V++Y+T+M+A++  G +   +E+  +M   GI P    YS++
Sbjct: 539 AEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVI 598

Query: 395 AKGY------------VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
            KG             +RE+  EK   +L  M   G  P+ + + TII   C    + RA
Sbjct: 599 FKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRA 658

Query: 443 IEVFDKMCEHGVSPNLKTFETLM 465
            E+F KM    + P   T+  L+
Sbjct: 659 FELFKKMKSQNLDPTSATYNILI 681



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 202/436 (46%), Gaps = 23/436 (5%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           +++   + +++ L + G+  EA ++F +L   G  P LV Y+ ++  L    +F+    +
Sbjct: 380 KSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRV 439

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++    + P+S    A++    + G + EA      +  SG T     YN +I GY  
Sbjct: 440 YDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAK 499

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +G  EE+++L   ++ E  + PN+ T+N L+  +C  +NI EA  ++  +   G+ P VV
Sbjct: 500 SGCIEEALELFK-VAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVV 558

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK---EALR-- 304
           +Y T+  AYA  G     EE+  EM+  G+ P   T  +I  G C+  K++   + LR  
Sbjct: 559 SYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRER 618

Query: 305 -------FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
                    R M+  G+ P+ + +N +I+    +       E+   MK   ++P   TY+
Sbjct: 619 ILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYN 678

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            ++++    G + K       + K  +     AY+ + K +  + +PE A  L   +++ 
Sbjct: 679 ILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLDR 738

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           GF+ ++  ++ +I+  C       +   F  M   G+SP+L   E ++          ++
Sbjct: 739 GFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDLDICEVMI----------KS 788

Query: 478 EEILQIMKAFGVHPQK 493
           +E+L     +G+ P +
Sbjct: 789 DELLSWTIKWGLLPDQ 804



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 105/424 (24%), Positives = 196/424 (46%), Gaps = 34/424 (8%)

Query: 110 YTTLLAALTI--QKRFNSIHSIMSQV------------------EENGMDPDSIFFNAVI 149
           ++TLL +     Q+RF  +  I+ Q+                  E  G+  D + F +  
Sbjct: 96  FSTLLVSHIFAGQRRFKELQVILEQLLQEEGKLCELLSNSFRKWESTGLVWDMLLFLS-- 153

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
              S    ++E++    KMK+  L  +T +YN+++  +       E+ K+ D+     + 
Sbjct: 154 ---SRLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNF------RETDKMWDVYKEIKD- 203

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
             N  TY+ +V   C ++ + +A   +       + P VV++N+I ++Y + G  D A+ 
Sbjct: 204 -KNEHTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKS 262

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
               +   G+ P+  +  I+I+G C  G I EAL  A  M ++GV P+ V +N+L+KGF 
Sbjct: 263 FFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFH 322

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
            +    G  EV+  M +  ++PDVITY+ ++      G +D    +  DM   G +  + 
Sbjct: 323 LLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSI 382

Query: 390 A-YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             YS++  G  +    ++A  L   +   G  P++V ++ +I G C  G  D A+ V+D+
Sbjct: 383 IPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDE 442

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           MC   + PN +T   +M G  +      A  +L  + + G       + ++ +    +G 
Sbjct: 443 MCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGC 502

Query: 509 TKEA 512
            +EA
Sbjct: 503 IEEA 506



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 85/190 (44%), Gaps = 12/190 (6%)

Query: 337 VDEVLALMKEFR---VNPDVITYSTIM-NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           VDE L ++K+ +   +N    +Y++++ N   T    D  KEI D         + H YS
Sbjct: 159 VDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEIKD--------KNEHTYS 210

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            +  G  R+Q+ E A   L T       P+VV F +I+S +C  G +D A   F  + + 
Sbjct: 211 TVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTVLKC 270

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G+ P++ +   L+ G         A E+   M   GV P   T+ +L +     G+   A
Sbjct: 271 GLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGA 330

Query: 513 KRILSKIKNK 522
             ++  + +K
Sbjct: 331 GEVIQDMLDK 340


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 227/487 (46%), Gaps = 45/487 (9%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           L+N   +  +  EA+ +F  + +GG  +P+LVTY+ L+              ++ ++E  
Sbjct: 155 LVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMERE 214

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK---- 192
           G+  D   ++++I+AF   G++E   + F +M    ++P   TY+ L++G G  G+    
Sbjct: 215 GLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREA 274

Query: 193 -------------PE------------------ESVKLLDLMSREGNVKPNLRTYNVLVR 221
                        P+                  +++K+LDLM ++G  +P   TYNV+V 
Sbjct: 275 SEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGE-EPGTLTYNVVVN 333

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV--IVEMEHNGV 279
             C E  + +A+ V+  M   G KPD VTYNT+       G+  +A ++  ++  E   V
Sbjct: 334 GLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHV 393

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           +P+  TC  +I G CKEG++ +A R   +M E G+  N+V +N LI+G++       + E
Sbjct: 394 KPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARK---LIE 450

Query: 340 VLALMK---EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            L L K   E   +P+ +TYS ++N       +   + +F  M  +GI+P    Y+ L  
Sbjct: 451 ALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMT 510

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
              RE   E+A  L   M     + +VV F  II G    G +  A E+  +M    + P
Sbjct: 511 SLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVP 570

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +  TF  L+  +S+      A  + + M + G  P    F  L +     G T++   +L
Sbjct: 571 DAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLL 630

Query: 517 SKIKNKE 523
            ++ +K+
Sbjct: 631 HQMADKD 637



 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 210/450 (46%), Gaps = 4/450 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L+++L +  +     ++++ ++     P   + + L  +       +   S++S + +
Sbjct: 46  STLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSVLSLMTK 105

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES--GLTPTTSTYNTLIKGYGIAGKP 193
            G   +    N V+  F  SG  ++AM  F +MK +   + P   TYNTL+ G+  A + 
Sbjct: 106 RGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRL 165

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+  L + M + G+ +PNL TY+VL+  +C    + E   ++ +M   G+K DV  Y++
Sbjct: 166 AEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSS 225

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           + +A+   G+ +   E+  EM    V PN  T   ++ G  + G+ +EA    + M   G
Sbjct: 226 LISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARG 285

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           V P++V + +L  G  +        +VL LM +    P  +TY+ ++N       MD   
Sbjct: 286 VRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAF 345

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH--PNVVIFTTIIS 431
            + + M K G KPDA  Y+ L KG     +  +A +L   ++   FH  P+V     +I 
Sbjct: 346 GVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQ 405

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C +G +  A  +   M E G+  N+ T+  L+ GY  AR+   A ++ +     G  P
Sbjct: 406 GLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSP 465

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKN 521
              T+ ++        +   A+ +  K+K+
Sbjct: 466 NSMTYSVMINGLCKMQMLSVARGLFCKMKD 495



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 212/457 (46%), Gaps = 14/457 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH--KPSLVTYTTLLAALTIQKRFNSIHSI 129
           V ++  ++      G+  +A ++F+ +        P  VTY TL+      KR      +
Sbjct: 112 VYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVL 171

Query: 130 MSQVEENG-MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
              +++ G   P+ + ++ +I+ + +SG + E +    +M+  GL      Y++LI  + 
Sbjct: 172 FEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFC 231

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G  E   +L D M R   V PN+ TY+ L++         EA  ++  M A G++PDV
Sbjct: 232 GEGDIETGRELFDEMLRR-KVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDV 290

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           V Y  +A    +NG A  A +V+  M   G +P   T  ++++G CKE ++ +A      
Sbjct: 291 VAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEM 350

Query: 309 MKEYGVHPNLVIFNLLIKGFV------EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           M + G  P+ V +N L+KG        E MD       L L ++F V PDV T + ++  
Sbjct: 351 MVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDL----WKLLLSEKFHVKPDVFTCNNLIQG 406

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G +     I   M + G++ +   Y+ L +GY+  ++  +A +L    +ESGF PN
Sbjct: 407 LCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPN 466

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            + ++ +I+G C    +  A  +F KM + G+ P +  +  LM          +A  + Q
Sbjct: 467 SMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQ 526

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            M+    +    +F ++ +     G  K AK +LS++
Sbjct: 527 EMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEM 563



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/428 (25%), Positives = 202/428 (47%), Gaps = 7/428 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + LM  L   G+ +EA  +  ++   G +P +V YT L   L    R      ++ 
Sbjct: 255 VVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLD 314

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G +P ++ +N V+N   +   M++A      M + G  P   TYNTL+KG   AG
Sbjct: 315 LMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGAG 374

Query: 192 KPEESVKLLDLM-SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           K  E++ L  L+ S + +VKP++ T N L++  C E  + +A  +   M   G++ ++VT
Sbjct: 375 KIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNIVT 434

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +   Y    +  +A ++      +G  PN  T  ++I+G CK   +  A      MK
Sbjct: 435 YNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGLFCKMK 494

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
           + G+ P ++ +N L+         D +++  +L +E R    N DV++++ I++    AG
Sbjct: 495 DSGIRPTVIDYNALMTSLCR---EDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLKAG 551

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +   KE+  +M    + PDA  +SIL   + +    ++A  L   M+  G  P VV+F 
Sbjct: 552 DVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVVFD 611

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +++ G+   G  ++ I +  +M +  V  + K   T++       +    E+IL      
Sbjct: 612 SLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCHMSRNLDVEKILPKFSQQ 671

Query: 488 GVHPQKST 495
             H  K T
Sbjct: 672 SEHTSKGT 679



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/229 (29%), Positives = 116/229 (50%), Gaps = 13/229 (5%)

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVN-----PDVIT 355
           A      M + G   N+   NL++KGF     R G  D+ ++L  + + N     PD +T
Sbjct: 96  AFSVLSLMTKRGFGVNVYNLNLVLKGFC----RSGQCDKAMSLFSQMKRNYDCVVPDCVT 151

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAG-IKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           Y+T++N +  A  + + + +F+ M K G  +P+   YS+L   Y +  E  +   LL  M
Sbjct: 152 YNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEM 211

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
              G   +V +++++IS +C +G ++   E+FD+M    VSPN+ T+  LM G     + 
Sbjct: 212 EREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGR- 270

Query: 475 WR-AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           WR A E+L+ M A GV P    + +LA+     G   +A ++L  +  K
Sbjct: 271 WREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQK 319



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 44/160 (27%), Positives = 81/160 (50%), Gaps = 2/160 (1%)

Query: 62  FCMNKESC--RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           FC  K+S    TV     LM SL      ++A+++F  +    H   +V++  ++     
Sbjct: 490 FCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVSFNIIIDGTLK 549

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
                S   ++S++    + PD++ F+ +IN FS+ G ++EAM  + KM   G  P    
Sbjct: 550 AGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMVSCGHVPGVVV 609

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           +++L+KGYG+ G+ E+ + LL  M+ +  V  +  T  +L
Sbjct: 610 FDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTIL 649


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 110/405 (27%), Positives = 205/405 (50%), Gaps = 11/405 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT----IQKRFNSIHSI 129
           ++T +M  L   G+ ++A    ++++  G     VTY TL+  L      ++ F  +H +
Sbjct: 150 TLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKM 209

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             QV    + P+ + +N +++   + G + EA D +  +   G+ P   TY  LI G+  
Sbjct: 210 EGQV----VRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCG 265

Query: 190 AGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            G+  E  +LL D++ R  NV  N+ TYN+L+ A C +  + +A ++ + M   G +PD+
Sbjct: 266 LGQWREVTRLLCDMVDR--NVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDL 323

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VT+NT+ + Y    +  +A ++       G+ P+  +  I+I GYCK  +I EAL     
Sbjct: 324 VTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNK 383

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M    + PN+V ++ LI G  +        E+ + + +   +P+VITY+ +++A      
Sbjct: 384 MNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQL 443

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +DK  E+F+ M + G+ P+  +Y+IL  GY + +  ++A  L   M      P+ V +  
Sbjct: 444 VDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNC 503

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           +I G C  G +  A E+F+ M + G   ++ T+  L   +S+ + 
Sbjct: 504 LIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSKIQH 548



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 209/434 (48%), Gaps = 1/434 (0%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            +A A+F  LI     PS+V +  +L ++   K + +  S+  Q+   G+ P  +  + +
Sbjct: 60  DDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSIL 119

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           IN +   G+M  A      + + G      T  T++KG  I G+  ++++  D +  +G 
Sbjct: 120 INCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGF 179

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           +   + TY  L+   C      EA+ ++HKM    ++P+VV YN I     ++G   +A 
Sbjct: 180 LLDEV-TYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEAR 238

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           ++  ++   G+ P+  T   +I G+C  G+ +E  R    M +  V+ N+  +N+LI   
Sbjct: 239 DLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDAL 298

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +        ++  LM E    PD++T++T+M+ +     + + +++FD   + GI PD 
Sbjct: 299 CKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDV 358

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
            +Y+IL  GY +    ++A  L   M      PN+V ++++I G C  G +  A E+F  
Sbjct: 359 WSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSA 418

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           + + G SPN+ T+  ++    + +   +A E+  +M   G+ P  S++ +L      +  
Sbjct: 419 IHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKR 478

Query: 509 TKEAKRILSKIKNK 522
             EA  +  ++  +
Sbjct: 479 IDEAMNLFEEMHRR 492



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/412 (25%), Positives = 188/412 (45%), Gaps = 3/412 (0%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G  PS+VT + L+             S++  V + G   ++I    ++     +G + +A
Sbjct: 108 GITPSIVTLSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKA 167

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV-KPNLRTYNVLV 220
           ++    +   G      TY TLI G    G   E+ +LL  M  EG V +PN+  YN++V
Sbjct: 168 LEFHDSVVAQGFLLDEVTYGTLINGLCKIGLTREAFELLHKM--EGQVVRPNVVIYNMIV 225

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
              C +  +TEA ++   +   G+ PDV TY  +   +   G+  +   ++ +M    V 
Sbjct: 226 DGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVN 285

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
            N  T  I+I   CK+G + +A      M E G  P+LV FN L+ G+    D     ++
Sbjct: 286 LNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKL 345

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
                E  + PDV +Y+ ++  +     +D+   +F+ M    + P+   YS L  G  +
Sbjct: 346 FDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCK 405

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
                 A EL   + + G  PNV+ +  ++   C    +D+AIE+F+ M E G++PN+ +
Sbjct: 406 SGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSS 465

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           +  L+ GY ++++   A  + + M    + P   T+  L +    +G    A
Sbjct: 466 YNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHA 517



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 76/313 (24%), Positives = 142/313 (45%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P++  +N+++ +    K+   A ++  +M   G+ P +VT + +   Y   G    A  V
Sbjct: 76  PSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +  +   G Q N  T   I+ G C  G++++AL F  ++   G   + V +  LI G  +
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           I       E+L  M+   V P+V+ Y+ I++     G + + ++++ D+   GI PD   
Sbjct: 196 IGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFT 255

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ L  G+    +  +   LL  M++   + NV  +  +I   C  G + +A ++ + M 
Sbjct: 256 YTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMI 315

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E G  P+L TF TLM GY        A ++       G+ P   ++ +L           
Sbjct: 316 ERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRID 375

Query: 511 EAKRILSKIKNKE 523
           EA  + +K+  K+
Sbjct: 376 EALSLFNKMNYKK 388



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 42/152 (27%), Positives = 84/152 (55%), Gaps = 1/152 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + + L++ L + G+   A  +F+ + +GG  P+++TY  +L AL   +  +    + +
Sbjct: 393 IVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFN 452

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + E G+ P+   +N +IN + +S  ++EAM+ F +M    L P + TYN LI G   +G
Sbjct: 453 LMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLIDGLCKSG 512

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
           +   + +L ++M  +G    ++ TYN+L  A+
Sbjct: 513 RISHAWELFNVM-HDGGPPVDVITYNILFDAF 543


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/485 (24%), Positives = 225/485 (46%), Gaps = 43/485 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++     G+  +A  +  ++      P   TY T+L  L   K++     +M 
Sbjct: 184 VVTYTALIDGYCRSGRLADALRLIASMPVA---PDTYTYNTVLKGLCCAKQWEQAEELMR 240

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  N   P+ + F   I AF ++G ++ A++   +M + G TP    Y+TL+ G+   G
Sbjct: 241 EMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHG 300

Query: 192 KPEESVKLLDLMSREGN-------------------------------VKPNLRTYNVLV 220
           + +E++KLL+ M    N                                 PN  T++ L+
Sbjct: 301 RVDEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLI 360

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
            + C  + +  A  V+ +M   G  PDVV+YNTI + ++    AD A +++  M     +
Sbjct: 361 NSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CK 417

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+  +   ++   CK  +  +A+     M +     N + FN+LI    +        EV
Sbjct: 418 PDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEV 477

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
             LM ++R  PD++TYS+++N +S  G  +   ++F  M     + D  +Y+   KG   
Sbjct: 478 FELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFSYNATLKGLCM 534

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
               + A EL+  M+     PN V F  +IS  C  G ++RAI+V+++M ++G++P++ T
Sbjct: 535 AARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFT 594

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  L+ GYSE     R ++ L+ +      P   ++  + +        K+A+++++++ 
Sbjct: 595 YNALINGYSEQ---GRLDDALKFLSTMPCEPDTISYNSILKGLCRAERWKDAEKLVTEML 651

Query: 521 NKERT 525
            K  T
Sbjct: 652 RKNCT 656



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 108/447 (24%), Positives = 204/447 (45%), Gaps = 19/447 (4%)

Query: 70  RTVRSMTKLMNS----LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           RT+R + +L N      +  G P    A  ++  E    P++++   L+  L  ++R   
Sbjct: 78  RTLRRLVELDNLDAALRLLLGGPSSTPATSDSAPE---PPAVISCNILIKKLCARRRLAD 134

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              ++  ++ +G   D++  N ++  +   G++ +A       + SG T    TY  LI 
Sbjct: 135 AERVLEALKASGA-ADAVSHNTLVAGYCRDGSLGDAERVVEAARASG-TANVVTYTALID 192

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           GY  +G+  ++++L+  M     V P+  TYN +++  C  K   +A  +M +M  +   
Sbjct: 193 GYCRSGRLADALRLIASMP----VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCH 248

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P+ VT+ T   A+ QNG  D+A E++ +M   G  P+      +++G+ + G++ EAL+ 
Sbjct: 249 PNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKL 308

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
             TM      PN V +N  +KG       + V E++A M      P+  T+ST++N+   
Sbjct: 309 LNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQ 365

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
              ++   E+ + M K G  PD  +Y+ +   +  +   + A +LL +M+     P+ + 
Sbjct: 366 NRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTIS 422

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           F  ++   C       A+E+  KM +     N  TF  L+    +  Q   A E+ ++M 
Sbjct: 423 FNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMP 482

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEA 512
            +   P   T+  L       GL + A
Sbjct: 483 KYRCMPDIVTYSSLINGFSEQGLDEMA 509



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/285 (20%), Positives = 138/285 (48%), Gaps = 10/285 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   +++   ++ +  +A  +  +++    KP  +++  +L  L   KR+     +++
Sbjct: 388 VVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVA 444

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +     + + FN +I++  ++G +++A++ F  M +    P   TY++LI G+   G
Sbjct: 445 KMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQG 504

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E +  L     R    + ++ +YN  ++  C      +A  ++  M      P+ VT+
Sbjct: 505 LDEMAFDLF----RSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTF 560

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N + ++  Q G  ++A +V  +M   G+ P+  T   +I+GY ++G++ +AL+F  TM  
Sbjct: 561 NILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMP- 619

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
               P+ + +N ++KG          ++++  M      P+ +T+
Sbjct: 620 --CEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 662


>gi|449453081|ref|XP_004144287.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
 gi|449489420|ref|XP_004158306.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Cucumis sativus]
          Length = 720

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 103/433 (23%), Positives = 218/433 (50%), Gaps = 3/433 (0%)

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           +F ++++   T  +   L+ +       ++A  + + + + G +   + Y+ ++ +LT  
Sbjct: 198 AFILSQKQTLTPLTYNALIGACARNNDLEKALNLMSRMRQDGFQSDFINYSLIIQSLTRT 257

Query: 121 KRFNS--IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
            + +   +  +  ++E + ++ D +  N +I  F+++G+   A+     ++ SGL P TS
Sbjct: 258 NKIDIPLLQKLYEEIESDKIELDGLLLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTS 317

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           T+  +I   G  G+ EE+  + + M +EG +KP ++ +N L++ +  + ++ EA +++ +
Sbjct: 318 TFVAVISALGNHGRTEEAEAIFEEM-KEGGLKPRIKAFNALLKGYARKGSLKEAESIISE 376

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  SG+ PD  TY  +  AYA  G  + A  ++ +ME   VQPN      I++ Y   G+
Sbjct: 377 MEKSGLSPDEHTYGLLVDAYANVGRWESARHLLKQMEARNVQPNTFIFSRILASYRDRGE 436

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
            ++     R MK   V P+   +N++I  F +    D   E    M    + PDV+T++T
Sbjct: 437 WQKTFEVLREMKNSNVKPDRHFYNVMIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNT 496

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++     G+ D+  E+F++M + G  P    Y+I+      +++ ++ + LL  M   G
Sbjct: 497 LIDCHRKHGYHDRAAELFEEMQERGYLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQG 556

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PNVV +TT++  +   G  + AI+  + M   G+ P+   +  L+  +++     +A 
Sbjct: 557 LLPNVVTYTTLVDIYGHSGRFNDAIDCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAV 616

Query: 479 EILQIMKAFGVHP 491
              ++M + G+ P
Sbjct: 617 NAYRVMISDGLRP 629



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 185/392 (47%), Gaps = 5/392 (1%)

Query: 78  LMNSLI----ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           L+N +I    + G P  A    + +   G  P   T+  +++AL    R     +I  ++
Sbjct: 283 LLNDIILGFAKAGDPNRALYFLSMVQASGLNPKTSTFVAVISALGNHGRTEEAEAIFEEM 342

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +E G+ P    FNA++  ++  G+++EA     +M++SGL+P   TY  L+  Y   G+ 
Sbjct: 343 KEGGLKPRIKAFNALLKGYARKGSLKEAESIISEMEKSGLSPDEHTYGLLVDAYANVGRW 402

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E +  LL  M    NV+PN   ++ ++ ++ +     + + V+ +M  S +KPD   YN 
Sbjct: 403 ESARHLLKQMEAR-NVQPNTFIFSRILASYRDRGEWQKTFEVLREMKNSNVKPDRHFYNV 461

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + +    D A E    M   G++P+  T   +I  + K G    A      M+E G
Sbjct: 462 MIDTFGKFNCLDHAMETYDRMLSEGIEPDVVTWNTLIDCHRKHGYHDRAAELFEEMQERG 521

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P    +N++I    E    D V  +L  M+   + P+V+TY+T+++ +  +G  +   
Sbjct: 522 YLPCPTTYNIMINSLGEQEKWDEVKILLGKMQSQGLLPNVVTYTTLVDIYGHSGRFNDAI 581

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           +  + M  AG+KP A  Y+ L   + +    E+A      MI  G  P+++   ++I+ +
Sbjct: 582 DCLEAMKSAGLKPSATMYNALINAFAQRGLSEQAVNAYRVMISDGLRPSLLALNSLINAF 641

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
             D     A  +   M E+ V P++ T+ TLM
Sbjct: 642 GEDRRDIEAFSILQYMKENDVKPDVVTYTTLM 673



 Score = 40.4 bits (93), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 40/71 (56%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ ++  L+N+  E  +  EA +I   + E   KP +VTYTTL+ AL    +F+ + ++ 
Sbjct: 630 SLLALNSLINAFGEDRRDIEAFSILQYMKENDVKPDVVTYTTLMKALIRVDKFDKVPAVY 689

Query: 131 SQVEENGMDPD 141
            ++  +G  PD
Sbjct: 690 EEMILSGCTPD 700


>gi|115482066|ref|NP_001064626.1| Os10g0421800 [Oryza sativa Japonica Group]
 gi|113639235|dbj|BAF26540.1| Os10g0421800, partial [Oryza sativa Japonica Group]
          Length = 973

 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/481 (25%), Positives = 221/481 (45%), Gaps = 37/481 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +VR+ + LM +  +R   +    +   +   G KP++ +YT  +  L   KRF+  + I+
Sbjct: 229 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRIL 288

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++E  G  PD I    +I    ++G + +A D FWKMK+S   P   TY TL+  +G  
Sbjct: 289 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDN 348

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +  +++ + M  +G    N+  Y  ++ A C    + EA  +  +M   G+ P+  +
Sbjct: 349 GDSQSVMEIWNAMKADG-YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 407

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++ + + +      A E+   M+ +G +PNG T  + I+ Y K G+  +A++    MK
Sbjct: 408 YNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK 467

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P++V  N ++ G  +         V   +K   V+PD ITY+ ++   S A   D
Sbjct: 468 SKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFD 527

Query: 371 KCKEIFDDMGKAGIKPDAHA-----------------------------------YSILA 395
           +  +IF DM +    PD  A                                   Y+ L 
Sbjct: 528 EAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLL 587

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G  RE + ++   LL  M  S + PN++ + TI+   C +G+++ A+++   M   G  
Sbjct: 588 AGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 647

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P+L ++ T+++G  +  +   A  I   MK   + P  +T   +  +    GL KEA  I
Sbjct: 648 PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHI 706

Query: 516 L 516
           +
Sbjct: 707 I 707



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 110/480 (22%), Positives = 210/480 (43%), Gaps = 36/480 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L + G+   A+ +F+ L   G  P  +TYT ++   +   +F+    I   + EN 
Sbjct: 481 VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 540

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD +  N++I+   ++G  +EA   F+++KE  L PT  TYNTL+ G G  GK +E +
Sbjct: 541 CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVM 600

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ M    N  PNL TYN ++   C    + +A ++++ M   G  PD+ +YNT+   
Sbjct: 601 HLLEEMYHS-NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 659

Query: 258 YAQNGEADQAEEVIVEMEHNGV-------------------------------QPNGRT- 285
             +    ++A  +  +M+   +                               QP  +T 
Sbjct: 660 LVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTD 719

Query: 286 ---CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
              C  ++ G  K+  I++++ FA  +   G+  +      LIK   +        E++ 
Sbjct: 720 RSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVK 779

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
             K F V+     Y++++        +D  + +F +M + G  PD   Y++L     +  
Sbjct: 780 KFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSM 839

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             E+  ++   M   G+    V + TIISG      +++AI+++  +   G SP   T+ 
Sbjct: 840 RIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYG 899

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            L+ G  +A +   AE +   M  +G     + + +L    R  G T++   +   + ++
Sbjct: 900 PLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQ 959



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 209/453 (46%), Gaps = 10/453 (2%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTT-----LLAALTIQKRF 123
           C   R+   ++++L     P EA   F +      KP  V +TT     +L  +    R 
Sbjct: 86  CDERRAAEDVIHALRSADGPAEALERFRS---AARKPR-VAHTTASCNYMLELMRGHGRV 141

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
             +  +   ++   +  +   F A+       G +  A      MKE+G+     TYN L
Sbjct: 142 GDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGL 201

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           +     +G   E++++  +M  +G V P++RTY+VL+ A+   +++     ++ +M A G
Sbjct: 202 VYFLVKSGFDREALEVYRVMMVDG-VVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHG 260

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           +KP+V +Y        Q    D+A  ++ +ME+ G +P+  T  ++I   C  G+I +A 
Sbjct: 261 VKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAK 320

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                MK+    P+ V +  L+  F +  D   V E+   MK    N +V+ Y+ +++A 
Sbjct: 321 DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDAL 380

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G + +  E+FD+M + GI P+ ++Y+ L  G+++      A EL   M   G  PN 
Sbjct: 381 CQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNG 440

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
                 I+ +   G   +AI+ ++ M   G+ P++     +++G +++ +   A+ +   
Sbjct: 441 YTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHE 500

Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +KA GV P   T+ ++ +         EA +I 
Sbjct: 501 LKAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 533



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 203/448 (45%), Gaps = 7/448 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L++ G  +EA  ++  ++  G  PS+ TY+ L+ A   ++   ++  ++ ++E +G
Sbjct: 201 LVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHG 260

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +   I    ++   +EA     KM+  G  P   T+  LI+    AG+  ++ 
Sbjct: 261 VKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAK 320

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCN---EKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            +   M ++ + KP+  TY  L+  + +    +++ E WN M    A G   +VV Y  +
Sbjct: 321 DVFWKM-KKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK---ADGYNDNVVAYTAV 376

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             A  Q G   +A E+  EM+  G+ P   +   +ISG+ K  +  +AL   + M  +G 
Sbjct: 377 IDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGP 436

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            PN     L I  + +  +     +   LMK   + PDV+  + ++   + +G +   K 
Sbjct: 437 KPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKR 496

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +F ++   G+ PD   Y+++ K   +  + ++A ++   MIE+   P+V+   ++I    
Sbjct: 497 VFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLY 556

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G  D A  +F ++ E  + P   T+ TL+ G     +      +L+ M      P   
Sbjct: 557 KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLI 616

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
           T+  + +     G   +A  +L  +  K
Sbjct: 617 TYNTILDCLCKNGAVNDALDMLYSMTTK 644



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 180/379 (47%), Gaps = 8/379 (2%)

Query: 148 VINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYN---TLIKGYGIAGKPEESVKLLDLM 203
           VI+A   +    EA++ F    ++  +  TT++ N    L++G+G  G   E   + D+M
Sbjct: 95  VIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAE---VFDVM 151

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            R+  VK N+ T+  +      E  +  A   +  M  +G+  +  TYN +     ++G 
Sbjct: 152 QRQ-IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGF 210

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
             +A EV   M  +GV P+ RT  +++  + K   ++  L   R M+ +GV PN+  + +
Sbjct: 211 DREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTI 270

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
            I+   +    D    +LA M+     PDVIT++ ++     AG +   K++F  M K+ 
Sbjct: 271 CIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSD 330

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
            KPD   Y  L   +    + +   E+   M   G++ NVV +T +I   C  G +  A+
Sbjct: 331 QKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEAL 390

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           E+FD+M + G+ P   ++ +L+ G+ +A +   A E+ + M   G  P   T +L     
Sbjct: 391 EMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYY 450

Query: 504 RATGLTKEAKRILSKIKNK 522
             +G + +A +    +K+K
Sbjct: 451 GKSGESIKAIQRYELMKSK 469



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 82/186 (44%)

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           EV  +M+   V  +V T++ I       G +         M +AGI  +A+ Y+ L    
Sbjct: 146 EVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFL 205

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           V+     +A E+   M+  G  P+V  ++ ++  +     ++  + +  +M  HGV PN+
Sbjct: 206 VKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNV 265

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            ++   +    +A++   A  IL  M+  G  P   T  +L +     G   +AK +  K
Sbjct: 266 YSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWK 325

Query: 519 IKNKER 524
           +K  ++
Sbjct: 326 MKKSDQ 331


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 214/447 (47%), Gaps = 12/447 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V+    ++ +L +  +  +  A+   +++ G +PS+VTY TLL +   + R + +  ++ 
Sbjct: 169 VKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLK 228

Query: 132 QVEENGMD--PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           ++E  G    P+ + +N VI   +  G++EEA +    M+ S    ++ TYN LI G   
Sbjct: 229 EMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KASSFTYNPLITGLLA 287

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G  ++   L   M  EG + P + TYN ++        +  A     +M A G+ PDV+
Sbjct: 288 RGCVKKVYDLQLEMENEG-IMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVI 346

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN++   Y + G   +A  +  ++   G+ P   T  I I GYC+ G ++EA      M
Sbjct: 347 TYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEM 406

Query: 310 KEYGVHPNLVIFNLLIKGFVEI----MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
            E G  PN+  + +L+KG + +    M R+  DE+L+      + PD   Y+T + A   
Sbjct: 407 GEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSK----GLQPDCFAYNTRICAELI 462

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G + +  E+ + +   GI  D   Y+IL  G  +    + A+EL M M+ +G  P+ + 
Sbjct: 463 LGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCIT 522

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +T +I   C  G +  A ++F+ M   G+ P+  TF  ++  Y      + A    + M 
Sbjct: 523 YTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKML 582

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEA 512
             GV P + T+ +L  A    G T+ A
Sbjct: 583 EEGVEPNEITYNVLIHALCRMGRTQLA 609



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 115/426 (26%), Positives = 189/426 (44%), Gaps = 18/426 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEG---GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           ++  L  +G  +EA      L+EG     K S  TY  L+  L  +     ++ +  ++E
Sbjct: 247 VITGLTRKGDLEEAA----ELVEGMRLSKKASSFTYNPLITGLLARGCVKKVYDLQLEME 302

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G+ P  + +NA+I+   +SG +E A   F +M+  GL P   TYN+L+ GY  AG  +
Sbjct: 303 NEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLK 362

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           E++ L   + R G + P + TYN+ +  +C   ++ EA  +  +M   G  P+V TY  +
Sbjct: 363 EALLLFGDLRRAG-LAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTIL 421

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQP-----NGRTCGIIISGYCKEGKIKEALRFARTM 309
                       A E   EM   G+QP     N R C  +I G      I  AL     +
Sbjct: 422 MKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILG-----DIARALELREVL 476

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G+  + V +N+LI G  +  +     E+   M    + PD ITY+ +++A    G +
Sbjct: 477 MLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLL 536

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            + ++IF++M   G+ P A  ++++   Y R      A      M+E G  PN + +  +
Sbjct: 537 REARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVL 596

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I   C  G    A   F +M E G+  N  T+  L+ G  +      A      M   G+
Sbjct: 597 IHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGI 656

Query: 490 HPQKST 495
           HP   T
Sbjct: 657 HPDYLT 662



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/391 (25%), Positives = 188/391 (48%), Gaps = 1/391 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L+ RG  ++   +   +   G  P++VTY  ++  L       +     +++   G
Sbjct: 281 LITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMG 340

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD I +N+++N + ++GN++EA+  F  ++ +GL PT  TYN  I GY   G  EE+ 
Sbjct: 341 LLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEAR 400

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L + M  +G + PN+ TY +L++   N  ++  A     +M + G++PD   YNT   A
Sbjct: 401 ILKEEMGEQGCL-PNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICA 459

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G+  +A E+   +   G+  +  T  I+I G CK G +K+A      M   G+ P+
Sbjct: 460 ELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD 519

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +  LI    E        ++   M    + P  +T++ I++A+   G +      F 
Sbjct: 520 CITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFR 579

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + G++P+   Y++L     R    + A      M+E G   N   +T +I G C  G
Sbjct: 580 KMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVG 639

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           + + A+  + +M ++G+ P+  T + L+ G+
Sbjct: 640 NWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/397 (25%), Positives = 191/397 (48%), Gaps = 10/397 (2%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           S   ++  +G+ PD    N V+ A  ++   ++      +M + G+ P+  TYNTL+  +
Sbjct: 155 SAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSF 214

Query: 188 GIAGKPEESVKLLDLMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
              G+ ++   LL  M   G+   PN  TYNV++     + ++ EA  ++  M  S  K 
Sbjct: 215 LKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KA 273

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRF 305
              TYN + T     G   +  ++ +EME+ G+ P   T   +I G  + G ++ A ++F
Sbjct: 274 SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKF 333

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNA 362
           A  M+  G+ P+++ +N L+ G+ +      + E L L  + R   + P V+TY+  ++ 
Sbjct: 334 AE-MRAMGLLPDVITYNSLLNGYCKA---GNLKEALLLFGDLRRAGLAPTVLTYNIRIDG 389

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +   G +++ + + ++MG+ G  P+   Y+IL KG +       A E    M+  G  P+
Sbjct: 390 YCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPD 449

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
              + T I      G + RA+E+ + +   G+S +  T+  L+ G  +      A+E+  
Sbjct: 450 CFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQM 509

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            M + G+ P   T+  L  A    GL +EA++I + +
Sbjct: 510 KMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNM 546



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 73/266 (27%), Positives = 128/266 (48%), Gaps = 2/266 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C   V + T LM   +       A+  F+ ++  G +P    Y T + A  I   
Sbjct: 406 MGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGD 465

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                 +   +   G+  D++ +N +I+   ++GN+++A +   KM  +GL P   TY  
Sbjct: 466 IARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTC 525

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI  +   G   E+ K+ + M  +G + P+  T+ V++ A+C   N+  A+    KM   
Sbjct: 526 LIHAHCERGLLREARKIFNNMISDG-LLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEE 584

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G++P+ +TYN +  A  + G    A     EM   G+  N  T  ++I G CK G  ++A
Sbjct: 585 GVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDA 644

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGF 328
           +RF   M + G+HP+ +    L+KGF
Sbjct: 645 MRFYFEMHQNGIHPDYLTHKALVKGF 670



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 53/239 (22%), Positives = 108/239 (45%), Gaps = 12/239 (5%)

Query: 293 YCKEGKIKEA---------LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
           Y KE K ++A         L   R M  +GV P++   N +++   +    D +  V   
Sbjct: 135 YSKECKARDATLDTCSTLCLSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEE 194

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK--AGIKPDAHAYSILAKGYVRE 401
           M +  + P ++TY+T+++++   G  DK   +  +M    +G  P+   Y+++  G  R+
Sbjct: 195 MLQLGIEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRK 254

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            + E+A EL+  M  S    +   +  +I+G  + G + +  ++  +M   G+ P + T+
Sbjct: 255 GDLEEAAELVEGMRLSK-KASSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTY 313

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
             ++ G  ++     A+     M+A G+ P   T+  L       G  KEA  +   ++
Sbjct: 314 NAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLR 372


>gi|78708657|gb|ABB47632.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1080

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 122/481 (25%), Positives = 221/481 (45%), Gaps = 37/481 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +VR+ + LM +  +R   +    +   +   G KP++ +YT  +  L   KRF+  + I+
Sbjct: 194 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRIL 253

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++E  G  PD I    +I    ++G + +A D FWKMK+S   P   TY TL+  +G  
Sbjct: 254 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDN 313

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +  +++ + M  +G    N+  Y  ++ A C    + EA  +  +M   G+ P+  +
Sbjct: 314 GDSQSVMEIWNAMKADG-YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 372

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++ + + +      A E+   M+ +G +PNG T  + I+ Y K G+  +A++    MK
Sbjct: 373 YNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK 432

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P++V  N ++ G  +         V   +K   V+PD ITY+ ++   S A   D
Sbjct: 433 SKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFD 492

Query: 371 KCKEIFDDMGKAGIKPDAHA-----------------------------------YSILA 395
           +  +IF DM +    PD  A                                   Y+ L 
Sbjct: 493 EAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLL 552

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G  RE + ++   LL  M  S + PN++ + TI+   C +G+++ A+++   M   G  
Sbjct: 553 AGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 612

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P+L ++ T+++G  +  +   A  I   MK   + P  +T   +  +    GL KEA  I
Sbjct: 613 PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHI 671

Query: 516 L 516
           +
Sbjct: 672 I 672



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 114/497 (22%), Positives = 211/497 (42%), Gaps = 77/497 (15%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L + G+   A+ +F+ L   G  P  +TYT ++   +   +F+    I   + EN 
Sbjct: 446 VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 505

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD +  N++I+   ++G  +EA   F+++KE  L PT  TYNTL+ G G  GK +E +
Sbjct: 506 CVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVM 565

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-------------- 243
            LL+ M    N  PNL TYN ++   C    + +A ++++ M   G              
Sbjct: 566 HLLEEMYHS-NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 624

Query: 244 --------------------MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
                               + PD  T  TI  ++ + G   +A  +I +     +QP  
Sbjct: 625 LVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYF---LQPGS 681

Query: 284 RT---------------CGI------------------------IISGYCKEGKIKEALR 304
           +T                GI                        +I   CK+ K  EA  
Sbjct: 682 KTDRSSCHSLMEGILKKAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHE 741

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
             +  K +GV     ++N LI G V+    D  + + A MKE    PD  TY+ +++A  
Sbjct: 742 LVKKFKSFGVSLKTGLYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMG 801

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
            +  +++  ++ ++M + G +     Y+ +  G V+ +  E+A +L   ++  GF P   
Sbjct: 802 KSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPC 861

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +  ++ G    G ++ A  +F++M E+G   N   +  L+ G+  A    +   + Q M
Sbjct: 862 TYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM 921

Query: 485 KAFGVHPQKSTFLLLAE 501
              G++P   ++ ++ +
Sbjct: 922 VDQGINPDIKSYTIIID 938



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 209/453 (46%), Gaps = 10/453 (2%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTT-----LLAALTIQKRF 123
           C   R+   ++++L     P EA   F +      KP  V +TT     +L  +    R 
Sbjct: 51  CDERRAAEDVIHALRSADGPAEALERFRS---AARKPR-VAHTTASCNYMLELMRGHGRV 106

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
             +  +   ++   +  +   F A+       G +  A      MKE+G+     TYN L
Sbjct: 107 GDMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGL 166

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           +     +G   E++++  +M  +G V P++RTY+VL+ A+   +++     ++ +M A G
Sbjct: 167 VYFLVKSGFDREALEVYRVMMVDG-VVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHG 225

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           +KP+V +Y        Q    D+A  ++ +ME+ G +P+  T  ++I   C  G+I +A 
Sbjct: 226 VKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAK 285

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                MK+    P+ V +  L+  F +  D   V E+   MK    N +V+ Y+ +++A 
Sbjct: 286 DVFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDAL 345

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G + +  E+FD+M + GI P+ ++Y+ L  G+++      A EL   M   G  PN 
Sbjct: 346 CQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNG 405

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
                 I+ +   G   +AI+ ++ M   G+ P++     +++G +++ +   A+ +   
Sbjct: 406 YTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHE 465

Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +KA GV P   T+ ++ +         EA +I 
Sbjct: 466 LKAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 498



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 203/448 (45%), Gaps = 7/448 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L++ G  +EA  ++  ++  G  PS+ TY+ L+ A   ++   ++  ++ ++E +G
Sbjct: 166 LVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHG 225

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +   I    ++   +EA     KM+  G  P   T+  LI+    AG+  ++ 
Sbjct: 226 VKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAK 285

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCN---EKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            +   M ++ + KP+  TY  L+  + +    +++ E WN M    A G   +VV Y  +
Sbjct: 286 DVFWKM-KKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK---ADGYNDNVVAYTAV 341

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             A  Q G   +A E+  EM+  G+ P   +   +ISG+ K  +  +AL   + M  +G 
Sbjct: 342 IDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGP 401

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            PN     L I  + +  +     +   LMK   + PDV+  + ++   + +G +   K 
Sbjct: 402 KPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKR 461

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +F ++   G+ PD   Y+++ K   +  + ++A ++   MIE+   P+V+   ++I    
Sbjct: 462 VFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLY 521

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G  D A  +F ++ E  + P   T+ TL+ G     +      +L+ M      P   
Sbjct: 522 KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLI 581

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
           T+  + +     G   +A  +L  +  K
Sbjct: 582 TYNTILDCLCKNGAVNDALDMLYSMTTK 609



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 211/450 (46%), Gaps = 15/450 (3%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            +++ L + G   +A  +  ++   G  P L +Y T++  L  ++R+N   SI  Q+++  
Sbjct: 586  ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV- 644

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT----STYNTLIKGYGIAGKP 193
            + PD      ++ +F + G M+EA+     +K+  L P +    S+ ++L++G       
Sbjct: 645  LIPDYATLCTILPSFVKIGLMKEALHI---IKDYFLQPGSKTDRSSCHSLMEGILKKAGI 701

Query: 194  EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+S++  ++++  G    +      L++  C +K   EA  ++ K  + G+      YN+
Sbjct: 702  EKSIEFAEIIASSGITLDDFFLCP-LIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNS 760

Query: 254  IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
            +          D AE +  EM+  G  P+  T  +++    K  +I+E L+    M   G
Sbjct: 761  LICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKG 820

Query: 314  VHPNLVIFNLLIKGFVEIMDRD-GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
                 V +N +I G V+    +  +D    LM +   +P   TY  +++    AG ++  
Sbjct: 821  YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQ-GFSPTPCTYGPLLDGLLKAGRIEDA 879

Query: 373  KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            + +F++M + G K +   Y+IL  G+      EK   L   M++ G +P++  +T II  
Sbjct: 880  ENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDT 939

Query: 433  WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
             C  G ++  +  F ++ E G+ P+L T+  L+ G  ++++   A  +   M+  G+ P 
Sbjct: 940  LCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPN 999

Query: 493  KSTF----LLLAEARRATGLTKEAKRILSK 518
              T+    L L +A +A    K  + +L+K
Sbjct: 1000 LYTYNSLILHLGKAGKAAEAGKMYEELLTK 1029



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/440 (24%), Positives = 193/440 (43%), Gaps = 3/440 (0%)

Query: 62   FC-MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNN-LIEGGHKPSLVTYTTLLAALTI 119
            FC M K       ++  ++ S ++ G  +EA  I  +  ++ G K    +  +L+  +  
Sbjct: 638  FCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK 697

Query: 120  QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
            +            +  +G+  D  F   +I    +     EA +   K K  G++  T  
Sbjct: 698  KAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGL 757

Query: 180  YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
            YN+LI G       + +  L   M +E    P+  TYN+L+ A      I E   V  +M
Sbjct: 758  YNSLICGLVDENLIDIAEGLFAEM-KELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM 816

Query: 240  AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
               G +   VTYNTI +   ++   +QA ++   +   G  P   T G ++ G  K G+I
Sbjct: 817  HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 876

Query: 300  KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            ++A      M EYG   N  I+N+L+ G     + + V  +   M +  +NPD+ +Y+ I
Sbjct: 877  EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 936

Query: 360  MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
            ++    AG ++     F  + + G++PD   Y++L  G  + +  E+A  L   M + G 
Sbjct: 937  IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 996

Query: 420  HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
             PN+  + ++I      G    A ++++++   G  PN+ T+  L+ GYS +     A  
Sbjct: 997  VPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYA 1056

Query: 480  ILQIMKAFGVHPQKSTFLLL 499
                M   G  P  ST++ L
Sbjct: 1057 AYGRMIVGGCLPNSSTYMQL 1076



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 180/379 (47%), Gaps = 8/379 (2%)

Query: 148 VINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNT---LIKGYGIAGKPEESVKLLDLM 203
           VI+A   +    EA++ F    ++  +  TT++ N    L++G+G  G   E   + D+M
Sbjct: 60  VIHALRSADGPAEALERFRSAARKPRVAHTTASCNYMLELMRGHGRVGDMAE---VFDVM 116

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            R+  VK N+ T+  +      E  +  A   +  M  +G+  +  TYN +     ++G 
Sbjct: 117 QRQ-IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGF 175

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
             +A EV   M  +GV P+ RT  +++  + K   ++  L   R M+ +GV PN+  + +
Sbjct: 176 DREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTI 235

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
            I+   +    D    +LA M+     PDVIT++ ++     AG +   K++F  M K+ 
Sbjct: 236 CIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSD 295

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
            KPD   Y  L   +    + +   E+   M   G++ NVV +T +I   C  G +  A+
Sbjct: 296 QKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEAL 355

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           E+FD+M + G+ P   ++ +L+ G+ +A +   A E+ + M   G  P   T +L     
Sbjct: 356 EMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYY 415

Query: 504 RATGLTKEAKRILSKIKNK 522
             +G + +A +    +K+K
Sbjct: 416 GKSGESIKAIQRYELMKSK 434



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/186 (22%), Positives = 82/186 (44%)

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           EV  +M+   V  +V T++ I       G +         M +AGI  +A+ Y+ L    
Sbjct: 111 EVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFL 170

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           V+     +A E+   M+  G  P+V  ++ ++  +     ++  + +  +M  HGV PN+
Sbjct: 171 VKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNV 230

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            ++   +    +A++   A  IL  M+  G  P   T  +L +     G   +AK +  K
Sbjct: 231 YSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWK 290

Query: 519 IKNKER 524
           +K  ++
Sbjct: 291 MKKSDQ 296


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 188/405 (46%), Gaps = 9/405 (2%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD--PDSIFFNAVINAFSESGNMEEA 161
           +P +VTY  L+  L    R      ++  +    +D  PD +  N V++   +SG ++EA
Sbjct: 169 RPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEA 228

Query: 162 MDTFWKMKES---GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
           +  F + + S   G  P T TYN LI  +   G    + +L++ M  EG V  N+ T N 
Sbjct: 229 L-AFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEG-VPQNIVTLNT 286

Query: 219 LVRAWCNEKNITEAWNVMH--KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           +V   C       A       +      K + VTY+T+  A         A E+  E   
Sbjct: 287 IVGGLCRAGRTGAALEFFREKRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMS 346

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G  P+      +ISG  + G++++A   A +MKE G   +   +N+LI GF        
Sbjct: 347 EGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHE 406

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             E+L  MKE  + PDV TY+T+++    AG      E+   M   G +P    +  L  
Sbjct: 407 AYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVH 466

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           GY +  + ++A  +L +M ESG HPN VI+ T+I   C  G +D AIE+FD+M E  V  
Sbjct: 467 GYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPA 526

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           N+ TF  L+ G  +   P +A E++  M+     P   T  +L E
Sbjct: 527 NVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLME 571



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/390 (28%), Positives = 188/390 (48%), Gaps = 10/390 (2%)

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           D   FN+++ A +   ++      +  M+  + + P   TY  L+ G   AG+  +++++
Sbjct: 135 DVFAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRV 194

Query: 200 LDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS--GMKPDVVTYNTIAT 256
           LD MSR+  +++P++ T N +V   C    + EA   + +  +S  G  P+ VTYN +  
Sbjct: 195 LDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLID 254

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A+ + G    A E++ +ME+ GV  N  T   I+ G C+ G+   AL F R  +   V P
Sbjct: 255 AFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRT--VWP 312

Query: 317 ----NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
               N V ++ L+   +   +     E+         +PD I Y T+++  + AG ++  
Sbjct: 313 EGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDA 372

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             +   M +AG K D  AY+IL  G+ R++   +A ELL  M E G  P+V  + T++SG
Sbjct: 373 CSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSG 432

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G      E+  KM + G  P++ TF TL+ GY +  +   A  IL+ M   G+HP 
Sbjct: 433 SCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPN 492

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              +  L +     G    A  +  ++K K
Sbjct: 493 NVIYNTLIDFLCKRGDVDLAIELFDEMKEK 522



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 1/251 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L+ +L+       A  +F+  +  GH P  + Y T+++ LT   R     S+ S ++E
Sbjct: 322 STLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKE 381

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G   D+  +N +I  F     + EA +   +MKE G+ P   TYNTL+ G   AG    
Sbjct: 382 AGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAA 441

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
             +LL  M  +G  +P++ T+  LV  +C    I EA  ++  M  SG+ P+ V YNT+ 
Sbjct: 442 VDELLGKMIDDG-CQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLI 500

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               + G+ D A E+  EM+   V  N  T   ++ G   +   ++A      M+E    
Sbjct: 501 DFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCF 560

Query: 316 PNLVIFNLLIK 326
           P+ V  ++L++
Sbjct: 561 PDYVTVDVLME 571


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 206/434 (47%), Gaps = 8/434 (1%)

Query: 80  NSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           N+++ R    EA  +F  L +     ++ +Y  LL  L    R      +    +E    
Sbjct: 239 NAVLSRLPLDEAIELFQGLPD----KNVCSYNILLKVLCGAGRVEDARQLF---DEMASP 291

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD + +  +I+ +   G +E A+     M   G+ P  + Y +++      G+  +++ +
Sbjct: 292 PDVVTYGILIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTV 351

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           ++ M     V  +   Y  ++  +CN+ ++  A     +M   G+  D VTY T+     
Sbjct: 352 VEDMVHH-KVILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLC 410

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           + GE  +AE+V+ EM    +  +  T  +++ GYCK GK+ EA +   TM + GV PN+V
Sbjct: 411 RAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVV 470

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
            +  L  G  +  D    +E+L  M    +  +  TY++++N    AG++D+      DM
Sbjct: 471 TYTALSDGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADM 530

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
             AG+KPD + Y+ L     +  E ++A +LL  M+++G  P +V +  +++G+C  G +
Sbjct: 531 DAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRV 590

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           +   ++ + M E  + PN  T+ +LM  Y          EI + M +  V P ++T+ +L
Sbjct: 591 EGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNIL 650

Query: 500 AEARRATGLTKEAK 513
            +        KEA+
Sbjct: 651 IKGHCKARSMKEAQ 664



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 213/451 (47%), Gaps = 38/451 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++     G+ + A  + ++++  G +P+   YT+++A L  + R +   +++  +  + 
Sbjct: 300 LIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHK 359

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   +  V++ F   G++  A   F +M+  GL     TY TLI G   AG+ +E+ 
Sbjct: 360 VILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAE 419

Query: 198 KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           K+L ++++R  +V  +  TY VLV  +C    + EA+ V + M   G+ P+VVTY  ++ 
Sbjct: 420 KVLQEMLARRLDV--DEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSD 477

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              + G+   A E++ EM + G++ N  T   +I+G CK G + +A+   RTM +     
Sbjct: 478 GLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAM---RTMAD----- 529

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
                          MD  G+             PDV TY+T+++A   +G +D+  ++ 
Sbjct: 530 ---------------MDAAGL------------KPDVYTYTTLIDALCKSGELDRAHDLL 562

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M   GIKP    Y++L  G+      E  ++LL  M+E   HPN   + +++  +C  
Sbjct: 563 QEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIG 622

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            +M    E++  MC   V PN  T+  L+ G+ +AR    A+     M   G     S++
Sbjct: 623 NNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSY 682

Query: 497 LLLAEARRATGLTKEAKRILSKIKNKERTNE 527
             L           EA+++   ++ +  T E
Sbjct: 683 SALIRLLNKKKKFVEARKLFHDMRKEGFTAE 713



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 181/379 (47%), Gaps = 1/379 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +++    +G    A+  F+ +   G     VTYTTL+  L           ++ ++  
Sbjct: 368 TTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLA 427

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             +D D + +  +++ + + G M EA      M + G+ P   TY  L  G    G  + 
Sbjct: 428 RRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQA 487

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +LL  MS +G ++ N  TYN L+   C    + +A   M  M A+G+KPDV TY T+ 
Sbjct: 488 ANELLHEMSNKG-LELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLI 546

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            A  ++GE D+A +++ EM  NG++P   T  ++++G+C  G+++   +    M E  +H
Sbjct: 547 DALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIH 606

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN   +N L+K +    +     E+   M    V P+  TY+ ++     A  M + +  
Sbjct: 607 PNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYF 666

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            ++M + G +  A +YS L +   ++++  +A +L   M + GF     ++   I    +
Sbjct: 667 HNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFN 726

Query: 436 DGSMDRAIEVFDKMCEHGV 454
           + +++  + + D++ E  +
Sbjct: 727 EDNLEATLALCDELVEASI 745


>gi|297606902|ref|NP_001059180.2| Os07g0213300 [Oryza sativa Japonica Group]
 gi|215767816|dbj|BAH00045.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255677604|dbj|BAF21094.2| Os07g0213300 [Oryza sativa Japonica Group]
          Length = 677

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 119/468 (25%), Positives = 224/468 (47%), Gaps = 39/468 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  +   ++N+    G  ++A  +   + E G  P LVT+  +L+AL    +++   S  
Sbjct: 80  TRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYF 139

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE--SGLTPTTSTYNTLIKGYG 188
             ++   +  D+   N +I+   + G   EA++ F  M+E  +   P   TY +++  Y 
Sbjct: 140 EIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYC 199

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
           I G+ E    + DLM  EG VKPN+  YN L+ A+ +     EA  + + +  +G++PD+
Sbjct: 200 IYGQVENCKAIFDLMVAEG-VKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDI 258

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           V+Y ++  AY ++ + ++A EV  +M+ N  +PN  +   +I  Y   G +KEA+     
Sbjct: 259 VSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHE 318

Query: 309 MKEYGVHP-----------------------------------NLVIFNLLIKGFVEIMD 333
           M++ G+ P                                   N V +N  IK ++   D
Sbjct: 319 MEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGD 378

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            +   E+   M+E  V PD +TY+ +++  S  G   +    F+DM  + +      YS 
Sbjct: 379 YEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSS 438

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L   Y+++ +  +AE    +M +SG  P+V+ +TT+I  + + G   RA ++F +M  +G
Sbjct: 439 LIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNG 498

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV-HPQKSTFLLLA 500
           + P+     +LM  +++  +P R  ++++ MK   +   QKS F ++A
Sbjct: 499 IPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIA 546



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/460 (26%), Positives = 223/460 (48%), Gaps = 36/460 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +M+S    G+ +  +AIF+ ++  G KP++V Y +LL A   +       +I +
Sbjct: 188 VVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFN 247

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +++NG+ PD + + +++NA+  S   E+A + F KMK++   P   +YN LI  YG AG
Sbjct: 248 LIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAG 307

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+V LL  M ++G ++P++ + + L+ A    + IT    ++    + G+  + V Y
Sbjct: 308 MLKEAVGLLHEMEKDG-IQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAY 366

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N+   +Y   G+ ++A E+   M  + V+P+  T  I+ISG  K GK  E+LRF   M +
Sbjct: 367 NSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVD 426

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             V     +++ LI  +++       +   + MK+    PDV+TY+T++ A++  G   +
Sbjct: 427 SKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKR 486

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN------VVI 425
             ++F +M   GI PDA   S L + + +  EPE+  +L+  M +     N      ++ 
Sbjct: 487 AWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIA 546

Query: 426 FTTIISGW----------------CSDGSMDRAI-------------EVFDKMCEHGVSP 456
             T+I  W                 S G+++  +             ++F KM     + 
Sbjct: 547 SCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTSCSTV 606

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            L T+  ++       +  +  E+LQ M+  GVHP    F
Sbjct: 607 GLSTYAVVLRNLLVVGKWRKYIEVLQWMEDSGVHPTLYMF 646



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/415 (23%), Positives = 213/415 (51%), Gaps = 3/415 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHK--PSLVTYTTLLAALTIQKRFNSIHSIMS 131
           ++  +++ L++ G+  EA  +FN++ E   K  P +VTYT+++ +  I  +  +  +I  
Sbjct: 153 TLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENCKAIFD 212

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ P+ + +N+++ A++  G   EA+  F  +K++GL P   +Y +L+  YG + 
Sbjct: 213 LMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNAYGRSA 272

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +PE++ ++ + M ++ + KPN  +YN L+ A+ +   + EA  ++H+M   G++PDVV+ 
Sbjct: 273 QPEKAREVFNKM-KKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSI 331

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +T+  A  +  +  + E ++      G+  N       I  Y   G  ++AL    +M+E
Sbjct: 332 STLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRE 391

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             V P+ V +N+LI G  ++            M + +V+     YS+++ ++   G + +
Sbjct: 392 SNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQGKLSE 451

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +  F  M K+G  PD   Y+ L + Y      ++A +L   M  +G  P+ +I ++++ 
Sbjct: 452 AESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLME 511

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            +   G  +R +++ + M +  +  N K++  ++   +  R    A E+++ + +
Sbjct: 512 AFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDS 566



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 201/460 (43%), Gaps = 38/460 (8%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A+ +F  + E   KP    Y +L+ A +   ++    +IM  +    + P    +N VI
Sbjct: 29  QARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVI 88

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           NA   +GN ++A++   KM E+G+ P   T+N ++       +  +++   ++M +  NV
Sbjct: 89  NACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIM-KGANV 147

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK--PDVVTYNTIATAYAQNGEADQA 267
             +  T N+++          EA  + + M     K  PDVVTY +I  +Y   G+ +  
Sbjct: 148 TSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENC 207

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
           + +   M   GV+PN      ++  Y   G  +EAL     +K+ G+ P++V +  L+  
Sbjct: 208 KAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNA 267

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           +      +   EV   MK+    P+ ++Y+ +++A+ +AG + +   +  +M K GI+PD
Sbjct: 268 YGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPD 327

Query: 388 AHAYSIL-----------------------------------AKGYVREQEPEKAEELLM 412
             + S L                                    K Y+   + EKA EL  
Sbjct: 328 VVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYT 387

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
           +M ES   P+ V +  +ISG    G    ++  F+ M +  VS   + + +L++ Y +  
Sbjct: 388 SMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEVYSSLIYSYIKQG 447

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           +   AE     MK  G  P   T+  L +A  A G  K A
Sbjct: 448 KLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRA 487



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/387 (24%), Positives = 185/387 (47%), Gaps = 2/387 (0%)

Query: 64  MNKESCRTVR-SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K SC+  + S   L+++    G  +EA  + + + + G +P +V+ +TLLAA    ++
Sbjct: 284 MKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQ 343

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
              I +I+      G+D +++ +N+ I ++   G+ E+A++ +  M+ES + P   TYN 
Sbjct: 344 ITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNI 403

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G    GK  ES++  + M  +  V      Y+ L+ ++  +  ++EA +    M  S
Sbjct: 404 LISGSSKLGKYTESLRFFEDMV-DSKVSSTKEVYSSLIYSYIKQGKLSEAESTFSSMKKS 462

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  PDV+TY T+  AY   G   +A ++  EME NG+ P+   C  ++  + K G+ +  
Sbjct: 463 GCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERV 522

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L+    MK+  +  N   +  +I     I D     E++  +     +  V T + ++N 
Sbjct: 523 LQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNF 582

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G  +   ++F  M  +        Y+++ +  +   +  K  E+L  M +SG HP 
Sbjct: 583 LGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQWMEDSGVHPT 642

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKM 449
           + +F  ++     +  MD A  + +K+
Sbjct: 643 LYMFQNVLPYIWRENGMDFAATMQEKI 669



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 104/470 (22%), Positives = 214/470 (45%), Gaps = 13/470 (2%)

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK 169
           Y  ++       + +    +  +++E    PD+  +N++I+A S +G    A++    M 
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
            + + PT +TYN +I   G AG  +++++L   M+  G V P+L T+N+++ A  N    
Sbjct: 74  RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENG-VGPDLVTHNIVLSALKNGAQY 132

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ--PNGRTCG 287
           ++A +    M  + +  D  T N I     + G+  +A E+   M     +  P+  T  
Sbjct: 133 SKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYT 192

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI-MDRDGVDEVLALMKE 346
            I+  YC  G+++        M   GV PN+V +N L+  +    M R+ +  +  L+K+
Sbjct: 193 SIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREAL-AIFNLIKK 251

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             + PD+++Y++++NA+  +   +K +E+F+ M K   KP+  +Y+ L   Y      ++
Sbjct: 252 NGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKE 311

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  LL  M + G  P+VV  +T+++       + R   + +     G+  N   + + + 
Sbjct: 312 AVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIK 371

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTN 526
            Y       +A E+   M+   V P   T+ +L       G   E+ R    + + + ++
Sbjct: 372 SYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSS 431

Query: 527 EMEAEEDIPVESLE--RLYHKEATTAS------YPNLLQIPNVVSSDQKG 568
             E    +    ++  +L   E+T +S      +P++L    ++ +   G
Sbjct: 432 TKEVYSSLIYSYIKQGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAG 481


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 210/424 (49%), Gaps = 10/424 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++   +K+++ + +        ++F+++   G    L +Y  ++  L    RF    S++
Sbjct: 9   SIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVV 68

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G +PD +  +++IN F +   + +A+D   KM+E G  P    YNT+I G    
Sbjct: 69  GKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKI 128

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   ++V+L D M R+G V+ +  TYN LV   C     ++A  +M  M    + P+V+T
Sbjct: 129 GLVNDAVELFDRMERDG-VRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +  +   + + G+  +A ++  EM    V P+  T   +I+G C  G++ EA +    M 
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
             G  P++V +N LI GF +      VDE   L +E     +  D ITY+TI+  +  AG
Sbjct: 248 TKGCLPDVVTYNTLINGFCK---SKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAG 304

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
             D  +EIF  M     +P+   YSIL  G       EKA  L   M +S    ++  + 
Sbjct: 305 RPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYN 361

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +I G C  G+++ A ++F  +   G+ P++ ++ T++ G+   RQ  +++ + + M+  
Sbjct: 362 IVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQED 421

Query: 488 GVHP 491
           G+ P
Sbjct: 422 GLLP 425



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/399 (23%), Positives = 192/399 (48%), Gaps = 4/399 (1%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           +I+    PS+V ++ +L+ +   K ++ + S+   +E  G+  D   +N VIN       
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
              A+    KM + G  P   T ++LI G+    +  +++ L+  M   G  +P++  YN
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG-FRPDVVIYN 119

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            ++   C    + +A  +  +M   G++ D VTYN++      +G    A  ++ +M   
Sbjct: 120 TIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMR 179

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
            + PN  T   +I  + KEGK  EA++    M    V P++  +N LI G       D  
Sbjct: 180 DIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEA 239

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            ++L LM      PDV+TY+T++N +  +  +D+  ++F +M + G+  D   Y+ + +G
Sbjct: 240 KQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQG 299

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           Y +   P+ A+E+   M      PN+  ++ ++ G C +  +++A+ +F+ M +  +  +
Sbjct: 300 YFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELD 356

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           + T+  ++ G  +      A ++ + +   G+ P   ++
Sbjct: 357 ITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 395



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 75/324 (23%), Positives = 154/324 (47%), Gaps = 38/324 (11%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P++  ++ ++      KN     ++ H M   G+  D+ +YN +     +      A  V
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + +M   G +P+  T   +I+G+C+  ++ +A+     M+E G  P++VI+N +I G  +
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 331 I------------MDRDGV--------------------DEVLALMKEF---RVNPDVIT 355
           I            M+RDGV                     +   LM++     + P+VIT
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           ++ +++ +   G   +  +++++M +  + PD   Y+ L  G       ++A+++L  M+
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G  P+VV + T+I+G+C    +D   ++F +M + G+  +  T+ T++ GY +A +P 
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPD 307

Query: 476 RAEEILQIMKAFGVHPQKSTFLLL 499
            A+EI   M +    P   T+ +L
Sbjct: 308 AAQEIFSRMDS---RPNIRTYSIL 328



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/207 (24%), Positives = 96/207 (46%)

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++V F+ ++    +  + D V  +   M+   +  D+ +Y+ ++N             +
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
              M K G +PD    S L  G+ +      A +L+  M E GF P+VVI+ TII G C 
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G ++ A+E+FD+M   GV  +  T+ +L+ G   + +   A  +++ M    + P   T
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNK 522
           F  + +     G   EA ++  ++  +
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRR 214



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 85/180 (47%)

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M + R  P ++ +S +++  + +   D    +F  M   GI  D ++Y+I+     R   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
              A  ++  M++ G+ P+VV  +++I+G+C    +  AI++  KM E G  P++  + T
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           ++ G  +      A E+   M+  GV     T+  L      +G   +A R++  +  ++
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180


>gi|162460542|ref|NP_001105869.1| pentatricopeptide repeat protein [Zea mays]
 gi|95931777|gb|ABF57644.1| pentatricopeptide repeat protein [Zea mays]
          Length = 886

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 204/396 (51%), Gaps = 7/396 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ S   L+N  ++ GK  +A AI   +   G K +  TY+ L+        F +  SI 
Sbjct: 425 TIISYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIF 484

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + ++G+ PD   +N ++ AF + GNM+ A+  F +M++  + P+  T+  +I+G+ +A
Sbjct: 485 EDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVA 544

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  + +   LDLM R G   P + TYN L+     +  + +A +V+ KM+ +G+ P+  T
Sbjct: 545 GDMKRAFDTLDLMRRSG-CAPTVMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHT 603

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  I   YA +G+  +A E   +++ +G++ +      ++   CK G+++ AL   R M 
Sbjct: 604 YTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMS 663

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              +  N  I+N+LI G+    D     ++L  MKE  + P++ T+++ +NA   AG M 
Sbjct: 664 FQKIPRNTFIYNILIDGWARRGDVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQ 723

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           + + +  +M   G+KP+   ++ L KG+ R   P++A +    M  +G  P+   +  ++
Sbjct: 724 RAENVIQEMADVGLKPNVKTFTTLIKGWARVSLPDRALKCFEEMKSAGLKPDEAAYHCLV 783

Query: 431 SGWCS-----DGSMDRAI-EVFDKMCEHGVSPNLKT 460
           +   S     +GS    I  V  +M E+ ++ +L+T
Sbjct: 784 TSLLSRATVMEGSTYTGIFSVCREMFENDLTVDLRT 819



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/439 (25%), Positives = 206/439 (46%), Gaps = 4/439 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKP---SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDS 142
           GK  +AQ+  N   E   K    + + Y+ ++ A       +    ++ ++EE+G+D   
Sbjct: 332 GKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPI 391

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
             ++++++ ++   + ++ +  F ++KE G  PT  +Y  LI  Y   GK  +++ +   
Sbjct: 392 DVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKAIAISKE 451

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           M   G +K N +TY++L+  + +  +   A+++   M  SG++PD   YN +  A+ + G
Sbjct: 452 MESHG-IKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMG 510

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
             D+A  +   M+   +QP+ RT   II G+   G +K A      M+  G  P ++ +N
Sbjct: 511 NMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPTVMTYN 570

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            LI G V     +    VL  M    + P+  TY+ IM  ++ +G + K  E F  + ++
Sbjct: 571 ALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKES 630

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+K D + Y  L +   +    + A  +   M       N  I+  +I GW   G +  A
Sbjct: 631 GLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEA 690

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            ++  +M E G+ PN+ TF + +    +A    RAE ++Q M   G+ P   TF  L + 
Sbjct: 691 ADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKG 750

Query: 503 RRATGLTKEAKRILSKIKN 521
                L   A +   ++K+
Sbjct: 751 WARVSLPDRALKCFEEMKS 769



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 116/529 (21%), Positives = 228/529 (43%), Gaps = 86/529 (16%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           +++CR  R + +         +P++ QA+ +   E   KPS   +  ++     +   + 
Sbjct: 219 EDACREFRRVLE--------SRPEDWQAVVSAF-ERIPKPSRREFGLMVVYYAKRGDKHH 269

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
             +    +   G++P++  F ++++A++ +G+M  A+    +MK  G+  T  TY+ LI 
Sbjct: 270 ARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALSCVEEMKSEGIEMTVVTYSILIS 329

Query: 186 GYGIAGKPEESVKLLDLMSREGNVK-PNLR--TYNVLVRAWCNEKNITEA---------- 232
           GYG     + +    D + +E   K  NL    Y+ ++ A C   N+  A          
Sbjct: 330 GYGKTNDAQSA----DNLFKEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEED 385

Query: 233 ---------WNVMH----------------KMAASGMKPDVVTYNTIATAYAQNGEADQA 267
                     ++MH                ++   G KP +++Y  +   Y + G+  +A
Sbjct: 386 GIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTIISYGCLINLYVKVGKVPKA 445

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
             +  EME +G++ N +T  ++I+G+        A      M + G+ P+  I+NLL++ 
Sbjct: 446 IAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEA 505

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           F ++ + D    +   M++ R+ P   T+  I+  ++ AG M +  +  D M ++G  P 
Sbjct: 506 FCKMGNMDRAIRIFERMQKERMQPSNRTFRPIIEGFAVAGDMKRAFDTLDLMRRSGCAPT 565

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ L  G VR+ + EKA  +L  M  +G  PN   +T I+ G+ + G + +A E F 
Sbjct: 566 VMTYNALIHGLVRKHQVEKAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFT 625

Query: 448 KMCEHGVSPNLKTFETLMW-----------------------------------GYSEAR 472
           K+ E G+  ++  +ETL+                                    G++   
Sbjct: 626 KIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRG 685

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             W A ++L+ MK  G+ P   TF     A    G  + A+ ++ ++ +
Sbjct: 686 DVWEAADLLKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQEMAD 734



 Score =  115 bits (288), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 128/280 (45%), Gaps = 1/280 (0%)

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           KP    +  +   YA+ G+   A      M   G++PN      ++  Y   G ++ AL 
Sbjct: 248 KPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVAGDMRGALS 307

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               MK  G+   +V +++LI G+ +  D    D +    K    N + I YS I++A  
Sbjct: 308 CVEEMKSEGIEMTVVTYSILISGYGKTNDAQSADNLFKEAKTKLDNLNGIIYSNIIHAHC 367

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
            +G MD+ +E+  +M + GI      Y  +  GY   Q+ +K   +   + E GF P ++
Sbjct: 368 QSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVVQDEKKCLIVFERLKECGFKPTII 427

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +  +I+ +   G + +AI +  +M  HG+  N KT+  L+ G+        A  I + M
Sbjct: 428 SYGCLINLYVKVGKVPKAIAISKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDM 487

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
              G+ P ++ + LL EA    G    A RI  +++ KER
Sbjct: 488 IKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMQ-KER 526


>gi|302780731|ref|XP_002972140.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
 gi|300160439|gb|EFJ27057.1| hypothetical protein SELMODRAFT_450859 [Selaginella moellendorffii]
          Length = 482

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 111/364 (30%), Positives = 186/364 (51%), Gaps = 8/364 (2%)

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           +++ +N +INAF ++  ++EA+  F +MK  G  P+TSTYNTLI G     +  E+ +  
Sbjct: 100 NTVSYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFY 159

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
           + +   G    +  TYN+LV  +C    + EA  +++++ A G       YN I     +
Sbjct: 160 ERLLSSG-AGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFK 218

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
            G+  +AE     ME +GV+P   T  ++I G CK  ++  A     +  E G  P++VI
Sbjct: 219 KGKIHEAELFFNRMEKDGVRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVI 278

Query: 321 FNLLIKGFVEIMDRDGVDE---VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + L+ GF +     GVDE   +  LM      P+ ++ + ++N    A  + + +E+F+
Sbjct: 279 CSCLMDGFCKY---GGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFE 335

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           ++ K   KPD   YS    G  R    ++A ++L  +++ G  P+VV++T +ISG CS G
Sbjct: 336 EVVKRQAKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLG 395

Query: 438 SMDRAIEVFD-KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            +D A +VF+  M   G +PN  T   L+ G+  A +   A E+ Q     GV P   TF
Sbjct: 396 RLDEARKVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTF 455

Query: 497 LLLA 500
             +A
Sbjct: 456 SAMA 459



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 164/357 (45%), Gaps = 2/357 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L+N+  +  +  EA  +F  +   G  PS  TY TL+  L   +R         ++
Sbjct: 103 SYNILINAFCKTKRIDEAIQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERL 162

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +G     I +N +++ F ++  + EA++   ++   G   T++ YN +I      GK 
Sbjct: 163 LSSGAGASFITYNILVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKI 222

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+    + M ++G V+P   T+ VL+   C    +  A  +      SG  P VV  + 
Sbjct: 223 HEAELFFNRMEKDG-VRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSC 281

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + + G  D+A  +   M + G  PN  +C I+I+G CK  ++ +A      + +  
Sbjct: 282 LMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQ 341

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P++V ++  + G       D   +VL ++ +    PDV+ Y+ +++   + G +D+ +
Sbjct: 342 AKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEAR 401

Query: 374 EIFD-DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           ++F+ DM  AG  P+    ++L  G+      ++A EL    +E G  P+   F+ +
Sbjct: 402 KVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAM 458



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 86/384 (22%), Positives = 180/384 (46%), Gaps = 10/384 (2%)

Query: 148 VINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
           ++      G ++EA++ F  +   G        + L++    AG+ EE +K++ LM    
Sbjct: 5   IVLCLCHVGKLDEALELFHSLVSDGCGLPA---DLLVRELSKAGRAEECLKVVKLMLDRQ 61

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
            ++      N+ + + C    I +A +   ++       + V+YN +  A+ +    D+A
Sbjct: 62  QLRER-HLVNITIDSLCKSDMIDKAESWFQELKDFRGLVNTVSYNILINAFCKTKRIDEA 120

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
            ++  EM+  G  P+  T   +I G C+  ++ EA +F   +   G   + + +N+L+ G
Sbjct: 121 IQLFGEMKAPGCAPSTSTYNTLIGGLCRVERLGEAQQFYERLLSSGAGASFITYNILVDG 180

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVIT---YSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           F +    D V E + L+ E      V+T   Y+ I++     G + + +  F+ M K G+
Sbjct: 181 FCKA---DRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDGV 237

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           +P    +++L  G  +     +A+E+  + +ESG  P+VVI + ++ G+C  G +D A  
Sbjct: 238 RPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAWR 297

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           +F+ M   G +PN  +   L+ G  +A++  +A E+ + +      P   T+    +   
Sbjct: 298 IFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDGLC 357

Query: 505 ATGLTKEAKRILSKIKNKERTNEM 528
                 +A+++L  + +K  T ++
Sbjct: 358 RAHRVDQARQVLCMLVDKGGTPDV 381



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 134/285 (47%), Gaps = 2/285 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   +  +  EA  + N L+  G   +   Y  ++  L  + + +      +++E++G
Sbjct: 177 LVDGFCKADRVPEAVELLNELVARGGVVTSAPYNCIIDTLFKKGKIHEAELFFNRMEKDG 236

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P  + F  +I+   ++  +  A + F+   ESG +P+    + L+ G+   G  +E+ 
Sbjct: 237 VRPQEVTFTVLIDGLCKANRVARAKEIFFSYLESGGSPSVVICSCLMDGFCKYGGVDEAW 296

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++ +LM+  G   PN  + N+L+   C  K +++A  V  ++     KPDVVTY+T    
Sbjct: 297 RIFELMTNRG-CTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQAKPDVVTYSTFMDG 355

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR-FARTMKEYGVHP 316
             +    DQA +V+  +   G  P+      +ISG C  G++ EA + F   M+  G  P
Sbjct: 356 LCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEARKVFEVDMRAAGCAP 415

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           N    N+L+ GF      D   E+     E  V PD  T+S + N
Sbjct: 416 NNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMAN 460



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 44/183 (24%), Positives = 81/183 (44%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LM+   + G   EA  IF  +   G  P+ V+   L+  L   KR +    +  +V +  
Sbjct: 282 LMDGFCKYGGVDEAWRIFELMTNRGCTPNDVSCNILINGLCKAKRLSQAREVFEEVVKRQ 341

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + ++  ++    +  +++A      + + G TP    Y  LI G    G+ +E+ 
Sbjct: 342 AKPDVVTYSTFMDGLCRAHRVDQARQVLCMLVDKGGTPDVVMYTALISGLCSLGRLDEAR 401

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+ ++  R     PN  T NVLV  +     + EA  +  +    G++PD  T++ +A  
Sbjct: 402 KVFEVDMRAAGCAPNNFTCNVLVNGFGLAGRLDEARELFQRFVERGVQPDCRTFSAMANN 461

Query: 258 YAQ 260
            A+
Sbjct: 462 TAK 464


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 113/449 (25%), Positives = 211/449 (46%), Gaps = 9/449 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIE--GGHKPS-LVTYTTLLAALTIQKRFNSIHSIM 130
           ++   + +    G P  A   F   +   G  +P+    Y  L+ AL  +    ++  + 
Sbjct: 92  ALVAAVGAFARAGAPDRALKTFYRAVHDLGCARPTEPRLYNHLIDALLRENMVGAVVLVY 151

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + ++G+ P+   +N ++ A  ++  +  A     +M   G  P   TY T++      
Sbjct: 152 DNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKL 211

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + +E+ ++L  M       P   +YN +V A C E  + E ++V+  M   G++P+V+T
Sbjct: 212 DRLDEATEVLAAM------PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVIT 265

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y TI  A+ + GE   A  ++  M   G  PN  T   ++ G   +G++ +AL   R M 
Sbjct: 266 YTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMV 325

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  P+ V +N+LI+G   + D  G   +L  M++    P+V TYST+++ +S AG + 
Sbjct: 326 AEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLG 385

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               I++DM ++G KP+   Y+ +   + ++    +A+ L+  M+     PN V F T+I
Sbjct: 386 GAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLI 445

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C    + RA+ VF +M  HG  PN +T+  L+ G         A  ++  M++ G+ 
Sbjct: 446 RSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIE 505

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
               T+  +      T +++EA   + K+
Sbjct: 506 LSLVTYNTVVSGLCQTRMSREAMVFVGKM 534



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 186/425 (43%), Gaps = 7/425 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +L +  +   A+ + + +   G  P  VTY T+++ L    R +    +++      
Sbjct: 169 LVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLA-----A 223

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M P +  +NA++ A      M+E       M   GL P   TY T++  +  AG+   + 
Sbjct: 224 MPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMAC 283

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L  M   G   PN+ T+  LVR   ++  + +A ++   M A G  P  V+YN +   
Sbjct: 284 AILARMVITG-CTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRG 342

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G+   A  ++  ME +G  PN RT   +I G+ K G +  A+     M   G  PN
Sbjct: 343 LCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPN 402

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V++  ++  F + +  +    ++  M      P+ +T++T++ +      + +   +F 
Sbjct: 403 VVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFH 462

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M + G  P+   Y+ L  G  RE     A  ++  M   G   ++V + T++SG C   
Sbjct: 463 EMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTR 522

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF- 496
               A+    KM   G+ PN  TF  ++  Y +  +   A  +L  M     H     + 
Sbjct: 523 MSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYT 582

Query: 497 LLLAE 501
           +L+AE
Sbjct: 583 ILMAE 587



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 188/394 (47%), Gaps = 1/394 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++ +L    + QE  ++ ++++  G +P+++TYTT++ A           +I++++
Sbjct: 230 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARM 289

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P+ + F A++    + G + +A+D +  M   G  P+T +YN LI+G    G  
Sbjct: 290 VITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDL 349

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + +  +L+ M + G   PN+RTY+ L+  +    ++  A ++ + M+ SG KP+VV Y  
Sbjct: 350 KGASSILNSMEQHG-CFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 408

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + +    +QA+ +I +M      PN  T   +I   C   ++  AL     M+ +G
Sbjct: 409 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 468

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             PN   +N LI G     +      ++  M+   +   ++TY+T+++         +  
Sbjct: 469 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 528

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
                M   GI+P+A  +S +   Y +E E   A  +L  M     H N++++T +++  
Sbjct: 529 VFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAEL 588

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           C+   +  A+    KM   G+ PN  T+  L+ G
Sbjct: 589 CNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRG 622



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/447 (21%), Positives = 195/447 (43%), Gaps = 6/447 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R    L+++L+          +++N+ + G  P++ TY  L+ AL    R  +   ++ +
Sbjct: 129 RLYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDE 188

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +   G  PD + +  +++   +   ++EA +    M      P  ++YN ++       +
Sbjct: 189 MARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMP-----PVAASYNAIVLALCREFR 243

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +E   ++  M   G ++PN+ TY  +V A+C    +  A  ++ +M  +G  P+VVT+ 
Sbjct: 244 MQEVFSVVSDMVGRG-LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFT 302

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +      +G    A ++   M   G  P+  +  I+I G C  G +K A     +M+++
Sbjct: 303 ALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQH 362

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G  PN+  ++ LI GF +  D  G   +   M      P+V+ Y+ +++ +      ++ 
Sbjct: 363 GCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQA 422

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           K + D M      P+   ++ L +     +   +A  +   M   G  PN   +  +I G
Sbjct: 423 KSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHG 482

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
              +G+   A+ +  +M  HG+  +L T+ T++ G  + R    A   +  M   G+ P 
Sbjct: 483 LFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPN 542

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKI 519
             TF  +  A    G  + A  +L  +
Sbjct: 543 AFTFSAIIHAYCKEGEVRMAAWMLGAM 569



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 172/362 (47%), Gaps = 3/362 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T ++++  + G+ + A AI   ++  G  P++VT+T L+  L    R +    +  
Sbjct: 263 VITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWR 322

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  P ++ +N +I      G+++ A      M++ G  P   TY+TLI G+  AG
Sbjct: 323 WMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAG 382

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++ + + MSR G  KPN+  Y  +V  +C +    +A +++ KM      P+ VT+
Sbjct: 383 DLGGAISIWNDMSRSG-CKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTF 441

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+  +        +A  V  EM  +G  PNGRT   +I G  +EG   +AL     M+ 
Sbjct: 442 NTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQS 501

Query: 312 YGVHPNLVIFNLLIKGFVEI-MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           +G+  +LV +N ++ G  +  M R+ +  V  ++ +  + P+  T+S I++A+   G + 
Sbjct: 502 HGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQ-GIQPNAFTFSAIIHAYCKEGEVR 560

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               +   M       +   Y+IL      + +   A   L+ M+  G +PN V +  ++
Sbjct: 561 MAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLV 620

Query: 431 SG 432
            G
Sbjct: 621 RG 622



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 131/265 (49%), Gaps = 2/265 (0%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C   VR+ + L++   + G    A +I+N++   G KP++V YT ++     +  
Sbjct: 359 MEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLM 418

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           FN   S++ ++      P+++ FN +I +  +   +  A+  F +M+  G  P   TYN 
Sbjct: 419 FNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNE 478

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G    G   +++ ++  M   G ++ +L TYN +V   C  +   EA   + KM   
Sbjct: 479 LIHGLFREGNCGDALHMVTEMQSHG-IELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQ 537

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G++P+  T++ I  AY + GE   A  ++  M       N     I+++  C + K+ +A
Sbjct: 538 GIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDA 597

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKG 327
           + +   M   G++PN V +N+L++G
Sbjct: 598 MTYLLKMLYEGIYPNTVTWNVLVRG 622



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 1/204 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L+ SL +  +   A  +F+ +   G  P+  TY  L+  L  +        +++++
Sbjct: 440 TFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEM 499

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + +G++   + +N V++   ++    EAM    KM   G+ P   T++ +I  Y   G+ 
Sbjct: 500 QSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEV 559

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +  +L  M+   N   N+  Y +L+   CN+  + +A   + KM   G+ P+ VT+N 
Sbjct: 560 RMAAWMLGAMNVV-NCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNV 618

Query: 254 IATAYAQNGEADQAEEVIVEMEHN 277
           +     +N    +  + I  +  N
Sbjct: 619 LVRGVFRNLGCIEPSDFIQHITMN 642


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 218/447 (48%), Gaps = 22/447 (4%)

Query: 65  NKESCRTVRSM--------TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAA 116
            +E+CR   ++        T +++ L + G        +  ++    +P+L+TYT L+  
Sbjct: 91  TEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDG 150

Query: 117 LTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPT 176
           L    +      +  ++   G  PD I ++++I+  S++G ++EA      M   G  PT
Sbjct: 151 LCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGPPPT 210

Query: 177 TSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
              Y +++ G    G+ +E+VK +  M R   ++P + TY+ +V  +     + EA+ VM
Sbjct: 211 AVAYTSIVAGLCKCGRIQEAVKTIQEMRRR-RLRPRVDTYSFIVTGYIGMGKVEEAFAVM 269

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
            +MA     PD ++Y     A    G  ++AE+V   M   G +P+  T GIII  +CKE
Sbjct: 270 EEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKE 329

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDV 353
           G +  A    R M +  V PN  I+ +++ GFV+      ++E L L +      + P  
Sbjct: 330 GSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVK---SSRLEEALELYQRILKDGILPST 386

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMG--KAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           +TY+T++NA      MD+  E+  +M   K  ++P    YS++  G  +    E+A +LL
Sbjct: 387 VTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLL 446

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL--MWGYS 469
             MI++G  P+   +T++I      G + RA+E+ ++M + G+ P+  T+ TL  +   S
Sbjct: 447 AEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRS 506

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTF 496
           +    W   ++LQ M   G  P + TF
Sbjct: 507 DVDAAW---DLLQEMMRNGHTPNEFTF 530



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 100/454 (22%), Positives = 224/454 (49%), Gaps = 19/454 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +L+  G+  +A   F + I    +P++ ++  LL     +  F  +++++ +++  G
Sbjct: 3   LLLALVRGGQLSDALGFFQSSIS---EPNVSSFNILLRGFAARDDFEVVNALLREMKARG 59

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTF-------WKMKESGLTPTTSTYNTLIKGYGIA 190
           +  +      +++A     ++++A+  F        ++ E+   P + TY  ++ G   A
Sbjct: 60  ITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKA 119

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +  ++  + M      +P L TY VLV   C    +  A +V  +M   G KPD++ 
Sbjct: 120 GNYDAGLEYYEKMV-ASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIA 178

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+++    ++ G  D+A +++  M   G  P       I++G CK G+I+EA++  + M+
Sbjct: 179 YSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMR 238

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
              + P +  ++ ++ G++ +     V+E  A+M+E       PD I+Y+  + A  + G
Sbjct: 239 RRRLRPRVDTYSFIVTGYIGM---GKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIG 295

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
             ++ +++F+ M + G KPD H Y I+   + +E     A  +L  M ++   PN  I+T
Sbjct: 296 RREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYT 355

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM--K 485
            I+ G+     ++ A+E++ ++ + G+ P+  T+ T++    + ++   A E+L+ M  +
Sbjct: 356 MIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRR 415

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
              + P   T+ ++       G+ + A  +L+++
Sbjct: 416 KEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEM 449



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 113/469 (24%), Positives = 205/469 (43%), Gaps = 45/469 (9%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR-------FN 124
           V S   L+     R   +   A+   +   G   +  T+  +L+AL  ++        FN
Sbjct: 29  VSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAVSYFN 88

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           S      ++ E    PDS+ + A+++   ++GN +  ++ + KM  S   PT  TY  L+
Sbjct: 89  SRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTYTVLV 148

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G   A K E +  + + M R+G+ KP++  Y+ L+        + EA  ++  M A G 
Sbjct: 149 DGLCKAHKVERACDVFEEMIRKGH-KPDIIAYSSLIDGLSKAGRVDEARKLVDLMIARGP 207

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P  V Y +I     + G   +A + I EM    ++P   T   I++GY   GK++EA  
Sbjct: 208 PPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEEAFA 267

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               M +    P+ + + + I+    I  R+  ++V   M E    PD+ TY  I++ + 
Sbjct: 268 VMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFC 327

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG------ 418
             G M     +   M KA +KP+ + Y+++  G+V+    E+A EL   +++ G      
Sbjct: 328 KEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTV 387

Query: 419 -------------------------------FHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
                                            P++V ++ II G    G  +RA ++  
Sbjct: 388 TYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLA 447

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           +M ++GV P+  T+ +L+   + A +  RA E+L+ M   G+ P   T+
Sbjct: 448 EMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTY 496


>gi|357460281|ref|XP_003600422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355489470|gb|AES70673.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 512

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 104/426 (24%), Positives = 208/426 (48%), Gaps = 2/426 (0%)

Query: 95  FNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           FN+L+   +  PS++ +  +L +L     ++ + S+  Q+E NG+  + +  + +IN FS
Sbjct: 56  FNHLLHQKNPTPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFS 115

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           + G+   +   F  + + G  P   T  TLIKG  + G   +++   D +   G  + N 
Sbjct: 116 QLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALG-FQLNQ 174

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            +Y  L+   C       A  ++ ++    ++ DVV YNTI     ++   + A +   E
Sbjct: 175 VSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSE 234

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M    + P   T   +I G C  G++K+A+     M    ++P +  F++L+  F +   
Sbjct: 235 MVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGK 294

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
                 V  +M +  V P+++TY+++MN +     ++K + IF+ M + G+ PD H+YSI
Sbjct: 295 VKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSI 354

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           +  G+ + +  ++A +L   M      P+VV + ++I G C  G +  A+++  +M + G
Sbjct: 355 MISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRG 414

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
             PN+ T+ +L+    +     +A E+L  +K   + P   T+ +L      +G  K+A+
Sbjct: 415 QPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQ 474

Query: 514 RILSKI 519
           ++   +
Sbjct: 475 KVFEDV 480



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 97/364 (26%), Positives = 189/364 (51%), Gaps = 1/364 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++T L+  L  +G   +A    + ++  G + + V+Y TL+  L    +  +   ++ ++
Sbjct: 141 TLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRI 200

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +   +  D + +N +I+   +   + +A D + +M    + PT  TYNTLI G  I G+ 
Sbjct: 201 DGKLVRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQL 260

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           ++++ LL  M  E N+ P + T+++LV A+C E  + EA NV   M    +KP++VTYN+
Sbjct: 261 KDAIGLLHKMILE-NINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNS 319

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y    E ++AE +   M   GV P+  +  I+ISG+CK   + EA++    M    
Sbjct: 320 LMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQ 379

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P++V +N LI G  +        +++  M +    P++ITY+++++A      +DK  
Sbjct: 380 IFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAI 439

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+   +    I+P    Y+IL  G  +    + A+++   ++ +G++ +V  + T+I G+
Sbjct: 440 ELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGF 499

Query: 434 CSDG 437
           C  G
Sbjct: 500 CKKG 503



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 100/407 (24%), Positives = 205/407 (50%), Gaps = 3/407 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI-HSIMSQVEE 135
           K++ SL++        ++   +   G   +LVT + L+   + Q   NS+  S+ S + +
Sbjct: 74  KILGSLVKANHYSIVVSLHRQMEFNGIASNLVTLSILINCFS-QLGHNSLSFSVFSNILK 132

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G +PD+I    +I      G++ +A+    K+   G      +Y TLI G    G+ + 
Sbjct: 133 KGYEPDAITLTTLIKGLCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKA 192

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++++L  +  +  V+ ++  YN ++   C +K + +A++   +M A  + P VVTYNT+ 
Sbjct: 193 ALEMLRRIDGKL-VRLDVVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLI 251

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
                 G+   A  ++ +M    + P   T  I++  +CKEGK+KEA      M +  V 
Sbjct: 252 CGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVK 311

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN+V +N L+ G+  + + +  + +   M +  V PDV +YS +++ +     +D+  ++
Sbjct: 312 PNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKL 371

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F++M    I PD   Y+ L  G  +      A +L+  M + G  PN++ + +++   C 
Sbjct: 372 FEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNIITYNSLLDALCK 431

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           +  +D+AIE+  K+ +H + P++ T+  L+ G  ++ +   A+++ +
Sbjct: 432 NHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFE 478



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 198/402 (49%), Gaps = 11/402 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +++ L+N   + G    + ++F+N+++ G++P  +T TTL+  L ++   +       +V
Sbjct: 106 TLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFHDKV 165

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G   + + +  +IN   + G  + A++   ++    +      YNT+I G     K 
Sbjct: 166 LALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDG---VCKD 222

Query: 194 EESVKLLDLMSR--EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +      D  S      + P + TYN L+   C    + +A  ++HKM    + P V T+
Sbjct: 223 KLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTF 282

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  A+ + G+  +A+ V V M    V+PN  T   +++GYC   ++ +A     TM +
Sbjct: 283 SILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQ 342

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGF 368
            GV P++  ++++I GF +I     VDE + L +E    ++ PDV+TY+++++    +G 
Sbjct: 343 IGVAPDVHSYSIMISGFCKI---KMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGR 399

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +    ++  +M   G  P+   Y+ L     +    +KA ELL  + +    P+V  +  
Sbjct: 400 ISYALKLIGEMHDRGQPPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNI 459

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           +I+G C  G +  A +VF+ +  +G + ++ T+ T++ G+ +
Sbjct: 460 LINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCK 501



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 68/265 (25%), Positives = 137/265 (51%), Gaps = 1/265 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P++VTY TL+  L I  +      ++ ++    ++P    F+ +++AF + G ++EA + 
Sbjct: 242 PTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTFSILVDAFCKEGKVKEAKNV 301

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F  M +  + P   TYN+L+ GY +  +  ++  + + M++ G V P++ +Y++++  +C
Sbjct: 302 FVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQIG-VAPDVHSYSIMISGFC 360

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
             K + EA  +  +M    + PDVVTYN++     ++G    A ++I EM   G  PN  
Sbjct: 361 KIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISYALKLIGEMHDRGQPPNII 420

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T   ++   CK   + +A+     +K++ + P++  +N+LI G  +        +V   +
Sbjct: 421 TYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCTYNILINGLCKSGRLKDAQKVFEDV 480

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFM 369
                N DV TY+T++  +   GF+
Sbjct: 481 LVNGYNIDVYTYNTMIKGFCKKGFV 505



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 122/227 (53%), Gaps = 1/227 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV + + L+++  + GK +EA+ +F  +++   KP++VTY +L+    +    N   SI 
Sbjct: 278 TVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIF 337

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           + + + G+ PD   ++ +I+ F +   ++EAM  F +M    + P   TYN+LI G   +
Sbjct: 338 NTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKS 397

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+   ++KL+  M   G   PN+ TYN L+ A C   ++ +A  ++ K+    ++P V T
Sbjct: 398 GRISYALKLIGEMHDRGQ-PPNIITYNSLLDALCKNHHVDKAIELLTKLKDHNIQPSVCT 456

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           YN +     ++G    A++V  ++  NG   +  T   +I G+CK+G
Sbjct: 457 YNILINGLCKSGRLKDAQKVFEDVLVNGYNIDVYTYNTMIKGFCKKG 503



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/371 (20%), Positives = 172/371 (46%), Gaps = 3/371 (0%)

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP 211
           +S+  N+  + +     K    TP+   +  ++     A      V L   M   G +  
Sbjct: 46  YSQLHNLVSSFNHLLHQKNP--TPSIIQFGKILGSLVKANHYSIVVSLHRQMEFNG-IAS 102

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           NL T ++L+  +    + + +++V   +   G +PD +T  T+       G+  +A    
Sbjct: 103 NLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKGLCLKGDIHKALHFH 162

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            ++   G Q N  +   +I+G CK G+ K AL   R +    V  ++V++N +I G  + 
Sbjct: 163 DKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLDVVMYNTIIDGVCKD 222

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
              +   +  + M   R+ P V+TY+T++      G +     +   M    I P  + +
Sbjct: 223 KLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLHKMILENINPTVYTF 282

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           SIL   + +E + ++A+ + + M++    PN+V + ++++G+C    +++A  +F+ M +
Sbjct: 283 SILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVNEVNKAESIFNTMAQ 342

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            GV+P++ ++  ++ G+ + +    A ++ + M    + P   T+  L +    +G    
Sbjct: 343 IGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQIFPDVVTYNSLIDGLCKSGRISY 402

Query: 512 AKRILSKIKNK 522
           A +++ ++ ++
Sbjct: 403 ALKLIGEMHDR 413



 Score =  112 bits (280), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 75/351 (21%), Positives = 151/351 (43%)

Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA 232
           L    ++Y++      +  +    V   + +  + N  P++  +  ++ +     + +  
Sbjct: 29  LIHCFTSYSSFSNSTTLYSQLHNLVSSFNHLLHQKNPTPSIIQFGKILGSLVKANHYSIV 88

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
            ++  +M  +G+  ++VT + +   ++Q G    +  V   +   G +P+  T   +I G
Sbjct: 89  VSLHRQMEFNGIASNLVTLSILINCFSQLGHNSLSFSVFSNILKKGYEPDAITLTTLIKG 148

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
            C +G I +AL F   +   G   N V +  LI G  ++       E+L  +    V  D
Sbjct: 149 LCLKGDIHKALHFHDKVLALGFQLNQVSYRTLINGLCKVGQTKAALEMLRRIDGKLVRLD 208

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
           V+ Y+TI++       ++   + + +M    I P    Y+ L  G     + + A  LL 
Sbjct: 209 VVMYNTIIDGVCKDKLVNDAFDFYSEMVAKRICPTVVTYNTLICGLCIMGQLKDAIGLLH 268

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            MI    +P V  F+ ++  +C +G +  A  VF  M +  V PN+ T+ +LM GY    
Sbjct: 269 KMILENINPTVYTFSILVDAFCKEGKVKEAKNVFVVMMKKDVKPNIVTYNSLMNGYCLVN 328

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           +  +AE I   M   GV P   ++ ++        +  EA ++  ++  K+
Sbjct: 329 EVNKAESIFNTMAQIGVAPDVHSYSIMISGFCKIKMVDEAMKLFEEMHCKQ 379


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 203/420 (48%), Gaps = 42/420 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ SL + G   +A  +F  +      PSLVTY                           
Sbjct: 16  VVQSLAKAGMLAQALEVFETMKSESCVPSLVTY--------------------------- 48

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMK-ESGLTPTTSTYNTLIKGYGIAGKPEES 196
                   N +IN+   +G   +A+D F  MK E  + P   TYNTLI G   +G  E +
Sbjct: 49  --------NVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGA 100

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            KLL  M R+ N+  N+ TY+ ++++   E    E++ V+ +M A+G  PDV  +N +  
Sbjct: 101 RKLLSEM-RDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQ 159

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR--TMKEYGV 314
            +A++   ++A EV   M  +G +P+  +  I+I G  K GK+ E+L+      M+  G 
Sbjct: 160 GFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGY 219

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            PN++ F+ LI G     + +   EV   M E    P+  TY+T++     A  + + +E
Sbjct: 220 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARE 279

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI-ESGFHPNVVIFTTIISGW 433
           +F+ M +A I PDA AY+ L  GY +    ++AE+L   M   +G  P +V F T+I G+
Sbjct: 280 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 339

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM--KAFGVHP 491
           C  G + RA E+  +M   G++ +  T+  L+ G S A +   A E+ + M  K F + P
Sbjct: 340 CKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 399



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 205/386 (53%), Gaps = 11/386 (2%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           ++ V+ + +++G + +A++ F  MK     P+  TYN LI     AG+  +++ L   M 
Sbjct: 13  YDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMK 72

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           RE  V+P+  TYN L+   C+  N   A  ++ +M    +  +V TY++I  +  +  + 
Sbjct: 73  REKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKP 132

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           +++ +V+ EM   G  P+      ++ G+ +   +++A    + M E G  P+ V +++L
Sbjct: 133 EESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHIL 192

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVN-----PDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           I G  +I     +DE L ++ E  +      P+VIT+ST+++     G ++K  E+F  M
Sbjct: 193 IHGLAKI---GKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSM 249

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            +AG KP+ + Y+ L  G  R ++  +A EL   M ++   P+ V + ++I+G+C  GSM
Sbjct: 250 LEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSM 309

Query: 440 DRAIEVFDKMC-EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-L 497
           D A +++ +M    G+ P + TF TL+ G+ +  +  RA E++  M   G+     T+ +
Sbjct: 310 DEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRI 369

Query: 498 LLAEARRATGLTKEAKRILSKIKNKE 523
           L+A   RAT L  EA  +  +++ K+
Sbjct: 370 LIAGLSRATKL-DEALEVYKQMREKK 394



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 192/417 (46%), Gaps = 37/417 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L   G  + A+ + + + +     ++ TY++++ +L  + +    + ++ ++   G
Sbjct: 87  LISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAG 146

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            +PD   FN V+  F+ S NME+A + +  M ESG  P   +Y+ LI G    GK +ES+
Sbjct: 147 CNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESL 206

Query: 198 KLLDLMS-REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           K+L  M+ R     PN+ T++ L+   C    + +A  V   M  +G KP+  TY T+  
Sbjct: 207 KILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIA 266

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK-EYGVH 315
              +  +  QA E+  +M    + P+      +I+GYCK G + EA +  R M    G+ 
Sbjct: 267 GLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQ 326

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P +V FN LI GF ++      +E++A M    +  D  TY  ++   S A  +D+  E+
Sbjct: 327 PTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEV 386

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           +  M                    RE++               F  + V   + + G C 
Sbjct: 387 YKQM--------------------REKK---------------FLLDPVSCVSFVGGLCK 411

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            G++D+A  VF+   + G  PN +TF  L     +  +   A+++++  KA  +  Q
Sbjct: 412 TGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLMEPAKARDITAQ 468


>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
 gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
          Length = 567

 Score =  182 bits (461), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 203/439 (46%), Gaps = 35/439 (7%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           ++  GHKP +   T LL  L    +      +M    E+G+ PD+  +  ++N   + GN
Sbjct: 88  IVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGN 147

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           +  AM    KM+E+G    T TYN+L++G    G   +S++LLD + R+G V PN  T++
Sbjct: 148 IGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGLV-PNEFTHS 206

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
            L+ A   E+ + EA  ++  + A G KP++V+YN + T   + G  ++A +   ++   
Sbjct: 207 FLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSK 266

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G  PN  +C II+   C EG+ +EA      M      P+LV +N+LI            
Sbjct: 267 GFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHA 326

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA---HAYSIL 394
            +VL  M      P   T++ I++     G  D   +  D M      P+    +A ++L
Sbjct: 327 FQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHCCNPNDGTFNAIAVL 386

Query: 395 AKG-------------------------------YVREQEPEKAEELLMTMIESGFHPNV 423
            +G                                 R+     A +LL  MI+SGF P+ 
Sbjct: 387 CEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDP 446

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
             ++++I G C +G +D A+E+F  + E+   P L  F  L+ G+ ++ +   + EI ++
Sbjct: 447 YTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKSGRTDLSLEIFEM 506

Query: 484 MKAFGVHPQKSTFLLLAEA 502
           M   G  P ++T+ +L E 
Sbjct: 507 MILKGYTPNETTYTILVEG 525



 Score = 79.0 bits (193), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 52/251 (20%), Positives = 118/251 (47%), Gaps = 3/251 (1%)

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           E IV   H   +P+      ++   CK  K+K+A R      E G+ P+   +  L+   
Sbjct: 86  EFIVRKGH---KPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYTFLVNNL 142

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +  +     +++  M+E     + +TY++++      G +++  ++ D + + G+ P+ 
Sbjct: 143 CKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNE 202

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             +S L +   +E+  ++A +LL  +I  G  PN+V +  +++G C +G  + AI+ F  
Sbjct: 203 FTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRD 262

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           +   G +PN+ +   ++       +   A E++  M +    P   T+ +L  +  + G 
Sbjct: 263 LPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGSLASHGR 322

Query: 509 TKEAKRILSKI 519
            + A ++L ++
Sbjct: 323 IQHAFQVLDEM 333


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 116/430 (26%), Positives = 207/430 (48%), Gaps = 36/430 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + L++ L E G+ +EA  + + + E G +PS  TYT L+ AL  +   +   ++  ++
Sbjct: 268 SYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEM 327

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P+   +  +I+     G +EEA     KM +  + P+  TYN LI GY   G+ 
Sbjct: 328 IPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRV 387

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             + +LL +M +    KPN+RT+N L+   C      +A +++ +M  +G+ PD+V+YN 
Sbjct: 388 VPAFELLTVMEKRA-CKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNV 446

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G  + A +++  M    ++P+  T   II+ +CK+GK   A  F   M   G
Sbjct: 447 LIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKG 506

Query: 314 VHPNLVIFNLLIKGFVEI-MDRDG-------------------------------VDEVL 341
           +  + V    LI G  ++   RD                                V E L
Sbjct: 507 ISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEEL 566

Query: 342 ALM---KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           A++    +  + P V+TY+T+++    +G +     I + M  +G  P+ + Y+I+  G 
Sbjct: 567 AMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGL 626

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +    E+AE+LL  M +SG  PN V +T ++ G+ ++G +DRA+E    M E G   N 
Sbjct: 627 CQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELND 686

Query: 459 KTFETLMWGY 468
           + + +L+ G+
Sbjct: 687 RIYSSLLQGF 696



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 120/545 (22%), Positives = 239/545 (43%), Gaps = 91/545 (16%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++ C+ + R+ T L+ +L +RG   +A  +F+ +I  G KP++ TYT L+  L    +
Sbjct: 292 MGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGK 351

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
               + +  ++ ++ + P  I +NA+IN + + G +  A +    M++    P   T+N 
Sbjct: 352 IEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNE 411

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L++G    GKP ++V LL  M   G + P++ +YNVL+   C E ++  A+ ++  M   
Sbjct: 412 LMEGLCRVGKPYKAVHLLKRMLDNG-LSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCF 470

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            ++PD +T+  I  A+ + G+AD A   +  M   G+  +  T   +I G CK GK ++A
Sbjct: 471 DIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDA 530

Query: 303 LRFARTM-----------------------------------KEYGVHPNLVIFNLLIKG 327
           L    T+                                    + G+ P++V +  L+ G
Sbjct: 531 LFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDG 590

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
            +   D  G   +L LMK     P+V  Y+ I+N     G +++ +++   M  +G+ P+
Sbjct: 591 LIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPN 650

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW-------------- 433
              Y+++ KGYV   + ++A E +  M+E G+  N  I+++++ G+              
Sbjct: 651 HVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEEST 710

Query: 434 ---------------------------------------CSDGSMDRAIEVFDKMCEHGV 454
                                                  C +G  D + ++   + E GV
Sbjct: 711 VSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGV 770

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
               K  + +M  Y   ++  +  E++ ++   G  P   +F L+ +  +  G  + A+ 
Sbjct: 771 FLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARE 829

Query: 515 ILSKI 519
           ++ ++
Sbjct: 830 LVMEL 834



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/456 (23%), Positives = 211/456 (46%), Gaps = 37/456 (8%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G    ++ Y T++ AL       +    MS++ + G   DS    +++  F    N+ +A
Sbjct: 190 GFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLNLRDA 249

Query: 162 MDTFWKM-KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           +  F  M KE    P + +Y+ LI G    G+ EE+  L D M  +G  +P+ RTY VL+
Sbjct: 250 LKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKG-CQPSTRTYTVLI 308

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           +A C+   I +A+N+  +M   G KP+V TY  +     ++G+ ++A  V  +M  + + 
Sbjct: 309 KALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+  T   +I+GYCK+G++  A      M++    PN+  FN L++G   +        +
Sbjct: 369 PSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHL 428

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L  M +  ++PD+++Y+ +++     G M+   ++   M    I+PD   ++ +   + +
Sbjct: 429 LKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCK 488

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG----------------------S 438
           + + + A   L  M+  G   + V  TT+I G C  G                      S
Sbjct: 489 QGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHS 548

Query: 439 MDRAIEVFDKMC-------------EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           ++  +++  K C             + G+ P++ T+ TL+ G   +     +  IL++MK
Sbjct: 549 LNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMK 608

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             G  P    + ++       G  +EA+++LS +++
Sbjct: 609 LSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQD 644



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 117/463 (25%), Positives = 207/463 (44%), Gaps = 62/463 (13%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K +C+  VR+  +LM  L   GKP +A  +   +++ G  P +V+Y  L+  L  +  
Sbjct: 397 MEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGH 456

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            N+ + ++S +    ++PD + F A+INAF + G  + A      M   G++    T  T
Sbjct: 457 MNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTT 516

Query: 183 LIKGYGIAGKPEESV-------------------KLLDLMSREGNVK------------- 210
           LI G    GK  +++                    +LD++S+   VK             
Sbjct: 517 LIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLG 576

Query: 211 --PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
             P++ TY  LV       +IT ++ ++  M  SG  P+V  Y  I     Q G  ++AE
Sbjct: 577 LVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAE 636

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           +++  M+ +GV PN  T  +++ GY   GK+  AL   R M E G   N  I++ L++GF
Sbjct: 637 KLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGF 696

Query: 329 VEIMDRDGVD----EVLALMKEFRVNPDVITYST----------------IMNAWSTAGF 368
           V  + + G+D      ++ +     +P+ I                    ++      G 
Sbjct: 697 V--LSQKGIDNSEESTVSDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGR 754

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            D+  ++  ++ + G+  +  A  I+ + Y  +++  K  EL+  +++SGF P+   F  
Sbjct: 755 TDESNDLVQNVLERGVFLE-KAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCL 813

Query: 429 IISGWCSDGSMDRAIE-VFDKMCEHGV---SPNLKTFETLMWG 467
           +I G   +G  +RA E V + +  +GV   S  L   E LM G
Sbjct: 814 VIQGLKKEGDAERARELVMELLTSNGVVEKSGVLTYVECLMEG 856



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 136/310 (43%), Gaps = 42/310 (13%)

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           A+    +M A G    ++ Y TI  A  +NG  + AE  + ++   G   +      ++ 
Sbjct: 179 AYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLL 238

Query: 292 GYCKEGKIKEALRFARTM-KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL---MKEF 347
           G+C+   +++AL+    M KE    PN V +++LI G  E+     ++E   L   M E 
Sbjct: 239 GFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEV---GRLEEAFGLKDQMGEK 295

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
              P   TY+ ++ A    G +DK   +FD+M   G KP+ H Y++L  G  R+ + E+A
Sbjct: 296 GCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEA 355

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMD--------------------------- 440
             +   M++    P+V+ +  +I+G+C DG +                            
Sbjct: 356 NGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEG 415

Query: 441 --------RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
                   +A+ +  +M ++G+SP++ ++  L+ G         A ++L  M  F + P 
Sbjct: 416 LCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPD 475

Query: 493 KSTFLLLAEA 502
             TF  +  A
Sbjct: 476 CLTFTAIINA 485


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 229/488 (46%), Gaps = 9/488 (1%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           NK  C TV  +  L+   ++    +EA  +F+  +      ++ TY +LL+ L  + + +
Sbjct: 412 NKNICPTVFIVNSLIRGFLKVESREEASKLFDEAV-ACDIANIFTYNSLLSWLCKEGKMS 470

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
              ++  ++ + G+ P  + +N++I      GN++ A   F  M + GL P   TY+ L+
Sbjct: 471 EATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILM 530

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            GY   G  E +  + D M  E N+ P+  TYN+ +   C     +EA +++ K    G 
Sbjct: 531 DGYFKNGDTEYAFYVFDRMVDE-NIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGF 589

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P  +TYN+I   + + G    A     EM  +GV PN  T   +I+G+CK      AL+
Sbjct: 590 VPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALK 649

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               M+  G+  ++  +  LI GF +  D +    + + + +  ++P+ + Y+++++ + 
Sbjct: 650 MRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYR 709

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
               M+    +   M   GI  D   Y+ L  G ++E     A +L   M   G  P+++
Sbjct: 710 NLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDII 769

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           I+T +I+G C  G ++ A ++  +M    ++PN+  +  L+ G+ +A     A  +   M
Sbjct: 770 IYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEM 829

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE-----RTNEMEAEEDIPVESL 539
              G+ P  +T+ +L   +   G    A + L  +K K+     R NE ++ + +  +++
Sbjct: 830 LDKGLTPNDTTYDILINGKIKGG--NSALKSLLSLKFKDGKGMKRINEQDSIKKVIEKAV 887

Query: 540 ERLYHKEA 547
            +    EA
Sbjct: 888 NKYLRPEA 895



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 109/474 (22%), Positives = 205/474 (43%), Gaps = 23/474 (4%)

Query: 70  RTVRSMTKLMNSLIERGKP-QEAQAIFNNLIEG--GHKPSLVT----------------- 109
           R++ S+  L++ L    +  ++AQ + N  I G  G  P+++                  
Sbjct: 116 RSLDSLCVLLHILTRSSETLKQAQNLLNRFISGDSGPMPNILVDHFIGSTKRFDFDSDIR 175

Query: 110 -YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
            Y  LL +     + N      +++ E+ + P   F N ++ A  ++  + EA + + KM
Sbjct: 176 IYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEAREVYEKM 235

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
              G+     T + +++   +    EE  K   L ++   VK +   Y+++++A+C   +
Sbjct: 236 VLKGVHGDCFTVHIMMRA-NLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFCKNLD 294

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           +  A  ++  M   G  P   T+ ++  A  + G   +A  +  EM   GVQ N      
Sbjct: 295 VELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATT 354

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           ++ GYCK+ K+  AL F   M E G  PN V + +LI+   +  +     ++   MK   
Sbjct: 355 LVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKN 414

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           + P V   ++++  +      ++  ++FD+     I  +   Y+ L     +E +  +A 
Sbjct: 415 ICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKMSEAT 473

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            L   M++ G  P  V + ++I G C  G++D A  VF  M + G+ PN+ T+  LM GY
Sbjct: 474 TLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGY 533

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            +      A  +   M    + P   T+ +        G T EA+ +L K   K
Sbjct: 534 FKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEK 587


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 218/464 (46%), Gaps = 28/464 (6%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           ++ +++ G   + V  +     L    +F+    I+ ++   G  PD   ++ VI    +
Sbjct: 413 YSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCD 472

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
           +  +E+A   F +MK +G+ P+  TY  LI  +  AG  +++ K  D M  +G   PN+ 
Sbjct: 473 ASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKG-CTPNVV 531

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TY  L+ A+   K +  A  +   M   G KP+VVTY  +   + + G+ ++A ++   M
Sbjct: 532 TYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM 591

Query: 275 ---------------EHNGVQ-PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
                          +HN  + PN  T G ++ G CK  ++KEA     TM  +G  PN 
Sbjct: 592 RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQ 651

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           ++++ +I GF +I       EV   M E   +P++ TYS+ ++       +D   ++   
Sbjct: 652 IVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSK 711

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M +    P+   Y+ +  G  +  + ++A +L++ M E G +PNVV +T +I G+   G 
Sbjct: 712 MLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGK 771

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +++ +E+F  MC  G +PN  T+  L+           A ++L  MK     P+     +
Sbjct: 772 IEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQ-TYWPKH----I 826

Query: 499 LAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
           L+  +   G ++E       I +    +E+   E +PV+SL R+
Sbjct: 827 LSHRKIIEGFSQEF------ITSIGLLDELSENESVPVDSLYRI 864



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 132/552 (23%), Positives = 237/552 (42%), Gaps = 52/552 (9%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           ++++ L E    +EA  I + +      P++VTY  LL+    + +      I+S +   
Sbjct: 284 RMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITE 343

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  P+   FN++I+A+ +S +   A   F KM + G  P    YN  I G   + + + S
Sbjct: 344 GCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFI-GSVCSNEEQPS 402

Query: 197 VKLLDLMSR------EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
             +LDL+ +      +  V  N    +   R  C      +A+ ++ +M   G  PD  T
Sbjct: 403 SDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDST 462

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +        + ++A  +  EM+ NG+ P+  T  I+I  +CK G I++A ++   M 
Sbjct: 463 YSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEML 522

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PN+V +  LI  +++       DE+  +M      P+V+TY+ +++    AG ++
Sbjct: 523 HKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIE 582

Query: 371 KCKEIF---------DDMGKA-------GIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           K  +I+          DM K           P+   Y  L  G  +    ++A ELL TM
Sbjct: 583 KACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTM 642

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           +  G  PN +++  +I G+C  G +  A EVF KM E G SPNL T+ + +    +  + 
Sbjct: 643 LAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRL 702

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI 534
               ++L  M      P    +  + +     G T EA +++ K++ K            
Sbjct: 703 DLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEK------------ 750

Query: 535 PVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFAT 594
                             PN++    ++  D  G +  +++   L RD  S      F T
Sbjct: 751 ---------------GCNPNVVTYTAMI--DGFGKSGKIEQCLELFRDMCSKGCAPNFIT 793

Query: 595 TSMYLSHSCKSG 606
             + ++H C +G
Sbjct: 794 YRVLINHCCSNG 805



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 124/513 (24%), Positives = 220/513 (42%), Gaps = 72/513 (14%)

Query: 75  MTKLMNSLIER----GKPQEAQAIFNNLIEGGHKPSLVTYTTLL----------AALTIQ 120
           + +L+N L+ +    G    A      L + G+KPS  TY  L+           A  ++
Sbjct: 175 LRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVK 234

Query: 121 KRFNSIHSIMSQV-----------------------EENGMDPDSIFFNAVINAFSESGN 157
           +   S   +M +                        E     PD++F+N +++   E+  
Sbjct: 235 REMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASL 294

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
            EEAMD   +M+ S   P   TY  L+ G    G+     ++L +M  EG   PN   +N
Sbjct: 295 FEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEG-CYPNREIFN 353

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA------DQAEEVI 271
            L+ A+C  ++ + A+ +  KM   G +P  + YN    +   N E       D  E+  
Sbjct: 354 SLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAY 413

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            EM   GV  N           C  GK  +A +    M   G  P+   ++ +I GF  +
Sbjct: 414 SEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVI-GF--L 470

Query: 332 MDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            D   V++  +L +E + N   P V TY+ +++++  AG + + ++ FD+M   G  P+ 
Sbjct: 471 CDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNV 530

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y+ L   Y++ ++   A+EL   M+  G  PNVV +T +I G C  G +++A +++ +
Sbjct: 531 VTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYAR 590

Query: 449 M-------------------CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           M                   CE    PN+ T+  L+ G  +A +   A E+L  M A G 
Sbjct: 591 MRGDIESSDMDKYFKLDHNNCE---GPNVITYGALVDGLCKANRVKEAHELLDTMLAHGC 647

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            P +  +  + +     G  ++A+ + +K+  +
Sbjct: 648 EPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSER 680



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/442 (23%), Positives = 204/442 (46%), Gaps = 23/442 (5%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + +K++  L +  K ++A ++F  +   G  PS+ TYT L+ +               ++
Sbjct: 462 TYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEM 521

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P+ + + A+I+A+ ++  M  A + F  M   G  P   TY  LI G+  AG+ 
Sbjct: 522 LHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQI 581

Query: 194 EESVKL------------------LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
           E++ ++                  LD  + EG   PN+ TY  LV   C    + EA  +
Sbjct: 582 EKACQIYARMRGDIESSDMDKYFKLDHNNCEG---PNVITYGALVDGLCKANRVKEAHEL 638

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
           +  M A G +P+ + Y+ +   + + G+   A+EV  +M   G  PN  T    I    K
Sbjct: 639 LDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFK 698

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
           + ++   L+    M E    PN+VI+  ++ G  +I   D   +++  M+E   NP+V+T
Sbjct: 699 DNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVT 758

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+ +++ +  +G +++C E+F DM   G  P+   Y +L          ++A +LL  M 
Sbjct: 759 YTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMK 818

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
           ++ +  +++    II G+  +     +I + D++ E+   P    +  L+  Y +A +  
Sbjct: 819 QTYWPKHILSHRKIIEGFSQE--FITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLE 876

Query: 476 RAEEILQIMKAFGVHPQKSTFL 497
            A ++L+ + +   H   + +L
Sbjct: 877 VALDLLEEISSSPSHAVSNKYL 898



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 123/509 (24%), Positives = 229/509 (44%), Gaps = 42/509 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + T L++S  + G  Q+A+  F+ ++  G  P++VTYT L+ A    K+      + 
Sbjct: 494 SVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELF 553

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEA---------------MDTFWKMKESGLT- 174
             +   G  P+ + + A+I+   ++G +E+A               MD ++K+  +    
Sbjct: 554 EMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEG 613

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P   TY  L+ G   A + +E+ +LLD M   G  +PN   Y+ ++  +C    + +A  
Sbjct: 614 PNVITYGALVDGLCKANRVKEAHELLDTMLAHG-CEPNQIVYDAVIDGFCKIGKLQDAQE 672

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           V  KM+  G  P++ TY++      ++   D   +V+ +M  N   PN      ++ G C
Sbjct: 673 VFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLC 732

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           K GK  EA +    M+E G +PN+V +  +I GF +    +   E+   M      P+ I
Sbjct: 733 KIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFI 792

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           TY  ++N   + G +D+  ++ D+M +        ++  + +G+   QE   +  LL  +
Sbjct: 793 TYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGF--SQEFITSIGLLDEL 850

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC---EHGVSPNLKTFETLMWGYSEA 471
            E+   P   ++  +I  +   G ++ A+++ +++     H VS N   + +L+   S A
Sbjct: 851 SENESVPVDSLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVS-NKYLYASLIENLSHA 909

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI----------KN 521
            +  +A E+   M +  V P+ S  + L +        +EA ++   I          K 
Sbjct: 910 SKVDKALELYASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSICQMDIHWLQEKA 969

Query: 522 KERTNEM---------EAEEDIPVESLER 541
             RT EM         EAE  +  E LER
Sbjct: 970 TGRTEEMVKLVIAAMVEAETGVSEEILER 998



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 94/406 (23%), Positives = 178/406 (43%), Gaps = 9/406 (2%)

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++++ G  P    +NA+I  F  +  ++ A     +M          T +        
Sbjct: 199 LGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCK 258

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            GK  E+    DL+    +  P+   YN +V   C      EA +++H+M +S   P+VV
Sbjct: 259 GGKCREA---FDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVV 315

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  + +   + G+  + + ++  M   G  PN      +I  YCK      A +  + M
Sbjct: 316 TYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKM 375

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDR------DGVDEVLALMKEFRVNPDVITYSTIMNAW 363
            + G  P  +++N+ I       ++      D V++  + M +  V  + +  S      
Sbjct: 376 IKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCL 435

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
             AG  D+  +I  +M   G  PD   YS +        + EKA  L   M  +G  P+V
Sbjct: 436 CGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSV 495

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
             +T +I  +C  G + +A + FD+M   G +PN+ T+  L+  Y +A+Q   A+E+ ++
Sbjct: 496 YTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEM 555

Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEME 529
           M   G  P   T+  L +     G  ++A +I ++++    +++M+
Sbjct: 556 MLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMD 601



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/418 (20%), Positives = 164/418 (39%), Gaps = 45/418 (10%)

Query: 148 VINAFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           V+   +   N E  +  F W  ++ G + T   ++ L+   G     ++ V L  LM  +
Sbjct: 109 VVEVMNNVKNPELCVKFFLWAGRQIGYSHTPQVFDKLLDLLGCNVNADDRVPLKFLMEIK 168

Query: 207 GNVKPNLR-TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            +    LR   N LVR  C       A   + ++   G KP   TYN +   + +  + D
Sbjct: 169 DDDHELLRRLLNFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLD 228

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A  V  EM       +  T        CK GK +EA       +++   P+ V +N ++
Sbjct: 229 TAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEAEDFV--PDTVFYNRMV 286

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G  E    +   ++L  M+     P+V+TY  +++     G + +CK I   M   G  
Sbjct: 287 SGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCY 346

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD--------- 436
           P+   ++ L   Y + ++   A +L   MI+ G  P  +++   I   CS+         
Sbjct: 347 PNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDIL 406

Query: 437 --------------------------------GSMDRAIEVFDKMCEHGVSPNLKTFETL 464
                                           G  D+A ++  +M   G  P+  T+  +
Sbjct: 407 DLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKV 466

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +    +A +  +A  + + MK  G+ P   T+ +L ++    GL ++A++   ++ +K
Sbjct: 467 IGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHK 524


>gi|226507918|ref|NP_001144813.1| uncharacterized protein LOC100277891 [Zea mays]
 gi|195647376|gb|ACG43156.1| hypothetical protein [Zea mays]
          Length = 597

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 216/447 (48%), Gaps = 11/447 (2%)

Query: 58  THCSFCMNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAA 116
           T C + + + S R  +     L+++  ++ +  EA+A +  L+E    P+  TY  LL A
Sbjct: 157 TVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRA 216

Query: 117 LTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPT 176
                + +    ++S+++ NG+ P +  +NA ++   ++   E+A++ + +MK+      
Sbjct: 217 YCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTN 276

Query: 177 TSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
           T TY  +I  YG A +P  S+++   M   G  KPN+ TY  LV A+  E    +A  V 
Sbjct: 277 TZTYXLMINVYGKANQPMSSLRVFREMKSVG-CKPNICTYTALVNAFAREGLCEKAEEVF 335

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
            +M  +G +PDV  YN +  AY++ G    A E+   MEH G +P+  +  I++  + + 
Sbjct: 336 EEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRA 395

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
           G  +EA    + +K+ G+ P +    LL+       +    +EV+A + +  + PD    
Sbjct: 396 GLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFAL 455

Query: 357 STIMNAWSTAGFMDKCKEIFDDM----GKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
           + ++NA+  AG +D  + +F  M    G +   PD   Y++L   Y R    ++ E    
Sbjct: 456 NAMLNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNAYGRAGYLDRMEAAFR 515

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
           ++   G   +VV +T+ I  +       + + VF++M + G  P+  T + L+   S+ R
Sbjct: 516 SLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDER 575

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLL 499
           Q    E++  I+++  +H    T   L
Sbjct: 576 Q---VEQVTAIVRS--MHKDAKTLFAL 597



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 149/342 (43%), Gaps = 7/342 (2%)

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEES-VKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           W ++ S   P    YN LI  YG   +  E+    + L+  E    P   TY +L+RA+C
Sbjct: 161 WVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALL--EARCVPTEDTYALLLRAYC 218

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
               +  A  V+ +M  +G+ P    YN       +   +++A EV   M+    + N  
Sbjct: 219 GSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTZ 278

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T  ++I+ Y K  +   +LR  R MK  G  PN+  +  L+  F      +  +EV   M
Sbjct: 279 TYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEM 338

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
           ++    PDV  Y+ +M A+S AG      EIF  M   G +PD  +Y+IL   + R    
Sbjct: 339 QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLH 398

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           ++AE     + + G  P +     ++S     G++ R  EV  ++ + G+ P+      +
Sbjct: 399 QEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAM 458

Query: 465 MWGYSEARQPWRAEEILQIMK----AFGVHPQKSTFLLLAEA 502
           +  Y  A +    E +   M+    A    P  ST+ +L  A
Sbjct: 459 LNAYGRAGRLDDMERLFAAMERGDGASAGAPDTSTYNVLVNA 500



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/330 (22%), Positives = 154/330 (46%)

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E  + + + + R  + +P++  YN+L+ A+  ++ ++EA      +  +   P   TY  
Sbjct: 153 EPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYAL 212

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  AY  +G+  +AE VI EM+ NG+ P        + G  K    ++A+   + MK+  
Sbjct: 213 LLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKER 272

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              N   + L+I  + +         V   MK     P++ TY+ ++NA++  G  +K +
Sbjct: 273 CRTNTZTYXLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAE 332

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+F++M +AG +PD +AY+ L + Y R   P+ A E+   M   G  P+   +  ++  +
Sbjct: 333 EVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAF 392

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G    A   F ++ + G+ P +K+   L+  ++ +    R EE++  +   G+ P  
Sbjct: 393 GRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDT 452

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNKE 523
                +  A    G   + +R+ + ++  +
Sbjct: 453 FALNAMLNAYGRAGRLDDMERLFAAMERGD 482


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 120/480 (25%), Positives = 216/480 (45%), Gaps = 41/480 (8%)

Query: 60  CSFCMNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAAL 117
           C   M ++ C+  + +   L++ L + G  ++A  +F+ ++  G   P    +T ++  L
Sbjct: 176 CFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTL 235

Query: 118 TIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT 177
              KR      +  Q+E+ G  PD+I +N +I+  +++G+ +EA+     M      PT 
Sbjct: 236 LKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTE 295

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
            TY  L+     AG  E + +L  +M+  G  +PN   Y  L+  +     + EA ++  
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAASG-FRPNSVIYTSLIHGFAKSGRMKEACSLFD 354

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           +M  +G +PDV+T+  +     ++G  +QA +   EM   G +PN  T   II G  K G
Sbjct: 355 EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG 414

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
           ++  A R  + M  +G  P+ V +  L+ GF ++   D   ++L  + +   +P++  YS
Sbjct: 415 RVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYS 474

Query: 358 TIMNAWSTAGFMDK----------------------------CK--------EIFDDMGK 381
           +++N     G ++K                            CK         IF  M  
Sbjct: 475 SLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVS 534

Query: 382 AGIKPDAHAYSILAKGYVREQE--PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            G KPDA  Y+IL  G  R +E   E+A  LL  + + G+ P+ V +T +  G C  G +
Sbjct: 535 EGCKPDATTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEV 594

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           DRA+++ ++    G + ++  +  L  G     Q  RA  + Q M   G  P  + +  +
Sbjct: 595 DRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCI 654



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 180/372 (48%)

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNME 159
           + G +  + TY  L+  L  +K ++  ++I  ++ + G+ P++  FN +I +F+ +   +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           +A+  F  MK     P   T+  L+     AG  E++ ++   M   G V P+   +  +
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           VR     K + EA  V  +M   G  PD + YNT+    A+ G A +A +V+  M     
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            P   T GI+++  CK G ++ A    R M   G  PN VI+  LI GF +         
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +   M E    PDVIT++ +++    +G  ++  + F++M + G KP+   Y+ + +G  
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +      A  ++  MI  G  P+ V +  ++ G+C  G +D A ++ D++ +   SPNL+
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQ 471

Query: 460 TFETLMWGYSEA 471
            + +L+ G  + 
Sbjct: 472 LYSSLVNGLCDG 483



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/517 (23%), Positives = 224/517 (43%), Gaps = 77/517 (14%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L + G  QEA  + +N++     P+ VTY  L+ +L           +   +  +G
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASG 325

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+S+ + ++I+ F++SG M+EA   F +M E+G  P   T+  +I G   +G  E++ 
Sbjct: 326 FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAA 385

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K  + M R G  KPN+ TY  +++       +  A+ +M  M A G  PD VTY  +   
Sbjct: 386 KSFEEMMR-GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPN----------------------------------- 282
           + + G  D+A +++ E++     PN                                   
Sbjct: 445 FCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAETL 504

Query: 283 --GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG------------F 328
             G  C II+ G CK G++ EA R  + M   G  P+   +N+LI G            F
Sbjct: 505 DPGLCCSIIV-GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERAF 563

Query: 329 VEIMDRDGV----------------------DEVLALMKEFRV---NPDVITYSTIMNAW 363
             + D + V                      D  + +++E      N DV+ Y+ +    
Sbjct: 564 ALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTGL 623

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G +D+   +F +M + G  PDA AY  +  G ++ ++ E A +    MI  G  P V
Sbjct: 624 CYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMIGKGQKPTV 683

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHG-VSPNLKTFETLMWGYSEARQPWRAEEILQ 482
             +T ++   C  G++D A   F+ M   G +  ++  ++ L+ G+ +A +   A ++ +
Sbjct: 684 ATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKALKVDAALKLFE 743

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            M + G  P   T   L +    +G T++A+ +L ++
Sbjct: 744 DMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEM 780



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 181/387 (46%), Gaps = 37/387 (9%)

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+ G   D   +N ++N      N  +      +M ++G+ P T ++N LI+ +    + 
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-MKPDVVTYN 252
           +++V   ++M R+   KP+L T+ +LV   C      +A+ V H+M A G + PD   + 
Sbjct: 171 DDAVTCFEIMKRK-RCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHT 229

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +     +     +A EV  +ME  G  P+      +I G  K G  +EAL+        
Sbjct: 230 AMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK-------- 281

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
                 V+ N+L K  V                     P  +TY  ++N+   AG +++ 
Sbjct: 282 ------VLDNMLAKACV---------------------PTEVTYGILVNSLCKAGTLERA 314

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           +E+F  M  +G +P++  Y+ L  G+ +    ++A  L   M+E+G+ P+V+  T +I G
Sbjct: 315 EELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDG 374

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G+ ++A + F++M   G  PN+ T+ T++ G S+  +   A  I++ M A G  P 
Sbjct: 375 LCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPD 434

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKI 519
             T++ L +     G   EA ++L ++
Sbjct: 435 SVTYICLLDGFCKLGRLDEAAQLLDEL 461



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 102/435 (23%), Positives = 183/435 (42%), Gaps = 75/435 (17%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++ L + G  ++A   F  ++ GG KP++VTYTT++  L+   R  +   IM 
Sbjct: 365 VITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMK 424

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY---- 187
            +  +G  PDS+ +  +++ F + G ++EA     ++ +   +P    Y++L+ G     
Sbjct: 425 GMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGG 484

Query: 188 ------------------------------GIA--GKPEESVKLLDLMSREGNVKPNLRT 215
                                         G+   G+ +E+ ++   M  EG  KP+  T
Sbjct: 485 SVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG-CKPDATT 543

Query: 216 YNVLVRAWCN--EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
           YN+L+   C   E  +  A+ ++H +   G  PD VTY  +     + GE D+A +++ E
Sbjct: 544 YNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEE 603

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
               G   +      + +G C +G++  A+   + M   G  P+   +  +I G +++  
Sbjct: 604 ASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKK 663

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK---------------------- 371
            +   +    M      P V TY+ ++ A   AG +D+                      
Sbjct: 664 LEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYD 723

Query: 372 ------CK--------EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
                 CK        ++F+DM   G  P A   + L  G VR  + EKA+ELL  M   
Sbjct: 724 ALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAG 783

Query: 418 GFHPNVVIFTTIISG 432
           G  P+   FT I+ G
Sbjct: 784 GSPPHAATFTAILDG 798



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 8/206 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L   L  +G+   A ++F  ++  G  P    Y  ++  L   K+         
Sbjct: 613 VVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFD 672

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIA 190
           ++   G  P    + A++ A   +GN++EA   F  M   G L  +   Y+ LI G+  A
Sbjct: 673 EMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMIYDALIHGFCKA 732

Query: 191 GKPEESVKLLDLMSREGNVKPNLRT---YNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
            K + ++KL + M   GNV   + +   ++ LVR+   EK    A  ++ +MAA G  P 
Sbjct: 733 LKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEK----AQELLQEMAAGGSPPH 788

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVE 273
             T+  I     ++ E+ +  +++ E
Sbjct: 789 AATFTAILDGLRKSDESGKLLKLVQE 814


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 109/461 (23%), Positives = 223/461 (48%), Gaps = 7/461 (1%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           KE   +V S   +M+   + G    A++ F  +++ G  P   +Y  L+  L I      
Sbjct: 275 KEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGE 334

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              + + +E +G++PD + +N +   F   G +  A +   KM   G  P   TY  LI 
Sbjct: 335 ALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLIC 394

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G+   G  EE++KL   M   G  + ++ +  VL+ + C  + +  A+ +  +M A+G++
Sbjct: 395 GHCQIGNVEEALKLYKEMISHG-FQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLR 453

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PD++TY+T+     + GE  QA  +  +M  N + PN    G I+ G C++GKI +A  +
Sbjct: 454 PDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMY 513

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNA 362
              +    +  +++++N++I G+++   R    E + L K+     ++P ++T++++M  
Sbjct: 514 FDYLITSNLSLDIILYNIMIDGYIK---RGNTREAVKLYKQLGEKGISPTIVTFNSLMYG 570

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +     + + + + D +   G++P+A  Y+ L   Y  E   +   ELL  M      P 
Sbjct: 571 FCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPT 630

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            + +T +I G C    +  + ++ + M   G++P+  ++ T++  + +AR   +A ++  
Sbjct: 631 HITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYD 690

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            M    + P   T+ +L       G  K+A  +L  ++N++
Sbjct: 691 KMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRK 731



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/449 (23%), Positives = 222/449 (49%), Gaps = 2/449 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+    + G  +EA  ++  +I  G + S+++ T LL +L   ++ +    +  ++
Sbjct: 388 TYTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEM 447

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E NG+ PD I ++ +I+   + G +++A+  + KM  + + P +  +  ++ G    GK 
Sbjct: 448 EANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKI 507

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++    D +    N+  ++  YN+++  +    N  EA  +  ++   G+ P +VT+N+
Sbjct: 508 SQARMYFDYLI-TSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNS 566

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   +  N +  QA  ++  ++ +G++PN  T   +++ YC+EG ++  L     MK   
Sbjct: 567 LMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKA 626

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P  + + ++IKG  +        ++L  M    + PD ++Y+TI+ A+  A  M K  
Sbjct: 627 IGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAF 686

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           +++D M    ++P +  Y+IL  G+    + + A+ LL+++     + N   +TTII   
Sbjct: 687 QLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAH 746

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C+ G +D+A+  F +M E G   +++ +  ++    +      A+    +M + GV P +
Sbjct: 747 CAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQ 806

Query: 494 STFLLLAEARRATG-LTKEAKRILSKIKN 521
             F +L  A    G L  E + +   IK+
Sbjct: 807 DLFEVLLNAFHQCGHLNSEFELLAEMIKS 835



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 203/423 (47%), Gaps = 12/423 (2%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           ++N +   G   S  T + ++  L  Q RF          E     P  + FN +++ + 
Sbjct: 233 VYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYC 292

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           + G ++ A   F  M + GL P   +YN LI G  IAG   E++ L + M   G ++P++
Sbjct: 293 KLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHG-LEPDM 351

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            TYN+L + +     I  AWN++ KM   G  P++VTY  +   + Q G  ++A ++  E
Sbjct: 352 VTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKE 411

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M  +G Q +  +  +++   CK  ++  A +    M+  G+ P+L+ ++ LI G  +   
Sbjct: 412 MISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCK--- 468

Query: 334 RDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           +  V + + L ++    R+ P+ + +  I+      G + + +  FD +  + +  D   
Sbjct: 469 QGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIIL 528

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+I+  GY++     +A +L   + E G  P +V F +++ G+C +  + +A  + D + 
Sbjct: 529 YNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIK 588

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
            HG+ PN  T+ TLM  Y E        E+L  MKA  + P   T+ ++ +     GL K
Sbjct: 589 LHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIK-----GLCK 643

Query: 511 EAK 513
           + K
Sbjct: 644 QWK 646



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/417 (22%), Positives = 204/417 (48%), Gaps = 4/417 (0%)

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
           S+ TY +LL  L   +  N +  + ++++ +G        + V++        ++A+  F
Sbjct: 213 SIQTYNSLLYNL---RHSNIMWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFF 269

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
              +     P+  ++NT++  Y   G  + +     +M + G + P+  +YN+L+   C 
Sbjct: 270 QDTEGKEFQPSVVSFNTIMSRYCKLGFVDVAKSFFCMMLKHG-LLPDAYSYNILIHGLCI 328

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
             ++ EA ++ + M   G++PD+VTYN +A  +   G  + A  +I +M   G  PN  T
Sbjct: 329 AGSMGEALDLKNDMENHGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVT 388

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
             ++I G+C+ G ++EAL+  + M  +G   +++   +L+    +    D   ++   M+
Sbjct: 389 YTVLICGHCQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEME 448

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
              + PD+ITYST+++     G + +   +++ M    I P++  +  +  G   + +  
Sbjct: 449 ANGLRPDLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKIS 508

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +A      +I S    +++++  +I G+   G+   A++++ ++ E G+SP + TF +LM
Sbjct: 509 QARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLM 568

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +G+   R+  +A  +L  +K  G+ P   T+  L       G  +    +LS++K K
Sbjct: 569 YGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAK 625



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 85/380 (22%), Positives = 183/380 (48%), Gaps = 1/380 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L++ L ++G+ Q+A  ++  +      P+ + +  +L  L  + + +        +
Sbjct: 458 TYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYL 517

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             + +  D I +N +I+ + + GN  EA+  + ++ E G++PT  T+N+L+ G+ I  K 
Sbjct: 518 ITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKL 577

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ +LLD +   G ++PN  TY  L+  +C E N+     ++ +M A  + P  +TY  
Sbjct: 578 SQARRLLDTIKLHG-LEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTV 636

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     +  +  ++ +++ +M+  G+ P+  +   II  +CK   +++A +    M  + 
Sbjct: 637 VIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHN 696

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P  V +N+LI GF    D    D +L  ++  +VN +   Y+TI+ A    G +DK  
Sbjct: 697 LEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAV 756

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
             F  M + G +     YS +     +     +A+     M+  G  P+  +F  +++ +
Sbjct: 757 VYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAF 816

Query: 434 CSDGSMDRAIEVFDKMCEHG 453
              G ++   E+  +M + G
Sbjct: 817 HQCGHLNSEFELLAEMIKSG 836



 Score =  132 bits (331), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 84/386 (21%), Positives = 182/386 (47%), Gaps = 8/386 (2%)

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           D  ++ ++ +  A+S S  + +A+    KMK+     +  TYN+L+  Y +      S  
Sbjct: 176 DSSNVVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLL--YNL----RHSNI 229

Query: 199 LLDLMS--REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + D+ +  +      +  T +++V   C +    +A            +P VV++NTI +
Sbjct: 230 MWDVYNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMS 289

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y + G  D A+     M  +G+ P+  +  I+I G C  G + EAL     M+ +G+ P
Sbjct: 290 RYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEP 349

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++V +N+L KGF  +   +G   ++  M     NP+++TY+ ++      G +++  +++
Sbjct: 350 DMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLY 409

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M   G +    + ++L     + ++ + A +L   M  +G  P+++ ++T+I G C  
Sbjct: 410 KEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQ 469

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G + +AI +++KMC + + PN      ++ G  E  +  +A      +    +      +
Sbjct: 470 GEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILY 529

Query: 497 LLLAEARRATGLTKEAKRILSKIKNK 522
            ++ +     G T+EA ++  ++  K
Sbjct: 530 NIMIDGYIKRGNTREAVKLYKQLGEK 555



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 85/344 (24%), Positives = 157/344 (45%), Gaps = 5/344 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI--MSQVEE 135
           ++  L E+GK  +A+  F+ LI       ++ Y  ++      KR N+  ++    Q+ E
Sbjct: 497 ILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYI--KRGNTREAVKLYKQLGE 554

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ P  + FN+++  F  +  + +A      +K  GL P   TY TL+  Y   G  + 
Sbjct: 555 KGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQS 614

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
            ++LL  M  +  + P   TY V+++  C +  + E+  ++  M A G+ PD V+YNTI 
Sbjct: 615 LLELLSEMKAKA-IGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTII 673

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            A+ +  +  +A ++  +M  + ++P   T  I+I+G+C  G +K+A     +++   V+
Sbjct: 674 QAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVN 733

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            N   +  +IK      D D        M E      +  YS ++        + + K  
Sbjct: 734 LNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYF 793

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           F  M   G+ PD   + +L   + +        ELL  MI+SG+
Sbjct: 794 FCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSGW 837


>gi|222612845|gb|EEE50977.1| hypothetical protein OsJ_31558 [Oryza sativa Japonica Group]
          Length = 1263

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 122/481 (25%), Positives = 221/481 (45%), Gaps = 37/481 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +VR+ + LM +  +R   +    +   +   G KP++ +YT  +  L   KRF+  + I+
Sbjct: 319 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRIL 378

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++E  G  PD I    +I    ++G + +A D FWKMK+S   P   TY TL+  +G  
Sbjct: 379 AKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFGDN 438

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +  +++ + M  +G    N+  Y  ++ A C    + EA  +  +M   G+ P+  +
Sbjct: 439 GDSQSVMEIWNAMKADG-YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 497

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++ + + +      A E+   M+ +G +PNG T  + I+ Y K G+  +A++    MK
Sbjct: 498 YNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK 557

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P++V  N ++ G  +         V   +K   V+PD ITY+ ++   S A   D
Sbjct: 558 SKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFD 617

Query: 371 KCKEIFDDMGKAGIKPDAHA-----------------------------------YSILA 395
           +  +IF DM +    PD  A                                   Y+ L 
Sbjct: 618 EAVKIFYDMIENNCVPDVLAVNSLIDTLYKAGRGDEAWRIFYQLKEMNLEPTDGTYNTLL 677

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G  RE + ++   LL  M  S + PN++ + TI+   C +G+++ A+++   M   G  
Sbjct: 678 AGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 737

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P+L ++ T+++G  +  +   A  I   MK   + P  +T   +  +    GL KEA  I
Sbjct: 738 PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHI 796

Query: 516 L 516
           +
Sbjct: 797 I 797



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/452 (23%), Positives = 207/452 (45%), Gaps = 8/452 (1%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTT----LLAALTIQKRFN 124
           C   R+   ++++L     P EA   F +      KP +   T     +L  +    R  
Sbjct: 176 CDERRAAEDVIHALRSADGPAEALERFRS---AARKPRVAQTTASCNYMLELMRGHGRVG 232

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
            +  +   ++   +  +   F A+       G +  A      MKE+G+     TYN L+
Sbjct: 233 DMAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLV 292

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
                +G   E++++  +M  +G V P++RTY+VL+ A+   +++     ++ +M A G+
Sbjct: 293 YFLVKSGFDREALEVYRVMMVDG-VVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGV 351

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           KP+V +Y        Q    D+A  ++ +ME+ G +P+  T  ++I   C  G+I +A  
Sbjct: 352 KPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKD 411

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               MK+    P+ V +  L+  F +  D   V E+   MK    N +V+ Y+ +++A  
Sbjct: 412 VFWKMKKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALC 471

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G + +  E+FD+M + GI P+ ++Y+ L  G+++      A EL   M   G  PN  
Sbjct: 472 QVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGY 531

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
                I+ +   G   +AI+ ++ M   G+ P++     +++G +++ +   A+ +   +
Sbjct: 532 THVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHEL 591

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           KA GV P   T+ ++ +         EA +I 
Sbjct: 592 KAMGVSPDTITYTMMIKCCSKASKFDEAVKIF 623



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 203/448 (45%), Gaps = 7/448 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L++ G  +EA  ++  ++  G  PS+ TY+ L+ A   ++   ++  ++ ++E +G
Sbjct: 291 LVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHG 350

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +   I    ++   +EA     KM+  G  P   T+  LI+    AG+  ++ 
Sbjct: 351 VKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAK 410

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCN---EKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            +   M ++ + KP+  TY  L+  + +    +++ E WN M    A G   +VV Y  +
Sbjct: 411 DVFWKM-KKSDQKPDRVTYITLLDKFGDNGDSQSVMEIWNAMK---ADGYNDNVVAYTAV 466

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             A  Q G   +A E+  EM+  G+ P   +   +ISG+ K  +  +AL   + M  +G 
Sbjct: 467 IDALCQVGRVFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGP 526

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            PN     L I  + +  +     +   LMK   + PDV+  + ++   + +G +   K 
Sbjct: 527 KPNGYTHVLFINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKR 586

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +F ++   G+ PD   Y+++ K   +  + ++A ++   MIE+   P+V+   ++I    
Sbjct: 587 VFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENNCVPDVLAVNSLIDTLY 646

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G  D A  +F ++ E  + P   T+ TL+ G     +      +L+ M      P   
Sbjct: 647 KAGRGDEAWRIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLI 706

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
           T+  + +     G   +A  +L  +  K
Sbjct: 707 TYNTILDCLCKNGAVNDALDMLYSMTTK 734



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 211/450 (46%), Gaps = 15/450 (3%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            +++ L + G   +A  +  ++   G  P L +Y T++  L  ++R+N   SI  Q+++  
Sbjct: 711  ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV- 769

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT----STYNTLIKGYGIAGKP 193
            + PD      ++ +F + G M+EA+     +K+  L P +    S+ ++L++G       
Sbjct: 770  LIPDYATLCTILPSFVKIGLMKEALHI---IKDYFLQPGSKTDRSSCHSLMEGILKKAGI 826

Query: 194  EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+S++  ++++  G    +      L++  C +K   EA  ++ K  + G+      YN+
Sbjct: 827  EKSIEFAEIIASSGITLDDF-FLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGLYNS 885

Query: 254  IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
            +          D AE +  EM+  G  P+  T  +++    K  +I+E L+    M   G
Sbjct: 886  LICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKG 945

Query: 314  VHPNLVIFNLLIKGFVEIMDRD-GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
                 V +N +I G V+    +  +D    LM +   +P   TY  +++    AG ++  
Sbjct: 946  YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQ-GFSPTPCTYGPLLDGLLKAGRIEDA 1004

Query: 373  KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            + +F++M + G K +   Y+IL  G+      EK   L   M++ G +P++  +T II  
Sbjct: 1005 ENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDT 1064

Query: 433  WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
             C  G ++  +  F ++ E G+ P+L T+  L+ G  ++++   A  +   M+  G+ P 
Sbjct: 1065 LCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPN 1124

Query: 493  KSTF----LLLAEARRATGLTKEAKRILSK 518
              T+    L L +A +A    K  + +L+K
Sbjct: 1125 LYTYNSLILHLGKAGKAAEAGKMYEELLTK 1154



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 101/410 (24%), Positives = 183/410 (44%), Gaps = 3/410 (0%)

Query: 62   FC-MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNN-LIEGGHKPSLVTYTTLLAALTI 119
            FC M K       ++  ++ S ++ G  +EA  I  +  ++ G K    +  +L+  +  
Sbjct: 763  FCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKDYFLQPGSKTDRSSCHSLMEGILK 822

Query: 120  QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
            +            +  +G+  D  F   +I    +     EA +   K K  G++  T  
Sbjct: 823  KAGIEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGL 882

Query: 180  YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
            YN+LI G       + +  L   M +E    P+  TYN+L+ A      I E   V  +M
Sbjct: 883  YNSLICGLVDENLIDIAEGLFAEM-KELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM 941

Query: 240  AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
               G +   VTYNTI +   ++   +QA ++   +   G  P   T G ++ G  K G+I
Sbjct: 942  HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 1001

Query: 300  KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            ++A      M EYG   N  I+N+L+ G     + + V  +   M +  +NPD+ +Y+ I
Sbjct: 1002 EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 1061

Query: 360  MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
            ++    AG ++     F  + + G++PD   Y++L  G  + +  E+A  L   M + G 
Sbjct: 1062 IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 1121

Query: 420  HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
             PN+  + ++I      G    A ++++++   G  PN+ T+  L+ GYS
Sbjct: 1122 VPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYS 1171



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/379 (25%), Positives = 180/379 (47%), Gaps = 8/379 (2%)

Query: 148 VINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYN---TLIKGYGIAGKPEESVKLLDLM 203
           VI+A   +    EA++ F    ++  +  TT++ N    L++G+G  G   E   + D+M
Sbjct: 185 VIHALRSADGPAEALERFRSAARKPRVAQTTASCNYMLELMRGHGRVGDMAE---VFDVM 241

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            R+  VK N+ T+  +      E  +  A   +  M  +G+  +  TYN +     ++G 
Sbjct: 242 QRQ-IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGF 300

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
             +A EV   M  +GV P+ RT  +++  + K   ++  L   R M+ +GV PN+  + +
Sbjct: 301 DREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTI 360

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
            I+   +    D    +LA M+     PDVIT++ ++     AG +   K++F  M K+ 
Sbjct: 361 CIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSD 420

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
            KPD   Y  L   +    + +   E+   M   G++ NVV +T +I   C  G +  A+
Sbjct: 421 QKPDRVTYITLLDKFGDNGDSQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEAL 480

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           E+FD+M + G+ P   ++ +L+ G+ +A +   A E+ + M   G  P   T +L     
Sbjct: 481 EMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKHMDIHGPKPNGYTHVLFINYY 540

Query: 504 RATGLTKEAKRILSKIKNK 522
             +G + +A +    +K+K
Sbjct: 541 GKSGESIKAIQRYELMKSK 559



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 45/201 (22%), Positives = 89/201 (44%), Gaps = 3/201 (1%)

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           L++G   + D   + EV  +M+   V  +V T++ I       G +         M +AG
Sbjct: 224 LMRGHGRVGD---MAEVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAG 280

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           I  +A+ Y+ L    V+     +A E+   M+  G  P+V  ++ ++  +     ++  +
Sbjct: 281 IVLNAYTYNGLVYFLVKSGFDREALEVYRVMMVDGVVPSVRTYSVLMVAFGKRRDVETVL 340

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
            +  +M  HGV PN+ ++   +    +A++   A  IL  M+  G  P   T  +L +  
Sbjct: 341 WLLREMEAHGVKPNVYSYTICIRVLGQAKRFDEAYRILAKMENEGCKPDVITHTVLIQVL 400

Query: 504 RATGLTKEAKRILSKIKNKER 524
              G   +AK +  K+K  ++
Sbjct: 401 CDAGRISDAKDVFWKMKKSDQ 421


>gi|356561683|ref|XP_003549109.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 445

 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 199/404 (49%), Gaps = 9/404 (2%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A A FN ++     P    +  +L++L   KR+ ++ S+  Q E NG+ PD    + +I
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNGITPDLCTLSILI 103

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N F    ++  A   F  + + G  P   T NTLIKG    G+ + ++   D +  +G  
Sbjct: 104 NCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQG-F 162

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           + +  +Y  L+   C          ++ K+    +KPD+V Y TI     +N     A +
Sbjct: 163 QLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACD 222

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  EM   G+ PN  T   +I G+C  G +KEA      MK   ++P++  FN+LI    
Sbjct: 223 LYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILI---- 278

Query: 330 EIMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           + + ++G +DE ++L +E +   + P+++TY+++++       +++   +   M + GI+
Sbjct: 279 DALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQ 338

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P+ ++Y+IL     +    E A++    ++  G+H NV  +  +I+G C  G     +++
Sbjct: 339 PNVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDL 398

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             KM   G  PN  TF+T++    E  +  +AE+ L+ M A G+
Sbjct: 399 KSKMEGKGCMPNAITFKTIICALLEKDENDKAEKFLREMIARGL 442



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 85/363 (23%), Positives = 172/363 (47%), Gaps = 1/363 (0%)

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           +A+ +F +M      P T  +N ++       +    + L       G + P+L T ++L
Sbjct: 44  DAVASFNRMLLMRPPPPTFLFNNILSSLVKNKRYPTVISLFKQFEPNG-ITPDLCTLSIL 102

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +  +C+  +IT A++V   +   G  P+ +T NT+       GE  +A     ++   G 
Sbjct: 103 INCFCHLTHITFAFSVFANILKRGYHPNAITLNTLIKGLCFCGEIKRALHFHDKVVAQGF 162

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           Q +  + G +I+G CK G+ K   R  R ++ + V P+LV++  +I    +        +
Sbjct: 163 QLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDLVMYTTIIHCLCKNKLLGDACD 222

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           + + M    ++P+V TY+T+++ +   G + +   + ++M    I PD + ++IL     
Sbjct: 223 LYSEMIVKGISPNVFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALA 282

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +E + ++A  L   M      PN+V +T++I G C +  ++RAI +  KM E G+ PN+ 
Sbjct: 283 KEGKIDEAMSLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVY 342

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           ++  L+    +  +   A++  Q +   G H    T+ ++       GL  +   + SK+
Sbjct: 343 SYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKM 402

Query: 520 KNK 522
           + K
Sbjct: 403 EGK 405



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 159/311 (51%), Gaps = 1/311 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+  L   G+ + A    + ++  G +   V+Y TL+  L       ++  ++ ++
Sbjct: 133 TLNTLIKGLCFCGEIKRALHFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKL 192

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E + + PD + +  +I+   ++  + +A D + +M   G++P   TY TLI G+ I G  
Sbjct: 193 EGHSVKPDLVMYTTIIHCLCKNKLLGDACDLYSEMIVKGISPNVFTYTTLIHGFCIMGNL 252

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+  LL+ M  + N+ P++ T+N+L+ A   E  I EA ++  +M    M P++VTY +
Sbjct: 253 KEAFSLLNEMKLK-NINPDVYTFNILIDALAKEGKIDEAMSLFEEMKHKNMFPNIVTYTS 311

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     +N   ++A  +  +M+  G+QPN  +  I++   CK G+++ A +F + +   G
Sbjct: 312 LIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGGRLENAKQFFQHLLVKG 371

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
            H N+  +N++I G  +      V ++ + M+     P+ IT+ TI+ A       DK +
Sbjct: 372 YHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITFKTIICALLEKDENDKAE 431

Query: 374 EIFDDMGKAGI 384
           +   +M   G+
Sbjct: 432 KFLREMIARGL 442



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 101/208 (48%), Gaps = 1/208 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++     G  +EA ++ N +      P + T+  L+ AL  + + +   S+  
Sbjct: 236 VFTYTTLIHGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALAKEGKIDEAMSLFE 295

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++   M P+ + + ++I+   ++ ++E A+    KMKE G+ P   +Y  L+      G
Sbjct: 296 EMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPNVYSYTILLDALCKGG 355

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E + +    +  +G    N+RTYNV++   C      +  ++  KM   G  P+ +T+
Sbjct: 356 RLENAKQFFQHLLVKG-YHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPNAITF 414

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGV 279
            TI  A  +  E D+AE+ + EM   G+
Sbjct: 415 KTIICALLEKDENDKAEKFLREMIARGL 442


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 209/470 (44%), Gaps = 42/470 (8%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+++ C  T  + T L++ L++ G+  EA A+   ++E G+ P+L TYT ++  L+   R
Sbjct: 68  MDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSKAGR 127

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF----WKMKESGLTPTTS 178
                 I   +  NG  PD+  + A+I    +SG  EEA   +     +   +   P   
Sbjct: 128 VEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVPDVV 187

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           TY +LI G   AG+  E+ ++ D  + E    P+  TY  ++   C    + E     H+
Sbjct: 188 TYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHE 247

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M   G +PD VTY  +   + +     +A  V  +M  +G   +  T  II+ G CK G+
Sbjct: 248 MRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGR 307

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           + EA      M+E G    +V ++ L+ GF    +     E+   M +    P++++Y+ 
Sbjct: 308 VAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNI 367

Query: 359 IMNAWSTAGFMDK---------------------------CK---------EIFDDMGKA 382
           I+     AG + K                           C+         E+F+ M   
Sbjct: 368 IIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLHGLCQRLDTVSDGVELFESMVSQ 427

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G  P+ H+YSIL  G  R    E A E+   M+  G  P+VV+F T+I   C  G +D A
Sbjct: 428 GTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRGVAPDVVVFNTLIRWLCIAGRVDEA 487

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +EVF ++ E   +P+  ++ +L+ G S   +   A  +   MK  G  P+
Sbjct: 488 LEVFREL-ERRSAPDAWSYWSLLDGLSRCERMEEARLLSFHMKLQGCAPR 536



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 201/454 (44%), Gaps = 13/454 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            ++ L +  +  +A  +   + E    P+ VTYT L+  L    R +   +++ Q+ E G
Sbjct: 48  FIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKG 107

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P    +  VI+  S++G +EEA   F  M  +G  P    Y  LIKG   +GKPEE+ 
Sbjct: 108 NSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAY 167

Query: 198 KLLDLMSREGNVK-------PNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVV 249
            L     +E N +       P++ TY  L+   C    I EA  V    A   G  PD V
Sbjct: 168 ALY----KEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAV 223

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY +I     + G  ++  E   EM + G +P+  T   +I G+ K   I +A R  R M
Sbjct: 224 TYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM 283

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            + G   + V +N+++ G  +             M+E      V+TYS +M+ + + G +
Sbjct: 284 LQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNV 343

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
               E+F  M   G +P+  +Y+I+ +G  R  +  KA      +++    P+V  F   
Sbjct: 344 SAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAF 403

Query: 430 ISGWCSD-GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           + G C    ++   +E+F+ M   G SPNL ++  LM G   A     A EI + M + G
Sbjct: 404 LHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRG 463

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           V P    F  L       G   EA  +  +++ +
Sbjct: 464 VAPDVVVFNTLIRWLCIAGRVDEALEVFRELERR 497



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 100/387 (25%), Positives = 187/387 (48%), Gaps = 10/387 (2%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P +V +T ++  L  +KR +   S++ +    G +PD + +N  I+   ++  +++A   
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
             KM E    PTT TY  L+ G   AG+ +E++ +L+ M  +GN  P L+TY V++    
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGN-SPTLKTYTVVIDGLS 123

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA----EEVIVEMEHNGVQ 280
               + EA  +   M  +G +PD   Y  +     ++G+ ++A    +E      H    
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 281 PNGRTCGIIISGYCKEGKIKEALR-FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           P+  T   +I G CK G+I EA + F     E G  P+ V +  +I G  ++   +   E
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCE 243

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
               M+     PD +TY+ +++ +  A  + K   ++  M ++G       Y+I+  G  
Sbjct: 244 RFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLC 303

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +     +A    + M E G    VV ++ ++ G+CS+G++  A+E+F +M + G  PNL 
Sbjct: 304 KAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLV 363

Query: 460 TFETLMWGYSEARQPWRA----EEILQ 482
           ++  ++ G   A +  +A    E++LQ
Sbjct: 364 SYNIIIRGLCRAGKLAKAYFYFEKLLQ 390



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 98/364 (26%), Positives = 162/364 (44%), Gaps = 10/364 (2%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD + F  VIN       ++EA     +   +G  P   TYN  I G   A + +++ +L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           L  M  E    P   TY  LV        + EA  V+ +M   G  P + TY  +    +
Sbjct: 65  LKKMD-EKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH---- 315
           + G  ++A  + V+M  NG +P+      +I G CK GK +EA    +       H    
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAV 183

Query: 316 PNLVIFNLLIKGFVE---IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           P++V +  LI G  +   I++   V +  A+ + F   PD +TY++I++     G +++ 
Sbjct: 184 PDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGF--IPDAVTYTSIIDGLCKLGRVEEG 241

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            E F +M   G +PDA  Y+ L  G+++ +   KA  +   M++SG   + V +  I+ G
Sbjct: 242 CERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDG 301

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G +  A   F  M E G    + T+  LM G+        A E+ + M   G  P 
Sbjct: 302 LCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPN 361

Query: 493 KSTF 496
             ++
Sbjct: 362 LVSY 365



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 128/279 (45%), Gaps = 5/279 (1%)

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PD+V +  +     +    D+A  V+      G +P+  T  + I G CK  ++ +A + 
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
            + M E    P  V +  L+ G ++    D    VL  M E   +P + TY+ +++  S 
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH----P 421
           AG +++ + IF DM   G +PDA  Y+ L KG  +  +PE+A  L         H    P
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATAVP 184

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVF-DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           +VV +T++I G C  G +  A +VF D+  E G  P+  T+ +++ G  +  +     E 
Sbjct: 185 DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCER 244

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
              M+  G  P   T+  L +      +  +A R+  ++
Sbjct: 245 FHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQM 283



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 78/163 (47%)

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
           +PD++ ++ ++N       +D+   + +   +AG +PD   Y++   G  + +  + A +
Sbjct: 4   SPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQ 63

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           LL  M E    P  V +T ++ G    G +D A+ V ++M E G SP LKT+  ++ G S
Sbjct: 64  LLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLS 123

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           +A +   A  I   M   G  P    +  L +    +G  +EA
Sbjct: 124 KAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEA 166


>gi|302821741|ref|XP_002992532.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
 gi|300139734|gb|EFJ06470.1| hypothetical protein SELMODRAFT_135367 [Selaginella moellendorffii]
          Length = 759

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 213/454 (46%), Gaps = 44/454 (9%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +++SL   G+   AQ IF+  +  G   ++  Y++L+ A     +      I   ++ 
Sbjct: 124 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV 183

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
               P+ + +NAVI+A S+ G+   A+  F +M E G++P   T+NTLI   G A + EE
Sbjct: 184 V-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQGMSPDRITFNTLISAAGRANRWEE 242

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA-ASGMKPDVVTYNTI 254
             ++   M   G  + ++ TYN L+  +C    +     +M  MA +SG++P V+TY+T+
Sbjct: 243 CDRIFAEMEERGIARDDV-TYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTM 301

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              YA+ G A +A  +  EM +  V+P+G     ++  + + G   EA    R M+E G 
Sbjct: 302 IDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGF 361

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
             ++V +N L+  + +         +L  MK+   +P+++TYS +++A+   GF      
Sbjct: 362 AKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMA 421

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +F D+ KAG++PD   YS L  G  +   P++A  LL  M ++G  PNV+ + +++  + 
Sbjct: 422 LFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAYG 481

Query: 435 SDGSMDR-----------------------------------------AIEVFDKMCEHG 453
               M R                                         A  VF +M ++G
Sbjct: 482 RQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQSLVDPKQKQALVLAAARVFREMAKNG 541

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           V PN+ TF +++   S       A  +L+ M+ F
Sbjct: 542 VKPNVVTFSSILNACSHCASVEDASNLLEAMRVF 575



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/455 (22%), Positives = 213/455 (46%), Gaps = 24/455 (5%)

Query: 111 TTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE 170
           +T++++L    R +    I  +    G   +   ++++I A+  SG + +A++ F  MK 
Sbjct: 124 STIISSLGRLGRSDWAQLIFDRAVGAGFGNNVFVYSSLICAYGRSGKLAKAVEIFEAMKV 183

Query: 171 SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
               P    YN +I      G    ++++   M  +G + P+  T+N L+ A        
Sbjct: 184 V-CKPNLVVYNAVIDACSKGGDYPTALRIFREMLEQG-MSPDRITFNTLISAAGRANRWE 241

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM-EHNGVQPNGRTCGII 289
           E   +  +M   G+  D VTYNT+   Y + G+      ++  M + +G++P+  T   +
Sbjct: 242 ECDRIFAEMEERGIARDDVTYNTLIATYCRGGQMHLGAALMETMAKSSGIEPSVITYSTM 301

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           I GY K G   EA+   + M+   V P+ + +N ++     + + D    +   M+E   
Sbjct: 302 IDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIRRAMEEAGF 361

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
             D++TY+ +++++   G   +   + ++M + G  P+   YS L   Y +      A  
Sbjct: 362 AKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKHGFHRDAMA 421

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L   + ++G  P+VV+++T++ G C +GS D A+ + ++M ++G+ PN+ T+ +L+  Y 
Sbjct: 422 LFQDVKKAGLQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVITYNSLLDAY- 480

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEME 529
                    + L + K F   P+   FLL     R T L K +      +++ +++    
Sbjct: 481 -------GRQCLMVRKTF---PKLRFFLL----PRVTMLLKPS------MQDDQQSLVDP 520

Query: 530 AEEDIPVESLERLYHKEATTASYPNLLQIPNVVSS 564
            ++   V +  R++ + A     PN++   +++++
Sbjct: 521 KQKQALVLAAARVFREMAKNGVKPNVVTFSSILNA 555



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 140/299 (46%), Gaps = 13/299 (4%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + + +++   + G   EA A+F  +     +P  + Y T++        F+  HSI 
Sbjct: 294 SVITYSTMIDGYAKLGLAHEAIALFQEMRNQNVEPDGICYNTMVDIHARLGNFDEAHSIR 353

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +EE G   D + +NA+++++ + G   EAM    +MK+ G +P   TY+ LI  Y   
Sbjct: 354 RAMEEAGFAKDIVTYNALLDSYGKQGKFREAMSLLEEMKQRGASPNILTYSALIDAYCKH 413

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   +++ L   + + G ++P++  Y+ LV   C   +  EA  ++ +MA +G++P+V+T
Sbjct: 414 GFHRDAMALFQDVKKAG-LQPDVVLYSTLVDGCCKNGSPDEALALLEEMADNGIRPNVIT 472

Query: 251 YNTIATAYAQNGEADQAE---------EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
           YN++  AY +     +             +  +    +Q + ++   ++    K+  +  
Sbjct: 473 YNSLLDAYGRQCLMVRKTFPKLRFFLLPRVTMLLKPSMQDDQQS---LVDPKQKQALVLA 529

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           A R  R M + GV PN+V F+ ++         +    +L  M+ F      +T+  +M
Sbjct: 530 AARVFREMAKNGVKPNVVTFSSILNACSHCASVEDASNLLEAMRVFDGRVYGVTHGLLM 588


>gi|115475535|ref|NP_001061364.1| Os08g0248400 [Oryza sativa Japonica Group]
 gi|113623333|dbj|BAF23278.1| Os08g0248400, partial [Oryza sativa Japonica Group]
          Length = 440

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 191/377 (50%), Gaps = 6/377 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLI---EGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           +RS+ + + + + R  P  A + FN +    +G   P+L TY  L+       R +   +
Sbjct: 61  IRSLNRALAA-VARDSPAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFA 119

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD-TFWKMKESGLTPTTSTYNTLIKGY 187
            +  V + G   + I F  ++ +         AM+    +M E G  P   +YN L+KG 
Sbjct: 120 GLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGL 179

Query: 188 GIAGKPEESVKLLDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
               + +E+++LL +M+ +G +  P++ +Y+ ++     E +  +A++  H+M   G+ P
Sbjct: 180 CHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILP 239

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           DVVTYNTI  A  +    D+A +V+  M  NGV P+  T   I+ GYC  G+ KEA+   
Sbjct: 240 DVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGIL 299

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             M   GV P+ V +  L+    +        ++L  M +  + P+VITYST+++ ++T 
Sbjct: 300 EKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATK 359

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G + + +++ D M + GI+PD H +SIL     + Q  + A  +   M +    P+VV +
Sbjct: 360 GALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTY 419

Query: 427 TTIISGWCSDGSMDRAI 443
            T+I G C  G +D A+
Sbjct: 420 GTLIDGLCKSGRVDDAM 436



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 85/341 (24%), Positives = 157/341 (46%), Gaps = 5/341 (1%)

Query: 193 PEESVKLLDLMSR--EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V   + M+R  +G V P L TY +L+   C    +   +  +  +   G + + + 
Sbjct: 76  PAAAVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPII 135

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +  +         A  +++  M   G  P+  +  I++ G C E + +EAL     M
Sbjct: 136 FTPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMM 195

Query: 310 KEYG--VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            + G    P++V ++ +I G  +  D D        M E  + PDV+TY+TI+ A   A 
Sbjct: 196 ADDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQ 255

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            MDK  ++ + M K G+ PD   Y+ +  GY    + ++A  +L  M   G  P+ V +T
Sbjct: 256 AMDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYT 315

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +++   C +G    A ++ D M + G+ PN+ T+ TL+ GY+         ++L +M   
Sbjct: 316 SLMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRN 375

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEM 528
           G+ P +  F +L  A         A  + SK++ +  T ++
Sbjct: 376 GIQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDV 416



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/340 (24%), Positives = 166/340 (48%), Gaps = 4/340 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF-NSIHSI 129
           T+ +   L+      G+     A   N+I+ G++   + +T LL +L  +KR  N+++ +
Sbjct: 97  TLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPIIFTPLLKSLCAEKRTSNAMNIV 156

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG--LTPTTSTYNTLIKGY 187
           + ++ E G  P    +N ++         +EA++    M + G    P   +Y+T+I G 
Sbjct: 157 LRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMADDGGDCPPDVVSYSTIIDGL 216

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G  +++      M   G + P++ TYN +V A C  + + +A +V+++M  +G+ PD
Sbjct: 217 FKEGDSDKAYSTYHEMLERG-ILPDVVTYNTIVAALCKAQAMDKAMDVLNRMVKNGVMPD 275

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
            +TYN+I   Y  +G++ +A  ++ +M  +GV+P+  T   ++   CK G+  EA +   
Sbjct: 276 CITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTSLMDYLCKNGRCIEARKILD 335

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
           +M + G+ PN++ ++ L+ G+        + ++L LM    + PD   +S ++ A +   
Sbjct: 336 SMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNGIQPDRHVFSILICACTKHQ 395

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            +D    +F  M +  + PD   Y  L  G  +    + A
Sbjct: 396 NVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDA 435



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 92/359 (25%), Positives = 171/359 (47%), Gaps = 9/359 (2%)

Query: 161 AMDTFWKMKES---GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG-NVKPNLRTY 216
           A+  F +M  S    +TPT  TY  LI     AG+ +     L  + ++G  V+P +  +
Sbjct: 79  AVSGFNRMARSSDGAVTPTLHTYGILIGCCCRAGRLDLGFAGLGNVIKKGYRVEPII--F 136

Query: 217 NVLVRAWCNEKNITEAWN-VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
             L+++ C EK  + A N V+ +M   G  P V +YN +         + +A E++  M 
Sbjct: 137 TPLLKSLCAEKRTSNAMNIVLRRMTELGCAPHVFSYNILLKGLCHESRSQEALELLHMMA 196

Query: 276 HNG--VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
            +G    P+  +   II G  KEG   +A      M E G+ P++V +N ++    +   
Sbjct: 197 DDGGDCPPDVVSYSTIIDGLFKEGDSDKAYSTYHEMLERGILPDVVTYNTIVAALCKAQA 256

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            D   +VL  M +  V PD ITY++I++ + ++G   +   I + M   G++PDA  Y+ 
Sbjct: 257 MDKAMDVLNRMVKNGVMPDCITYNSIVHGYCSSGQSKEAIGILEKMCSDGVEPDAVTYTS 316

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L     +     +A ++L +MI+ G  PNV+ ++T++ G+ + G++    ++ D M  +G
Sbjct: 317 LMDYLCKNGRCIEARKILDSMIKRGLKPNVITYSTLLHGYATKGALVEMRDLLDLMVRNG 376

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           + P+   F  L+   ++ +    A  +   M+   + P   T+  L +    +G   +A
Sbjct: 377 IQPDRHVFSILICACTKHQNVDVAMFVFSKMRQQRLTPDVVTYGTLIDGLCKSGRVDDA 435


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 109/457 (23%), Positives = 212/457 (46%), Gaps = 1/457 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL    +   + ++A A+F  ++     PS+V +T LL A    +R+ ++     ++E  
Sbjct: 41  KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G+  D   F  +I+ F     +  A+    KM + G  P+  T+ +L+ G+ +  +  ++
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
             L+ LM + G  +PN+  YN L+   C    +  A  ++++M   G+  DVVTYNT+ T
Sbjct: 161 FSLVILMVKSG-YEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLT 219

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
               +G    A  ++ +M    + P+  T   +I  + K+G + EA    + M +  V P
Sbjct: 220 GLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDP 279

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N V +N +I G           +   LM      P+V+TY+T+++ +     +D+  ++F
Sbjct: 280 NNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLF 339

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             M   G   D   Y+ L  GY +  +   A ++   M+     P+++    ++ G C +
Sbjct: 340 QRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVN 399

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G ++ A+  FD M E      +  +  ++ G  +A +  +A E+   +   GV P   T+
Sbjct: 400 GEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTY 459

Query: 497 LLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEED 533
            ++       G  +EA  ++ ++K +    +M AE+D
Sbjct: 460 TIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDD 496



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 193/382 (50%), Gaps = 3/382 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T L++      +   A ++   +++ G++PS+VT+ +LL    +  R     S++  +
Sbjct: 108 SFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAFSLVILM 167

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            ++G +P+ + +N +I+   ++G +  A++   +M++ GL     TYNTL+ G   +G+ 
Sbjct: 168 VKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGLCYSGRW 227

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            ++ ++L D+M R  ++ P++ T+  L+  +  + N+ EA  +  +M  S + P+ VTYN
Sbjct: 228 SDAARMLRDMMKR--SINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYN 285

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           +I      +G    A++    M   G  PN  T   +ISG+CK   + E ++  + M   
Sbjct: 286 SIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCE 345

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G + ++  +N LI G+ ++       ++   M   RV PD+IT+  +++     G ++  
Sbjct: 346 GFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESA 405

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
              FDDM ++       AY+I+  G  +  + EKA EL   +   G  P+   +T +I G
Sbjct: 406 LVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILG 465

Query: 433 WCSDGSMDRAIEVFDKMCEHGV 454
            C +G    A E+  +M E G+
Sbjct: 466 LCKNGPRREADELIRRMKEEGI 487



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 113/243 (46%), Gaps = 1/243 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++  +++G   EAQ ++  +I+    P+ VTY +++  L +  R         
Sbjct: 246 VVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTFD 305

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  P+ + +N +I+ F +   ++E M  F +M   G      TYNTLI GY   G
Sbjct: 306 LMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQVG 365

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K   ++ +   M     V P++ T+ +L+   C    I  A      M  S     +V Y
Sbjct: 366 KLRVALDIFCWMVSR-RVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     +  + ++A E+   +   GV+P+ RT  I+I G CK G  +EA    R MKE
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484

Query: 312 YGV 314
            G+
Sbjct: 485 EGI 487


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  181 bits (460), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 217/468 (46%), Gaps = 28/468 (5%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A+  ++ +++ G   + V  +     L    +F+    I+ ++   G  PD   ++ VI 
Sbjct: 402 AEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIG 461

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
              ++  +E+A   F +MK++G+ P+  TY  LI  +  AG  +++    D M R+ N  
Sbjct: 462 FLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRD-NCT 520

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           PN+ TY  L+ A+   + + +A  +   M   G KP+VVTY  +   + + G+ D+A ++
Sbjct: 521 PNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQI 580

Query: 271 IVEM----------------EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
              M                +++   PN  T G ++ G CK  +++EA     TM   G 
Sbjct: 581 YARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGC 640

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            PN ++++ LI GF +    +   EV   M E    P++ TYS+++N+      +D   +
Sbjct: 641 EPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLK 700

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +   M +    P+   Y+ +  G  +  + E+A  L++ M E G +PNV+ +T +I G+ 
Sbjct: 701 VLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFG 760

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G +++ +E++  MC  G +PN  T+  L+           A  +L  MK        S
Sbjct: 761 KIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHIS 820

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
           ++  + E     G  +E       I +    +E+   E +PVESL R+
Sbjct: 821 SYRKIIE-----GFNREF------ITSIGLLDELSENESVPVESLYRI 857



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 132/552 (23%), Positives = 237/552 (42%), Gaps = 52/552 (9%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           ++++ L E    QEA  I + +      P++VTY  LL+    + +      I+S +   
Sbjct: 277 RMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTE 336

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  P+   FN++++A+ +S +   A   F KM + G  P    YN  I G   + +    
Sbjct: 337 GCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFI-GSICSNEELPG 395

Query: 197 VKLLDL----MSREGNVKPNLRTYNV--LVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
             LL+L     S   ++   L   NV    R  C      +A+ ++ +M + G  PD  T
Sbjct: 396 SDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDST 455

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ +        + ++A  +  EM+ NG+ P+  T  I+I  +CK G I++A  +   M 
Sbjct: 456 YSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEML 515

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                PN+V +  LI  +++       +++  +M      P+V+TY+ +++    AG +D
Sbjct: 516 RDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQID 575

Query: 371 KCKEIF----DDMGKAGIK------------PDAHAYSILAKGYVREQEPEKAEELLMTM 414
           K  +I+     D+  + I             P+   Y  L  G  +    E+A ELL TM
Sbjct: 576 KACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTM 635

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
             +G  PN +++  +I G+C  G ++ A EVF KM E G  PNL T+ +L+    + ++ 
Sbjct: 636 SVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRL 695

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI 534
               ++L  M      P    +  + +     G T+EA R++ K++              
Sbjct: 696 DLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEE------------- 742

Query: 535 PVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWFAT 594
                            YPN++    ++  D  G    +++   L RD  S      F T
Sbjct: 743 --------------VGCYPNVITYTAMI--DGFGKIGKIEQCLELYRDMCSKGCAPNFIT 786

Query: 595 TSMYLSHSCKSG 606
             + ++H C +G
Sbjct: 787 YRVLINHCCSTG 798



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 190/421 (45%), Gaps = 35/421 (8%)

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           +S +E+    PD++F+N +++   E+   +EAMD   +M+     P   TY  L+ G   
Sbjct: 260 LSLLEKEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLG 319

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+     ++L +M  EG   PN   +N LV A+C  ++ + A+ +  KM   G +P  +
Sbjct: 320 KGQLGRCKRILSMMMTEG-CYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYL 378

Query: 250 TYNTIATAYAQNGE------ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
            YN    +   N E       + AE+   EM   GV  N           C  GK  +A 
Sbjct: 379 LYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAF 438

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIM 360
                M   G  P+   ++ +I GF  + D   V++   L +E + N   P V TY+ ++
Sbjct: 439 EIICEMMSKGFVPDDSTYSKVI-GF--LCDASKVEKAFLLFEEMKKNGIVPSVYTYTILI 495

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           +++  AG + + +  FD+M +    P+   Y+ L   Y++ ++   A +L   M+  G  
Sbjct: 496 DSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSK 555

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKM-------------------CEHGVSPNLKTF 461
           PNVV +T +I G C  G +D+A +++ +M                   CE   +PN+ T+
Sbjct: 556 PNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCE---TPNIITY 612

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             L+ G  +A +   A E+L  M   G  P +  +  L +    TG  + A+ +  K+  
Sbjct: 613 GALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSE 672

Query: 522 K 522
           +
Sbjct: 673 R 673



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/470 (24%), Positives = 220/470 (46%), Gaps = 27/470 (5%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + T L++S  + G  Q+A+  F+ ++     P++VTYT+L+ A    ++    + + 
Sbjct: 487 SVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLF 546

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEA---------------MDTFWKMKESGL-T 174
             +   G  P+ + + A+I+   ++G +++A               +D ++K+ ++   T
Sbjct: 547 EMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCET 606

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P   TY  L+ G   A + EE+ +LLD MS  G  +PN   Y+ L+  +C    +  A  
Sbjct: 607 PNIITYGALVDGLCKANRVEEAHELLDTMSVNG-CEPNQIVYDALIDGFCKTGKLENAQE 665

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           V  KM+  G  P++ TY+++  +  +    D   +V+ +M  N   PN      +I G C
Sbjct: 666 VFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLC 725

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           K GK +EA R    M+E G +PN++ +  +I GF +I   +   E+   M      P+ I
Sbjct: 726 KVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFI 785

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           TY  ++N   + G +D+   + D+M +        +Y  + +G+ RE        LL  +
Sbjct: 786 TYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIG--LLDEL 843

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT-----FETLMWGYS 469
            E+   P   ++  +I  +   G ++ A+ + +   E   SP+L       + +L+   S
Sbjct: 844 SENESVPVESLYRILIDNFIKAGRLEGALNLLE---EISSSPSLAVANKYLYTSLIESLS 900

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            A +  +A E+   M    V P+ STF+ L +     G  +EA ++   I
Sbjct: 901 HASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSI 950



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/391 (21%), Positives = 154/391 (39%), Gaps = 45/391 (11%)

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR-TYNVLVRAW 223
            W  ++ G + T   YN LI+         + V    LM    + +  LR   N L++  
Sbjct: 121 LWASRQIGYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKC 180

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C       A   + ++   G K    TYN +   + +  + D A  V  EM ++G + +G
Sbjct: 181 CRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDG 240

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T G      CK G+  +AL      KE  V P+ V +N ++ G  E        ++L  
Sbjct: 241 CTLGCFAYSLCKAGRCGDALSLLE--KEEFV-PDTVFYNRMVSGLCEASLFQEAMDILDR 297

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M+     P+V+TY  +++     G + +CK I   M   G  P+   ++ L   Y + ++
Sbjct: 298 MRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRD 357

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSD--------------------------- 436
              A +L   MI+ G  P  +++   I   CS+                           
Sbjct: 358 YSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLN 417

Query: 437 --------------GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
                         G  D+A E+  +M   G  P+  T+  ++    +A +  +A  + +
Sbjct: 418 KVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFE 477

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            MK  G+ P   T+ +L ++    GL ++A+
Sbjct: 478 EMKKNGIVPSVYTYTILIDSFCKAGLIQQAR 508



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 59/284 (20%), Positives = 119/284 (41%), Gaps = 40/284 (14%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C  + + + L+NSL +  +      + + ++E    P++V YT ++  L    +    + 
Sbjct: 676 CPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYR 735

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +M ++EE G  P+ I + A+I+ F + G +E+ ++ +  M   G  P   TY  LI    
Sbjct: 736 LMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCC 795

Query: 189 IAGKPEESVKLLDLMSR--------------------------------EGNVKPNLRTY 216
             G  +E+ +LLD M +                                E    P    Y
Sbjct: 796 STGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFITSIGLLDELSENESVPVESLY 855

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT-----YNTIATAYAQNGEADQAEEVI 271
            +L+  +     +  A N++ ++++S   P +       Y ++  + +   + D+A E+ 
Sbjct: 856 RILIDNFIKAGRLEGALNLLEEISSS---PSLAVANKYLYTSLIESLSHASKVDKAFELY 912

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             M +  V P   T   +I G  + GK +EAL+ + ++ +   H
Sbjct: 913 ASMINKNVVPELSTFVHLIKGLTRVGKWQEALQLSDSICQMVCH 956


>gi|356529499|ref|XP_003533328.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 205/408 (50%), Gaps = 11/408 (2%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A + FN ++   H P ++ +  +L +    K ++++ S+  ++E  G+ PD    N +I
Sbjct: 42  DAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTV-SLSHRLELKGIQPDLFTLNILI 100

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N F   G +        K+ + G  P+T T NTLIKG  + G+ ++++   D +  +G  
Sbjct: 101 NCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQG-F 159

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           + N   Y  L+   C   +   A  ++ K+     KPDVV Y+TI  A  +     +A  
Sbjct: 160 QLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLVSEAYG 219

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI---- 325
           +  EM   G+  +  T   +I G+C  GK+KEA+     M    ++P++  + +L+    
Sbjct: 220 LFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTILVDALC 279

Query: 326 -KGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
            +G V+   R  +  V  L+ E R      DVITYS++++     G +D+   +F+ M  
Sbjct: 280 KEGKVKEAKRR-ISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKD 338

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            GI+P+   ++IL  G  +    + A+E+   ++  G+H NV  +  +I+G C  G ++ 
Sbjct: 339 QGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEE 398

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           A+ +  KM ++G  PN  TFET++    +  +  +AE++L+ M A G+
Sbjct: 399 ALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 446



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 186/375 (49%), Gaps = 15/375 (4%)

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
           N+++A+  F +M     TP    +N ++  +    K   +V L   +  +G ++P+L T 
Sbjct: 39  NVDDAVSQFNRMLCMRHTPPIIQFNKILDSFA-KMKHYSTVSLSHRLELKG-IQPDLFTL 96

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N+L+  +C+   IT  ++V+ K+   G  P  VT NT+       G+  +A     ++  
Sbjct: 97  NILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLA 156

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G Q N    G +I+G CK G  + A++  + +      P++V+++ +I    +      
Sbjct: 157 QGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCK---YQL 213

Query: 337 VDEVLALMKEFRV---NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
           V E   L  E  V   + DV+TY+T++  +   G + +   + + M    I PD + Y+I
Sbjct: 214 VSEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLKTINPDVYTYTI 273

Query: 394 LAKGYVREQEPEKAE-------ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           L     +E + ++A+       +L+  M + G   +V+ ++++I G C +G +DRAI +F
Sbjct: 274 LVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALF 333

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           +KM + G+ PN+ TF  L+ G  +  +   A+E+ Q +   G H    T+ ++       
Sbjct: 334 NKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQ 393

Query: 507 GLTKEAKRILSKIKN 521
           GL +EA  +LSK+++
Sbjct: 394 GLLEEALTMLSKMED 408



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/356 (23%), Positives = 168/356 (47%), Gaps = 49/356 (13%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF-NSIH----- 127
           ++  L+N     G+     ++   +++ G+ PS VT  TL+  L ++ +   ++H     
Sbjct: 95  TLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKL 154

Query: 128 -----------------------------SIMSQVEENGMDPDSIFFNAVINAFSESGNM 158
                                         ++ +++     PD + ++ +I+A  +   +
Sbjct: 155 LAQGFQLNQVGYGTLINGVCKIGDTRAAIKLLKKIDGRLTKPDVVMYSTIIDALCKYQLV 214

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
            EA   F +M   G++    TYNTLI G+ I GK +E++ LL++M  +  + P++ TY +
Sbjct: 215 SEAYGLFSEMTVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNVMVLK-TINPDVYTYTI 273

Query: 219 LVRAWCNEKNITEA-------WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           LV A C E  + EA       W+++ +M   G   DV+TY+++     +NG  D+A  + 
Sbjct: 274 LVDALCKEGKVKEAKRRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALF 333

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            +M+  G++PN  T  I++ G  K G++K+A    + +   G H N+  +N++I G  + 
Sbjct: 334 NKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCK- 392

Query: 332 MDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
             +  ++E L ++ +   N   P+  T+ TI+ A       DK +++   M   G+
Sbjct: 393 --QGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 446



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 36/136 (26%), Positives = 65/136 (47%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L + G    A A+FN + + G +P++ T+T LL  L    R      +  
Sbjct: 310 VITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNMFTFTILLDGLWKGGRLKDAQEVFQ 369

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G   +   +N +IN   + G +EEA+    KM+++G  P   T+ T+I       
Sbjct: 370 DLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKD 429

Query: 192 KPEESVKLLDLMSREG 207
           + +++ KLL  M   G
Sbjct: 430 ENDKAEKLLRQMIARG 445


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 215/450 (47%), Gaps = 17/450 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH----KPSLVTYTTLLAALTIQKRFNSIH 127
           VRS   L+++ +   +  +A A F +L  G       P+L TY  +L +L  +   +   
Sbjct: 119 VRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNIILRSLCARGDVDRAV 178

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
           S+ S +   G+ PD + ++ +++  ++   ++ A+D   +M   G+      YN L+ G 
Sbjct: 179 SLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGVQADAVCYNALLSGC 238

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              G  E+++K+ + + R+    PNL TY V++   C      EA  V  +M A+  + D
Sbjct: 239 FRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMANNHQAD 298

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
            VTY  +     ++G+ D A  V  +M   G+  +      +I G+C+ G+  EA +F  
Sbjct: 299 TVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWKFWD 358

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR----VNPDVITYSTIMNAW 363
           +    G+   +  +N++ KG   ++D   V E   L+K+       +PD +T+ T+++  
Sbjct: 359 STGFSGIR-QITTYNIMTKG---LLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGL 414

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G+ ++  EI +D   +G + D  +YS +   + ++     A E+   M++ G  PN 
Sbjct: 415 CENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNS 474

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
            ++  +I+G+C    ++ AI+++ +M  +G  P + T+ TL+ G  +A +   A  + + 
Sbjct: 475 HVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKE 534

Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           M   G  P   T+     A    GL ++ K
Sbjct: 535 MLERGFKPDIRTY-----ASLIRGLCRDKK 559



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/421 (25%), Positives = 210/421 (49%), Gaps = 4/421 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           L++     G  ++A  ++  L+ + G  P+L TY  +L  L    RF     + S++  N
Sbjct: 234 LLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAGEVWSRMMAN 293

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
               D++ +  +I+    SG+++ A   +  M ++GL    S YN+LIKG+   G+  E+
Sbjct: 294 NHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEA 353

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA-ASGMKPDVVTYNTIA 255
            K  D     G  +  + TYN++ +   +   ++EA  ++ ++   +   PD VT+ T+ 
Sbjct: 354 WKFWDSTGFSGIRQ--ITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLI 411

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               +NG A++A E++ +  ++G + +  +   +I+ +CK+G+  +A    + M + G  
Sbjct: 412 HGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCK 471

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN  ++N LI GF  +   +   ++   M      P +ITY+T+++    A    +   +
Sbjct: 472 PNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSL 531

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
             +M + G KPD   Y+ L +G  R+++ + A  +   ++++G   +V++   +I G CS
Sbjct: 532 TKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCS 591

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G +D A  ++ +M E   SPNL T+ TLM G+ E     +A  +   +   G+ P   T
Sbjct: 592 AGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVT 651

Query: 496 F 496
           +
Sbjct: 652 Y 652



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 200/425 (47%), Gaps = 1/425 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L + G+ +EA  +++ ++   H+   VTY  L+  L      +S   + S + + G
Sbjct: 270 MLDGLCKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAG 329

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   +N++I  F E G   EA   FW           +TYN + KG   +G   E+ 
Sbjct: 330 LVLDVSVYNSLIKGFCEVGRTGEAW-KFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEAT 388

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL  +  + +  P+  T+  L+   C       A+ ++     SG + DV +Y+++   
Sbjct: 389 ELLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINR 448

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + ++G    A EV   M  +G +PN      +I+G+C+  KI +A++    M   G  P 
Sbjct: 449 FCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPT 508

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ +N LI G  +         +   M E    PD+ TY++++        +D    I+D
Sbjct: 509 IITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWD 568

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           ++  AG++ D   ++IL  G     + ++A  + + M E    PN+V + T++ G+   G
Sbjct: 569 EILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIG 628

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
           S+D+A  ++  + ++G+ P++ T+ T + G     +      +L  + A G+ P   T+ 
Sbjct: 629 SIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWS 688

Query: 498 LLAEA 502
           +L  A
Sbjct: 689 ILVRA 693



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 59/259 (22%), Positives = 126/259 (48%), Gaps = 1/259 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + ++N   + G+  +A  ++ N+++ G KP+   Y  L+       + N    I  
Sbjct: 439 VFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYI 498

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  NG  P  I +N +I+   ++   +EA     +M E G  P   TY +LI+G     
Sbjct: 499 EMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDK 558

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K + ++++ D +   G ++ ++  +N+L+   C+   + EA+ +  +M      P++VTY
Sbjct: 559 KVDVALRIWDEILDAG-LQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTY 617

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   + + G  D+A  +   +  NG++P+  T    I G C   +  E +     +  
Sbjct: 618 NTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLA 677

Query: 312 YGVHPNLVIFNLLIKGFVE 330
            G+ P ++ +++L++  ++
Sbjct: 678 TGIMPTVITWSILVRAVIK 696



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 127/278 (45%), Gaps = 24/278 (8%)

Query: 8   KAFLQTDDKYQSGSTIVKKGWGQMIP--AKKNNPGEKKQLYSNSKPTDSQPQTHC----- 60
           +AF   +D   SG  +    +  MI    K     +  ++Y N      +P +H      
Sbjct: 422 RAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNSHVYNALI 481

Query: 61  -SFC---------------MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHK 104
             FC                +   C T+ +   L++ L +  K QEA ++   ++E G K
Sbjct: 482 NGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKEMLERGFK 541

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P + TY +L+  L   K+ +    I  ++ + G+  D +  N +I+    +G ++EA   
Sbjct: 542 PDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGKVDEAFCI 601

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           + +MKE   +P   TYNTL+ G+   G  +++  L   +   G +KP++ TYN  ++  C
Sbjct: 602 YLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNG-LKPDIVTYNTRIKGLC 660

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           +     E   +++++ A+G+ P V+T++ +  A  + G
Sbjct: 661 SCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 77/167 (46%), Gaps = 5/167 (2%)

Query: 358 TIMNAWSTAGFMDKCKEIFDDM-GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
            +++A+S A   D     F D+    G  P   +++ L   +VR +    A+    ++  
Sbjct: 88  VVLSAFSRALMPDAALAAFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSH 147

Query: 417 SGF----HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
             F     PN+  +  I+   C+ G +DRA+ +F  +   GV+P+  T+ TLM G ++  
Sbjct: 148 GAFGRRIAPNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHD 207

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           Q   A ++L  M  +GV      +  L      TG+ ++A ++  ++
Sbjct: 208 QLDNALDLLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQL 254


>gi|225429339|ref|XP_002269471.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02860
           [Vitis vinifera]
          Length = 811

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/447 (25%), Positives = 219/447 (48%), Gaps = 20/447 (4%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G+   A ++ +NL + G    +  YT+++ A T   R+     +  ++EE G  P  I +
Sbjct: 179 GRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITY 238

Query: 146 NAVINAFSESG----NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           N ++N + + G     M   +D   +MK +G+ P + TYNTLI         EE+  +L 
Sbjct: 239 NVILNVYGKMGMPWNKMVGLVD---RMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLK 295

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M   G   P+  TYN L+  +   +   EA  V+ +M  +G  P +VTYN++ +AYA++
Sbjct: 296 EMKLAG-FSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVTYNSLISAYARD 354

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           G  + A E+  +M   G++P+  T   ++SG+ K GK K A++    M+  G  PN+  F
Sbjct: 355 GLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTF 414

Query: 322 NLLIK------GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           N LIK       F E+M      +V   +K F+ +PD++T++T+++ +   G   +   +
Sbjct: 415 NALIKMHGNRGKFTEMM------KVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGV 468

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F +M +AG  P+   ++ L   Y R    ++A  +   M+E+G +P++  +  +++    
Sbjct: 469 FKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALAR 528

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G   ++ +V  +M +    PN  T+ +L+  Y+  ++  R   + + + +  + P+   
Sbjct: 529 GGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVL 588

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNK 522
              L        L  E +R   +++ +
Sbjct: 589 LKTLVLVNSKCDLLMETERAFLELRQR 615



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/439 (25%), Positives = 198/439 (45%), Gaps = 27/439 (6%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   L+++    G  ++A  + N ++E G KP + TYTTLL+      +  +   I 
Sbjct: 340 SIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIF 399

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G  P+   FNA+I      G   E M  F  +K    +P   T+NTL+  +G  
Sbjct: 400 EEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQN 459

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E   +   M R G V P   T+N L+ ++    +  +A  V  +M  +G+ PD+ +
Sbjct: 460 GMDSEVSGVFKEMKRAGFV-PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSS 518

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +  A A+ G   Q+E+V+ EM+    +PN  T   ++  Y    +I+     A  + 
Sbjct: 519 YNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIY 578

Query: 311 EYGVHPNLVIFNLLI-------------KGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
              + P  V+   L+             + F+E+  R               +PD+ T +
Sbjct: 579 SGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRG-------------FSPDITTLN 625

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++ +     + K  EI D M + G  P    Y+ L   Y R    E++EE+L  ++  
Sbjct: 626 AMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAK 685

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  P+++ + T+I  +C +G M  A  V  +M E G +P++ T+ T +  Y+       A
Sbjct: 686 GIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEA 745

Query: 478 EEILQIMKAFGVHPQKSTF 496
            +++  M   G  P +ST+
Sbjct: 746 IDVVCYMIKHGCKPNQSTY 764



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/466 (24%), Positives = 227/466 (48%), Gaps = 47/466 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           V + T ++ +    G+ +EA  +F  + E G KP+L+TY  +L     +   +N +  ++
Sbjct: 200 VYAYTSMITAFTSNGRYREAVMVFKKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLV 259

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +++  G+ PDS  +N +I+        EEA     +MK +G +P   TYN L+  YG +
Sbjct: 260 DRMKSAGIAPDSYTYNTLISCCRRGNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKS 319

Query: 191 GKPEESVKLLDLMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            + +E++++L  M  EGN   P++ TYN L+ A+  +  + +A  + ++M   G+KPDV 
Sbjct: 320 RRSKEAMEVLQEM--EGNGCPPSIVTYNSLISAYARDGLLEDALELKNQMVEKGIKPDVF 377

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY T+ + + + G+   A ++  EM + G +PN  T   +I  +   GK  E ++    +
Sbjct: 378 TYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDI 437

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEFR---VNPDVITYSTIMNAWST 365
           K +   P++V +N L+  F     ++G+D EV  + KE +     P+  T++T+++++S 
Sbjct: 438 KTFQCSPDIVTWNTLLSVF----GQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSR 493

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G  D+   ++  M +AG+ PD  +Y+ +     R    +++E++L  M +    PN + 
Sbjct: 494 CGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELT 553

Query: 426 FTTIISGWCSDGSMDR----AIEVFDKMCE------------------------------ 451
           + +++  + +   ++R    A E++  + E                              
Sbjct: 554 YCSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELR 613

Query: 452 -HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             G SP++ T   ++  Y   +   +A EIL  MK  G  P  +T+
Sbjct: 614 QRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTY 659



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 178/380 (46%), Gaps = 2/380 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  E C+  + +   L+     RGK  E   +F ++      P +VT+ TLL+       
Sbjct: 402 MRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGM 461

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            + +  +  +++  G  P+   FN +I+++S  G+ ++AM  + +M E+G+ P  S+YN 
Sbjct: 462 DSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNA 521

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           ++      G  ++S K+L  M ++G  KPN  TY  L+ A+ N K I     +  ++ + 
Sbjct: 522 VLAALARGGLWKQSEKVLAEM-KDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSG 580

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            ++P  V   T+    ++     + E   +E+   G  P+  T   ++S Y +   + +A
Sbjct: 581 IIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKA 640

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 MK  G  P+L  +N L+  +    + +  +E+L  +    + PD+I+Y+T++ A
Sbjct: 641 NEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYA 700

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +   G M     +  +M ++G  PD   Y+     Y  +    +A +++  MI+ G  PN
Sbjct: 701 YCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPN 760

Query: 423 VVIFTTIISGWCSDGSMDRA 442
              + +I+  +C     D A
Sbjct: 761 QSTYNSIVDWYCKLNRRDEA 780



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/275 (25%), Positives = 121/275 (44%), Gaps = 36/275 (13%)

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           NG    +IIS   K G++  A      + + G   ++  +  +I  F           V 
Sbjct: 164 NGSIIAVIISILGKGGRVSAAASLLHNLCKDGFDVDVYAYTSMITAFTSNGRYREAVMVF 223

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGF-MDKCKEIFDDMGKAGIKPDAHAYSIL------ 394
             M+E    P +ITY+ I+N +   G   +K   + D M  AGI PD++ Y+ L      
Sbjct: 224 KKMEEVGCKPTLITYNVILNVYGKMGMPWNKMVGLVDRMKSAGIAPDSYTYNTLISCCRR 283

Query: 395 ------AKGYVREQE-----PEK------------------AEELLMTMIESGFHPNVVI 425
                 A G ++E +     P+K                  A E+L  M  +G  P++V 
Sbjct: 284 GNLYEEAAGVLKEMKLAGFSPDKVTYNALLDVYGKSRRSKEAMEVLQEMEGNGCPPSIVT 343

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           + ++IS +  DG ++ A+E+ ++M E G+ P++ T+ TL+ G+ +A +   A +I + M+
Sbjct: 344 YNSLISAYARDGLLEDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMR 403

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
             G  P   TF  L +     G   E  ++   IK
Sbjct: 404 NEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIK 438


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 108/484 (22%), Positives = 217/484 (44%), Gaps = 36/484 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++ L +      A+ +F ++I+ G +P+  TYT L+       ++  +  ++ 
Sbjct: 202 VVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQ 261

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G+ PD + +  +++   ++G   EA + F  +   G+ P  + Y  L+ GY   G
Sbjct: 262 EMSTHGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEG 321

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E    LDLM R G V P+   +N++  A+  +  I EA ++  KM    + P VV Y
Sbjct: 322 ALSEMHSFLDLMVRNG-VSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNY 380

Query: 252 NTIATAYAQNGEAD-----------------------------------QAEEVIVEMEH 276
             +  A  + G  D                                   +AE++  E+  
Sbjct: 381 GALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLD 440

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G++ N     I++   C+EG++ EA R    M    V P+++ +N L+ G       D 
Sbjct: 441 QGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDE 500

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             ++L +M    + PD  TY+T+++ +  A  +D    +F +M   G+ P    Y+ +  
Sbjct: 501 AAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILH 560

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  +     +A+EL + MI +    ++  +T I++G C +  +D A ++F  +C   +  
Sbjct: 561 GLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQL 620

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           ++ T   ++    +  +   A ++   + A+G+ P   T+ L+AE     G  +E   + 
Sbjct: 621 DIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELF 680

Query: 517 SKIK 520
           S ++
Sbjct: 681 SAME 684



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 193/422 (45%), Gaps = 34/422 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L + G+  EA+ IF++LI  G KP +  Y  LL     +   + +HS +  +  NG
Sbjct: 278 LLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNG 337

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   FN + NA+++   ++EAM  F KM++  L+P    Y  LI      G+ +++V
Sbjct: 338 VSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAV 397

Query: 198 KLLDLMSREG----------------------------------NVKPNLRTYNVLVRAW 223
              + M  EG                                   ++ N   +N+L+   
Sbjct: 398 LKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNL 457

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C E  + EA  ++  M    ++PDV++YNT+   +   G  D+A +++  M   G++P+ 
Sbjct: 458 CREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDE 517

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T   ++ GYCK  +I +A    R M   G+ P +V +N ++ G  +I       E+   
Sbjct: 518 FTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLN 577

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M   R   D+ TY+ I+N      F+D+  ++F  +    ++ D    +I+    ++   
Sbjct: 578 MINNRRKCDIYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKGGR 637

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            E A +L  T+   G  P+V  +  I      +GS++   E+F  M E+G +PN +    
Sbjct: 638 KEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNA 697

Query: 464 LM 465
           L+
Sbjct: 698 LV 699



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/472 (23%), Positives = 215/472 (45%), Gaps = 47/472 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQ----AIFNNLIEGGH---KPSLVTYTTLLAALTIQKRF 123
           +VR+  +L+ +++ R +   A     ++FN +I        PS  TYT L+       R 
Sbjct: 50  SVRTFNRLL-TVVSRARCSSASELVVSLFNRMIRECSVKVAPSSCTYTILIGCFCRMGRL 108

Query: 124 NSIHSIMSQVEENGMD-PDSIFFNAVINAFSESGNMEEAMDTFWK-MKESGLTPTTSTYN 181
               +    + + G    +++ F  ++    ++  ++EA D   + M E G T    +YN
Sbjct: 109 KHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILLRRMPEFGCTLNVISYN 168

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVK--PNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
            L+KG     + EE+++L+ +M+ +G+    PN+ TY  ++   C  + +  A  V   M
Sbjct: 169 ILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHM 228

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
              G++P+  TY  +   Y   G+  +  +++ EM  +G+QP+     +++   CK G+ 
Sbjct: 229 IDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGRC 288

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKG------------FVEIMDRDGV---------- 337
            EA     ++   G+ P++ I+ +L+ G            F+++M R+GV          
Sbjct: 289 TEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIM 348

Query: 338 ----------DEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
                     DE + +  + R   ++P V+ Y  +++A    G +D     F+ M   G+
Sbjct: 349 FNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGV 408

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            PD   +S L  G     + EKAE+L   +++ G   N   F  ++   C +G +  A  
Sbjct: 409 TPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQR 468

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           + D M    V P++ ++ TL+ G+    +   A ++L +M + G+ P + T+
Sbjct: 469 LIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTY 520



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/342 (23%), Positives = 153/342 (44%), Gaps = 16/342 (4%)

Query: 194 EESVKLLDLM---SREGNVKPNLRTYNVLVRAWCNEKN--ITEAWNVMHKMAASGMKPDV 248
           ++++KL D M   +R  +V+   R   V+ RA C+  +  +   +N M +  +  + P  
Sbjct: 33  DDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPSS 92

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC-GIIISGYCKEGKIKEALR-FA 306
            TY  +   + + G           +   G   N     G ++ G C   ++ EA     
Sbjct: 93  CTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILL 152

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN------PDVITYSTIM 360
           R M E+G   N++ +N+L+KG   + +    +E L LM     +      P+V+TY+T++
Sbjct: 153 RRMPEFGCTLNVISYNILLKG---LCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVI 209

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           +    A  +D+ K +F  M   G++P+ H Y+ L  GY+   + ++  ++L  M   G  
Sbjct: 210 DGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQ 269

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P+ VI+  ++   C +G    A  +FD +   G+ P++  +  L+ GY+           
Sbjct: 270 PDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSF 329

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           L +M   GV P    F ++  A     +  EA  I  K++ +
Sbjct: 330 LDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQ 371



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/372 (22%), Positives = 160/372 (43%), Gaps = 10/372 (2%)

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYN---TLIKGYGIAGKPEESVKLLDLMSREG 207
           A S S  +++A+  F +M       +  T+N   T++     +   E  V L + M RE 
Sbjct: 25  ARSGSLGLDDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIREC 84

Query: 208 NVK--PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK-PDVVTYNTIATAYAQNGEA 264
           +VK  P+  TY +L+  +C    +   +     +  +G    + V +  +          
Sbjct: 85  SVKVAPSSCTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRV 144

Query: 265 DQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG--VH-PNLVI 320
           D+A ++++  M   G   N  +  I++ G C E + +EAL     M + G   H PN+V 
Sbjct: 145 DEATDILLRRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVT 204

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           +  +I G  +    D    V   M +  V P+  TY+ +++ + + G   +  ++  +M 
Sbjct: 205 YTTVIDGLCKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMS 264

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             G++PD   Y++L     +     +A  +  ++I  G  P+V I+  ++ G+ ++G++ 
Sbjct: 265 THGLQPDCVIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALS 324

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
                 D M  +GVSP+   F  +   Y++      A  I   M+   + P    +  L 
Sbjct: 325 EMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALI 384

Query: 501 EARRATGLTKEA 512
           +A    G   +A
Sbjct: 385 DALCKLGRVDDA 396



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 53/231 (22%), Positives = 104/231 (45%), Gaps = 1/231 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L++     G+  EA  + + ++  G KP   TY TLL      +R +  +S+  
Sbjct: 482 VISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFR 541

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ P  + +N +++   + G   EA + +  M  +       TY  ++ G     
Sbjct: 542 EMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCDIYTYTIILNGLCRNN 601

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+ K+   +  + +++ ++ T N+++ A        +A ++   ++A G+ PDV TY
Sbjct: 602 FVDEAFKMFQSLCSK-DLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETY 660

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
             IA    + G  ++ +E+   ME NG  PN R    ++      G I  A
Sbjct: 661 RLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRA 711


>gi|242044666|ref|XP_002460204.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
 gi|241923581|gb|EER96725.1| hypothetical protein SORBIDRAFT_02g024500 [Sorghum bicolor]
          Length = 637

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 214/463 (46%), Gaps = 26/463 (5%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L++  + + A  +F+ ++  G  PS+VTY TL+ A   Q        +  Q+    
Sbjct: 149 VLDGLVKARRSRCAWELFDEMLRRGMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQ 208

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +DP+ I + ++I    E G + +A   F  MKE+G+ P   TYN L+ G+        + 
Sbjct: 209 IDPNVITYTSMICVLCEEGCIGDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAF 268

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   +   G + PN   +  L+  +C  K  +EA ++   M   G+ P V  YN++   
Sbjct: 269 VLYQELLNSGLI-PNAVVFTTLIDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDG 327

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             ++G+A +A  +  EM   G+ P+  TC I++ G C  G+I+ A RF   ++E GV+ N
Sbjct: 328 AFRSGDAQEALSLYQEMTRLGLCPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLN 387

Query: 318 LVIFNLLIKGFVEIMDRDG-VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              +N LI  +     R+G ++E LA    M E  V P+V++YS++++  S  G M    
Sbjct: 388 AAAYNALIDEYC----RNGNLEEALATCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAM 443

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            I+ +M   GI+P+   Y+ L  G+ +    + A      MIE+G  PN +  + ++ G 
Sbjct: 444 AIYTEMVAKGIEPNVVTYTALIHGHAKNGGIDAAFRFHKEMIENGISPNAITVSVLVDGL 503

Query: 434 CSDGSMDRAIE---------------VFDKMC--EHGVSPNLKTFETLMWGYSEARQPWR 476
           C +  +  A+                 F      E  + PN   + TL++G     Q + 
Sbjct: 504 CRENRVQDAVRFVMEHSGIKYSDIHSFFSNFTTEEEPLIPNSAIYMTLIYGLYLDGQHYE 563

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           A ++   M+  G+     T+ LL   +   G    A  + + +
Sbjct: 564 AGKLFSYMRKSGMISDSFTYTLLIRGQCMLGYVLNAMMLYADM 606



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 191/440 (43%), Gaps = 18/440 (4%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   L+N+   +G   +AQ +++ ++     P+++TYT+++  L  +        + 
Sbjct: 177 SVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDAERLF 236

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++E GM P+   +N +++   +  ++  A   + ++  SGL P    + TLI G+  A
Sbjct: 237 DAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDGFCKA 296

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +  E+  +   M R G V P +  YN L+       +  EA ++  +M   G+ PD  T
Sbjct: 297 KRFSEAKDMFRDMPRFG-VAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPDEFT 355

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            + +       G+   A   +  +  +GV  N      +I  YC+ G ++EAL     M 
Sbjct: 356 CSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALATCTRMT 415

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E GV PN+V ++ LI G  ++        +   M    + P+V+TY+ +++  +  G +D
Sbjct: 416 EVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHAKNGGID 475

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM-----------------T 413
                  +M + GI P+A   S+L  G  RE   + A   +M                 T
Sbjct: 476 AAFRFHKEMIENGISPNAITVSVLVDGLCRENRVQDAVRFVMEHSGIKYSDIHSFFSNFT 535

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
             E    PN  I+ T+I G   DG    A ++F  M + G+  +  T+  L+ G      
Sbjct: 536 TEEEPLIPNSAIYMTLIYGLYLDGQHYEAGKLFSYMRKSGMISDSFTYTLLIRGQCMLGY 595

Query: 474 PWRAEEILQIMKAFGVHPQK 493
              A  +   M   GV P +
Sbjct: 596 VLNAMMLYADMMKIGVKPMR 615



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 94/371 (25%), Positives = 174/371 (46%), Gaps = 4/371 (1%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
              ++ A S+ G ++EA+  F ++      P     N ++ G   A +   + +L D M 
Sbjct: 114 LGVLVIALSQMGLLDEALYVFRRLWT---LPALPACNAVLDGLVKARRSRCAWELFDEML 170

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G V P++ TYN L+ A   +  + +A  +  +M A  + P+V+TY ++     + G  
Sbjct: 171 RRGMV-PSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCI 229

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
             AE +   M+  G++PN  T  +++SG+C+   +  A    + +   G+ PN V+F  L
Sbjct: 230 GDAERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTL 289

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I GF +        ++   M  F V P V  Y+++M+    +G   +   ++ +M + G+
Sbjct: 290 IDGFCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGL 349

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            PD    SI+ +G     + + A   L  + E G + N   +  +I  +C +G+++ A+ 
Sbjct: 350 CPDEFTCSIVVRGLCDGGQIQVAARFLEGVREDGVNLNAAAYNALIDEYCRNGNLEEALA 409

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
              +M E GV PN+ ++ +L+ G+S+  +   A  I   M A G+ P   T+  L     
Sbjct: 410 TCTRMTEVGVEPNVVSYSSLIDGHSKLGKMQIAMAIYTEMVAKGIEPNVVTYTALIHGHA 469

Query: 505 ATGLTKEAKRI 515
             G    A R 
Sbjct: 470 KNGGIDAAFRF 480



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 141/314 (44%), Gaps = 7/314 (2%)

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +  A +Q G  D+A  V   +      P    C  ++ G  K  + + A      M   
Sbjct: 116 VLVIALSQMGLLDEALYVFRRLWTLPALP---ACNAVLDGLVKARRSRCAWELFDEMLRR 172

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ P++V +N LI             E+   M   +++P+VITY++++      G +   
Sbjct: 173 GMVPSVVTYNTLINACRYQGAVAKAQEMWDQMVARQIDPNVITYTSMICVLCEEGCIGDA 232

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           + +FD M +AG++P+ + Y++L  G+ +  +   A  L   ++ SG  PN V+FTT+I G
Sbjct: 233 ERLFDAMKEAGMRPNQYTYNVLMSGHCQGDDVNSAFVLYQELLNSGLIPNAVVFTTLIDG 292

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C       A ++F  M   GV+P +  + +LM G   +     A  + Q M   G+ P 
Sbjct: 293 FCKAKRFSEAKDMFRDMPRFGVAPTVPVYNSLMDGAFRSGDAQEALSLYQEMTRLGLCPD 352

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASY 552
           + T  ++       G  + A R L  ++ ++  N   A  +  ++   R  + E   A+ 
Sbjct: 353 EFTCSIVVRGLCDGGQIQVAARFLEGVR-EDGVNLNAAAYNALIDEYCRNGNLEEALATC 411

Query: 553 PNLLQI---PNVVS 563
             + ++   PNVVS
Sbjct: 412 TRMTEVGVEPNVVS 425


>gi|449438627|ref|XP_004137089.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 240/521 (46%), Gaps = 72/521 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           + + T L+ +    G+ +EA  +F  L E G +P+L+TY  +L     +   ++ I  ++
Sbjct: 220 IYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLV 279

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++ +G+ PD   +N +I++       EEA + F +MK +G +P   TYN L+  YG +
Sbjct: 280 DSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKS 339

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +P E++++L  M   G   P++ TYN L+ A+  +  + EA  +  +M   G+KPDV T
Sbjct: 340 RRPREAMEVLKEMEASG-FAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFT 398

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+ + + + G+ D A +V  EM   G QPN  T   +I  +   G   E ++    +K
Sbjct: 399 YTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIK 458

Query: 311 EYGVHPNLVIFNLL------------IKGFVEIMDRDGV--------------------D 338
                P++V +N L            + G  + M R G                     D
Sbjct: 459 ICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFD 518

Query: 339 EVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
           + +A+   M +  V PD+ TY+ ++ A +  G  ++ +++  +M     KP+   Y  L 
Sbjct: 519 QAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLL 578

Query: 396 KGYVREQEPEK----AEE-----------LLMTMI--------------------ESGFH 420
             Y   +E E+    AEE           LL T++                    E GF 
Sbjct: 579 HAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFS 638

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P++     ++S +     + +  E+ + + + G +P+L T+ +LM+ YS      ++E+I
Sbjct: 639 PDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDI 698

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           L+ + A G+ P   +F  +  A    G  KEA RI +++K+
Sbjct: 699 LREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKD 739



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 229/474 (48%), Gaps = 23/474 (4%)

Query: 62  FCMNKESCRTVRS---MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT 118
           F  N+E   ++ S   +  +++ L + G+   A ++ ++L   G    +  YT+L+ A  
Sbjct: 172 FVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYA 231

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESG----NMEEAMDTFWKMKESGLT 174
              R+     +  ++EE G  P  I +N ++N + + G     +   +D+   MK SG+ 
Sbjct: 232 SNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDS---MKSSGVA 288

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P   TYNTLI         EE+ ++ + M   G   P+  TYN L+  +   +   EA  
Sbjct: 289 PDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAG-FSPDKVTYNALLDVYGKSRRPREAME 347

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           V+ +M ASG  P +VTYN++ +AYA++G  D+A E+  +M   G++P+  T   ++SG+ 
Sbjct: 348 VLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFE 407

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIK------GFVEIMDRDGVDEVLALMKEFR 348
           K GK   A++    M+  G  PN+  FN LIK       FVE+M      +V   +K   
Sbjct: 408 KTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMM------KVFEEIKICE 461

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             PD++T++T++  +   G   +   +F +M +AG  P+   ++ L   Y R    ++A 
Sbjct: 462 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAM 521

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            +   M+++G  P++  +  +++     G  +++ +V  +M +    PN  T+ +L+  Y
Sbjct: 522 AIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAY 581

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +  ++  R   + + + +  + PQ      L      + L  E +R   +++ +
Sbjct: 582 ANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQ 635



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 221/475 (46%), Gaps = 5/475 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   L+++    G   EA  + + +++ G KP + TYTTLL+      + +    + 
Sbjct: 360 SIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVF 419

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G  P+   FNA+I      GN  E M  F ++K     P   T+NTL+  +G  
Sbjct: 420 EEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQN 479

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E   +   M R G V P   T+N L+ A+       +A  +  +M  +G+ PD+ T
Sbjct: 480 GMDSEVSGVFKEMKRAGFV-PERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLST 538

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +  A A+ G  +Q+E+V+ EM+    +PN  T   ++  Y    +++     A  + 
Sbjct: 539 YNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIY 598

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              + P  V+   L+  + +       +     ++E   +PD+ T + +++ +     + 
Sbjct: 599 SGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVS 658

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K  EI + +  +G  P    Y+ L   Y R +  EK+E++L  +I  G  P+++ F T+I
Sbjct: 659 KTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVI 718

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
             +C +G M  A  +F +M + G++P++ T+ T +  Y+       A ++++ M   G  
Sbjct: 719 FAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNGCK 778

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHK 545
           P ++T+  L +         EA   +S ++N + +   + E  +    LERL  K
Sbjct: 779 PNQNTYNSLIDWFCKLNRRDEASSFISNLRNLDPSVTKDEERRL----LERLNKK 829



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 177/382 (46%), Gaps = 40/382 (10%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT----LIKGYGIAGKPEESVKLL 200
            ++++N   +S +++E +   ++    GL  T+ + +     +IKG     K E ++ + 
Sbjct: 111 LDSLLNPEFDSSSLDEILLQLFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVF 170

Query: 201 DLMSREGNVKPNLR--TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
             +    +    L      V++     E   + A +++H +   G+  D+  Y ++ TAY
Sbjct: 171 YFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAY 230

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
           A NG   +A  V  ++E  G +P   T  +I++ Y K G     + +++           
Sbjct: 231 ASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMG-----MPWSK----------- 274

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
                 I G V+ M   G            V PD+ TY+T++++       ++  E+F++
Sbjct: 275 ------IAGLVDSMKSSG------------VAPDLYTYNTLISSCRRGSLYEEAAEVFEE 316

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M  AG  PD   Y+ L   Y + + P +A E+L  M  SGF P++V + ++IS +  DG 
Sbjct: 317 MKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGL 376

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +D A+E+  +M + G+ P++ T+ TL+ G+ +  +   A ++ + M+  G  P   TF  
Sbjct: 377 LDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNA 436

Query: 499 LAEARRATGLTKEAKRILSKIK 520
           L +     G   E  ++  +IK
Sbjct: 437 LIKMHGNRGNFVEMMKVFEEIK 458


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 207/425 (48%), Gaps = 4/425 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G  + A+ +F  L   G  P+L T+ T++     +  F +   ++ +V+E G+     F 
Sbjct: 254 GDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFL 313

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +I+A    G   +  ++   +  +   P  +TYN LI      GK E +  LLD  S+
Sbjct: 314 NNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASK 373

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G +  NL +Y  L++A+C  K    A  ++ ++A  G KPD+VTY  +      +G  D
Sbjct: 374 KGLILTNL-SYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMD 432

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A  + V++   GV P+     +++SG CK G+   A      M +  + P+  ++  LI
Sbjct: 433 DAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLI 492

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF+   D D   +V  L  E  V  DV+ ++ ++  +  +G +D+     + M +  + 
Sbjct: 493 DGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLV 552

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   YS +  GYV++Q+   A ++   M ++   PNVV +T++I+G+C  G    A E 
Sbjct: 553 PDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEET 612

Query: 446 FDKMCEHGVSPNLKTFETLMWGYS-EARQPWRAEEILQIMKAFGVHPQKSTF--LLLAEA 502
           F +M    + PN+ T+ TL+  ++ E+    +A    ++M      P + TF  LL    
Sbjct: 613 FKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFV 672

Query: 503 RRATG 507
           ++ +G
Sbjct: 673 KKTSG 677



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 107/487 (21%), Positives = 218/487 (44%), Gaps = 14/487 (2%)

Query: 67  ESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           +S   V +   L++ +++  + ++A+ +++ + E G      +   ++  +  + +    
Sbjct: 165 DSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEG 224

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
             ++      G  P+ +F+N +I  + + G++E A   F ++K  G  PT  T+ T+I G
Sbjct: 225 RKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMING 284

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
           +   G    S +LL+ +   G ++  +   N ++ A        +    +  + A+  KP
Sbjct: 285 FCKKGDFVASDRLLEEVKERG-LRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKP 343

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           D+ TYN +     + G+ + A  ++ E    G+     +   +I  YCK  +   A +  
Sbjct: 344 DIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLL 403

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             + E G  P++V + +LI G V     D    +   + +  V+PD   Y+ +M+     
Sbjct: 404 LQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G     K +F +M    I PDA+ Y+ L  G++R  + ++A ++    +E G   +VV  
Sbjct: 464 GRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHH 523

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
             +I G+C  G +D A+   ++M E  + P+  T+ T++ GY + +    A +I + M+ 
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEK 583

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP----VESLERL 542
               P   T+  L       G    A         +E   EM++ + +P      +L R 
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFSLA---------EETFKEMQSRDLVPNVVTYTTLIRS 634

Query: 543 YHKEATT 549
           + KE++T
Sbjct: 635 FAKESST 641



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 94/408 (23%), Positives = 186/408 (45%), Gaps = 2/408 (0%)

Query: 111 TTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF-WKMK 169
           ++ L  L   + FN I  ++  +    +       + V++A++ESG + +A++ + + ++
Sbjct: 103 SSFLKLLARHRIFNEIEDVLGNLRNENVKLTHEALSHVLHAYAESGFLSKAVEIYDYVVE 162

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
                P     N L+     + + E++ K+ D M   G    N  T  ++V+  C+E  +
Sbjct: 163 LYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTC-IMVKGMCSEGKV 221

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
            E   ++      G  P++V YNTI   Y + G+ + A+ V  E++  G  P   T G +
Sbjct: 222 EEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTM 281

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           I+G+CK+G    + R    +KE G+   +   N +I        +    E +  +     
Sbjct: 282 INGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDC 341

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
            PD+ TY+ ++N     G  +    + D+  K G+     +Y+ L + Y + +E + A +
Sbjct: 342 KPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASK 401

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           LL+ + E G  P++V +  +I G    G MD A+ +  K+ + GVSP+   +  LM G  
Sbjct: 402 LLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLC 461

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           +  +   A+ +   M    + P    +  L +    +G   EA+++ +
Sbjct: 462 KTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFT 509



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 109/470 (23%), Positives = 211/470 (44%), Gaps = 22/470 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L + GK + A  + +   + G   + ++Y  L+ A    K ++    ++ Q+ E G
Sbjct: 351 LINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERG 410

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + +  +I+    SG+M++A++   K+ + G++P  + YN L+ G    G+   + 
Sbjct: 411 CKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPA- 469

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KLL     + ++ P+   Y  L+  +    +  EA  V       G+K DVV +N +   
Sbjct: 470 KLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKG 529

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + ++G  D+A   +  M    + P+  T   II GY K+  +  A++  R M++    PN
Sbjct: 530 FCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPN 589

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST-AGFMDKCKEIF 376
           +V +  LI GF    D    +E    M+   + P+V+TY+T++ +++  +  ++K    +
Sbjct: 590 VVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLEKAVYYW 649

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQ------EPEKAE--------ELLMTMIESGFHPN 422
           + M      P+   ++ L +G+V++       EP+           E    M   G+  +
Sbjct: 650 ELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDH 709

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA--RQPWRAEEI 480
              + +++   C  G +  A  + D+M + G SP+  +F  ++ G+      + WR  + 
Sbjct: 710 GAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFCVVGNSKQWRNMDF 769

Query: 481 LQI-MKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEME 529
             +  K   V  + S  L   E      +  EA  IL  +  K  T E E
Sbjct: 770 RNLDEKGLEVAVRYSRVL---EQHLPKAVICEASTILHAMVEKADTKEPE 816


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/338 (29%), Positives = 180/338 (53%), Gaps = 1/338 (0%)

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           +++KLLD M  +G+ KP++ TYNVL+   C E  + EA   ++ M + G +P+V+T+N I
Sbjct: 100 QAMKLLDEMRNKGS-KPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNII 158

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             +    G    AE+++ +M   G  P+  T  I+I+  C++G +  A+     M  +G 
Sbjct: 159 LRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGC 218

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            PN + +N L+ GF +    D   E L +M      PD++TY+T++ A    G +D   E
Sbjct: 219 TPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVE 278

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           I + +   G  P    Y+ +  G  +  + E+A +LL  M   G  P+++ +++++SG  
Sbjct: 279 ILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLS 338

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +G +D AI+ F  +   G+ PN  T+ ++M G  ++RQ  RA + L  M +    P ++
Sbjct: 339 REGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEA 398

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
           T+ +L E     GL KEA  +L+++ ++    +  AE+
Sbjct: 399 TYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQ 436



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 86/331 (25%), Positives = 171/331 (51%), Gaps = 1/331 (0%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           NK S   V +   L+N + + G+  EA    NN+   G +P+++T+  +L ++    R+ 
Sbjct: 110 NKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWM 169

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
               ++S +   G  P  + FN +IN     G +  A+D   KM   G TP + +YN L+
Sbjct: 170 DAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLL 229

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G+    K + +++ LD+M   G   P++ TYN L+ A C +  +  A  +++++++ G 
Sbjct: 230 HGFCKEKKMDRAIEYLDIMVSRG-CYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGC 288

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            P ++TYNT+    ++ G+ ++A +++ EM   G++P+  T   ++SG  +EGK+ EA++
Sbjct: 289 SPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIK 348

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
           F   ++  G+ PN + +N ++ G  +    D   + LA M   R  P   TY+ ++   +
Sbjct: 349 FFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIA 408

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
             G   +  ++ +++   G+   + A  + A
Sbjct: 409 YEGLAKEALDLLNELCSRGLVKKSSAEQVAA 439



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 170/364 (46%), Gaps = 12/364 (3%)

Query: 63  CMNKES---CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           C+N+++   C ++   +  + +  +     +A  + + +   G KP +VTY  L+  +  
Sbjct: 70  CINQQTLFPCFSLSGFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICK 129

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
           + R +     ++ +   G  P+ I  N ++ +   +G   +A      M   G +P+  T
Sbjct: 130 EGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVT 189

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           +N LI      G    ++ +L+ M   G   PN  +YN L+  +C EK +  A   +  M
Sbjct: 190 FNILINFLCRQGLLGRAIDILEKMPMHG-CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 248

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
            + G  PD+VTYNT+ TA  ++G+ D A E++ ++   G  P   T   +I G  K GK 
Sbjct: 249 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 308

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFR---VNPDVIT 355
           + A++    M+  G+ P+++ ++ L+ G    + R+G VDE +    +     + P+ IT
Sbjct: 309 ERAIKLLDEMRRKGLKPDIITYSSLVSG----LSREGKVDEAIKFFHDLEGLGIRPNAIT 364

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y++IM     +   D+  +    M     KP    Y+IL +G   E   ++A +LL  + 
Sbjct: 365 YNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELC 424

Query: 416 ESGF 419
             G 
Sbjct: 425 SRGL 428



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 61/229 (26%), Positives = 112/229 (48%)

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           CKE  + +A++    M+  G  P++V +N+LI G  +    D   + L  M  +   P+V
Sbjct: 93  CKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNV 152

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           IT++ I+ +  + G     +++  DM + G  P    ++IL     R+    +A ++L  
Sbjct: 153 ITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEK 212

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M   G  PN + +  ++ G+C +  MDRAIE  D M   G  P++ T+ TL+    +  +
Sbjct: 213 MPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGK 272

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              A EIL  + + G  P   T+  + +     G T+ A ++L +++ K
Sbjct: 273 VDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRK 321



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 59/130 (45%)

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            +S   +   +E    +A +LL  M   G  P+VV +  +I+G C +G +D AI+  + M
Sbjct: 84  GFSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNM 143

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
             +G  PN+ T   ++       +   AE++L  M   G  P   TF +L       GL 
Sbjct: 144 PSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLL 203

Query: 510 KEAKRILSKI 519
             A  IL K+
Sbjct: 204 GRAIDILEKM 213



 Score = 38.9 bits (89), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 22/97 (22%), Positives = 49/97 (50%)

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           F+  +   C +  + +A+++ D+M   G  P++ T+  L+ G  +  +   A + L  M 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           ++G  P   T  ++  +  +TG   +A+++LS +  K
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRK 181


>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
 gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 209/437 (47%), Gaps = 2/437 (0%)

Query: 64  MNKESCRTVR-SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K +CR       + +  L+ + +   A+  ++ +I  G   +  TY+  ++ L   K 
Sbjct: 35  MTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKN 94

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F  I  ++  ++  G  PD   +N  +N       ++ A+     M E G  P   TY  
Sbjct: 95  FVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTI 154

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G   AG+ + +V++   M R+G   P+ +    LV   C++  +  A+ +       
Sbjct: 155 VINGLCRAGRFDSAVEIWRNMVRKG-FSPDEKACRALVLGLCHDGKVDLAYELTVGAMRG 213

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            +K     YN++   + Q G  D+A+ +I  M  NG +P+  T  ++++  C E  ++EA
Sbjct: 214 RIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYCCDELLLEEA 273

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
               + M+  GV P++  +N L+KG  +    D    ++    E +   DV++Y+TI+ A
Sbjct: 274 ENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKA 333

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
             TA    +  ++F++MG  GI PD   ++IL K ++RE     A++LL  M   G  P+
Sbjct: 334 LCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPD 393

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            V++TTI+   C  G M  A  VF  M E G++P++ ++  L+ G   A +   A  + +
Sbjct: 394 RVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYE 453

Query: 483 IMKAFGVHPQKSTFLLL 499
            M   G  P + TF L+
Sbjct: 454 DMHTGGPCPDEVTFKLI 470



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 184/388 (47%), Gaps = 3/388 (0%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           +N L    +   A  +   ++E G +P +VTYT ++  L    RF+S   I   +   G 
Sbjct: 121 LNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGF 180

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            PD     A++      G ++ A +         +  + S YN+LI G+  AG  +++  
Sbjct: 181 SPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQS 240

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           ++  M R G  +P+L TYNVL+   C+E  + EA N+M KM  SG++PDV +YN +    
Sbjct: 241 IISFMRRNG-CEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGL 299

Query: 259 AQNGEADQAEEVIV-EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            +    D+A  ++V +ME  G+  +  +   II   C     K A +    M   G+ P+
Sbjct: 300 CKANRLDKAYMMMVNKMEAKGL-CDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPD 358

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V F +LIK F+     +   ++L  M    + PD + Y+TI++     G M     +F 
Sbjct: 359 VVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFC 418

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM ++GI PD  +Y+ L  G  R     +A  L   M   G  P+ V F  II G   + 
Sbjct: 419 DMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEK 478

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLM 465
            +  A  V+D+M E G + +    ETL+
Sbjct: 479 KLSVACRVWDQMMEKGFTLDGAVSETLV 506



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/401 (22%), Positives = 156/401 (38%), Gaps = 71/401 (17%)

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           SI +N  I         + A   + +M   G +  + TY+  I G           KLL+
Sbjct: 44  SIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLE 103

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M R G V P++  YN+ +   C E  +  A  V+  M   G +PD+VTY  +     + 
Sbjct: 104 DMDRLGYV-PDIWAYNIYLNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRA 162

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           G  D A E+   M   G  P+ + C  ++ G C +GK+  A           +  +  I+
Sbjct: 163 GRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIY 222

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD---- 377
           N LI GF +                                   AG++DK + I      
Sbjct: 223 NSLINGFCQ-----------------------------------AGWIDKAQSIISFMRR 247

Query: 378 -------------------------------DMGKAGIKPDAHAYSILAKGYVREQEPEK 406
                                           M ++G++PD ++Y+ L KG  +    +K
Sbjct: 248 NGCEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDK 307

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  +++  +E+    +VV + TII   C+     RA ++F++M   G++P++ TF  L+ 
Sbjct: 308 AYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIK 367

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            +        A+++L  M   G+ P +  +  + +    TG
Sbjct: 368 AFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTG 408



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 35/136 (25%), Positives = 62/136 (45%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+ + +  G    A+ + + +   G  P  V YTT++  L    +    HS+  
Sbjct: 359 VVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFC 418

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + E+G+ PD + +NA+IN    +  + EAM  +  M   G  P   T+  +I G     
Sbjct: 419 DMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEK 478

Query: 192 KPEESVKLLDLMSREG 207
           K   + ++ D M  +G
Sbjct: 479 KLSVACRVWDQMMEKG 494



 Score = 45.8 bits (107), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 39/175 (22%), Positives = 68/175 (38%), Gaps = 35/175 (20%)

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           + Y   ++++  AG +D+  + FD+M K+  +  +  Y+      VR+   + AE+    
Sbjct: 10  LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69

Query: 414 MIESGFHPNVVIFTTIISG--------------------------W---------CSDGS 438
           MI  GF  N   ++  ISG                          W         C +  
Sbjct: 70  MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           +D A+ V   M E G  P++ T+  ++ G   A +   A EI + M   G  P +
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDE 184



 Score = 39.7 bits (91), Expect = 4.9,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 43/103 (41%), Gaps = 2/103 (1%)

Query: 52  TDSQPQTHCSFCMNKESCRT--VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVT 109
           T      H  FC   ES  T  V S   L+N L    +  EA  ++ ++  GG  P  VT
Sbjct: 407 TGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVT 466

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAF 152
           +  ++  L  +K+ +    +  Q+ E G   D      ++NA 
Sbjct: 467 FKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAI 509


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 220/451 (48%), Gaps = 16/451 (3%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +M  L+  L E G+   A  +F  +  G   P+  ++  LL    +  R     + +  +
Sbjct: 69  TMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDM 128

Query: 134 EENGMDPDSIFFNAVINAF---SESGN-MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
            ++     +  +N V+      ++S N +E+AM+ F +MK SG+ P   +Y+ L+     
Sbjct: 129 RKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSD 188

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +G+  E+  L   M+      P++ TYNVL+  +C      EA ++M ++  +G +P+V 
Sbjct: 189 SGRMAEAHALFSAMT----CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVF 244

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY+ I   Y +  + ++A EV ++M  +   PN  T   +I+G+CK G +++A++    M
Sbjct: 245 TYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM 304

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTA 366
           ++ G    +V +N LI    +   R GV   + L  +     + P ++TY++++  +  A
Sbjct: 305 EKIGCKATIVTYNTLIDSLCK--KRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDA 362

Query: 367 GFMDKCKEIFDDM-GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
             + +  + FD+M GK    P+   YSIL  G  + +  ++A + L  M   G+ P VV 
Sbjct: 363 RRLSEAMQYFDEMEGKCA--PNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVT 420

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +  +I+G+C  G +  A+  F+KM   G +PN   F TL+ G  +A +      +L  M 
Sbjct: 421 YGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMH 480

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           A G  P   T+  L     +    ++A+R+ 
Sbjct: 481 AEGCKPDVITYNCLISGLCSANRVEDAQRLF 511



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 203/453 (44%), Gaps = 17/453 (3%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK----RFNSI 126
           T  S   L+      G+ ++A A   ++ +     +  TY  +L  L  +     R    
Sbjct: 101 TSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQA 160

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
                +++ +G++PD   ++ +++A S+SG M EA   F  M  S   P   TYN L+ G
Sbjct: 161 MEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDG 217

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
           Y   G+  E+  L+  + + G  +PN+ TY++++  +C    + EAW V  KM  S   P
Sbjct: 218 YCKIGQTYEAQSLMKEILKAG-YEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVP 276

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE-GKIKEALRF 305
           + VT+NT+   + + G  + A ++  EME  G +    T   +I   CK+ G +  A+  
Sbjct: 277 NAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDL 336

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF--RVNPDVITYSTIMNAW 363
              ++  G+ P +V +N LI+GF    D   + E +    E   +  P+VITYS +++  
Sbjct: 337 FNKLEGAGLTPTIVTYNSLIQGFC---DARRLSEAMQYFDEMEGKCAPNVITYSILIDGL 393

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
                M +  +  +DM   G  P    Y  L  G+ +  E + A      M  +G  PN 
Sbjct: 394 CKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNT 453

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           VIF T+I G C     +  + +   M   G  P++ T+  L+ G   A    R E+  ++
Sbjct: 454 VIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSAN---RVEDAQRL 510

Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
                  P  +TF  L     A    +EA+ IL
Sbjct: 511 FDGMACAPNVTTFNFLIRGLCAQKKVEEARNIL 543



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 178/371 (47%), Gaps = 9/371 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++L + G+  EA A+F+ +      P ++TY  L+       +     S+M ++ + G
Sbjct: 182 LLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAG 238

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            +P+   ++ +IN + +   +EEA + F KM ES   P   T+NTLI G+  AG  E+++
Sbjct: 239 YEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAI 298

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKN-ITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           KL   M + G  K  + TYN L+ + C ++  +  A ++ +K+  +G+ P +VTYN++  
Sbjct: 299 KLFAEMEKIG-CKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            +       +A +   EME     PN  T  I+I G CK  ++KEA +    MK +G  P
Sbjct: 358 GFCDARRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTP 416

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
            +V +  LI GF +  +          MK     P+ + ++T+++    A   +    + 
Sbjct: 417 TVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLL 476

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             M   G KPD   Y+ L  G       E A+ L   M  +   PNV  F  +I G C+ 
Sbjct: 477 CHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGMACA---PNVTTFNFLIRGLCAQ 533

Query: 437 GSMDRAIEVFD 447
             ++ A  + D
Sbjct: 534 KKVEEARNILD 544



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 95/368 (25%), Positives = 178/368 (48%), Gaps = 13/368 (3%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           NA+++    +   ++A+  F ++      P   TYN LI+G+   G+  ++V +   M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G + PN  T N L+   C    ++ A  +  +M A    P   ++N +   +   G   
Sbjct: 61  SG-LLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVR 119

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK----IKEALRFARTMKEYGVHPNLVIF 321
            A   + +M  +       T  +++ G C E K    +++A+ F + MK  GV P+L  +
Sbjct: 120 DALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESY 179

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           ++L+     + D   + E  AL      +PD++TY+ +M+ +   G   + + +  ++ K
Sbjct: 180 HILLSA---LSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILK 236

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
           AG +P+   YSI+   Y +  + E+A E+ M MIES   PN V F T+I+G+C  G ++ 
Sbjct: 237 AGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLED 296

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP-WRAEEILQIMKAFGVHPQKSTFLLL- 499
           AI++F +M + G    + T+ TL+    + R   + A ++   ++  G+ P   T+  L 
Sbjct: 297 AIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLI 356

Query: 500 ---AEARR 504
               +ARR
Sbjct: 357 QGFCDARR 364



 Score = 60.1 bits (144), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 3/131 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+N   + G+ + A   F  +   G  P+ V + TL+  L   +R N    ++
Sbjct: 417 TVVTYGGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLL 476

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   G  PD I +N +I+    +  +E+A   F  M      P  +T+N LI+G    
Sbjct: 477 CHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFDGM---ACAPNVTTFNFLIRGLCAQ 533

Query: 191 GKPEESVKLLD 201
            K EE+  +LD
Sbjct: 534 KKVEEARNILD 544


>gi|449530359|ref|XP_004172163.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Cucumis sativus]
          Length = 831

 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 132/521 (25%), Positives = 240/521 (46%), Gaps = 72/521 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           + + T L+ +    G+ +EA  +F  L E G +P+L+TY  +L     +   ++ I  ++
Sbjct: 220 IYAYTSLITAYASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLV 279

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             ++ +G+ PD   +N +I++       EEA + F +MK +G +P   TYN L+  YG +
Sbjct: 280 DSMKSSGVAPDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAGFSPDKVTYNALLDVYGKS 339

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            +P E++++L  M   G   P++ TYN L+ A+  +  + EA  +  +M   G+KPDV T
Sbjct: 340 RRPREAMEVLKEMEASG-FAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFT 398

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+ + + + G+ D A +V  EM   G QPN  T   +I  +   G   E ++    +K
Sbjct: 399 YTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIK 458

Query: 311 EYGVHPNLVIFNLL------------IKGFVEIMDRDGV--------------------D 338
                P++V +N L            + G  + M R G                     D
Sbjct: 459 ICECVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFD 518

Query: 339 EVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
           + +A+   M +  V PD+ TY+ ++ A +  G  ++ +++  +M     KP+   Y  L 
Sbjct: 519 QAMAIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLL 578

Query: 396 KGYVREQEPEK----AEE-----------LLMTMI--------------------ESGFH 420
             Y   +E E+    AEE           LL T++                    E GF 
Sbjct: 579 HAYANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFS 638

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P++     ++S +     + +  E+ + + + G +P+L T+ +LM+ YS      ++E+I
Sbjct: 639 PDITTLNAMVSIYGRRRMVSKTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDI 698

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           L+ + A G+ P   +F  +  A    G  KEA RI +++K+
Sbjct: 699 LREIIAKGMKPDIISFNTVIFAYCRNGRMKEASRIFAEMKD 739



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 229/474 (48%), Gaps = 23/474 (4%)

Query: 62  FCMNKESCRTVRS---MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT 118
           F  N+E   ++ S   +  +++ L + G+   A ++ ++L   G    +  YT+L+ A  
Sbjct: 172 FVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAYA 231

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESG----NMEEAMDTFWKMKESGLT 174
              R+     +  ++EE G  P  I +N ++N + + G     +   +D+   MK SG+ 
Sbjct: 232 SNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMGMPWSKIAGLVDS---MKSSGVA 288

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P   TYNTLI         EE+ ++ + M   G   P+  TYN L+  +   +   EA  
Sbjct: 289 PDLYTYNTLISSCRRGSLYEEAAEVFEEMKAAG-FSPDKVTYNALLDVYGKSRRPREAME 347

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           V+ +M ASG  P +VTYN++ +AYA++G  D+A E+  +M   G++P+  T   ++SG+ 
Sbjct: 348 VLKEMEASGFAPSIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFE 407

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIK------GFVEIMDRDGVDEVLALMKEFR 348
           K GK   A++    M+  G  PN+  FN LIK       FVE+M      +V   +K   
Sbjct: 408 KTGKDDYAMKVFEEMRVAGCQPNICTFNALIKMHGNRGNFVEMM------KVFEEIKICE 461

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             PD++T++T++  +   G   +   +F +M +AG  P+   ++ L   Y R    ++A 
Sbjct: 462 CVPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISAYSRCGFFDQAM 521

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            +   M+++G  P++  +  +++     G  +++ +V  +M +    PN  T+ +L+  Y
Sbjct: 522 AIYRRMLDAGVTPDLSTYNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAY 581

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +  ++  R   + + + +  + PQ      L      + L  E +R   +++ +
Sbjct: 582 ANGKEVERMSALAEEIYSGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQ 635



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/475 (24%), Positives = 220/475 (46%), Gaps = 5/475 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +   L+++    G   EA  + + +++ G KP + TYTTLL+      + +    + 
Sbjct: 360 SIVTYNSLISAYARDGLLDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVF 419

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G  P+   FNA+I      GN  E M  F ++K     P   T+NTL+  +G  
Sbjct: 420 EEMRVAGCQPNICTFNALIKMHGNRGNFVEMMKVFEEIKICECVPDIVTWNTLLAVFGQN 479

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E   +   M R G V P   T+N L+ A+       +A  +  +M  +G+ PD+ T
Sbjct: 480 GMDSEVSGVFKEMKRAGFV-PERDTFNTLISAYSRCGFFDQAMAIYRRMLDAGVTPDLST 538

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +  A A+ G  +Q+E+V+ EM+    +PN  T   ++  Y    +++     A  + 
Sbjct: 539 YNAVLAALARGGLWEQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEVERMSALAEEIY 598

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              + P  V+   L+  + +       +     ++E   +PD+ T + +++ +     + 
Sbjct: 599 SGIIEPQAVLLKTLVLVYSKSDLLTETERAFLELREQGFSPDITTLNAMVSIYGRRRMVS 658

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           K  EI + +  +G  P    Y+ L   Y R +  EK+E++L  +I  G  P+++ F T+I
Sbjct: 659 KTNEILNFIKDSGFTPSLTTYNSLMYMYSRTEHFEKSEDILREIIAKGMKPDIISFNTVI 718

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
             +C +G M  A  +F +M + G++P++ T+ T +  Y+       A ++++ M      
Sbjct: 719 FAYCRNGRMKEASRIFAEMKDFGLAPDVITYNTFIASYASDSMFIEAIDVVKYMIKNECK 778

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHK 545
           P ++T+  L +         EA   +S ++N + +   + E  +    LERL  K
Sbjct: 779 PNQNTYNSLIDWFCKLNRRDEANSFISNLRNLDPSVTKDEERRL----LERLNKK 829



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 177/382 (46%), Gaps = 40/382 (10%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT----LIKGYGIAGKPEESVKLL 200
            ++++N   +S +++E +   ++    GL  T+ + +     +IKG     K E ++ + 
Sbjct: 111 LDSLLNPEFDSSSLDEILLQLFETSSDGLNFTSDSVSFDILGIIKGLVFYKKNELALCVF 170

Query: 201 DLMSREGNVKPNLR--TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
             +    +    L      V++     E   + A +++H +   G+  D+  Y ++ TAY
Sbjct: 171 YFVRNREDFASILSNSVVAVIISVLGKEGRASFAASLLHDLRNDGVHIDIYAYTSLITAY 230

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
           A NG   +A  V  ++E  G +P   T  +I++ Y K G     + +++           
Sbjct: 231 ASNGRYREAVMVFKKLEEEGCRPTLITYNVILNVYGKMG-----MPWSK----------- 274

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
                 I G V+ M   G            V PD+ TY+T++++       ++  E+F++
Sbjct: 275 ------IAGLVDSMKSSG------------VAPDLYTYNTLISSCRRGSLYEEAAEVFEE 316

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M  AG  PD   Y+ L   Y + + P +A E+L  M  SGF P++V + ++IS +  DG 
Sbjct: 317 MKAAGFSPDKVTYNALLDVYGKSRRPREAMEVLKEMEASGFAPSIVTYNSLISAYARDGL 376

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +D A+E+  +M + G+ P++ T+ TL+ G+ +  +   A ++ + M+  G  P   TF  
Sbjct: 377 LDEAMELKSQMVKKGIKPDVFTYTTLLSGFEKTGKDDYAMKVFEEMRVAGCQPNICTFNA 436

Query: 499 LAEARRATGLTKEAKRILSKIK 520
           L +     G   E  ++  +IK
Sbjct: 437 LIKMHGNRGNFVEMMKVFEEIK 458


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 213/435 (48%), Gaps = 3/435 (0%)

Query: 87   KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
            K  +A  +F  +++    PS+V +T +L A+    +F+ +  +  ++E  G+  D   F 
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 147  AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
             +I+ F        A+    KM + G  P+  T  +L+ G+    + +E+V L+D M+  
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 207  GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            G ++PN+  YN ++   C  +++  A  + + M   G+  D VTYNT+ +    +G    
Sbjct: 715  G-LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTD 773

Query: 267  AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
            A  ++ +M    + PN      +I  + KEG + EA    + M    VHPN++ +N LI 
Sbjct: 774  AARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLIN 833

Query: 327  GFVEIMDRDG-VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF  I  R G    +  LM      PDV+TY+T++  +  +  ++   ++F +M   G+ 
Sbjct: 834  GFC-IQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLV 892

Query: 386  PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
             DA  Y+ L  GY +  +   A+++   M++ G  P++V +  ++   C++G +++A+ +
Sbjct: 893  GDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVM 952

Query: 446  FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
             + + ++ +  ++ T+  ++ G     +   A  + + +   GV      ++ +      
Sbjct: 953  VEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCR 1012

Query: 506  TGLTKEAKRILSKIK 520
             GL +EA ++ +++K
Sbjct: 1013 NGLRREADKLCTRMK 1027



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 204/398 (51%), Gaps = 4/398 (1%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
            S T L++      +   A A+   +++ G +PS+VT  +LL       RF    S++  +
Sbjct: 652  SFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 711

Query: 134  EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             E G++P+ + +N VIN   ++ ++  A++ F+ M++ G+     TYNTLI G   +G+ 
Sbjct: 712  AELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRW 771

Query: 194  EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             ++ +LL D++ R+  + PN+  +  L+  +  E N+ EA N+  +M    + P+++TYN
Sbjct: 772  TDAARLLRDMVKRK--IDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYN 829

Query: 253  TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            ++   +   G    A+ +   M   G  P+  T   +I+G+CK  ++++ ++    M   
Sbjct: 830  SLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQ 889

Query: 313  GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
            G+  +   +N LI G+ +    +   +V   M +  V PD++TY+ +++     G ++K 
Sbjct: 890  GLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKA 949

Query: 373  KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
              + +D+ K  +  D   Y+I+ +G  R  + ++A  L  ++   G   + + + T+ISG
Sbjct: 950  LVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISG 1009

Query: 433  WCSDGSMDRAIEVFDKMCEHGVSPNLKTF-ETLMWGYS 469
             C +G    A ++  +M E G  P+ + + ETL   Y+
Sbjct: 1010 LCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDHYT 1047



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 104/445 (23%), Positives = 208/445 (46%), Gaps = 2/445 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           KL    +   + ++A  +F  +++    PS+V +T LL A+   +R+ ++     Q+E  
Sbjct: 35  KLRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELF 94

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G+  D   F  +I+ F     +  A+    KM + G  P+  T+ +L+ G+ +  +  ++
Sbjct: 95  GISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDA 154

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-MKPDVVTYNTIA 255
             L+  M + G  +PN+  YN L+   C   ++  A  ++++M   G +  D+VTYNT+ 
Sbjct: 155 FSLVASMVKSG-YEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLL 213

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           T    +GE  QA  ++ +M    + P+  T   +I  + K+G + EA    + M +  + 
Sbjct: 214 TGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIG 273

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN V +N LI G           +   LM      P+V+TY+T++N +  +  ++   ++
Sbjct: 274 PNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKL 333

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F  M + G+  D   Y+ L  GY +  +   A+++   M+  G  P+++    ++ G C 
Sbjct: 334 FQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCV 393

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G +  A+  F+ M        +  +  ++ G  +A +   A E+   +   GV P   T
Sbjct: 394 NGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDART 453

Query: 496 FLLLAEARRATGLTKEAKRILSKIK 520
           + ++       G  +EA  +  ++K
Sbjct: 454 YTIMILGLCKNGPRREADELFRRMK 478



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 94/382 (24%), Positives = 194/382 (50%), Gaps = 2/382 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T L++      +   A +I   +++ G+ PS+VT+ +LL    ++ R +   S+++ +
Sbjct: 102 SFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASM 161

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIAGK 192
            ++G +P+ + +N +I+   ++G++  A++   +M++ G L     TYNTL+ G   +G+
Sbjct: 162 VKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGE 221

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             ++ ++L  M++   + P++ T+  L+ A+  + N+ EA  +  +M  S + P+ VTYN
Sbjct: 222 WRQAARILRDMTKR-RINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYN 280

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++      +G    A++    M   G  PN  T   +I+G+CK  ++++ ++  + M   
Sbjct: 281 SLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYRE 340

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+  +   +N LI G+ ++       ++ + M    V PD+IT+  +++     G +   
Sbjct: 341 GLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSA 400

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
              F+DM          AY+I+  G  +  + E+A EL   +   G  P+   +T +I G
Sbjct: 401 MVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILG 460

Query: 433 WCSDGSMDRAIEVFDKMCEHGV 454
            C +G    A E+F +M E G+
Sbjct: 461 LCKNGPRREADELFRRMKEDGI 482



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 195/424 (45%), Gaps = 4/424 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIE-GGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           +V   T+L+ + I   +  E    F+  +E  G    L ++T L+       R +   SI
Sbjct: 64  SVVDFTRLLTA-IANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLALSI 122

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++ + G DP  + F ++++ F     + +A      M +SG  P    YNTLI     
Sbjct: 123 LGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCK 182

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G    +++LL+ M ++G +  +L TYN L+   C      +A  ++  M    + PDV 
Sbjct: 183 NGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVF 242

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           T+  +  A+ + G  D+A+E+  +M  + + PN  T   +I+G C  G++  A +    M
Sbjct: 243 TFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLM 302

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMD-RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
              G  PN+V +N LI GF +     DG+     + +E  V  D  TY+T+++ +   G 
Sbjct: 303 ASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVG-DTFTYNTLIHGYCQVGK 361

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +   K+IF  M   G+ PD   + IL  G     E   A      M     +  +V +  
Sbjct: 362 LRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNI 421

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G C    ++ A E+F ++   GV P+ +T+  ++ G  +      A+E+ + MK  G
Sbjct: 422 MIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDG 481

Query: 489 VHPQ 492
           +  Q
Sbjct: 482 IICQ 485



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/374 (21%), Positives = 176/374 (47%), Gaps = 5/374 (1%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
            ++A   F +M +S   P+   +  ++       K +  + L   M   G +  +L ++ 
Sbjct: 596 FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLG-ISHDLYSFT 654

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +L+  +C     + A  ++ KM   G +P +VT  ++   + Q     +A  ++  M   
Sbjct: 655 ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G++PN      +I+G CK   +  AL     M++ G+  + V +N LI G          
Sbjct: 715 GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
             +L  M + +++P+VI ++ +++ +   G + + K ++ +M +  + P+   Y+ L  G
Sbjct: 775 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           +  +     A+ +   M+  G  P+VV + T+I+G+C    ++  +++F +M   G+  +
Sbjct: 835 FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
             T+ TL+ GY +A +   A+++   M   GV P   T+ +L +     G  ++A  ++ 
Sbjct: 895 AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVE 954

Query: 518 KIKNKERTNEMEAE 531
            ++     N+M+ +
Sbjct: 955 DLQK----NQMDVD 964



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/261 (28%), Positives = 124/261 (47%), Gaps = 13/261 (4%)

Query: 66  KESCRTVRSMTK------------LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTL 113
           +++ R +R MTK            L+++ +++G   EAQ ++  +++    P+ VTY +L
Sbjct: 223 RQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSL 282

Query: 114 LAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL 173
           +  L +  R          +   G  P+ + +N +IN F +S  +E+ M  F +M   GL
Sbjct: 283 INGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGL 342

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
              T TYNTLI GY   GK   +  +   M   G V P++ T+ +L+   C    I  A 
Sbjct: 343 VGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCG-VTPDIITHCILLHGLCVNGEIGSAM 401

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
              + M +      +V YN +     +  + ++A E+   +   GV+P+ RT  I+I G 
Sbjct: 402 VKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGL 461

Query: 294 CKEGKIKEALRFARTMKEYGV 314
           CK G  +EA    R MKE G+
Sbjct: 462 CKNGPRREADELFRRMKEDGI 482



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/252 (23%), Positives = 118/252 (46%), Gaps = 17/252 (6%)

Query: 34   AKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQA 93
             K+ N  E K LY         P               + +   L+N    +G+  +A+ 
Sbjct: 801  VKEGNLLEAKNLYKEMIRRSVHPN--------------ILTYNSLINGFCIQGRLGDAKH 846

Query: 94   IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
            +F+ ++  G  P +VTY TL+      KR      +  ++   G+  D+  +N +I+ + 
Sbjct: 847  MFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYC 906

Query: 154  ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKPN 212
            ++G +  A   F +M + G+ P   TYN L+      GK E+++ ++ DL   + +V  +
Sbjct: 907  QAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDV--D 964

Query: 213  LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
            + TYN++++  C    + EAW +   +   G+K D + Y T+ +   +NG   +A+++  
Sbjct: 965  IITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCT 1024

Query: 273  EMEHNGVQPNGR 284
             M+ +G  P+ R
Sbjct: 1025 RMKEDGFMPSER 1036



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 50/270 (18%), Positives = 116/270 (42%), Gaps = 1/270 (0%)

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           + T +  +   + A ++ +EM  +   P+      +++      + +  + F++ M+ +G
Sbjct: 36  LRTGFLHSIRFEDALDLFLEMVQSQPLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFG 95

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           +  +L  F +LI  F           +L  M +   +P ++T+ ++++ +     +    
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG-FHPNVVIFTTIISG 432
            +   M K+G +P+   Y+ L     +  +   A ELL  M + G    ++V + T+++G
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G   +A  +   M +  ++P++ TF  L+  + +      A+E+ + M    + P 
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN 275

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             T+  L       G    AK+    + +K
Sbjct: 276 TVTYNSLINGLCMHGRLYHAKKTFDLMASK 305


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 220/485 (45%), Gaps = 44/485 (9%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ--KRFNSIHSIMS 131
           S   ++NS    G    A  +F  + E G KP++  Y  LL AL  +   +F+ I ++  
Sbjct: 110 SFICVLNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYE 169

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   GM+P+   +N ++ A  ++G ++ A     +M + G  P   +Y T++      G
Sbjct: 170 NMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDG 229

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + EE+ ++      EG V       N L+   C E  + E + +M +M  +G+ P+VV+Y
Sbjct: 230 RVEEAREVARRFGAEGVVS----VCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSY 285

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +++ +  +  GE + A  V+ +M   G +PN  T   ++ GY   G++ E +   R M  
Sbjct: 286 SSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVL 345

Query: 312 YGVHPNLVIFNLLIKGFVEIMD-RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            GV PN+V++N L+ G     +  + VD    + K+    P+V TYST+++ +  AG + 
Sbjct: 346 EGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQ 405

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              E+++ M   G++P+   Y+ +     +    ++A  L+  M   G  P VV F T I
Sbjct: 406 GASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFI 465

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSP---------------------------------- 456
            G C  G +  A+ V D+M  +G  P                                  
Sbjct: 466 KGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVE 525

Query: 457 -NLKTFETLMWGY-SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            NL T+ T+M+G+ S  ++ W   ++L  M   GV P   T  ++  A    G  + A +
Sbjct: 526 LNLVTYNTVMYGFSSHGKEEW-VLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQ 584

Query: 515 ILSKI 519
            L +I
Sbjct: 585 FLDRI 589



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 121/472 (25%), Positives = 215/472 (45%), Gaps = 43/472 (9%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           Q  Q + N L     K + +TY  ++  L      +++H I+ Q++   +      F  V
Sbjct: 58  QHFQYLTNTL---AFKHTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICV 114

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG-YGIAGKPEESVKLLDLMSREG 207
           +N++  SG  + A+  F+++KE G  PT   YN L+    G +G     +  +    R  
Sbjct: 115 LNSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGE 174

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
            ++PN+ TYNVL++A C    +  A  ++ +M+  G  PD V+Y T+  A  ++G  ++A
Sbjct: 175 GMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEA 234

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK- 326
            EV       GV      C  +I G C+EG++ E       M   GV PN+V ++ +I  
Sbjct: 235 REVARRFGAEGVVS---VCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISW 291

Query: 327 ----GFVEI-------MDRDG----VDEVLALMKEF-------------------RVNPD 352
               G VE+       M R G    V    +LMK +                    V P+
Sbjct: 292 LSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPN 351

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGK-AGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           V+ Y+T++N    +G + +  ++   M K    +P+   YS L  G+V+  + + A E+ 
Sbjct: 352 VVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVW 411

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M+  G  PNVV++T+++   C +   D+A  + D M   G  P + TF T + G    
Sbjct: 412 NKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCG 471

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
            +   A  ++  M+ +G  P   T+  L +   +    KEA  ++ +++ ++
Sbjct: 472 GRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERK 523



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 206/432 (47%), Gaps = 41/432 (9%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T ++ ++ E G+ +EA+ +       G +  +     L+  L  + R   +  +M ++
Sbjct: 217 SYTTVVAAMCEDGRVEEAREVARRF---GAEGVVSVCNALICGLCREGRVGEVFGLMDEM 273

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             NG+DP+ + +++VI+  S+ G +E A+    KM   G  P   T+++L+KGY + G+ 
Sbjct: 274 VGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRV 333

Query: 194 EESVKLLDLMSREG---NV--------------------------------KPNLRTYNV 218
            E V L  +M  EG   NV                                +PN+ TY+ 
Sbjct: 334 GEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYST 393

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           LV  +    ++  A  V +KM   G++P+VV Y ++     +N   DQA  +I  M  +G
Sbjct: 394 LVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDG 453

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
             P   T    I G C  G++  A+R    M+ YG  P+   +N L+ G   + +     
Sbjct: 454 CPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEAC 513

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           E++  ++E +V  +++TY+T+M  +S+ G  +   ++   M   G+KPDA   +++   Y
Sbjct: 514 ELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAY 573

Query: 399 VREQEPEKAEELLMTMIESG--FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
            +  +   A + L   I +G    P+++  T+++ G C+   ++ AI   +KM   G+ P
Sbjct: 574 SKLGKVRTAIQFL-DRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFP 632

Query: 457 NLKTFETLMWGY 468
           N+ T++ L+ G+
Sbjct: 633 NIATWDVLVRGF 644



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 182/385 (47%), Gaps = 5/385 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + +++ L + G+ + A A+   +I  G +P++ T+++L+    +  R      +  
Sbjct: 282 VVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWR 341

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLIKGYGIA 190
            +   G+ P+ + +N ++N    SGN+ EA+D   +M K+    P  +TY+TL+ G+  A
Sbjct: 342 VMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKA 401

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  + + ++ + M   G V+PN+  Y  +V   C      +A+ ++  MA  G  P VVT
Sbjct: 402 GDLQGASEVWNKMVNCG-VRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVT 460

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +NT        G    A  V+ +M+  G  P+ RT   ++ G     ++KEA    R ++
Sbjct: 461 FNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELE 520

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E  V  NLV +N ++ GF      + V +VL  M    V PD IT + ++ A+S  G + 
Sbjct: 521 ERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVR 580

Query: 371 KCKEIFDDMGKAG--IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
              +  D +  AG  + PD  A++ L  G       E+A   L  M+  G  PN+  +  
Sbjct: 581 TAIQFLDRI-TAGKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDV 639

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHG 453
           ++ G+         I + D +   G
Sbjct: 640 LVRGFFKKLGHMGPIRILDDILGKG 664



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 71/285 (24%), Positives = 138/285 (48%), Gaps = 17/285 (5%)

Query: 69  CR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIH 127
           CR  V + + L++  ++ G  Q A  ++N ++  G +P++V YT+++  L     F+  +
Sbjct: 384 CRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAY 443

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            ++  +  +G  P  + FN  I      G +  AM    +M+  G  P T TYN L+ G 
Sbjct: 444 RLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGL 503

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
               + +E+ +L+  +  E  V+ NL TYN ++  + +         V+ +M  +G+KPD
Sbjct: 504 FSVNELKEACELIRELE-ERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPD 562

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS------GYCKEGKIKE 301
            +T N +  AY++ G+   A + +     + +      C  II+      G C    I+E
Sbjct: 563 AITVNVVIYAYSKLGKVRTAIQFL-----DRITAGKELCPDIIAHTSLLWGICNSLGIEE 617

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG----VDEVLA 342
           A+ +   M   G+ PN+  +++L++GF + +   G    +D++L 
Sbjct: 618 AIVYLNKMLNKGIFPNIATWDVLVRGFFKKLGHMGPIRILDDILG 662


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 207/422 (49%), Gaps = 9/422 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++++   +++ L + GK   A   F   +      S  T++ L+  L         HS+ 
Sbjct: 189 SLKTHNLVLHGLCKSGKVLAAMDHFEA-VRRSMPVSAATFSILINGLVKAGMMIQAHSLA 247

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            +   NG   D   + A++N  +++  ++EA+    K+  +G TPT +TYN L+ G    
Sbjct: 248 QETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKM 307

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ EE++ LL  +   G   P++ TY  L+     EK   EA+ +  +MA+ G+  D V 
Sbjct: 308 GRLEEAIDLLRKIVDNG-CTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVC 366

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  +     Q G+  QA  V   M  +G  P+  T   +I G  K G+I  A+R  ++M+
Sbjct: 367 YTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSME 426

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ PN V+++ LI G  +    D   E+LA MK+    PD ITY+ +++    +G ++
Sbjct: 427 ARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVE 486

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             +  FD+M +AG KPD + Y+IL  G  +    + A  +L  M  S F     ++++++
Sbjct: 487 AARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLV 541

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV- 489
            G C  G ++    +F +M   GV+ N +T   L++   +A +   A  +   ++  G+ 
Sbjct: 542 DGLCKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP 600

Query: 490 HP 491
           HP
Sbjct: 601 HP 602



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 102/402 (25%), Positives = 190/402 (47%), Gaps = 3/402 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   L++      + +EA  +  N +    +P + T+  L+    + +      +++
Sbjct: 118 SVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVI 177

Query: 131 SQVEEN-GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
            ++EE+ G+ P     N V++   +SG +  AMD F  ++ S +  + +T++ LI G   
Sbjct: 178 REMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRS-MPVSAATFSILINGLVK 236

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           AG   ++  L    +  G    ++ TY  +V      K I EA  +M K+ A+G  P + 
Sbjct: 237 AGMMIQAHSLAQETTTNG-CTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIA 295

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN +     + G  ++A +++ ++  NG  P+  T   +I G  KE +  EA +  + M
Sbjct: 296 TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 355

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G+  + V +  LI+G ++         V   M      PDV+T ST+++  S AG +
Sbjct: 356 ASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRI 415

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
                IF  M   G+ P+   YS L  G  + ++ + A E+L  M ++   P+ + +  +
Sbjct: 416 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNIL 475

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
           I G C  G ++ A   FD+M E G  P++ T+  L+ G  +A
Sbjct: 476 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKA 517



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 176/377 (46%), Gaps = 7/377 (1%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           NA+++ F+ +    EA +       +   P   T+N LI GY +A +PEE+  ++  M  
Sbjct: 123 NALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVIREMEE 182

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +  V P+L+T+N+++   C    +  A +    +  S M     T++ +     + G   
Sbjct: 183 DFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRS-MPVSAATFSILINGLVKAGMMI 241

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           QA  +  E   NG   +  T   I++   K  KI+EA+     +   G  P +  +N L+
Sbjct: 242 QAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALL 301

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            G  + M R  ++E + L+++   N   PDV+TY+++++         +  ++F +M   
Sbjct: 302 NGLCK-MGR--LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASR 358

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+  D   Y+ L +G ++  +  +A  +  TM   G  P+VV  +T+I G    G +  A
Sbjct: 359 GLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAA 418

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           + +F  M   G++PN   +  L+ G  +AR+   A E+L  MK     P   T+ +L + 
Sbjct: 419 VRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDG 478

Query: 503 RRATGLTKEAKRILSKI 519
              +G  + A+    ++
Sbjct: 479 LCKSGDVEAARAFFDEM 495



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 159/328 (48%), Gaps = 13/328 (3%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L+  L++ GK  +A +++  +   G  P +VT +T++  L+   R  +   I   +E 
Sbjct: 368 TALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEA 427

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ P+ + ++A+I+   ++  M+ A++   +MK++  TP T TYN LI G   +G  E 
Sbjct: 428 RGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEA 487

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +    D M  E   KP++ TYN+L+   C   N   A  V+  M++S        Y+++ 
Sbjct: 488 ARAFFDEM-LEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSRF-----VYSSLV 541

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               ++G+ +    +  EME +GV  N +T   +I   CK  ++ EA+     +++ G+ 
Sbjct: 542 DGLCKSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGM- 599

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV--NPDVITYSTIMNAWSTAGFMDKCK 373
           P+   +N +I   ++      V+E  A+ +E      PD +TY+ ++N    A  MD+  
Sbjct: 600 PHPYAYNSIISALIK---SGKVNEGQAVYQEMTRWWKPDRVTYNALLNGMIGANRMDRAH 656

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             + +M   G  P       LA   +++
Sbjct: 657 YYYLEMTGRGYVPPVSILHKLADDRLKD 684



 Score =  102 bits (254), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 148/315 (46%), Gaps = 8/315 (2%)

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           ++ T N L+  +   K   EA N++    A+  +PDV T+N + T Y    E ++A  VI
Sbjct: 118 SVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEAFAVI 177

Query: 272 VEMEHN-GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
            EME + GV P+ +T  +++ G CK GK+  A+     ++   +  +   F++LI G V+
Sbjct: 178 REMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRR-SMPVSAATFSILINGLVK 236

Query: 331 IMDRDGVDEVLALMKEFRVNP---DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
                 + +  +L +E   N    D+ TY+ I+N  +    + +   + + +   G  P 
Sbjct: 237 A---GMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPT 293

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ L  G  +    E+A +LL  ++++G  P+VV +T++I G   +     A ++F 
Sbjct: 294 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 353

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           +M   G++ +   +  L+ G  +  +  +A  + + M + G  P   T   + +     G
Sbjct: 354 EMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 413

Query: 508 LTKEAKRILSKIKNK 522
               A RI   ++ +
Sbjct: 414 RIGAAVRIFKSMEAR 428



 Score = 39.7 bits (91), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 26/120 (21%), Positives = 55/120 (45%), Gaps = 2/120 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M +      ++ T+L+  L +  +  EA ++FN + + G  P    Y ++++AL    + 
Sbjct: 560 MERSGVANSQTRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPHPYAYNSIISALIKSGKV 618

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           N   ++  ++      PD + +NA++N    +  M+ A   + +M   G  P  S  + L
Sbjct: 619 NEGQAVYQEMTR-WWKPDRVTYNALLNGMIGANRMDRAHYYYLEMTGRGYVPPVSILHKL 677


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 110/473 (23%), Positives = 228/473 (48%), Gaps = 5/473 (1%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A  +F  +++    PS+V +  LL+A+   K+++ + S+  ++E  G+  D   FN
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDLYTFN 124

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            VIN F     +  A+    KM + G  P   T  +L+ G+    +  ++V L+D M   
Sbjct: 125 IVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEI 184

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G  +P++  YN ++ + C  + + +A +   ++   G++P+VVTY  +      +G  + 
Sbjct: 185 G-YRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRWND 243

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A  ++ +M    + PN  T   ++  + K GK+ EA      M    + P++V ++ LI 
Sbjct: 244 AARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSLIN 303

Query: 327 GFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           G   + DR D  +++  LM      PDV++Y+T++N +  A  ++   ++F  M + G+ 
Sbjct: 304 GLC-LHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGLV 362

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
            +   Y+ L +G+ +  + +KA+E    M   G  P++  +  ++ G C +G +++A+ +
Sbjct: 363 NNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALVI 422

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F+ M +  +  ++ T+ T++ G  +  +   A  +   +   G+ P   T+  +      
Sbjct: 423 FEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLCT 482

Query: 506 TGLTKEAKRILSKIKNK--ERTNEMEAEEDIPVESLERLYHKEATTASYPNLL 556
            GL  E + + +K+K +   + + M    D  +     L  K  +    P+LL
Sbjct: 483 KGLQHEVEALYTKMKQEGLMKNDSMLCLGDGDITISAELIKKMLSCGYAPSLL 535


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 213/426 (50%), Gaps = 14/426 (3%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++L  R    +A + FN++     +P+L TYT L+  L    +      +  ++   G
Sbjct: 169 ILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKG 228

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD I ++++I+  S++G ++EA      M   G  PT   Y +++ G    G+ +E+V
Sbjct: 229 YKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAV 288

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K +  M R   ++P + TY+ +V  +     + +A+ VM +MA     PD ++Y     A
Sbjct: 289 KTIQEMRRR-RLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEA 347

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G  ++AE+V   M   G +P+  T GIII  +CKEG +  A    R M +  V PN
Sbjct: 348 LYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPN 407

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKE 374
             I+ +++ GFV+      ++E L L +      + P  +TY+T++NA      MD+  E
Sbjct: 408 RYIYTMIMDGFVK---SSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALE 464

Query: 375 IFDDMG--KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           +  +M   K  ++P    YS++  G  +    E+A +LL  MI++G  P+   +T++I  
Sbjct: 465 LLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQT 524

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL--MWGYSEARQPWRAEEILQIMKAFGVH 490
               G + RA+E+ ++M + G+ P+  T+ TL  +   S+    W   ++LQ M   G  
Sbjct: 525 LAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCRSDVDAAW---DLLQEMMRNGHT 581

Query: 491 PQKSTF 496
           P + TF
Sbjct: 582 PNEFTF 587



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/420 (22%), Positives = 202/420 (48%), Gaps = 6/420 (1%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G   +L T  +LL AL    R   +   +   + +  +P+   FN ++  F+   + E  
Sbjct: 91  GFSHTLFTRNSLLLALV---RGGHLSDALGFFQSSISEPNVSSFNILLRGFAARDDFEVV 147

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
                +MK  G+T   +T+  ++         +++V   + +S     +P L TY VLV 
Sbjct: 148 NALLREMKSRGITSNGATHGVILSALCARRDLDKAVSYFNSVS-PNKCEPTLFTYTVLVD 206

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C    +  A +V  +M   G KPD++ Y+++    ++ G  D+A +++  M   G  P
Sbjct: 207 GLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPP 266

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
                  I++G CK G+I+EA++  + M+   + P +  ++ ++ G++ +   +    V+
Sbjct: 267 TAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVM 326

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M +    PD I+Y+  + A  + G  ++ +++F+ M + G KPD H Y I+   + +E
Sbjct: 327 EEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKE 386

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
                A  +L  M ++   PN  I+T I+ G+     ++ A+E++ ++ + G+ P+  T+
Sbjct: 387 GSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTY 446

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFG--VHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            T++    + ++   A E+L+ M+     + P   T+ ++       G+ + A  +L+++
Sbjct: 447 NTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEM 506



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 136/262 (51%), Gaps = 2/262 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T  + +L   G+ +EA+ +F  ++E G KP + TY  ++     +    +   ++  +
Sbjct: 340 SYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLM 399

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++  + P+   +  +++ F +S  +EEA++ + ++ + G+ P+T TYNT+I       K 
Sbjct: 400 DKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKM 459

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
           +E+++LL ++  R+  ++P++ TY++++           A++++ +M  +G+ PD  TY 
Sbjct: 460 DEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYT 519

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++    A  G+  +A E++ EM   G+ P+  T G ++   C+   +  A    + M   
Sbjct: 520 SLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQILCR-SDVDAAWDLLQEMMRN 578

Query: 313 GVHPNLVIFNLLIKGFVEIMDR 334
           G  PN   F  + KGF   +DR
Sbjct: 579 GHTPNEFTFKAVEKGFRLQLDR 600


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 227/488 (46%), Gaps = 41/488 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++   +G   +A A  + +   G  P  VTY TLL A   +       +++++++ +G
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P    +N +++AF+  G +++A      M   G  P   TYN L  G   AGK +E+ 
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAF 333

Query: 198 KLLDLMSR-----------------------------------EGNVKPNLRTYNVLVRA 222
           +L D M R                                   +  VKP L T+N++V++
Sbjct: 334 RLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKS 393

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C E  + EA   + K+A  G+ PDV+TYNT+  AY + G   +A  ++ EM   G++ +
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   ++   CK  + ++A     +  + G  P+ V +  ++  + +  + +    +  
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWD 513

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG---KAGIKPDAHAYSILAKGYV 399
            M E ++ P + TY+T++        M++ KE  D +    + G+ PD   Y+I+   Y 
Sbjct: 514 QMIERKLIPSISTYNTLIKGLCR---MERLKEAIDKLNELVEKGLVPDETTYNIIIHAYC 570

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +E + E A      M+E+ F P+VV   T+++G C  G +D+A+++F+   E G   ++ 
Sbjct: 571 KEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVI 630

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+ TL+    +      A      M+  G+ P   T+ ++  A    G ++EA  +L K+
Sbjct: 631 TYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKL 690

Query: 520 KNKERTNE 527
            +  + ++
Sbjct: 691 ADSGKLSQ 698



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 211/450 (46%), Gaps = 49/450 (10%)

Query: 115 AALTIQKRFNSIHS----IMSQVEENGMDPDSIFFNAVINAFSESGNM--EEAMDTFWKM 168
           AAL+   R    H     + S     G+ P     NAV++A S S +   + ++D F  +
Sbjct: 140 AALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSL 199

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
            E  L P   T+N L+  +   G   +++  L  M   G + P+  TYN L+ A C +  
Sbjct: 200 IELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFG-LSPDAVTYNTLLNAHCRKGM 258

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           + EA  ++ +M   G+ P   TYNT+ +A+A+ G   QA +V+  M   G +P+ RT  +
Sbjct: 259 LGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNV 318

Query: 289 IISGYCKEGKIKE------------------------------------ALRFARTMKEY 312
           +  G C+ GK+ E                                    ALR    M++ 
Sbjct: 319 LAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDK 378

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFM 369
           GV P LV  N+++K   +      ++E L  +++     + PDVITY+T+++A+  AG +
Sbjct: 379 GVKPTLVTHNIVVKSLCK---EGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNV 435

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            K   + D+M   G+K D    + +     + +  E AEELL +  + GF P+ V + T+
Sbjct: 436 AKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTV 495

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           ++ +  + + + A+ ++D+M E  + P++ T+ TL+ G     +   A + L  +   G+
Sbjct: 496 MAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGL 555

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            P ++T+ ++  A    G  + A R  +K+
Sbjct: 556 VPDETTYNIIIHAYCKEGDLENAFRFHNKM 585



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 99/399 (24%), Positives = 184/399 (46%), Gaps = 18/399 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ SL + GK +EA      + E G  P ++TY TL+ A           ++M ++   G
Sbjct: 390 VVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKG 449

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D+   N V+    +    E+A +      + G  P   +Y T++  Y     PE ++
Sbjct: 450 LKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPAL 509

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L D M  E  + P++ TYN L++  C  + + EA + ++++   G+ PD  TYN I  A
Sbjct: 510 RLWDQMI-ERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIHA 568

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G+ + A     +M  N  +P+  TC  +++G C  GK+ +AL+   +  E G   +
Sbjct: 569 YCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVD 628

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ +N LI+   ++ D D        M+   + PD  TY+ +++A S AG  ++   +  
Sbjct: 629 VITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLH 688

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQ---------EPEKAEELLMTMIESGFHPNVVIFTT 428
            +  +G    + A  +L      E          E E +E+     +E+        +  
Sbjct: 689 KLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALET--------YME 740

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            ++G C+ G +  A  V D+M + G+  +  T+ TLM G
Sbjct: 741 RLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEG 779



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 176/364 (48%), Gaps = 11/364 (3%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKES-GLTPTTSTYNTLIKGYGIAGK--PEES 196
           P S   +A ++A++       A      ++   G+ P+    N ++     +    P+ S
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           + +   +  E  + PN  T+N+LV   C++  + +A   +  M   G+ PD VTYNT+  
Sbjct: 193 LDVFRSLI-ELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLN 251

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A+ + G   +A  ++  M+ +G+ P   T   ++S + + G IK+A +   +M  YG  P
Sbjct: 252 AHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEP 311

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEF-RVN---PDVITYSTIMNAWSTAGFMDKC 372
           +L  +N+L  G  +      VDE   L  E  R++   PDV+TY+T+++A          
Sbjct: 312 DLRTYNVLAVGLCQA---GKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDA 368

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             + ++M   G+KP    ++I+ K   +E + E+A   L  + E G  P+V+ + T+I  
Sbjct: 369 LRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDA 428

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C  G++ +A  + D+M   G+  +  T  T+++   + ++   AEE+L      G  P 
Sbjct: 429 YCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPD 488

Query: 493 KSTF 496
           + ++
Sbjct: 489 EVSY 492



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 165/364 (45%), Gaps = 41/364 (11%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++  + G   +A  + + ++  G K    T  T+L  L   KR+     ++    + G
Sbjct: 425 LIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRG 484

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PD + +  V+ A+ +  N E A+  + +M E  L P+ STYNTLIKG     + +E++
Sbjct: 485 FVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAI 544

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             L+ +  +G V P+  TYN+++ A+C E ++  A+   +KM  +  KPDVVT NT+   
Sbjct: 545 DKLNELVEKGLV-PDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNG 603

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
              +G+ D+A ++       G + +  T   +I   CK G +  AL F   M+  G+ P+
Sbjct: 604 LCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPD 663

Query: 318 LVIFNLLIKGFVE---------------------------IMDRDGVDEVLALMKEFRVN 350
              +N+++    E                           ++     DE  A +KE    
Sbjct: 664 AFTYNVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADE--ADVKEHEGK 721

Query: 351 PD-----------VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           P+           + TY   +N   T G + + K + D+M + G+  D+  Y  L +G +
Sbjct: 722 PEAESSEKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLI 781

Query: 400 REQE 403
           + Q+
Sbjct: 782 KRQK 785



 Score =  112 bits (279), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 73/327 (22%), Positives = 144/327 (44%), Gaps = 5/327 (1%)

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE--A 232
           PT+   +  +  Y     P  + +LL  + R   V+P+L+  N ++ A     +     +
Sbjct: 133 PTSPLADAALSAYARLRLPHLAAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQAS 192

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
            +V   +    + P+  T+N +   +   G    A   +  M+  G+ P+  T   +++ 
Sbjct: 193 LDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNA 252

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
           +C++G + EA      MK  G+ P    +N L+  F  +       +V+  M  +   PD
Sbjct: 253 HCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPD 312

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK-PDAHAYSILAKGYVREQEPEKAEELL 411
           + TY+ +      AG +D+   + D+M +     PD   Y+ L     + +    A  LL
Sbjct: 313 LRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLL 372

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M + G  P +V    ++   C +G ++ A+   +K+ E G++P++ T+ TL+  Y +A
Sbjct: 373 EEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKA 432

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLL 498
               +A  ++  M   G+  +  TF L
Sbjct: 433 GNVAKAFTLMDEMVGKGL--KMDTFTL 457



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 67/293 (22%), Positives = 135/293 (46%), Gaps = 37/293 (12%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +M +  +   P+ A  +++ +IE    PS+ TY TL+  L   +R       ++++ E G
Sbjct: 495 VMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKG 554

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N +I+A+ + G++E A     KM E+   P   T NTL+ G  + GK ++++
Sbjct: 555 LVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKAL 614

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL +    +G  K ++ TYN L+++ C   ++  A +    M   G++PD  TYN + +A
Sbjct: 615 KLFESWVEKGK-KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSA 673

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGII---------------------------- 289
            ++ G +++A  ++ ++  +G       C ++                            
Sbjct: 674 LSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDN 733

Query: 290 --------ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
                   ++G C  G++KEA      M + G+  +   +  L++G ++   R
Sbjct: 734 ALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQKR 786


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 205/411 (49%), Gaps = 9/411 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           L+  L    K ++A  +F  L+ E   +P+ V Y T++  L  +        ++  +E+ 
Sbjct: 148 LLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQG 207

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
              P++  ++ VI+AF + G ++ A     +MK+  + P   TY+TLI       +  E+
Sbjct: 208 STKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ-WEN 266

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           V+ L L     N+ PN+ T+N ++   C E  + +A  +M  M   G+ PDV+TYN I  
Sbjct: 267 VRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIID 326

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y   G+ D+A E+   M +  ++PN  +  I+I+GY ++ KI EA++  R + + G+ P
Sbjct: 327 GYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKP 386

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           ++V  N+L+ G  E+            M      PD+ T+ T++  +   G +++    F
Sbjct: 387 SIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHF 446

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             + +     +   Y+ +  G  +  + +KA      +   G HP+V+ +T +ISG+C +
Sbjct: 447 HKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQE 506

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           G +D A ++  KM ++G   + +T+  ++ G+       R+ ++ + MKAF
Sbjct: 507 GLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF------LRSNKVSE-MKAF 550



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 103/468 (22%), Positives = 222/468 (47%), Gaps = 37/468 (7%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE-------------- 135
           +A ++F  ++     PS+V+++ LL AL   K ++S+ S+  ++ +              
Sbjct: 55  DAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVV 114

Query: 136 ---------------------NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM-KESGL 173
                                 G+  + + FN ++        +++A+  F K+ +E+  
Sbjct: 115 NSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENIC 174

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
            P    Y T++ G    G  +++  LL LM  +G+ KPN   Y++++ A+C +  +  A 
Sbjct: 175 EPNEVMYGTVMNGLCKKGHTQKAFDLLRLME-QGSTKPNTCIYSIVIDAFCKDGMLDGAT 233

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
           +++++M    + PD+ TY+T+  A  +  + +    + +EM H  + PN  T   +I G 
Sbjct: 234 SLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGL 293

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           CKEGK+++A    R M E GV P+++ +N++I G+      D   E+   M    + P++
Sbjct: 294 CKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNI 353

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           I+Y+ ++N ++    +D+  ++  ++ + G+KP     ++L  G       + A+     
Sbjct: 354 ISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDE 413

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M+ +G  P++    T++ G+  +G ++ A+  F K+       N++ +  ++ G  +  +
Sbjct: 414 MLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGK 473

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             +A    + +   G+HP   T+  +       GL  EAK +L K+++
Sbjct: 474 LDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMED 521



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 82/334 (24%), Positives = 169/334 (50%), Gaps = 1/334 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++  + G    A ++ N + +    P + TY+TL+ AL    ++ ++ ++  ++    
Sbjct: 219 VIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLN 278

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   FN+VI+   + G +E+A +    M E G+ P   TYN +I GYG+ G+ + + 
Sbjct: 279 IYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAR 338

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++ D M  + +++PN+ +YN+L+  +  +K I EA  V  +++  G+KP +VT N +   
Sbjct: 339 EIFDSMINK-SIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHG 397

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G    A+    EM   G  P+  T   ++ GY K G ++EA+     ++      N
Sbjct: 398 LFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTN 457

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           + I+  +I G  +    D        +    ++PDVITY+ +++ +   G +D+ K++  
Sbjct: 458 IQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLR 517

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
            M   G   D   Y+++ +G++R  +  + +  L
Sbjct: 518 KMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFL 551



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 1/211 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +NK     + S   L+N    + K  EA  +   + + G KPS+VT   LL  L    R 
Sbjct: 345 INKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRT 404

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            S  +   ++   G  PD      ++  + ++G +EEAM  F K++          Y  +
Sbjct: 405 KSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAV 464

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G    GK +++    + +   G + P++ TY  ++  +C E  + EA +++ KM  +G
Sbjct: 465 IDGLCKNGKLDKAHATFEKLPLIG-LHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNG 523

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
              D  TYN I   + ++ +  + +  + E+
Sbjct: 524 CLADNRTYNVIVRGFLRSNKVSEMKAFLEEI 554


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 196/395 (49%), Gaps = 1/395 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T +++ L  + +   A      ++    KP+    T L++ L    + +    +  ++
Sbjct: 374 TFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRL 433

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E G   +++  NA+I+   E+G+ EEA     +M E GL   + +YNTLI      GK 
Sbjct: 434 LEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKV 493

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           EE  KL + M R G ++P++ TYN+L+   CN   I EA  + H+   +G  PD  TY  
Sbjct: 494 EEGFKLKEEMVRRG-IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGI 552

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y +    ++ E++  EM    ++ N    G +I  YC+ G ++EA R    M+  G
Sbjct: 553 MIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRG 612

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           +      ++ LI G   I   D  +++L  M++  ++P+V+ Y+ ++  +   G M K  
Sbjct: 613 IPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVD 672

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            I  +M    + P+   Y+I+  G+ +    + A +LL  M + G  P+ V +  + +G+
Sbjct: 673 SILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGF 732

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
           C +G M+ A++V D M   G+S +  T+ TL+ G+
Sbjct: 733 CKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGW 767



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 225/488 (46%), Gaps = 40/488 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++ L + G+  EA      + +   KPSLVTY  L+  L   +RF+  + I+ 
Sbjct: 232 VVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCILK 291

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G  P+++ +N +I+ +   GN+  A+     M  +G++P + T N+LI+GY  + 
Sbjct: 292 EMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSN 351

Query: 192 KPEESVKLLDLMSREG----------------------------------NVKPNLRTYN 217
           + E +  LL+ M   G                                  N KPN     
Sbjct: 352 QMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLT 411

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +LV   C     +EA  + +++   G   + VT N +     + G  ++A +++ EM   
Sbjct: 412 LLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLER 471

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G+  +  +   +I   CKEGK++E  +    M   G+ P++  +N+L+ G   + +   +
Sbjct: 472 GLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHG---LCNMGKI 528

Query: 338 DEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           +E   L  E + N   PD  TY  +++ +  A  +++ +++F +M    I+ +A  Y  L
Sbjct: 529 EEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTL 588

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            + Y       +A  L   M   G       ++++I G  + G +D A ++ D+M + G+
Sbjct: 589 IRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGL 648

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
           SPN+  +  L+ GY +  Q  + + ILQ M    VHP K T+ ++       G  K A +
Sbjct: 649 SPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAK 708

Query: 515 ILSKIKNK 522
           +L+++  K
Sbjct: 709 LLNEMAQK 716



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 119/509 (23%), Positives = 215/509 (42%), Gaps = 41/509 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L++  +  EA  I   + + G+ P+ V Y TL+         ++   I   +  NG
Sbjct: 273 LINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNG 332

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG------------------------- 172
           + P+S+  N++I  + +S  ME A     +M   G                         
Sbjct: 333 ISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSAL 392

Query: 173 ----------LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
                       P       L+ G    GK  E+++L   +  +G    N  T N L+  
Sbjct: 393 LFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKG-FAANTVTSNALIHG 451

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C   +  EA  ++ +M   G+  D ++YNT+  A  + G+ ++  ++  EM   G+QP+
Sbjct: 452 LCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPD 511

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T  +++ G C  GKI+EA       K+ G  P+   + ++I G+ +    +  +++  
Sbjct: 512 MYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQ 571

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M   ++  + + Y T++ A+   G M +   + DDM   GI   +  YS L  G     
Sbjct: 572 EMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIG 631

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             + A +LL  M + G  PNVV +T +I G+C  G M +   +  +M  + V PN  T+ 
Sbjct: 632 LVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYT 691

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            ++ G+ +      A ++L  M   G+ P   T+  L       G  +EA ++   +   
Sbjct: 692 IMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTG 751

Query: 523 ERTNEMEAEEDIPVESLERLYHKEATTAS 551
             +      +DI   +L   +HK  T +S
Sbjct: 752 GIS-----LDDITYTTLIDGWHKPLTVSS 775



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 185/424 (43%), Gaps = 61/424 (14%)

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAF--------SESGNMEEAMDTFWKMKES 171
           Q   NS+ SI+S    +      +  +   + F        S + N   A + F    E+
Sbjct: 57  QSLINSVFSILSNPSFDSSKSKQLLLHLSPHEFDQCFLAIGSNNVNPRTAFNFFHFASET 116

Query: 172 GLTPTTST---------YNTLIK--GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
              P  +          Y+T  K  G+G+        +L  L++ +G + P+L+T N L+
Sbjct: 117 LFEPAVAVTVVDLLIHVYSTQFKHLGFGVV------FELFSLLANKG-LFPSLKTCNFLL 169

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
            +      +  ++ V   M   G+ PDV  ++T+  A+   G  D A E+  +ME  GV 
Sbjct: 170 SSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRKMEKVGVA 229

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           PN  T   II G CK G++ EA +F   M++  V P+LV + +LI G V++   D  + +
Sbjct: 230 PNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLERFDEANCI 289

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L  M +    P+ + Y+T+++ +   G +    +I DDM   GI P++   + L +GY +
Sbjct: 290 LKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCK 349

Query: 401 EQEPEKAEELLMTMIESG-----------------------------------FHPNVVI 425
             + E AE LL  M+  G                                   F PN  +
Sbjct: 350 SNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGL 409

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
            T ++SG C +G    AIE++ ++ E G + N  T   L+ G  EA     A ++L+ M 
Sbjct: 410 LTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEML 469

Query: 486 AFGV 489
             G+
Sbjct: 470 ERGL 473



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 38/149 (25%), Positives = 74/149 (49%)

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+F  +   G+ P     + L    V+  E + + ++   M   G  P+V +F+T+++ +
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C+ G +D AIE+F KM + GV+PN+ T+  ++ G  +  +   A +  + M+   V P  
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNK 522
            T+ +L           EA  IL ++ ++
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDR 296


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 209/415 (50%), Gaps = 4/415 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LMN   +  +P  A +    +++ G +P +VT+T+L+    +  R     S+++Q+ E G
Sbjct: 113 LMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG 172

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +  +I++  ++G++  A+  F +M+  G+ P    Y +L+ G   +G+  ++ 
Sbjct: 173 IKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 232

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M++   +KP++ T+N L+ A+  E    +A  + ++M    + P++ TY ++   
Sbjct: 233 SLLRGMTKR-KIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLING 291

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           +   G  D+A ++   ME  G  P+      +I+G+CK  K+ +A++    M + G+  N
Sbjct: 292 FCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGN 351

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +  LI+GF ++   +   EV + M    V P++ TY+ +++     G + K   IF+
Sbjct: 352 TITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFE 411

Query: 378 DMGKA---GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           DM K    G+ P+   Y++L  G     + EKA  +   M +      ++ +T II G C
Sbjct: 412 DMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIITYTIIIQGMC 471

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             G +  A+ +F  +   GV PN+ T+ T++ G         A  + + MK  GV
Sbjct: 472 KAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLFRKMKEDGV 526



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 198/399 (49%), Gaps = 4/399 (1%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           EA  +F +++E    PS++ +T LL  +   K+F+ + ++   ++  G+  D    N ++
Sbjct: 55  EALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMGVSHDLYTCNLLM 114

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N F +S     A     KM + G  P   T+ +LI G+ +  + EE++ +++ M   G +
Sbjct: 115 NCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMG-I 173

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           KP++  Y  ++ + C   ++  A ++  +M   G++PDVV Y ++      +G    A+ 
Sbjct: 174 KPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADS 233

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           ++  M    ++P+  T   +I  + KEGK  +A      M    + PN+  +  LI GF 
Sbjct: 234 LLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFC 293

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
                D   ++  LM+     PDV+ Y++++N +     +D   +IF +M + G+  +  
Sbjct: 294 MEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTI 353

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+ L +G+ +  +P  A+E+   M+  G  PN+  +  ++   C +G + +A+ +F+ M
Sbjct: 354 TYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDM 413

Query: 450 CEH---GVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
            +    GV+PN+ T+  L+ G     +  +A  + + M+
Sbjct: 414 QKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMR 452



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 184/370 (49%), Gaps = 1/370 (0%)

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
            S    EA+D F  M ES   P+   +  L+       K +  + L D +   G V  +L
Sbjct: 49  HSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIMG-VSHDL 107

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            T N+L+  +C       A + + KM   G +PD+VT+ ++   +      ++A  ++ +
Sbjct: 108 YTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAMSMVNQ 167

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M   G++P+      II   CK G +  AL     M+ YG+ P++V++  L+ G      
Sbjct: 168 MVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGLCNSGR 227

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
               D +L  M + ++ PDVIT++ +++A+   G     +E++++M +  I P+   Y+ 
Sbjct: 228 WRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNIFTYTS 287

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L  G+  E   ++A ++   M   G  P+VV +T++I+G+C    +D A+++F +M + G
Sbjct: 288 LINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYEMSQKG 347

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           ++ N  T+ TL+ G+ +  +P  A+E+   M + GV P   T+ +L       G  K+A 
Sbjct: 348 LTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGKVKKAL 407

Query: 514 RILSKIKNKE 523
            I   ++ +E
Sbjct: 408 MIFEDMQKRE 417



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 189/390 (48%), Gaps = 10/390 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T L+N      + +EA ++ N ++E G KP +V YTT++ +L      N   S+  
Sbjct: 142 IVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFD 201

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+E  G+ PD + + +++N    SG   +A      M +  + P   T+N LI  +   G
Sbjct: 202 QMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEG 261

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  ++ +L + M R  ++ PN+ TY  L+  +C E  + EA  + + M   G  PDVV Y
Sbjct: 262 KFLDAEELYNEMIRM-SIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAY 320

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++   + +  + D A ++  EM   G+  N  T   +I G+ + GK   A      M  
Sbjct: 321 TSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVS 380

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR------VNPDVITYSTIMNAWST 365
            GV PN+  +N+L+           V + L + ++ +      V P++ TY+ +++    
Sbjct: 381 RGVPPNIRTYNVLLHCLCY---NGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCY 437

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G ++K   +F+DM K  +      Y+I+ +G  +  + + A  L  ++   G  PNVV 
Sbjct: 438 NGKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVT 497

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
           +TT+ISG   +G    A  +F KM E GVS
Sbjct: 498 YTTMISGLFREGLKHEAHVLFRKMKEDGVS 527


>gi|326528911|dbj|BAJ97477.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 913

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 205/427 (48%), Gaps = 36/427 (8%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           + Y+ ++ A       +    ++ ++EE+G+D     ++++++ ++   + ++ +  F +
Sbjct: 383 IIYSNIIHAHCQSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFER 442

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           +KE   TP+  +Y  LI  Y   GK  +++ +   M   G +K N +TY++L+  + +  
Sbjct: 443 LKECCFTPSIISYGCLINLYVKIGKVAKAIAISKEMESSG-IKHNNKTYSMLISGFIHLH 501

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           + T A+ +  +M  SG++PD   YN +  A+ + G  D+A  ++ +M+   +QP+ R   
Sbjct: 502 DFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFR 561

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
            II G+   G +K AL     M+  G  P ++ +N LI G +     +    VL  M   
Sbjct: 562 PIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIA 621

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH------------------ 389
            + P+  TY+ IM  ++  G + K  E F  + + G+K D +                  
Sbjct: 622 GITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSA 681

Query: 390 -----------------AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
                             Y+IL  G+ R  +  +A +L+  M E G  PN+  +T+ I+ 
Sbjct: 682 LAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINA 741

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G M RA  V D+M + G+ PNLKT+ TL+ G++ A  P RA +  + MK  G+ P 
Sbjct: 742 CCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPD 801

Query: 493 KSTFLLL 499
           ++ +  L
Sbjct: 802 EAAYHCL 808



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 95/334 (28%), Positives = 162/334 (48%), Gaps = 6/334 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           ++ + L++  I       A  IF  +++ G +P    Y  L+ A       +    I+ +
Sbjct: 488 KTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEK 547

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +++  M P +  F  +I  F+ +G+M+ A+D    M+ SG  PT  TYN LI G     +
Sbjct: 548 MQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQ 607

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            E +V +L+ MS  G + PN  TY +++R +    +I +A+    K+   G+K DV  Y 
Sbjct: 608 VERAVSVLNKMSIAG-ITPNEHTYTIIMRGYAATGDIAKAFEYFTKIKEGGLKLDVYIYE 666

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+  A  ++G    A  V  EM    +  N     I+I G+ + G + EA    + MKE 
Sbjct: 667 TLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKED 726

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           GV PN+  +   I    +  D      V+  M +  + P++ TY+T++  W+ A   D+ 
Sbjct: 727 GVPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDVGLKPNLKTYTTLIKGWARASLPDRA 786

Query: 373 KEIFDDMGKAGIKPDAHAY-----SILAKGYVRE 401
            + F++M  AG+KPD  AY     S+L++  V E
Sbjct: 787 LKCFEEMKLAGLKPDEAAYHCLVTSLLSRATVME 820



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 101/435 (23%), Positives = 201/435 (46%), Gaps = 47/435 (10%)

Query: 67  ESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           E+CR  R + +         +P++ QA+ +   E   KPS   +  ++     +   +  
Sbjct: 246 EACREFRRVVE--------SRPEDWQAVVSAF-ERIPKPSRREFGLMIVYYAKRGDKHHA 296

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
            +    +   G++P++  F ++++A++ + +M  A+    +MK  G+  T  TY+ LI G
Sbjct: 297 RATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCTEEMKAEGIELTIVTYSILISG 356

Query: 187 YGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           +G     + +  L  +  +  G++  N   Y+ ++ A C   N+  A  ++H+M   G+ 
Sbjct: 357 FGKINDTQSADNLFKEAKTNLGDL--NGIIYSNIIHAHCQSGNMDRAEELVHEMEEDGID 414

Query: 246 -----------------------------------PDVVTYNTIATAYAQNGEADQAEEV 270
                                              P +++Y  +   Y + G+  +A  +
Sbjct: 415 APIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYVKIGKVAKAIAI 474

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             EME +G++ N +T  ++ISG+        A R    M + G+ P+  I+NLLI+ F +
Sbjct: 475 SKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEMLKSGLQPDRAIYNLLIEAFCK 534

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           + + D    +L  M++ R+ P    +  I+  ++ AG M +  +I D M ++G  P    
Sbjct: 535 MGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALDILDLMRRSGCAPTVMT 594

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ L  G +R+ + E+A  +L  M  +G  PN   +T I+ G+ + G + +A E F K+ 
Sbjct: 595 YNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGDIAKAFEYFTKIK 654

Query: 451 EHGVSPNLKTFETLM 465
           E G+  ++  +ETL+
Sbjct: 655 EGGLKLDVYIYETLL 669



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 84/345 (24%), Positives = 161/345 (46%), Gaps = 1/345 (0%)

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P+   +  +I  Y   G    +    + M   G ++PN   +  LV A+   +++  A +
Sbjct: 275 PSRREFGLMIVYYAKRGDKHHARATFENMRARG-IEPNAFVFTSLVHAYAVARDMRGALS 333

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
              +M A G++  +VTY+ + + + +  +   A+ +  E + N    NG     II  +C
Sbjct: 334 CTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHC 393

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           + G +  A      M+E G+   +  ++ ++ G+  I D      V   +KE    P +I
Sbjct: 394 QSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSII 453

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           +Y  ++N +   G + K   I  +M  +GIK +   YS+L  G++   +   A  +   M
Sbjct: 454 SYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEM 513

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           ++SG  P+  I+  +I  +C  G+MDRAI + +KM +  + P+ + F  ++ G++ A   
Sbjct: 514 LKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDM 573

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            RA +IL +M+  G  P   T+  L          + A  +L+K+
Sbjct: 574 KRALDILDLMRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKM 618



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/280 (26%), Positives = 129/280 (46%), Gaps = 1/280 (0%)

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           KP    +  +   YA+ G+   A      M   G++PN      ++  Y     ++ AL 
Sbjct: 274 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 333

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               MK  G+   +V +++LI GF +I D    D +    K    + + I YS I++A  
Sbjct: 334 CTEEMKAEGIELTIVTYSILISGFGKINDTQSADNLFKEAKTNLGDLNGIIYSNIIHAHC 393

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
            +G MD+ +E+  +M + GI     AY  +  GY   Q+ +K   +   + E  F P+++
Sbjct: 394 QSGNMDRAEELVHEMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSII 453

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +  +I+ +   G + +AI +  +M   G+  N KT+  L+ G+        A  I + M
Sbjct: 454 SYGCLINLYVKIGKVAKAIAISKEMESSGIKHNNKTYSMLISGFIHLHDFTNAFRIFEEM 513

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
              G+ P ++ + LL EA    G    A RIL K++ KER
Sbjct: 514 LKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQ-KER 552



 Score = 99.4 bits (246), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 2/220 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C  TV +   L++ LI + + + A ++ N +   G  P+  TYT ++        
Sbjct: 583 MRRSGCAPTVMTYNALIHGLIRKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAATGD 642

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                   ++++E G+  D   +  ++ A  +SG M+ A+    +M    +   T  YN 
Sbjct: 643 IAKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSSQKIARNTFVYNI 702

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+   G   E+  L+  M  +G V PN+ TY   + A C   ++  A  V+ +M+  
Sbjct: 703 LIDGWARRGDVWEAADLMKQMKEDG-VPPNIHTYTSYINACCKAGDMQRAQTVIDEMSDV 761

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
           G+KP++ TY T+   +A+    D+A +   EM+  G++P+
Sbjct: 762 GLKPNLKTYTTLIKGWARASLPDRALKCFEEMKLAGLKPD 801


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 200/407 (49%), Gaps = 1/407 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           VR+++ L++ L++      A  +F+++I  G +P +  YT ++ +L   K  +    ++ 
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIV 251

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+E  G D + + +N +I+   +   + EA+     +    L P   TY TL+ G     
Sbjct: 252 QMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQ 311

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E  ++++D M R     P+    + LV        + EA N++ ++A  G+ P++  Y
Sbjct: 312 EFEVGLEMIDEMLRL-RFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVY 370

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  +  +    D+AE +   M   G+ PN  T  I+I  +C+ GK+  AL F   M +
Sbjct: 371 NALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMID 430

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P++  +N LI G  +  D    + ++A M   ++ P V+TY+++M  + + G ++K
Sbjct: 431 MGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              ++ +M   GI P  + ++ L  G  R      A +L   M E    PN V +  +I 
Sbjct: 491 ALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIE 550

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
           G+C +G+M +A E  ++M E G+ P+  ++  L+ G     Q   A+
Sbjct: 551 GYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEAK 597



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 223/480 (46%), Gaps = 24/480 (5%)

Query: 29  GQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCSF------------CMNKESCRTVRSMT 76
           G+MI     + G K  +Y    P +S    HC F             +NK+   TV + T
Sbjct: 426 GEMI-----DMGLKPSVY----PYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYT 476

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
            LM     +GK  +A  +++ +   G  PS+ T+TTLL+ L           + +++ E 
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEW 536

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            + P+ + +N +I  + E GNM +A +   +M E G+ P T +Y  LI G  + G+  E+
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQASEA 596

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
              +D + + GN + N   Y  L+  +C E  + EA +V   M   G+  D+V Y  +  
Sbjct: 597 KVFVDGLHK-GNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGVLID 655

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              ++ +      ++ EM   G++P+      +I    K G  KEA      M   G  P
Sbjct: 656 GSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA-GFMDKCKEI 375
           N V +  +I G  +    +  + + + M+     P+ +TY   ++  +   G M K  E+
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKAVEL 775

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            + + K G+  +   Y++L +G+ R+   E+A EL+  MI  G  P+ + +TT+IS  C 
Sbjct: 776 HNAILK-GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMISELCR 834

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              + +AIE+++ M E G+ P+   + TL+ G   A +  +A E+   M   G+ P   T
Sbjct: 835 RNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKPNTET 894



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 218/480 (45%), Gaps = 45/480 (9%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++    RGK   A +    +I+ G KPS+  Y +L+         ++  S+M+++    
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKK 467

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++P  + + +++  +   G + +A+  + +M   G+ P+  T+ TL+ G   AG   ++V
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL   M+ E NVKPN  TYNV++  +C E N+++A+  +++M   G+ PD  +Y  +   
Sbjct: 528 KLFTEMA-EWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHG 586

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGI-IISGYCKEGKIKEALRFARTMKEYGVHP 316
               G+A +A+ V V+  H G       C   ++ G+C+EGK++EAL   + M   GV  
Sbjct: 587 LCLTGQASEAK-VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDL 645

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +LV + +LI G ++  DR     +L  M +  + PD + Y+++++A S  G   +   I+
Sbjct: 646 DLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM---------------------- 414
           D M   G  P+   Y+ +  G  +     +AE L   M                      
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKG 765

Query: 415 -------------IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
                        I  G   N   +  +I G+C  G M+ A E+  +M   GVSP+  T+
Sbjct: 766 VGDMKKAVELHNAILKGLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITY 825

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL-------AEARRATGLTKEAKR 514
            T++          +A E+   M   G+ P +  +  L        E  +AT L  E  R
Sbjct: 826 TTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR 885



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 184/383 (48%), Gaps = 1/383 (0%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P+    +A+++   +  +   AM+ F  M   G+ P    Y  +I+          + ++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           +  M   G    N+  YNVL+   C ++ + EA  +   +A   +KPDVVTY T+     
Sbjct: 250 IVQMEATG-CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLC 308

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +  E +   E+I EM      P+      ++ G  K GK++EAL   + + E+GV PN+ 
Sbjct: 309 KVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIF 368

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           ++N LI    +  + D  + +   M +  + P+ +TYS +++ +   G +D       +M
Sbjct: 369 VYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEM 428

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G+KP  + Y+ L  G+ +  +   AE L+  MI     P VV +T+++ G+CS G +
Sbjct: 429 IDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           ++A+ ++ +M   G+ P++ TF TL+ G   A     A ++   M  + V P + T+ ++
Sbjct: 489 NKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVM 548

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
            E     G   +A   L+++  K
Sbjct: 549 IEGYCEEGNMSKAFEFLNEMIEK 571



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/489 (25%), Positives = 215/489 (43%), Gaps = 71/489 (14%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT---------------IQKR 122
           L++ L ++ K  EA  I  +L     KP +VTY TL+  L                ++ R
Sbjct: 268 LIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLR 327

Query: 123 FNSIHSIMS--------------------QVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
           F+   + +S                    +V E G+ P+   +NA+I++  +  N +EA 
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAE 387

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
             F +M + GL P   TY+ LI  +   GK + ++  L  M   G +KP++  YN L+  
Sbjct: 388 LLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMG-LKPSVYPYNSLING 446

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C   +I+ A ++M +M    ++P VVTY ++   Y   G+ ++A  +  EM   G+ P+
Sbjct: 447 HCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPS 506

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   ++SG  + G I++A++    M E+ V PN V +N++I+G+ E  +     E L 
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLN 566

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAG-------FMDK--------------------CKE- 374
            M E  + PD  +Y  +++     G       F+D                     C+E 
Sbjct: 567 EMIEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG 626

Query: 375 -------IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
                  +  DMG  G+  D   Y +L  G ++ ++ +    LL  M + G  P+ VI+T
Sbjct: 627 KLEEALSVCQDMGLRGVDLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYT 686

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           ++I      G    A  ++D M   G  PN  T+  ++ G  +A     AE +   M+  
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPG 746

Query: 488 GVHPQKSTF 496
              P + T+
Sbjct: 747 NSVPNQVTY 755



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 94/395 (23%), Positives = 182/395 (46%), Gaps = 35/395 (8%)

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           E  D  +   E     ++S+++ LI+ Y  + +  + V +  +M  + ++ P +RT + L
Sbjct: 139 EVFDALFSCYEKCKLSSSSSFDLLIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSAL 198

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +      ++   A  +   M   G++PDV  Y  +  +  +  +  +A+E+IV+ME  G 
Sbjct: 199 LHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGC 258

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF---------VE 330
             N     ++I G CK+ K+ EA+   + +    + P++V +  L+ G          +E
Sbjct: 259 DVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLE 318

Query: 331 IMD-----------------------RDGVDEVLALMK---EFRVNPDVITYSTIMNAWS 364
           ++D                       R  V+E L L+K   EF V+P++  Y+ ++++  
Sbjct: 319 MIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLC 378

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
                D+ + +FD MGK G+ P+   YSIL   + R  + + A   L  MI+ G  P+V 
Sbjct: 379 KGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVY 438

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            + ++I+G C  G +  A  +  +M    + P + T+ +LM GY    +  +A  +   M
Sbjct: 439 PYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEM 498

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
              G+ P   TF  L       GL ++A ++ +++
Sbjct: 499 TGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEM 533


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 217/466 (46%), Gaps = 37/466 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   L++ L +  K +EA+++   +   G  P   TY+ L   L      N    +  
Sbjct: 281 IITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYE 340

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q  E G+  ++   + ++N   + G +E+A +   K  E+GL      YNT + GY   G
Sbjct: 341 QATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIG 400

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              +++  ++ M   G ++PN  T+N L+  +C+ K + +A   + KMA  G+ P V TY
Sbjct: 401 DMNKAILTIERMESFG-LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETY 459

Query: 252 NTIATAYA-----------------------------------QNGEADQAEEVIVEMEH 276
           NT+   Y                                    ++G+  +AE V+ +M  
Sbjct: 460 NTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMIC 519

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            GV PN +   ++I G C  GK+K+ALRF   M    + P LV +N+LI G  +      
Sbjct: 520 RGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTE 579

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            ++ L  +     +PDVITY+++++ ++ AG + KC  +++ M   GIKP    Y  L  
Sbjct: 580 AEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLIS 639

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  +E   E  E+L   M++    P+ V++  +I  +   G+  +A  +   M + G+ P
Sbjct: 640 GCSKEG-IELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHP 698

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           +  T+ +L+ G+    +    ++++  MKA  + P+  T+ +L + 
Sbjct: 699 DKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKG 744



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/445 (24%), Positives = 217/445 (48%), Gaps = 6/445 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L    + ++A+ +F+ +       S+VTY TL+         ++   +  +++E  
Sbjct: 217 LIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKS 276

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ I FN++++   +   M+EA     +M+ +G  P   TY+ L  G         ++
Sbjct: 277 VAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAM 336

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L +  + +G ++ N  T ++L+   C +  + +A  ++ K   +G+  D V YNT    
Sbjct: 337 ELYEQATEKG-IRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNG 395

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G+ ++A   I  ME  G++PN  T   +I  +C   ++ +A  + + M E GV P+
Sbjct: 396 YCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPS 455

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  +N LI G+ ++   D   ++L  M+E  V P+V++Y +++N     G + + + +  
Sbjct: 456 VETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLR 515

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM   G+ P+A  Y++L  G     + + A      M+ S   P +V +  +I G C  G
Sbjct: 516 DMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKG 575

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +  A +   ++   G SP++ T+ +L+ GY+ A    +   + + MK  G+ P   T+ 
Sbjct: 576 KLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYH 635

Query: 498 LLAEARRATGLTKEAKRILSKIKNK 522
            L      +G +KE   ++ K+ N+
Sbjct: 636 PL-----ISGCSKEGIELVEKLYNE 655



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 106/438 (24%), Positives = 197/438 (44%), Gaps = 36/438 (8%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +F  +   G +     Y   + A    +        +  + + G+ P+   +N +I    
Sbjct: 163 LFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLC 222

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
               + +A   F +M    L  +  TYNTLI GY   G+ + + K+ + M +E +V PN+
Sbjct: 223 REKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERM-KEKSVAPNI 281

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY---------------------- 251
            T+N L+   C  + + EA +++ +M  +G  PD  TY                      
Sbjct: 282 ITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQ 341

Query: 252 -------------NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
                        + +     + G+ ++AEE++ +   NG+  +       ++GYC+ G 
Sbjct: 342 ATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGD 401

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           + +A+     M+ +G+ PN + FN LI  F ++ + D  +E +  M E  V P V TY+T
Sbjct: 402 MNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNT 461

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++ +      D+C +I + M + G+KP+  +Y  L     ++ +  +AE +L  MI  G
Sbjct: 462 LIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRG 521

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PN  ++  +I G C  G +  A+  FD+M    +SP L T+  L+ G  +  +   AE
Sbjct: 522 VLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAE 581

Query: 479 EILQIMKAFGVHPQKSTF 496
           + L  + + G  P   T+
Sbjct: 582 DFLTQITSSGHSPDVITY 599



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 188/379 (49%), Gaps = 6/379 (1%)

Query: 80  NSLIER----GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           NSLI++     +  +A+     + E G  PS+ TY TL+        F+    I+ Q+EE
Sbjct: 425 NSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEE 484

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ P+ + + ++IN   + G + EA      M   G+ P    YN LI G  + GK ++
Sbjct: 485 IGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKD 544

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +++  D M R   + P L TYNVL+   C +  +TEA + + ++ +SG  PDV+TYN++ 
Sbjct: 545 ALRFFDEMMR-SEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLI 603

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           + YA  G   +   +   M++ G++P  RT   +ISG  KEG I+   +    M +  + 
Sbjct: 604 SGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEG-IELVEKLYNEMLQMNLL 662

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+ V++N +I  + EI +      +   M +  ++PD +TY++++      G +   K++
Sbjct: 663 PDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDL 722

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            ++M    + P A  Y IL KG+   ++   A      M+E+ F PN  I   + +G   
Sbjct: 723 VNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQ 782

Query: 436 DGSMDRAIEVFDKMCEHGV 454
           +G +     +  +M   G+
Sbjct: 783 EGRLQEVQVICSEMNVKGI 801



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 191/446 (42%), Gaps = 35/446 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N L ++GK ++A+ I     E G     V Y T +         N     + ++E  G
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG 416

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+SI FN++I+ F +   M++A +   KM E G+TP+  TYNTLI GYG     +   
Sbjct: 417 LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCF 476

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++L+ M   G VKPN+ +Y  L+   C +  I EA  V+  M   G+ P+   YN +   
Sbjct: 477 QILEQMEEIG-VKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDG 535

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G+   A     EM  + + P   T  ++I G CK+GK+ EA  F   +   G  P+
Sbjct: 536 SCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPD 595

Query: 318 LVIFNLLIKGFV------------EIM-------------------DRDGVDEVLAL--- 343
           ++ +N LI G+             E M                    ++G++ V  L   
Sbjct: 596 VITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNE 655

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M +  + PD + Y+ +++ ++  G   K   +   M   GI PD   Y+ L  G+ RE +
Sbjct: 656 MLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGK 715

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
               ++L+  M      P    +  ++ G C       A   + +M E+   PN      
Sbjct: 716 LSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNE 775

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGV 489
           L  G  +  +    + I   M   G+
Sbjct: 776 LTAGLEQEGRLQEVQVICSEMNVKGI 801



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/357 (29%), Positives = 171/357 (47%), Gaps = 1/357 (0%)

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           + +D F +++ SG    T  Y   I+        +  ++ LD M + G V+PN+  YNVL
Sbjct: 159 KVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRG-VRPNVFIYNVL 217

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +   C EK I +A  +  +M    +   +VTYNT+   Y + GE D A ++   M+   V
Sbjct: 218 IGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSV 277

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            PN  T   ++SG CK  K+KEA    + M+  G  P+   +++L  G +   D +G  E
Sbjct: 278 APNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAME 337

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +     E  +  +  T S ++N     G ++K +EI     + G+  D   Y+    GY 
Sbjct: 338 LYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYC 397

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           R  +  KA   +  M   G  PN + F ++I  +C    MD+A E   KM E GV+P+++
Sbjct: 398 RIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVE 457

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           T+ TL+ GY +     R  +IL+ M+  GV P   ++  L       G   EA+ +L
Sbjct: 458 TYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVL 514



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/404 (24%), Positives = 192/404 (47%), Gaps = 1/404 (0%)

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
           +K+F  +  +  ++E +G   D+  +   I A  +  N++  M+    M++ G+ P    
Sbjct: 154 EKQFVKVVDLFMEIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFI 213

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           YN LI G     +  ++ K+ D M    N+  ++ TYN L+  +C    +  A+ +  +M
Sbjct: 214 YNVLIGGLCREKRIRDAEKMFDEMCNI-NLVGSIVTYNTLIDGYCKVGELDAAFKMRERM 272

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
               + P+++T+N++ +   +  +  +A  ++ EME NG  P+G T  I+  G  +    
Sbjct: 273 KEKSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDG 332

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
             A+       E G+  N    ++L+ G  +    +  +E+L    E  +  D + Y+T 
Sbjct: 333 NGAMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTF 392

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           +N +   G M+K     + M   G++P++  ++ L   +   +E +KAEE +  M E G 
Sbjct: 393 VNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGV 452

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            P+V  + T+I G+    + DR  ++ ++M E GV PN+ ++ +L+    +  +   AE 
Sbjct: 453 TPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEI 512

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           +L+ M   GV P    + +L +     G  K+A R   ++   E
Sbjct: 513 VLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSE 556



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 79/313 (25%), Positives = 142/313 (45%), Gaps = 2/313 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L+N L + GK  EA+ +  ++I  G  P+   Y  L+    +  +         
Sbjct: 491 VVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFD 550

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  + + P  + +N +I+   + G + EA D   ++  SG +P   TYN+LI GY  AG
Sbjct: 551 EMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAG 610

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              + + L + M   G +KP +RTY+ L+ + C+++ I     + ++M    + PD V Y
Sbjct: 611 NVSKCLGLYETMKNLG-IKPTVRTYHPLI-SGCSKEGIELVEKLYNEMLQMNLLPDRVVY 668

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   YA+ G   +A  +   M   G+ P+  T   +I G+ +EGK+         MK 
Sbjct: 669 NAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKA 728

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             + P    +++L+KG  ++ D  G       M E    P+    + +       G + +
Sbjct: 729 KELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQE 788

Query: 372 CKEIFDDMGKAGI 384
            + I  +M   GI
Sbjct: 789 VQVICSEMNVKGI 801



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/350 (22%), Positives = 149/350 (42%), Gaps = 70/350 (20%)

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           ++L+   C  K + EA  +   M   G  P +V+ + + +      +  +  ++ +E+E+
Sbjct: 110 DMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIEN 169

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL------------- 323
           +G + +       I    K   +K  + F  +M++ GV PN+ I+N+             
Sbjct: 170 SGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRD 229

Query: 324 ----------------------LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
                                 LI G+ ++ + D   ++   MKE  V P++IT++++++
Sbjct: 230 AEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLS 289

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR--------------------- 400
                  M + + +  +M   G  PD + YSIL  G +R                     
Sbjct: 290 GLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRI 349

Query: 401 --------------EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
                         + + EKAEE+L    E+G   + VI+ T ++G+C  G M++AI   
Sbjct: 350 NNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTI 409

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           ++M   G+ PN  TF +L+  + + ++  +AEE ++ M   GV P   T+
Sbjct: 410 ERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETY 459



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 109/250 (43%), Gaps = 35/250 (14%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAA------- 116
           M  E   T+ +   L++ L ++GK  EA+     +   GH P ++TY +L++        
Sbjct: 553 MRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNV 612

Query: 117 ------------LTIQKRFNSIHSIMSQVEENGMD---------------PDSIFFNAVI 149
                       L I+    + H ++S   + G++               PD + +NA+I
Sbjct: 613 SKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEMLQMNLLPDRVVYNAMI 672

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           + ++E GN ++A      M + G+ P   TYN+LI G+   GK      L++ M +   +
Sbjct: 673 HCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNM-KAKEL 731

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            P   TY++LV+  C+ K+ + A+    +M  +   P+    N +     Q G   + + 
Sbjct: 732 APKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQV 791

Query: 270 VIVEMEHNGV 279
           +  EM   G+
Sbjct: 792 ICSEMNVKGI 801


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 192/390 (49%), Gaps = 36/390 (9%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +M+ L + G   EA  + + +   G +P+LVTY  L+  L    R+    S++ ++ +
Sbjct: 221 STIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMK 280

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            GM PD    N +++AF + G + +A      M  +G  P   TYN+LI  Y +  K  E
Sbjct: 281 MGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNE 340

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++++  LM   G + P++  +  L+  WC +KNI +A +++ +M+  G  PDV T+ T+ 
Sbjct: 341 AMRVFHLMVSRGRL-PDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLI 399

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + Q G    A+E+ + M   G  PN +TC +I+ G CKE  + EA+  A+ M++  + 
Sbjct: 400 GGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLD 459

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            N+VI+++L+ G                                     +AG ++   E+
Sbjct: 460 LNIVIYSILLDGM-----------------------------------CSAGKLNAAWEL 484

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F  +   G++ + + Y+I+ KG  ++   +KAE+LL+ M E+G  PN   +   + G  +
Sbjct: 485 FSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLT 544

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
              + R+I+    M + G S +  T E ++
Sbjct: 545 KKEIARSIKYLTIMRDKGFSVDAATTEFII 574



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 199/404 (49%), Gaps = 1/404 (0%)

Query: 93  AIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAF 152
           ++   + + G +P+++T TTL+  L +Q        +   +E+     D   +  +IN  
Sbjct: 133 SVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGL 192

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
            ++G+   A+    KM+E    P    Y+T++ G    G   E++ L   M+ +G V+PN
Sbjct: 193 CKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKG-VRPN 251

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
           L TY  L++  CN     EA +++ +M   GM+PD+   N +  A+ + G+  QA+ VI 
Sbjct: 252 LVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIG 311

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
            M   G  P+  T   +I  YC + K+ EA+R    M   G  P++V+F  LI G+ +  
Sbjct: 312 FMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDK 371

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           + +    +L  M +    PDV T++T++  +  AG     KE+F +M K G  P+    +
Sbjct: 372 NINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCA 431

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           ++  G  +E    +A  L   M +S    N+VI++ ++ G CS G ++ A E+F  +   
Sbjct: 432 VILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGK 491

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G+  N+  +  ++ G  +     +AE++L  M+  G  P   T+
Sbjct: 492 GLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTY 535



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 129/474 (27%), Positives = 215/474 (45%), Gaps = 14/474 (2%)

Query: 59  HCSFCMNKESCRTVRSMTKL---MNSLIERGKPQ---EAQAIFNNLIEGGHKPSLVTYTT 112
           HC    N +   +  + T+L   M +L   GK +   EA  +F  +      PS+  +T 
Sbjct: 22  HCHCSTNTDDTESHSNGTQLLISMRNLCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTL 81

Query: 113 LLAALTIQKRFNSIHSIMSQVEEN-GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES 171
           LL A+   K + +  S++  +  + G++ D+I  N VIN       +         M + 
Sbjct: 82  LLGAIVRLKHYTTAISLVKHMFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKL 141

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE 231
           GL PT  T  TLI G  + G   ++V L D M +      ++ TY VL+   C   +   
Sbjct: 142 GLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMW-YPLDVYTYGVLINGLCKTGDTLA 200

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           A   + KM     KP+VV Y+TI     ++G   +A  +  EM   GV+PN  T   +I 
Sbjct: 201 AVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQ 260

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE---IMDRDGVDEVLALMKEFR 348
           G C  G+ KEA      M + G+ P+L + N+L+  F +   +M    V   + L  E  
Sbjct: 261 GLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGE-- 318

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             PDV TY+++++ +     M++   +F  M   G  PD   ++ L  G+ +++   KA 
Sbjct: 319 -GPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAM 377

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            LL  M + GF P+V  +TT+I G+C  G    A E+F  M ++G  PNL+T   ++ G 
Sbjct: 378 HLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGL 437

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            +      A  + + M+   +      + +L +   + G    A  + S +  K
Sbjct: 438 CKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGK 491



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/432 (26%), Positives = 212/432 (49%), Gaps = 7/432 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI- 129
           TV ++T L+N L  +G   +A  + +++ +  +   + TY  L+  L   K  +++ ++ 
Sbjct: 146 TVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLC--KTGDTLAAVG 203

Query: 130 -MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
            + ++EE    P+ + ++ +++   + G + EA++   +M   G+ P   TY  LI+G  
Sbjct: 204 WLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLC 263

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G+ +E+  LLD M + G ++P+L+  N+LV A+C E  + +A +V+  M  +G  PDV
Sbjct: 264 NFGRWKEAGSLLDEMMKMG-MRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDV 322

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TYN++   Y    + ++A  V   M   G  P+      +I G+CK+  I +A+     
Sbjct: 323 FTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEE 382

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M + G  P++  +  LI GF +        E+   M ++   P++ T + I++       
Sbjct: 383 MSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENL 442

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           + +   +   M K+ +  +   YSIL  G     +   A EL  ++   G   NV I+T 
Sbjct: 443 LSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTI 502

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM--KA 486
           +I G C  GS+D+A ++   M E+G  PN  T+   + G    ++  R+ + L IM  K 
Sbjct: 503 MIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKG 562

Query: 487 FGVHPQKSTFLL 498
           F V    + F++
Sbjct: 563 FSVDAATTEFII 574



 Score = 85.5 bits (210), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 92/420 (21%), Positives = 162/420 (38%), Gaps = 51/420 (12%)

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN-GVQPNGRT 285
           KNI EA ++   MA     P V  +  +  A  +      A  ++  M  + G++ +  T
Sbjct: 55  KNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGIEADTIT 114

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
             I+I+  C+                           L+  GF           VL  M 
Sbjct: 115 LNIVINCLCR-------------------------LKLVAFGF----------SVLGTMF 139

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           +  + P V+T +T++N     G + +   + D M K     D + Y +L  G  +  +  
Sbjct: 140 KLGLEPTVMTLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTL 199

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
            A   L  M E  + PNVV+++TI+ G C DG +  A+ +  +M   GV PNL T+  L+
Sbjct: 200 AAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLI 259

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS-KIKNKER 524
            G     +   A  +L  M   G+ P      +L +A    G   +AK ++   I   E 
Sbjct: 260 QGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEG 319

Query: 525 TNEMEAEEDIPVESLE-------RLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGR 577
            +       I +  L+       R++H   +    P+++   +++    K     + K  
Sbjct: 320 PDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDK--NINKAM 377

Query: 578 MLLRDADSSLECSWFATTSMYLSHSCKSGARLPIICQKQPLGQVGMYSQLAN--SCTVVF 635
            LL +          AT +  +   C++G  L     K+    +  Y Q+ N  +C V+ 
Sbjct: 378 HLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLA---AKELFLNMHKYGQVPNLQTCAVIL 434


>gi|414887035|tpg|DAA63049.1| TPA: crs2 associated factor1 [Zea mays]
          Length = 668

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 199/399 (49%), Gaps = 3/399 (0%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS---IHSIMSQVEENGMDPDSIFFNAVIN 150
           + + L E    P L +Y+ LLA+L   +       +  ++  + E+ ++PD+  F+ +I+
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLIS 236

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           AF+ +   + A++     +  GLTP ++    LI   G AG+  E+  L       G +K
Sbjct: 237 AFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIK 296

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P  R YN L++ +    ++  A  V+ +M+  G+ PD  TY+ +  AY + G  + A  +
Sbjct: 297 PRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 356

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + EME +GV+P+      I++G+   G  ++A    R M+  GV P+   +N++I  F +
Sbjct: 357 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGK 416

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
                   +    M+E  + PDV+T++T+++A    G  D+  E+F++M ++   P    
Sbjct: 417 YNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTT 476

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+I+      ++  E  E +L  M E G  PN++ +TT++  +   G    AI+  + M 
Sbjct: 477 YNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMK 536

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             G+ P+   +  L+  Y++      A  +++ MKA G+
Sbjct: 537 ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGL 575



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/373 (26%), Positives = 174/373 (46%), Gaps = 40/373 (10%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F +  E     R+   L+   +     + A+ + + + + G  P   TY+ L+ A T   
Sbjct: 289 FFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAG 348

Query: 122 RFNSIHSIMSQVEENGMD-----------------------------------PDSIFFN 146
           R+ S   ++ ++E +G+                                    PD  F+N
Sbjct: 349 RWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYN 408

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I+ F +   +  AMD F KM+E G+ P   T+NTLI  +   G+ + + +L + M RE
Sbjct: 409 VMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEM-RE 467

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            N  P   TYN+++     +++      ++ +M   G+ P+++TY T+   Y ++G   +
Sbjct: 468 SNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKE 527

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A + I  M+ +G++P+      +++ Y + G    AL   + MK  G+  ++++ N LI 
Sbjct: 528 AIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLIN 587

Query: 327 GFVEIMDRDGVD--EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
            F E  DR  V+   VL  M+E  + PDVITY+T+M A       DK   I+++M  +G 
Sbjct: 588 AFGE--DRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGC 645

Query: 385 KPDAHAYSILAKG 397
            PD  A ++L  G
Sbjct: 646 APDRKARAMLRSG 658



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/420 (23%), Positives = 193/420 (45%), Gaps = 2/420 (0%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
            + L+++      P  A  +  +    G  P     T L++AL    R     ++  +  
Sbjct: 231 FSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFF 290

Query: 135 ENG-MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             G + P +  +NA++  +    +++ A     +M + G+ P  +TY+ L+  Y  AG+ 
Sbjct: 291 LAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRW 350

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E +  LL  M  +G VKP+   ++ ++  + +  +  +A+ V+ +M ASG++PD   YN 
Sbjct: 351 ESARILLKEMEADG-VKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNV 409

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + +      A +   +M   G++P+  T   +I  +CK G+   A      M+E  
Sbjct: 410 MIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P    +N++I    E    +GV+ +L+ MKE  + P++ITY+T+++ +  +G   +  
Sbjct: 470 CPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAI 529

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           +  + M   G+KP    Y  L   Y +    + A  ++  M   G   ++++  ++I+ +
Sbjct: 530 DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAF 589

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
             D  +  A  V   M E+G+ P++ T+ TLM       Q  +   I + M   G  P +
Sbjct: 590 GEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDR 649



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 189/400 (47%), Gaps = 12/400 (3%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           ++T L+++L   G+  EA+A+F      G  KP    Y  LL          +   ++ +
Sbjct: 265 AVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDE 324

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + + G+ PD   ++ +++A++ +G  E A     +M+  G+ P++  ++ ++ G+   G 
Sbjct: 325 MSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGD 384

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +++  +L  M   G V+P+   YNV++  +     +  A +  +KM   G++PDVVT+N
Sbjct: 385 WQKAFAVLREMQASG-VRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWN 443

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+  A+ + G  D+A E+  EM  +   P   T  I+I+   ++   +        MKE 
Sbjct: 444 TLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQ 503

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDG-----VDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
           G+ PN++ +  L    V++  R G     +D + A MK   + P    Y  ++NA++  G
Sbjct: 504 GLVPNIITYTTL----VDVYGRSGRYKEAIDCIEA-MKADGLKPSPTMYHALVNAYAQRG 558

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
             D    +   M   G++      + L   +  ++   +A  +L  M E+G  P+V+ +T
Sbjct: 559 LADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYT 618

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           T++         D+   ++++M   G +P+ K    L  G
Sbjct: 619 TLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSG 658



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/396 (22%), Positives = 175/396 (44%), Gaps = 5/396 (1%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM---DTFWKMKESGLTPTTSTYNTLIK 185
           ++S + E+   PD   ++ ++ +   + +  +A         ++ES L P    ++ LI 
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLIS 236

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-M 244
            +  A  P+ +++LL      G + P       L+ A      + EA  +  +   +G +
Sbjct: 237 AFARAALPDAALELLASAQAIG-LTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEI 295

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           KP    YN +   Y +      AE+V+ EM   GV P+  T  +++  Y + G+ + A  
Sbjct: 296 KPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARI 355

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
             + M+  GV P+  +F+ ++ GF +  D      VL  M+   V PD   Y+ +++ + 
Sbjct: 356 LLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFG 415

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
               +    + F+ M + GI+PD   ++ L   + +    ++A EL   M ES   P   
Sbjct: 416 KYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTT 475

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +  +I+        +    +  +M E G+ PN+ T+ TL+  Y  + +   A + ++ M
Sbjct: 476 TYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAM 535

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           KA G+ P  + +  L  A    GL   A  ++  +K
Sbjct: 536 KADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMK 571



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 158/363 (43%), Gaps = 40/363 (11%)

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW---NVMHKMAASGMKPDVVTYNT 253
           ++LL L+ RE +  P+L +Y+ L+ +  N ++  +A     ++  +  S ++PD   ++ 
Sbjct: 175 LRLLSLL-REHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRFARTMKEY 312
           + +A+A+    D A E++   +  G+ P       +IS     G++ EA   F       
Sbjct: 234 LISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAG 293

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS-------- 364
            + P    +N L+KG+V I      ++VL  M +  V PD  TYS +++A++        
Sbjct: 294 EIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 353

Query: 365 ----------------------TAGFMD-----KCKEIFDDMGKAGIKPDAHAYSILAKG 397
                                  AGF D     K   +  +M  +G++PD H Y+++   
Sbjct: 354 RILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDT 413

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           + +      A +    M E G  P+VV + T+I   C  G  DRA E+F++M E    P 
Sbjct: 414 FGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPG 473

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
             T+  ++    E       E +L  MK  G+ P   T+  L +    +G  KEA   + 
Sbjct: 474 TTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIE 533

Query: 518 KIK 520
            +K
Sbjct: 534 AMK 536


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 182/367 (49%), Gaps = 6/367 (1%)

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
           G   P +  Y  LL AL  +    ++  +   + + G+DP+   +N +I A  ++  ++ 
Sbjct: 116 GCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDA 175

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A     +M   G  P   ++ T++ G    G+ EE+   L          P   +YN +V
Sbjct: 176 ARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL------AETVPVQASYNAVV 229

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
            A C E  + E ++V+++M   G++P+VVTY TI  A+ +  E   A  ++  M   G  
Sbjct: 230 HALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCT 289

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           PN  T   ++ G+ ++GK+ +AL     M + G  P+ + +N+LI+G   I D  G  + 
Sbjct: 290 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDF 349

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
              MK   + P+  TYST+++ +S AG +D    I+++M  +G KP+   Y+ +     +
Sbjct: 350 FNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCK 409

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
           +   ++AE L+  M+     PN V F T+I   C  G + RA+ VF  M  +G  PN +T
Sbjct: 410 KMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRT 469

Query: 461 FETLMWG 467
           +  L+ G
Sbjct: 470 YNELLHG 476



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 192/394 (48%), Gaps = 5/394 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++++L    +  E  ++ N +++ G +P++VTYTT++ A    +      +I++++
Sbjct: 224 SYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM 283

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P+ + F A++  F E G + +A+  +  M + G  P+T +YN LI+G    G  
Sbjct: 284 VSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDL 343

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + ++   + M R   + PN  TY+ LV  + N  ++  A  + ++M +SG KP+VV Y  
Sbjct: 344 KGALDFFNSMKRNA-LLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTN 402

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     +    DQAE +I +M  +   PN  T   +I   C  G++  AL     M+  G
Sbjct: 403 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 462

Query: 314 VHPNLVIFNLLIKG-FVEIMDRDGVDEVLALMKE-FRVNPDVITYSTIMNAWSTAGFMDK 371
            HPN   +N L+ G F E   +D    V+ ++   F ++  ++TY+T++N          
Sbjct: 463 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELS--LVTYNTVINCLCQMCMRKH 520

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +   M   GI+PDA  ++ +   Y +E +   A  LL  M       NVV +T +IS
Sbjct: 521 AMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILIS 580

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
             C+ G +  A+    KM   G+ PN  T+  L+
Sbjct: 581 ELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 614



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 179/410 (43%), Gaps = 40/410 (9%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGL-TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           A I AF+ +G+ + A+ TF++  + G   P    YN L+            V + D M +
Sbjct: 91  AAIGAFARAGSADRALKTFYRASDLGCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRK 150

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G V PN+ TYN+L+RA C    +  A  ++ +M+  G  PD V++ TI +   + G  +
Sbjct: 151 AG-VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVE 209

Query: 266 QAE------------------------------EVIVEMEHNGVQPNGRTCGIIISGYCK 295
           +A                                V+ EM   G+QPN  T   I+  +CK
Sbjct: 210 EARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCK 269

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLAL---MKEFRVNP 351
             +++ A      M   G  PN++ F  L+KGF E    DG V + L++   M +    P
Sbjct: 270 ARELRMACAILARMVSMGCTPNVLTFTALVKGFFE----DGKVHDALSMWHWMVDEGWAP 325

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
             I+Y+ ++      G +    + F+ M +  + P+A  YS L  G+    + + A  + 
Sbjct: 326 STISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIW 385

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M  SG  PNVV++T +I   C     D+A  + DKM      PN  TF TL+    + 
Sbjct: 386 NEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDC 445

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            +  RA  +   M+  G HP   T+  L       G  K+A  ++ ++ N
Sbjct: 446 GRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLN 495



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/450 (22%), Positives = 191/450 (42%), Gaps = 33/450 (7%)

Query: 69  CRT--VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           CR   VR    L+++L+          +++N+ + G  P++ TY  L+ AL    R ++ 
Sbjct: 117 CRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAA 176

Query: 127 HSIMSQVEENGMDPDSIF------------------------------FNAVINAFSESG 156
             ++ ++   G  PD +                               +NAV++A     
Sbjct: 177 RKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEF 236

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            M E      +M + GL P   TY T++  +  A +   +  +L  M   G   PN+ T+
Sbjct: 237 RMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMG-CTPNVLTF 295

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
             LV+ +  +  + +A ++ H M   G  P  ++YN +       G+   A +    M+ 
Sbjct: 296 TALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKR 355

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
           N + PN  T   ++ G+   G +  A+     MK  G  PN+V++  +I    + M  D 
Sbjct: 356 NALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQ 415

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            + ++  M      P+ +T++T++      G + +   +F  M + G  P+   Y+ L  
Sbjct: 416 AESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLH 475

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  RE   + A  +++ M+ +GF  ++V + T+I+  C       A+ +  +M   G+ P
Sbjct: 476 GLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQP 535

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           +  TF  ++  Y +  +   A  +L  M A
Sbjct: 536 DAFTFNAIIHAYCKEGKVSIAACLLGQMNA 565



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 94/374 (25%), Positives = 170/374 (45%), Gaps = 7/374 (1%)

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           A +   + +G+++       +M+  G+  T       I  +  AG  + ++K     S  
Sbjct: 56  ATVRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDL 115

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G   P +R YN L+ A   E  +     V   M  +G+ P+V TYN +  A  QN   D 
Sbjct: 116 GCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDA 175

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF-ARTMKEYGVHPNLVIFNLLI 325
           A +++ EM   G  P+  + G I+SG CK G+++EA  F A T+      P    +N ++
Sbjct: 176 ARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV------PVQASYNAVV 229

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                      V  V+  M +  + P+V+TY+TI++A+  A  +     I   M   G  
Sbjct: 230 HALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCT 289

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P+   ++ L KG+  + +   A  +   M++ G+ P+ + +  +I G C  G +  A++ 
Sbjct: 290 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDF 349

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F+ M  + + PN  T+ TL+ G+S A     A  I   MK+ G  P    +  + +    
Sbjct: 350 FNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCK 409

Query: 506 TGLTKEAKRILSKI 519
             +  +A+ ++ K+
Sbjct: 410 KMMFDQAESLIDKM 423



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L++     G    A  I+N +   G KP++V YT ++  L  +  F+   S++ ++
Sbjct: 364 TYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKM 423

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +   P+++ FN +I    + G +  A++ F  M+ +G  P   TYN L+ G    G  
Sbjct: 424 LMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNH 483

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +++  ++  M   G  + +L TYN ++   C       A  ++ +M   G++PD  T+N 
Sbjct: 484 KDAFAMVIEMLNNG-FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNA 542

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           I  AY + G+   A  ++ +M       N     I+IS  C +GK+  A+ +   M   G
Sbjct: 543 IIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEG 602

Query: 314 VHPNLVIFNLLIKGF 328
           + PN   +N+L++  
Sbjct: 603 ICPNEATWNVLVRAI 617



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 1/188 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L+  L + G+   A  +F+ +   G  P+  TY  LL  L  +       +++ ++
Sbjct: 434 TFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEM 493

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             NG +   + +N VIN   +    + AM    +M   G+ P   T+N +I  Y   GK 
Sbjct: 494 LNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKV 553

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +  LL  M+   N   N+  Y +L+   CN+  ++ A   + KM   G+ P+  T+N 
Sbjct: 554 SIAACLLGQMNAV-NCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNV 612

Query: 254 IATAYAQN 261
           +  A   N
Sbjct: 613 LVRAIFTN 620


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 192/396 (48%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           RS   L+      G+ +EA A+   +   G      T T ++ A   Q RF ++  +  +
Sbjct: 182 RSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLFRR 241

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + E G  P+ + ++A I+   E G +++A     +M   GL P   T+ +LI G    G 
Sbjct: 242 MSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGW 301

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            E + +L   + +  + KPN+ TY V++  +C E  +  A  ++ +M   G+ P+  TY 
Sbjct: 302 MERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYT 361

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+   + + G  D+A E++ +M+  G  PN  T   II G+CK+GKI+EA +  R     
Sbjct: 362 TLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQ 421

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+H + V + +LI    +        ++   M E   +PD+ TY+TI+  +     M++ 
Sbjct: 422 GLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQS 481

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           +++FD     G+ P    Y+ +  GY R  +   A ++   M++ G  P+ + +  +IS 
Sbjct: 482 QQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISS 541

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            C +  ++ A  +F+ M +  + P   T  TL + Y
Sbjct: 542 LCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEY 577



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/401 (25%), Positives = 186/401 (46%), Gaps = 2/401 (0%)

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
           GG +P   ++  L+     + RF    ++++ +   G   DS     V+ AF   G    
Sbjct: 175 GGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRN 234

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
             D F +M E G  P    Y+  I G    G  +++  +L+ M  +G +KPN+ T+  L+
Sbjct: 235 VTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKG-LKPNVYTHTSLI 293

Query: 221 RAWCNEKNITEAWNVMHKMA-ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
              C    +  A+ +  K+  +S  KP+V TY  +   Y + G+  +AE ++  M   G+
Sbjct: 294 DGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGL 353

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            PN  T   +I G+CK G    A      MK  G  PN+  +N +I GF +        +
Sbjct: 354 APNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYK 413

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           VL +     ++ D +TY+ ++      G +    ++F  M +    PD H Y+ +   Y 
Sbjct: 414 VLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYC 473

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           ++++ E++++L    +  G  P    +T++I+G+C  G +  A++VF++M +HG  P+  
Sbjct: 474 QQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSI 533

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
           T+  L+    +  +   A  + + M    + P   T + LA
Sbjct: 534 TYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLA 574



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/389 (23%), Positives = 174/389 (44%), Gaps = 8/389 (2%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           FC++  +C      T ++ +   +G+ +    +F  + E G  P++V Y+  +  L  + 
Sbjct: 212 FCLDSATC------TVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERG 265

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM-KESGLTPTTSTY 180
                  ++ ++   G+ P+     ++I+   + G ME A   F K+ K S   P   TY
Sbjct: 266 YVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTY 325

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
             +I GY   GK   +  LL  M  +G + PN  TY  L+   C   +   A+ +M+KM 
Sbjct: 326 TVMIGGYCKEGKLARAEMLLGRMVEQG-LAPNTNTYTTLIHGHCKGGSFDRAFELMNKMK 384

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
             G  P++ TYN I   + + G+  +A +V+      G+  +  T  I+I+ +CK+G I 
Sbjct: 385 LEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHIT 444

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
            AL   + M E   HP++  +  +I  + +    +   ++        + P   TY++++
Sbjct: 445 CALDLFKQMAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMI 504

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
             +   G +    ++F+ M + G  PD+  Y  L     +E   E+A  L  TM++    
Sbjct: 505 AGYCRLGKLTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLV 564

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           P  V   T+   +C    +  A+   D++
Sbjct: 565 PCDVTRVTLAYEYCRRDKITIAVSFLDRL 593



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 94/389 (24%), Positives = 178/389 (45%), Gaps = 2/389 (0%)

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ PD   F A++      G  EEA      M   G    ++T   +++ +   G+   
Sbjct: 175 GGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRN 234

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
              L   MS  G   PN+  Y+  +   C    + +A++V+ +M   G+KP+V T+ ++ 
Sbjct: 235 VTDLFRRMSEMGT-PPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLI 293

Query: 256 TAYAQNGEADQAEEVIVEM-EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
               + G  ++A  + +++ + +  +PN  T  ++I GYCKEGK+  A      M E G+
Sbjct: 294 DGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGL 353

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            PN   +  LI G  +    D   E++  MK     P++ TY+ I+  +   G + +  +
Sbjct: 354 APNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYK 413

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +       G+  D   Y+IL   + ++     A +L   M E   HP++  +TTII+ +C
Sbjct: 414 VLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYC 473

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
               M+++ ++FDK    G+ P  +T+ +++ GY    +   A ++ + M   G  P   
Sbjct: 474 QQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSI 533

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNKE 523
           T+  L  +       +EA+ +   + +K 
Sbjct: 534 TYGALISSLCKESRLEEARALFETMLDKH 562



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 88/347 (25%), Positives = 152/347 (43%), Gaps = 5/347 (1%)

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK-GYGIAGKPEESVKLLDLMSRE-GNVKP 211
           E+G + EA D   +++  GL     T N +++ G    G    + +  D M+R  G V+P
Sbjct: 120 EAGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRP 179

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           + R++  LV   C E    EA  ++  M A G   D  T   +  A+ + G      ++ 
Sbjct: 180 DHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLF 239

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
             M   G  PN       I G C+ G +K+A      M   G+ PN+     LI G  +I
Sbjct: 240 RRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKI 299

Query: 332 --MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
             M+R      L L+K     P+V TY+ ++  +   G + + + +   M + G+ P+ +
Sbjct: 300 GWMER-AFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTN 358

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+ L  G+ +    ++A EL+  M   GF PN+  +  II G+C  G +  A +V    
Sbjct: 359 TYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMA 418

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
              G+  +  T+  L+  + +      A ++ + M     HP   T+
Sbjct: 419 TSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTY 465



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 49/207 (23%), Positives = 92/207 (44%), Gaps = 6/207 (2%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M ++SC   + + T ++    ++ + +++Q +F+  +  G  P+  TYT+++A      +
Sbjct: 453 MAEKSCHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGK 512

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
             S   +  ++ ++G  PDSI + A+I++  +   +EEA   F  M +  L P   T  T
Sbjct: 513 LTSALKVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVT 572

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L   Y    K   +V  LD + +    +    T + LVR      N+  A   +  +   
Sbjct: 573 LAYEYCRRDKITIAVSFLDRLDK----RQQAHTADALVRKLSTVGNLDAASLFLKNVLDK 628

Query: 243 GMKPDVVTYNT-IATAYAQNGEADQAE 268
               D  TY + I + Y  N  A  +E
Sbjct: 629 HYAVDHATYTSFINSCYESNRYALASE 655


>gi|308810923|ref|XP_003082770.1| leaf protein (ISS) [Ostreococcus tauri]
 gi|116061239|emb|CAL56627.1| leaf protein (ISS) [Ostreococcus tauri]
          Length = 807

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/406 (26%), Positives = 191/406 (47%), Gaps = 41/406 (10%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           L   GH+P+  T+T ++A L    R     S++  +EE G + D   +NAV +A   SG+
Sbjct: 121 LARDGHRPTRKTFTAVIATLGGMGRATETLSVVPMIEEYGDEADVAVWNAVAHAHCASGD 180

Query: 158 MEEAMDTFWKMK-ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
             EA     +M  E G+  + +T+  +I  Y   G+   + +L+  MS E  V P+ R Y
Sbjct: 181 PVEAERIADRMAAEGGVGVSGATHPEIIYTYARYGEANRAYRLIRRMSNEHGVIPDERHY 240

Query: 217 NVLVRAWCNEKNITEA------WN----VMHKMAASG---MKPDVVTYNTIATAYAQNGE 263
           N  +R  C   ++ EA      WN     + + +  G    KP   +Y  +  A+A+ G 
Sbjct: 241 NAFLRGLCERDDLEEADEVLRRWNNEKFDLERQSDRGGRVSKPSAASYGLLIDAWARRGN 300

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
              A +++ +M+   + P+ +   I+I GY K+G I  A    R ++  G          
Sbjct: 301 MLAARKLLQQMQWERIAPSLQLFNILIGGYLKQGNIGAAEGLFRELESSGTWD------- 353

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
                               M+   + PD +TY+  ++ W++ G +D C+ IFD M +  
Sbjct: 354 --------------------MESLGIRPDNVTYTLFLDYWASQGQVDACERIFDRMARKK 393

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           +  D  A+  L K Y R ++P+ AE +L  +  +   P+V +++ +I+ +C+ G M RA 
Sbjct: 394 VTADVQAFGTLVKAYARARDPDGAERVLDRLEAADVEPSVAVYSAVIAAFCTVGEMKRAR 453

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           E+ D+M +  + PN +TF    WGY +        ++ ++M A G+
Sbjct: 454 EILDRMFDASLRPNERTFAHFAWGYGQLEDINGIVDVAKLMLANGL 499



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 159/349 (45%), Gaps = 25/349 (7%)

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           ++R+G+ +P  +T+  ++         TE  +V+  +   G + DV  +N +A A+  +G
Sbjct: 121 LARDGH-RPTRKTFTAVIATLGGMGRATETLSVVPMIEEYGDEADVAVWNAVAHAHCASG 179

Query: 263 EADQAEEVIVEME-HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK-EYGVHPNLVI 320
           +  +AE +   M    GV  +G T   II  Y + G+   A R  R M  E+GV P+   
Sbjct: 180 DPVEAERIADRMAAEGGVGVSGATHPEIIYTYARYGEANRAYRLIRRMSNEHGVIPDERH 239

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVN-------------PDVITYSTIMNAWSTAG 367
           +N  ++G  E  D +  DEVL      + +             P   +Y  +++AW+  G
Sbjct: 240 YNAFLRGLCERDDLEEADEVLRRWNNEKFDLERQSDRGGRVSKPSAASYGLLIDAWARRG 299

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG--------F 419
            M   +++   M    I P    ++IL  GY+++     AE L   +  SG         
Sbjct: 300 NMLAARKLLQQMQWERIAPSLQLFNILIGGYLKQGNIGAAEGLFRELESSGTWDMESLGI 359

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            P+ V +T  +  W S G +D    +FD+M    V+ +++ F TL+  Y+ AR P  AE 
Sbjct: 360 RPDNVTYTLFLDYWASQGQVDACERIFDRMARKKVTADVQAFGTLVKAYARARDPDGAER 419

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE-RTNE 527
           +L  ++A  V P  + +  +  A    G  K A+ IL ++ +   R NE
Sbjct: 420 VLDRLEAADVEPSVAVYSAVIAAFCTVGEMKRAREILDRMFDASLRPNE 468



 Score = 55.5 bits (132), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 39/193 (20%), Positives = 86/193 (44%), Gaps = 9/193 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGH--------KPSLVTYTTLLAALTIQKRFNSIHSI 129
           L+   +++G    A+ +F  L   G         +P  VTYT  L     Q + ++   I
Sbjct: 326 LIGGYLKQGNIGAAEGLFRELESSGTWDMESLGIRPDNVTYTLFLDYWASQGQVDACERI 385

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++    +  D   F  ++ A++ + + + A     +++ + + P+ + Y+ +I  +  
Sbjct: 386 FDRMARKKVTADVQAFGTLVKAYARARDPDGAERVLDRLEAADVEPSVAVYSAVIAAFCT 445

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+ + + ++LD M  + +++PN RT+      +   ++I    +V   M A+G+K    
Sbjct: 446 VGEMKRAREILDRMF-DASLRPNERTFAHFAWGYGQLEDINGIVDVAKLMLANGLKLKGA 504

Query: 250 TYNTIATAYAQNG 262
             N I  A  + G
Sbjct: 505 NRNAIVRACEECG 517



 Score = 45.4 bits (106), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 35/153 (22%), Positives = 65/153 (42%), Gaps = 2/153 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T  ++    +G+    + IF+ +        +  + TL+ A    +  +    ++ ++
Sbjct: 365 TYTLFLDYWASQGQVDACERIFDRMARKKVTADVQAFGTLVKAYARARDPDGAERVLDRL 424

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E   ++P    ++AVI AF   G M+ A +   +M ++ L P   T+     GYG     
Sbjct: 425 EAADVEPSVAVYSAVIAAFCTVGEMKRAREILDRMFDASLRPNERTFAHFAWGYGQLEDI 484

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
              V +  LM   G +K      N +VRA C E
Sbjct: 485 NGIVDVAKLMLANG-LKLKGANRNAIVRA-CEE 515


>gi|293335157|ref|NP_001169529.1| uncharacterized protein LOC100383403 [Zea mays]
 gi|224029903|gb|ACN34027.1| unknown [Zea mays]
 gi|414887232|tpg|DAA63246.1| TPA: hypothetical protein ZEAMMB73_160132 [Zea mays]
          Length = 819

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 217/448 (48%), Gaps = 3/448 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N+    G  ++A  +   + E G  P L+T+  +L+A     +++   +    ++ + 
Sbjct: 229 VINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSK 288

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT--PTTSTYNTLIKGYGIAGKPEE 195
           + PD+   N VI+   + G   EA++ F  M+E   T  P   TY +++  Y + G+ E 
Sbjct: 289 VAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAEN 348

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
              + D+M  EG V+PN+ +YN L+ A+ +    TEA      +  +G++PD+V+Y ++ 
Sbjct: 349 CKAVFDIMVAEG-VRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLL 407

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            AY ++ + ++A EV  EM  N  +PN  +   +I  Y   G +KEA+     M++ G+ 
Sbjct: 408 NAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQ 467

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+++  + L+           +D +LA  K   +  + + Y++ + ++ + G   K   +
Sbjct: 468 PDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVL 527

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           +  M    +KPDA  Y+IL  G  +     ++ +    M++   H    +++++I  +  
Sbjct: 528 YTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVYSSVICSYVK 587

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G +  A   F+ M E G  P++ T+ TL+  YS+     RA ++ + M+  G  P    
Sbjct: 588 QGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIV 647

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKE 523
              L EA    G  +   +++  +K K+
Sbjct: 648 CSSLMEALNKGGQPERVLQLIEFMKQKK 675



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 193/381 (50%), Gaps = 5/381 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +M S    G+ +  +A+F+ ++  G +P++V+Y  LL A               
Sbjct: 330 VVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFK 389

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +++NG+ PD + + +++NA+  S   E+A + F +M+++   P   +YN LI  YG AG
Sbjct: 390 LLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAG 449

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E++ LL  M ++G ++P++ + + L+ A    K +T+   ++    + G++ + V Y
Sbjct: 450 MLKEAISLLHEMEQDG-IQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAY 508

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N+   +Y   G+  +A  +   M    V+P+  T  I+ISG CK G+  E+L+F   M +
Sbjct: 509 NSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLD 568

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             +H    +++ +I  +V+             MKE    PDV+TY+T++ A+S  G   +
Sbjct: 569 LNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRR 628

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             ++F +M   G +PDA   S L +   +  +PE+  +L+  M +     N   +  IIS
Sbjct: 629 AWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIIS 688

Query: 432 GWCSDGSMDRAIEVFDKMCEH 452
             C   +M R  +   ++ EH
Sbjct: 689 S-C---TMLRDWKTASQIIEH 705



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/419 (24%), Positives = 215/419 (51%), Gaps = 19/419 (4%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIE--GGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +M  +++ L++ G   EA  +FN++ E      P +VTYT+++ + ++  +  +  ++  
Sbjct: 295 TMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFD 354

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ P+ + +NA++ A++  G   EA++TF  +K++GL P   +Y +L+  YG + 
Sbjct: 355 IMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSA 414

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +PE++ ++ + M R+   KPN  +YN L+ A+ +   + EA +++H+M   G++PDV++ 
Sbjct: 415 QPEKAREVFNEM-RKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISI 473

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +T+ TA  +  +  + + ++   +  G+Q N       I  Y   G  K+AL    +M+ 
Sbjct: 474 STLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRA 533

Query: 312 YGVHPNLVIFNLLIKG------FVEIMD--RDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
             V P+ V +N+LI G      +VE +    D +D  + L KE         YS+++ ++
Sbjct: 534 GNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKE--------VYSSVICSY 585

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G + +    F+ M + G  PD   Y+ L K Y  +    +A +L   M  +G  P+ 
Sbjct: 586 VKQGKLTEAASTFNSMKETGCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDA 645

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           ++ ++++      G  +R +++ + M +  +  N K +  ++   +  R    A +I++
Sbjct: 646 IVCSSLMEALNKGGQPERVLQLIEFMKQKKIQLNQKAYFEIISSCTMLRDWKTASQIIE 704



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 88/349 (25%), Positives = 173/349 (49%), Gaps = 3/349 (0%)

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            +  +I   +    +++A   F++M+E    P T TYN+LI  +  AG+   ++ ++D M
Sbjct: 155 IYGMMIRLHARHNKVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDM 214

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            R   + P+  TYN ++ A     N  +A  +  KM  +G+ PD++T+N + +A+    +
Sbjct: 215 QRAA-IPPSRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQ 273

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY--GVHPNLVIF 321
             +A      M+ + V P+  T  I+I    K G   EA+    +M+E     HP++V +
Sbjct: 274 YSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTY 333

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
             ++  +      +    V  +M    V P++++Y+ ++ A+++ G   +  E F  + +
Sbjct: 334 TSIMYSYSVCGQAENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQ 393

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G++PD  +Y+ L   Y R  +PEKA E+   M ++   PN V +  +I  + S G +  
Sbjct: 394 NGLRPDIVSYTSLLNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKE 453

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           AI +  +M + G+ P++ +  TL+      +Q  + + IL   K+ G+ 
Sbjct: 454 AISLLHEMEQDGIQPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQ 502



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/412 (23%), Positives = 194/412 (47%), Gaps = 3/412 (0%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A+ +F  + E   KP+  TY +L+ A     ++    +IM  ++   + P    +N
Sbjct: 168 KVDQARGLFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYN 227

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            VINA   +GN ++A++   KM E+G+ P   T+N ++  +    +  +++   ++M + 
Sbjct: 228 NVINACGAAGNWKKALELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIM-KS 286

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM--AASGMKPDVVTYNTIATAYAQNGEA 264
             V P+  T N+++          EA  + + M    +   PDVVTY +I  +Y+  G+A
Sbjct: 287 SKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQA 346

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           +  + V   M   GV+PN  +   ++  Y   G   EAL   + +K+ G+ P++V +  L
Sbjct: 347 ENCKAVFDIMVAEGVRPNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSL 406

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           +  +      +   EV   M++    P+ ++Y+ +++A+ +AG + +   +  +M + GI
Sbjct: 407 LNAYGRSAQPEKAREVFNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGI 466

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           +PD  + S L     R ++  K + +L      G   N V + + I  + S G   +A+ 
Sbjct: 467 QPDVISISTLLTACGRCKQLTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALV 526

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           ++  M    V P+  T+  L+ G  +  +   + +  + M    +H  K  +
Sbjct: 527 LYTSMRAGNVKPDAVTYNILISGSCKLGRYVESLKFFEDMLDLNIHLTKEVY 578



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/340 (23%), Positives = 158/340 (46%), Gaps = 2/340 (0%)

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI+   I+G  + +V +   M  + N       Y +++R       + +A  +  +M   
Sbjct: 123 LIREIAISGSLKHAVHVFRWMKNQENYCARNDIYGMMIRLHARHNKVDQARGLFFEMQEW 182

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
             KP+  TYN++  A+A+ G+   A  ++ +M+   + P+  T   +I+     G  K+A
Sbjct: 183 RCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYNNVINACGAAGNWKKA 242

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L   + M E GV P+L+  N+++  F              +MK  +V PD  T + +++ 
Sbjct: 243 LELCKKMTENGVGPDLITHNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHC 302

Query: 363 WSTAGFMDKCKEIFDDM--GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
               G   +  E+F+ M   +    PD   Y+ +   Y    + E  + +   M+  G  
Sbjct: 303 LVKIGLYGEAIELFNSMRERRTTCHPDVVTYTSIMYSYSVCGQAENCKAVFDIMVAEGVR 362

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN+V +  ++  + S G    A+E F  + ++G+ P++ ++ +L+  Y  + QP +A E+
Sbjct: 363 PNIVSYNALLGAYASHGMHTEALETFKLLKQNGLRPDIVSYTSLLNAYGRSAQPEKAREV 422

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
              M+     P K ++  L +A  + G+ KEA  +L +++
Sbjct: 423 FNEMRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEME 462



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 87/378 (23%), Positives = 181/378 (47%), Gaps = 2/378 (0%)

Query: 64  MNKESCRTVR-SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K +C+  + S   L+++    G  +EA ++ + + + G +P +++ +TLL A    K+
Sbjct: 426 MRKNACKPNKVSYNALIDAYGSAGMLKEAISLLHEMEQDGIQPDVISISTLLTACGRCKQ 485

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
              I  I++  +  G+  +++ +N+ I ++   G+ ++A+  +  M+   + P   TYN 
Sbjct: 486 LTKIDIILAAAKSRGIQLNTVAYNSGIGSYLSLGDYKKALVLYTSMRAGNVKPDAVTYNI 545

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G    G+  ES+K  + M  + N+      Y+ ++ ++  +  +TEA +  + M  +
Sbjct: 546 LISGSCKLGRYVESLKFFEDM-LDLNIHLTKEVYSSVICSYVKQGKLTEAASTFNSMKET 604

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G  PDV+TY T+  AY+ +G   +A ++  EME+NG QP+   C  ++    K G+ +  
Sbjct: 605 GCFPDVLTYTTLIKAYSDDGSWRRAWDLFKEMENNGTQPDAIVCSSLMEALNKGGQPERV 664

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L+    MK+  +  N   +  +I     + D     +++  +     +    T + I+N 
Sbjct: 665 LQLIEFMKQKKIQLNQKAYFEIISSCTMLRDWKTASQIIEHLDSSLSSISFGTLNHILNF 724

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G  +   ++F  M  +        Y+IL +  +   +  K  E+L  M ++G  P 
Sbjct: 725 LGKCGRTESMMKLFYKMVTSCSTVGLSTYTILLRNLLIVGKWRKYVEVLQWMEDAGVCPT 784

Query: 423 VVIFTTIISGWCSDGSMD 440
           + ++ +++     D SMD
Sbjct: 785 LYMYQSVLPYIWRDNSMD 802



 Score = 58.9 bits (141), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 42/246 (17%)

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR-DGVDEVLA 342
           R   ++I      G +K A+   R MK      N    N +    + +  R + VD+   
Sbjct: 118 RNFPLLIREIAISGSLKHAVHVFRWMKN---QENYCARNDIYGMMIRLHARHNKVDQARG 174

Query: 343 L---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           L   M+E+R  P+  TY+++++A + AG       I DDM +A I P    Y+       
Sbjct: 175 LFFEMQEWRCKPNTDTYNSLIHAHARAGQWCWAINIMDDMQRAAIPPSRTTYN------- 227

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
                                        +I+   + G+  +A+E+  KM E+GV P+L 
Sbjct: 228 ----------------------------NVINACGAAGNWKKALELCKKMTENGVGPDLI 259

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T   ++  +    Q  +A    +IMK+  V P   T  ++       GL  EA  + + +
Sbjct: 260 THNIVLSAFKNGAQYSKAIAYFEIMKSSKVAPDTCTMNIVIHCLVKIGLYGEAIELFNSM 319

Query: 520 KNKERT 525
           + +  T
Sbjct: 320 RERRTT 325


>gi|356508736|ref|XP_003523110.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Glycine max]
          Length = 680

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/479 (24%), Positives = 219/479 (45%), Gaps = 38/479 (7%)

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           +F +++    T  +   L+ +    G  ++A  + + +   G++P  V Y++++  LT  
Sbjct: 158 AFLLSQRQVLTPLTYNALIGACARNGDVEKALNLMSKMRRDGYQPDFVNYSSIIQYLTRS 217

Query: 121 KRFNS--IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
            + +S  +  + +++E + ++ D    N +I  FS++G+   AM      + +GL P  S
Sbjct: 218 NKIDSPILQKLYAEIETDKIEIDGHLMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPS 277

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           T   +I   G +G+  E+  L + + RE  ++P  R YN L++ +    ++ +A  V+ +
Sbjct: 278 TLVAVILALGNSGRTHEAEALFEEI-RENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSE 336

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  +G+KPD  TY+ +   YA  G  + A  V+ EME + VQPN      I++ Y  +G+
Sbjct: 337 MEKAGVKPDEQTYSLLIDVYAHAGRWESARIVLKEMEASNVQPNSYVFSRILANYRDKGE 396

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
            +++ +  + MK  GV P+   +N++I  F +    D        M    + PD++T++T
Sbjct: 397 WQKSFQVLKDMKSSGVQPDRHFYNVMIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNT 456

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++    +G  D  +E+F +M + G  P    Y+I+      +Q  E+    L  M   G
Sbjct: 457 LIDCHCKSGRHDMAEELFSEMQQRGYSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQG 516

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIE---------------------------------- 444
             PN + +TT++  +   G    AIE                                  
Sbjct: 517 LQPNSITYTTLVDVYGKSGRFSDAIECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAV 576

Query: 445 -VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
             F  M   G++P+L    +L+  + E R+   A  +LQ MK   + P   T+  L +A
Sbjct: 577 NAFRLMTTEGLTPSLLALNSLINAFGEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKA 635



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/431 (23%), Positives = 195/431 (45%), Gaps = 5/431 (1%)

Query: 78  LMNSLI----ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           LMN +I    + G P  A          G  P   T   ++ AL    R +   ++  ++
Sbjct: 243 LMNDIIVGFSKAGDPTRAMRFLAMAQSNGLNPKPSTLVAVILALGNSGRTHEAEALFEEI 302

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            ENG++P +  +NA++  +  +G++++A     +M+++G+ P   TY+ LI  Y  AG+ 
Sbjct: 303 RENGLEPRTRAYNALLKGYVRTGSLKDAEFVVSEMEKAGVKPDEQTYSLLIDVYAHAGRW 362

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E +  +L  M    NV+PN   ++ ++  + ++    +++ V+  M +SG++PD   YN 
Sbjct: 363 ESARIVLKEM-EASNVQPNSYVFSRILANYRDKGEWQKSFQVLKDMKSSGVQPDRHFYNV 421

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + +    D A      M   G+ P+  T   +I  +CK G+   A      M++ G
Sbjct: 422 MIDTFGKYNCLDHAMATFERMLSEGIPPDIVTWNTLIDCHCKSGRHDMAEELFSEMQQRG 481

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P +  +N++I    E    + V   L+ M+   + P+ ITY+T+++ +  +G      
Sbjct: 482 YSPCITTYNIMINSMGEQQRWEQVTAFLSKMQSQGLQPNSITYTTLVDVYGKSGRFSDAI 541

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E  + +   G KP +  Y+ L   Y +    E A      M   G  P+++   ++I+ +
Sbjct: 542 ECLEVLKSTGFKPTSTMYNALINAYAQRGLSELAVNAFRLMTTEGLTPSLLALNSLINAF 601

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
             D     A  V   M E+ + P++ T+ TLM       +  +   + + M A G  P +
Sbjct: 602 GEDRRDAEAFAVLQYMKENNIEPDVVTYTTLMKALIRVEKFQKVPAVYEEMVASGCTPDR 661

Query: 494 STFLLLAEARR 504
               +L  A R
Sbjct: 662 KARAMLRSALR 672


>gi|225464790|ref|XP_002268064.1| PREDICTED: pentatricopeptide repeat-containing protein At2g26790,
           mitochondrial [Vitis vinifera]
          Length = 817

 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 207/414 (50%), Gaps = 26/414 (6%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSL--VTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           ++++L + GK +EA  + N +   G + SL  V YTTL+A   +Q +     ++  +++E
Sbjct: 408 VVDALCKLGKVEEAVELLNEM--KGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKE 465

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++PD + +N ++  FS +G  +EA++    +   GL P ++T+N +I+G  +AGK +E
Sbjct: 466 RGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKE 525

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +   L+ +  +      L  Y+ +V  +C      +A+ +  +++  G+     +   + 
Sbjct: 526 AEAFLNTLEDKC-----LENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLL 580

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           ++    GE D+A  ++  M    V+PN    G +I  +C++G +K A      + E G+ 
Sbjct: 581 SSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVERGIT 640

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF------- 368
           P+++ + ++I G+  +       ++   MKE  + PDVITY+ +++  S           
Sbjct: 641 PDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMARSLQ 700

Query: 369 ---------MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
                    MD     + +M + GIKPD   Y++L   + +    + A  L   MI  G 
Sbjct: 701 FSKGSEEEKMDA-SPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIARGL 759

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
            P++V +T ++S  CS G MDRAI + ++M   G+ P+ +    L  G  +AR+
Sbjct: 760 QPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVLHRGILKARK 813



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 132/522 (25%), Positives = 218/522 (41%), Gaps = 69/522 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + S   LMN LIE GK   A AI+ +L   G  P+  TY   + AL  +  F     +  
Sbjct: 192 IMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGLNPNDYTYGIFIKALCRKGNFEEAVDVFR 251

Query: 132 QVEENGMDP-----------------------------------DSIFFNAVINAFSESG 156
           ++EE G++P                                   D+  + AVI  F    
Sbjct: 252 EMEEAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEM 311

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            ++EA D F  M   G+ P    Y  LI  Y  AG   ++V L + M   G +K N    
Sbjct: 312 KLKEAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNG-IKTNCVIV 370

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           + +++  C     +E  +   +   SG+  D V YN +  A  + G+ ++A E++ EM+ 
Sbjct: 371 SSILQCLCEMGMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKG 430

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF-------- 328
             +  +      +I+GYC +GK+ +A      MKE G+ P++V +N+L+ GF        
Sbjct: 431 RRMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKE 490

Query: 329 -VEIMDRDG-----------------------VDEVLALMKEFRVNPDVITYSTIMNAWS 364
            +E++D  G                       V E  A +     +  +  YS +++ + 
Sbjct: 491 ALELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE-DKCLENYSAMVDGYC 549

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
            A F  K  E+F  + K GI     +   L      E E +KA  LL  M+     PN +
Sbjct: 550 KANFTRKAYELFSRLSKQGILVKKKSCFKLLSSLCMEGEYDKALILLERMLALDVEPNQI 609

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           ++  +I  +C DG M RA  VFD + E G++P++ T+  ++ GY        A +I   M
Sbjct: 610 MYGKLIGAFCRDGDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDM 669

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTN 526
           K  G+ P   T+ ++ +      L        SK   +E+ +
Sbjct: 670 KERGIKPDVITYTVVLDGHSKVNLKMARSLQFSKGSEEEKMD 711



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 208/468 (44%), Gaps = 47/468 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++  + G   +A A+ N+++  G K + V  +++L  L      + +     +  ++G
Sbjct: 338 LIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSG 397

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D + +N V++A  + G +EEA++   +MK   ++     Y TLI GY + GK  ++ 
Sbjct: 398 IFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAK 457

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            + + M   G ++P++ TYN+LV  +       EA  ++  +   G+KP+  T+N I   
Sbjct: 458 NMFEEMKERG-IEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEG 516

Query: 258 YAQNGEADQAE-------------------------------EVIVEMEHNGVQPNGRTC 286
               G+  +AE                               E+   +   G+    ++C
Sbjct: 517 LCMAGKVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSC 576

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             ++S  C EG+  +AL     M    V PN +++  LI  F    D      V  ++ E
Sbjct: 577 FKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDMLVE 636

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR------ 400
             + PDVITY+ ++N +     + + ++IF+DM + GIKPD   Y+++  G+ +      
Sbjct: 637 RGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITYTVVLDGHSKVNLKMA 696

Query: 401 ---------EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
                    E+E   A      M E G  P+VV +T +I   C   ++  AI ++D+M  
Sbjct: 697 RSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKTNNLQDAINLYDEMIA 756

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
            G+ P++ T+  L+          RA  ++  M   G+ P      +L
Sbjct: 757 RGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAMSVL 804



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 110/473 (23%), Positives = 204/473 (43%), Gaps = 32/473 (6%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ + +  G   EA          G  P +++   L+  L    + +   +I   ++  G
Sbjct: 163 LVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLG 222

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++P+   +   I A    GN EEA+D F +M+E+G+ P   T +T I+G     + +   
Sbjct: 223 LNPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCSHKRSDLGY 282

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           + L  + R  N   +   Y  ++R +C+E  + EA +V   M   G+ PD   Y  +  A
Sbjct: 283 EALRAL-RAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYIYGALIHA 341

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G   QA  +  +M  NG++ N      I+   C+ G   E +   +  ++ G+  +
Sbjct: 342 YCKAGNLLQAVALHNDMVSNGIKTNCVIVSSILQCLCEMGMASEVVDQFKEFRDSGIFLD 401

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V++N+++    ++   +   E+L  MK  R++ DV+ Y+T++  +   G +   K +F+
Sbjct: 402 EVLYNIVVDALCKLGKVEEAVELLNEMKGRRMSLDVVHYTTLIAGYCLQGKLVDAKNMFE 461

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M + GI+PD   Y+IL  G+ R    ++A ELL  +   G  PN      II G C  G
Sbjct: 462 EMKERGIEPDIVTYNILVGGFSRNGLKKEALELLDCIGTQGLKPNSATHNRIIEGLCMAG 521

Query: 438 SMD-------------------------------RAIEVFDKMCEHGVSPNLKTFETLMW 466
            +                                +A E+F ++ + G+    K+   L+ 
Sbjct: 522 KVKEAEAFLNTLEDKCLENYSAMVDGYCKANFTRKAYELFSRLSKQGILVKKKSCFKLLS 581

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
                 +  +A  +L+ M A  V P +  +  L  A    G  K A+ +   +
Sbjct: 582 SLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRDGDMKRAQLVFDML 634



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 116/523 (22%), Positives = 219/523 (41%), Gaps = 80/523 (15%)

Query: 27  GWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERG 86
           G   + PA +    E++ +Y+ SK  DS         ++  + R V     L N      
Sbjct: 28  GLAHLSPAAQYPIAEEQAVYTYSK--DSVGDRF----IDLNTSRVVEIFYNLKN------ 75

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN-----GMDPD 141
           +P  A + F  L E G + ++ TY  L+  L   +    + S++S++  +     G D  
Sbjct: 76  EPNLAWSFFTQLKESGFQHNVDTYAALIRVLCRWRLERKLQSLLSEIVGSKESVLGFDIT 135

Query: 142 SIF---------------------FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
           ++F                      + ++ A+   G  +EA+D  ++ K  G  P   + 
Sbjct: 136 ALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFVPHIMSC 195

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           N L+      GK + +V +   + R G + PN  TY + ++A C + N  EA +V  +M 
Sbjct: 196 NFLMNRLIEHGKIDMAVAIYRHLKRLG-LNPNDYTYGIFIKALCRKGNFEEAVDVFREME 254

Query: 241 ASGMKPDVVT-----------------------------------YNTIATAYAQNGEAD 265
            +G+ P+ VT                                   Y  +   +    +  
Sbjct: 255 EAGVNPNAVTCSTYIEGLCSHKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLK 314

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +AE+V ++M + G+ P+G   G +I  YCK G + +A+     M   G+  N VI + ++
Sbjct: 315 EAEDVFIDMVNEGIAPDGYIYGALIHAYCKAGNLLQAVALHNDMVSNGIKTNCVIVSSIL 374

Query: 326 KGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +   E+       EV+   KEFR   +  D + Y+ +++A    G +++  E+ ++M   
Sbjct: 375 QCLCEM---GMASEVVDQFKEFRDSGIFLDEVLYNIVVDALCKLGKVEEAVELLNEMKGR 431

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
            +  D   Y+ L  GY  + +   A+ +   M E G  P++V +  ++ G+  +G    A
Sbjct: 432 RMSLDVVHYTTLIAGYCLQGKLVDAKNMFEEMKERGIEPDIVTYNILVGGFSRNGLKKEA 491

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +E+ D +   G+ PN  T   ++ G   A +   AE  L  ++
Sbjct: 492 LELLDCIGTQGLKPNSATHNRIIEGLCMAGKVKEAEAFLNTLE 534



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 139/314 (44%), Gaps = 34/314 (10%)

Query: 2   GKFAEGKAFLQT-DDKYQSGSTIVKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHC 60
           GK  E +AFL T +DK     + +  G+      K N   +  +L+S             
Sbjct: 521 GKVKEAEAFLNTLEDKCLENYSAMVDGY-----CKANFTRKAYELFSRLSKQ-------- 567

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
              + K+SC       KL++SL   G+  +A  +   ++    +P+ + Y  L+ A    
Sbjct: 568 GILVKKKSC------FKLLSSLCMEGEYDKALILLERMLALDVEPNQIMYGKLIGAFCRD 621

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
                   +   + E G+ PD I +  +IN +     + EA D F  MKE G+ P   TY
Sbjct: 622 GDMKRAQLVFDMLVERGITPDVITYTMMINGYCRVNCLREARDIFNDMKERGIKPDVITY 681

Query: 181 NTLIKGYGIA------------GKPEESVKLLDLMS--REGNVKPNLRTYNVLVRAWCNE 226
             ++ G+               G  EE +      S  +E  +KP++  Y VL+ + C  
Sbjct: 682 TVVLDGHSKVNLKMARSLQFSKGSEEEKMDASPFWSEMKEMGIKPDVVCYTVLIDSHCKT 741

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
            N+ +A N+  +M A G++PD+VTY  + ++    G+ D+A  ++ EM   G++P+ R  
Sbjct: 742 NNLQDAINLYDEMIARGLQPDIVTYTALLSSCCSRGDMDRAITLVNEMSFKGIEPDSRAM 801

Query: 287 GIIISGYCKEGKIK 300
            ++  G  K  K++
Sbjct: 802 SVLHRGILKARKVQ 815



 Score = 75.5 bits (184), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/329 (19%), Positives = 131/329 (39%), Gaps = 53/329 (16%)

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F ++KESG      TY  LI+   +  +     KL  L+S     K ++  ++       
Sbjct: 84  FTQLKESGFQHNVDTYAALIR---VLCRWRLERKLQSLLSEIVGSKESVLGFD------- 133

Query: 225 NEKNITEAWNVMHKMAASGMKPD----VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
               IT  ++V+ +             ++  + +  AY + G  D+A + + + +  G  
Sbjct: 134 ----ITALFDVLREGGGEVEGEHSSVLILVLDMLVKAYVRVGMFDEAIDALFQTKRRGFV 189

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+  +C  +++   + GKI  A+   R +K  G+                          
Sbjct: 190 PHIMSCNFLMNRLIEHGKIDMAVAIYRHLKRLGL-------------------------- 223

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
                    NP+  TY   + A    G  ++  ++F +M +AG+ P+A   S   +G   
Sbjct: 224 ---------NPNDYTYGIFIKALCRKGNFEEAVDVFREMEEAGVNPNAVTCSTYIEGLCS 274

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
            +  +   E L  +  + +  +   +T +I G+CS+  +  A +VF  M   G++P+   
Sbjct: 275 HKRSDLGYEALRALRAANWPIDTFAYTAVIRGFCSEMKLKEAEDVFIDMVNEGIAPDGYI 334

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGV 489
           +  L+  Y +A    +A  +   M + G+
Sbjct: 335 YGALIHAYCKAGNLLQAVALHNDMVSNGI 363


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/488 (25%), Positives = 218/488 (44%), Gaps = 34/488 (6%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  + C   V + T L+  L  R    +A  + + ++E    P L+TY +L+A       
Sbjct: 284 MKDDCCYPNVYTYTALIKGLC-RKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGH 342

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +S + ++S ++E G+ PD   +   I+   +S  +EEA   F  + E G++     Y+ 
Sbjct: 343 LDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSV 402

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI GY   GK +E+  L + M  + N  PN  T+N L+   C+  N+ EA ++  +M   
Sbjct: 403 LIDGYCKVGKVDEAGCLFEKMLSK-NCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKM 461

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+KP V T+N +     + G+ D A + + +M  +G +P  RT    I  YC  GK++EA
Sbjct: 462 GLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEA 521

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM-- 360
                 MKE GV P+   +  LIK + ++       +VL  M +    P   T+ +++  
Sbjct: 522 EDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQ 581

Query: 361 ----------------------------NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
                                       N W    F D   E+F++M K G  PD+  Y 
Sbjct: 582 LFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMMEF-DIVIELFEEMEKHGCTPDSKCYE 640

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            L  G  + +    A +LL  M + G  P+ ++F  +IS  C       A  + + M   
Sbjct: 641 KLISGICKVENLGIALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICS 700

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           G SP L+  +TL+ G  E  +  R   + + ++  G +  +  + +L +     GL +E 
Sbjct: 701 GHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEF 760

Query: 513 KRILSKIK 520
            ++  +++
Sbjct: 761 SQLFEEME 768



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 206/427 (48%), Gaps = 33/427 (7%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           K SL  Y  LL  L      + ++ + +++ E  +  D   FN +IN + + G ++EA  
Sbjct: 154 KLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQ 213

Query: 164 TFWKMKESGLTPT--TST-----------------------------YNTLIKGYGIAGK 192
              KM ++GL+P   TST                             YN LI G   AG+
Sbjct: 214 FMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVSYNQLIHGLCEAGR 273

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +E+V L   M ++    PN+ TY  L++  C  KN+ +A  ++ +M    + PD++TYN
Sbjct: 274 IDEAVSLFVRM-KDDCCYPNVYTYTALIKGLC-RKNVHKAMGLLDEMLERNLVPDLITYN 331

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++     + G  D A  ++  M+  G+ P+ RT G  I   CK  +++EA R   ++ E 
Sbjct: 332 SLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEE 391

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           GV  N++++++LI G+ ++   D    +   M     +P+  T++ +++   +AG + + 
Sbjct: 392 GVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEA 451

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             +FD M K G+KP  + ++IL    +++ + + A + L  M+ SG  P    +   I  
Sbjct: 452 LSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEV 511

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +CS G +  A ++  +M E GV P+  T+ +L+  Y +    + A ++L+ M      P 
Sbjct: 512 YCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPS 571

Query: 493 KSTFLLL 499
             TFL L
Sbjct: 572 HHTFLSL 578



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/488 (23%), Positives = 203/488 (41%), Gaps = 68/488 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   ++N   + G  +EA+     +I+ G  P   T T+ +      K  +S   +  
Sbjct: 192 IYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFE 251

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK---------------------- 169
           ++       + + +N +I+   E+G ++EA+  F +MK                      
Sbjct: 252 EMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKN 307

Query: 170 ------------ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
                       E  L P   TYN+LI G   AG  + + +LL LM   G V P+ RTY 
Sbjct: 308 VHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLV-PDQRTYG 366

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
             +   C    + EA  +   +   G+  +V+ Y+ +   Y + G+ D+A  +  +M   
Sbjct: 367 CFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSK 426

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
              PN  T   +I G C  G +KEAL     M + G+ P +  FN+LI   ++  D D  
Sbjct: 427 NCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDA 486

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            + L  M      P   TY+  +  + +AG + + +++   M + G+ PD   Y+ L K 
Sbjct: 487 HKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKA 546

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTII------------SGWCSDGSM------ 439
           Y +      A ++L +M ++   P+   F ++I            SG     S+      
Sbjct: 547 YGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDV 606

Query: 440 -----------DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
                      D  IE+F++M +HG +P+ K +E L+ G  +      A ++L  M+  G
Sbjct: 607 PGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEG 666

Query: 489 VHPQKSTF 496
           + P +  F
Sbjct: 667 ISPSEMVF 674



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 185/422 (43%), Gaps = 32/422 (7%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIM-SQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
           K ++ +Y +LL  +   K  + +  I+ S ++     PD++F +                
Sbjct: 98  KHNVDSYASLLTLIDHHKIVSDVPKIIVSMIKCCYSAPDALFVS---------------- 141

Query: 163 DTFWKMKESGLTPTT-STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           D   KM +  +T  +   YN L+      G  +E  +L   M  E  V  ++ T+N+++ 
Sbjct: 142 DICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEF-VSMDIYTFNLMIN 200

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM-EHNGVQ 280
            +C    + EA   M KM  +G+ PD  T  +    Y ++ + D A  V  EM   N V 
Sbjct: 201 VYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRNEVS 260

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
            N      +I G C+ G+I EA+     MK+   +PN+  +  LIKG      R  V + 
Sbjct: 261 YNQ-----LIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLC----RKNVHKA 311

Query: 341 LALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           + L+ E     + PD+ITY++++     AG +D    +   M + G+ PD   Y      
Sbjct: 312 MGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDF 371

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             +    E+A  L  ++ E G   NV++++ +I G+C  G +D A  +F+KM     SPN
Sbjct: 372 LCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPN 431

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
             TF  L+ G   A     A  +   M   G+ P   TF +L       G   +A + L 
Sbjct: 432 AYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQ 491

Query: 518 KI 519
           K+
Sbjct: 492 KM 493



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/360 (23%), Positives = 167/360 (46%), Gaps = 9/360 (2%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ++K       +   L++ L   G  +EA ++F+ +++ G KP++ T+  L+  +  Q  F
Sbjct: 424 LSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDF 483

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +  H  + ++  +G  P +  +NA I  +  +G ++EA D   +MKE G+ P   TY +L
Sbjct: 484 DDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSL 543

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           IK YG  G    +  +L  M  + + +P+  T+  L++   +++ + E      K   +G
Sbjct: 544 IKAYGKLGLTYSAFDVLKSM-FDADCEPSHHTFLSLIKQLFDKRYVVE------KSGETG 596

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++      +   +   +  E D   E+  EME +G  P+ +    +ISG CK   +  AL
Sbjct: 597 VESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIAL 656

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
           +    M++ G+ P+ ++FN +I    ++        ++  M     +P +    T++   
Sbjct: 657 KLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGL 716

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG--FHP 421
              G  ++   +F  +   G   D  A+ IL  G +++   E+  +L   M ++G  F P
Sbjct: 717 YEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSP 776



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/290 (24%), Positives = 131/290 (45%), Gaps = 6/290 (2%)

Query: 234 NVMHKMAASGM-KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
           ++  KM+   + K  +  YN + T  A+ G  D+  ++  EM    V  +  T  ++I+ 
Sbjct: 142 DICRKMSKDDITKLSLKCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINV 201

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
           YCK G +KEA +F   M + G+ P+       I G+    D D    V   M     N +
Sbjct: 202 YCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMP----NRN 257

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
            ++Y+ +++    AG +D+   +F  M      P+ + Y+ L KG  R +   KA  LL 
Sbjct: 258 EVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLLD 316

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M+E    P+++ + ++I+G C  G +D A  +   M E G+ P+ +T+   +    ++ 
Sbjct: 317 EMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSN 376

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +   A  +   +   GV      + +L +     G   EA  +  K+ +K
Sbjct: 377 RVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSK 426


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/484 (24%), Positives = 221/484 (45%), Gaps = 71/484 (14%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           PS+  Y  LL + T + R + +  +   +  +G+ P++  FN +I    +SG +++A + 
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F KM E G  P   ++  L++GY  AG   + ++LL  M R G   PN   YN L+ ++C
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLG-FSPNKVVYNTLISSFC 137

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV----Q 280
            E    +A  ++ +M   G+ PDVVT+N   +A   +G+  +A  +  +M+ + V    Q
Sbjct: 138 KEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ 197

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMK------------------------------ 310
           PN  T  +++ G+CKEG ++EA      MK                              
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLV 257

Query: 311 -----EYGVHPNLVIFNLLIKGFVEIMDRDGV----DEVLALMKEFRVNPDVITYSTIMN 361
                + G+ PN+  +N+++ G      ++GV      ++ LM    V PD +TY+T+++
Sbjct: 258 LKEMVDMGMEPNVYSYNIVMDGLC----KNGVLFDARMLMRLMTSSGVLPDTVTYTTLLH 313

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +   G + +   +  +M + G  P+ +  +IL     +E    +AEELL  M E G+  
Sbjct: 314 GYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVI 373

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS-----------------------PNL 458
           + V    +I G C++G +D+AIE+ + M  HG +                       P+L
Sbjct: 374 DTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDL 433

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            ++ T++ G  +A +   A++    M    + P  + + +   +    G    A R+L  
Sbjct: 434 ISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKD 493

Query: 519 IKNK 522
           ++ K
Sbjct: 494 MEKK 497



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 215/455 (47%), Gaps = 34/455 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS--QVEE 135
           L++S  + GK  +A+ + + + + G  P +VT+   ++AL    +      I    Q++E
Sbjct: 132 LISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDE 191

Query: 136 N-GM-DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             G+  P+ I +N ++  F + G +EEA   F KMK S       +YN  + G    GK 
Sbjct: 192 VLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKL 251

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+  +L  M   G ++PN+ +YN+++   C    + +A  +M  M +SG+ PD VTY T
Sbjct: 252 LEAQLVLKEMVDMG-MEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTT 310

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y   G+  +A  V+ EM  +G  PN  TC I++    KEG+I EA    + M E G
Sbjct: 311 LLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKG 370

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALM-----------------------KEFRVN 350
              + V  N++I G       D   E++  M                          +  
Sbjct: 371 YVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCM 430

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           PD+I+YSTI++    AG + + K+ F +M    ++PD+  Y +    + +E +   A  +
Sbjct: 431 PDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRV 490

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF---DKMCEHGVSPNLKTFETLMWG 467
           L  M + G +  +  + ++I G    GS ++  E++   D+M E GVSP++  +  ++  
Sbjct: 491 LKDMEKKGCNKTLQTYNSLIMGL---GSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSS 547

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
             E  +   A  +L  M   G+ P  S+F +L +A
Sbjct: 548 LCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKA 582



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 188/359 (52%), Gaps = 14/359 (3%)

Query: 139 DPDSIF-FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +P SI+ +N ++ + ++ G ++        M  SG++P T T+N LI     +G  +++ 
Sbjct: 17  NPPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAR 76

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L D M  +G  +PN  ++ +LVR +C     ++   ++ +M   G  P+ V YNT+ ++
Sbjct: 77  ELFDKMPEKG-CEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISS 135

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV--- 314
           + + G+ D AE+++ EM  +G+ P+  T    IS  C  GK+ EA R  R M+   V   
Sbjct: 136 FCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGL 195

Query: 315 -HPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVNPDVI---TYSTIMNAWSTAGFM 369
             PN++ +NL++ GF     ++G ++E  AL ++ +V+ +++   +Y+  +      G +
Sbjct: 196 PQPNIITYNLMLGGFC----KEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKL 251

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            + + +  +M   G++P+ ++Y+I+  G  +      A  L+  M  SG  P+ V +TT+
Sbjct: 252 LEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTL 311

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           + G+C  G +  A  V  +M   G SPN  T   L++   +  +   AEE+LQ M   G
Sbjct: 312 LHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKG 370



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 105/452 (23%), Positives = 199/452 (44%), Gaps = 57/452 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   +M+ L + G   +A+ +   +   G  P  VTYTTLL       + +  ++++ 
Sbjct: 270 VYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLR 329

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G  P++   N ++ +  + G + EA +   KM E G    T T N +I G    G
Sbjct: 330 EMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNG 389

Query: 192 KPEESVKLLDLMSREGNVK-PNL-RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           K ++++++++ M   G+    NL  +Y  LV    + K                  PD++
Sbjct: 390 KLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCM---------------PDLI 434

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +Y+TI +   + G   +A++  +EM    +QP+     + I  +CKEGKI  A R  + M
Sbjct: 435 SYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDM 494

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTA 366
           ++ G +  L  +N LI G   +  ++ + E+  L+ E R   V+PDV  Y+ ++++    
Sbjct: 495 EKKGCNKTLQTYNSLIMG---LGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEG 551

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE------------------------- 401
           G +     + D+M + GI P+  ++SIL K + +                          
Sbjct: 552 GRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHKEALYS 611

Query: 402 ---------QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
                     E  KA+EL  T ++  F     ++  +I   C D  +D A  +  K+ + 
Sbjct: 612 LTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGILHKLIDK 671

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           G   +  +F  ++ G  +      A+E+ + M
Sbjct: 672 GYWFDPASFMPVIDGLGKRGNKHEADELAEKM 703



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/400 (23%), Positives = 177/400 (44%), Gaps = 27/400 (6%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++     GK  EA  +   ++  G  P+  T   LL +L  + R +    ++ ++ E
Sbjct: 309 TTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNE 368

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDT---FWKMKESGL------------------- 173
            G   D++  N VI+    +G +++A++     W    + L                   
Sbjct: 369 KGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKK 428

Query: 174 -TPTTSTYNTLIKGYGIAGKPEESVK-LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE 231
             P   +Y+T+I G   AG+  E+ K  +++M +  N++P+   Y+V + ++C E  I+ 
Sbjct: 429 CMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGK--NLQPDSAIYDVFIHSFCKEGKISS 486

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS 291
           A+ V+  M   G    + TYN++        +  +   +I EM   GV P+      ++S
Sbjct: 487 AFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLS 546

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
             C+ G++K+A      M + G+ PN+  F++LIK F +  D   VDE+  +      + 
Sbjct: 547 SLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALNVCGHK 606

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           + + YS   N     G + K KE+F+             Y  L     ++++ + A  +L
Sbjct: 607 EAL-YSLTFNELLVGGEVVKAKELFETALDRSFDVGNFLYKDLIDHLCKDEKLDDASGIL 665

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
             +I+ G+  +   F  +I G    G+   A E+ +KM E
Sbjct: 666 HKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMME 705



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 80/173 (46%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P +  Y+ ++ + +  G +D    +  DM  +G+ P+ + +++L          + A EL
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
              M E G  PN   F  ++ G+C  G   + +E+  +M   G SPN   + TL+  + +
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
             +   AE+++  M+  G+ P   TF     A  ++G   EA RI   ++  E
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDE 191


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 126/530 (23%), Positives = 231/530 (43%), Gaps = 79/530 (14%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +RS + L+  L+++G+ + A  +F+ ++  G  P +   + ++ A     R +    ++ 
Sbjct: 191 LRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLE 250

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G++P+ + +N ++N +   G+ E        M E G++    T   L++GY   G
Sbjct: 251 KMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKG 310

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E+ KLL  +  +  +  + R Y VLV  +C    + +A  +  +M   G+K ++V  
Sbjct: 311 KMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVIC 370

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   Y + G+  +AE V V M    ++P+  +   ++ GYC+EGK+ +A      M  
Sbjct: 371 NTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLG 430

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P +V +N +IKG V++   D    +  LM E  V P+ I+  T+++ +   G  D+
Sbjct: 431 DGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDR 490

Query: 372 ---------------------------CK--------EIFDDMGKAGIKPDAHAYSILAK 396
                                      CK         +FD M + G+ PD   Y  L+ 
Sbjct: 491 AMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSD 550

Query: 397 GYVREQEPEKA-----------------------------------EELLMTMIESGFHP 421
           GY +    ++A                                    +LL+ M   G  P
Sbjct: 551 GYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSP 610

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           NVV + T+ISGWC +  +D+A  ++ +M E G +PN+     ++       +   A  IL
Sbjct: 611 NVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVIL 670

Query: 482 QIMKAF---GVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEM 528
             M  F    VH + S  L+         LT EA++I   +   +  N +
Sbjct: 671 DKMLDFDILAVHNKCSDKLV------KNDLTLEAQKIADSLDKSDICNSL 714



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 118/504 (23%), Positives = 220/504 (43%), Gaps = 60/504 (11%)

Query: 71  TVRSMTKLMNSLIERGK--PQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIH 127
           T +    L +SL+ R +  P    + F+   +  H +P  ++Y+ LL  LT  + F    
Sbjct: 62  TFKYSDHLTDSLLRRLRLHPSACLSFFHLATQNSHYRPHSLSYSILLHILTHARLFPEAT 121

Query: 128 SIMSQVEE----NGMDPDSI----------------FFNAVINAFSESGNMEEAMDTFWK 167
           +++ Q+ +    N     ++                 F+ ++ AF+E G  + A+  F +
Sbjct: 122 TVLRQLMDLHCTNNYRAYAVCNHVFSVYKEFGFCSGVFDMLMKAFAERGMTKHALYVFDE 181

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M   G  P   + + L+      G+   +V + D +   G V P++   +++V A C   
Sbjct: 182 MSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTGIV-PDVYMCSIVVNAHCQVG 240

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC- 286
            +  A  V+ KM   G++P+VVTYN +   Y   G+ +  E V+  M   GV  N  TC 
Sbjct: 241 RVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCT 300

Query: 287 -----------------------------------GIIISGYCKEGKIKEALRFARTMKE 311
                                              G+++ GYC+ G++++A+R    M  
Sbjct: 301 MLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLR 360

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  N+VI N LIKG+ ++      + V   M ++ + PD  +Y+T+++ +   G + K
Sbjct: 361 VGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSK 420

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + ++M   GI P    Y+ + KG V     + A  L   M+E G  PN +   T++ 
Sbjct: 421 AFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLD 480

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            +   G  DRA+ ++ ++   G + +   F T++ G  +  +   A  +   MK  G+ P
Sbjct: 481 CFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSP 540

Query: 492 QKSTFLLLAEARRATGLTKEAKRI 515
            + T+  L++     G  +EA +I
Sbjct: 541 DEITYRTLSDGYCKNGNVQEAFQI 564



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 100/423 (23%), Positives = 194/423 (45%), Gaps = 36/423 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   ++  L++ G   +A  +++ ++E G  P+ ++  T+L         +    + 
Sbjct: 436 TVVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLW 495

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G    ++ FN +I+   + G + EA   F +MKE GL+P   TY TL  GY   
Sbjct: 496 KEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKN 555

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +E+ ++  +M R+  +  ++  YN L+      + + +  +++ +M   G+ P+VVT
Sbjct: 556 GNVQEAFQIKGVMERQA-MSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVT 614

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+ + +    + D+A  +  EM   G  PN   C  I+S   ++ +I EA      M 
Sbjct: 615 YGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKML 674

Query: 311 EY---GVH--------------------------------PNLVIFNLLIKGFVEIMDRD 335
           ++    VH                                 N +++N+ I G  +    D
Sbjct: 675 DFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLD 734

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
               VL+++      PD  TY T+++A S +G +D+  ++ D+M + G+ P+   Y+ L 
Sbjct: 735 EARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALI 794

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G  +    ++A+ L   + + G  PN V +  +I  +C  G +D+A  + +KM E G+S
Sbjct: 795 NGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGIS 854

Query: 456 PNL 458
             +
Sbjct: 855 TRI 857



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/451 (23%), Positives = 200/451 (44%), Gaps = 36/451 (7%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L++     GK  +A  +   ++  G  P++VTY T++  L     ++    +   +
Sbjct: 404 SYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWHLM 463

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            E G+ P+ I    +++ F + G+ + AM  + ++   G T +T  +NT+I G    GK 
Sbjct: 464 VERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKL 523

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+  + D M +E  + P+  TY  L   +C   N+ EA+ +   M    M   +  YN+
Sbjct: 524 MEAGAVFDRM-KELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNS 582

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     +  + +   +++VEM+  G+ PN  T G +ISG+C E K+ +A      M E G
Sbjct: 583 LIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERG 642

Query: 314 VHPNLVIFNLLIKGFVE---------IMDRDGVDEVLALMKEFR---VNPDV-------- 353
             PN+V+ + ++              I+D+    ++LA+  +     V  D+        
Sbjct: 643 FTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIA 702

Query: 354 ---------------ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
                          I Y+  ++    +G +D+ + +   +   G  PD   Y  L    
Sbjct: 703 DSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHAC 762

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
                 ++A +L   M+E G  PN+ I+  +I+G C  G++DRA  +F K+ + G+ PN 
Sbjct: 763 SVSGNVDEAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNA 822

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            T+  L+  Y       +A  + + M   G+
Sbjct: 823 VTYNILIGCYCRIGDLDKASRLREKMTEEGI 853



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 87/389 (22%), Positives = 164/389 (42%), Gaps = 42/389 (10%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   +++   + G    A  ++  ++  G   S V + T+++ L    +     ++  ++
Sbjct: 474 SCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRM 533

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +E G+ PD I +  + + + ++GN++EA      M+   ++ +   YN+LI G     K 
Sbjct: 534 KELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKL 593

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            +   LL  M   G + PN+ TY  L+  WC+E+ + +A+++  +M   G  P+VV  + 
Sbjct: 594 NDVTDLLVEMQTRG-LSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSK 652

Query: 254 IATAYAQNGEADQAEEVIVEM-------EHNGVQ-------------------------- 280
           I ++  ++    +A  ++ +M        HN                             
Sbjct: 653 IVSSLYRDDRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEAQKIADSLDKSDICN 712

Query: 281 --PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
              N     I I G CK GK+ EA      +   G  P+   +  LI           VD
Sbjct: 713 SLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHA---CSVSGNVD 769

Query: 339 EVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
           E   L   M E  + P++  Y+ ++N     G +D+ + +F  + + G+ P+A  Y+IL 
Sbjct: 770 EAFKLRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILI 829

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVV 424
             Y R  + +KA  L   M E G    ++
Sbjct: 830 GCYCRIGDLDKASRLREKMTEEGISTRII 858


>gi|356497981|ref|XP_003517834.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 543

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 214/446 (47%), Gaps = 2/446 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++N L          ++   + + G +PS+VT+TT++  L ++         + 
Sbjct: 61  VSTHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVD 120

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +++ G + D     A+IN   + G+   A+    KM+E       + Y+ ++ G    G
Sbjct: 121 HLKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDG 180

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E++ L   M+ +G ++PNL TYN L+   CN     EA  ++  M   G+ PDV T+
Sbjct: 181 MVFEALDLFSQMTGKG-IQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTF 239

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N IA  + + G   +A+ +   M H G++ N  T   II  +C   ++K+A+     M  
Sbjct: 240 NVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIR 299

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PN+V +N LI G+ E  + +     L  M    ++PDV+T+ST++  +  AG    
Sbjct: 300 KGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVA 359

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            KE+F  M K G  PD    +I+  G  +     +A  L   + +     +++I++ I++
Sbjct: 360 AKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELEKMNSDLDIIIYSIILN 419

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G CS G ++ A+E+F  +   GV  ++ T+  ++ G  +      AE++L  M+  G  P
Sbjct: 420 GMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMINGLCKEGLLDDAEDLLMKMEENGCPP 479

Query: 492 QKSTFLLLAEA-RRATGLTKEAKRIL 516
            + T+ +  +   R   ++K  K ++
Sbjct: 480 DECTYNVFVQGLLRRYEISKSTKYLM 505



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/384 (26%), Positives = 197/384 (51%), Gaps = 3/384 (0%)

Query: 64  MNKESCRT-VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +++C   V + + +++ L + G   EA  +F+ +   G +P+L TY  L+  L    R
Sbjct: 157 MEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDR 216

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +     +++ +   G+ PD   FN +   F ++G +  A   F  M   G+     TYN+
Sbjct: 217 WKEAAPLLANMMRKGIMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNS 276

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I  + +  + ++++++ DLM R+G + PN+ TYN L+  WC  KN+ +A   + +M  +
Sbjct: 277 IIGAHCMLNQMKDAMEVFDLMIRKGCL-PNIVTYNSLIHGWCETKNMNKAMYFLGEMVNN 335

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ PDVVT++T+   + + G+   A+E+   M  +G  P+ +TC II+ G  K     EA
Sbjct: 336 GLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEA 395

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           +   R +++     +++I+++++ G       +   E+ + +    V  DV+TY+ ++N 
Sbjct: 396 MSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMING 455

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G +D  +++   M + G  PD   Y++  +G +R  E  K+ + LM M   GF  N
Sbjct: 456 LCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFRAN 515

Query: 423 VVIFTTIISGWCSDGSMDRAIEVF 446
               T ++  + S    +RA +VF
Sbjct: 516 ATT-TKLLINYFSANKENRAFQVF 538



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/449 (25%), Positives = 207/449 (46%), Gaps = 1/449 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ + T ++N L   G   +A    ++L + G++    T   ++  L      ++  S +
Sbjct: 95  SIVTFTTIVNGLCVEGNVAQAIRFVDHLKDMGYESDRYTRGAIINGLCKVGHSSAALSYL 154

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++EE   + D   ++AV++   + G + EA+D F +M   G+ P   TYN LI G    
Sbjct: 155 KKMEEQNCNLDVTAYSAVVDGLCKDGMVFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNF 214

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            + +E+  LL  M R+G + P+++T+NV+   +     I+ A ++   M   G++ +VVT
Sbjct: 215 DRWKEAAPLLANMMRKG-IMPDVQTFNVIAGRFLKTGMISRAKSIFSFMGHMGIEHNVVT 273

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN+I  A+    +   A EV   M   G  PN  T   +I G+C+   + +A+ F   M 
Sbjct: 274 YNSIIGAHCMLNQMKDAMEVFDLMIRKGCLPNIVTYNSLIHGWCETKNMNKAMYFLGEMV 333

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P++V ++ LI GF +        E+  +M +    PD+ T + I++      F  
Sbjct: 334 NNGLDPDVVTWSTLIGGFCKAGKPVAAKELFFVMHKHGQLPDLQTCAIILDGLFKCHFHS 393

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +F ++ K     D   YSI+  G     +   A EL   +   G   +VV +  +I
Sbjct: 394 EAMSLFRELEKMNSDLDIIIYSIILNGMCSSGKLNDALELFSYLSSKGVKIDVVTYNIMI 453

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G C +G +D A ++  KM E+G  P+  T+   + G     +  ++ + L  MK  G  
Sbjct: 454 NGLCKEGLLDDAEDLLMKMEENGCPPDECTYNVFVQGLLRRYEISKSTKYLMFMKGKGFR 513

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
              +T  LL     A    +  +  L K 
Sbjct: 514 ANATTTKLLINYFSANKENRAFQVFLQKF 542



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 105/421 (24%), Positives = 188/421 (44%), Gaps = 48/421 (11%)

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE---SVKLLDLMSREGNVKPNL 213
           +++ A+D + KM      P    +N L   +GI  K +    ++ L+  MS  G VKPN+
Sbjct: 6   SVDVALDFYHKMVTMKPFPCVKDFNLL---FGIVAKMKHYTTAISLIKHMSYIG-VKPNV 61

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            T+N+++   C   +    ++V+  M   G++P +VT+ TI       G   QA   +  
Sbjct: 62  STHNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDH 121

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY--------------------- 312
           ++  G + +  T G II+G CK G    AL + + M+E                      
Sbjct: 122 LKDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGM 181

Query: 313 --------------GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
                         G+ PNL  +N LI G            +LA M    + PDV T++ 
Sbjct: 182 VFEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNV 241

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           I   +   G + + K IF  MG  GI+ +   Y+ +   +    + + A E+   MI  G
Sbjct: 242 IAGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKG 301

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PN+V + ++I GWC   +M++A+    +M  +G+ P++ T+ TL+ G+ +A +P  A+
Sbjct: 302 CLPNIVTYNSLIHGWCETKNMNKAMYFLGEMVNNGLDPDVVTWSTLIGGFCKAGKPVAAK 361

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVES 538
           E+  +M   G  P   T  ++ +         EA  +  +++      +M ++ DI + S
Sbjct: 362 ELFFVMHKHGQLPDLQTCAIILDGLFKCHFHSEAMSLFRELE------KMNSDLDIIIYS 415

Query: 539 L 539
           +
Sbjct: 416 I 416



 Score = 96.7 bits (239), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 120/307 (39%), Gaps = 35/307 (11%)

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
           N K++  A +  HKM      P V  +N +    A+      A  +I  M + GV+PN  
Sbjct: 3   NVKSVDVALDFYHKMVTMKPFPCVKDFNLLFGIVAKMKHYTTAISLIKHMSYIGVKPNVS 62

Query: 285 TCGI-----------------------------------IISGYCKEGKIKEALRFARTM 309
           T  I                                   I++G C EG + +A+RF   +
Sbjct: 63  THNIVINCLCRLNHTVFGFSVLGLMFKIGVEPSIVTFTTIVNGLCVEGNVAQAIRFVDHL 122

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           K+ G   +      +I G  ++         L  M+E   N DV  YS +++     G +
Sbjct: 123 KDMGYESDRYTRGAIINGLCKVGHSSAALSYLKKMEEQNCNLDVTAYSAVVDGLCKDGMV 182

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +  ++F  M   GI+P+   Y+ L  G       ++A  LL  M+  G  P+V  F  I
Sbjct: 183 FEALDLFSQMTGKGIQPNLFTYNCLIHGLCNFDRWKEAAPLLANMMRKGIMPDVQTFNVI 242

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
              +   G + RA  +F  M   G+  N+ T+ +++  +    Q   A E+  +M   G 
Sbjct: 243 AGRFLKTGMISRAKSIFSFMGHMGIEHNVVTYNSIIGAHCMLNQMKDAMEVFDLMIRKGC 302

Query: 490 HPQKSTF 496
            P   T+
Sbjct: 303 LPNIVTY 309


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 199/400 (49%), Gaps = 4/400 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++N L + GK ++A+     +   G KP++VTY TL+   +++ R      I+S
Sbjct: 226 VYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIIS 285

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++  G  PD   +N +++     G   E +    +MK  GL P + +YN LI+G    G
Sbjct: 286 EMKSKGFQPDLQTYNPILSWMCNEGRASEVL---REMKGIGLVPDSVSYNILIRGCSNNG 342

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             E +    D M ++G V P   TYN L+     E  I  A  ++ ++   G+  D VTY
Sbjct: 343 DLETAFAYRDEMVKQGMV-PTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTY 401

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   Y Q+G+A +A  +  EM  +G++P   T   +I   C+  K +EA      +  
Sbjct: 402 NIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVG 461

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+ P+LV+ N L+ G     + D    +L  M    ++PD +TY+ +M      G  ++
Sbjct: 462 KGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEE 521

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +E+  +M + GIKPD  +Y+ L  GY ++ + + A  +   M+  GF+P ++ +  ++ 
Sbjct: 522 ARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLK 581

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
           G   +   + A E+  +M   G+ PN  +F +++   S++
Sbjct: 582 GLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKS 621



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 209/448 (46%), Gaps = 39/448 (8%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           EA   F  + E G  P   T   +L+ L+   R  +     + +    +  +   FN +I
Sbjct: 174 EAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRMEIKSNVYTFNIMI 233

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N   + G +++A      M+  G+ PT  TYNTL++GY + G+ E +  ++  M  +G  
Sbjct: 234 NVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKG-F 292

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +P+L+TYN ++   CNE   +E   V+ +M   G+ PD V+YN +    + NG+ + A  
Sbjct: 293 QPDLQTYNPILSWMCNEGRASE---VLREMKGIGLVPDSVSYNILIRGCSNNGDLETAFA 349

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
              EM   G+ P   T   +I G   E KI+ A    R ++E G+  + V +N++I G+ 
Sbjct: 350 YRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYC 409

Query: 330 EIMD------------RDGV-----------------------DEVLALMKEFRVNPDVI 354
           +  D             DG+                       DE+   +    + PD++
Sbjct: 410 QHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLV 469

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
             +T+M+     G MD+   +  +M +  I PD   Y+ L +G   E + E+A EL+  M
Sbjct: 470 MMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEM 529

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
              G  P+ + + T+ISG+   G    A  V D+M   G +P L T+  L+ G S+ +  
Sbjct: 530 KRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNALLKGLSKNQDG 589

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEA 502
             AEE+L+ MK+ G+ P  S+F  + EA
Sbjct: 590 ELAEELLREMKSEGIVPNDSSFCSVIEA 617



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 116/441 (26%), Positives = 203/441 (46%), Gaps = 44/441 (9%)

Query: 111 TTLLAALTIQKRFNSIHSIMSQV---EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
            T L    +  R NS+  +  ++    +      +I F+ ++  + +   ++EA++ F+ 
Sbjct: 122 VTQLLKEVVSTRKNSVRDLFDELVLAHDRLQTKSTILFDFMVRFYCQLRMVDEAIECFYL 181

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEES-VKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
           MKE G  P T T N ++       + E + V   D+   E  +K N+ T+N+++   C E
Sbjct: 182 MKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRME--IKSNVYTFNIMINVLCKE 239

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
             + +A   +  M + G+KP +VTYNT+   Y+  G  + A  +I EM+  G QP+ +T 
Sbjct: 240 GKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTY 299

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG------------FVEIMDR 334
             I+S  C EG+  E LR    MK  G+ P+ V +N+LI+G            + + M +
Sbjct: 300 NPILSWMCNEGRASEVLR---EMKGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVK 356

Query: 335 DG--------------------VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDK 371
            G                    ++    L++E R   +  D +TY+ ++N +   G   K
Sbjct: 357 QGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKK 416

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + D+M   GIKP    Y+ L     R  +  +A+EL   ++  G  P++V+  T++ 
Sbjct: 417 AFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMD 476

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C+ G+MDRA  +  +M    + P+  T+  LM G     +   A E++  MK  G+ P
Sbjct: 477 GHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKP 536

Query: 492 QKSTFLLLAEARRATGLTKEA 512
              ++  L       G TK A
Sbjct: 537 DHISYNTLISGYSKKGDTKHA 557


>gi|125559009|gb|EAZ04545.1| hypothetical protein OsI_26694 [Oryza sativa Indica Group]
          Length = 784

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 219/445 (49%), Gaps = 5/445 (1%)

Query: 80  NSLI----ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           N+LI     R   +EA  +F+ +   G +P  VT+ +LL      +R +    ++ ++E 
Sbjct: 247 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P  + +N++I+++ + G +E+A+    +M+  G+ P   TY TLI G   AGK + 
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDA 366

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++   D M R G  KPNL TYN L++         E   V  ++ ++G  PD+VT+NT+ 
Sbjct: 367 AIVEYDEMVRNG-CKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLL 425

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + QNG   +   V  EM+  G  P   T   +IS Y + G    A++  + M E G++
Sbjct: 426 AVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY 485

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++  +N ++         +  +++ A M+E    PD  +YS++++A++ A  +DK K +
Sbjct: 486 PDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKAL 545

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            DD+    I+P       L     +     +AE+  + + +     ++ +   ++S +  
Sbjct: 546 SDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGK 605

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +  + +  ++   M E  ++ +  T+ +LM  YS      + E IL  +K+ GV P + +
Sbjct: 606 NRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYS 665

Query: 496 FLLLAEARRATGLTKEAKRILSKIK 520
           +  +  A    G  KEA R+ S++K
Sbjct: 666 YNTVIYAYGRKGQMKEASRLFSEMK 690



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 206/433 (47%), Gaps = 36/433 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   L++S ++ G  ++A A+   +   G KP +VTYTTL++ L    + ++     
Sbjct: 312 SVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEY 371

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  NG  P+   +NA+I      G   E M  F +++ +G  P   T+NTL+  +G  
Sbjct: 372 DEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQN 431

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E   +   M + G + P   TY  L+ ++        A  +  +M  +G+ PDV T
Sbjct: 432 GLDSEVSGVFKEMKKAGYI-PERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 490

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN + +A A+ G  +QAE++  EME    +P+  +   ++  Y    ++ +    +  + 
Sbjct: 491 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY 550

Query: 311 EYGVHPN------LVIFNLLI-------KGFVEIMDR----------------------D 335
              + P+      LV+ N  +       K F+E+  +                       
Sbjct: 551 SERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVR 610

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
            V+++L+LMKE  +N    TY+++M+ +S  G  +KC+ I  ++  +G++PD ++Y+ + 
Sbjct: 611 KVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVI 670

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
             Y R+ + ++A  L   M  SG  P+VV +   +  + S+   + AIE+   M   G  
Sbjct: 671 YAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCK 730

Query: 456 PNLKTFETLMWGY 468
           PN +T+ +++ GY
Sbjct: 731 PNERTYNSIVEGY 743



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/488 (23%), Positives = 233/488 (47%), Gaps = 45/488 (9%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIMSQ 132
           + T L+++    G+ ++A A+F  +++ G +P++VTY  +L   + +   +  +  +++ 
Sbjct: 174 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 233

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           ++E+G+ PD   +N +I+        +EA   F +MK SG  P   T+N+L+  YG A +
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +E+++++  M R G   P++ TYN L+ ++  +  + +A  +  +M   G+KPDVVTY 
Sbjct: 294 HDEAIEVIQEMERVG-CPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDVVTYT 352

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+ +   + G+ D A     EM  NG +PN  T   +I  +   GK  E +     ++  
Sbjct: 353 TLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDELRSA 412

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
           G  P++V +N L+  F     ++G+D EV  + KE +     P+  TY ++++++S  G 
Sbjct: 413 GFVPDIVTWNTLLAVF----GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 468

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            D   +I+  M +AGI PD   Y+ +     R    E+AE+L   M E    P+   +++
Sbjct: 469 FDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSS 528

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSP-------------------------------- 456
           ++  + +   +D+   + D +    + P                                
Sbjct: 529 LLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKR 588

Query: 457 ---NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
              ++     ++  Y + R   + E+IL +MK   ++   +T+  L       G  ++ +
Sbjct: 589 CSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCE 648

Query: 514 RILSKIKN 521
            IL++IK+
Sbjct: 649 NILTEIKS 656



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 199/407 (48%), Gaps = 27/407 (6%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP-EESVK 198
           PD+  + A+++AFS +G   +A+  F +M +SG+ P   TYN ++  Y     P +E V+
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           L+  M   G V P+  TYN L+          EA  V  +M ASG +PD VT+N++   Y
Sbjct: 230 LVASMKEHG-VAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 288

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
            +    D+A EVI EME  G  P+  T   +IS Y K+G +++A+   + M+  G+ P++
Sbjct: 289 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGIKPDV 348

Query: 319 VIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKE 374
           V +  LI G    +DR G +D  +    E   N   P++ TY+ ++      G   +   
Sbjct: 349 VTYTTLISG----LDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMA 404

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           +FD++  AG  PD   ++ L   + +     +   +   M ++G+ P    + ++IS + 
Sbjct: 405 VFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYS 464

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
             G  D A++++ +M E G+ P++ T+  ++   +   +  +AE++   M+     P + 
Sbjct: 465 RCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEY 524

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEA-EEDIPVESLE 540
           ++                  +L    N +R ++M+A  +DI  E +E
Sbjct: 525 SY----------------SSLLHAYANAKRLDKMKALSDDIYSERIE 555



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 182/367 (49%), Gaps = 5/367 (1%)

Query: 80  NSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           N+LI+    RGK  E  A+F+ L   G  P +VT+ TLLA        + +  +  ++++
Sbjct: 387 NALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKK 446

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P+   + ++I+++S  G  + AM  + +M E+G+ P  STYN ++      G+ E+
Sbjct: 447 AGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQ 506

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + KL   M  E + KP+  +Y+ L+ A+ N K + +   +   + +  ++P      T+ 
Sbjct: 507 AEKLFAEME-ERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLV 565

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              ++     +AE+  +E+       +      ++S Y K   +++  +    MKE  ++
Sbjct: 566 LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAIN 625

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            +   +N L+  +  + D +  + +L  +K   V PD  +Y+T++ A+   G M +   +
Sbjct: 626 LSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRL 685

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F +M  +G+KPD   Y+I  K YV     E+A EL+  M+  G  PN   + +I+ G+C 
Sbjct: 686 FSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 745

Query: 436 DGSMDRA 442
           +G +  A
Sbjct: 746 NGKLTDA 752



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 192/384 (50%), Gaps = 22/384 (5%)

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           I   + +G + EA      + ++   P    Y  L+  +  AG+  ++V +   M   G 
Sbjct: 148 IRVMARAGRLAEAS----ALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSG- 202

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS----GMKPDVVTYNTIATAYAQNGEA 264
           V+P + TYNV++  +     +   W  + ++ AS    G+ PD  TYNT+ +   +    
Sbjct: 203 VQPAIVTYNVVLHVY---SKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALY 259

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A +V  EM+ +G +P+  T   ++  Y K  +  EA+   + M+  G  P++V +N L
Sbjct: 260 KEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSL 319

Query: 325 IKGFVEIMDRDGV-DEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           I  +V    +DG+ ++ +AL +E  V    PDV+TY+T+++    AG +D     +D+M 
Sbjct: 320 ISSYV----KDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMV 375

Query: 381 KAGIKPDAHAYSILAKGY-VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
           + G KP+   Y+ L K + VR + PE    +   +  +GF P++V + T+++ +  +G  
Sbjct: 376 RNGCKPNLCTYNALIKMHGVRGKFPEMMA-VFDELRSAGFVPDIVTWNTLLAVFGQNGLD 434

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
                VF +M + G  P   T+ +L+  YS       A +I + M   G++P  ST+  +
Sbjct: 435 SEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAV 494

Query: 500 AEARRATGLTKEAKRILSKIKNKE 523
             A    G  ++A+++ ++++ ++
Sbjct: 495 LSALARGGRWEQAEKLFAEMEERD 518



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/339 (25%), Positives = 155/339 (45%), Gaps = 6/339 (1%)

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           T I+    AG+  E+  LLD         P+   Y  LV A+       +A  V  +M  
Sbjct: 146 TAIRVMARAGRLAEASALLD-----AAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVD 200

Query: 242 SGMKPDVVTYNTIATAYAQNGEA-DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
           SG++P +VTYN +   Y++      +  E++  M+ +GV P+  T   +IS   +    K
Sbjct: 201 SGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYK 260

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           EA +    MK  G  P+ V FN L+  + +    D   EV+  M+     P V+TY++++
Sbjct: 261 EAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLI 320

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           +++   G +++   +  +M   GIKPD   Y+ L  G  R  + + A      M+ +G  
Sbjct: 321 SSYVKDGLLEQAVALKQEMEVKGIKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCK 380

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN+  +  +I      G     + VFD++   G  P++ T+ TL+  + +         +
Sbjct: 381 PNLCTYNALIKMHGVRGKFPEMMAVFDELRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGV 440

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + MK  G  P++ T++ L  +    GL   A +I  ++
Sbjct: 441 FKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRM 479



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 38/280 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++++L   G+ ++A+ +F  + E   KP   +Y++LL A    KR + + ++  
Sbjct: 488 VSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSD 547

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK------------------------ 167
            +    ++P +     ++   S+  N+ EA   F +                        
Sbjct: 548 DIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNR 607

Query: 168 -----------MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
                      MKES +  + +TYN+L+  Y   G  E+   +L  +   G V+P+  +Y
Sbjct: 608 MVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSG-VRPDRYSY 666

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N ++ A+  +  + EA  +  +M  SG+KPDVVTYN    +Y  N   ++A E++  M  
Sbjct: 667 NTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVT 726

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            G +PN RT   I+ GYC+ GK+ +A  F   + +  +HP
Sbjct: 727 QGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ--LHP 764


>gi|225445998|ref|XP_002267263.1| PREDICTED: pentatricopeptide repeat-containing protein At2g18940
           [Vitis vinifera]
 gi|297735424|emb|CBI17864.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 237/519 (45%), Gaps = 72/519 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           VR+ T ++++    GK + A  +F  + + G  P+LVTY  +L     + + +N I  ++
Sbjct: 209 VRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLL 268

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  NG++ D    + VI+A    G ++EA   F ++K  G    T TYN+L++ +G A
Sbjct: 269 DEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKA 328

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E++ +L  M +  N  P+L TYN LV A+       E  + +  M   G+ P+ +T
Sbjct: 329 GIYSEALSILKEMEKN-NCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAIT 387

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL------- 303
           Y T+  AY + G+ D+A     +M+ +G  PN  T   I+    K+ +++E +       
Sbjct: 388 YTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMR 447

Query: 304 ----------------------------RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
                                       R  R MK  G  PN   FN LI  +     + 
Sbjct: 448 SNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQI 507

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
            V ++   M +    P V TY+ ++NA +  G  +  + +  DM   G KP+  +YS++ 
Sbjct: 508 DVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLML 567

Query: 396 KGYVR---EQEPEKAEE------------LLMTMI--------------------ESGFH 420
             Y +    +  EK EE            LL T++                    + G+ 
Sbjct: 568 NCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYK 627

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P++V+F +++S +  +   DRA E+   + E G+ P+L T+ +LM  Y+   + W+ EEI
Sbjct: 628 PDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEI 687

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           L+ ++  G  P   ++  + +     GL +EA R LS++
Sbjct: 688 LKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEM 726



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 216/446 (48%), Gaps = 37/446 (8%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K +C   + +  +L+ + +  G  +E     + +I  G  P+ +TYTT++ A     +
Sbjct: 341 MEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGK 400

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +   S   Q++E+G  P+   +NA++    +   +EE +D    M+ +G  P + T+NT
Sbjct: 401 EDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNT 460

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           ++   G  G  +   ++   M   G  +PN  T+N L+ A+    +  +   +  +M  +
Sbjct: 461 MLAMCGNKGMHKYVNRVFREMKSCG-FEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKA 519

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG----- 297
           G  P V TYN +  A A+ G+ + AE VI++M+  G +PN  +  ++++ Y K G     
Sbjct: 520 GFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGI 579

Query: 298 -KIKEALR--------------------------FARTMKEY---GVHPNLVIFNLLIKG 327
            KI+E +                             R  +E+   G  P+LV+FN ++  
Sbjct: 580 EKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSI 639

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           F +    D   E+L L++E  + PD++TY+++M+ ++  G   K +EI   + K+G KPD
Sbjct: 640 FAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPD 699

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
             +Y+ + KG+ R+   ++A   L  M  SG  P +V + T ++G+   G      EV  
Sbjct: 700 LVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVIS 759

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQ 473
            M +H   PN  T++ ++ GY + ++
Sbjct: 760 YMIQHDCRPNELTYKIVVDGYCKGKK 785



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 172/351 (49%), Gaps = 16/351 (4%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN----V 235
           + T++  Y   GK E ++ + + M + G + P L TYNV++  +     +  +WN    +
Sbjct: 212 WTTILHAYSRIGKYERAITMFEKMRKTG-LSPTLVTYNVMLDVY---GKMGRSWNKILGL 267

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
           + +M ++G++ D  T +T+ +A  + G  D+A +    ++  G      T   ++  + K
Sbjct: 268 LDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGK 327

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI-MDRDGVDEVLALMKEFRVNPDVI 354
            G   EAL   + M++    P+LV +N L+  +V      +G D +  ++++  + P+ I
Sbjct: 328 AGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRK-GIMPNAI 386

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           TY+T++NA+  AG  DK    F  M ++G  P+   Y+ +     ++   E+  ++L  M
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAI-EVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
             +G  PN V + T+++  C +  M + +  VF +M   G  PN  TF  L+  Y     
Sbjct: 447 RSNGCAPNSVTWNTMLA-MCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGS 505

Query: 474 PWRAEEILQIMKAFGVHPQKSTF--LLLAEARRATGLTKEAKRILSKIKNK 522
                ++ + M   G  P  +T+  LL A ARR  G  + A+ ++  +K+K
Sbjct: 506 QIDVVKMYEEMIKAGFTPCVTTYNALLNALARR--GDWEAAESVILDMKSK 554



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 158/368 (42%), Gaps = 51/368 (13%)

Query: 185 KGYGIAGKPEESVKL-----LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           KG  ++G  + +V L     L+L SR  N K + +   ++VR    E   + A  ++ ++
Sbjct: 143 KGLDLSGNWKRAVLLFKWAILNLYSR--NEKIDNQLVELMVRILGRESQHSVALRLLDEI 200

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN--------------GR- 284
           +      DV  + TI  AY++ G+ ++A  +  +M   G+ P               GR 
Sbjct: 201 SVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRS 260

Query: 285 ---------------------TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
                                TC  +IS   +EG + EA +F   +K  G       +N 
Sbjct: 261 WNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNS 320

Query: 324 LIKGFVEIMDRDGV-DEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           L+    ++  + G+  E L+++KE   N   PD++TY+ ++ A+  AGF ++  +  D M
Sbjct: 321 LL----QVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTM 376

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            + GI P+A  Y+ +   Y +  + +KA      M ESG  PNV  +  I+        +
Sbjct: 377 IRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRL 436

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           +  I++   M  +G +PN  T+ T++              + + MK+ G  P + TF  L
Sbjct: 437 EEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNAL 496

Query: 500 AEARRATG 507
             A    G
Sbjct: 497 IGAYGRCG 504



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 1/139 (0%)

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           K D     ++ +   RE +   A  LL  +    +  +V  +TTI+  +   G  +RAI 
Sbjct: 171 KIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAIT 230

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPW-RAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           +F+KM + G+SP L T+  ++  Y +  + W +   +L  M++ G+   + T   +  A 
Sbjct: 231 MFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISAC 290

Query: 504 RATGLTKEAKRILSKIKNK 522
              GL  EA++  +++K++
Sbjct: 291 GREGLLDEARKFFARLKSE 309


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/452 (22%), Positives = 226/452 (50%), Gaps = 2/452 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V   +KL  ++I         ++F  +   G   S      +  +  ++ R +   S++
Sbjct: 61  SVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSVL 120

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLIKGYGI 189
               + G+  + + FN ++        + +A+  F K+ +E    P    Y T++ G   
Sbjct: 121 PIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSK 180

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G  E+++ LL +M  +GN KP++RTY++++ A C + N+  A N++++M    + P++ 
Sbjct: 181 RGHTEKTLSLLRIME-QGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIF 239

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN++     + G+ ++ + ++ EM +  + PN  T  I+I G CKEGK+++A    R M
Sbjct: 240 TYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHM 299

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            E GV P+++ ++ ++ G+      D    V  ++++  + P++ +YS ++N +     +
Sbjct: 300 IEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNL 359

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            K  ++F ++ + G+KPD   YS +  G +       A+++   M+  G  P++ + +T+
Sbjct: 360 AKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTL 419

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+   G ++ A+ +F K+  +    N+  +  ++ G  +  +   A  I + + + G+
Sbjct: 420 LFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGL 479

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            P   T+ ++       GL  E K IL K+++
Sbjct: 480 IPDVRTYNVMITGFCREGLFDEVKGILRKMED 511



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/415 (24%), Positives = 203/415 (48%), Gaps = 5/415 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           V +   L+  L    K  +A  +F  L+ E   +P+ V Y T++  L+ +       S++
Sbjct: 132 VVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLL 191

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +E+    PD   ++ VI+A  +  N++ A++   +MK+  + P   TYN+LI G    
Sbjct: 192 RIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKL 251

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ E+   LL  M    N+ PN+ T+++L+   C E  + +A  VM  M   G++PD++T
Sbjct: 252 GQWEKVKTLLSEMVNL-NINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIIT 310

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y+ I   Y   G+ D+A  V   +   G++PN  +  I+I+GYCK+  + +A++    + 
Sbjct: 311 YSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEIS 370

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G+ P+ V ++ ++ G +E+       ++   M      PD+  +ST++  +   G ++
Sbjct: 371 QKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVE 430

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +F  + +     +   Y+++  G  +     +A  +   +   G  P+V  +  +I
Sbjct: 431 EAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMI 490

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +G+C +G  D    +  KM ++G   N  T+  +M G+  +    +  EI+  MK
Sbjct: 491 TGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSN---KISEIVSFMK 542



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 189/380 (49%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            +A ++F+ ++     PS++ ++ L   +   K ++++ S+  ++   G+       N V
Sbjct: 44  DDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIV 103

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
            N++     ++ A        ++G+     T+NTL+ G     K  ++V L   + RE  
Sbjct: 104 TNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKI 163

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            +PN   Y  ++       +  +  +++  M     KPDV TY+ +  A  ++   D A 
Sbjct: 164 CEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAI 223

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            ++ EM+   + PN  T   +I G CK G+ ++       M    ++PN+  F++LI G 
Sbjct: 224 NLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGL 283

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +    +  DEV+  M E  V PD+ITYS IM+ +   G +D+ + +F+ +   GIKP+ 
Sbjct: 284 CKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNI 343

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
            +YSIL  GY +++   KA +L   + + G  P+ V ++TI+ G    G +  A ++FD+
Sbjct: 344 FSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDE 403

Query: 449 MCEHGVSPNLKTFETLMWGY 468
           M   G +P++    TL++GY
Sbjct: 404 MLRVGPTPDICLHSTLLFGY 423



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 203/418 (48%), Gaps = 2/418 (0%)

Query: 80  NSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ-VEENGM 138
           NS   R +   A ++    ++ G   ++VT+ TLL  L  + +      +  + V E   
Sbjct: 105 NSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKIC 164

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           +P+ + +  V+N  S+ G+ E+ +     M++    P   TY+ +I         + ++ 
Sbjct: 165 EPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAIN 224

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           LL+ M ++ N+ PN+ TYN L+   C      +   ++ +M    + P+V T++ +    
Sbjct: 225 LLNEM-KQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGL 283

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
            + G+ + A+EV+  M   GV+P+  T   I+ GYC  G++  A R    +++ G+ PN+
Sbjct: 284 CKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNI 343

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
             +++LI G+ +  +     ++   + +  + PD +TYSTI++     G +   K+IFD+
Sbjct: 344 FSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDE 403

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M + G  PD   +S L  GY +    E+A  L   +  +    N+  +T +I+G C +  
Sbjct: 404 MLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDR 463

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           +  A  +F+K+   G+ P+++T+  ++ G+         + IL+ M+  G      T+
Sbjct: 464 VREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITY 521



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/362 (22%), Positives = 173/362 (47%), Gaps = 44/362 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           VR+ + ++++L +      A  + N + +    P++ TY +L+  L    ++  + +++S
Sbjct: 203 VRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLS 262

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++    ++P+   F+ +I+   + G +E+A +    M E G+ P   TY+ ++ GY + G
Sbjct: 263 EMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRG 322

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + + ++ +++ R+  +KPN+ +Y++L+  +C +KN+ +A  +  +++  G+KPD VTY
Sbjct: 323 QVDRARRVFNVL-RDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTY 381

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQP------------------------------ 281
           +TI     + G    A+++  EM   G  P                              
Sbjct: 382 STILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLER 441

Query: 282 -----NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
                N     ++I+G CK  +++EA      +   G+ P++  +N++I GF     R+G
Sbjct: 442 NREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFC----REG 497

Query: 337 V-DEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           + DEV  ++++   N    + ITY+ IM  +  +  + +      +M   G   DA    
Sbjct: 498 LFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTG 557

Query: 393 IL 394
           +L
Sbjct: 558 VL 559



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 80/362 (22%), Positives = 159/362 (43%), Gaps = 37/362 (10%)

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +++V L   M R   + P++  ++ L +   N K+ +   ++  +M   G+       N 
Sbjct: 44  DDAVSLFHRMVRMKPL-PSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNI 102

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL-RFARTMKEY 312
           +  +Y      D A  V+      G+  N  T   ++ G   E K+ +A+  F + ++E 
Sbjct: 103 VTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREK 162

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD-- 370
              PN V++  ++ G  +    +    +L +M++    PDV TYS +++A      +D  
Sbjct: 163 ICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAA 222

Query: 371 ---------------------------------KCKEIFDDMGKAGIKPDAHAYSILAKG 397
                                            K K +  +M    I P+ H +SIL  G
Sbjct: 223 INLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDG 282

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             +E + E A+E++  MIE G  P+++ ++ I+ G+C  G +DRA  VF+ + + G+ PN
Sbjct: 283 LCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPN 342

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + ++  L+ GY + +   +A ++   +   G+ P   T+  +       G   +AK+I  
Sbjct: 343 IFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFD 402

Query: 518 KI 519
           ++
Sbjct: 403 EM 404



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 56/254 (22%), Positives = 114/254 (44%), Gaps = 34/254 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + + +M+    RG+   A+ +FN L + G KP++ +Y+ L+     +K       +  
Sbjct: 308 IITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFG 367

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G+ PD++ ++ +++   E G + +A   F +M   G TP    ++TL+ GY   G
Sbjct: 368 EISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYG 427

Query: 192 KPEESVKLLDLMSR---EGNVK-------------------------------PNLRTYN 217
             EE++ L   + R   + N+                                P++RTYN
Sbjct: 428 LVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYN 487

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           V++  +C E    E   ++ KM  +G   + +TYN I   + ++ +  +    + EM   
Sbjct: 488 VMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGR 547

Query: 278 GVQPNGRTCGIIIS 291
           G   +  T G++I+
Sbjct: 548 GFSFDATTTGVLIN 561



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/173 (21%), Positives = 73/173 (42%), Gaps = 1/173 (0%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P VI +S +               +F +M   GI       +I+   Y      + A  +
Sbjct: 60  PSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTNSYCLRHRIDCAFSV 119

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS-PNLKTFETLMWGYS 469
           L   +++G   NVV F T++ G  ++  +  A+ +F K+    +  PN   + T+M G S
Sbjct: 120 LPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMYGTVMNGLS 179

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +     +   +L+IM+     P   T+ ++ +A         A  +L+++K K
Sbjct: 180 KRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQK 232


>gi|15226907|ref|NP_181058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100538|sp|O82178.1|PP186_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g35130
 gi|3668091|gb|AAC61823.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253974|gb|AEC09068.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 591

 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 206/430 (47%), Gaps = 6/430 (1%)

Query: 60  CSFCMNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT 118
           C + + K S +  V     L+++  ++ + +EA++++  L+E  + P+  TY  L+ A  
Sbjct: 142 CEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC 201

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSI---FFNAVINAF-SESGNMEEAMDTFWKMKESGLT 174
           +         ++ +++ + + P +I    +NA I       GN EEA+D F +MK     
Sbjct: 202 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 261

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           PTT TYN +I  YG A K   S KL   M R    KPN+ TY  LV A+  E    +A  
Sbjct: 262 PTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFAREGLCEKAEE 320

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           +  ++   G++PDV  YN +  +Y++ G    A E+   M+H G +P+  +  I++  Y 
Sbjct: 321 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 380

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           + G   +A      MK  G+ P +    LL+  + +  D    + ++  M E  V PD  
Sbjct: 381 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 440

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
             ++++N +   G   K ++I  +M       D   Y+IL   Y +    E+ EEL + +
Sbjct: 441 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 500

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
            E  F P+VV +T+ I  +       + +EVF++M + G +P+  T + L+   S   Q 
Sbjct: 501 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV 560

Query: 475 WRAEEILQIM 484
            +   +L+ M
Sbjct: 561 EQVTSVLRTM 570



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 151/300 (50%), Gaps = 10/300 (3%)

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R+ + +P++  +N+L+ A+  +    EA ++  ++  S   P   TY  +  AY   G  
Sbjct: 147 RKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLI 206

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK------EALRFARTMKEYGVHPNL 318
           ++AE V+VEM+++ V P  +T G+ +     EG +K      EA+   + MK     P  
Sbjct: 207 ERAEVVLVEMQNHHVSP--KTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 264

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
             +NL+I  + +        ++   M+  +  P++ TY+ ++NA++  G  +K +EIF+ 
Sbjct: 265 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 324

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           + + G++PD + Y+ L + Y R   P  A E+   M   G  P+   +  ++  +   G 
Sbjct: 325 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 384

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
              A  VF++M   G++P +K+   L+  YS+AR   + E I++ M   GV P   TF+L
Sbjct: 385 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP--DTFVL 442


>gi|242050480|ref|XP_002462984.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
 gi|241926361|gb|EER99505.1| hypothetical protein SORBIDRAFT_02g035800 [Sorghum bicolor]
          Length = 668

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 199/399 (49%), Gaps = 3/399 (0%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS---IHSIMSQVEENGMDPDSIFFNAVIN 150
           + + L E    P L +Y+ LLA+L   +       +  ++  + E+ ++PD+  F+ +I+
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLIS 236

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           AF+ +   + A++     +  GLTP ++    LI   G AG+  E+  L       G +K
Sbjct: 237 AFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIK 296

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P  R YN L++ +    ++  A  V+ +M+  G+ PD  TY+ +  AY + G  + A  +
Sbjct: 297 PRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 356

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + EME +GV+P+      I++G+   G  ++A    R M+  GV P+   +N++I  F +
Sbjct: 357 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGK 416

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
                   +    M+E  + PDV+T++T+++A    G  D+  E+F++M ++   P    
Sbjct: 417 YNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTT 476

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+I+      ++  E  E +L  M E G  PN++ +TT++  +   G    AI+  + M 
Sbjct: 477 YNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMK 536

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             G+ P+   +  L+  Y++      A  +++ MKA G+
Sbjct: 537 ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGL 575



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/370 (25%), Positives = 173/370 (46%), Gaps = 40/370 (10%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F +  E     R+   L+   +  G  + A+ + + + + G  P   TY+ L+ A T   
Sbjct: 289 FFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAG 348

Query: 122 RFNSIHSIMSQVEENGMD-----------------------------------PDSIFFN 146
           R+ S   ++ ++E +G+                                    PD  F+N
Sbjct: 349 RWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYN 408

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I+ F +   +  AMD F +M+E  + P   T+NTLI  +   G+ + +++L + M RE
Sbjct: 409 VMIDTFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEM-RE 467

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            N  P   TYN+++     ++       ++ +M   G+ P+++TY T+   Y ++G   +
Sbjct: 468 SNCPPGTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKE 527

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A + I  M+ +G++P+      +++ Y + G    AL   + MK  G+  ++++ N LI 
Sbjct: 528 AIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLIN 587

Query: 327 GFVEIMDRDGVD--EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
            F E  DR  V+   VL  MKE  + PDVITY+T+M A       DK   I+++M  +G 
Sbjct: 588 AFGE--DRRVVEAFSVLQFMKENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGC 645

Query: 385 KPDAHAYSIL 394
            PD  A ++L
Sbjct: 646 APDRKARAML 655



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 112/470 (23%), Positives = 209/470 (44%), Gaps = 40/470 (8%)

Query: 74  SMTKLMNSLIERGKPQEA---QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           S + L+ SL+    P +A   + +  +L E   +P    ++ L++A       ++   ++
Sbjct: 192 SYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFARAALPDAALELL 251

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGI 189
           +  +  G+ P S    A+I+A   +G + EA   F +   +G + P T  YN L+KGY  
Sbjct: 252 ASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVR 311

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G  + + ++LD MS+ G V P+  TY++LV A+        A  ++ +M A G+KP   
Sbjct: 312 IGSLKNAEQVLDEMSQCG-VAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSY 370

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR------------------------- 284
            ++ I   +   G+  +A  V+ EM+ +GV+P+                           
Sbjct: 371 VFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCLGHAMDAFDRM 430

Query: 285 ----------TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
                     T   +I  +CK G+   A+     M+E    P    +N++I    E    
Sbjct: 431 REEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPGTTTYNIMINLLGEQERW 490

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           +GV+ +L+ MKE  + P++ITY+T+++ +  +G   +  +  + M   G+KP    Y  L
Sbjct: 491 EGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMKADGLKPSPTMYHAL 550

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
              Y +    + A  ++  M   G   ++++  ++I+ +  D  +  A  V   M E+G+
Sbjct: 551 VNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMKENGL 610

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
            P++ T+ TLM       Q  +   I + M   G  P +    +L  A R
Sbjct: 611 RPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSALR 660



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/399 (22%), Positives = 179/399 (44%), Gaps = 11/399 (2%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM---DTFWKMKESGLTPTTSTYNTLIK 185
           ++S + E+   PD   ++ ++ +   + +  +A         ++ES L P    ++ LI 
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLIS 236

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-M 244
            +  A  P+ +++LL      G + P       L+ A  +   + EA  +  +   +G +
Sbjct: 237 AFARAALPDAALELLASAQAIG-LTPRSNAVTALISALGSAGRVAEAEALFLEFFLAGEI 295

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           KP    YN +   Y + G    AE+V+ EM   GV P+  T  +++  Y + G+ + A  
Sbjct: 296 KPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARI 355

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMN 361
             + M+  GV P+  +F+ ++ GF    DR    +  A+++E +   V PD   Y+ +++
Sbjct: 356 LLKEMEADGVKPSSYVFSRILAGF---RDRGDWQKAFAVLREMQASGVRPDRHFYNVMID 412

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +     +    + FD M +  I+PD   ++ L   + +    ++A EL   M ES   P
Sbjct: 413 TFGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPP 472

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
               +  +I+        +    +  +M E G+ PN+ T+ TL+  Y  + +   A + +
Sbjct: 473 GTTTYNIMINLLGEQERWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCI 532

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           + MKA G+ P  + +  L  A    GL   A  ++  +K
Sbjct: 533 EAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMK 571



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/304 (24%), Positives = 151/304 (49%), Gaps = 5/304 (1%)

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW---NVMHKMAASGMKPDVVTYNT 253
           ++LL L+ RE +  P+L +Y+ L+ +  N ++  +A     ++  +  S ++PD   ++ 
Sbjct: 175 LRLLSLL-REHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRFARTMKEY 312
           + +A+A+    D A E++   +  G+ P       +IS     G++ EA   F       
Sbjct: 234 LISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGSAGRVAEAEALFLEFFLAG 293

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
            + P    +N L+KG+V I      ++VL  M +  V PD  TYS +++A++ AG  +  
Sbjct: 294 EIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 353

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           + +  +M   G+KP ++ +S +  G+    + +KA  +L  M  SG  P+   +  +I  
Sbjct: 354 RILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDT 413

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +     +  A++ FD+M E  + P++ T+ TL+  + +  +  RA E+ + M+     P 
Sbjct: 414 FGKYNCLGHAMDAFDRMREEEIEPDVVTWNTLIDAHCKGGRHDRAMELFEEMRESNCPPG 473

Query: 493 KSTF 496
            +T+
Sbjct: 474 TTTY 477


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 209/431 (48%), Gaps = 1/431 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A A F  +I    +PS V     L ++  +K+++++ S+ +Q++  G+  +    N +I
Sbjct: 69  DAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILI 128

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N+     ++  A+    KM + G+ P + T+ TLI G    G+ +E+V+L + M+   + 
Sbjct: 129 NSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGR-DA 187

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            PN  T+ +LV   C +  ++EA  V   M   G++P++ TYN +   Y    E + A +
Sbjct: 188 MPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASK 247

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           V   M   G  P+  +  I+I+GYCK  +I EA      M E  + PN V +N L++G  
Sbjct: 248 VFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLC 307

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
                    E+   M    + P++ TYS +++     G +++  ++   M +  ++PD  
Sbjct: 308 HASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIV 367

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+IL +G     + E A+EL   +  +G  P+V  +  +I G   +G  D A ++F KM
Sbjct: 368 LYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKM 427

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
            + G  P+  ++  ++ G+ + + P  A +++  M         STF +L +      + 
Sbjct: 428 EDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDLESHDEII 487

Query: 510 KEAKRILSKIK 520
               R  S+I+
Sbjct: 488 SRFMRESSQIR 498



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 193/392 (49%), Gaps = 36/392 (9%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+NSL        A ++ + + + G +P  VT+TTL+  L  + R      + +++
Sbjct: 123 TLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEM 182

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
                 P+++ F  +++   + G + EA   F  M E G+ P   TYN L+ GY +  + 
Sbjct: 183 AGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEM 242

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ K+ ++M  +G   P++ +Y++L+  +C  + I EA  ++ +M+   + P+ VTYNT
Sbjct: 243 NDASKVFEIMVGKG-CAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNT 301

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +           +A+E+  +M  +G+ PN RT  I++ G CK G ++EAL+   +M+E  
Sbjct: 302 LMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERK 361

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P++V++N+LI+G                                      AG ++  K
Sbjct: 362 LEPDIVLYNILIQGMF-----------------------------------IAGKLEVAK 386

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+F  +   GI+P    Y+I+ KG ++E   ++A +L   M + GF P+   +  II G+
Sbjct: 387 ELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGF 446

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
             +     AI++ D+M     S +  TF+ L+
Sbjct: 447 LQNQDPSTAIQLIDEMVGRRFSADSSTFKMLL 478



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 180/367 (49%), Gaps = 7/367 (1%)

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYG-IAGKPEES--VKLLDLMSREGNVKPNLR 214
           +++AM +F++M      P+   +  L K  G IA K + S  V L + M   G V  N  
Sbjct: 67  IDDAMASFYRMIHMNPRPS---FVELGKFLGSIAKKKQYSTVVSLCNQMDLFG-VAHNDY 122

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           T N+L+ + C   +I  A +V+ KM   G++PD VT+ T+       G   +A E+  EM
Sbjct: 123 TLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEM 182

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
                 PN  T  I++   CK+G + EA     TM E GV PN+  +N L+ G+   ++ 
Sbjct: 183 AGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEM 242

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           +   +V  +M      P V +YS ++N +  +  +D+ K +   M +  + P+   Y+ L
Sbjct: 243 NDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTL 302

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            +G        +A+EL   M  SG  PN+  ++ ++ G C  G ++ A+++   M E  +
Sbjct: 303 MQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKL 362

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            P++  +  L+ G   A +   A+E+   + A G+ P   T+ ++ +     GL+ EA +
Sbjct: 363 EPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYK 422

Query: 515 ILSKIKN 521
           +  K+++
Sbjct: 423 LFRKMED 429



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 83/291 (28%), Positives = 151/291 (51%), Gaps = 1/291 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++ L ++G   EA+ +F  + E G +P++ TY  L+    ++   N    +   +
Sbjct: 193 TFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIM 252

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P    ++ +IN + +S  ++EA     +M E  L P T TYNTL++G   A   
Sbjct: 253 VGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSL 312

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+ +L   M   G + PNLRTY++L+   C   ++ EA  ++  M    ++PD+V YN 
Sbjct: 313 LEAQELFKKMCSSGML-PNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNI 371

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +       G+ + A+E+  ++  NG++P+ RT  I+I G  KEG   EA +  R M++ G
Sbjct: 372 LIQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDG 431

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
             P+   +N++I+GF++  D     +++  M   R + D  T+  +++  S
Sbjct: 432 FLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDLES 482



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/302 (23%), Positives = 141/302 (46%), Gaps = 6/302 (1%)

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
           N+  I +A    ++M     +P  V       + A+  +      +  +M+  GV  N  
Sbjct: 63  NDIGIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDY 122

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T  I+I+  C+   I  A+     M + G+ P+ V F  LI G   + +   + E + L 
Sbjct: 123 TLNILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLING---LCNEGRIKEAVELF 179

Query: 345 KEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
            E       P+ +T++ +++     G + + + +F+ M + G++P+ + Y+ L  GY   
Sbjct: 180 NEMAGRDAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLR 239

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            E   A ++   M+  G  P+V  ++ +I+G+C    +D A  +  +M E  + PN  T+
Sbjct: 240 LEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTY 299

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            TLM G   A     A+E+ + M + G+ P   T+ +L +     G  +EA ++L+ ++ 
Sbjct: 300 NTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQE 359

Query: 522 KE 523
           ++
Sbjct: 360 RK 361



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 139/276 (50%), Gaps = 9/276 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   LMN    R +  +A  +F  ++  G  PS+ +Y+ L+      +R +   ++++
Sbjct: 226 IYTYNALMNGYCLRLEMNDASKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLT 285

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ E  + P+++ +N ++     + ++ EA + F KM  SG+ P   TY+ L+ G    G
Sbjct: 286 QMSEKELIPNTVTYNTLMQGLCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHG 345

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             EE++KLL  M +E  ++P++  YN+L++       +  A  +  K+ A+G++P V TY
Sbjct: 346 HLEEALKLLTSM-QERKLEPDIVLYNILIQGMFIAGKLEVAKELFSKLFANGIRPSVRTY 404

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     + G +D+A ++  +ME +G  P+  +  +II G+ +      A++    M  
Sbjct: 405 NIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVG 464

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA-LMKE 346
                +   F +L       +D +  DE+++  M+E
Sbjct: 465 RRFSADSSTFKML-------LDLESHDEIISRFMRE 493



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 60/204 (29%), Positives = 104/204 (50%), Gaps = 1/204 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S + L+N   +  +  EA+A+   + E    P+ VTY TL+  L           + 
Sbjct: 260 SVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSLLEAQELF 319

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  +GM P+   ++ +++   + G++EEA+     M+E  L P    YN LI+G  IA
Sbjct: 320 KKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNILIQGMFIA 379

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           GK E + +L   +   G ++P++RTYN++++    E    EA+ +  KM   G  PD  +
Sbjct: 380 GKLEVAKELFSKLFANG-IRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGFLPDSCS 438

Query: 251 YNTIATAYAQNGEADQAEEVIVEM 274
           YN I   + QN +   A ++I EM
Sbjct: 439 YNVIIQGFLQNQDPSTAIQLIDEM 462


>gi|356561685|ref|XP_003549110.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12775,
           mitochondrial-like [Glycine max]
          Length = 477

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 197/403 (48%), Gaps = 9/403 (2%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A A FN ++     P    +  +L++L   K + ++ S+  Q + NG+ P+    N +IN
Sbjct: 77  AVASFNRMLLMRPPPPTFHFDNILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILIN 136

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            F    ++  A   F  + + G  P   T NTLIKG    G+ + ++   D +  +G  +
Sbjct: 137 CFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQG-FQ 195

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
            +  +Y  L+   C          ++ K+    +KPDVV Y TI     +N     A ++
Sbjct: 196 LDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDL 255

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             EM   G+ PN  T   +I G+C  G +KEA      MK   ++P++  FN+LI    +
Sbjct: 256 YSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDVYTFNILI----D 311

Query: 331 IMDRDG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
            + ++G +DE ++L +E +   + P+++TY+++++       +++   +   M + GI+P
Sbjct: 312 ALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQP 371

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D ++Y+IL     +    E A++    ++  G+H NV  +  +I+G C  G     +++ 
Sbjct: 372 DVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLK 431

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            KM   G  P+  TF+T++    E  +  +AE+ L+ M A G+
Sbjct: 432 SKMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 154/314 (49%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V PNL T N+L+  +C+  +IT A++V   +   G  PD +T NT+       GE  +A 
Sbjct: 124 VTPNLCTLNILINCFCHLAHITFAFSVFANILKRGYHPDAITLNTLIKGLCFCGEIKRAL 183

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
               ++   G Q +  + G +I+G CK G+ K   R  R ++ + V P++V++  +I   
Sbjct: 184 YFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKLEGHSVKPDVVMYTTIIHCL 243

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            +        ++ + M    ++P+V TY+T++  +   G + +   + ++M    I PD 
Sbjct: 244 CKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNLKEAFSLLNEMKLKNINPDV 303

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
           + ++IL     +E + ++A  L   M      PN+V +T++I G C +  ++RAI +  K
Sbjct: 304 YTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTSLIDGLCKNHHLERAIALCKK 363

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           M E G+ P++ ++  L+    +  +   A++  Q +   G H    T+ ++       GL
Sbjct: 364 MKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGL 423

Query: 509 TKEAKRILSKIKNK 522
             +   + SK++ K
Sbjct: 424 FGDVMDLKSKMEGK 437



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/311 (25%), Positives = 160/311 (51%), Gaps = 1/311 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+  L   G+ + A    + ++  G +   V+Y TL+  L       ++  ++ ++
Sbjct: 165 TLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVARLLRKL 224

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E + + PD + +  +I+   ++  + +A D + +M   G++P   TYNTLI G+ I G  
Sbjct: 225 EGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGFCIMGNL 284

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+  LL+ M  + N+ P++ T+N+L+ A   E  I EA ++  +M    M P++VTY +
Sbjct: 285 KEAFSLLNEMKLK-NINPDVYTFNILIDALGKEGKIDEAISLFEEMKHKNMFPNIVTYTS 343

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     +N   ++A  +  +M+  G+QP+  +  I++   CK G+++ A +F + +   G
Sbjct: 344 LIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQHLLVKG 403

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
            H N+  +N++I G  +      V ++ + M+     PD IT+ TI+ A       DK +
Sbjct: 404 YHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAE 463

Query: 374 EIFDDMGKAGI 384
           +   +M   G+
Sbjct: 464 KFLREMIARGL 474



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 105/234 (44%)

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           I+S   K       +   +  +  GV PNL   N+LI  F  +        V A + +  
Sbjct: 99  ILSSLVKNKHYLTVISLFKQFQSNGVTPNLCTLNILINCFCHLAHITFAFSVFANILKRG 158

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
            +PD IT +T++      G + +     D +   G + D  +Y  L  G  +  E +   
Sbjct: 159 YHPDAITLNTLIKGLCFCGEIKRALYFHDKVVAQGFQLDQVSYGTLINGLCKAGETKAVA 218

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            LL  +      P+VV++TTII   C +  +  A +++ +M   G+SPN+ T+ TL++G+
Sbjct: 219 RLLRKLEGHSVKPDVVMYTTIIHCLCKNKRVGDACDLYSEMIVKGISPNVFTYNTLIYGF 278

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
                   A  +L  MK   ++P   TF +L +A    G   EA  +  ++K+K
Sbjct: 279 CIMGNLKEAFSLLNEMKLKNINPDVYTFNILIDALGKEGKIDEAISLFEEMKHK 332



 Score = 48.5 bits (114), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 28/102 (27%), Positives = 51/102 (50%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T L+++L + G+ + A+  F +L+  G+  ++ TY  ++  L     F  +  + S
Sbjct: 373 VYSYTILLDALCKGGRLENAKQFFQHLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKS 432

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL 173
           ++E  G  PD+I F  +I A  E    ++A     +M   GL
Sbjct: 433 KMEGKGCMPDAITFKTIICALFEKDENDKAEKFLREMIARGL 474



 Score = 47.8 bits (112), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 51/113 (45%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T L++ L +    + A A+   + E G +P + +YT LL AL    R  +      
Sbjct: 338 IVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKQFFQ 397

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
            +   G   +   +N +IN   ++G   + MD   KM+  G  P   T+ T+I
Sbjct: 398 HLLVKGYHLNVRTYNVMINGLCKAGLFGDVMDLKSKMEGKGCMPDAITFKTII 450


>gi|115482764|ref|NP_001064975.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|22165074|gb|AAM93691.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31432889|gb|AAP54465.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639584|dbj|BAF26889.1| Os10g0499500 [Oryza sativa Japonica Group]
 gi|125575293|gb|EAZ16577.1| hypothetical protein OsJ_32049 [Oryza sativa Japonica Group]
 gi|215694503|dbj|BAG89496.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215697419|dbj|BAG91413.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|295901486|dbj|BAJ07249.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
 gi|295901490|dbj|BAJ07251.1| pentatricopeptide repeat-containing protein [Oryza sativa Japonica
           Group]
          Length = 506

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 200/452 (44%), Gaps = 40/452 (8%)

Query: 83  IERGKPQEAQAIFNNLIEGGHK---PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           + R  P  A + FN +   G     P++ TY  L+       R +   + +  V + G  
Sbjct: 63  VARDNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFR 122

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWK-MKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            + I FN ++         ++AMD   + M E    P   ++  ++KG     + +E+++
Sbjct: 123 VEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELSCVPNVFSHTIILKGLCHENRSQEALE 182

Query: 199 LLDLMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           LL +M+ +G    PN+ +Y+ ++       +  +A+    +M    + P+VV Y++I  A
Sbjct: 183 LLHMMADDGGGCLPNVVSYSTVIDGLLKGGDPDKAYATYREMLDRRILPNVVIYSSIIAA 242

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+A EV   M  NGV PN  T   ++ G+C  G++ EA++F   M   GV PN
Sbjct: 243 LCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPN 302

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
                                              V+TYS+ M+     G   + ++IFD
Sbjct: 303 -----------------------------------VVTYSSFMDYLCKNGRCTEARKIFD 327

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M K G+KPD   YS L  GY  E    +   L   M++S   P+  +F T+I      G
Sbjct: 328 SMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQG 387

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D A+ VF KM + G+ PN  T+ TL+ GY +  +   A  + Q M + GV P   T+ 
Sbjct: 388 KVDEAMLVFSKMRQQGLKPNCVTYSTLINGYCKITRMENALALFQEMVSNGVSPNFITYN 447

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNEME 529
           ++ +    TG T  AK    +I    + + +E
Sbjct: 448 IMLQGLFRTGRTATAKEFYVQIIKSGKKDLIE 479



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/328 (27%), Positives = 169/328 (51%), Gaps = 10/328 (3%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIE--GGHKPSLVTYTTLLAALTIQ 120
           M + SC   V S T ++  L    + QEA  + + + +  GG  P++V+Y+T++  L   
Sbjct: 152 MTELSCVPNVFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVIDGLLKG 211

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY 180
              +  ++   ++ +  + P+ + ++++I A  +   M++AM+   +M ++G+TP   TY
Sbjct: 212 GDPDKAYATYREMLDRRILPNVVIYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTY 271

Query: 181 NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
            +L+ G+  +G+  E++K L+ M   G V+PN+ TY+  +   C     TEA  +   M 
Sbjct: 272 TSLVHGFCSSGQLTEAIKFLEKMCSNG-VEPNVVTYSSFMDYLCKNGRCTEARKIFDSMV 330

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
             G+KPD+ TY+++   YA  G   +   +   M  + +QP+      +I    K+GK+ 
Sbjct: 331 KRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVD 390

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYS 357
           EA+     M++ G+ PN V ++ LI G+ +I     ++  LAL +E     V+P+ ITY+
Sbjct: 391 EAMLVFSKMRQQGLKPNCVTYSTLINGYCKITR---MENALALFQEMVSNGVSPNFITYN 447

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            ++      G     KE +  + K+G K
Sbjct: 448 IMLQGLFRTGRTATAKEFYVQIIKSGKK 475


>gi|255586139|ref|XP_002533731.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526356|gb|EEF28650.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/512 (24%), Positives = 224/512 (43%), Gaps = 75/512 (14%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   EA+  F+ L   G+KP  VTY  LL        F+   S++S++EEN   PD++ +
Sbjct: 307 GLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTY 366

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N V+ A+  +G  EE       M   G+ P   TY T+I  YG  G  ++++++ D M  
Sbjct: 367 NEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMME 426

Query: 206 EGNVKPNLRTYNVLVRAW--------------------CNEKNITEAWNV---------M 236
            G V PN+ TYN ++                       C+  +IT  WN          M
Sbjct: 427 LGCV-PNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHIT--WNTMLAMCGKKGM 483

Query: 237 HK--------MAASGMKPDVVTYNTIATAY------------------------------ 258
           HK        M   G +PD  T+NT+ +AY                              
Sbjct: 484 HKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNA 543

Query: 259 -----AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
                A+ G+   AE VI++M + G +P+  +  +++  Y K G +K      +++ +  
Sbjct: 544 LLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGD 603

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + P+ ++   L+    +     G++     +++    PD++  +++++ ++     D+  
Sbjct: 604 IFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAH 663

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+   +  AG++PD   ++ L   Y R  +  KAEE+L  +  SG  P++V + T+I G+
Sbjct: 664 EMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGF 723

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C  G M   I +  +M   GV P + T+ T + GY+         +++  M      P +
Sbjct: 724 CRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNE 783

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNKERT 525
            T+ ++A+         EA   +SKIK+ + T
Sbjct: 784 LTYKIVADGYCKARRYDEAIDFVSKIKDVDDT 815



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/423 (27%), Positives = 204/423 (48%), Gaps = 4/423 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           VR+ T ++++    GK   A  IF  + E G  PSLVTY  +L     + + ++ I  ++
Sbjct: 222 VRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELL 281

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+D D    + V++A    G ++EA + F  +K  G  P T TYN L+  +G A
Sbjct: 282 DEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKA 341

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E++ +L  M  E N  P+  TYN +V A+       E   V+  MA+ G+ P+ VT
Sbjct: 342 GIFSEALSVLSEM-EENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVT 400

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y TI  AY + G+ D+A E+  +M   G  PN  T   ++    K+   +E ++    MK
Sbjct: 401 YTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMK 460

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PN + +N ++    +      V++V   MK     PD  T++T+++A+   G  +
Sbjct: 461 LNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNN 520

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              ++ ++M KAG  P  + Y+ L     R  + + AE +++ M   GF P+   ++ ++
Sbjct: 521 DAAKMHEEMIKAGFSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSLMV 580

Query: 431 SGWCSDGSMDRAIEVFDKMCEHG-VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             +   G++ + IE+ +K    G + P+     TL+    + R     E   Q ++  G 
Sbjct: 581 HSYAKGGNV-KGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHGY 639

Query: 490 HPQ 492
            P 
Sbjct: 640 KPD 642



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 98/400 (24%), Positives = 191/400 (47%), Gaps = 1/400 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++N+    G   +A  +F+ ++E G  P++ TY  +L  L  +     +  I+  +
Sbjct: 400 TYTTIINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHM 459

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + NG  P+ I +N ++    + G  +     F +MK  G  P   T+NTLI  YG  G  
Sbjct: 460 KLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSN 519

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++ K+ + M + G   P + TYN L+ A     +   A +V+  M   G +P   +Y+ 
Sbjct: 520 NDAAKMHEEMIKAG-FSPCINTYNALLNALARRGDWKAAESVILDMRNKGFRPSETSYSL 578

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  +YA+ G     E +   +    + P+      ++    K   +    R  + ++++G
Sbjct: 579 MVHSYAKGGNVKGIEMIEKSIYDGDIFPSWMLLRTLVLANFKCRSLTGMERAFQALQKHG 638

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P+LV+ N ++  F +    D   E+L L+ +  + PD++T++++M+ ++  G   K +
Sbjct: 639 YKPDLVLCNSMLSIFAKNNMYDRAHEMLRLIHDAGLQPDLVTHNSLMDMYARGGDCWKAE 698

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+   +  +G KPD  +Y+ + KG+ R+   ++   +L  M   G  P +  + T ISG+
Sbjct: 699 EVLRMLQTSGGKPDLVSYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGY 758

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
            + G      +V   M  H   PN  T++ +  GY +AR+
Sbjct: 759 AAQGMFTEINDVISYMIVHNCRPNELTYKIVADGYCKARR 798



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 179/381 (46%), Gaps = 4/381 (1%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP-EESVKLLDLM 203
           +  +++A+S +G    A++ F +M ESGL+P+  TYN ++  YG  G+  ++ ++LLD M
Sbjct: 225 YTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEM 284

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
              G +  +  T + ++ A   E  I EA      + + G KP  VTYN +   + + G 
Sbjct: 285 RSRG-LDFDEFTCSTVLSACGREGLIDEAREFFSGLKSEGYKPGTVTYNALLHVFGKAGI 343

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
             +A  V+ EME N   P+  T   +++ Y + G  +E       M   G+ PN V +  
Sbjct: 344 FSEALSVLSEMEENNCPPDAVTYNEVVAAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTT 403

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           +I  +  + D D   E+   M E    P+V TY+ ++         ++  +I   M   G
Sbjct: 404 IINAYGRVGDIDKALEMFDQMMELGCVPNVATYNAVLGMLGKKSLSEEMMKILGHMKLNG 463

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
             P+   ++ +     ++   +   ++   M   GF P+   F T+IS +   GS + A 
Sbjct: 464 CSPNHITWNTMLAMCGKKGMHKYVNQVFREMKNCGFEPDRDTFNTLISAYGRCGSNNDAA 523

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR-AEEILQIMKAFGVHPQKSTFLLLAEA 502
           ++ ++M + G SP + T+  L+   +  R  W+ AE ++  M+  G  P ++++ L+  +
Sbjct: 524 KMHEEMIKAGFSPCINTYNALLNALAR-RGDWKAAESVILDMRNKGFRPSETSYSLMVHS 582

Query: 503 RRATGLTKEAKRILSKIKNKE 523
               G  K  + I   I + +
Sbjct: 583 YAKGGNVKGIEMIEKSIYDGD 603



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 100/395 (25%), Positives = 181/395 (45%), Gaps = 6/395 (1%)

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLI 184
           +HS+ S  + +  +   +   +++ A   SGN E+A+  F W +   G+       + + 
Sbjct: 132 LHSLASFFDSSKYELLQVDLISLLKALDYSGNWEKALLLFEWSVLNLGIANEKIDRHAIE 191

Query: 185 KGYGIAGKPEE---SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
               I G+  +   + KL D++  +  V  ++R Y  ++ A+        A  +  +M  
Sbjct: 192 LMVRILGRESQHTVASKLFDVIPLDDYVL-DVRAYTTILHAYSRTGKYHRAIEIFERMNE 250

Query: 242 SGMKPDVVTYNTIATAYAQNGEA-DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
           SG+ P +VTYN +   Y + G + D+  E++ EM   G+  +  TC  ++S   +EG I 
Sbjct: 251 SGLSPSLVTYNVMLDVYGKMGRSWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLID 310

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           EA  F   +K  G  P  V +N L+  F +         VL+ M+E    PD +TY+ ++
Sbjct: 311 EAREFFSGLKSEGYKPGTVTYNALLHVFGKAGIFSEALSVLSEMEENNCPPDAVTYNEVV 370

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
            A+  AGF ++   + D M   GI P+A  Y+ +   Y R  + +KA E+   M+E G  
Sbjct: 371 AAYVRAGFHEEGAVVIDAMASKGIMPNAVTYTTIINAYGRVGDIDKALEMFDQMMELGCV 430

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PNV  +  ++         +  +++   M  +G SPN  T+ T++    +        ++
Sbjct: 431 PNVATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQV 490

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
            + MK  G  P + TF  L  A    G   +A ++
Sbjct: 491 FREMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKM 525



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 82/380 (21%), Positives = 170/380 (44%), Gaps = 5/380 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++  L ++   +E   I  ++   G  P+ +T+ T+LA    +     ++ +  
Sbjct: 433 VATYNAVLGMLGKKSLSEEMMKILGHMKLNGCSPNHITWNTMLAMCGKKGMHKYVNQVFR 492

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++  G +PD   FN +I+A+   G+  +A     +M ++G +P  +TYN L+      G
Sbjct: 493 EMKNCGFEPDRDTFNTLISAYGRCGSNNDAAKMHEEMIKAGFSPCINTYNALLNALARRG 552

Query: 192 --KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
             K  ESV +LD+  R    +P+  +Y+++V ++    N+     +   +    + P  +
Sbjct: 553 DWKAAESV-ILDM--RNKGFRPSETSYSLMVHSYAKGGNVKGIEMIEKSIYDGDIFPSWM 609

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
              T+  A  +       E     ++ +G +P+   C  ++S + K      A    R +
Sbjct: 610 LLRTLVLANFKCRSLTGMERAFQALQKHGYKPDLVLCNSMLSIFAKNNMYDRAHEMLRLI 669

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            + G+ P+LV  N L+  +    D    +EVL +++     PD+++Y+T++  +   G M
Sbjct: 670 HDAGLQPDLVTHNSLMDMYARGGDCWKAEEVLRMLQTSGGKPDLVSYNTVIKGFCRKGLM 729

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
            +   I  +M   G+ P    Y+    GY  +    +  +++  MI     PN + +  +
Sbjct: 730 QEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYMIVHNCRPNELTYKIV 789

Query: 430 ISGWCSDGSMDRAIEVFDKM 449
             G+C     D AI+   K+
Sbjct: 790 ADGYCKARRYDEAIDFVSKI 809



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/170 (26%), Positives = 86/170 (50%), Gaps = 5/170 (2%)

Query: 358 TIMNAWSTAGFMDKCKEIFD----DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           +++ A   +G  +K   +F+    ++G A  K D HA  ++ +   RE +   A +L   
Sbjct: 153 SLLKALDYSGNWEKALLLFEWSVLNLGIANEKIDRHAIELMVRILGRESQHTVASKLFDV 212

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           +    +  +V  +TTI+  +   G   RAIE+F++M E G+SP+L T+  ++  Y +  +
Sbjct: 213 IPLDDYVLDVRAYTTILHAYSRTGKYHRAIEIFERMNESGLSPSLVTYNVMLDVYGKMGR 272

Query: 474 PW-RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            W +  E+L  M++ G+   + T   +  A    GL  EA+   S +K++
Sbjct: 273 SWDKILELLDEMRSRGLDFDEFTCSTVLSACGREGLIDEAREFFSGLKSE 322



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 21/97 (21%), Positives = 45/97 (46%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++     +G  QE   I + +   G  P + TY T ++    Q  F  I+ ++S +
Sbjct: 715 SYNTVIKGFCRKGLMQEGIRILSEMTSIGVGPCIFTYNTFISGYAAQGMFTEINDVISYM 774

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE 170
             +   P+ + +  V + + ++   +EA+D   K+K+
Sbjct: 775 IVHNCRPNELTYKIVADGYCKARRYDEAIDFVSKIKD 811


>gi|162462150|ref|NP_001105879.1| chloroplast RNA processing1 [Zea mays]
 gi|3289002|gb|AAC25599.1| CRP1 [Zea mays]
          Length = 668

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 199/399 (49%), Gaps = 3/399 (0%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS---IHSIMSQVEENGMDPDSIFFNAVIN 150
           + + L E    P L +Y+ LLA+L   +       +  ++  + E+ ++PD+  F+ +I+
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLIS 236

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           AF+ +   + A++     +  GLTP ++    LI   G AG+  E+  L       G +K
Sbjct: 237 AFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIK 296

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P  R YN L++ +    ++  A  V+ +M+  G+ PD  TY+ +  AY + G  + A  +
Sbjct: 297 PRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 356

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + EME +GV+P+      I++G+   G  ++A    R M+  GV P+   +N++I  F +
Sbjct: 357 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGK 416

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
                   +    M+E  + PDV+T++T+++A    G  D+  E+F++M ++   P    
Sbjct: 417 YNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTT 476

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+I+      ++  E  E +L  M E G  PN++ +TT++  +   G    AI+  + M 
Sbjct: 477 YNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMK 536

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             G+ P+   +  L+  Y++      A  +++ MKA G+
Sbjct: 537 ADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGL 575



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 98/373 (26%), Positives = 175/373 (46%), Gaps = 40/373 (10%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F +  E     R+   L+   +  G  + A+ + + + + G  P   TY+ L+ A T   
Sbjct: 289 FFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAG 348

Query: 122 RFNSIHSIMSQVEENGMD-----------------------------------PDSIFFN 146
           R+ S   ++ ++E +G+                                    PD  F+N
Sbjct: 349 RWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYN 408

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I+ F +   +  AMD F KM+E G+ P   T+NTLI  +   G+ + + +L + M RE
Sbjct: 409 VMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEM-RE 467

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            N  P   TYN+++     +++      ++ +M   G+ P+++TY T+   Y ++G   +
Sbjct: 468 SNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKE 527

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A + I  M+ +G++P+      +++ Y + G    AL   + MK  G+  ++++ N LI 
Sbjct: 528 AIDCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLIN 587

Query: 327 GFVEIMDRDGVD--EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
            F E  DR  V+   VL  M+E  + PDVITY+T+M A       DK   I+++M  +G 
Sbjct: 588 AFGE--DRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGC 645

Query: 385 KPDAHAYSILAKG 397
            PD  A ++L  G
Sbjct: 646 APDRKARAMLRSG 658



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 98/420 (23%), Positives = 194/420 (46%), Gaps = 2/420 (0%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
            + L+++      P  A  +  +    G  P     T L++AL    R     ++  +  
Sbjct: 231 FSDLISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFF 290

Query: 135 ENG-MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             G + P +  +NA++  +   G+++ A     +M + G+ P  +TY+ L+  Y  AG+ 
Sbjct: 291 LAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRW 350

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E +  LL  M  +G VKP+   ++ ++  + +  +  +A+ V+ +M ASG++PD   YN 
Sbjct: 351 ESARILLKEMEADG-VKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNV 409

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + +      A +   +M   G++P+  T   +I  +CK G+   A      M+E  
Sbjct: 410 MIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESN 469

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P    +N++I    E    +GV+ +L+ MKE  + P++ITY+T+++ +  +G   +  
Sbjct: 470 CPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAI 529

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           +  + M   G+KP    Y  L   Y +    + A  ++  M   G   ++++  ++I+ +
Sbjct: 530 DCIEAMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMKADGLEVSILVLNSLINAF 589

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
             D  +  A  V   M E+G+ P++ T+ TLM       Q  +   I + M   G  P +
Sbjct: 590 GEDRRVVEAFSVLQFMRENGLRPDVITYTTLMKALIRVEQFDKVPVIYEEMITSGCAPDR 649



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 95/400 (23%), Positives = 189/400 (47%), Gaps = 12/400 (3%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           ++T L+++L   G+  EA+A+F      G  KP    Y  LL          +   ++ +
Sbjct: 265 AVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTRAYNALLKGYVRIGSLKNAEQVLDE 324

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + + G+ PD   ++ +++A++ +G  E A     +M+  G+ P++  ++ ++ G+   G 
Sbjct: 325 MSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEADGVKPSSYVFSRILAGFRDRGD 384

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +++  +L  M   G V+P+   YNV++  +     +  A +  +KM   G++PDVVT+N
Sbjct: 385 WQKAFAVLREMQASG-VRPDRHFYNVMIDTFGKYNCLGHAMDAFNKMREEGIEPDVVTWN 443

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+  A+ + G  D+A E+  EM  +   P   T  I+I+   ++   +        MKE 
Sbjct: 444 TLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQ 503

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDG-----VDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
           G+ PN++ +  L    V++  R G     +D + A MK   + P    Y  ++NA++  G
Sbjct: 504 GLVPNIITYTTL----VDVYGRSGRYKEAIDCIEA-MKADGLKPSPTMYHALVNAYAQRG 558

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
             D    +   M   G++      + L   +  ++   +A  +L  M E+G  P+V+ +T
Sbjct: 559 LADHALNVVKAMKADGLEVSILVLNSLINAFGEDRRVVEAFSVLQFMRENGLRPDVITYT 618

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           T++         D+   ++++M   G +P+ K    L  G
Sbjct: 619 TLMKALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSG 658



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/356 (23%), Positives = 153/356 (42%), Gaps = 3/356 (0%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS--REGNVKPNLRTYNVLVRAWCN 225
           ++E    P  ++Y+ L+        P ++  L  L+   RE  ++P+   ++ L+ A+  
Sbjct: 181 LREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLISAFAR 240

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG-VQPNGR 284
                 A  ++    A G+ P       + +A    G   +AE + +E    G ++P  R
Sbjct: 241 AALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIKPRTR 300

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
               ++ GY + G +K A +    M + GV P+   ++LL+  +      +    +L  M
Sbjct: 301 AYNALLKGYVRIGSLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARILLKEM 360

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
           +   V P    +S I+  +   G   K   +  +M  +G++PD H Y+++   + +    
Sbjct: 361 EADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGKYNCL 420

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
             A +    M E G  P+VV + T+I   C  G  DRA E+F++M E    P   T+  +
Sbjct: 421 GHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTTYNIM 480

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +    E       E +L  MK  G+ P   T+  L +    +G  KEA   +  +K
Sbjct: 481 INLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMK 536


>gi|334184699|ref|NP_001189682.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|330253975|gb|AEC09069.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 613

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 206/430 (47%), Gaps = 6/430 (1%)

Query: 60  CSFCMNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT 118
           C + + K S +  V     L+++  ++ + +EA++++  L+E  + P+  TY  L+ A  
Sbjct: 164 CEWILRKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYC 223

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSI---FFNAVINAF-SESGNMEEAMDTFWKMKESGLT 174
           +         ++ +++ + + P +I    +NA I       GN EEA+D F +MK     
Sbjct: 224 MAGLIERAEVVLVEMQNHHVSPKTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCK 283

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           PTT TYN +I  YG A K   S KL   M R    KPN+ TY  LV A+  E    +A  
Sbjct: 284 PTTETYNLMINLYGKASKSYMSWKLYCEM-RSHQCKPNICTYTALVNAFAREGLCEKAEE 342

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           +  ++   G++PDV  YN +  +Y++ G    A E+   M+H G +P+  +  I++  Y 
Sbjct: 343 IFEQLQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYG 402

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           + G   +A      MK  G+ P +    LL+  + +  D    + ++  M E  V PD  
Sbjct: 403 RAGLHSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEPDTF 462

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
             ++++N +   G   K ++I  +M       D   Y+IL   Y +    E+ EEL + +
Sbjct: 463 VLNSMLNLYGRLGQFTKMEKILAEMENGPCTADISTYNILINIYGKAGFLERIEELFVEL 522

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
            E  F P+VV +T+ I  +       + +EVF++M + G +P+  T + L+   S   Q 
Sbjct: 523 KEKNFRPDVVTWTSRIGAYSRKKLYVKCLEVFEEMIDSGCAPDGGTAKVLLSACSSEEQV 582

Query: 475 WRAEEILQIM 484
            +   +L+ M
Sbjct: 583 EQVTSVLRTM 592



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/300 (27%), Positives = 151/300 (50%), Gaps = 10/300 (3%)

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R+ + +P++  +N+L+ A+  +    EA ++  ++  S   P   TY  +  AY   G  
Sbjct: 169 RKSSFQPDVICFNLLIDAYGQKFQYKEAESLYVQLLESRYVPTEDTYALLIKAYCMAGLI 228

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK------EALRFARTMKEYGVHPNL 318
           ++AE V+VEM+++ V P  +T G+ +     EG +K      EA+   + MK     P  
Sbjct: 229 ERAEVVLVEMQNHHVSP--KTIGVTVYNAYIEGLMKRKGNTEEAIDVFQRMKRDRCKPTT 286

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
             +NL+I  + +        ++   M+  +  P++ TY+ ++NA++  G  +K +EIF+ 
Sbjct: 287 ETYNLMINLYGKASKSYMSWKLYCEMRSHQCKPNICTYTALVNAFAREGLCEKAEEIFEQ 346

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           + + G++PD + Y+ L + Y R   P  A E+   M   G  P+   +  ++  +   G 
Sbjct: 347 LQEDGLEPDVYVYNALMESYSRAGYPYGAAEIFSLMQHMGCEPDRASYNIMVDAYGRAGL 406

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
              A  VF++M   G++P +K+   L+  YS+AR   + E I++ M   GV P   TF+L
Sbjct: 407 HSDAEAVFEEMKRLGIAPTMKSHMLLLSAYSKARDVTKCEAIVKEMSENGVEP--DTFVL 464


>gi|147825385|emb|CAN75494.1| hypothetical protein VITISV_030525 [Vitis vinifera]
          Length = 821

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/519 (25%), Positives = 237/519 (45%), Gaps = 72/519 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           VR+ T ++++    GK + A  +F  + + G  P+LVTY  +L     + + +N I  ++
Sbjct: 209 VRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLL 268

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  NG++ D    + VI+A    G ++EA   F ++K  G    T TYN+L++ +G A
Sbjct: 269 DEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGKA 328

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E++ +L  M +  N  P+L TYN LV A+       E  + +  M   G+ P+ +T
Sbjct: 329 GIYSEALSILKEMEKN-NCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAIT 387

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL------- 303
           Y T+  AY + G+ D+A     +M+ +G  PN  T   I+    K+ +++E +       
Sbjct: 388 YTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMR 447

Query: 304 ----------------------------RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
                                       R  R MK  G  PN   FN LI  +     + 
Sbjct: 448 SNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGSQI 507

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
            V ++   M +    P V TY+ ++NA +  G  +  + +  DM   G KP+  +YS++ 
Sbjct: 508 DVVKMYEEMIKAGFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLML 567

Query: 396 KGYVR---EQEPEKAEE------------LLMTMI--------------------ESGFH 420
             Y +    +  EK EE            LL T++                    + G+ 
Sbjct: 568 NCYAKGGNGRGIEKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYK 627

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           P++V+F +++S +  +   DRA E+   + E G+ P+L T+ +LM  Y+   + W+ EEI
Sbjct: 628 PDLVLFNSMLSIFAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEI 687

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           L+ ++  G  P   ++  + +     GL +EA R LS++
Sbjct: 688 LKGIQKSGGKPDLVSYNTVIKGFCRQGLMQEAIRTLSEM 726



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 216/446 (48%), Gaps = 37/446 (8%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K +C   + +  +L+ + +  G  +E     + +I  G  P+ +TYTT++ A     +
Sbjct: 341 MEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRKGIMPNAITYTTVINAYGKAGK 400

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +   S   Q++E+G  P+   +NA++    +   +EE +D    M+ +G  P + T+NT
Sbjct: 401 EDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDMRSNGCAPNSVTWNT 460

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           ++   G  G  +   ++   M   G  +PN  T+N L+ A+    +  +   +  +M  +
Sbjct: 461 MLAMCGNKGMHKYVNRVFREMKSCG-FEPNRDTFNALIGAYGRCGSQIDVVKMYEEMIKA 519

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG----- 297
           G  P V TYN +  A A+ G+ + AE VI++M+  G +PN  +  ++++ Y K G     
Sbjct: 520 GFTPCVTTYNALLNALARRGDWEAAESVILDMKSKGFKPNETSYSLMLNCYAKGGNGRGI 579

Query: 298 -KIKEALR--------------------------FARTMKEY---GVHPNLVIFNLLIKG 327
            KI+E +                             R  +E+   G  P+LV+FN ++  
Sbjct: 580 EKIEEEIYNGHIFPSWILLRTLVLANFKRRALMGMERAFQEFCKHGYKPDLVLFNSMLSI 639

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           F +    D   E+L L++E  + PD++TY+++M+ ++  G   K +EI   + K+G KPD
Sbjct: 640 FAKNKMYDRAHEMLRLIRESGLQPDLVTYNSLMDMYARGGECWKGEEILKGIQKSGGKPD 699

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
             +Y+ + KG+ R+   ++A   L  M  SG  P +V + T ++G+   G      EV  
Sbjct: 700 LVSYNTVIKGFCRQGLMQEAIRTLSEMTISGIRPCIVTYNTFVAGYSGKGMFSEVEEVIS 759

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQ 473
            M +H   PN  T++ ++ GY + ++
Sbjct: 760 YMIQHDCRPNELTYKIVVDGYCKGKK 785



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/351 (25%), Positives = 172/351 (49%), Gaps = 16/351 (4%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN----V 235
           + T++  Y   GK E ++ + + M + G + P L TYNV++  +     +  +WN    +
Sbjct: 212 WTTILHAYSRIGKYERAITMFEKMRKTG-LSPTLVTYNVMLDVY---GKMGRSWNKILGL 267

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
           + +M ++G++ D  T +T+ +A  + G  D+A +    ++  G      T   ++  + K
Sbjct: 268 LDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNSLLQVFGK 327

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI-MDRDGVDEVLALMKEFRVNPDVI 354
            G   EAL   + M++    P+LV +N L+  +V      +G D +  ++++  + P+ I
Sbjct: 328 AGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTMIRK-GIMPNAI 386

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           TY+T++NA+  AG  DK    F  M ++G  P+   Y+ +     ++   E+  ++L  M
Sbjct: 387 TYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRLEEMIDMLCDM 446

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAI-EVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
             +G  PN V + T+++  C +  M + +  VF +M   G  PN  TF  L+  Y     
Sbjct: 447 RSNGCAPNSVTWNTMLA-MCGNKGMHKYVNRVFREMKSCGFEPNRDTFNALIGAYGRCGS 505

Query: 474 PWRAEEILQIMKAFGVHPQKSTF--LLLAEARRATGLTKEAKRILSKIKNK 522
                ++ + M   G  P  +T+  LL A ARR  G  + A+ ++  +K+K
Sbjct: 506 QIDVVKMYEEMIKAGFTPCVTTYNALLNALARR--GDWEAAESVILDMKSK 554



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 89/368 (24%), Positives = 158/368 (42%), Gaps = 51/368 (13%)

Query: 185 KGYGIAGKPEESVKL-----LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           KG  ++G  + +V L     L+L SR  N K + +   ++VR    E   + A  ++ ++
Sbjct: 143 KGLDLSGNWKRAVLLFKWAILNLYSR--NEKIDNQLVELMVRILGRESQHSVALRLLDEI 200

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN--------------GR- 284
           +      DV  + TI  AY++ G+ ++A  +  +M   G+ P               GR 
Sbjct: 201 SVEEYSLDVRAWTTILHAYSRIGKYERAITMFEKMRKTGLSPTLVTYNVMLDVYGKMGRS 260

Query: 285 ---------------------TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
                                TC  +IS   +EG + EA +F   +K  G       +N 
Sbjct: 261 WNKILGLLDEMRSNGLEFDEFTCSTVISACGREGLLDEARKFFARLKSEGYVAGTFTYNS 320

Query: 324 LIKGFVEIMDRDGV-DEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           L+    ++  + G+  E L+++KE   N   PD++TY+ ++ A+  AGF ++  +  D M
Sbjct: 321 LL----QVFGKAGIYSEALSILKEMEKNNCPPDLVTYNELVAAYVRAGFHEEGADFIDTM 376

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            + GI P+A  Y+ +   Y +  + +KA      M ESG  PNV  +  I+        +
Sbjct: 377 IRKGIMPNAITYTTVINAYGKAGKEDKALSFFRQMKESGCVPNVCTYNAILGMLGKKSRL 436

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           +  I++   M  +G +PN  T+ T++              + + MK+ G  P + TF  L
Sbjct: 437 EEMIDMLCDMRSNGCAPNSVTWNTMLAMCGNKGMHKYVNRVFREMKSCGFEPNRDTFNAL 496

Query: 500 AEARRATG 507
             A    G
Sbjct: 497 IGAYGRCG 504



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 35/139 (25%), Positives = 69/139 (49%), Gaps = 1/139 (0%)

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           K D     ++ +   RE +   A  LL  +    +  +V  +TTI+  +   G  +RAI 
Sbjct: 171 KIDNQLVELMVRILGRESQHSVALRLLDEISVEEYSLDVRAWTTILHAYSRIGKYERAIT 230

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPW-RAEEILQIMKAFGVHPQKSTFLLLAEAR 503
           +F+KM + G+SP L T+  ++  Y +  + W +   +L  M++ G+   + T   +  A 
Sbjct: 231 MFEKMRKTGLSPTLVTYNVMLDVYGKMGRSWNKILGLLDEMRSNGLEFDEFTCSTVISAC 290

Query: 504 RATGLTKEAKRILSKIKNK 522
              GL  EA++  +++K++
Sbjct: 291 GREGLLDEARKFFARLKSE 309


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/417 (23%), Positives = 209/417 (50%), Gaps = 10/417 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  L+N L    + +E  +    ++  G+ P +VTYT+L+  L ++ R +    +  ++
Sbjct: 128 TLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRM 187

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES------GLTPTTSTYNTLIKGY 187
           ++ G  P+ + +  +I     +GN+  A+    +M            P   +YN +I   
Sbjct: 188 QKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDEL 247

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
              GK +E+ +L + M  +G V+P++ T++ L+   C E  + EA   +  M   G+ PD
Sbjct: 248 CKIGKWKEAKRLFNEMVDQG-VRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPD 306

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           + T+ ++   +   G+ D A+E+ + M   G +P+  +  ++I GYCK   ++EA++   
Sbjct: 307 LFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYN 366

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M   G  P++  F +L+KG           ++  ++K   V  ++   S  ++     G
Sbjct: 367 EMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNG 426

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            + +  E+F+++    +K D  +++ L  G  + ++ E A EL   + + G  P+VV + 
Sbjct: 427 CLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYC 486

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +I+G+C +G +D A  +F  M E+G +PNL T+  L+ G+ +     + EE+++++
Sbjct: 487 IMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNN---KLEEVVKLL 540



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 196/413 (47%), Gaps = 7/413 (1%)

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
           S++++  LL AL   K ++ + S+  ++   G+ P+    N +IN       + E +   
Sbjct: 90  SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAM 149

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
             +   G  P   TY +LIKG  +  +  E+ +L   M + G   PN+ TY  L++  C 
Sbjct: 150 AGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLG-CWPNVVTYGTLIKGLCR 208

Query: 226 EKNITEAWNVMHKMA------ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
             NI  A  +  +M       A   KP++ +YN I     + G+  +A+ +  EM   GV
Sbjct: 209 TGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGV 268

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           +P+  T   +I   CKEG + EA +F  TM   G+ P+L  F  LI+GF  + D D   E
Sbjct: 269 RPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKE 328

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +   M      PDVI+Y+ ++  +     +++  +++++M + G  PD   + +L KG  
Sbjct: 329 LFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLF 388

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
              +   A++L   +       N+ I +  + G C +G +  A+E+F+++  + +  +++
Sbjct: 389 LAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIE 448

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           +F  L+ G  +AR+   A E+ + +   G+ P   T+ ++       G    A
Sbjct: 449 SFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNA 501



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 79/326 (24%), Positives = 158/326 (48%), Gaps = 1/326 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           KP++ +Y  ++  L    ++     + +++ + G+ PD + F+A+I+   + G + EA  
Sbjct: 234 KPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKK 293

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
               M   G+ P   T+ +LI+G+ + G  + + +L   M  +G  +P++ +Y VL+  +
Sbjct: 294 FLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKG-YEPDVISYTVLIYGY 352

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C   N+ EA  + ++M   G  PD+ T+  +       G+   A+++   ++ + V  N 
Sbjct: 353 CKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNL 412

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
             C + + G CK G + EA+     +K Y +  ++  FN LI G  +    +   E+   
Sbjct: 413 YICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEK 472

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           + +  + PDV+TY  ++N +   G +D    +F  M + G  P+   YS L  G+ +  +
Sbjct: 473 LSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNK 532

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTI 429
            E+  +LL  MI+        I+T +
Sbjct: 533 LEEVVKLLHKMIQKDVSLAASIYTIV 558



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 161/336 (47%), Gaps = 20/336 (5%)

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++++  DLM R      ++ ++N+L+ A    K+ ++ +++  KM  +G+ P+  T N +
Sbjct: 79  QALQFFDLMMR------SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNIL 132

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                      +    +  +   G  P+  T   +I G C E +I EA R    M++ G 
Sbjct: 133 INCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGC 192

Query: 315 HPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKE-------FRVN--PDVITYSTIMNAWS 364
            PN+V +  LIKG      R G ++  L L +E       + +N  P++ +Y+ I++   
Sbjct: 193 WPNVVTYGTLIKGLC----RTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDELC 248

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G   + K +F++M   G++PD   +S L     +E    +A++ L TM+  G  P++ 
Sbjct: 249 KIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLF 308

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            FT++I G+C  G +D A E+F  M   G  P++ ++  L++GY +      A ++   M
Sbjct: 309 TFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEM 368

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
              G  P   TF +L +     G   +AK++   +K
Sbjct: 369 LRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVK 404



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/315 (25%), Positives = 157/315 (49%), Gaps = 6/315 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L+++L + G   EA+     ++  G  P L T+T+L+    +    +S   +  
Sbjct: 272 VVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFL 331

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G +PD I +  +I  + ++ N+EEAM  + +M   G  P   T+  L+KG  +AG
Sbjct: 332 SMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAG 391

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  ++ KL  ++     V  NL   +V +   C    + EA  + +++ +  MK D+ ++
Sbjct: 392 KVGDAKKLFGVVKPHA-VPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESF 450

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +     +  + + A E+  ++   G+QP+  T  I+I+G+CK G++  A    + M+E
Sbjct: 451 NCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEE 510

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD- 370
            G  PNL+ ++ L+ GF +    + ++EV+ L+ +  +  DV   ++I          D 
Sbjct: 511 NGCTPNLLTYSALLHGFYK---NNKLEEVVKLLHKM-IQKDVSLAASIYTIVEDMVSKDE 566

Query: 371 KCKEIFDDMGKAGIK 385
           KC+E  D + +  ++
Sbjct: 567 KCREWLDILQRFPVQ 581


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/479 (24%), Positives = 220/479 (45%), Gaps = 35/479 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++L  +G+  +A      ++E G +  +V+   +L  L++ +       ++S V + G
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCG 281

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG------ 191
             P+ + F  +IN F + G M+ A D F  M++ G+ P    Y+TLI GY  AG      
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341

Query: 192 -----KPEESVKL--------LDLMSREGN---------------VKPNLRTYNVLVRAW 223
                   + VKL        +D+  + G+               + PN+ TY +L++  
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C +  I EA+ +  ++   GM+P +VTY+++   + + G       +  +M   G  P+ 
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
              G+++ G  K+G +  A+RF+  M    +  N+V+FN LI G+  +   D   +V  L
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M  + + PDV T++T+M      G +++   +F  M K G++PDA AY  L   + +  +
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
           P    +L   M  +    ++ +   +I        ++ A + F+ + E  + P++ T+ T
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           ++ GY   R+   AE I +++K     P   T  +L            A R+ S +  K
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEK 700



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/421 (23%), Positives = 204/421 (48%), Gaps = 1/421 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+  L + G+  EA  ++  +++ G +PS+VTY++L+          S  ++  
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYE 450

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G  PD + +  +++  S+ G M  AM    KM    +      +N+LI G+    
Sbjct: 451 DMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E++K+  LM   G +KP++ T+  ++R    E  + EA  +  +M   G++PD + Y
Sbjct: 511 RFDEALKVFRLMGIYG-IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+  A+ ++ +     ++   M+ N +  +   C ++I    K  +I++A +F   + E
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             + P++V +N +I G+  +   D  + +  L+K     P+ +T + +++       MD 
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDG 689

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F  M + G KP+A  Y  L   + +  + E + +L   M E G  P++V ++ II 
Sbjct: 690 AIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIID 749

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G C  G +D A  +F +  +  + P++  +  L+ GY +  +   A  + + M   GV P
Sbjct: 750 GLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKP 809

Query: 492 Q 492
            
Sbjct: 810 D 810



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/484 (23%), Positives = 217/484 (44%), Gaps = 40/484 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N   +RG+   A  +F  + + G +P L+ Y+TL+            H + S
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q    G+  D + F++ I+ + +SG++  A   + +M   G++P   TY  LIKG    G
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  +   + + G ++P++ TY+ L+  +C   N+   + +   M   G  PDVV Y
Sbjct: 406 RIYEAFGMYGQILKRG-MEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIY 464

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +    ++ G    A    V+M    ++ N      +I G+C+  +  EAL+  R M  
Sbjct: 465 GVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGI 524

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR--VNPDVITYSTIMNAWS----- 364
           YG+ P++  F  +++  V IM+    + +    + F+  + PD + Y T+++A+      
Sbjct: 525 YGIKPDVATFTTVMR--VSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKP 582

Query: 365 TAGF------------------------MDKCKEI------FDDMGKAGIKPDAHAYSIL 394
           T G                         + KC  I      F+++ +  ++PD   Y+ +
Sbjct: 583 TIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTM 642

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             GY   +  ++AE +   +  + F PN V  T +I   C +  MD AI +F  M E G 
Sbjct: 643 ICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGS 702

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            PN  T+  LM  +S++     + ++ + M+  G+ P   ++ ++ +     G   EA  
Sbjct: 703 KPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATN 762

Query: 515 ILSK 518
           I  +
Sbjct: 763 IFHQ 766



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 168/381 (44%), Gaps = 26/381 (6%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSL-------------- 107
           FC     C  +RS   L   +I+ G P +   I+  L++G  K  L              
Sbjct: 436 FC----KCGNLRSGFALYEDMIKMGYPPDV-VIYGVLVDGLSKQGLMLHAMRFSVKMLGQ 490

Query: 108 ------VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
                 V + +L+       RF+    +   +   G+ PD   F  V+      G +EEA
Sbjct: 491 SIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEA 550

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           +  F++M + GL P    Y TLI  +    KP   ++L DLM R   +  ++   NV++ 
Sbjct: 551 LFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN-KISADIAVCNVVIH 609

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
                  I +A    + +    M+PD+VTYNT+   Y      D+AE +   ++     P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N  T  I+I   CK   +  A+R    M E G  PN V +  L+  F + +D +G  ++ 
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M+E  ++P +++YS I++     G +D+   IF     A + PD  AY+IL +GY + 
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 789

Query: 402 QEPEKAEELLMTMIESGFHPN 422
               +A  L   M+ +G  P+
Sbjct: 790 GRLVEAALLYEHMLRNGVKPD 810



 Score =  112 bits (279), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 83/373 (22%), Positives = 170/373 (45%), Gaps = 5/373 (1%)

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPT-TSTYNTLIKGYGIAGKPEESVKL 199
           DS++   ++N+   S  ++   D F K+   G+ P+  S +  ++      G+  +++  
Sbjct: 182 DSVY--RMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDF 239

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
             L+   G  +  + + N +++    ++ I  A  ++  +   G  P+VVT+ T+   + 
Sbjct: 240 HRLVMERG-FRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFC 297

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           + GE D+A ++   ME  G++P+      +I GY K G +    +        GV  ++V
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 357

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           +F+  I  +V+  D      V   M    ++P+V+TY+ ++      G + +   ++  +
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            K G++P    YS L  G+ +         L   MI+ G+ P+VVI+  ++ G    G M
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             A+    KM    +  N+  F +L+ G+    +   A ++ ++M  +G+ P  +TF  +
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537

Query: 500 AEARRATGLTKEA 512
                  G  +EA
Sbjct: 538 MRVSIMEGRLEEA 550



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 149/330 (45%), Gaps = 3/330 (0%)

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  ++++++    ++ G V P    Y +L  +      +    +   K+   G++P  V+
Sbjct: 160 GMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRVDLIADHFDKLCRGGIEPSGVS 218

Query: 251 -YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            +  +  A    GE  +A +    +   G +    +C  ++ G   + +I+ A R    +
Sbjct: 219 AHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLV 277

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            + G  PN+V F  LI GF +  + D   ++  +M++  + PD+I YST+++ +  AG +
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
               ++F      G+K D   +S     YV+  +   A  +   M+  G  PNVV +T +
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G C DG +  A  ++ ++ + G+ P++ T+ +L+ G+ +         + + M   G 
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            P    + +L +     GL   A R   K+
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487


>gi|224096624|ref|XP_002310676.1| predicted protein [Populus trichocarpa]
 gi|222853579|gb|EEE91126.1| predicted protein [Populus trichocarpa]
          Length = 424

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 181/371 (48%), Gaps = 7/371 (1%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   +A A FN +++   +P ++ +  LL+++   K++ ++ S+  ++E  G+  +    
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTL 78

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           + +IN F    +++     F K  + G  P    + TLI G    GK E +  LL  M  
Sbjct: 79  SILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGL 138

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G V P++ T N L+R +C++  I +   + H M + G+KPDV +Y+     Y +  + D
Sbjct: 139 VGCV-PDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKID 197

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A E+  EM H GV PN  T   +I   C+  + ++A    R M   G+ P+++ ++ L+
Sbjct: 198 EAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLL 257

Query: 326 KGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            GF +   +  +DE+L L +E +   V PD++ Y+ I+N    +  +   KE+   +   
Sbjct: 258 DGFCK---QGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVE 314

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+KPD H Y+ L  G  RE    +A  L   M E G  P    +  ++ G          
Sbjct: 315 GLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTV 374

Query: 443 IEVFDKMCEHG 453
           +++  +M + G
Sbjct: 375 VQLIHEMADRG 385



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 87/353 (24%), Positives = 172/353 (48%), Gaps = 1/353 (0%)

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           +L++S++   K +   ++F  +   G K ++ T + L+         +   S+  +  + 
Sbjct: 45  RLLSSVVRMKKYETVVSLFKEMEFRGIKYNVCTLSILINCFCFLHHVDYGFSVFGKTLKR 104

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G  PD + F  +I+     G  E A     +M   G  P   T N+L++GY   GK ++ 
Sbjct: 105 GFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKV 164

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            K+  LM  +G +KP++ +Y++ +  +C  + I EA  +  +M+  G+ P+ VTYNT+  
Sbjct: 165 RKIFHLMVSKG-LKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIK 223

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A  Q      A+ +  +M   G+ P+      ++ G+CK+G + E L   + M+   V P
Sbjct: 224 ALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKP 283

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +LV++ ++I G           EVL+ +    + PDV TY+ +++     G + +   +F
Sbjct: 284 DLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLF 343

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
             M + G  P + +Y++L +G ++  +     +L+  M + GF+ + V  T +
Sbjct: 344 RKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVTRTFL 396



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/384 (24%), Positives = 177/384 (46%), Gaps = 42/384 (10%)

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
           GN+++A+ +F +M +    P    +N L+       K E  V L   M   G +K N+ T
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEMEFRG-IKYNVCT 77

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
            ++L+  +C   ++   ++V  K    G KPDVV + T+     + G+ + A  ++ EM 
Sbjct: 78  LSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMG 137

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
             G  P+  TC  ++ GYC +GKI +  +    M   G+ P++  +++ I G+ ++   +
Sbjct: 138 LVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKV---E 194

Query: 336 GVDEVLALMKE--------------------------------FR------VNPDVITYS 357
            +DE + L  E                                FR      ++PD++ YS
Sbjct: 195 KIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYS 254

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           T+++ +   G +D+   +F +M +  +KPD   Y+I+  G  R ++ + A+E+L  +I  
Sbjct: 255 TLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVE 314

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  P+V  +T ++ G C +GS+  A+ +F KM E G  P   ++  L+ G  +       
Sbjct: 315 GLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTV 374

Query: 478 EEILQIMKAFGVHPQKSTFLLLAE 501
            +++  M   G +    T   L +
Sbjct: 375 VQLIHEMADRGFYADAVTRTFLKD 398



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 77/281 (27%), Positives = 139/281 (49%), Gaps = 1/281 (0%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
            T L++ +   GK + A  +   +   G  P +VT  +L+     Q + + +  I   + 
Sbjct: 113 FTTLIDGVCRIGKTELAAGLLKEMGLVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMV 172

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G+ PD   ++  IN + +   ++EAM+ F +M   G+ P   TYNTLIK    A +P 
Sbjct: 173 SKGLKPDVYSYSIFINGYCKVEKIDEAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPR 232

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++  L   M   G + P++  Y+ L+  +C + N+ E   +  +M    +KPD+V Y  I
Sbjct: 233 DAQVLFRKMCACG-LSPDILAYSTLLDGFCKQGNLDEMLVLFQEMQRRLVKPDLVVYTII 291

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                ++ +   A+EV+  +   G++P+  T   ++ G C+EG I EALR  R M+E G 
Sbjct: 292 INGMCRSRKVKDAKEVLSRLIVEGLKPDVHTYTALVDGLCREGSIIEALRLFRKMEEDGC 351

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
            P    +N+L++G ++  D   V +++  M +     D +T
Sbjct: 352 MPGSCSYNVLLQGCLQHNDTSTVVQLIHEMADRGFYADAVT 392



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 63/274 (22%), Positives = 127/274 (46%), Gaps = 2/274 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM     +GK  + + IF+ ++  G KP + +Y+  +      ++ +    +  
Sbjct: 145 VVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKIDEAMELFD 204

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+ P+++ +N +I A  ++    +A   F KM   GL+P    Y+TL+ G+   G
Sbjct: 205 EMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKMCACGLSPDILAYSTLLDGFCKQG 264

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E + L   M R   VKP+L  Y +++   C  + + +A  V+ ++   G+KPDV TY
Sbjct: 265 NLDEMLVLFQEMQRR-LVKPDLVVYTIIINGMCRSRKVKDAKEVLSRLIVEGLKPDVHTY 323

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     + G   +A  +  +ME +G  P   +  +++ G  +       ++    M +
Sbjct: 324 TALVDGLCREGSIIEALRLFRKMEEDGCMPGSCSYNVLLQGCLQHNDTSTVVQLIHEMAD 383

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
            G + + V    L K F+   D   + ++L L +
Sbjct: 384 RGFYADAVTRTFL-KDFLPGNDSPAIKQLLGLFE 416



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 2/224 (0%)

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR-VNPDVIT 355
           G + +AL     M +    P ++ FN L+   V +   + V  +   M EFR +  +V T
Sbjct: 19  GNLDDALASFNRMLDRNPQPPIIEFNRLLSSVVRMKKYETVVSLFKEM-EFRGIKYNVCT 77

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
            S ++N +     +D    +F    K G KPD   ++ L  G  R  + E A  LL  M 
Sbjct: 78  LSILINCFCFLHHVDYGFSVFGKTLKRGFKPDVVIFTTLIDGVCRIGKTELAAGLLKEMG 137

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G  P+VV   +++ G+CS G +D+  ++F  M   G+ P++ ++   + GY +  +  
Sbjct: 138 LVGCVPDVVTCNSLMRGYCSQGKIDKVRKIFHLMVSKGLKPDVYSYSIFINGYCKVEKID 197

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            A E+   M   GV P   T+  L +A       ++A+ +  K+
Sbjct: 198 EAMELFDEMSHRGVVPNAVTYNTLIKALCQALRPRDAQVLFRKM 241


>gi|223948189|gb|ACN28178.1| unknown [Zea mays]
 gi|413935735|gb|AFW70286.1| hypothetical protein ZEAMMB73_980179 [Zea mays]
          Length = 597

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 110/432 (25%), Positives = 210/432 (48%), Gaps = 6/432 (1%)

Query: 58  THCSFCMNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAA 116
           T C + + + S R  +     L+++  ++ +  EA+A +  L+E    P+  TY  LL A
Sbjct: 157 TVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYALLLRA 216

Query: 117 LTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPT 176
                + +    ++S+++ NG+ P +  +NA ++   ++   E+A++ + +MK+      
Sbjct: 217 YCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTN 276

Query: 177 TSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
           T TY  +I  YG A +P  S+++   M   G  KPN+ TY  LV A+  E    +A  V 
Sbjct: 277 TETYTLMINVYGKANQPMSSLRVFREMKSVG-CKPNICTYTALVNAFAREGLCEKAEEVF 335

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
            +M  +G +PDV  YN +  AY++ G    A E+   MEH G +P+  +  I++  + + 
Sbjct: 336 EEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRA 395

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
           G  +EA    + +K+ G+ P +    LL+       +    +EV+A + +  + PD    
Sbjct: 396 GLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFAL 455

Query: 357 STIMNAWSTAGFMDKCKEIFDDM----GKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
           + ++NA+  AG +D  + +F  M    G     PD   Y+++   Y R    ++ E    
Sbjct: 456 NAMLNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNAYGRAGYLDRMEAAFR 515

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
           ++   G   +VV +T+ I  +       + + VF++M + G  P+  T + L+   S+ R
Sbjct: 516 SLAARGLAADVVTWTSRIGAYARKKEYGQCLRVFEEMVDAGCYPDAGTAKVLLAACSDER 575

Query: 473 QPWRAEEILQIM 484
           Q  + + I++ M
Sbjct: 576 QVEQVKAIVRSM 587



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 88/342 (25%), Positives = 149/342 (43%), Gaps = 7/342 (2%)

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEES-VKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           W ++ S   P    YN LI  YG   +  E+    + L+  E    P   TY +L+RA+C
Sbjct: 161 WVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALL--EARCVPTEDTYALLLRAYC 218

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
               +  A  V+ +M  +G+ P    YN       +   +++A EV   M+    + N  
Sbjct: 219 GSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKERCRTNTE 278

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T  ++I+ Y K  +   +LR  R MK  G  PN+  +  L+  F      +  +EV   M
Sbjct: 279 TYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAEEVFEEM 338

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
           ++    PDV  Y+ +M A+S AG      EIF  M   G +PD  +Y+IL   + R    
Sbjct: 339 QQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAFGRAGLH 398

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           ++AE     + + G  P +     ++S     G++ R  EV  ++ + G+ P+      +
Sbjct: 399 QEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDTFALNAM 458

Query: 465 MWGYSEARQPWRAEEILQIMK----AFGVHPQKSTFLLLAEA 502
           +  Y  A +    E +   M+    A    P  ST+ ++  A
Sbjct: 459 LNAYGRAGRLDDMERLFAAMERGDGAIAGAPDTSTYNVMVNA 500



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/330 (22%), Positives = 154/330 (46%)

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E  + + + + R  + +P++  YN+L+ A+  ++ ++EA      +  +   P   TY  
Sbjct: 153 EPIITVCEWVLRRSSFRPDIICYNLLIDAYGQKRQLSEAEAAYMALLEARCVPTEDTYAL 212

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +  AY  +G+  +AE VI EM+ NG+ P        + G  K    ++A+   + MK+  
Sbjct: 213 LLRAYCGSGQLHRAEGVISEMQRNGIPPTATVYNAYLDGLLKARCSEKAVEVYQRMKKER 272

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
              N   + L+I  + +         V   MK     P++ TY+ ++NA++  G  +K +
Sbjct: 273 CRTNTETYTLMINVYGKANQPMSSLRVFREMKSVGCKPNICTYTALVNAFAREGLCEKAE 332

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+F++M +AG +PD +AY+ L + Y R   P+ A E+   M   G  P+   +  ++  +
Sbjct: 333 EVFEEMQQAGHEPDVYAYNALMEAYSRAGLPQGASEIFSLMEHMGCEPDRASYNILVDAF 392

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G    A   F ++ + G+ P +K+   L+  ++ +    R EE++  +   G+ P  
Sbjct: 393 GRAGLHQEAEAAFQELKQQGMRPTMKSHMLLLSAHARSGNVARCEEVMAQLHKSGLRPDT 452

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNKE 523
                +  A    G   + +R+ + ++  +
Sbjct: 453 FALNAMLNAYGRAGRLDDMERLFAAMERGD 482


>gi|357122970|ref|XP_003563186.1| PREDICTED: pentatricopeptide repeat-containing protein At5g42310,
           mitochondrial-like [Brachypodium distachyon]
          Length = 675

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 200/402 (49%), Gaps = 5/402 (1%)

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNS---IHSIMSQVEENGMDPDSIFFNAVINAFSESG 156
           E G  P L +Y+ LLA+L   +       +  ++  + E+ ++PD+  F+ +I+AF+ + 
Sbjct: 190 EHGFLPDLASYSHLLASLLNTRDPPDAAILERLLGDLRESRLEPDAPLFSDLISAFARAA 249

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
             + A+D     +  GLTP ++    LI   G AG+  E+  L       G +KP  R Y
Sbjct: 250 LPDAALDLLASAQAIGLTPRSNAVTALISALGGAGRVAEAEALFLEFFLAGEIKPRTRAY 309

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N L++ +    ++  A  V+ +M+  G+ PD  TY+ +  AY + G  + A  ++ EME 
Sbjct: 310 NALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAGRWESARILLKEMEA 369

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
           +GV+P+      I++G+   G  ++A    R M   GV P+   +N++I  F +      
Sbjct: 370 DGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYNVMIDTFGKYNCLGH 429

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             +    M+E  + PDV+T++T+++A    G  D+  E+F++M ++   P    Y+I+  
Sbjct: 430 AMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEMRESNCPPGTTTYNIMIN 489

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
               ++     E +L  M E G  PN++ +TT++  +   G    AIE  + M   G+ P
Sbjct: 490 LLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKEAIECIEVMKADGLKP 549

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLL 498
           +   +  L+  Y++      A  +++ M+A G+  + ST +L
Sbjct: 550 SPTMYHALVNAYAQRGLADHALNVVKAMRADGL--EASTVVL 589



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 174/370 (47%), Gaps = 40/370 (10%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F +  E     R+   L+   ++ G  + A+ + + + + G  P   TY+ L+ A T   
Sbjct: 296 FFLAGEIKPRTRAYNALLKGYVKIGSLKNAEQVLDEMSDCGVAPDEATYSLLVDAYTRAG 355

Query: 122 RFNSIHSIMSQVEENG-----------------------------------MDPDSIFFN 146
           R+ S   ++ ++E +G                                   + PD  F+N
Sbjct: 356 RWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMHASGVQPDRHFYN 415

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I+ F +   +  AMD F +M+E G+ P   T+NTLI  +   G+ + +++L + M RE
Sbjct: 416 VMIDTFGKYNCLGHAMDAFNRMREEGIEPDVVTWNTLIDAHRKGGRHDRAMELFEEM-RE 474

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            N  P   TYN+++     ++       ++ +M   G+ P+++TY T+   Y ++G   +
Sbjct: 475 SNCPPGTTTYNIMINLLGEQERWVGVETMLSEMKEQGLVPNIITYTTLVDVYGRSGRFKE 534

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A E I  M+ +G++P+      +++ Y + G    AL   + M+  G+  + V+ N L+ 
Sbjct: 535 AIECIEVMKADGLKPSPTMYHALVNAYAQRGLADHALNVVKAMRADGLEASTVVLNSLMN 594

Query: 327 GFVEIMDRDGVD--EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
            F E  DR  V+   VL  MKE  + PDVITY+T+M A       DK   I+++M  +G 
Sbjct: 595 AFGE--DRRVVEAFSVLQFMKENDLRPDVITYTTLMKALIRIEQFDKVPVIYEEMITSGC 652

Query: 385 KPDAHAYSIL 394
            PD  A ++L
Sbjct: 653 APDRKARAML 662


>gi|242074832|ref|XP_002447352.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
 gi|241938535|gb|EES11680.1| hypothetical protein SORBIDRAFT_06g033480 [Sorghum bicolor]
          Length = 888

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 201/389 (51%), Gaps = 7/389 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N  ++ GK  +A A+   +   G K +  TY+ L+        F +  SI   + ++G
Sbjct: 434 LINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSG 493

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   +N ++ AF + GNM+ A+  F +MK+  + P+  T+  +I+G+ +AG  + ++
Sbjct: 494 LQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRAL 553

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             LDLM R G   P + TYN L+     +  +  A +V+ KM+ +G+ P+  TY  I   
Sbjct: 554 DTLDLMRRSG-CAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRG 612

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           YA +G+  +A E   +++ +G++ +      ++   CK G+++ AL   R M    +  N
Sbjct: 613 YAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRN 672

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             I+N+LI G+    D     +++  MKE  + P++ T+++ +NA   AG M + + +  
Sbjct: 673 TFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINACCKAGDMQRAENVIQ 732

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS-- 435
           +M   G+KP+   ++ L KG+ +   P++A +    M  +G  P+   +  +++   S  
Sbjct: 733 EMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPDEAAYHCLVTSLLSRA 792

Query: 436 ---DGSMDRAI-EVFDKMCEHGVSPNLKT 460
              +GS    I  V  +M E+ ++ +L+T
Sbjct: 793 TVMEGSTYTGILSVCREMFENDLTVDLRT 821



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 102/414 (24%), Positives = 198/414 (47%), Gaps = 1/414 (0%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           + Y+ ++ A       +    ++ ++EE+G+D     ++++++ ++ + + ++ +  F +
Sbjct: 359 IIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFER 418

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           +KE G  P+  +Y  LI  Y   GK  +++ +   M   G +K N +TY++L+  + +  
Sbjct: 419 LKECGFRPSIISYGCLINLYVKIGKVPKALAVSKEMESHG-IKHNNKTYSMLINGFIHLH 477

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           +   A+++   M  SG++PD   YN +  A+ + G  D+A  +   M+   +QP+ RT  
Sbjct: 478 DFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFR 537

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
            II G+   G +K AL     M+  G  P ++ +N LI G +     +    VL  M   
Sbjct: 538 PIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIA 597

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            + P+  TY+ IM  ++ +G + K  E F  + ++G+K D + Y  L +   +    + A
Sbjct: 598 GIAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSA 657

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             +   M       N  I+  +I GW   G +  A ++  +M E G+ PN+ TF + +  
Sbjct: 658 LAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKEDGIPPNIHTFTSYINA 717

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             +A    RAE ++Q M   G+ P   TF  L +      L   A +   ++K+
Sbjct: 718 CCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKS 771



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 159/322 (49%), Gaps = 1/322 (0%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           ++ + L+N  I       A +IF ++I+ G +P    Y  L+ A       +    I  +
Sbjct: 464 KTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFER 523

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +++  M P +  F  +I  F+ +G+M+ A+DT   M+ SG  PT  TYN LI G     +
Sbjct: 524 MKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPTVMTYNALIHGLIRKHQ 583

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            E +V +LD MS  G + PN  TY +++R +    +I +A+    K+  SG+K DV  Y 
Sbjct: 584 VERAVSVLDKMSIAG-IAPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYE 642

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+  A  ++G    A  V  EM    +  N     I+I G+ + G + EA    + MKE 
Sbjct: 643 TLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNILIDGWARRGDVWEAADLMKQMKED 702

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ PN+  F   I    +  D    + V+  M +  + P+V T++T++  W+     D+ 
Sbjct: 703 GIPPNIHTFTSYINACCKAGDMQRAENVIQEMADVGLKPNVKTFTTLIKGWAKVSLPDRA 762

Query: 373 KEIFDDMGKAGIKPDAHAYSIL 394
            + F++M  AG+KPD  AY  L
Sbjct: 763 LKCFEEMKSAGLKPDEAAYHCL 784



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 103/427 (24%), Positives = 204/427 (47%), Gaps = 16/427 (3%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           +++CR  R + +         +P++ QA+ +   E   KPS   +  ++     +   + 
Sbjct: 221 EDACREFRRVLE--------SRPEDWQAVVSAF-ERIPKPSRREFGLMVVYYAKRGDKHH 271

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
             +    +   G++P++  F ++++A++ + +M  A+    +MK  GL  T  TY+ LI 
Sbjct: 272 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLEMTVVTYSILIA 331

Query: 186 GYGIAGKPEESVKLLDLMSREGNVK-PNLR--TYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           GYG     E + KL     +E   K  NL    Y+ ++ A C   N+  A  ++ +M   
Sbjct: 332 GYGKTNDAESADKLF----KEAKTKLDNLNGIIYSNIIHAHCQSGNMDRAEELVREMEED 387

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+   +  Y+++   Y    +  +   V   ++  G +P+  + G +I+ Y K GK+ +A
Sbjct: 388 GIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSIISYGCLINLYVKIGKVPKA 447

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L  ++ M+ +G+  N   +++LI GF+ + D      +   M +  + PD   Y+ ++ A
Sbjct: 448 LAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDMIKSGLQPDRAIYNLLVEA 507

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +   G MD+   IF+ M K  ++P    +  + +G+    + ++A + L  M  SG  P 
Sbjct: 508 FCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDMKRALDTLDLMRRSGCAPT 567

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           V+ +  +I G      ++RA+ V DKM   G++PN  T+  +M GY+ +    +A E   
Sbjct: 568 VMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGDIGKAFEYFT 627

Query: 483 IMKAFGV 489
            +K  G+
Sbjct: 628 KIKESGL 634



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 79/322 (24%), Positives = 156/322 (48%), Gaps = 1/322 (0%)

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P+   +  ++  Y   G    +    + M   G ++PN   +  LV A+   +++  A +
Sbjct: 251 PSRREFGLMVVYYAKRGDKHHARATFENMRARG-IEPNAFVFTSLVHAYAVARDMRGALS 309

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
            + +M + G++  VVTY+ +   Y +  +A+ A+++  E +      NG     II  +C
Sbjct: 310 CVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHC 369

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           + G +  A    R M+E G+   + +++ ++ G+    D      V   +KE    P +I
Sbjct: 370 QSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSII 429

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           +Y  ++N +   G + K   +  +M   GIK +   YS+L  G++   +   A  +   M
Sbjct: 430 SYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDM 489

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           I+SG  P+  I+  ++  +C  G+MDRAI +F++M +  + P+ +TF  ++ G++ A   
Sbjct: 490 IKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMKKERMQPSNRTFRPIIEGFAVAGDM 549

Query: 475 WRAEEILQIMKAFGVHPQKSTF 496
            RA + L +M+  G  P   T+
Sbjct: 550 KRALDTLDLMRRSGCAPTVMTY 571



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/280 (26%), Positives = 130/280 (46%), Gaps = 1/280 (0%)

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           KP    +  +   YA+ G+   A      M   G++PN      ++  Y     ++ AL 
Sbjct: 250 KPSRREFGLMVVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 309

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               MK  G+   +V +++LI G+ +  D +  D++    K    N + I YS I++A  
Sbjct: 310 CVEEMKSEGLEMTVVTYSILIAGYGKTNDAESADKLFKEAKTKLDNLNGIIYSNIIHAHC 369

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
            +G MD+ +E+  +M + GI      Y  +  GY   Q+ +K   +   + E GF P+++
Sbjct: 370 QSGNMDRAEELVREMEEDGIDAPIDVYHSMMHGYTVAQDEKKCLIVFERLKECGFRPSII 429

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +  +I+ +   G + +A+ V  +M  HG+  N KT+  L+ G+        A  I + M
Sbjct: 430 SYGCLINLYVKIGKVPKALAVSKEMESHGIKHNNKTYSMLINGFIHLHDFANAFSIFEDM 489

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
              G+ P ++ + LL EA    G    A RI  ++K KER
Sbjct: 490 IKSGLQPDRAIYNLLVEAFCKMGNMDRAIRIFERMK-KER 528



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 108/220 (49%), Gaps = 2/220 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C  TV +   L++ LI + + + A ++ + +   G  P+  TYT ++        
Sbjct: 559 MRRSGCAPTVMTYNALIHGLIRKHQVERAVSVLDKMSIAGIAPNEHTYTIIMRGYAASGD 618

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                   ++++E+G+  D   +  ++ A  +SG M+ A+    +M    +   T  YN 
Sbjct: 619 IGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNI 678

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+   G   E+  L+  M  +G + PN+ T+   + A C   ++  A NV+ +MA  
Sbjct: 679 LIDGWARRGDVWEAADLMKQMKEDG-IPPNIHTFTSYINACCKAGDMQRAENVIQEMADV 737

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
           G+KP+V T+ T+   +A+    D+A +   EM+  G++P+
Sbjct: 738 GLKPNVKTFTTLIKGWAKVSLPDRALKCFEEMKSAGLKPD 777


>gi|414887392|tpg|DAA63406.1| TPA: hypothetical protein ZEAMMB73_124662 [Zea mays]
          Length = 795

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 107/371 (28%), Positives = 196/371 (52%), Gaps = 10/371 (2%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIMSQVE 134
           T L+++    G+ ++A A+F  +++GG +P+LVTY  +  A + +   +  + +++  ++
Sbjct: 188 TALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVALVDSMK 247

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           E+G++ D   +N +I+     G   EA   F +MK +G  P   T+N+L+  YG A K E
Sbjct: 248 EDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHE 307

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           E++ +L  M   G   P++ TYN L+ A+  +  + EA  +  +M   GMKPDVVTY T+
Sbjct: 308 EAIGVLKRMENAG-CTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTL 366

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
            +   + G+ D A     EM  NG  PN  T   +I  +   GK  E +     ++  G 
Sbjct: 367 ISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGY 426

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEFR---VNPDVITYSTIMNAWSTAGFMD 370
            P++V +N L+  F     ++G+D EV  + KE +     P+  TY ++++++S  G  D
Sbjct: 427 VPDVVTWNTLLSVF----GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFD 482

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  EI+  M +AGI PD   Y+ +     R    E+AE+L   M++    P+ + +++++
Sbjct: 483 QAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLL 542

Query: 431 SGWCSDGSMDR 441
             + +   +D+
Sbjct: 543 HAYANAKKLDK 553



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 198/390 (50%), Gaps = 16/390 (4%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           EA AI    +E    P    YT L++A +   RF    ++  ++ + G+ P  + +N V 
Sbjct: 171 EASAI----LEAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVF 226

Query: 150 NAFSE-SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           +A+S+ S   +E +     MKE G+     TYNTLI      G   E+ ++ D M   G 
Sbjct: 227 HAYSKMSVPWKEVVALVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAG- 285

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            +P+  T+N L+  +   +   EA  V+ +M  +G  P VVTYN++ +AY ++G  ++A 
Sbjct: 286 FEPDKVTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEAL 345

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK-- 326
           E+  EME  G++P+  T   +ISG  + GKI  AL     M   G  PNL  +N LIK  
Sbjct: 346 ELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLH 405

Query: 327 GFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           G      R    E++A+  + R     PDV+T++T+++ +   G   +   +F +M KAG
Sbjct: 406 GV-----RGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAG 460

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
             P+   Y  L   Y R    ++A E+   MIE+G +P++  +  ++S     G  ++A 
Sbjct: 461 YIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAE 520

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           ++F +M +    P+  ++ +L+  Y+ A++
Sbjct: 521 KLFAEMVDRDCKPDELSYSSLLHAYANAKK 550



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 215/445 (48%), Gaps = 5/445 (1%)

Query: 80  NSLI----ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           N+LI     RG  +EA  +F+ +   G +P  VT+ +LL      ++      ++ ++E 
Sbjct: 259 NTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYGKARKHEEAIGVLKRMEN 318

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P  + +N++I+A+ + G +EEA++   +M+  G+ P   TY TLI G    GK + 
Sbjct: 319 AGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDA 378

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++     M R G   PNL TYN L++        TE   V   + ++G  PDVVT+NT+ 
Sbjct: 379 ALATYSEMVRNG-CSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLL 437

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           + + QNG   +   V  EM+  G  P   T   +IS Y + G   +A+   + M E G++
Sbjct: 438 SVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIY 497

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++  +N ++         +  +++ A M +    PD ++YS++++A++ A  +DK K +
Sbjct: 498 PDISTYNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTL 557

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            +D+    I+        L     +     + E+    +       ++ +   ++S +  
Sbjct: 558 SEDIYAERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGK 617

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +  + +  EV   M E+ ++ +  T+ +LM  YS      + E IL  +K+ G+ P + +
Sbjct: 618 NKMVKKVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYS 677

Query: 496 FLLLAEARRATGLTKEAKRILSKIK 520
           +  +  A    G  KEA R+ S++K
Sbjct: 678 YNTVIYAYGRKGQMKEASRLFSEMK 702



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 206/418 (49%), Gaps = 29/418 (6%)

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S + E    PD+  + A+++AFS +G   +A+  F +M + G+ P   TYN +   Y   
Sbjct: 173 SAILEAAPAPDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKM 232

Query: 191 GKP-EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI-TEAWNVMHKMAASGMKPDV 248
             P +E V L+D M  +G ++ +  TYN L+ + C  + +  EA  V  +M A+G +PD 
Sbjct: 233 SVPWKEVVALVDSMKEDG-IERDRYTYNTLI-SCCRRRGLHREAAQVFDEMKAAGFEPDK 290

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VT+N++   Y +  + ++A  V+  ME+ G  P+  T   +IS Y K+G ++EAL   + 
Sbjct: 291 VTFNSLLDVYGKARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQE 350

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVN---PDVITYSTIMNAWS 364
           M+  G+ P++V +  LI G    +DR G +D  LA   E   N   P++ TY+ ++    
Sbjct: 351 MEFRGMKPDVVTYTTLISG----LDRVGKIDAALATYSEMVRNGCSPNLCTYNALIKLHG 406

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G   +   +FDD+  AG  PD   ++ L   + +     +   +   M ++G+ P   
Sbjct: 407 VRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQNGLDSEVSGVFKEMKKAGYIPERD 466

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            + ++IS +   G  D+A+E++ +M E G+ P++ T+  ++   +   +  +AE++   M
Sbjct: 467 TYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDISTYNAVLSALARGGRWEQAEKLFAEM 526

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEA-EEDIPVESLER 541
                 P + ++                  +L    N ++ ++M+   EDI  E +ER
Sbjct: 527 VDRDCKPDELSY----------------SSLLHAYANAKKLDKMKTLSEDIYAERIER 568



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/434 (25%), Positives = 204/434 (47%), Gaps = 36/434 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   L+++ ++ G  +EA  +   +   G KP +VTYTTL++ L    + ++  +  
Sbjct: 324 SVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVVTYTTLISGLDRVGKIDAALATY 383

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S++  NG  P+   +NA+I      G   E M  F  ++ +G  P   T+NTL+  +G  
Sbjct: 384 SEMVRNGCSPNLCTYNALIKLHGVRGKFTEMMAVFDDLRSAGYVPDVVTWNTLLSVFGQN 443

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E   +   M + G + P   TY  L+ ++       +A  +  +M  +G+ PD+ T
Sbjct: 444 GLDSEVSGVFKEMKKAGYI-PERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIYPDIST 502

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI------KEALR 304
           YN + +A A+ G  +QAE++  EM     +P+  +   ++  Y    K+       E + 
Sbjct: 503 YNAVLSALARGGRWEQAEKLFAEMVDRDCKPDELSYSSLLHAYANAKKLDKMKTLSEDIY 562

Query: 305 FARTMKEYGVHPNLVIFNLLI-------KGFVEIMDR----------------------D 335
             R  +   +   LV+ N  +       K F E+  R                       
Sbjct: 563 AERIERHNWLVKTLVLVNNKVNNLPETEKAFQELRRRRCSLDINVLNAMVSIYGKNKMVK 622

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
            V+EVL+LM E  +N    TY+++M+ +S  G  +KC+ I  ++  +G++PD ++Y+ + 
Sbjct: 623 KVEEVLSLMMENSINHSAATYNSLMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVI 682

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
             Y R+ + ++A  L   M  SG  P++V +   I  + ++   + AI++   +   G  
Sbjct: 683 YAYGRKGQMKEASRLFSEMKCSGVKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCR 742

Query: 456 PNLKTFETLMWGYS 469
           PN +TF +++ GYS
Sbjct: 743 PNERTFNSILQGYS 756



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 2/208 (0%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP-EKAEE 409
           PD   Y+ +++A+S AG       +F  M   G++P    Y+++   Y +   P ++   
Sbjct: 182 PDASAYTALVSAFSRAGRFRDAVAVFQRMVDGGVQPALVTYNVVFHAYSKMSVPWKEVVA 241

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L+ +M E G   +   + T+IS     G    A +VFD+M   G  P+  TF +L+  Y 
Sbjct: 242 LVDSMKEDGIERDRYTYNTLISCCRRRGLHREAAQVFDEMKAAGFEPDKVTFNSLLDVYG 301

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEME 529
           +AR+   A  +L+ M+  G  P   T+  L  A    GL +EA  +  +++ +    ++ 
Sbjct: 302 KARKHEEAIGVLKRMENAGCTPSVVTYNSLISAYVKDGLLEEALELKQEMEFRGMKPDVV 361

Query: 530 AEEDIPVESLERLYHKEATTASYPNLLQ 557
               + +  L+R+   +A  A+Y  +++
Sbjct: 362 TYTTL-ISGLDRVGKIDAALATYSEMVR 388



 Score = 53.9 bits (128), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 28/123 (22%), Positives = 60/123 (48%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LM+     G  ++ ++I   +   G +P   +Y T++ A   + +      + S+++ +G
Sbjct: 646 LMHMYSRLGDCEKCESILTEIKSSGMRPDRYSYNTVIYAYGRKGQMKEASRLFSEMKCSG 705

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +N  I ++  +   EEA+D    +   G  P   T+N++++GY   G+  E+ 
Sbjct: 706 VKPDIVTYNIFIKSYVANIMFEEAIDLVRYLVTQGCRPNERTFNSILQGYSRHGRMVEAK 765

Query: 198 KLL 200
             L
Sbjct: 766 SFL 768


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 173/346 (50%), Gaps = 1/346 (0%)

Query: 167 KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNE 226
           +M+  GL P   TYN +I      GK  E+ ++L  M  EG + P+   Y  L+  +C  
Sbjct: 213 EMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG-IAPDGVIYTTLIDGFCKL 271

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
            N++ A+ +  +M    + PD +TY  +     Q G   +A+++  EM    ++P+  T 
Sbjct: 272 GNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTY 331

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             +I GYCKEGK+KEA      M + G+ PN+V +  L  G  +  + D  +E+L  M  
Sbjct: 332 TALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCR 391

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             +  ++ TY++++N    AG +D+  ++  DM  AG  PDA  Y+ L   Y + +E  +
Sbjct: 392 KGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVR 451

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A ELL  M++    P VV F  +++G+C  G ++   ++   M E G+ PN  T+ +L+ 
Sbjct: 452 AHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIK 511

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            Y          EI + M A GV P  +T+ +L +        KEA
Sbjct: 512 QYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEA 557



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/381 (28%), Positives = 189/381 (49%), Gaps = 3/381 (0%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           L + GK  EA+ +   +I  G  P  V YTTL+         +S + +  ++++  + PD
Sbjct: 233 LCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPD 292

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
            I + AVI    ++G + EA   F +M    L P   TY  LI GY   GK +E+  L +
Sbjct: 293 FITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHN 352

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M + G + PN+ TY  L    C    +  A  ++H+M   G++ ++ TYN++     + 
Sbjct: 353 QMLQMG-LTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKA 411

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           G  DQA +++ +ME  G  P+  T   ++  YCK  ++  A    R M +  + P +V F
Sbjct: 412 GNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTF 471

Query: 322 NLLIKGF-VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           N+L+ GF +  M  DG +++L  M E  + P+  TY++++  +     M    EI+  M 
Sbjct: 472 NVLMNGFCMSGMLEDG-EKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMC 530

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             G+ PD + Y+IL KG+ + +  ++A  L   M+  GF+  V  +  +I G+       
Sbjct: 531 AKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFL 590

Query: 441 RAIEVFDKMCEHGVSPNLKTF 461
            A E+F++M   G+  + + +
Sbjct: 591 EARELFEQMRREGLVADREIY 611



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/406 (24%), Positives = 198/406 (48%), Gaps = 1/406 (0%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G KP+  TY  ++  L    +      ++ ++   G+ PD + +  +I+ F + GN+  A
Sbjct: 218 GLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSA 277

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
              F +M++  ++P   TY  +I G    G+  E+ KL   M  +  ++P+  TY  L+ 
Sbjct: 278 YRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK-RLEPDEVTYTALID 336

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
            +C E  + EA+++ ++M   G+ P++VTY  +A    + GE D A E++ EM   G++ 
Sbjct: 337 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 396

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N  T   +++G CK G I +A++  + M+  G HP+ V +  L+  + +  +     E+L
Sbjct: 397 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 456

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M +  + P V+T++ +MN +  +G ++  +++   M + GI P+A  Y+ L K Y   
Sbjct: 457 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 516

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
                  E+   M   G  P+   +  +I G C   +M  A  +   M   G +  + ++
Sbjct: 517 NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSY 576

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
             L+ G+ + ++   A E+ + M+  G+   +  + + A+     G
Sbjct: 577 NALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEG 622



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 184/388 (47%), Gaps = 1/388 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T L++   + G    A  +F+ + +    P  +TYT ++  L    R      +  ++  
Sbjct: 262 TTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVC 321

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             ++PD + + A+I+ + + G M+EA     +M + GLTP   TY  L  G    G+ + 
Sbjct: 322 KRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDT 381

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +LL  M R+G ++ N+ TYN LV   C   NI +A  +M  M  +G  PD VTY T+ 
Sbjct: 382 ANELLHEMCRKG-LELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLM 440

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            AY ++ E  +A E++ +M    +QP   T  ++++G+C  G +++  +  + M E G+ 
Sbjct: 441 DAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIM 500

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN   +N LIK +    +     E+   M    V PD  TY+ ++     A  M +   +
Sbjct: 501 PNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFL 560

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
             DM   G      +Y+ L KG+ + ++  +A EL   M   G   +  I+         
Sbjct: 561 HRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYD 620

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFET 463
           +G M+  +E+ D+  E  +  +++T  T
Sbjct: 621 EGKMELTLELCDEAIEKCLVGDIQTKNT 648



 Score =  145 bits (365), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 145/282 (51%)

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
           ++ +M   G+KP+  TYN +     + G+  +AE V+ EM   G+ P+G     +I G+C
Sbjct: 210 LIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFC 269

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           K G +  A R    M++  + P+ + +  +I G  +       D++   M   R+ PD +
Sbjct: 270 KLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEV 329

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           TY+ +++ +   G M +   + + M + G+ P+   Y+ LA G  +  E + A ELL  M
Sbjct: 330 TYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEM 389

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
              G   N+  + ++++G C  G++D+A+++   M   G  P+  T+ TLM  Y ++R+ 
Sbjct: 390 CRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREM 449

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
            RA E+L+ M    + P   TF +L      +G+ ++ +++L
Sbjct: 450 VRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLL 491



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 74/255 (29%), Positives = 136/255 (53%)

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           ++I EM+  G++PN  T   +I   CK GK+ EA R  R M   G+ P+ VI+  LI GF
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
            ++ +      +   M++ +++PD ITY+ ++      G + +  ++F +M    ++PD 
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 328

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             Y+ L  GY +E + ++A  L   M++ G  PN+V +T +  G C  G +D A E+  +
Sbjct: 329 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 388

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGL 508
           MC  G+  N+ T+ +L+ G  +A    +A ++++ M+  G HP   T+  L +A   +  
Sbjct: 389 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 448

Query: 509 TKEAKRILSKIKNKE 523
              A  +L ++ ++E
Sbjct: 449 MVRAHELLRQMLDRE 463



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 112/245 (45%), Gaps = 6/245 (2%)

Query: 67  ESCR-----TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           E CR      + +   L+N L + G   +A  +  ++   G  P  VTYTTL+ A    +
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
                H ++ Q+ +  + P  + FN ++N F  SG +E+       M E G+ P  +TYN
Sbjct: 448 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYN 507

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           +LIK Y I      + ++   M  +G V P+  TYN+L++  C  +N+ EAW +   M  
Sbjct: 508 SLIKQYCIRNNMRATTEIYRGMCAKG-VVPDGNTYNILIKGHCKARNMKEAWFLHRDMVG 566

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G    V +YN +   + +  +  +A E+  +M   G+  +     I       EGK++ 
Sbjct: 567 KGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMEL 626

Query: 302 ALRFA 306
            L   
Sbjct: 627 TLELC 631



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/190 (25%), Positives = 84/190 (44%), Gaps = 1/190 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +++E   TV +   LMN     G  ++ + +   ++E G  P+  TY +L+    I+   
Sbjct: 460 LDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNM 519

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            +   I   +   G+ PD   +N +I    ++ NM+EA      M   G   T S+YN L
Sbjct: 520 RATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNAL 579

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           IKG+    K  E+ +L + M REG V  +   YN+      +E  +     +  +     
Sbjct: 580 IKGFYKRKKFLEARELFEQMRREGLV-ADREIYNIFADINYDEGKMELTLELCDEAIEKC 638

Query: 244 MKPDVVTYNT 253
           +  D+ T NT
Sbjct: 639 LVGDIQTKNT 648


>gi|297840249|ref|XP_002888006.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297333847|gb|EFH64265.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 485

 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 197/380 (51%), Gaps = 6/380 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N L    +   A ++   +++ G++P +VT ++L+       R      ++S++EE  
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEMR 169

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              D + +N +I+ F ++G +  A+  F +M+  G+   T TYN+L+ G   +G+  ++ 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 198 KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +L+ D++ R+  + PN+ T+  L+ A+  E    EA     +M    + PDV TYN++  
Sbjct: 230 RLMRDMVMRD--IVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIH 287

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
               +G+ D+A++++  M   G  P+  T   +I+G+CK  ++ E  +  R M + G+  
Sbjct: 288 GLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVV 347

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           + V FN +I+G+ +    D   E+ + M      P++ TYS ++        ++K   +F
Sbjct: 348 DTVTFNTIIQGYFQAGRPDAAQEIFSRMGS---RPNIRTYSILLYGLCYNWRVEKALVLF 404

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           + M K+ ++ D   Y+I+  G       E A +L  ++   G  P+VV +TT+ISG+C  
Sbjct: 405 ESMQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTYTTMISGFCRK 464

Query: 437 GSMDRAIEVFDKMCEHGVSP 456
              D+A  ++ KM E G+ P
Sbjct: 465 RLWDKADFLYRKMQEDGLLP 484



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 118/470 (25%), Positives = 221/470 (47%), Gaps = 20/470 (4%)

Query: 24  VKKGWGQMIPAKK--NNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNS 81
           + + WG+    K+   N  E   L+ N   +   P              ++   +KL+++
Sbjct: 33  ISRFWGRAFTTKRLSMNLDEAIDLFCNMIQSRPLP--------------SIVEFSKLLSN 78

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           + +        ++F+N+   G    L TY  ++  L    RF    S++ ++ + G +PD
Sbjct: 79  IAKSKNYDLVISLFHNMEICGIGHDLYTYNIVINCLCRCSRFVIALSVVGKMMKFGYEPD 138

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
            +  +++IN F +   +  A+D   KM+E         YNT+I G+   G    ++ L  
Sbjct: 139 VVTVSSLINGFCQGNRVFGAVDLVSKMEEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFG 198

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M R+G V+ +  TYN LV   C     ++A  +M  M    + P+V+T+  +  A+ + 
Sbjct: 199 RMERDG-VRADTVTYNSLVTGLCCSGRRSDAARLMRDMVMRDIVPNVITFTALINAFVRE 257

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           G+  +A++   EM    + P+  T   +I G C  G++ EA +    M   G  P++V +
Sbjct: 258 GKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGLCMHGQVDEAKQILDLMVTKGCFPDVVTY 317

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
           N LI GF +    D   +++  M +  +  D +T++TI+  +  AG  D  +EIF  MG 
Sbjct: 318 NTLINGFCKTKRVDEGTKLVREMSQRGLVVDTVTFNTIIQGYFQAGRPDAAQEIFSRMGS 377

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
              +P+   YSIL  G       EKA  L  +M +S    ++  +  +I G C  G+++ 
Sbjct: 378 ---RPNIRTYSILLYGLCYNWRVEKALVLFESMQKSEMELDITTYNIVIHGMCMIGNVED 434

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           A ++F  +   G+ P++ T+ T++ G+   R   +A+ + + M+  G+ P
Sbjct: 435 AWDLFCSLSFKGLEPDVVTYTTMISGFCRKRLWDKADFLYRKMQEDGLLP 484



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 194/408 (47%), Gaps = 4/408 (0%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
            EA  +F N+I+    PS+V ++ LL+ +   K ++ + S+   +E  G+  D   +N V
Sbjct: 51  DEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYNIV 110

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           IN          A+    KM + G  P   T ++LI G+    +   +V L+  M  E  
Sbjct: 111 INCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKME-EMR 169

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
            K ++  YN ++  +C    +  A  +  +M   G++ D VTYN++ T    +G    A 
Sbjct: 170 CKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDAA 229

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            ++ +M    + PN  T   +I+ + +EGK  EA +F   M    + P++  +N +I G 
Sbjct: 230 RLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHGL 289

Query: 329 VEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDA 388
                 D   ++L LM      PDV+TY+T++N +     +D+  ++  +M + G+  D 
Sbjct: 290 CMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGLVVDT 349

Query: 389 HAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDK 448
             ++ + +GY +   P+ A+E+   M   G  PN+  ++ ++ G C +  +++A+ +F+ 
Sbjct: 350 VTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSILLYGLCYNWRVEKALVLFES 406

Query: 449 MCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           M +  +  ++ T+  ++ G         A ++   +   G+ P   T+
Sbjct: 407 MQKSEMELDITTYNIVIHGMCMIGNVEDAWDLFCSLSFKGLEPDVVTY 454



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 92/345 (26%), Positives = 170/345 (49%), Gaps = 4/345 (1%)

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
           S N++EA+D F  M +S   P+   ++ L+     +   +  + L   M   G +  +L 
Sbjct: 47  SMNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICG-IGHDLY 105

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TYN+++   C       A +V+ KM   G +PDVVT +++   + Q      A +++ +M
Sbjct: 106 TYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKM 165

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
           E    + +      II G+CK G +  AL     M+  GV  + V +N L+ G      R
Sbjct: 166 EEMRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRR 225

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
                ++  M    + P+VIT++ ++NA+   G   + K+ +++M +  I PD   Y+ +
Sbjct: 226 SDAARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSM 285

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G     + ++A+++L  M+  G  P+VV + T+I+G+C    +D   ++  +M + G+
Sbjct: 286 IHGLCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQRGL 345

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             +  TF T++ GY +A +P  A+EI   M   G  P   T+ +L
Sbjct: 346 VVDTVTFNTIIQGYFQAGRPDAAQEIFSRM---GSRPNIRTYSIL 387



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 69/295 (23%), Positives = 137/295 (46%)

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           N+ EA ++   M  S   P +V ++ + +  A++   D    +   ME  G+  +  T  
Sbjct: 49  NLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTYN 108

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           I+I+  C+  +   AL     M ++G  P++V  + LI GF +     G  ++++ M+E 
Sbjct: 109 IVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEEM 168

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
           R   DV+ Y+TI++ +   G ++    +F  M + G++ D   Y+ L  G         A
Sbjct: 169 RCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSDA 228

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
             L+  M+     PNV+ FT +I+ +  +G    A + +++M    + P++ T+ +++ G
Sbjct: 229 ARLMRDMVMRDIVPNVITFTALINAFVREGKFLEAKKFYEEMIRRCIDPDVFTYNSMIHG 288

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
                Q   A++IL +M   G  P   T+  L      T    E  +++ ++  +
Sbjct: 289 LCMHGQVDEAKQILDLMVTKGCFPDVVTYNTLINGFCKTKRVDEGTKLVREMSQR 343



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 39/185 (21%), Positives = 85/185 (45%)

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
           M+ D   ++   M + R  P ++ +S +++  + +   D    +F +M   GI  D + Y
Sbjct: 48  MNLDEAIDLFCNMIQSRPLPSIVEFSKLLSNIAKSKNYDLVISLFHNMEICGIGHDLYTY 107

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           +I+     R      A  ++  M++ G+ P+VV  +++I+G+C    +  A+++  KM E
Sbjct: 108 NIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFGAVDLVSKMEE 167

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
                ++  + T++ G+ +      A  +   M+  GV     T+  L      +G   +
Sbjct: 168 MRCKLDVVIYNTIIDGFCKTGLVNNALVLFGRMERDGVRADTVTYNSLVTGLCCSGRRSD 227

Query: 512 AKRIL 516
           A R++
Sbjct: 228 AARLM 232


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 182/361 (50%), Gaps = 6/361 (1%)

Query: 164 TFW-KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
           TF+ ++ E G  P    YN LI  +   G   ++  + + + + G ++P   ++N L+  
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG-LRPTTVSFNTLING 267

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C  +N+ E + +   M  + + PDV TY+ +     + G  D AE++  EM+  G++PN
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
           G T   +I G C+  +I  A+     M   GV P+LV++N L+ G  ++ D +   +++ 
Sbjct: 328 GITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M+   + PD ITY+T+++ +   G ++   EI   M + G+  D  A++ L  G+ R+ 
Sbjct: 388 EMRMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
               AE  L  M+E+G  P+   +T +I G+C  G++    ++  +M  +G  P + T+ 
Sbjct: 448 RVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYN 507

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            LM G  +  Q   A  +L+ M   GV P   T+ +L E     G  ++    L K++N+
Sbjct: 508 VLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAED----LLKLRNE 563

Query: 523 E 523
           +
Sbjct: 564 K 564



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 185/359 (51%), Gaps = 10/359 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   + G  ++A+ IFN + + G +P+ V++ TL+  L   +  +    +   +EEN 
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   ++ +I+   + G ++ A   F +M++ GL P   T+  LI G   + + + ++
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAM 348

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M   G VKP+L  YN L+   C   ++ +A  ++ +M   GMKPD +TY T+   
Sbjct: 349 NTYHQMLTMG-VKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDG 407

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G+ + A E+   M   GV  +      +ISG+C++G++++A R  R M E G+ P+
Sbjct: 408 YCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPD 467

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKE 374
              + ++I G+ +   +  V     L+KE ++N   P VITY+ +MN     G M     
Sbjct: 468 DATYTMVIDGYCK---KGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANM 524

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           + + M   G+ PD   Y+IL +G+ +     KAE+LL    E G   +   +T+++S +
Sbjct: 525 LLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDYAYYTSLVSEY 580



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 85/328 (25%), Positives = 155/328 (47%), Gaps = 4/328 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  S   L+N L +     E   +   + E    P + TY+ L+  L  + R +    + 
Sbjct: 257 TTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLF 316

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++++ G+ P+ I F A+I+    S  ++ AM+T+ +M   G+ P    YNTL+ G    
Sbjct: 317 DEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKV 376

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   ++ KL+D M   G +KP+  TY  L+  +C E ++  A  +   M   G+  D V 
Sbjct: 377 GDVNKARKLVDEMRMVG-MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVA 435

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +  + + + ++G    AE  + EM   G++P+  T  ++I GYCK+G +K   +  + M+
Sbjct: 436 FTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQ 495

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  P ++ +N+L+ G  +       + +L  M    V PD ITY+ ++      G   
Sbjct: 496 INGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG--- 552

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           K +++     + G+  D   Y+ L   Y
Sbjct: 553 KAEDLLKLRNEKGLIVDYAYYTSLVSEY 580


>gi|297816792|ref|XP_002876279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322117|gb|EFH52538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 228/476 (47%), Gaps = 43/476 (9%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T ++ + +++G  ++A    + ++  G   ++V  T+L+          S   +  ++E 
Sbjct: 307 TSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALDLFYKMEN 366

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P+S+ F+ +I  FS++G ME+A++ + KM+  GLTP+    +T+I+G+    K EE
Sbjct: 367 EGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESLGLTPSVFHVHTIIQGWLKGQKHEE 426

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++KL D     G    N+   N ++   C +  I +A  ++ KM + G+ P+VV+YN + 
Sbjct: 427 ALKLFDESFETG--LANVFICNTILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVM 484

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            A+ +    D A  V   M   G++PN  T  I+I G  K    +  L     M    + 
Sbjct: 485 LAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIE 544

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR--------------------------- 348
            N V++  +I G  ++       E+LA M E +                           
Sbjct: 545 VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVA 604

Query: 349 ---------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
                    ++P+VITY+++M+       MD+  E+ D+M   G+K D  AY  L  G+ 
Sbjct: 605 AYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFC 664

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           ++   E A  L   ++E G +P+  ++ ++ISG+ + G+M  A++++ KM + G+  +L 
Sbjct: 665 KKSNMESASALFSELLEEGLNPSQPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLG 724

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           T+ TL+ G  +      A ++   M+A G+ P +  + ++       GL+K+ + +
Sbjct: 725 TYTTLIDGLLKEGNLILASDLYTEMQAVGLVPDEIMYTVI-----VNGLSKKGQFV 775



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 95/403 (23%), Positives = 205/403 (50%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L ++GK  +A  +   +   G  P++V+Y  ++ A   +K  +   ++ S + E G
Sbjct: 448 ILSWLCKQGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKG 507

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P++  ++ +I+   ++ + +  ++   +M  S +      Y T+I G    G+  ++ 
Sbjct: 508 LKPNNYTYSILIDGCFKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 567

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL  M  E     +  +YN ++  +  E  +  A     +M A+G+ P+V+TY ++   
Sbjct: 568 ELLANMIEEKRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDG 627

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +N   DQA E+  EM++ GV+ +    G +I G+CK+  ++ A      + E G++P+
Sbjct: 628 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPS 687

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             ++N LI GF  + +     ++   M +  +  D+ TY+T+++     G +    +++ 
Sbjct: 688 QPVYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKEGNLILASDLYT 747

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G+ PD   Y+++  G  ++ +  K  ++   M ++   PNV+I+  +I+G   +G
Sbjct: 748 EMQAVGLVPDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 807

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           ++D A  + D+M + G+ P+  TF+ L+ G     QP RA  +
Sbjct: 808 NLDEAFRLHDEMLDKGILPDGATFDILVSGKVGKFQPIRAASL 850



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 109/487 (22%), Positives = 210/487 (43%), Gaps = 70/487 (14%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+   L+N+  +  +   A  I N ++E G  P +      L+AL  +        + S+
Sbjct: 163 RAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSR 222

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +   G+D D+     ++ A        EA++ F +  E G  P +  Y+  ++       
Sbjct: 223 MVAIGVDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLN 282

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
              +  LL  M  +    P+  TY  ++ A   + N+ +A     +M + G+  +VV   
Sbjct: 283 LAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAAT 342

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++ T + +N +   A ++  +ME+ G  PN  T  ++I  + K G++++AL F + M+  
Sbjct: 343 SLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMESL 402

Query: 313 GVHPNLVIFNLLIKGF---------VEIMDR-------------------------DGVD 338
           G+ P++   + +I+G+         +++ D                          D   
Sbjct: 403 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFICNTILSWLCKQGKIDKAT 462

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           E+L  M+   + P+V++Y+ +M A      MD  + +F +M + G+KP+ + YSIL  G 
Sbjct: 463 ELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYTYSILIDGC 522

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC------------------------ 434
            +  + +   E++  M  S    N V++ TII+G C                        
Sbjct: 523 FKNHDEQNVLEVVNQMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRFCVS 582

Query: 435 ------------SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
                        +G MD A+  +++MC +G+SPN+ T+ +LM G  +  +  +A E+  
Sbjct: 583 CMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQALEMRD 642

Query: 483 IMKAFGV 489
            MK  GV
Sbjct: 643 EMKNKGV 649



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 73/264 (27%), Positives = 133/264 (50%), Gaps = 1/264 (0%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           K  C +  S   +++  I+ G+   A A +  +   G  P+++TYT+L+  L    R + 
Sbjct: 577 KRFCVSCMSYNSIIDGFIKEGEMDYAVAAYEEMCANGISPNVITYTSLMDGLCKNNRMDQ 636

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              +  +++  G+  D   + A+I+ F +  NME A   F ++ E GL P+   YN+LI 
Sbjct: 637 ALEMRDEMKNKGVKLDIPAYGALIHGFCKKSNMESASALFSELLEEGLNPSQPVYNSLIS 696

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G+   G    ++ L   M ++G ++ +L TY  L+     E N+  A ++  +M A G+ 
Sbjct: 697 GFRNLGNMVAALDLYKKMLKDG-LRCDLGTYTTLIDGLLKEGNLILASDLYTEMQAVGLV 755

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PD + Y  I    ++ G+  +  ++  EM+ N V PN      +I+G+ +EG + EA R 
Sbjct: 756 PDEIMYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 815

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFV 329
              M + G+ P+   F++L+ G V
Sbjct: 816 HDEMLDKGILPDGATFDILVSGKV 839



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 166/367 (45%), Gaps = 3/367 (0%)

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           G + +S  FN ++NA+S+    + A+D   +M E G+ P     N  +          E+
Sbjct: 157 GFEVNSRAFNYLLNAYSKDRQTDYAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEA 216

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            +L   M   G V  +  T  +L+RA   E+   EA  V  +    G +PD + Y+    
Sbjct: 217 KELYSRMVAIG-VDGDNGTTQLLMRASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQ 275

Query: 257 AYAQNGEADQAEEVIVEM-EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
           A  +      A  ++ EM E     P+  T   +I    K+G +++A+R+   M   G+ 
Sbjct: 276 ACCKTLNLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGIS 335

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            N+V    LI G  +  D     ++   M+    +P+ +T+S ++  +S  G M+K  E 
Sbjct: 336 MNVVAATSLITGHCKNNDLGSALDLFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEF 395

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           +  M   G+ P       + +G+++ Q+ E+A +L     E+G   NV I  TI+S  C 
Sbjct: 396 YKKMESLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFICNTILSWLCK 454

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G +D+A E+  KM   G+ PN+ ++  +M  +   +    A  +   M   G+ P   T
Sbjct: 455 QGKIDKATELLRKMESRGIGPNVVSYNNVMLAHCRKKNMDLARTVFSNMLEKGLKPNNYT 514

Query: 496 FLLLAEA 502
           + +L + 
Sbjct: 515 YSILIDG 521



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 77/342 (22%), Positives = 141/342 (41%), Gaps = 11/342 (3%)

Query: 189 IAGKPEE--SVKLLD-LMSREGNVKPNLRTYNVLVRAWCNEKNITEA-WNVMHKMAAS-- 242
           +A KPE+     ++D L++R  N +  LR YN   R W       +  W ++H +  S  
Sbjct: 62  LAAKPEQKDDASVIDVLLNRRNNPEAALRFYN-WARPWRGSFEDGDVFWVLIHILVTSPE 120

Query: 243 --GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
             G   D++    ++T+      +     ++   +  G + N R    +++ Y K+ +  
Sbjct: 121 TYGRASDLLI-RYVSTSNPTPMASVLVSNLVDSAKLFGFEVNSRAFNYLLNAYSKDRQTD 179

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
            A+     M E GV P +   N  +   V+        E+ + M    V+ D  T   +M
Sbjct: 180 YAVDIVNQMLELGVIPFVPYVNRTLSALVQRNSITEAKELYSRMVAIGVDGDNGTTQLLM 239

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
            A        +  E+F    + G +PD+  YS+  +   +      A  LL  M E    
Sbjct: 240 RASLREEKPAEALEVFSRAIERGAEPDSLLYSLAVQACCKTLNLAMANSLLREMKEKKLC 299

Query: 421 -PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            P+   +T++I      G+M+ AI   D+M   G+S N+    +L+ G+ +      A +
Sbjct: 300 VPSQETYTSVILASVKQGNMEDAIRWKDEMVSDGISMNVVAATSLITGHCKNNDLGSALD 359

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           +   M+  G  P   TF +L E     G  ++A     K+++
Sbjct: 360 LFYKMENEGPSPNSVTFSVLIERFSKNGEMEKALEFYKKMES 401


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 182/367 (49%), Gaps = 6/367 (1%)

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
           G   P +  Y  LL AL  +    ++  +   + + G+DP+   +N +I A  ++  ++ 
Sbjct: 63  GCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDA 122

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A     +M   G  P   ++ T++ G    G+ EE+   L          P   +YN +V
Sbjct: 123 ARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFL------AETVPVQASYNAVV 176

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
            A C E  + E ++V+++M   G++P+VVTY TI  A+ +  E   A  ++  M   G  
Sbjct: 177 HALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCT 236

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           PN  T   ++ G+ ++GK+ +AL     M + G  P+ + +N+LI+G   I D  G  + 
Sbjct: 237 PNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDF 296

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
              MK   + P+  TYST+++ +S AG +D    I+++M  +G KP+   Y+ +     +
Sbjct: 297 FNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCK 356

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
           +   ++AE L+  M+     PN V F T+I   C  G + RA+ VF  M  +G  PN +T
Sbjct: 357 KMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRT 416

Query: 461 FETLMWG 467
           +  L+ G
Sbjct: 417 YNELLHG 423



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 192/394 (48%), Gaps = 5/394 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++++L    +  E  ++ N +++ G +P++VTYTT++ A    +      +I++++
Sbjct: 171 SYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARM 230

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P+ + F A++  F E G + +A+  +  M + G  P+T +YN LI+G    G  
Sbjct: 231 VSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDL 290

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + ++   + M R   + PN  TY+ LV  + N  ++  A  + ++M +SG KP+VV Y  
Sbjct: 291 KGALDFFNSMKRNA-LLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTN 349

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     +    DQAE +I +M  +   PN  T   +I   C  G++  AL     M+  G
Sbjct: 350 MIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNG 409

Query: 314 VHPNLVIFNLLIKG-FVEIMDRDGVDEVLALMKE-FRVNPDVITYSTIMNAWSTAGFMDK 371
            HPN   +N L+ G F E   +D    V+ ++   F ++  ++TY+T++N          
Sbjct: 410 CHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELS--LVTYNTVINCLCQMCMRKH 467

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +   M   GI+PDA  ++ +   Y +E +   A  LL  M       NVV +T +IS
Sbjct: 468 AMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILIS 527

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
             C+ G +  A+    KM   G+ PN  T+  L+
Sbjct: 528 ELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLV 561



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/451 (21%), Positives = 191/451 (42%), Gaps = 33/451 (7%)

Query: 68  SCRT--VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
            CR   VR    L+++L+          +++N+ + G  P++ TY  L+ AL    R ++
Sbjct: 63  GCRDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDA 122

Query: 126 IHSIMSQVEENGMDPDSIF------------------------------FNAVINAFSES 155
              ++ ++   G  PD +                               +NAV++A    
Sbjct: 123 ARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGE 182

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
             M E      +M + GL P   TY T++  +  A +   +  +L  M   G   PN+ T
Sbjct: 183 FRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMG-CTPNVLT 241

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           +  LV+ +  +  + +A ++ H M   G  P  ++YN +       G+   A +    M+
Sbjct: 242 FTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMK 301

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
            N + PN  T   ++ G+   G +  A+     MK  G  PN+V++  +I    + M  D
Sbjct: 302 RNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFD 361

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
             + ++  M      P+ +T++T++      G + +   +F  M + G  P+   Y+ L 
Sbjct: 362 QAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELL 421

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G  RE   + A  +++ M+ +GF  ++V + T+I+  C       A+ +  +M   G+ 
Sbjct: 422 HGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQ 481

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           P+  TF  ++  Y +  +   A  +L  M A
Sbjct: 482 PDAFTFNAIIHAYCKEGKVSIAACLLGQMNA 512



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 167/366 (45%), Gaps = 7/366 (1%)

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
           +G+++       +M+  G+  T       I  +  AG  + ++K     S  G   P +R
Sbjct: 11  AGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRDPGVR 70

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
            YN L+ A   E  +     V   M  +G+ P+V TYN +  A  QN   D A +++ EM
Sbjct: 71  VYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEM 130

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRF-ARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
              G  P+  + G I+SG CK G+++EA  F A T+      P    +N ++        
Sbjct: 131 SRKGCHPDEVSHGTIVSGMCKLGRVEEARGFLAETV------PVQASYNAVVHALCGEFR 184

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
              V  V+  M +  + P+V+TY+TI++A+  A  +     I   M   G  P+   ++ 
Sbjct: 185 MWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTA 244

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L KG+  + +   A  +   M++ G+ P+ + +  +I G C  G +  A++ F+ M  + 
Sbjct: 245 LVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNA 304

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           + PN  T+ TL+ G+S A     A  I   MK+ G  P    +  + +      +  +A+
Sbjct: 305 LLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAE 364

Query: 514 RILSKI 519
            ++ K+
Sbjct: 365 SLIDKM 370



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 64/255 (25%), Positives = 122/255 (47%), Gaps = 1/255 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + + L++     G    A  I+N +   G KP++V YT ++  L  +  F+   S++ ++
Sbjct: 311 TYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKM 370

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +   P+++ FN +I    + G +  A++ F  M+ +G  P   TYN L+ G    G  
Sbjct: 371 LMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNH 430

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +++  ++  M   G  + +L TYN ++   C       A  ++ +M   G++PD  T+N 
Sbjct: 431 KDAFAMVIEMLNNG-FELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNA 489

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           I  AY + G+   A  ++ +M       N     I+IS  C +GK+  A+ +   M   G
Sbjct: 490 IIHAYCKEGKVSIAACLLGQMNAVNCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEG 549

Query: 314 VHPNLVIFNLLIKGF 328
           + PN   +N+L++  
Sbjct: 550 ICPNEATWNVLVRAI 564



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 1/188 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L+  L + G+   A  +F+ +   G  P+  TY  LL  L  +       +++ ++
Sbjct: 381 TFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEM 440

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             NG +   + +N VIN   +    + AM    +M   G+ P   T+N +I  Y   GK 
Sbjct: 441 LNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKV 500

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +  LL  M+   N   N+  Y +L+   CN+  ++ A   + KM   G+ P+  T+N 
Sbjct: 501 SIAACLLGQMNAV-NCPRNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNV 559

Query: 254 IATAYAQN 261
           +  A   N
Sbjct: 560 LVRAIFTN 567


>gi|357449261|ref|XP_003594907.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483955|gb|AES65158.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1385

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 197/418 (47%), Gaps = 17/418 (4%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G  PS+ T   +L +L   +  +   S   ++  N + P+   FN ++NA  E G  + A
Sbjct: 139 GFSPSVFTCNMVLGSLVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSA 198

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
                KM E+G  PT  TYNTL+  Y   G+ + + +L+D M+ +G +  ++ TYNVL+ 
Sbjct: 199 GVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELIDAMASKG-IAADVCTYNVLID 257

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C +    + + ++ +M  + + P+ +TYNT+     + G+   A +V  EM    + P
Sbjct: 258 DLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEGKIGVATKVFEEMSLCNLLP 317

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N  T   +I G+C  G I+EALR    M  +G+ PN V +  L+ G  +      V  VL
Sbjct: 318 NSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTYGALLNGISKHAQFGLVSSVL 377

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M+   V    I+Y+T+++     G +++  ++ DDM K  + PD   +S+L  G+++ 
Sbjct: 378 ERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLKVSVSPDIVTFSVLVNGFLK- 436

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
                          +G  PN V+ +T+I  +C  G++  A+  +  M + G   +  T 
Sbjct: 437 ---------------TGLVPNRVLHSTLIYNYCKMGNLKEALNAYAVMNQSGHVSDHFTS 481

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             L+  +    +   AE  +  M   G+ P   TF  + +    +G   +A  +  K+
Sbjct: 482 SVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIIDTYGNSGDALKAFSVFDKM 539



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 184/391 (47%), Gaps = 17/391 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N+L ERGK + A  +   + E GH P+ VTY TLL     + R+ +   ++ 
Sbjct: 179 VATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRYKAASELID 238

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+  D   +N +I+         +      +M+++ + P   TYNTLI G    G
Sbjct: 239 AMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITYNTLINGLVKEG 298

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K   + K+ + MS   N+ PN  TYN L+   C+  NI EA  +   M + G++P+ VTY
Sbjct: 299 KIGVATKVFEEMSL-CNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVSHGLRPNEVTY 357

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +    +++ +      V+  M  +GV+    +   +I G CK G ++EA++    M +
Sbjct: 358 GALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEEAVQLLDDMLK 417

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             V P++V F++L+ GF++                  + P+ + +ST++  +   G + +
Sbjct: 418 VSVSPDIVTFSVLVNGFLKT----------------GLVPNRVLHSTLIYNYCKMGNLKE 461

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
               +  M ++G   D    S+L   + R    E+AE  +  M   G  P+ V F  II 
Sbjct: 462 ALNAYAVMNQSGHVSDHFTSSVLVASFCRCGRLEEAEYFVDHMSRMGLAPSSVTFDCIID 521

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
            + + G   +A  VFDKM   G  P+  T+E
Sbjct: 522 TYGNSGDALKAFSVFDKMNSLGHLPSQFTYE 552



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 209/448 (46%), Gaps = 4/448 (0%)

Query: 79   MNSLIER-GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            M +L  R G    A A+ + ++     P   TYT+L+A L  + +      +  +  E G
Sbjct: 589  MLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIEKG 648

Query: 138  M-DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            +  P+   + ++++   + G+ + A+  F  M   G+ P    +N L+  Y   GK  + 
Sbjct: 649  LLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMSKV 708

Query: 197  VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
              +L  M R  ++  NL TYN+L+  +     +     + ++M   G  PD +T++++  
Sbjct: 709  NDILSTM-RSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLIL 767

Query: 257  AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
             Y ++G  D A + + ++   G + +  T  +++S  C+  +IK A    + +   GV P
Sbjct: 768  GYCKSGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTP 827

Query: 317  NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
            N+  +N L  GFV     D    +L  + E    P    ++T++      G +    E+ 
Sbjct: 828  NVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQ 887

Query: 377  DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            D+M   G+     A S + +G  R ++ ++A  +L  M+E    P V  FTT++  +C +
Sbjct: 888  DEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKE 947

Query: 437  GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            G++ +A+E+   M +  V  ++  +  L+ G         A ++ + M+   + P  S +
Sbjct: 948  GNVAKALELRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIY 1007

Query: 497  LLLAEARRATG-LTKEAKRILSKIKNKE 523
            ++L ++   TG    E++++L  ++ +E
Sbjct: 1008 IVLIDSFLCTGNYIVESEKLLRDLRTRE 1035



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 184/417 (44%), Gaps = 6/417 (1%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   +A ++F+ +   GH PS  TY  LL  L I    N     M +         S F+
Sbjct: 527 GDALKAFSVFDKMNSLGHLPSQFTYEGLLKGLLIGGHINEAKIFMHRPSSIPYAIGSTFY 586

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++   S SGN+  A+    +M  +   P + TY +LI G    GK   ++ L      
Sbjct: 587 NTMLTLTSRSGNLSNAVALLDEMVMNNFVPDSFTYTSLIAGLCRKGKMVPALLLSGRAIE 646

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +G + PN   Y  LV     E +   A  +   M   G++PD + +N +   Y++ G+  
Sbjct: 647 KGLLSPNPAMYTSLVDGLLKEGHSKAALYMFEDMLNEGVQPDAIAFNVLLDRYSRKGKMS 706

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +  +++  M    +  N  T  I++ GY K   +    +    M  +G  P+ + ++ LI
Sbjct: 707 KVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLI 766

Query: 326 KGFVEIMDRDGVDEVLALMKEFRV---NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            G+ +      +D  +  +++  V     D  T + +++       +    ++   +   
Sbjct: 767 LGYCK---SGSLDVAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNML 823

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G+ P+   Y+ L  G+VR    ++A  +L  ++E+G+ P    FTT+I G C  G++  A
Sbjct: 824 GVTPNVDTYNSLFNGFVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGA 883

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           +E+ D+M   GVS        ++ G + +R+   A  IL IM    + P  +TF  L
Sbjct: 884 MELQDEMKILGVSSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTL 940



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/308 (26%), Positives = 137/308 (44%)

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           N   +++L+R    E  + +A      M   G  P V T N +  +  ++ E D      
Sbjct: 108 NPAVFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFF 167

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            EM  N V PN  T  I+++  C+ GK K A    R M E G  P  V +N L+  + + 
Sbjct: 168 KEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKK 227

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
                  E++  M    +  DV TY+ +++         K   I   M K  + P+   Y
Sbjct: 228 GRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILRRMRKNMVYPNEITY 287

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + L  G V+E +   A ++   M      PN V + T+I G CS+G+++ A+ + D M  
Sbjct: 288 NTLINGLVKEGKIGVATKVFEEMSLCNLLPNSVTYNTLIFGHCSNGNIEEALRLCDVMVS 347

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
           HG+ PN  T+  L+ G S+  Q      +L+ M+  GV     ++  + +     GL +E
Sbjct: 348 HGLRPNEVTYGALLNGISKHAQFGLVSSVLERMRMDGVRVGHISYTTMIDGLCKNGLLEE 407

Query: 512 AKRILSKI 519
           A ++L  +
Sbjct: 408 AVQLLDDM 415



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 81/361 (22%), Positives = 156/361 (43%), Gaps = 36/361 (9%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L++    +GK  +   I + +       +L TY  LL   + +        + +++  +G
Sbjct: 695  LLDRYSRKGKMSKVNDILSTMRSRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHG 754

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              PD + ++++I  + +SG+++ A                                   V
Sbjct: 755  FAPDRLTWHSLILGYCKSGSLDVA-----------------------------------V 779

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            K L  ++ EG  K +  T NVLV   C    I  A++++ ++   G+ P+V TYN++   
Sbjct: 780  KFLRKITVEG-FKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNG 838

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            + +    D+A  ++  +  NG  P  +    +I G C+ G +K A+     MK  GV   
Sbjct: 839  FVRTCSFDEARCILHALLENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQ 898

Query: 318  LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             V  + +I+G       D    +L +M E ++ P V T++T+M+ +   G + K  E+  
Sbjct: 899  GVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALELRS 958

Query: 378  DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
             M +  +K D  AY++L  G   + + + A +L   M +    PN  I+  +I  +   G
Sbjct: 959  VMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTG 1018

Query: 438  S 438
            +
Sbjct: 1019 N 1019



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 60/303 (19%), Positives = 128/303 (42%), Gaps = 1/303 (0%)

Query: 65   NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
            ++  C  + +   L++   +R        ++N +I  G  P  +T+ +L+         +
Sbjct: 717  SRSLCFNLATYNILLHGYSKRHGMARCSKLYNEMIIHGFAPDRLTWHSLILGYCKSGSLD 776

Query: 125  SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
                 + ++   G   D    N +++   E   ++ A D   ++   G+TP   TYN+L 
Sbjct: 777  VAVKFLRKITVEGFKVDCFTLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLF 836

Query: 185  KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
             G+      +E+  +L  +   G   P  + +  L+R  C   N+  A  +  +M   G+
Sbjct: 837  NGFVRTCSFDEARCILHALLENG-YAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGV 895

Query: 245  KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
                V  + I    A++ + D+A  ++  M    + P   T   ++  YCKEG + +AL 
Sbjct: 896  SSQGVAMSAIIRGLARSRKTDEATRILGIMLEMQIIPTVATFTTLMHTYCKEGNVAKALE 955

Query: 305  FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
                M++  V  ++  +N+LI G     D     ++   M++  + P+   Y  +++++ 
Sbjct: 956  LRSVMEQCHVKLDVAAYNVLISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFL 1015

Query: 365  TAG 367
              G
Sbjct: 1016 CTG 1018



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 110/238 (46%), Gaps = 2/238 (0%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
            ++  L++ L ER + + A  +   L   G  P++ TY +L         F+    I+  +
Sbjct: 796  TLNVLVSKLCERNEIKMAFDLVKQLNMLGVTPNVDTYNSLFNGFVRTCSFDEARCILHAL 855

Query: 134  EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             ENG  P    F  +I      GN++ AM+   +MK  G++      + +I+G   + K 
Sbjct: 856  LENGYAPTCKQFTTLIRGMCRMGNVKGAMELQDEMKILGVSSQGVAMSAIIRGLARSRKT 915

Query: 194  EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            +E+ ++L +M  E  + P + T+  L+  +C E N+ +A  +   M    +K DV  YN 
Sbjct: 916  DEATRILGIM-LEMQIIPTVATFTTLMHTYCKEGNVAKALELRSVMEQCHVKLDVAAYNV 974

Query: 254  IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY-CKEGKIKEALRFARTMK 310
            + +    +G+   A ++  EME   + PN     ++I  + C    I E+ +  R ++
Sbjct: 975  LISGLCADGDIQAAFKLYEEMEQRDIWPNTSIYIVLIDSFLCTGNYIVESEKLLRDLR 1032



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 8/211 (3%)

Query: 305 FARTMKEYGV-HPNLVIFNLLIKGFV-EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           F   M+ Y   + N  +F+LLI+  + E M  D V E   LM     +P V T + ++ +
Sbjct: 95  FGALMETYPFCNSNPAVFDLLIRVCLRENMVGDAV-EAFRLMGFRGFSPSVFTCNMVLGS 153

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
                 +D     F +M    + P+   ++IL        + + A  LL  M E+G  P 
Sbjct: 154 LVKDREVDLFWSFFKEMIANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPT 213

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
            V + T+++ +C  G    A E+ D M   G++ ++ T+  L+       +  +   IL+
Sbjct: 214 AVTYNTLLNWYCKKGRYKAASELIDAMASKGIAADVCTYNVLIDDLCRKSRSAKGYLILR 273

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            M+   V+P + T+  L       GL KE K
Sbjct: 274 RMRKNMVYPNEITYNTLIN-----GLVKEGK 299



 Score = 42.0 bits (97), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 33/133 (24%), Positives = 53/133 (39%)

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            + +L +  +RE     A E    M   GF P+V     ++     D  +D     F +M
Sbjct: 111 VFDLLIRVCLRENMVGDAVEAFRLMGFRGFSPSVFTCNMVLGSLVKDREVDLFWSFFKEM 170

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
             + VSPN+ TF  L+    E  +   A  +L+ M   G  P   T+  L       G  
Sbjct: 171 IANRVSPNVATFNILLNALCERGKFKSAGVLLRKMDETGHFPTAVTYNTLLNWYCKKGRY 230

Query: 510 KEAKRILSKIKNK 522
           K A  ++  + +K
Sbjct: 231 KAASELIDAMASK 243


>gi|125600921|gb|EAZ40497.1| hypothetical protein OsJ_24952 [Oryza sativa Japonica Group]
          Length = 766

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 218/445 (48%), Gaps = 5/445 (1%)

Query: 80  NSLI----ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           N+LI     R   +EA  +F+ +   G +P  VT+ +LL      +R +    ++ ++E 
Sbjct: 229 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 288

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P  + +N++I+++ + G +E+A+    +M+  G+ P   TY TLI G   AGK + 
Sbjct: 289 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDA 348

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++   D M R G  KPNL TYN L++         E   V  +  ++G  PD+VT+NT+ 
Sbjct: 349 AIVEYDEMVRNG-CKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLL 407

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + QNG   +   V  EM+  G  P   T   +IS Y + G    A++  + M E G++
Sbjct: 408 AVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY 467

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++  +N ++         +  +++ A M+E    PD  +YS++++A++ A  +DK K +
Sbjct: 468 PDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKAL 527

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            DD+    I+P       L     +     +AE+  + + +     ++ +   ++S +  
Sbjct: 528 SDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGK 587

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +  + +  ++   M E  ++ +  T+ +LM  YS      + E IL  +K+ GV P + +
Sbjct: 588 NRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYS 647

Query: 496 FLLLAEARRATGLTKEAKRILSKIK 520
           +  +  A    G  KEA R+ S++K
Sbjct: 648 YNTVIYAYGRKGQMKEASRLFSEMK 672



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 203/407 (49%), Gaps = 16/407 (3%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R +   +  +   G+  EA A    L++    P    YT L++A +   RF    ++  +
Sbjct: 124 RVLATAIRVMARAGRLAEASA----LLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRR 179

Query: 133 VEENGMDPDSIFFNAVINAFSESG-NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           + ++G+ P  + +N V++ +S+     +E ++    MKE G+ P   TYNTLI       
Sbjct: 180 MVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRA 239

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+ ++ D M   G  +P+  T+N L+  +   +   EA  V+ +M   G  P VVTY
Sbjct: 240 LYKEAAQVFDEMKASG-FEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTY 298

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N++ ++Y ++G  +QA  +  EME  G++P+  T   +ISG  + GKI  A+     M  
Sbjct: 299 NSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVR 358

Query: 312 YGVHPNLVIFNLLIK--GFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTA 366
            G  PNL  +N LIK  G      R    E++A+  EFR     PD++T++T++  +   
Sbjct: 359 NGCKPNLCTYNALIKMHGV-----RGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQN 413

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G   +   +F +M KAG  P+   Y  L   Y R    + A ++   M+E+G +P+V  +
Sbjct: 414 GLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTY 473

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
             ++S     G  ++A ++F +M E    P+  ++ +L+  Y+ A++
Sbjct: 474 NAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKR 520



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 232/488 (47%), Gaps = 45/488 (9%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIMSQ 132
           + T L+++    G+ ++A A+F  +++ G +P++VTY  +L   + +   +  +  +++ 
Sbjct: 156 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 215

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           ++E+G+ PD   +N +I+        +EA   F +MK SG  P   T+N+L+  YG A +
Sbjct: 216 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 275

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +E+++++  M R G   P++ TYN L+ ++  +  + +A  +  +M   GMKPDVVTY 
Sbjct: 276 HDEAIEVIQEMERVG-CPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYT 334

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+ +   + G+ D A     EM  NG +PN  T   +I  +   GK  E +      +  
Sbjct: 335 TLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSA 394

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
           G  P++V +N L+  F     ++G+D EV  + KE +     P+  TY ++++++S  G 
Sbjct: 395 GFVPDIVTWNTLLAVF----GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 450

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            D   +I+  M +AGI PD   Y+ +     R    E+AE+L   M E    P+   +++
Sbjct: 451 FDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSS 510

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSP-------------------------------- 456
           ++  + +   +D+   + D +    + P                                
Sbjct: 511 LLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKR 570

Query: 457 ---NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
              ++     ++  Y + R   + E+IL +MK   ++   +T+  L       G  ++ +
Sbjct: 571 CSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCE 630

Query: 514 RILSKIKN 521
            IL++IK+
Sbjct: 631 NILTEIKS 638



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 205/433 (47%), Gaps = 36/433 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   L++S ++ G  ++A A+   +   G KP +VTYTTL++ L    + ++     
Sbjct: 294 SVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEY 353

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  NG  P+   +NA+I      G   E M  F + + +G  P   T+NTL+  +G  
Sbjct: 354 DEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQN 413

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E   +   M + G + P   TY  L+ ++        A  +  +M  +G+ PDV T
Sbjct: 414 GLDSEVSGVFKEMKKAGYI-PERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 472

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN + +A A+ G  +QAE++  EME    +P+  +   ++  Y    ++ +    +  + 
Sbjct: 473 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY 532

Query: 311 EYGVHPN------LVIFNLLI-------KGFVEIMDR----------------------D 335
              + P+      LV+ N  +       K F+E+  +                       
Sbjct: 533 SERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVR 592

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
            V+++L+LMKE  +N    TY+++M+ +S  G  +KC+ I  ++  +G++PD ++Y+ + 
Sbjct: 593 KVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVI 652

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
             Y R+ + ++A  L   M  SG  P+VV +   +  + S+   + AIE+   M   G  
Sbjct: 653 YAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCK 712

Query: 456 PNLKTFETLMWGY 468
           PN +T+ +++ GY
Sbjct: 713 PNERTYNSIVEGY 725



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 181/367 (49%), Gaps = 5/367 (1%)

Query: 80  NSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           N+LI+    RGK  E  A+F+     G  P +VT+ TLLA        + +  +  ++++
Sbjct: 369 NALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKK 428

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P+   + ++I+++S  G  + AM  + +M E+G+ P  STYN ++      G+ E+
Sbjct: 429 AGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQ 488

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + KL   M  E + KP+  +Y+ L+ A+ N K + +   +   + +  ++P      T+ 
Sbjct: 489 AEKLFAEME-ERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLV 547

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              ++     +AE+  +E+       +      ++S Y K   +++  +    MKE  ++
Sbjct: 548 LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAIN 607

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            +   +N L+  +  + D +  + +L  +K   V PD  +Y+T++ A+   G M +   +
Sbjct: 608 LSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRL 667

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F +M  +G+KPD   Y+I  K YV     E+A EL+  M+  G  PN   + +I+ G+C 
Sbjct: 668 FSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 727

Query: 436 DGSMDRA 442
           +G +  A
Sbjct: 728 NGKLTDA 734



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 194/388 (50%), Gaps = 30/388 (7%)

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           I   + +G + EA      + ++   P    Y  L+  +  AG+  ++V +   M   G 
Sbjct: 130 IRVMARAGRLAEAS----ALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSG- 184

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS----GMKPDVVTYNTIATAYAQNGEA 264
           V+P + TYNV++  +     +   W  + ++ AS    G+ PD  TYNT+ +   +    
Sbjct: 185 VQPAIVTYNVVLHVY---SKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALY 241

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A +V  EM+ +G +P+  T   ++  Y K  +  EA+   + M+  G  P++V +N L
Sbjct: 242 KEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSL 301

Query: 325 IKGFVEIMDRDGV-DEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           I  +V    +DG+ ++ +AL +E  V    PDV+TY+T+++    AG +D     +D+M 
Sbjct: 302 ISSYV----KDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMV 357

Query: 381 KAGIKPDAHAYSILAKGY-VREQEPEKAEELLMTMIE----SGFHPNVVIFTTIISGWCS 435
           + G KP+   Y+ L K + VR + PE     +M + +    +GF P++V + T+++ +  
Sbjct: 358 RNGCKPNLCTYNALIKMHGVRGKFPE-----MMAVFDEFRSAGFVPDIVTWNTLLAVFGQ 412

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G       VF +M + G  P   T+ +L+  YS       A +I + M   G++P  ST
Sbjct: 413 NGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 472

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKE 523
           +  +  A    G  ++A+++ ++++ ++
Sbjct: 473 YNAVLSALARGGRWEQAEKLFAEMEERD 500



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 154/339 (45%), Gaps = 6/339 (1%)

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           T I+    AG+  E+  LLD         P+   Y  LV A+       +A  V  +M  
Sbjct: 128 TAIRVMARAGRLAEASALLD-----AAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVD 182

Query: 242 SGMKPDVVTYNTIATAYAQNGEA-DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
           SG++P +VTYN +   Y++      +  E++  M+ +GV P+  T   +IS   +    K
Sbjct: 183 SGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYK 242

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           EA +    MK  G  P+ V FN L+  + +    D   EV+  M+     P V+TY++++
Sbjct: 243 EAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLI 302

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           +++   G +++   +  +M   G+KPD   Y+ L  G  R  + + A      M+ +G  
Sbjct: 303 SSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCK 362

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN+  +  +I      G     + VFD+    G  P++ T+ TL+  + +         +
Sbjct: 363 PNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGV 422

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + MK  G  P++ T++ L  +    GL   A +I  ++
Sbjct: 423 FKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRM 461



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 38/280 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++++L   G+ ++A+ +F  + E   KP   +Y++LL A    KR + + ++  
Sbjct: 470 VSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSD 529

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK------------------------ 167
            +    ++P +     ++   S+  N+ EA   F +                        
Sbjct: 530 DIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNR 589

Query: 168 -----------MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
                      MKES +  + +TYN+L+  Y   G  E+   +L  +   G V+P+  +Y
Sbjct: 590 MVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSG-VRPDRYSY 648

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N ++ A+  +  + EA  +  +M  SG+KPDVVTYN    +Y  N   ++A E++  M  
Sbjct: 649 NTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVT 708

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            G +PN RT   I+ GYC+ GK+ +A  F   + +  +HP
Sbjct: 709 QGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ--LHP 746


>gi|46091161|dbj|BAD13709.1| PPR protein [Oryza sativa Indica Group]
          Length = 332

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 92/325 (28%), Positives = 177/325 (54%), Gaps = 7/325 (2%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD + ++ VIN F + G++++   T+ +M +  ++P   TYN++I     A   ++++++
Sbjct: 10  PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           L  M + G V P+  TYN +V  +C+     EA   + KM + G++PDVVTYN++     
Sbjct: 70  LTTMVKSG-VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLC 128

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +NG   +A ++   M   G++P+  T G ++ GY  +G + E       M   G+HPN  
Sbjct: 129 KNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHY 188

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +F++L+  + +   ++ V+E + +  + R   +NP+ +TY T+++    +G ++     F
Sbjct: 189 VFSILVCAYAK---QEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYF 245

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           + M   G++PD+  Y+ L        + EKAEEL + M++ G   + + F +II   C +
Sbjct: 246 EQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKE 305

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTF 461
           G +  ++++FD M   GV P++ T 
Sbjct: 306 GRVIESVKLFDLMVRIGVKPDIITL 330



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 80/317 (25%), Positives = 174/317 (54%), Gaps = 3/317 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + ++N   + G   +  + +N +++    P++VTY +++AAL   +  +    +++
Sbjct: 12  VVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEVLT 71

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + ++G+ PD + +N++++ F  SG  +EA+    KM+  G+ P   TYN+L+      G
Sbjct: 72  TMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNG 131

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G +KP++ TY  L++ +  +  + E   ++  M  +G+ P+   +
Sbjct: 132 RCTEARKIFDSMTKRG-LKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVF 190

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  AYA+  + ++A  V  +M   G+ PN  T G +I   CK G++++A+ +   M +
Sbjct: 191 SILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMID 250

Query: 312 YGVHPNLVIFNLLIKGFVEIMDR-DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            G+ P+ +++N LI     I D+ +  +E+   M +  +    I +++I+++    G + 
Sbjct: 251 EGLRPDSIVYNSLIHSLC-IFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVI 309

Query: 371 KCKEIFDDMGKAGIKPD 387
           +  ++FD M + G+KPD
Sbjct: 310 ESVKLFDLMVRIGVKPD 326



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 76/283 (26%), Positives = 151/283 (53%)

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G+  P++ +Y+ ++  +  E ++ + ++  ++M    + P+VVTYN+I  A  +    D+
Sbjct: 6   GDCPPDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDK 65

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A EV+  M  +GV P+  T   I+ G+C  G+ KEA+ F + M+  GV P++V +N L+ 
Sbjct: 66  AMEVLTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMD 125

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
              +        ++   M +  + PD+ TY T++  ++T G + +   + D M + GI P
Sbjct: 126 YLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHP 185

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           + + +SIL   Y ++++ E+A  +   M + G +PN V + T+I   C  G ++ A+  F
Sbjct: 186 NHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYF 245

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           ++M + G+ P+   + +L+       +  +AEE+   M   G+
Sbjct: 246 EQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRGI 288



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 107/207 (51%)

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++V ++ +I GF +  D D        M + R++P+V+TY++I+ A   A  +DK  E+
Sbjct: 10  PDVVSYSTVINGFFKEGDLDKTYSTYNEMLDKRISPNVVTYNSIIAALCKAQTVDKAMEV 69

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
              M K+G+ PD   Y+ +  G+    +P++A   L  M   G  P+VV + +++   C 
Sbjct: 70  LTTMVKSGVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCK 129

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G    A ++FD M + G+ P++ T+ TL+ GY+          +L +M   G+HP    
Sbjct: 130 NGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYV 189

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNK 522
           F +L  A       +EA  + SK++ +
Sbjct: 190 FSILVCAYAKQEKVEEAMLVFSKMRQQ 216



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/248 (26%), Positives = 120/248 (48%), Gaps = 36/248 (14%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   LM+ L + G+  EA+ IF+++ + G KP + TY TLL     +     +H ++ 
Sbjct: 117 VVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLD 176

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +  NG+ P+   F+ ++ A+++   +EEAM  F KM++ GL P   TY T+I     +G
Sbjct: 177 LMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSG 236

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E+++   + M  EG ++P+   YN L+ + C    I + W                  
Sbjct: 237 RVEDAMLYFEQMIDEG-LRPDSIVYNSLIHSLC----IFDKW------------------ 273

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
                        ++AEE+ +EM   G+  +      II  +CKEG++ E+++    M  
Sbjct: 274 -------------EKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESVKLFDLMVR 320

Query: 312 YGVHPNLV 319
            GV P+++
Sbjct: 321 IGVKPDII 328


>gi|9758456|dbj|BAB08985.1| membrane-associated salt-inducible protein-like [Arabidopsis
           thaliana]
          Length = 949

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 129/477 (27%), Positives = 220/477 (46%), Gaps = 39/477 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT------------ 118
           T R  T L+++        EA +    + E G + SLVTY+ ++   +            
Sbjct: 343 TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF 402

Query: 119 -----IQKRFN-SIH-----------------SIMSQVEENGMDPDSIFFNAVINAFSES 155
                I K  N SI+                 +++ ++EE G+D     ++ +++ ++  
Sbjct: 403 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMV 462

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
            + ++ +  F ++KE G TPT  TY  LI  Y   GK  +++++  +M  EG VK NL+T
Sbjct: 463 ADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG-VKHNLKT 521

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           Y++++  +   K+   A+ V   M   GMKPDV+ YN I +A+   G  D+A + + EM+
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
               +P  RT   II GY K G ++ +L     M+  G  P +  FN LI G VE   R 
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVE--KRQ 639

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
            V E+L  M    V+ +  TY+ IM  +++ G   K  E F  +   G+  D   Y  L 
Sbjct: 640 AV-EILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 698

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
           K   +    + A  +   M       N  ++  +I GW   G +  A ++  +M + GV 
Sbjct: 699 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 758

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           P++ T+ + +   S+A    RA + ++ M+A GV P   T+  L +      L ++A
Sbjct: 759 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKA 815



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 226/526 (42%), Gaps = 105/526 (19%)

Query: 85  RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
           RG    A+  F  +   G  P+   YT+L+ A  + +  +   S + +++E G++   + 
Sbjct: 322 RGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVT 381

Query: 145 FNAVINAFSESG-----------------------------------NMEEAMDTFWKMK 169
           ++ ++  FS++G                                   NME A     +M+
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME 441

Query: 170 ESGLTPTTSTYNTLIKGYGI-----------------------------------AGKPE 194
           E G+    + Y+T++ GY +                                    GK  
Sbjct: 442 EEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKIS 501

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           +++++  +M  EG VK NL+TY++++  +   K+   A+ V   M   GMKPDV+ YN I
Sbjct: 502 KALEVSRVMKEEG-VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 560

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
            +A+   G  D+A + + EM+    +P  RT   II GY K G ++ +L     M+  G 
Sbjct: 561 ISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620

Query: 315 HPNLVIFNLLIKGF------VEIMDR---DGVD-----------------------EVLA 342
            P +  FN LI G       VEI+D     GV                        E   
Sbjct: 621 VPTVHTFNGLINGLVEKRQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFT 680

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            ++   ++ D+ TY  ++ A   +G M     +  +M    I  ++  Y+IL  G+ R  
Sbjct: 681 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 740

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           +  +A +L+  M + G  P++  +T+ IS     G M+RA +  ++M   GV PN+KT+ 
Sbjct: 741 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYT 800

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF--LLLAEARRAT 506
           TL+ G++ A  P +A    + MKA G+ P K+ +  LL +   RA+
Sbjct: 801 TLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 846



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 198/396 (50%), Gaps = 10/396 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+N   + GK  +A  +   + E G K +L TY+ ++      K + +  ++ 
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + + GM PD I +N +I+AF   GNM+ A+ T  +M++    PTT T+  +I GY  +
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    S+++ D+M R G V P + T+N L+     ++   E   ++ +M  +G+  +  T
Sbjct: 603 GDMRRSLEVFDMMRRCGCV-PTVHTFNGLINGLVEKRQAVE---ILDEMTLAGVSANEHT 658

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  I   YA  G+  +A E    +++ G+  +  T   ++   CK G+++ AL   + M 
Sbjct: 659 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 718

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              +  N  ++N+LI G+    D     +++  MK+  V PD+ TY++ ++A S AG M+
Sbjct: 719 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 778

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  +  ++M   G+KP+   Y+ L KG+ R   PEKA      M   G  P+  ++  ++
Sbjct: 779 RATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 838

Query: 431 SGWCSDGSMDRA------IEVFDKMCEHGVSPNLKT 460
           +   S  S+  A      + +  +M E G+  ++ T
Sbjct: 839 TSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGT 874



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 188/409 (45%), Gaps = 4/409 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           KPS   +  ++     +   +       ++   G+ P S  + ++I+A++   +M+EA+ 
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              KMKE G+  +  TY+ ++ G+  AG  E +    D   R      N   Y  ++ A 
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT-LNASIYGKIIYAH 424

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C   N+  A  ++ +M   G+   +  Y+T+   Y    +  +   V   ++  G  P  
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T G +I+ Y K GKI +AL  +R MKE GV  NL  ++++I GFV++ D      V   
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M +  + PDVI Y+ I++A+   G MD+  +   +M K   +P    +  +  GY +  +
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
             ++ E+   M   G  P V  F  +I+G        +A+E+ D+M   GVS N  T+  
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEK---RQAVEILDEMTLAGVSANEHTYTK 661

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           +M GY+      +A E    ++  G+     T+  L +A   +G  + A
Sbjct: 662 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 710


>gi|115473111|ref|NP_001060154.1| Os07g0590600 [Oryza sativa Japonica Group]
 gi|34393454|dbj|BAC82993.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113611690|dbj|BAF22068.1| Os07g0590600 [Oryza sativa Japonica Group]
          Length = 784

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 218/445 (48%), Gaps = 5/445 (1%)

Query: 80  NSLI----ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           N+LI     R   +EA  +F+ +   G +P  VT+ +LL      +R +    ++ ++E 
Sbjct: 247 NTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMER 306

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P  + +N++I+++ + G +E+A+    +M+  G+ P   TY TLI G   AGK + 
Sbjct: 307 VGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDA 366

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++   D M R G  KPNL TYN L++         E   V  +  ++G  PD+VT+NT+ 
Sbjct: 367 AIVEYDEMVRNG-CKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLL 425

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + QNG   +   V  EM+  G  P   T   +IS Y + G    A++  + M E G++
Sbjct: 426 AVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIY 485

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++  +N ++         +  +++ A M+E    PD  +YS++++A++ A  +DK K +
Sbjct: 486 PDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKAL 545

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            DD+    I+P       L     +     +AE+  + + +     ++ +   ++S +  
Sbjct: 546 SDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGK 605

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +  + +  ++   M E  ++ +  T+ +LM  YS      + E IL  +K+ GV P + +
Sbjct: 606 NRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYS 665

Query: 496 FLLLAEARRATGLTKEAKRILSKIK 520
           +  +  A    G  KEA R+ S++K
Sbjct: 666 YNTVIYAYGRKGQMKEASRLFSEMK 690



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 118/488 (24%), Positives = 232/488 (47%), Gaps = 45/488 (9%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIMSQ 132
           + T L+++    G+ ++A A+F  +++ G +P++VTY  +L   + +   +  +  +++ 
Sbjct: 174 AYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVELVAS 233

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           ++E+G+ PD   +N +I+        +EA   F +MK SG  P   T+N+L+  YG A +
Sbjct: 234 MKEHGVAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARR 293

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +E+++++  M R G   P++ TYN L+ ++  +  + +A  +  +M   GMKPDVVTY 
Sbjct: 294 HDEAIEVIQEMERVG-CPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYT 352

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+ +   + G+ D A     EM  NG +PN  T   +I  +   GK  E +      +  
Sbjct: 353 TLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSA 412

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
           G  P++V +N L+  F     ++G+D EV  + KE +     P+  TY ++++++S  G 
Sbjct: 413 GFVPDIVTWNTLLAVF----GQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 468

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            D   +I+  M +AGI PD   Y+ +     R    E+AE+L   M E    P+   +++
Sbjct: 469 FDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSS 528

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSP-------------------------------- 456
           ++  + +   +D+   + D +    + P                                
Sbjct: 529 LLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKR 588

Query: 457 ---NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
              ++     ++  Y + R   + E+IL +MK   ++   +T+  L       G  ++ +
Sbjct: 589 CSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCE 648

Query: 514 RILSKIKN 521
            IL++IK+
Sbjct: 649 NILTEIKS 656



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 205/433 (47%), Gaps = 36/433 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   L++S ++ G  ++A A+   +   G KP +VTYTTL++ L    + ++     
Sbjct: 312 SVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEY 371

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  NG  P+   +NA+I      G   E M  F + + +G  P   T+NTL+  +G  
Sbjct: 372 DEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQN 431

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E   +   M + G + P   TY  L+ ++        A  +  +M  +G+ PDV T
Sbjct: 432 GLDSEVSGVFKEMKKAGYI-PERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 490

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN + +A A+ G  +QAE++  EME    +P+  +   ++  Y    ++ +    +  + 
Sbjct: 491 YNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIY 550

Query: 311 EYGVHPN------LVIFNLLI-------KGFVEIMDR----------------------D 335
              + P+      LV+ N  +       K F+E+  +                       
Sbjct: 551 SERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVR 610

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
            V+++L+LMKE  +N    TY+++M+ +S  G  +KC+ I  ++  +G++PD ++Y+ + 
Sbjct: 611 KVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVI 670

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
             Y R+ + ++A  L   M  SG  P+VV +   +  + S+   + AIE+   M   G  
Sbjct: 671 YAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCK 730

Query: 456 PNLKTFETLMWGY 468
           PN +T+ +++ GY
Sbjct: 731 PNERTYNSIVEGY 743



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 183/370 (49%), Gaps = 37/370 (10%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP-EESVK 198
           PD+  + A+++AFS +G   +A+  F +M +SG+ P   TYN ++  Y     P +E V+
Sbjct: 170 PDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSGVQPAIVTYNVVLHVYSKMAVPWKEVVE 229

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           L+  M   G V P+  TYN L+          EA  V  +M ASG +PD VT+N++   Y
Sbjct: 230 LVASMKEHG-VAPDRYTYNTLISCCRRRALYKEAAQVFDEMKASGFEPDKVTFNSLLDVY 288

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
            +    D+A EVI EME  G  P+  T   +IS Y K+G +++A+   + M+  G+ P++
Sbjct: 289 GKARRHDEAIEVIQEMERVGCPPSVVTYNSLISSYVKDGLLEQAVALKQEMEVKGMKPDV 348

Query: 319 VIFNLLIKGF----------VEI--MDRDGVD--------------------EVLALMKE 346
           V +  LI G           VE   M R+G                      E++A+  E
Sbjct: 349 VTYTTLISGLDRAGKIDAAIVEYDEMVRNGCKPNLCTYNALIKMHGVRGKFPEMMAVFDE 408

Query: 347 FR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           FR     PD++T++T++  +   G   +   +F +M KAG  P+   Y  L   Y R   
Sbjct: 409 FRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGL 468

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            + A ++   M+E+G +P+V  +  ++S     G  ++A ++F +M E    P+  ++ +
Sbjct: 469 FDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSS 528

Query: 464 LMWGYSEARQ 473
           L+  Y+ A++
Sbjct: 529 LLHAYANAKR 538



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 181/367 (49%), Gaps = 5/367 (1%)

Query: 80  NSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           N+LI+    RGK  E  A+F+     G  P +VT+ TLLA        + +  +  ++++
Sbjct: 387 NALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGVFKEMKK 446

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P+   + ++I+++S  G  + AM  + +M E+G+ P  STYN ++      G+ E+
Sbjct: 447 AGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVSTYNAVLSALARGGRWEQ 506

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + KL   M  E + KP+  +Y+ L+ A+ N K + +   +   + +  ++P      T+ 
Sbjct: 507 AEKLFAEME-ERDCKPDEYSYSSLLHAYANAKRLDKMKALSDDIYSERIEPHNWLVKTLV 565

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              ++     +AE+  +E+       +      ++S Y K   +++  +    MKE  ++
Sbjct: 566 LVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNRMVRKVEKILSLMKESAIN 625

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            +   +N L+  +  + D +  + +L  +K   V PD  +Y+T++ A+   G M +   +
Sbjct: 626 LSAATYNSLMHMYSRLGDCEKCENILTEIKSSGVRPDRYSYNTVIYAYGRKGQMKEASRL 685

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F +M  +G+KPD   Y+I  K YV     E+A EL+  M+  G  PN   + +I+ G+C 
Sbjct: 686 FSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVTQGCKPNERTYNSIVEGYCR 745

Query: 436 DGSMDRA 442
           +G +  A
Sbjct: 746 NGKLTDA 752



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 194/388 (50%), Gaps = 30/388 (7%)

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           I   + +G + EA      + ++   P    Y  L+  +  AG+  ++V +   M   G 
Sbjct: 148 IRVMARAGRLAEAS----ALLDAAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVDSG- 202

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS----GMKPDVVTYNTIATAYAQNGEA 264
           V+P + TYNV++  +     +   W  + ++ AS    G+ PD  TYNT+ +   +    
Sbjct: 203 VQPAIVTYNVVLHVY---SKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALY 259

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A +V  EM+ +G +P+  T   ++  Y K  +  EA+   + M+  G  P++V +N L
Sbjct: 260 KEAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSL 319

Query: 325 IKGFVEIMDRDGV-DEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           I  +V    +DG+ ++ +AL +E  V    PDV+TY+T+++    AG +D     +D+M 
Sbjct: 320 ISSYV----KDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMV 375

Query: 381 KAGIKPDAHAYSILAKGY-VREQEPEKAEELLMTMIE----SGFHPNVVIFTTIISGWCS 435
           + G KP+   Y+ L K + VR + PE     +M + +    +GF P++V + T+++ +  
Sbjct: 376 RNGCKPNLCTYNALIKMHGVRGKFPE-----MMAVFDEFRSAGFVPDIVTWNTLLAVFGQ 430

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G       VF +M + G  P   T+ +L+  YS       A +I + M   G++P  ST
Sbjct: 431 NGLDSEVSGVFKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRMMEAGIYPDVST 490

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNKE 523
           +  +  A    G  ++A+++ ++++ ++
Sbjct: 491 YNAVLSALARGGRWEQAEKLFAEMEERD 518



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/339 (25%), Positives = 154/339 (45%), Gaps = 6/339 (1%)

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           T I+    AG+  E+  LLD         P+   Y  LV A+       +A  V  +M  
Sbjct: 146 TAIRVMARAGRLAEASALLD-----AAPGPDAGAYTALVSAFSRAGRFRDAVAVFRRMVD 200

Query: 242 SGMKPDVVTYNTIATAYAQNGEA-DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
           SG++P +VTYN +   Y++      +  E++  M+ +GV P+  T   +IS   +    K
Sbjct: 201 SGVQPAIVTYNVVLHVYSKMAVPWKEVVELVASMKEHGVAPDRYTYNTLISCCRRRALYK 260

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           EA +    MK  G  P+ V FN L+  + +    D   EV+  M+     P V+TY++++
Sbjct: 261 EAAQVFDEMKASGFEPDKVTFNSLLDVYGKARRHDEAIEVIQEMERVGCPPSVVTYNSLI 320

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           +++   G +++   +  +M   G+KPD   Y+ L  G  R  + + A      M+ +G  
Sbjct: 321 SSYVKDGLLEQAVALKQEMEVKGMKPDVVTYTTLISGLDRAGKIDAAIVEYDEMVRNGCK 380

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN+  +  +I      G     + VFD+    G  P++ T+ TL+  + +         +
Sbjct: 381 PNLCTYNALIKMHGVRGKFPEMMAVFDEFRSAGFVPDIVTWNTLLAVFGQNGLDSEVSGV 440

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            + MK  G  P++ T++ L  +    GL   A +I  ++
Sbjct: 441 FKEMKKAGYIPERDTYVSLISSYSRCGLFDLAMQIYKRM 479



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 130/280 (46%), Gaps = 38/280 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++++L   G+ ++A+ +F  + E   KP   +Y++LL A    KR + + ++  
Sbjct: 488 VSTYNAVLSALARGGRWEQAEKLFAEMEERDCKPDEYSYSSLLHAYANAKRLDKMKALSD 547

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK------------------------ 167
            +    ++P +     ++   S+  N+ EA   F +                        
Sbjct: 548 DIYSERIEPHNWLVKTLVLVNSKVNNLAEAEKAFLELRQKRCSLDINVLNAMVSIYGKNR 607

Query: 168 -----------MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
                      MKES +  + +TYN+L+  Y   G  E+   +L  +   G V+P+  +Y
Sbjct: 608 MVRKVEKILSLMKESAINLSAATYNSLMHMYSRLGDCEKCENILTEIKSSG-VRPDRYSY 666

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N ++ A+  +  + EA  +  +M  SG+KPDVVTYN    +Y  N   ++A E++  M  
Sbjct: 667 NTVIYAYGRKGQMKEASRLFSEMKCSGLKPDVVTYNIFVKSYVSNSMFEEAIELVRYMVT 726

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            G +PN RT   I+ GYC+ GK+ +A  F   + +  +HP
Sbjct: 727 QGCKPNERTYNSIVEGYCRNGKLTDAKIFVSNLPQ--LHP 764


>gi|297727717|ref|NP_001176222.1| Os10g0495400 [Oryza sativa Japonica Group]
 gi|255679525|dbj|BAH94950.1| Os10g0495400, partial [Oryza sativa Japonica Group]
          Length = 438

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 185/371 (49%), Gaps = 6/371 (1%)

Query: 83  IERGKPQEAQAIFNNLIEGGHK---PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           + R  P  A ++FN +   G     P L TY+ L+       R +   + +  V + G  
Sbjct: 68  VARDSPAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFR 127

Query: 140 PDSIFFNAVINAFSESGNMEEAMD-TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            ++I F  ++          +AMD    +M E    P   +   L+KG     + +E+++
Sbjct: 128 VEAITFAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALE 187

Query: 199 LLDLMS--REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           LL +M+  R G   P++ +Y  ++  +  E +  +A++  H+M    + P+VVTY++I  
Sbjct: 188 LLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIA 247

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A  +    D+A EV+  M  NGV P+  T   I+ GYC  G+ KEA+   + M+  GV P
Sbjct: 248 ALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEP 307

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N+V +  L+    +        ++   M +  + PD+ TY T++  ++T G + +   + 
Sbjct: 308 NVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALL 367

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           D M + GI+PD H ++IL   Y ++++ ++A  +   M + G +PNVV + T+I   C  
Sbjct: 368 DLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKS 427

Query: 437 GSMDRAIEVFD 447
           GS+D A+  F+
Sbjct: 428 GSVDDAMLYFE 438



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 160/334 (47%), Gaps = 6/334 (1%)

Query: 193 PEESVKLLDLMSREG--NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           P  +V L + M+R G   V P+L TY++L+   C    +   +  +  +   G + + +T
Sbjct: 73  PAAAVSLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAIT 132

Query: 251 YNTIATAYAQNGEADQAEEVIVE-MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           +  +      +     A ++++  M      P+  +C I++ G C E + +EAL     M
Sbjct: 133 FAPLLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMM 192

Query: 310 KE---YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
            +    G  P++V +  +I GF +  D D        M + R++P+V+TYS+I+ A   A
Sbjct: 193 ADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKA 252

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             MDK  E+ + M K G+ PD   Y+ +  GY    +P++A   L  M   G  PNVV +
Sbjct: 253 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 312

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            ++++  C +G    A ++FD M + G+ P++ T+ TL+ GY+          +L +M  
Sbjct: 313 RSLMNYLCKNGRCTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHALLDLMVR 372

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
            G+ P    F +L  A        +A  + SK++
Sbjct: 373 NGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMR 406



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 131/234 (55%), Gaps = 1/234 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T ++N   + G   +A + ++ +++    P++VTY++++AAL   +  +    +++
Sbjct: 204 VVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLN 263

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + +NG+ PD + +N++++ +  SG  +EA+ T  KM+  G+ P   TY +L+      G
Sbjct: 264 TMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNG 323

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+ K+ D M++ G ++P++ TY  L++ +  +  + E   ++  M  +G++PD   +
Sbjct: 324 RCTEARKIFDSMTKRG-LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVF 382

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           N +  AYA+  + DQA  V  +M  +G+ PN    G +I   CK G + +A+ +
Sbjct: 383 NILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLY 436



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 84/379 (22%), Positives = 160/379 (42%), Gaps = 73/379 (19%)

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
           S+ + M++   + + PD   ++ +I     +G ++        + + G      T+  L+
Sbjct: 78  SLFNRMARAGADEVTPDLCTYSILIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLL 137

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA---A 241
           KG     +  +++ ++     E +  P++ +  +L++  C+E    EA  ++H MA    
Sbjct: 138 KGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRG 197

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G  PDVV+Y T+                                   I+G+ KEG   +
Sbjct: 198 GGSPPDVVSYTTV-----------------------------------INGFFKEGDSDK 222

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A      M +  + PN+V ++ +I    +    D   EVL  M +  V PD +TY++I++
Sbjct: 223 AYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 282

Query: 362 AWSTAG--------------------------FMD------KCKE---IFDDMGKAGIKP 386
            + ++G                           M+      +C E   IFD M K G++P
Sbjct: 283 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKRGLEP 342

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   Y  L +GY  +    +   LL  M+ +G  P+  +F  +I  +     +D+A+ VF
Sbjct: 343 DIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVF 402

Query: 447 DKMCEHGVSPNLKTFETLM 465
            KM +HG++PN+  + T++
Sbjct: 403 SKMRQHGLNPNVVCYGTVI 421



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 137/299 (45%), Gaps = 10/299 (3%)

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG---VQPNGRTCGI 288
           A +V+ ++   G    + ++N   T  A++  A  A  +   M   G   V P+  T  I
Sbjct: 42  ARHVLDELPLRGWGASIYSFNRTLTDVARDSPA-AAVSLFNRMARAGADEVTPDLCTYSI 100

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV-EIMDRDGVDEVLALMKEF 347
           +I   C+ G++         + + G     + F  L+KG   +    D +D VL  M E 
Sbjct: 101 LIGCCCRAGRLDLGFAALGNVIKKGFRVEAITFAPLLKGLCADKRTSDAMDIVLRRMTEL 160

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIF----DDMGKAGIKPDAHAYSILAKGYVREQE 403
              PDV + + ++          +  E+     DD G  G  PD  +Y+ +  G+ +E +
Sbjct: 161 SCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRG-GGSPPDVVSYTTVINGFFKEGD 219

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            +KA      M++    PNVV +++II+  C   +MD+A+EV + M ++GV P+  T+ +
Sbjct: 220 SDKAYSTYHEMLDRRISPNVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNS 279

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           ++ GY  + QP  A   L+ M++ GV P   T+  L       G   EA++I   +  +
Sbjct: 280 ILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYRSLMNYLCKNGRCTEARKIFDSMTKR 338


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 217/480 (45%), Gaps = 36/480 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+  L   G  ++A  +++ +++ G  P+ V Y TLL  L     F+   ++ 
Sbjct: 276 TVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLW 335

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +   G++     FN +IN   + G M+ A +TF +M+E G  P   TY TL  GY   
Sbjct: 336 DDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKV 395

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  EE+ K+ + M +E    P++  YN L+      K I++  +++ +M   G+ P+VVT
Sbjct: 396 GNVEEAFKIKEKMEKEEIF-PSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVT 454

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-------- 302
           Y  +   +   G  D+A     EM   G  PN   C  I+S   + G+I EA        
Sbjct: 455 YGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMV 514

Query: 303 ------------------------LRFARTMKEYGVH---PNLVIFNLLIKGFVEIMDRD 335
                                    + A T+ E  +    PN V++N+ + G  +    +
Sbjct: 515 DFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVN 574

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
                   +      PD  TY T+++ +S AG++++   + D+M   G+ P+   Y+ L 
Sbjct: 575 DARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALL 634

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G  +    ++A  L   +   G  PNVV +  +I G+C  GS   A+++  KM + G+S
Sbjct: 635 NGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGIS 694

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P++ T+ +L+ G+ +      A ++L  MKA  V    +TF  L E     G  K+  ++
Sbjct: 695 PSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKL 754



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 97/426 (22%), Positives = 208/426 (48%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++RS   L+++L++RG+   A  +++ +      P + T   ++ A     +       +
Sbjct: 30  SLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVFTCAIMVNAYCKAGKVERAVEFV 89

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++E+ G + +++ +N++++ +   G++E A      M E G+     T   LIKGY   
Sbjct: 90  REMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQ 149

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K EE+ K+L  M +E  V  +   Y  L+  +C    + +A  V  +M   G+K ++  
Sbjct: 150 CKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFV 209

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            N++   Y +NG+  + E +++ M    ++P+  +   ++ GYC++G   +A      M 
Sbjct: 210 CNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQML 269

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P +V +N L+KG     D      +  LM +  V P+ + Y T+++     G   
Sbjct: 270 RKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFS 329

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   ++DD+   GI    +A++ +  G  +  E + A+E    M E G  P+ + + T+ 
Sbjct: 330 RALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLS 389

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+C  G+++ A ++ +KM +  + P+++ + +L+ G   +++  +  ++L  M   G+ 
Sbjct: 390 DGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLS 449

Query: 491 PQKSTF 496
           P   T+
Sbjct: 450 PNVVTY 455



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 196/415 (47%), Gaps = 2/415 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L++  +  G  + A+ +   + E G   + VT T L+     Q +      ++ ++
Sbjct: 103 SYNSLVDGYVSLGDIEGAKGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREM 162

Query: 134 E-ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           E E+G+  D   + A+I+ + + G M +A+    +M + GL       N+LI GY   G+
Sbjct: 163 EKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQ 222

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             E  +LL  M R+ ++KP+  +Y  LV  +C +   ++A+NV  +M   G++P VVTYN
Sbjct: 223 VHEGERLLMCM-RKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYN 281

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+     + G+   A  +   M   GV PN      ++ G  K G    AL     +   
Sbjct: 282 TLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILAR 341

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G++ ++  FN +I G  ++ + DG  E    M+E    PD ITY T+ + +   G +++ 
Sbjct: 342 GINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEA 401

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            +I + M K  I P    Y+ L  G    ++  K  +LL  M   G  PNVV +  +I+G
Sbjct: 402 FKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAG 461

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           WC  G +D+A   + +M   G +PN+     ++       +   A  +LQ M  F
Sbjct: 462 WCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDF 516



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 188/393 (47%), Gaps = 10/393 (2%)

Query: 84  ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
           E+G  + A  +F+N+ + G KPSL +  +LL+ L  +    S   +  Q+    + PD  
Sbjct: 8   EKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLDIVPDVF 67

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
               ++NA+ ++G +E A++   +M++ G      +YN+L+ GY   G  E +  +L  M
Sbjct: 68  TCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAKGVLKFM 127

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM-AASGMKPDVVTYNTIATAYAQNG 262
           S +G V  N  T  +L++ +C +  + EA  V+ +M    G+  D   Y  +   Y + G
Sbjct: 128 SEKG-VMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVG 186

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
           +   A  V  EM   G++ N   C  +I+GYCK G++ E  R    M++  + P+   + 
Sbjct: 187 KMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYC 246

Query: 323 LLIKGFVEIMDRDGVDE----VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
            L+ G+     RDG+      V   M    + P V+TY+T++      G       ++  
Sbjct: 247 TLVDGYC----RDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHL 302

Query: 379 MGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
           M + G+ P+   Y  L  G  +  +  +A  L   ++  G + ++  F T+I+G C  G 
Sbjct: 303 MLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGE 362

Query: 439 MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
           MD A E F +M E G  P+  T+ TL  GY + 
Sbjct: 363 MDGAKETFKRMEELGCKPDGITYRTLSDGYCKV 395



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 98/401 (24%), Positives = 184/401 (45%), Gaps = 37/401 (9%)

Query: 148 VINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
           ++  ++E G ++ A+  F  M + G  P+  + N+L+      G+   +V + D M R  
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL- 60

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE---- 263
           ++ P++ T  ++V A+C    +  A   + +M   G + + V+YN++   Y   G+    
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 264 -------------------------------ADQAEEVIVEME-HNGVQPNGRTCGIIIS 291
                                           ++AE+V+ EME  +GV  +    G +I 
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 292 GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP 351
           GYCK GK+ +A+R    M + G+  NL + N LI G+ +       + +L  M++  + P
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           D  +Y T+++ +   G   K   + D M + GI+P    Y+ L KG  R  + + A  L 
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M++ G  PN V + T++ G    G   RA+ ++D +   G++ ++  F T++ G  + 
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKM 360

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            +   A+E  + M+  G  P   T+  L++     G  +EA
Sbjct: 361 GEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEA 401



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 117/514 (22%), Positives = 219/514 (42%), Gaps = 49/514 (9%)

Query: 57  QTHCSFCMNKESCRTVRSMTK-------------LMNSLIERGKPQEAQAIFNNLIEGGH 103
           + +C  C  +E+ + +R M K             L++   + GK  +A  + + +++ G 
Sbjct: 144 KGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGL 203

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           K +L    +L+       + +    ++  + +  + PDS  +  +++ +   G   +A +
Sbjct: 204 KMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFN 263

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              +M   G+ PT  TYNTL+KG    G  +++++L  LM + G V PN   Y  L+   
Sbjct: 264 VCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRG-VTPNEVGYCTLLDGL 322

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
               + + A  +   + A G+   +  +NT+     + GE D A+E    ME  G +P+G
Sbjct: 323 FKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDG 382

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T   +  GYCK G ++EA +    M++  + P++ ++N LI G         + ++LA 
Sbjct: 383 ITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAE 442

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M    ++P+V+TY  ++  W   G +DK    + +M   G  P+    S +     R   
Sbjct: 443 MDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGR 502

Query: 404 PEKAEELLMTMI--------------------------------ESGFH---PNVVIFTT 428
            ++A  LL  M+                                ES      PN V++  
Sbjct: 503 IDEANMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNI 562

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
            ++G C  G ++ A   F  +     +P+  T+ TL+ G+S A     A  +   M   G
Sbjct: 563 AMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKG 622

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           + P  +T+  L      +G    A+R+  K+  K
Sbjct: 623 LVPNITTYNALLNGLCKSGYLDRARRLFDKLHLK 656



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 140/326 (42%), Gaps = 36/326 (11%)

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           ++++ +  +  +  A +V   M   G KP + + N++ +   + GE+  A  V  +M   
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
            + P+  TC I+++ YCK GK++ A+ F R M++ G   N V +N L+ G+V + D +G 
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 338 DEVLALM------------------------------------KEFRVNPDVITYSTIMN 361
             VL  M                                    KE  V  D   Y  +++
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            +   G M     + D+M K G+K +    + L  GY +  +  + E LLM M +    P
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +   + T++ G+C DG   +A  V D+M   G+ P + T+ TL+ G         A  + 
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATG 507
            +M   GV P +  +  L +     G
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMG 326



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 73/362 (20%), Positives = 159/362 (43%), Gaps = 21/362 (5%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           PS+  Y +L+  L   K+ + +  ++++++  G+ P+ + + A+I  + + G +++A   
Sbjct: 415 PSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSA 474

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           +++M   G  P     + ++      G+ +E+  LL  M            +++++   C
Sbjct: 475 YFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMV----------DFDLVLDHRC 524

Query: 225 NEK------NITEAWNVMHKMAASGMK---PDVVTYNTIATAYAQNGEADQAEEVIVEME 275
            E          + W +   +  S +K   P+ V YN       ++G+ + A    + + 
Sbjct: 525 LEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLS 584

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
           H    P+  T   +I G+   G + EA      M   G+ PN+  +N L+ G  +    D
Sbjct: 585 HGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCKSGYLD 644

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
               +   +    + P+V+TY+ +++ +  +G   +  ++   M K GI P    YS L 
Sbjct: 645 RARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGISPSIITYSSLI 704

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G+ ++ + E+A +LL  M  S     +  F+ ++ G    G + +  ++ + M  H   
Sbjct: 705 NGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKLHNMM--HMAC 762

Query: 456 PN 457
           P+
Sbjct: 763 PS 764



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 142/316 (44%), Gaps = 36/316 (11%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G  P++VTY  L+A    Q R +   S   ++   G  P+ I  + ++++    G ++EA
Sbjct: 447 GLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEA 506

Query: 162 ------------------MDTF----------WK----MKESGL---TPTTSTYNTLIKG 186
                             ++ F          WK    + ES +    P    YN  + G
Sbjct: 507 NMLLQKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAG 566

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
              +GK  ++ +    +S  G+  P+  TY  L+  +     + EA+N+  +M   G+ P
Sbjct: 567 LCKSGKVNDARRFFLGLS-HGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVP 625

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           ++ TYN +     ++G  D+A  +  ++   G+ PN  T  I+I GYCK G  +EAL   
Sbjct: 626 NITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLR 685

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             M + G+ P+++ ++ LI GF +  D +   ++L  MK   V+  + T+S ++      
Sbjct: 686 GKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQH 745

Query: 367 GFMDKCKEIFDDMGKA 382
           G + K  ++ + M  A
Sbjct: 746 GDVKKMSKLHNMMHMA 761



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 80/179 (44%), Gaps = 9/179 (5%)

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           I+  ++  G +     +FD+MGK G KP   + + L    V+  E   A  +   M    
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P+V     +++ +C  G ++RA+E   +M + G   N  ++ +L+ GY        A+
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVE 537
            +L+ M   GV   K T  LL +        +EA+++L          EME E+ + V+
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVL---------REMEKEDGVVVD 171


>gi|449446855|ref|XP_004141186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 207/419 (49%), Gaps = 1/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+   + +G    A   F++++  G KPS+ T   ++A++    R + + S   Q+  + 
Sbjct: 111 LIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWSFFKQMLTSR 170

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   FN +I+     G +++A++    M+ +G  PT  +YNTL+      G+ + ++
Sbjct: 171 VCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFAL 230

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L+  M  +G ++ ++ TYN+ + + C      + + V+ KM    + P+ V+YNT+   
Sbjct: 231 VLIHHMECKG-IQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLING 289

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G+   A  V  EM    + PN  T  I+I+GYC  G  +EALR    M+   V PN
Sbjct: 290 FVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVMEANDVRPN 349

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V    L+ G  +    D    +L      R + + I+++ +++     G +D+  ++  
Sbjct: 350 EVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAFQLLI 409

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K G+ PD   +S+L  G+ +     KA+E++  +   GF PN VIF+T+I   C  G
Sbjct: 410 EMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVG 469

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           ++  A++ +  M  +G + +  T  +L+    E  +   AEE L  +   G+ P   TF
Sbjct: 470 NVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTF 528



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 201/419 (47%), Gaps = 1/419 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +    C  V S   L++ L  +GK ++A  I   +   G+ P++V+Y TLL+    + RF
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRF 226

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                ++  +E  G+  D   +N  I++   +    +      KM+   +TP   +YNTL
Sbjct: 227 KFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTL 286

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G+   GK   + ++ + M  E N+ PNL TYN+L+  +C   N  EA  V+  M A+ 
Sbjct: 287 INGFVKEGKIGVATRVFNEMI-ELNLSPNLITYNILINGYCINGNFEEALRVLDVMEAND 345

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++P+ VT  T+     ++ + D A  ++     N    N  +  ++I G C+ G + EA 
Sbjct: 346 VRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLLDEAF 405

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
           +    M + GVHP+++ F++LI GF ++ + +   EV++ +      P+ + +ST++   
Sbjct: 406 QLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFSTLIYNS 465

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G + +  + +  M   G   D    + L        +  +AEE L  +   G  PN 
Sbjct: 466 CKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNS 525

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           V F  II+G+ + G    A  VFD+M   G  P+  T+ +L+    + +  W A ++L+
Sbjct: 526 VTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLK 584



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 206/465 (44%), Gaps = 37/465 (7%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L+N  ++ GK   A  +FN +IE    P+L+TY  L+    I   F     ++  +
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRVLDVM 341

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E N + P+ +    ++N   +S   + A +   +   +  +    ++  +I G    G  
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDGLCRNGLL 401

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+ +LL  M ++G V P++ T++VL+  +C   NI +A  VM K+   G  P+ V ++T
Sbjct: 402 DEAFQLLIEMCKDG-VHPDIITFSVLINGFCKVGNINKAKEVMSKIYREGFVPNNVIFST 460

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G   +A +    M  NG   +  TC  +++  C+ GK+ EA  F   +   G
Sbjct: 461 LIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIG 520

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVL-------------------------------- 341
           + PN V F+ +I G+  + D  G   V                                 
Sbjct: 521 LVPNSVTFDCIINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEAR 580

Query: 342 ALMKEFRVNP---DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            L+K+    P   D I+Y+T++   S +G + +   +F++M +  I PD++ Y+ +  G 
Sbjct: 581 KLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGL 640

Query: 399 VREQEPEKAEELLMTMIESGFHP-NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           +RE     A   L  +++      N +++T  I G    G    A+ +F +M E G+S +
Sbjct: 641 IREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLD 700

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           L    ++  GYS   + + A  ++   +   V P  +TF +L   
Sbjct: 701 LIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHG 745



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/470 (22%), Positives = 200/470 (42%), Gaps = 38/470 (8%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           +C+N+ S   + S T +++ L   G   EA  +   + + G  P ++T++ L+       
Sbjct: 376 YCINRTSLNCI-SHTVMIDGLCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVG 434

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG--------- 172
             N    +MS++   G  P+++ F+ +I    + GN+ EAM  +  M  +G         
Sbjct: 435 NINKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEAMKFYAAMNLNGQNADNFTCN 494

Query: 173 --------------------------LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
                                     L P + T++ +I GY   G    +  + D M   
Sbjct: 495 SLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDRMISC 554

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G+  P+  TY  L++  C  +N  EA  ++ K+    +  D ++YNT+    +++G   +
Sbjct: 555 GH-HPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLE 613

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF-ARTMKEYGVHPNLVIFNLLI 325
           A  +  EM  N + P+  T   I+SG  +EG++  A  F  R M++  +  N +++   I
Sbjct: 614 AVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFI 673

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G  +         +   M+E  ++ D+I  ++I + +S  G +     +        + 
Sbjct: 674 DGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVI 733

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P+   ++IL  GY R Q+     +L   M  SGF PN + + ++I G C+ G ++  I++
Sbjct: 734 PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
                    + +  TF  L+    E     +  ++   M+ F V   K T
Sbjct: 794 LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDT 843



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 105/480 (21%), Positives = 189/480 (39%), Gaps = 35/480 (7%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            ++N     G    A ++F+ +I  GH PS  TY +LL  L   + F     ++ ++    
Sbjct: 531  IINGYANVGDGSGAFSVFDRMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIP 590

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            +  D+I +N +I   S+SGN+ EA+  F +M ++ + P + TY  ++ G    G+   + 
Sbjct: 591  LAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAF 650

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
              L  + ++  +  N   Y   +           A  +  +M   G+  D++  N+I   
Sbjct: 651  IFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDG 710

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            Y++ G+   A  +I +  +  V PN  T  I++ GY +   I    +    M+  G  PN
Sbjct: 711  YSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPN 770

Query: 318  ------LVI-----------------------------FNLLIKGFVEIMDRDGVDEVLA 342
                  L++                             FN+LI+   EI D D V ++  
Sbjct: 771  RLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTH 830

Query: 343  LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
             M+ FRV+ D  T   + +                +M K G  P +  Y  + K   R  
Sbjct: 831  NMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVG 890

Query: 403  EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
            + + A +L   M+  G   +      ++ G    G ++ A+ +  +M      P   TF 
Sbjct: 891  DIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFT 950

Query: 463  TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            TLM  + +      A  +  +M+ + V      + +L  A  A G    A     +IK K
Sbjct: 951  TLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQK 1010



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 172/412 (41%), Gaps = 64/412 (15%)

Query: 166 WKMKESGLTPTTSTY------NTLIKG--YG--------IAGKPEESVKLLD-LMSREGN 208
           W +K+ GL P   T+      + L+K   YG        +A K   S  L   LM     
Sbjct: 41  WVIKQPGLEPNHLTHILGITTHVLVKARLYGYAKSILKHLAQKNSGSNFLFGVLMDTYPL 100

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
              N   +++L+R +  +  +  A N    M   G KP V T N I  +  +N  A    
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVW 160

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
               +M  + V PN  +  I+IS  C +GK+K+A+     M+  G  P +V +N L+   
Sbjct: 161 SFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWC 220

Query: 329 VEIMDRDGVDEVLALMKEFR-VNPDVITYSTIM-----NAWSTAGFMDKCKEIFDDMGKA 382
            +   R     VL    E + +  DV TY+  +     N+ S  G++     +   M   
Sbjct: 221 CK-KGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYL-----VLKKMRNK 274

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
            I P+  +Y+ L  G+V+E +   A  +   MIE    PN++ +  +I+G+C +G+ + A
Sbjct: 275 MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEA 334

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ-------------------- 482
           + V D M  + V PN  T  TL+ G  ++ +   A  IL+                    
Sbjct: 335 LRVLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYCINRTSLNCISHTVMIDG 394

Query: 483 ------IMKAF---------GVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
                 + +AF         GVHP   TF +L       G   +AK ++SKI
Sbjct: 395 LCRNGLLDEAFQLLIEMCKDGVHPDIITFSVLINGFCKVGNINKAKEVMSKI 446



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/379 (19%), Positives = 154/379 (40%), Gaps = 36/379 (9%)

Query: 76   TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
            T  ++ L + G+ + A  +F  + E G    L+   ++    +   +  S  S++S+   
Sbjct: 670  TCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRN 729

Query: 136  NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
              + P+   FN +++ +S   ++      +  M+ SG  P   TY++LI G    G  E 
Sbjct: 730  KNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLEL 789

Query: 196  SVKLLDLMSREGNVKPNLRTYNVLVRAWC-------------------------NEKNIT 230
             +K+L +   E +   +L T+N+L+R  C                          +K +T
Sbjct: 790  GIKMLKMFIAESSTIDDL-TFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVT 848

Query: 231  EA----------WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
            +           +  MH+M   G  P    Y T+     + G+   A ++  +M   G+ 
Sbjct: 849  DVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGIS 908

Query: 281  PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
             +      ++ G    GKI+EA+   + M      P    F  L+  F +  +      +
Sbjct: 909  LDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL 968

Query: 341  LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
              LM+ +RV  D++ Y+ +++A    G +    + ++++ + G+ P+   Y +L      
Sbjct: 969  KILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAIST 1028

Query: 401  EQEPEKAEELLMTMIESGF 419
            +    + E +L  + + G 
Sbjct: 1029 KHYVSRGEIVLKDLNDRGL 1047


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 118/456 (25%), Positives = 208/456 (45%), Gaps = 3/456 (0%)

Query: 72  VRSMTKLMNSLI--ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           V S + LM++    +R    EA  + + +   G KP+  TY T L  L+  ++  S  + 
Sbjct: 209 VYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNF 268

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           +  + + G   ++  FNAVI  F   G ++EA++ F  MK+ GL P T +Y+ L+ G   
Sbjct: 269 LQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCK 328

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G       LL  M+R G + P L +Y+ L+   C    +  A+ +  ++   G K D +
Sbjct: 329 QGDVLTGYDLLVEMARNG-IAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHI 387

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y+ I     Q+   +   ++  +M H+   P+      +I  +C+   + +AL     M
Sbjct: 388 VYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELM 447

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            + GV PN+V   +L+ GF +    D     L  +++F + P++  Y  I+N        
Sbjct: 448 LDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKS 507

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D    IF DM K G  PD   YSI+   +V+  +  +A  L   M++ G  PNV  +T++
Sbjct: 508 DHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSL 567

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I+G C D  +   + +F  M   G++P+   + +L+  Y +      A EI + M   G+
Sbjct: 568 INGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGL 627

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
                 +  L            A+ ++ ++ NK  T
Sbjct: 628 SADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLT 663



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 104/456 (22%), Positives = 203/456 (44%), Gaps = 4/456 (0%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
            C     C T      ++      G+ QEA  +F+ + +GG  P   +Y+ L+  L  Q 
Sbjct: 272 LCQRGNPCNTY-CFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQG 330

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
              + + ++ ++  NG+ P  + ++++++    +G +E A + F +++E G       Y+
Sbjct: 331 DVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYS 390

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            ++ G       E    L + M    N  P+   Y  L+ A+C  +N+T+A  V   M  
Sbjct: 391 IILNGCCQHLNIEVVCDLWNDMVHH-NFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLD 449

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
           SG+ P+VVT   +   + +    D+A   + ++   G+ PN     +II+G CK  K   
Sbjct: 450 SGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDH 509

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
                  M + G  P+ V+++++I  FV+ +       +   M +    P+V TY++++N
Sbjct: 510 VWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLIN 569

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                  + +   +F  M   G+ PD   Y+ L   Y +    + A E+   M + G   
Sbjct: 570 GLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAALEIFRGMGKLGLSA 629

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +  ++T +I G+    +MD A  + ++M   G++P++ T+  L+ GY +     +A    
Sbjct: 630 DAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGYFKIGDERKANMTY 689

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGL--TKEAKRI 515
             M   G+ P      +L     A G   ++E K +
Sbjct: 690 NSMLQAGITPDAKLSCILGFGNDADGFEDSREEKDV 725



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/429 (23%), Positives = 197/429 (45%), Gaps = 13/429 (3%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +  +I  F E    E+A+ T+ + K+ G+       N L+K      +   +  L D M 
Sbjct: 144 YATIIRIFVELSMFEDALLTYTEAKKVGVELQLC--NFLLKCLVERNQIIYARSLFDDMK 201

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNI--TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
             G   PN+ +Y+VL+ A+ +   +   EA+ ++ +M   G+KP+  TY T     ++  
Sbjct: 202 SSGP-SPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYGTYLYGLSRTR 260

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
           +   A   +  +   G   N      +I G+C+EG+++EA+     MK+ G+ P+   ++
Sbjct: 261 QVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKGGLVPDTHSYS 320

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +L+ G  +  D     ++L  M    + P +++YS++++    AG ++   E+F  + + 
Sbjct: 321 ILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELAFELFRRLEEQ 380

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G K D   YSI+  G  +    E   +L   M+   F P+   +T++I  +C   ++  A
Sbjct: 381 GFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYAFCRHRNLTDA 440

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           + VF+ M + GVSPN+ T   L+ G+ + R    A   L  ++ FG+ P    + ++   
Sbjct: 441 LGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGIVPNLCMYRVIING 500

Query: 503 RRATGLTKEAKRILSKIKNKERTNEMEAEE---DIPVESLE-----RLYHKEATTASYPN 554
                 +     I + +  +    +        D  V++L+     RL+HK     + PN
Sbjct: 501 LCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEGTKPN 560

Query: 555 LLQIPNVVS 563
           +    ++++
Sbjct: 561 VFTYTSLIN 569


>gi|12321310|gb|AAG50731.1|AC079041_24 PPR-repeat protein, putative [Arabidopsis thaliana]
          Length = 690

 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/459 (24%), Positives = 214/459 (46%), Gaps = 35/459 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++L  +G+  +A      ++E G +  +V+   +L  L++ +       ++S V + G
Sbjct: 223 VLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCG 281

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG------ 191
             P+ + F  +IN F + G M+ A D F  M++ G+ P    Y+TLI GY  AG      
Sbjct: 282 PAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGH 341

Query: 192 -----KPEESVKL--------LDLMSREGN---------------VKPNLRTYNVLVRAW 223
                   + VKL        +D+  + G+               + PN+ TY +L++  
Sbjct: 342 KLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGL 401

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C +  I EA+ +  ++   GM+P +VTY+++   + + G       +  +M   G  P+ 
Sbjct: 402 CQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDV 461

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
              G+++ G  K+G +  A+RF+  M    +  N+V+FN LI G+  +   D   +V  L
Sbjct: 462 VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRL 521

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M  + + PDV T++T+M      G +++   +F  M K G++PDA AY  L   + +  +
Sbjct: 522 MGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMK 581

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
           P    +L   M  +    ++ +   +I        ++ A + F+ + E  + P++ T+ T
Sbjct: 582 PTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNT 641

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           ++ GY   R+   AE I +++K     P   T  +L   
Sbjct: 642 MICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 680



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 67/291 (23%), Positives = 145/291 (49%), Gaps = 1/291 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+  L + G+  EA  ++  +++ G +PS+VTY++L+          S  ++  
Sbjct: 391 VVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYE 450

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G  PD + +  +++  S+ G M  AM    KM    +      +N+LI G+    
Sbjct: 451 DMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLN 510

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E++K+  LM   G +KP++ T+  ++R    E  + EA  +  +M   G++PD + Y
Sbjct: 511 RFDEALKVFRLMGIYG-IKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAY 569

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+  A+ ++ +     ++   M+ N +  +   C ++I    K  +I++A +F   + E
Sbjct: 570 CTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIE 629

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
             + P++V +N +I G+  +   D  + +  L+K     P+ +T + +++ 
Sbjct: 630 GKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHV 680



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/373 (22%), Positives = 170/373 (45%), Gaps = 5/373 (1%)

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPT-TSTYNTLIKGYGIAGKPEESVKL 199
           DS++   ++N+   S  ++   D F K+   G+ P+  S +  ++      G+  +++  
Sbjct: 182 DSVY--RMLNSLIGSDRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDF 239

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
             L+   G  +  + + N +++    ++ I  A  ++  +   G  P+VVT+ T+   + 
Sbjct: 240 HRLVMERG-FRVGIVSCNKVLKGLSVDQ-IEVASRLLSLVLDCGPAPNVVTFCTLINGFC 297

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           + GE D+A ++   ME  G++P+      +I GY K G +    +        GV  ++V
Sbjct: 298 KRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVV 357

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           +F+  I  +V+  D      V   M    ++P+V+TY+ ++      G + +   ++  +
Sbjct: 358 VFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQI 417

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            K G++P    YS L  G+ +         L   MI+ G+ P+VVI+  ++ G    G M
Sbjct: 418 LKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLM 477

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
             A+    KM    +  N+  F +L+ G+    +   A ++ ++M  +G+ P  +TF  +
Sbjct: 478 LHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTV 537

Query: 500 AEARRATGLTKEA 512
                  G  +EA
Sbjct: 538 MRVSIMEGRLEEA 550



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/330 (22%), Positives = 149/330 (45%), Gaps = 3/330 (0%)

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  ++++++    ++ G V P    Y +L  +      +    +   K+   G++P  V+
Sbjct: 160 GMVDKALEIFVYSTQLGVVIPQDSVYRML-NSLIGSDRVDLIADHFDKLCRGGIEPSGVS 218

Query: 251 -YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            +  +  A    GE  +A +    +   G +    +C  ++ G   + +I+ A R    +
Sbjct: 219 AHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVD-QIEVASRLLSLV 277

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            + G  PN+V F  LI GF +  + D   ++  +M++  + PD+I YST+++ +  AG +
Sbjct: 278 LDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGML 337

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
               ++F      G+K D   +S     YV+  +   A  +   M+  G  PNVV +T +
Sbjct: 338 GMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTIL 397

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I G C DG +  A  ++ ++ + G+ P++ T+ +L+ G+ +         + + M   G 
Sbjct: 398 IKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGY 457

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            P    + +L +     GL   A R   K+
Sbjct: 458 PPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 103/247 (41%), Gaps = 22/247 (8%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSL--------------------V 108
           C  +RS   L   +I+ G P +   I+  L++G  K  L                    V
Sbjct: 439 CGNLRSGFALYEDMIKMGYPPDV-VIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVV 497

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
            + +L+       RF+    +   +   G+ PD   F  V+      G +EEA+  F++M
Sbjct: 498 VFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRM 557

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
            + GL P    Y TLI  +    KP   ++L DLM R   +  ++   NV++        
Sbjct: 558 FKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRN-KISADIAVCNVVIHLLFKCHR 616

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           I +A    + +    M+PD+VTYNT+   Y      D+AE +   ++     PN  T  I
Sbjct: 617 IEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTI 676

Query: 289 IISGYCK 295
           +I   CK
Sbjct: 677 LIHVLCK 683


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 214/477 (44%), Gaps = 28/477 (5%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L + G+ +E   +   + E G +PS   Y  ++     +++      ++ ++ E G
Sbjct: 118 LVKGLCKAGRGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKG 177

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P  +   AVINA+ + G M +A+     MK  G  P   TYN L++G+   GK  +++
Sbjct: 178 LAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAM 237

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL+ M R   V P+  TYN+L+R  C + +I  A+ ++  M   G+  D  TYN +  A
Sbjct: 238 ALLNKM-RVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINA 296

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             ++G  DQA  +   +E  G++PN  T   +I+G CK GK+  A +F   M   G  P+
Sbjct: 297 LCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPD 356

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKE 374
              ++  I+   ++    G  E L+ + E     V P  + Y+ +++             
Sbjct: 357 TYTYSSFIEHLCKM---KGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVAR 413

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
            + +M  +G  PD   Y+   + Y  E    +AE +LM M ++G   + + + T++ G  
Sbjct: 414 TWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHA 473

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR-----------QPWRAEEILQI 483
           S G  D A+ +  +M      PN  T+  L+      R             W+A E+  +
Sbjct: 474 SIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDV 533

Query: 484 MKAFGVH------PQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI 534
              F V       P   T+  + E     G T+EA  ++S +K     + +   EDI
Sbjct: 534 FGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKE----DSISLNEDI 586



 Score =  171 bits (434), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 174/360 (48%), Gaps = 11/360 (3%)

Query: 109 TYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM 168
           TY  ++ +L  +    S    +S +  +G  PD+  FN++I  +  +  ++ A D F KM
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
              G      +Y  LI+G+   G+ +E+V+L   M      +P++  Y  LV+  C    
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD-----QPDMHMYAALVKGLCKAGR 127

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
             E   ++ +M   G +P    Y  +        +A +AEE++ EM   G+ P   TC  
Sbjct: 128 GEEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTA 187

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +I+ YCKEG++ +ALR    MK  G  PN+  +N L++GF    +   V + +AL+ + R
Sbjct: 188 VINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFC---NEGKVHKAMALLNKMR 244

Query: 349 ---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
              VNPD +TY+ ++      G ++    +   M   G+  D + Y+ L     ++   +
Sbjct: 245 VCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 304

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +A  L  ++   G  PN V F ++I+G C  G +D A +  +KM   G +P+  T+ + +
Sbjct: 305 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFI 364



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 110/439 (25%), Positives = 199/439 (45%), Gaps = 5/439 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++ SL  R     A    + ++  G +P   T+ +L+       + +    +  ++   G
Sbjct: 17  VIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRG 76

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              D + + A+I  F E+G ++EA++ F +M +    P    Y  L+KG   AG+ EE +
Sbjct: 77  FAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGEEGL 132

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L  M +E   +P+ R Y  +V   C E+   EA  ++ +M   G+ P VVT   +  A
Sbjct: 133 LMLRRM-KELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINA 191

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G    A  V+  M+  G +PN  T   ++ G+C EGK+ +A+     M+  GV+P+
Sbjct: 192 YCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPD 251

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +NLLI+G       +    +L LM+   +  D  TY+ ++NA    G  D+   +FD
Sbjct: 252 AVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFD 311

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            +   GIKP+A  ++ L  G  +  + + A + L  M+ +G  P+   +++ I   C   
Sbjct: 312 SLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMK 371

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
                +    +M +  V P+   +  ++    + R           M + G +P   T+ 
Sbjct: 372 GSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYT 431

Query: 498 LLAEARRATGLTKEAKRIL 516
               A    G   EA+ +L
Sbjct: 432 TSMRAYCIEGRLNEAENVL 450



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/493 (23%), Positives = 210/493 (42%), Gaps = 58/493 (11%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M    C+  V +   L+      GK  +A A+ N +   G  P  VTY  L+    I   
Sbjct: 208 MKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGH 267

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
             S   ++  +E +G+  D   +NA+INA  + G  ++A   F  ++  G+ P   T+N+
Sbjct: 268 IESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNS 327

Query: 183 LIKGYGIAGKPEESVKLLDLM------------------------SREG----------N 208
           LI G   +GK + + K L+ M                        S+EG          +
Sbjct: 328 LINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKD 387

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           VKP+   Y +++     E+N         +M +SG  PDVVTY T   AY   G  ++AE
Sbjct: 388 VKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAE 447

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            V++EM  NGV  +      ++ G+   G+   A+   + M      PN   + +L++  
Sbjct: 448 NVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHL 507

Query: 329 V--------------------EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           V                    E+ D  G+ +V   MK+    P+  TYS+I+  +S  G 
Sbjct: 508 VRMRLVEDVLPLTPAGVWKAIELTDVFGLFDV---MKKNEFLPNSGTYSSILEGFSEDGR 564

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            ++   +   M +  I  +   Y+ L   + + +    A  L+ +MI+ GF P+++ +  
Sbjct: 565 TEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQH 624

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++SG   +G  D+A E+F        SP+   ++ ++ G  +      + E++ +++   
Sbjct: 625 LLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMN 684

Query: 489 VHPQKSTFLLLAE 501
             P   T+ +L E
Sbjct: 685 CRPSHQTYAMLTE 697



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 115/488 (23%), Positives = 198/488 (40%), Gaps = 51/488 (10%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K +EA+ +   + E G  P +VT T ++ A   + R +    ++  ++  G  P+   +N
Sbjct: 162 KAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYN 221

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           A++  F   G + +AM    KM+  G+ P   TYN LI+G  I G  E + +LL LM  +
Sbjct: 222 ALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGD 281

Query: 207 G----------------------------------NVKPNLRTYNVLVRAWCNEKNITEA 232
           G                                   +KPN  T+N L+   C    +  A
Sbjct: 282 GLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIA 341

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
           W  + KM ++G  PD  TY++      +   + +    I EM    V+P+     I+I  
Sbjct: 342 WKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHK 401

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
             KE       R    M   G +P++V +   ++ +      +  + VL  M +  V  D
Sbjct: 402 LLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVD 461

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE------- 405
            + Y+T+M+  ++ G  D    I   M      P+   Y IL +  VR +  E       
Sbjct: 462 TMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTP 521

Query: 406 ----KAEE------LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
               KA E      L   M ++ F PN   +++I+ G+  DG  + A  +   M E  +S
Sbjct: 522 AGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSIS 581

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
            N   +  L+  + ++++   A  ++  M   G  P   ++  L       G T +AK I
Sbjct: 582 LNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEI 641

Query: 516 LSKIKNKE 523
               + K+
Sbjct: 642 FMNSRWKD 649



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/314 (24%), Positives = 135/314 (42%), Gaps = 39/314 (12%)

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           M R     P   TYN ++R+ C   ++  A   +  M  SG +PD  T+N++   Y +  
Sbjct: 1   MHRHAPPAPAAPTYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTN 60

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
           + D A ++  +M   G   +  +   +I G+C+ G+I EA+     M +           
Sbjct: 61  QVDVARDLFDKMPLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQ----------- 109

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
                                       PD+  Y+ ++     AG  ++   +   M + 
Sbjct: 110 ----------------------------PDMHMYAALVKGLCKAGRGEEGLLMLRRMKEL 141

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G +P   AY+ +      E++ ++AEE+L  M E G  P VV  T +I+ +C +G M  A
Sbjct: 142 GWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDA 201

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           + V + M   G  PN+ T+  L+ G+    +  +A  +L  M+  GV+P   T+ LL   
Sbjct: 202 LRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRG 261

Query: 503 RRATGLTKEAKRIL 516
           +   G  + A R+L
Sbjct: 262 QCIDGHIESAFRLL 275


>gi|414871694|tpg|DAA50251.1| TPA: hypothetical protein ZEAMMB73_705675 [Zea mays]
          Length = 1161

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/431 (24%), Positives = 212/431 (49%), Gaps = 4/431 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+NSL   G+ ++A+ +   + +  H  + VTY T+L     + RF +   ++  +E + 
Sbjct: 232 LLNSLCTNGEFRKAEDMLQKM-KSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDS 290

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D   +N +I+          A     +M++  LTP   TYNTLI G+   GK   + 
Sbjct: 291 VQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHAR 350

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            + + M R+ N+ P++ TY  ++  +C  + I +A +++ +M  +G+ P  +TY+ +   
Sbjct: 351 YVFNHMLRQ-NLVPSVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNG 409

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y +      A  ++ +++  G+  N     I+I G+C+ G+I +A +  ++M E G+ P+
Sbjct: 410 YCKVSMLGPAIYLMEDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPD 469

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           ++ ++ LI G   +       E+L+ M++  + P+ + Y+T++  +  AG++ +  + F 
Sbjct: 470 VITYSALINGMCRMAKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFV 529

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           D+ + G+  +   ++ L   + RE    +AE     M       + V F  II  +C  G
Sbjct: 530 DIYRRGLVANPVIHNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRG 589

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF- 496
           ++  A  V+D M  +G SPN+ T++ L+ G  +     +A + +  +        + TF 
Sbjct: 590 NIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFN 649

Query: 497 -LLLAEARRAT 506
            LLL   R  T
Sbjct: 650 ALLLGICRYGT 660



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/499 (22%), Positives = 222/499 (44%), Gaps = 48/499 (9%)

Query: 67  ESCRTVRSMT--KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           +SC    S+T   +++  +++G+ + A  +  ++     +  + TY  ++  L   KR  
Sbjct: 253 KSCHISNSVTYNTILHWYVKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRST 312

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
               ++ ++ ++ + PD   +N +IN F   G +  A   F  M    L P+ +TY T+I
Sbjct: 313 RAFLLLKRMRKDDLTPDECTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMI 372

Query: 185 KGYGIAGKPEESVKLL------------------------------------DLMSREGN 208
            GY    + ++++ +L                                    DL SR   
Sbjct: 373 DGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGIT 432

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           +   +RT  +L+  +C    I++A  ++  M   G+ PDV+TY+ +     +  +  + +
Sbjct: 433 INKTMRT--ILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETK 490

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
           E++  M+ +G+ PN      +I  YCK G +KEAL+    +   G+  N VI N L+  F
Sbjct: 491 EILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLVANPVIHNALLHAF 550

Query: 329 VEIMDRDGV----DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
                R+G+    +     M    ++ D ++++ I++++   G +     ++DDM + G 
Sbjct: 551 Y----REGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMVRYGY 606

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+   Y  L +G  +     +A + +  +++  F  +   F  ++ G C  G++D A++
Sbjct: 607 SPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLGICRYGTLDEALD 666

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + +KM ++   P++ T+  L+ G+    +   A  ILQ+M   GV P    +  L     
Sbjct: 667 LCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYTCLLNGLI 726

Query: 505 ATGLTKEAKRILSKIKNKE 523
             G  K A  +  +I  KE
Sbjct: 727 NEGQVKAASYVFHEIICKE 745



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 120/488 (24%), Positives = 215/488 (44%), Gaps = 43/488 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL---------------- 114
           +V + T +++      +  +A +I + +   G  PS +TY+ LL                
Sbjct: 364 SVATYTTMIDGYCRNRRIDKALSILSEMQITGVMPSELTYSALLNGYCKVSMLGPAIYLM 423

Query: 115 -----AALTIQKRFNSI--------------HSIMSQVEENGMDPDSIFFNAVINAFSES 155
                  +TI K   +I                I+  + E+G+DPD I ++A+IN     
Sbjct: 424 EDLKSRGITINKTMRTILIDGFCQVGEISKAKQILKSMFEDGIDPDVITYSALINGMCRM 483

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
             M E  +   +M++SG+ P    Y TLI  Y  AG  +E++K    + R G V  N   
Sbjct: 484 AKMHETKEILSRMQKSGILPNDVLYTTLICYYCKAGYVKEALKHFVDIYRRGLV-ANPVI 542

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           +N L+ A+  E  ITEA +    M+   +  D V++N I  +Y   G    A  V  +M 
Sbjct: 543 HNALLHAFYREGMITEAEHFRQYMSRMNISFDSVSFNRIIDSYCHRGNIVGAFSVYDDMV 602

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
             G  PN  T   ++ G C+ G + +A +F   + +     +   FN L+ G   I    
Sbjct: 603 RYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCLLDIPFAIDEKTFNALLLG---ICRYG 659

Query: 336 GVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
            +DE L L ++   N   PD+ TY+ +++ +   G +     I   M + G+ PD  AY+
Sbjct: 660 TLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQMMLEKGVVPDTVAYT 719

Query: 393 ILAKGYVREQEPEKAEELLMTMI-ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
            L  G + E + + A  +   +I + G + + + + ++++G+    +++    +   M +
Sbjct: 720 CLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMYQ 779

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
           + V PN  ++  LM GY +  Q  ++  + + M   G+ P   T+ LL       GL   
Sbjct: 780 NEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLIDI 839

Query: 512 AKRILSKI 519
           A + L K+
Sbjct: 840 AVKFLEKM 847



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 103/451 (22%), Positives = 210/451 (46%), Gaps = 2/451 (0%)

Query: 73   RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
            ++   L+  +   G   EA  +   +I+    P + TYT LL+    + +      I+  
Sbjct: 646  KTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKILPALVILQM 705

Query: 133  VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK-ESGLTPTTSTYNTLIKGYGIAG 191
            + E G+ PD++ +  ++N     G ++ A   F ++  + GL      YN+L+ GY +  
Sbjct: 706  MLEKGVVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGY-LKS 764

Query: 192  KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
            +   ++K +     +  V PN  +YN+L+  +      +++  +   M   G++PD VTY
Sbjct: 765  RNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTY 824

Query: 252  NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
              +    ++ G  D A + + +M   G+ P+     I+I+ + ++ K+  AL+    MK 
Sbjct: 825  RLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQVFNCMKW 884

Query: 312  YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
              + P+   F+ +I G +     D   +VL  M +  + P+   Y  ++NA    G +D+
Sbjct: 885  LHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDR 944

Query: 372  CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
               + ++M   GI P   A S + +G  R  + E+A  +  +M+ SG  P V  FTT++ 
Sbjct: 945  AFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMH 1004

Query: 432  GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
              C +  +  A+ +   M    +  ++ ++  L+ G  + +    A ++   MK+ G+ P
Sbjct: 1005 SLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWP 1064

Query: 492  QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              +T++ L  A  +TG  +  + +L  I+ +
Sbjct: 1065 NITTYITLTGAMYSTGRVQNGEELLEDIEER 1095



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 114/524 (21%), Positives = 212/524 (40%), Gaps = 107/524 (20%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
            S  ++++S   RG    A +++++++  G+ P++ TY  LL  L            MS +
Sbjct: 577  SFNRIIDSYCHRGNIVGAFSVYDDMVRYGYSPNVCTYQNLLRGLCQGGHLVQARQFMSCL 636

Query: 134  EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +     D   FNA++      G ++EA+D   KM ++   P   TY  L+ G+   GK 
Sbjct: 637  LDIPFAIDEKTFNALLLGICRYGTLDEALDLCEKMIKNNCLPDIHTYTILLSGFCRKGKI 696

Query: 194  EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYN 252
              ++ +L +M  +G V P+   Y  L+    NE  +  A  V H++    G+  D + YN
Sbjct: 697  LPALVILQMMLEKG-VVPDTVAYTCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYN 755

Query: 253  TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            ++   Y ++   +  + ++ +M  N V PN  +  I++ GY K G+  ++L   + M   
Sbjct: 756  SLMNGYLKSRNVNTIKRMMSDMYQNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRK 815

Query: 313  GVHPNLVIFNLLIKG------------FVEIMDRDGVD---------------------- 338
            G+ P+ V + LLI G            F+E M  +G+                       
Sbjct: 816  GIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNA 875

Query: 339  -EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY------ 391
             +V   MK   ++P   T+S ++N     G++D   ++  +M + G++P+   Y      
Sbjct: 876  LQVFNCMKWLHMSPSSKTFSAMINGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNA 935

Query: 392  -----------------------------SILAKGYVREQEPEKAEELLMTMIESGFHPN 422
                                         S + +G  R  + E+A  +  +M+ SG  P 
Sbjct: 936  KCRVGEIDRAFRLKEEMKAIGIVPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPT 995

Query: 423  VVIFTTI-----------------------------------ISGWCSDGSMDRAIEVFD 447
            V  FTT+                                   I+G C D  +  A++++ 
Sbjct: 996  VATFTTLMHSLCKESKIADALHLKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYG 1055

Query: 448  KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            +M   G+ PN+ T+ TL        +    EE+L+ ++  G+ P
Sbjct: 1056 EMKSKGLWPNITTYITLTGAMYSTGRVQNGEELLEDIEERGLIP 1099



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 94/390 (24%), Positives = 179/390 (45%), Gaps = 2/390 (0%)

Query: 76   TKLMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
            T L+N LI  G+ + A  +F+ +I + G     + Y +L+      +  N+I  +MS + 
Sbjct: 719  TCLLNGLINEGQVKAASYVFHEIICKEGLYADCIAYNSLMNGYLKSRNVNTIKRMMSDMY 778

Query: 135  ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
            +N + P+S  +N +++ + + G   +++  +  M   G+ P   TY  LI G    G  +
Sbjct: 779  QNEVYPNSASYNILMHGYVKRGQFSKSLYLYKYMVRKGIRPDNVTYRLLILGLSECGLID 838

Query: 195  ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
             +VK L+ M  EG + P+   +++L+ A+  +  +  A  V + M    M P   T++ +
Sbjct: 839  IAVKFLEKMVLEG-IFPDRLVFDILITAFSEKSKMHNALQVFNCMKWLHMSPSSKTFSAM 897

Query: 255  ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                 + G  D + +V+ EM   G+QPN      +++  C+ G+I  A R    MK  G+
Sbjct: 898  INGLIRKGYLDHSHKVLHEMLQVGLQPNHTHYIALVNAKCRVGEIDRAFRLKEEMKAIGI 957

Query: 315  HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
             P  V  + +I+G       +    V + M    + P V T++T+M++      +     
Sbjct: 958  VPAEVAESSIIRGLCRCGKLEEAVIVFSSMMRSGMVPTVATFTTLMHSLCKESKIADALH 1017

Query: 375  IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
            +   M    ++ D  +Y++L  G  +++    A +L   M   G  PN+  + T+     
Sbjct: 1018 LKRLMELCRLRVDVVSYNVLITGLCKDKHISDALDLYGEMKSKGLWPNITTYITLTGAMY 1077

Query: 435  SDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
            S G +    E+ + + E G+ P  K  E L
Sbjct: 1078 STGRVQNGEELLEDIEERGLIPAYKQPENL 1107



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/408 (21%), Positives = 178/408 (43%), Gaps = 21/408 (5%)

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT------------- 177
           S VE +G+D  +  +   +    ++    +AM     +  +G + T              
Sbjct: 93  SIVERSGLDRITYVYCMAVPILIQAQMHSQAMSVLKHLAVTGFSCTAIFTSLLRTISRFD 152

Query: 178 ----STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
                 +  L+K Y    K  ++   +  M   G  K +  + N ++ A   E      W
Sbjct: 153 PTNHVVFELLVKAYVKERKVLDAAVAVLFMDDCG-FKASPVSCNTILNALVEEGESKHVW 211

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
             + +  A      V T N +  +   NGE  +AE+++ +M+   +  N  T   I+  Y
Sbjct: 212 LFLRESLARKFPLGVTTCNILLNSLCTNGEFRKAEDMLQKMKSCHIS-NSVTYNTILHWY 270

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
            K+G+ K AL     M+   V  ++  +N++I     I        +L  M++  + PD 
Sbjct: 271 VKKGRFKAALCVLEDMERDSVQADVYTYNIMIDKLCRIKRSTRAFLLLKRMRKDDLTPDE 330

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
            TY+T++N +   G ++  + +F+ M +  + P    Y+ +  GY R +  +KA  +L  
Sbjct: 331 CTYNTLINGFFREGKINHARYVFNHMLRQNLVPSVATYTTMIDGYCRNRRIDKALSILSE 390

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW-GYSEAR 472
           M  +G  P+ + ++ +++G+C    +  AI + + +   G++ N KT  T++  G+ +  
Sbjct: 391 MQITGVMPSELTYSALLNGYCKVSMLGPAIYLMEDLKSRGITIN-KTMRTILIDGFCQVG 449

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  +A++IL+ M   G+ P   T+  L           E K ILS+++
Sbjct: 450 EISKAKQILKSMFEDGIDPDVITYSALINGMCRMAKMHETKEILSRMQ 497


>gi|356560499|ref|XP_003548529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Glycine max]
          Length = 836

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/511 (24%), Positives = 239/511 (46%), Gaps = 42/511 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++ L + G+ +EA    + ++     PS+VTY  L++ L   + F   + ++ 
Sbjct: 290 VVTYNNVIDGLFKSGRFEEALRFKDRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLV 349

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  P+ + FNA+I+ +   G+M EA+    +M   G+ P   T+NTL++G+  + 
Sbjct: 350 EMYSMGFAPNEVVFNALIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSN 409

Query: 192 KPEESVKLL--------------------DLMSREGNVKP----------NLRTYNVL-- 219
           + E++ ++L                     LM R G V            N+R  + L  
Sbjct: 410 QMEQAEQVLVYILSSGLSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLT 469

Query: 220 --VRAWCNEKNITEAWNVMHKMAA-SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
             V   C  +  +EA  +  K+AA  G+  + VT N +     + G  ++  EV+ +M  
Sbjct: 470 PLVVGLCKCEGHSEAIELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLE 529

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G+  +  +   +I G CK GKI+EA +    M +    P+   +N L+KG  ++   D 
Sbjct: 530 KGLLLDRISYNTLIFGCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDD 589

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
           V  +L   KE+   P+V TY+ ++  +  A  ++   + F ++    ++  +  Y+IL  
Sbjct: 590 VHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIA 649

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
            Y R     +A +L   M   G  P    ++++I G C  G +D A E+F++M   G+ P
Sbjct: 650 AYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLP 709

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N+  +  L+ G+ +  Q      IL  M + G+ P K T+ ++ +     G  KEA+ +L
Sbjct: 710 NVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELL 769

Query: 517 SK-IKNKERTNEMEAEEDIPVESLERLYHKE 546
           ++ I+N        A + +   +L++ Y KE
Sbjct: 770 NEMIRNG------IAPDTVTYNALQKGYCKE 794



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/432 (25%), Positives = 200/432 (46%), Gaps = 37/432 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++    +G   EA  + + +   G KP+ VT+ TLL       +      ++  +  +G
Sbjct: 366 LIDGYCRKGDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSG 425

Query: 138 MDPDSIFFNAVINAFSE---------------SGNME--------------------EAM 162
           +  +    + VI+   E               SGN+                     EA+
Sbjct: 426 LSVNMDVCSYVIHRLMERSGFVSALKIVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAI 485

Query: 163 DTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           + ++K+    GL   T T N L+ G    G  EE  ++L  M  +G +   + +YN L+ 
Sbjct: 486 ELWFKLAAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRI-SYNTLIF 544

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C    I EA+ +  +M     +PD  TYN +    A  G+ D    ++ E +  G  P
Sbjct: 545 GCCKWGKIEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAKEYGFVP 604

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           N  T  +++ GYCK  +I++A++F + +    V  + V++N+LI  +  I +     ++ 
Sbjct: 605 NVYTYALLLEGYCKADRIEDAVKFFKNLDYEKVELSSVVYNILIAAYCRIGNVTEAFKLR 664

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             MK   + P   TYS++++     G +D+ KEIF++M   G+ P+   Y+ L  G+ + 
Sbjct: 665 DAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKL 724

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
            + +    +L+ M  +G  PN + +T +I G+C  G+M  A E+ ++M  +G++P+  T+
Sbjct: 725 GQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTY 784

Query: 462 ETLMWGYSEARQ 473
             L  GY + R+
Sbjct: 785 NALQKGYCKERE 796



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 128/527 (24%), Positives = 215/527 (40%), Gaps = 55/527 (10%)

Query: 39  PGEKKQLYSNSKPTDSQPQTHCSFCMNKESCR---TVRSMTKLMNSLIERGKPQEAQAIF 95
           P    +L+ +   T +   TH  F      C    TVRS   L+ SL+       A+ + 
Sbjct: 82  PHHFDRLFLSLHRTVNPKTTHEFFRFATRHCNFRFTVRSYCLLLRSLLADSFVPRARFLL 141

Query: 96  NNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV----EENGMDPDSIFFNAVINA 151
             LI+G H P+  + TT     +   R   I S M ++    +E  +    +  + + + 
Sbjct: 142 ARLIDG-HVPTWSSKTTT----SFHDRLREIASSMLELNQGSDEQRLGELDLLLHILCSQ 196

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP 211
           F   G+   A D F    + G+ P   T N L+     A +  +S ++ DL  +   V P
Sbjct: 197 FKCLGS-RCAFDIFVMFSKRGVFPCLKTCNLLLSSLVKANELHKSYEVFDLACQ--GVAP 253

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE-------- 263
           ++ T+   + A+C    + +A ++  KM   G+ P+VVTYN +     ++G         
Sbjct: 254 DVFTFTTAINAFCKGGRVGDAVDLFCKMEGLGVFPNVVTYNNVIDGLFKSGRFEEALRFK 313

Query: 264 ---------------------------ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
                                       ++A EV+VEM   G  PN      +I GYC++
Sbjct: 314 DRMVRSKVNPSVVTYGVLISGLMKLEMFEEANEVLVEMYSMGFAPNEVVFNALIDGYCRK 373

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA--LMKEFRVNPDVI 354
           G + EALR    M   G+ PN V FN L++GF      +  ++VL   L     VN DV 
Sbjct: 374 GDMGEALRVRDEMAMKGMKPNFVTFNTLLQGFCRSNQMEQAEQVLVYILSSGLSVNMDVC 433

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           +Y  I      +GF+   K I   +    I+      + L  G  + +   +A EL   +
Sbjct: 434 SY-VIHRLMERSGFVSALK-IVTKLLSGNIRVSDSLLTPLVVGLCKCEGHSEAIELWFKL 491

Query: 415 IE-SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
               G   N V    ++ G C  G+M+   EV  +M E G+  +  ++ TL++G  +  +
Sbjct: 492 AAVKGLAANTVTSNALLHGLCERGNMEEVFEVLKQMLEKGLLLDRISYNTLIFGCCKWGK 551

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
              A ++ + M      P   T+  L +     G   +  R+L + K
Sbjct: 552 IEEAFKLKEEMVQQEFQPDTYTYNFLMKGLADMGKIDDVHRLLHEAK 598



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 113/227 (49%), Gaps = 1/227 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LM  L + GK  +   + +   E G  P++ TY  LL       R          ++   
Sbjct: 577 LMKGLADMGKIDDVHRLLHEAKEYGFVPNVYTYALLLEGYCKADRIEDAVKFFKNLDYEK 636

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++  S+ +N +I A+   GN+ EA      MK  G+ PT +TY++LI G    G+ +E+ 
Sbjct: 637 VELSSVVYNILIAAYCRIGNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAK 696

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++ + M  EG + PN+  Y  L+   C    +    +++ +M+++G++P+ +TY  +   
Sbjct: 697 EIFEEMRNEG-LLPNVFCYTALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDG 755

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           Y + G   +A E++ EM  NG+ P+  T   +  GYCKE ++   L+
Sbjct: 756 YCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGYCKERELTVTLQ 802



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 45/169 (26%), Positives = 79/169 (46%), Gaps = 1/169 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   EA  + + +   G  P+  TY++L+  +    R +    I  ++   G+ P+   +
Sbjct: 655 GNVTEAFKLRDAMKSRGILPTCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCY 714

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
            A+I    + G M+       +M  +G+ P   TY  +I GY   G  +E+ +LL+ M R
Sbjct: 715 TALIGGHCKLGQMDIVGSILLEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIR 774

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            G + P+  TYN L + +C E+ +T      HK        + +TYNT+
Sbjct: 775 NG-IAPDTVTYNALQKGYCKERELTVTLQSDHKSNIGLPLEEEITYNTL 822



 Score = 68.9 bits (167), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 64/117 (54%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  + + L++ +   G+  EA+ IF  +   G  P++  YT L+       + + + SI+
Sbjct: 675 TCATYSSLIHGMCCIGRVDEAKEIFEEMRNEGLLPNVFCYTALIGGHCKLGQMDIVGSIL 734

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
            ++  NG+ P+ I +  +I+ + + GNM+EA +   +M  +G+ P T TYN L KGY
Sbjct: 735 LEMSSNGIRPNKITYTIMIDGYCKLGNMKEARELLNEMIRNGIAPDTVTYNALQKGY 791


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 211/431 (48%), Gaps = 17/431 (3%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K  +A  +F  ++ G   P+  TY  L+       + +   S+ S ++ +G+ P++   N
Sbjct: 5   KHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMN 64

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            ++    E G M  A+  F +M+     PT++++N L++G+ +AG+  E  K +    + 
Sbjct: 65  TLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRAIEFFKEM----KA 120

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
             V+P+L +Y++L+ A  +   + EA  +   M  S   PD++TYN +   Y + G+  +
Sbjct: 121 SGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYE 177

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A+ ++ E+   G +PN  T  III+ YCK  K++EA      M E    PN V FN LI 
Sbjct: 178 AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIA 237

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA-GFMDKCKEIFDDMGKAGIK 385
           GF +    +   ++ A M++      ++TY+T++++     G +    ++F+ +  AG+ 
Sbjct: 238 GFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLT 297

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P    Y+ L +G+   +       LL  M   G  P+V+ +  +ISG CS   ++ A  +
Sbjct: 298 PTIVTYNSLIQGF--SERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRL 355

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           F+ M     +PN+ TF  L+ G    ++   A  IL  M A    P  +TF  +  A   
Sbjct: 356 FNGM---ACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAFCK 408

Query: 506 TGLTKEAKRIL 516
            G   +A+ ++
Sbjct: 409 AGAMHDAREVM 419



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 197/400 (49%), Gaps = 17/400 (4%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +M  L+  L E G+   A  +F  +  G   P+  ++  LL    +  R         ++
Sbjct: 62  TMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEM 118

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + +G++PD   ++ +++A S+SG M EA   F  M  S   P   TYN L+ GY   G+ 
Sbjct: 119 KASGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQT 175

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+  L+  + + G  +PN+ TY++++  +C    + EAW V  KM  S   P+ VT+NT
Sbjct: 176 YEAQSLMKEILKAG-YEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNT 234

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE-GKIKEALRFARTMKEY 312
           +   + + G  + A ++  EME  G +    T   +I   CK+ G +  A+     ++  
Sbjct: 235 LIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGA 294

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ P +V +N LI+GF E  + DG+  +L  M      PDVITY+ +++   +A  ++  
Sbjct: 295 GLTPTIVTYNSLIQGFSERAN-DGL-RLLCHMHAEGCKPDVITYNCLISGLCSANRVEDA 352

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           + +F+ M  A   P+   ++ L +G   +++ E+A  +L  M      P++  F TII  
Sbjct: 353 QRLFNGMACA---PNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIILA 405

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
           +C  G+M  A EV   M +HG  PN  T   L  G   ++
Sbjct: 406 FCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQSSK 445



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/385 (24%), Positives = 167/385 (43%), Gaps = 72/385 (18%)

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G   PN  TYNVL+R +C    + +A +V   M +SG+ P+  T NT+     + G+   
Sbjct: 19  GLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSS 78

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A ++  EM+     P   +  I++ G+   G+   A+ F + MK  GV P+L  +++L+ 
Sbjct: 79  ALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLS 135

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
               + D   + E  AL      +PD++TY+ +M+ +   G   + + +  ++ KAG +P
Sbjct: 136 A---LSDSGRMAEAHALFSAMTCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEP 192

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           +   YSI+   Y +  + E+A E+ M MIES   PN V F T+I+G+C  G ++ AI++F
Sbjct: 193 NVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLF 252

Query: 447 -------------------DKMCEH-----------------GVSPNLKTFETLMWGYSE 470
                              D +C+                  G++P + T+ +L+ G+SE
Sbjct: 253 AEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFSE 312

Query: 471 ARQPW------------------------------RAEEILQIMKAFGVHPQKSTFLLLA 500
                                              R E+  ++       P  +TF  L 
Sbjct: 313 RANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMACAPNVTTFNFLI 372

Query: 501 EARRATGLTKEAKRILSKIKNKERT 525
               A    +EA+ IL ++   + T
Sbjct: 373 RGLCAQKKVEEARNILDRMTAPDMT 397



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 62/259 (23%), Positives = 116/259 (44%), Gaps = 12/259 (4%)

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           DQA  +  E+      PN  T  ++I G+CK G++ +A+     MK  G+ PN    N L
Sbjct: 7   DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVIT---YSTIMNAWSTAGFMDKCKEIFDDMGK 381
           + G  EI     +   L L +E +  P + T   ++ ++  +  AG   +  E F +M  
Sbjct: 67  LLGLCEI---GQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAG---RAIEFFKEMKA 120

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
           +G++PD  +Y IL           +A  L   M  S   P+++ +  ++ G+C  G    
Sbjct: 121 SGVEPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYE 177

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A  +  ++ + G  PN+ T+  ++  Y +  +   A E+   M      P   TF  L  
Sbjct: 178 AQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIA 237

Query: 502 ARRATGLTKEAKRILSKIK 520
                G+ ++A ++ ++++
Sbjct: 238 GFCKAGMLEDAIKLFAEME 256


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 103/396 (26%), Positives = 192/396 (48%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           RS   L+    + G+ +EA A+   +   G      T T ++ A   Q RF  +  +  +
Sbjct: 182 RSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDVPGLFGR 241

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + E G  P+ + + A ++   + G +++A     +M   GL P   T+ +LI G    G 
Sbjct: 242 MVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGW 301

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            E + +L   + +  + KPN+ TY V++  +C E  +  A  ++ +M   G+ P+  TY 
Sbjct: 302 TERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYT 361

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+   + + G  D+A E++ +M+  G  PN  T   II G+CK+GKI++A +  R     
Sbjct: 362 TLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQ 421

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ P+ V + +LI    +        ++   M E   +PD+ TY+TI+  +     M++ 
Sbjct: 422 GLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQS 481

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           +++FD     G+ P    Y+ +  GY R  +   A ++   M++ G  P+ + +  +ISG
Sbjct: 482 QQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISG 541

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            C +  ++ A  +F+ M +  + P   T  TL + Y
Sbjct: 542 LCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEY 577



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/420 (24%), Positives = 191/420 (45%), Gaps = 5/420 (1%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           L +R     A+  F+ +   G +P   ++  L+     + RF    ++++ +   G   D
Sbjct: 159 LRQRHHFAHARQAFDGM---GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLD 215

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           S     V+ AF   G   +    F +M E G  P    Y   + G    G  +++  +L+
Sbjct: 216 SATCTVVVRAFCRQGRFRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLE 275

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA-ASGMKPDVVTYNTIATAYAQ 260
            M  +G +KPN+ T+  L+   C       A+ +  K+  +S  KP+V TY  +   Y +
Sbjct: 276 EMVGKG-LKPNVYTHTSLIDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCK 334

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
            G+  +AE ++  M   G+ PN  T   +I G+C+ G    A      MK  G  PN+  
Sbjct: 335 EGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYT 394

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           +N +I GF +        +VL +     + PD +TY+ ++      G +    ++F+ M 
Sbjct: 395 YNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMA 454

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
           +    PD   Y+ +   Y ++++ E++++L    +  G  P    +T++I+G+C  G   
Sbjct: 455 ENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKST 514

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            A++VF++M +HG  P+  T+  L+ G  +  +   A  + + M    + P   T + LA
Sbjct: 515 SALKVFERMVQHGCLPDPITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLA 574



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/341 (24%), Positives = 159/341 (46%), Gaps = 2/341 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIM 130
           V + T  ++ L +RG  ++A  +   ++  G KP++ T+T+L+  L  I     +    +
Sbjct: 251 VVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKIGWTERAFRLFL 310

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             V+ +   P+   +  +I  + + G +  A     +M E GL P T+TY TLI G+   
Sbjct: 311 KLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNTYTTLIDGHCRG 370

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  + + +L++ M  EG + PN+ TYN ++  +C +  I +A+ V+    + G+ PD VT
Sbjct: 371 GSFDRAFELMNKMKLEGFL-PNIYTYNAIIGGFCKKGKIQQAYKVLRMATSQGLCPDKVT 429

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  + T + + G    A ++  +M  N   P+  T   II+ YC++ +++++ +      
Sbjct: 430 YTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQRQMEQSQQLFDKCL 489

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P    +  +I G+  +       +V   M +    PD ITY  +++       ++
Sbjct: 490 SIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLCKESRLE 549

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           + + +F+ M    + P       LA  Y R  +   A   L
Sbjct: 550 EARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFL 590



 Score = 48.1 bits (113), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 41/176 (23%), Positives = 72/176 (40%), Gaps = 5/176 (2%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +F+  +  G  P+  TYT+++A      +  S   +  ++ ++G  PD I + A+I+   
Sbjct: 484 LFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITYGALISGLC 543

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           +   +EEA   F  M +  + P   T  TL   Y    K   +V  LD + +    +   
Sbjct: 544 KESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDGLDK----RQQA 599

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT-IATAYAQNGEADQAE 268
              + LVR      N+  A   +  +       D  TY + I + Y  N  A  +E
Sbjct: 600 HAADALVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALASE 655


>gi|224107129|ref|XP_002314384.1| predicted protein [Populus trichocarpa]
 gi|222863424|gb|EEF00555.1| predicted protein [Populus trichocarpa]
          Length = 764

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/440 (24%), Positives = 210/440 (47%), Gaps = 2/440 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK   A   F+ +   G  P  VTYT+++  L    R +    I  Q+E+N   P +  +
Sbjct: 145 GKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIFEQMEQNRQVPCAYAY 204

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +I  +  +G  +EA     + +  G  P+   YN ++   G  GK ++++++ + M R
Sbjct: 205 NTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKKGKTDKALRIFEEMKR 264

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +    PNL TYN+++   C   N+  A+ V   M  +G+ P+V T N +     +  + D
Sbjct: 265 DA--MPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKLD 322

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  +   M++    P+G T   +I G  K+G++ +A R    M +    PN+V++  LI
Sbjct: 323 EACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSLI 382

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           + F +   ++   ++   M     +PD++  +T M+    AG  +K + +F+++   G  
Sbjct: 383 RNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARGFL 442

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD  +YSIL    V+     +  EL   M + G   +   + T+I G+C  G +++A ++
Sbjct: 443 PDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 502

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
            ++M   G  P + T+ +++ G ++  +   A  + +  K+ G+   +  +  L +    
Sbjct: 503 LEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSNGIELNQVIYSSLIDGFGK 562

Query: 506 TGLTKEAKRILSKIKNKERT 525
            G   EA  ++ ++  K  T
Sbjct: 563 VGRVDEAYLVMEEMMQKGLT 582



 Score =  149 bits (376), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 94/462 (20%), Positives = 212/462 (45%), Gaps = 7/462 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M +++   + +   ++  L + G  + A  + + + E G  P++ T   ++  L   ++ 
Sbjct: 262 MKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTINIMIDRLCKAQKL 321

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +   SI   ++     PD   F ++I+   + G +++A   + +M ++   P    Y +L
Sbjct: 322 DEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDADQIPNVVVYTSL 381

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I+ +    + E+  K+   M R G   P+L   N  +          +   +  ++ A G
Sbjct: 382 IRNFFKCDRKEDGHKMYKEMMRSG-CSPDLMLLNTYMDCVFKAGETEKGRALFEEIKARG 440

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             PD  +Y+ +  +  + G A +  E+   M+  G   + R    +I G+CK GK+ +A 
Sbjct: 441 FLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDGFCKSGKVNKAY 500

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP---DVITYSTIM 360
           +    MK  G HP +V +  ++ G  +I   D +DE   L +E + N    + + YS+++
Sbjct: 501 QLLEEMKTMGHHPTVVTYGSVVDGLAKI---DRLDEAYMLFEEAKSNGIELNQVIYSSLI 557

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           + +   G +D+   + ++M + G+ P+ + ++ L  G V+ +E  +A     +M +    
Sbjct: 558 DGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEEINEALVCFQSMKDLKCT 617

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN + +  +I+G C     ++A   + +M + G+ PN  T+  ++ G +++    +A  +
Sbjct: 618 PNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTAMISGLAKSGNVAQASSL 677

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            +  +A G  P  +++  + E         +A ++  + + K
Sbjct: 678 FERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLK 719



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 102/434 (23%), Positives = 201/434 (46%), Gaps = 9/434 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           VR++  +++ L +  K  EA +IF  +      P   T+ +L+  L  Q R +  + I  
Sbjct: 305 VRTINIMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYE 364

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +    P+ + + ++I  F +    E+    + +M  SG +P     NT +     AG
Sbjct: 365 RMLDADQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAG 424

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E+   L + +   G + P+ R+Y++L+ +        E + + + M   G   D   Y
Sbjct: 425 ETEKGRALFEEIKARGFL-PDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAY 483

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   + ++G+ ++A +++ EM+  G  P   T G ++ G  K  ++ EA       K 
Sbjct: 484 NTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKS 543

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            G+  N VI++ LI GF ++     VDE   +M+E     + P+V T++ +++    A  
Sbjct: 544 NGIELNQVIYSSLIDGFGKV---GRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVKAEE 600

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +++    F  M      P+   Y IL  G  + ++  KA      M + G  PN + +T 
Sbjct: 601 INEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTA 660

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ--IMKA 486
           +ISG    G++ +A  +F++    G  P+  ++  ++ G S A +   A ++ +   +K 
Sbjct: 661 MISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEETRLKG 720

Query: 487 FGVHPQKSTFLLLA 500
             +H +    LL A
Sbjct: 721 CSIHTKTCVALLDA 734



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 115/537 (21%), Positives = 215/537 (40%), Gaps = 45/537 (8%)

Query: 92  QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINA 151
           + I   +   G  P+  T   L+A+    ++      ++  +      P    +  +I A
Sbjct: 11  EQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTLIGA 70

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP 211
            SE G  +  +  F +M+E G         TLI+ +   G+ + ++ LLD M +      
Sbjct: 71  LSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEM-KSNTFDA 129

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           ++  YNV +  +     +  AW   H+M A+G+ PD VTY ++     +    D+A E+ 
Sbjct: 130 DIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVEIF 189

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI-----K 326
            +ME N   P       +I GY   GK  EA       +  G  P++V +N ++     K
Sbjct: 190 EQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLGKK 249

Query: 327 G-------FVEIMDRDGVD----------------------EVLALMKEFRVNPDVITYS 357
           G         E M RD +                       +V   MKE  + P+V T +
Sbjct: 250 GKTDKALRIFEEMKRDAMPNLPTYNIIIGMLCKAGNVEAAFKVRDAMKEAGLFPNVRTIN 309

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++    A  +D+   IF+ M      PD   +  L  G  ++   + A  +   M+++
Sbjct: 310 IMIDRLCKAQKLDEACSIFEGMDYKVCSPDGATFCSLIDGLGKQGRVDDAYRIYERMLDA 369

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
              PNVV++T++I  +      +   +++ +M   G SP+L    T M    +A +  + 
Sbjct: 370 DQIPNVVVYTSLIRNFFKCDRKEDGHKMYKEMMRSGCSPDLMLLNTYMDCVFKAGETEKG 429

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDI--- 534
             + + +KA G  P   ++ +L  +    G  +E   +   +K++    +  A   +   
Sbjct: 430 RALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCVLDTRAYNTVIDG 489

Query: 535 -----PVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSS 586
                 V    +L  +  T   +P ++   +VV  D       L +  ML  +A S+
Sbjct: 490 FCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVV--DGLAKIDRLDEAYMLFEEAKSN 544



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/262 (22%), Positives = 114/262 (43%)

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           D  E+++ EM   G  P   TC  +++   K  K+ EA    + M+ +   P    +  L
Sbjct: 8   DYLEQILGEMSIAGFGPTNYTCVELVASCVKSRKLIEAFDLLQMMRHFKFRPAFSAYTTL 67

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I    E+ + D +  +   M+E     +V   +T++  +S  G +D    + D+M     
Sbjct: 68  IGALSEVGESDRMLALFNQMQELGYEVNVHLLTTLIRVFSREGRVDAALSLLDEMKSNTF 127

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
             D   Y++    + +  + + A +    M  +G  P+ V +T+++   C    +D A+E
Sbjct: 128 DADIVLYNVCIDCFGKVGKVDMAWKFFHEMKANGLVPDDVTYTSMMGVLCKANRLDEAVE 187

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           +F++M ++   P    + T++ GY  A +   A  +L+  +A G  P    +  +     
Sbjct: 188 IFEQMEQNRQVPCAYAYNTMIMGYGSAGKFDEAYSLLERQRAKGCIPSVVAYNCILTCLG 247

Query: 505 ATGLTKEAKRILSKIKNKERTN 526
             G T +A RI  ++K     N
Sbjct: 248 KKGKTDKALRIFEEMKRDAMPN 269



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/337 (19%), Positives = 142/337 (42%), Gaps = 40/337 (11%)

Query: 14  DDKYQSGSTIVKKGWGQMIPAKKNNPGEKKQ---LYSNSKPTDSQPQTHCSFCMNKESC- 69
           D  +++G T   +   + I A+   P  +     ++S  K   ++      + M  + C 
Sbjct: 418 DCVFKAGETEKGRALFEEIKARGFLPDTRSYSILIHSLVKAGFARETYELYYAMKDQGCV 477

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
              R+   +++   + GK  +A  +   +   GH P++VTY +++  L    R +  + +
Sbjct: 478 LDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTMGHHPTVVTYGSVVDGLAKIDRLDEAYML 537

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             + + NG++ + + ++++I+ F + G ++EA     +M + GLTP   T+N L+ G   
Sbjct: 538 FEEAKSNGIELNQVIYSSLIDGFGKVGRVDEAYLVMEEMMQKGLTPNVYTWNCLLDGLVK 597

Query: 190 AGKPEESV----KLLDL-------------------------------MSREGNVKPNLR 214
           A +  E++     + DL                               M ++G +KPN  
Sbjct: 598 AEEINEALVCFQSMKDLKCTPNQITYCILINGLCKVRKFNKAFVFWQEMQKQG-LKPNTI 656

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TY  ++       N+ +A ++  +  ASG  PD  +YN +    +    A  A ++  E 
Sbjct: 657 TYTAMISGLAKSGNVAQASSLFERFRASGGIPDSASYNAMIEGLSIANRALDAYQLFEET 716

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
              G   + +TC  ++    K   +++A      ++E
Sbjct: 717 RLKGCSIHTKTCVALLDALHKAECLEQAAIVGAVLRE 753


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/481 (24%), Positives = 225/481 (46%), Gaps = 37/481 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++++ + LM +L  RG  ++   +   +   G +P++ TYT  + AL   +R +    I 
Sbjct: 234 SMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIF 293

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++++ G  PD I +  +I+A   +G +++A + + KM+ S  +P   TY TL+  +G  
Sbjct: 294 KEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKV 353

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  E   +  + M  +G   P++ TY +L+ A C   ++  A++++  M   G+ P++ T
Sbjct: 354 GDLETVKRFWNEMEVDG-YAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHT 412

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNT+     +    D+A E++  ME  GV+P   +  + I  Y K G   +A+    TMK
Sbjct: 413 YNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMK 472

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           + G+ P++   N  +    E       +++   + +  ++PD +TY+ +M  +S AG +D
Sbjct: 473 KRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQID 532

Query: 371 KCKEIFDDMGKAGIKPDAH-----------------------------------AYSILA 395
           K  ++  +M   G +PD                                      Y+IL 
Sbjct: 533 KATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILL 592

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G  +E +  KA EL  +M ESG  PN + F +++     + ++D A+++F +M     +
Sbjct: 593 TGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCN 652

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P++ T+ T+++G     +   A      MK F + P   T   L       G  ++A ++
Sbjct: 653 PDVLTYNTIIYGLIREGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKV 711

Query: 516 L 516
           +
Sbjct: 712 V 712



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 218/452 (48%), Gaps = 2/452 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
            T  +   ++  L E+ + ++   +F+ + +     +L TY T+  AL+I+         
Sbjct: 129 HTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFA 188

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++ E G   ++  +N +I+     G   EA+  + +M   G+ P+  TY+ L+   G 
Sbjct: 189 LRKMTEVGFILNAYSYNGLIHLLL-PGFCNEALKVYKRMISEGMKPSMKTYSALMVALGR 247

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G   + + LL+ M   G ++PN+ TY + +RA    + I +AW +  +M   G  PDV+
Sbjct: 248 RGDTRKIMNLLEEMKSIG-LRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVI 306

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +  A    G+ D+A+E+ V+M  +   P+  T   ++  + K G ++   RF   M
Sbjct: 307 TYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEM 366

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +  G  P++V + +LI+   +  D D   ++L +M    + P++ TY+T++     A  +
Sbjct: 367 EVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRL 426

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           D+  E+ ++M   G+KP A +Y +    Y +  +P KA +   TM + G  P++      
Sbjct: 427 DEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNAS 486

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           +      G +  A ++F+ + + G+SP+  T+  LM  YS+A Q  +A ++L  M + G 
Sbjct: 487 LYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGC 546

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            P       L       G    A ++  ++KN
Sbjct: 547 EPDVMIINSLINTLYKAGRVDAAWKMFGRLKN 578



 Score =  172 bits (435), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/513 (23%), Positives = 225/513 (43%), Gaps = 72/513 (14%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           + +L E G+  EA+ IFN+L + G  P  VTY  L+   +   + +    ++S++   G 
Sbjct: 487 LYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGC 546

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
           +PD +  N++IN   ++G ++ A   F ++K   L PT  TYN L+ G G  GK  ++++
Sbjct: 547 EPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALE 606

Query: 199 LLDLMSREG----------------------------------NVKPNLRTYNVLVRAWC 224
           L   M+  G                                  N  P++ TYN ++    
Sbjct: 607 LFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLI 666

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG-VQPNG 283
            E  I  A+   H+M    + PD VT  T+     ++G  + A +V++E  H   +Q N 
Sbjct: 667 REGRIDYAFWFFHQMKKF-LSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNS 725

Query: 284 RTCGIIISGYCKEGKIKEALRFARTM---------------------------------- 309
           +  G ++     E +I+EA+ FA  +                                  
Sbjct: 726 QFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDK 785

Query: 310 --KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
             K  G+HP L  +N L+ G +     +   E+   MK    +P+  TY+ +++A   + 
Sbjct: 786 FTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSK 845

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            ++K  +++ +M   G +P+A  ++I+    V+     KA +L   ++   F P    + 
Sbjct: 846 RINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYG 905

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +I G    G  ++A+++F++M ++G  PN   +  L+ G+ ++ +   A E+ + M   
Sbjct: 906 PLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKE 965

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           G+ P   ++ +L E    TG   EA +   ++K
Sbjct: 966 GIRPDLKSYTILVECLCITGRIDEAVQYFEELK 998



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 200/415 (48%), Gaps = 1/415 (0%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           L+  G   EA  ++  +I  G KPS+ TY+ L+ AL  +     I +++ +++  G+ P+
Sbjct: 210 LLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPN 269

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
              +   I A   +  +++A   F +M + G  P   TY  LI     AGK +++ +L  
Sbjct: 270 IYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYV 329

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M R  +  P+  TY  L+  +    ++       ++M   G  PDVVTY  +  A  ++
Sbjct: 330 KM-RASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKS 388

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
           G+ D+A +++  M   G+ PN  T   +I G  K  ++ EAL     M+  GV P    +
Sbjct: 389 GDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSY 448

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
            L I  + +  D     +    MK+  + P +   +  +   +  G + + ++IF+D+ K
Sbjct: 449 VLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHK 508

Query: 382 AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
            G+ PD+  Y++L K Y +  + +KA +LL  MI  G  P+V+I  ++I+     G +D 
Sbjct: 509 CGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDA 568

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           A ++F ++    ++P + T+  L+ G  +  +  +A E+   M   G  P   TF
Sbjct: 569 AWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITF 623



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 204/428 (47%), Gaps = 7/428 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+ E C   V + T L+++L   GK  +A+ ++  +    H P  VTY TL+        
Sbjct: 296 MDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGD 355

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
             ++    +++E +G  PD + +  +I A  +SG+++ A D    M   G+ P   TYNT
Sbjct: 356 LETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNT 415

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G   A + +E+++LL+ M   G VKP   +Y + +  +    +  +A +    M   
Sbjct: 416 MICGLLKARRLDEALELLENMESLG-VKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKR 474

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ P +   N      A+ G   +AE++  ++   G+ P+  T  +++  Y K G+I +A
Sbjct: 475 GIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKA 534

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
            +    M   G  P+++I N LI    +    D   ++   +K  ++ P V+TY+ ++  
Sbjct: 535 TQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTG 594

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G + K  E+F  M ++G  P+   ++ L     +    + A ++   M     +P+
Sbjct: 595 LGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPD 654

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           V+ + TII G   +G +D A   F +M +  +SP+  T  TL+ G     +  R E+ ++
Sbjct: 655 VLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPG---VVRHGRVEDAIK 710

Query: 483 IMKAFGVH 490
           ++  F VH
Sbjct: 711 VVMEF-VH 717



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 114/487 (23%), Positives = 220/487 (45%), Gaps = 41/487 (8%)

Query: 62   FC-MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
            FC M   +C   V +   ++  LI  G+   A   F+ + +    P  VT  TL+  +  
Sbjct: 643  FCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVR 701

Query: 120  QKRF-NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM---------------- 162
              R  ++I  +M  V +  +  +S F+  ++        +EEA+                
Sbjct: 702  HGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDH 761

Query: 163  -------------------DTFWKM-KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
                               + F K  K  G+ PT  +YN L+ G   +   E++++L + 
Sbjct: 762  VMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFED 821

Query: 203  MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
            M   G   PN  TYN+L+ A    K I + +++  +M + G +P+ +T+N I +A  ++ 
Sbjct: 822  MKSAGT-HPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSN 880

Query: 263  EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
              ++A ++  E+      P   T G +I G  K G+ ++A++    M +YG  PN VI+N
Sbjct: 881  NLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYN 940

Query: 323  LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
            +LI GF +  + D   E+   M +  + PD+ +Y+ ++      G +D+  + F+++   
Sbjct: 941  ILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLT 1000

Query: 383  GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
            G+ PD  +Y+ +  G  + +  ++A  L   M   G  P++  +  +I      G +D A
Sbjct: 1001 GLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVA 1060

Query: 443  IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            +++++++   G+ P++ T+  L+ G+S +    +A  + + M   G  P   TF  L   
Sbjct: 1061 VKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMMVVGCSPNTETFAQLPNK 1120

Query: 503  RRATGLT 509
                GL 
Sbjct: 1121 YPRAGLV 1127



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/410 (24%), Positives = 190/410 (46%), Gaps = 2/410 (0%)

Query: 113 LLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG 172
           +L  L  Q+R   +  +   +++  +  +   +  +  A S  G +  A     KM E G
Sbjct: 137 MLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAPFALRKMTEVG 196

Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA 232
                 +YN LI    + G   E++K+   M  EG +KP+++TY+ L+ A     +  + 
Sbjct: 197 FILNAYSYNGLIHLL-LPGFCNEALKVYKRMISEG-MKPSMKTYSALMVALGRRGDTRKI 254

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
            N++ +M + G++P++ TY     A  +    D A  +  EM+  G  P+  T  ++I  
Sbjct: 255 MNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDA 314

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPD 352
            C  GK+ +A      M+     P+ V +  L+  F ++ D + V      M+     PD
Sbjct: 315 LCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPD 374

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM 412
           V+TY+ ++ A   +G +D+  ++ D M   GI P+ H Y+ +  G ++ +  ++A ELL 
Sbjct: 375 VVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLE 434

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M   G  P    +   I  +   G   +AI+ F+ M + G+ P++      ++  +E  
Sbjct: 435 NMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETG 494

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +   AE+I   +   G+ P   T+ +L +     G   +A ++LS++ +K
Sbjct: 495 RISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISK 544



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 97/418 (23%), Positives = 184/418 (44%), Gaps = 60/418 (14%)

Query: 71   TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
            T+ S   LM+ L+     ++A  +F ++   G  P+  TY  LL A    KR N ++ + 
Sbjct: 795  TLESYNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLY 854

Query: 131  SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTY---------- 180
            S++   G +P++I  N +I+A  +S N+ +A+D ++++     +PT  TY          
Sbjct: 855  SEMRSRGCEPNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKA 914

Query: 181  -------------------------NTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
                                     N LI G+G +G+ + + +L   M +EG ++P+L++
Sbjct: 915  GRSEQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEG-IRPDLKS 973

Query: 216  YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
            Y +LV   C    I EA     ++  +G+ PD V+YN I     ++   D+A  +  EM+
Sbjct: 974  YTILVECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMK 1033

Query: 276  HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
            + G+ P+  T   +I      GK+  A++    ++  G+ P++  +N LI+G     ++D
Sbjct: 1034 NRGISPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKD 1093

Query: 336  GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF--------------------MDKCKEI 375
                V   M     +P+  T++ + N +  AG                     +++   I
Sbjct: 1094 QAFSVFKKMMVVGCSPNTETFAQLPNKYPRAGLVHNPFGAVFIGLFFIFTSIRLNQFYYI 1153

Query: 376  FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            F  +    I P  H  + + KGY+     E+ +  ++ M     + N   F  ++S W
Sbjct: 1154 FRFLFLVFINPCHHLLADVPKGYLALYVGEEMKRFVIPMP----YLNQASFQDLLSKW 1207


>gi|300681581|emb|CBI75525.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 204/443 (46%), Gaps = 36/443 (8%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           +EAQ + + +   G +P+  TY T L  L   K+  S  + +  + + G   +S  FNAV
Sbjct: 230 EEAQELLSEMEVEGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRGYPCNSYCFNAV 289

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
           I+ F   G + +A++ F  MK+ G  P   +Y+ L+ G    G       +L  M+R G 
Sbjct: 290 IHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNG- 348

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK----------------------- 245
           + PNL +Y+ L+   C    +  A+ +  ++   G K                       
Sbjct: 349 ITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICY 408

Query: 246 ------------PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
                       PD   Y+++  AY ++ +  +A EV   M  +G+ PN  TC I++ G+
Sbjct: 409 DLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGF 468

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
             EG I EA  F   ++++GV PNL  + ++I G  ++   + V  + A M +    PD 
Sbjct: 469 SNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDT 528

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           + YS I++ +  A  + +   ++  M   G KP+   Y+ L  G   + +  +   L   
Sbjct: 529 VLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKH 588

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           MI  G  P+ +++T++I+ +C   +M  A+E+F +M   G+S +   +  L+ G+S+   
Sbjct: 589 MIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLA 648

Query: 474 PWRAEEILQIMKAFGVHPQKSTF 496
              A+  ++ M   G+ P   T+
Sbjct: 649 MDGAQLFMEEMMNKGLTPTVVTY 671



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 114/473 (24%), Positives = 212/473 (44%), Gaps = 22/473 (4%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIE--GGHKPSLVTYTTLLAA-----LTIQKR 122
           R++R    LM S + R + +E + +  ++++  G   P L     +LA+     +T+ + 
Sbjct: 87  RSIRLFALLMRSFLPR-RIREVRCLIQSVVDHCGNAGPELFQLAPMLASNLGGSMTLPQV 145

Query: 123 FNSI-----------HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES 171
           + ++            ++++ VE   +  +    N ++    E   +      F  MK S
Sbjct: 146 YATVIRVFVELSMFEDALVTYVEAKKVGVELQVCNFLLKGLVEGNQIMYVRSLFDDMKIS 205

Query: 172 GLTPTTSTYNTLIKGYGIAGKP--EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
           G +P   +Y+ L+  Y    K   EE+ +LL  M  EG V+PN  TY   +   C  K +
Sbjct: 206 GPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEVEG-VRPNAATYGTYLYGLCRAKQV 264

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
             AWN +  +   G   +   +N +   +  +G+  +A EV   M+  G  P+  +  I+
Sbjct: 265 KSAWNFLQMLCQRGYPCNSYCFNAVIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSIL 324

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           + G CK+G +         M   G+ PNLV ++ L+ G       +   E+   +K+   
Sbjct: 325 VDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGF 384

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
             D I YS +++       ++ C ++++DM      PDA+ YS L   Y R ++ ++A E
Sbjct: 385 KHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALE 444

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +   MI  G  PNVV  T ++ G+ ++G +  A    DK+ + GV PNL T+  ++ G  
Sbjct: 445 VFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLC 504

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +  +P     I   M   G  P    + ++ +        +EA R+  K+ ++
Sbjct: 505 KVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDE 557



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/414 (22%), Positives = 192/414 (46%), Gaps = 1/414 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++     G+  +A  +F+ + + G  P + +Y+ L+  L  Q    + + ++ ++  NG
Sbjct: 289 VIHGFCHDGQVHKAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNG 348

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ + ++++++    +G +E A + F ++K+ G       Y+ ++ G       E   
Sbjct: 349 ITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICY 408

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L + M    N  P+   Y+ L+ A+C  + + EA  V   M   G+ P+VVT   +   
Sbjct: 409 DLWNDMVHH-NFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHG 467

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           ++  G   +A   + ++   GV PN  T  +II+G CK  K  +       M + G  P+
Sbjct: 468 FSNEGLIGEAFLFLDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPD 527

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V+++++I GFV+ +D      +   M +    P++ TY++++N       + +   +F 
Sbjct: 528 TVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFK 587

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G+ PD   Y+ L   Y +    + A E+   M   G   +  ++T +I G+    
Sbjct: 588 HMIGEGLTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVL 647

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           +MD A    ++M   G++P + T+  L+ GY +     +A  +   M   G+ P
Sbjct: 648 AMDGAQLFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAP 701



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 101/496 (20%), Positives = 209/496 (42%), Gaps = 73/496 (14%)

Query: 113 LLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNM--EEAMDTFWKMKE 170
           LL  L    +   + S+   ++ +G  P+   ++ +++ ++    +  EEA +   +M+ 
Sbjct: 182 LLKGLVEGNQIMYVRSLFDDMKISGPSPNIYSYSVLMSMYTHGAKLCLEEAQELLSEMEV 241

Query: 171 SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
            G+ P  +TY T + G   A + + +   L ++ + G    N   +N ++  +C++  + 
Sbjct: 242 EGVRPNAATYGTYLYGLCRAKQVKSAWNFLQMLCQRG-YPCNSYCFNAVIHGFCHDGQVH 300

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
           +A  V   M   G  PDV +Y+ +     + G+      ++VEM  NG+ PN  +   ++
Sbjct: 301 KAVEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLL 360

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD--------RDGVD---- 338
            G C+ G+++ A    + +K+ G   + +++++++ G  + +D         D V     
Sbjct: 361 HGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFV 420

Query: 339 -----------------------EVLALMKEFRVNPDVITYSTIMNAWSTAG-------F 368
                                  EV  LM    + P+V+T + +++ +S  G       F
Sbjct: 421 PDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLIGEAFLF 480

Query: 369 MDKCKE----------------------------IFDDMGKAGIKPDAHAYSILAKGYVR 400
           +DK ++                            IF DM K G  PD   YSI+  G+V+
Sbjct: 481 LDKVRQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSIIIDGFVK 540

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
             + ++A  L   M++ G  PN+  +T++I+G C D  +   + +F  M   G++P+   
Sbjct: 541 ALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLTPDRIL 600

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           + +L+  Y +      A EI + M+  G+      +  L            A+  + ++ 
Sbjct: 601 YTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMM 660

Query: 521 NKERTNEMEAEEDIPV 536
           NK  T  +    D+ +
Sbjct: 661 NKGLTPTVVTYTDLII 676



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/359 (23%), Positives = 150/359 (41%), Gaps = 36/359 (10%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + L++ L   G+ + A  +F  L + G K   + Y+ +L            + + + +
Sbjct: 355 SYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDM 414

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
             +   PD+  ++++I A+     ++EA++ F  M   G+ P   T   L+ G+   G  
Sbjct: 415 VHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMICDGICPNVVTCTILVHGFSNEGLI 474

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+   LD + R+  V PNL TY V++   C      + W +   M   G  PD V Y+ 
Sbjct: 475 GEAFLFLDKV-RQFGVVPNLCTYRVIINGLCKVNKPNDVWGIFADMIKRGYVPDTVLYSI 533

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG--------------------- 292
           I   + +  +  +A  +  +M   G +PN  T   +I+G                     
Sbjct: 534 IIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEG 593

Query: 293 --------------YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
                         YCK   +K AL   R M+  G+  +  ++  LI GF +++  DG  
Sbjct: 594 LTPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQ 653

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
             +  M    + P V+TY+ ++  +   G   K   +++ M +AGI PDA    IL  G
Sbjct: 654 LFMEEMMNKGLTPTVVTYTDLIIGYFKIGDEKKAMVMYNSMLQAGIAPDAKLSCILGLG 712


>gi|7413543|emb|CAB86023.1| putative protein [Arabidopsis thaliana]
          Length = 880

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 127/464 (27%), Positives = 215/464 (46%), Gaps = 39/464 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT------------ 118
           T R  T L+++        EA +    + E G + SLVTY+ ++   +            
Sbjct: 343 TSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWF 402

Query: 119 -----IQKRFN-SIH-----------------SIMSQVEENGMDPDSIFFNAVINAFSES 155
                I K  N SI+                 +++ ++EE G+D     ++ +++ ++  
Sbjct: 403 DEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMV 462

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
            + ++ +  F ++KE G TPT  TY  LI  Y   GK  +++++  +M  EG VK NL+T
Sbjct: 463 ADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKISKALEVSRVMKEEG-VKHNLKT 521

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           Y++++  +   K+   A+ V   M   GMKPDV+ YN I +A+   G  D+A + + EM+
Sbjct: 522 YSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQ 581

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
               +P  RT   II GY K G ++ +L     M+  G  P +  FN LI G VE   R 
Sbjct: 582 KLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGCVPTVHTFNGLINGLVE--KRQ 639

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
            V E+L  M    V+ +  TY+ IM  +++ G   K  E F  +   G+  D   Y  L 
Sbjct: 640 AV-EILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALL 698

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
           K   +    + A  +   M       N  ++  +I GW   G +  A ++  +M + GV 
Sbjct: 699 KACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVK 758

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           P++ T+ + +   S+A    RA + ++ M+A GV P   T+  L
Sbjct: 759 PDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYTTL 802



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/526 (24%), Positives = 226/526 (42%), Gaps = 105/526 (19%)

Query: 85  RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
           RG    A+  F  +   G  P+   YT+L+ A  + +  +   S + +++E G++   + 
Sbjct: 322 RGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALSCVRKMKEEGIEMSLVT 381

Query: 145 FNAVINAFSESG-----------------------------------NMEEAMDTFWKMK 169
           ++ ++  FS++G                                   NME A     +M+
Sbjct: 382 YSVIVGGFSKAGHAEAADYWFDEAKRIHKTLNASIYGKIIYAHCQTCNMERAEALVREME 441

Query: 170 ESGLTPTTSTYNTLIKGYGI-----------------------------------AGKPE 194
           E G+    + Y+T++ GY +                                    GK  
Sbjct: 442 EEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTVVTYGCLINLYTKVGKIS 501

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           +++++  +M  EG VK NL+TY++++  +   K+   A+ V   M   GMKPDV+ YN I
Sbjct: 502 KALEVSRVMKEEG-VKHNLKTYSMMINGFVKLKDWANAFAVFEDMVKEGMKPDVILYNNI 560

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
            +A+   G  D+A + + EM+    +P  RT   II GY K G ++ +L     M+  G 
Sbjct: 561 ISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGDMRRSLEVFDMMRRCGC 620

Query: 315 HPNLVIFNLLIKGF------VEIMDR---DGVD-----------------------EVLA 342
            P +  FN LI G       VEI+D     GV                        E   
Sbjct: 621 VPTVHTFNGLINGLVEKRQAVEILDEMTLAGVSANEHTYTKIMQGYASVGDTGKAFEYFT 680

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            ++   ++ D+ TY  ++ A   +G M     +  +M    I  ++  Y+IL  G+ R  
Sbjct: 681 RLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMSARNIPRNSFVYNILIDGWARRG 740

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           +  +A +L+  M + G  P++  +T+ IS     G M+RA +  ++M   GV PN+KT+ 
Sbjct: 741 DVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMNRATQTIEEMEALGVKPNIKTYT 800

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF--LLLAEARRAT 506
           TL+ G++ A  P +A    + MKA G+ P K+ +  LL +   RA+
Sbjct: 801 TLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLLTSLLSRAS 846



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 198/396 (50%), Gaps = 10/396 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L+N   + GK  +A  +   + E G K +L TY+ ++      K + +  ++ 
Sbjct: 483 TVVTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVF 542

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             + + GM PD I +N +I+AF   GNM+ A+ T  +M++    PTT T+  +I GY  +
Sbjct: 543 EDMVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKS 602

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G    S+++ D+M R G V P + T+N L+     ++   E   ++ +M  +G+  +  T
Sbjct: 603 GDMRRSLEVFDMMRRCGCV-PTVHTFNGLINGLVEKRQAVE---ILDEMTLAGVSANEHT 658

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  I   YA  G+  +A E    +++ G+  +  T   ++   CK G+++ AL   + M 
Sbjct: 659 YTKIMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSALAVTKEMS 718

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              +  N  ++N+LI G+    D     +++  MK+  V PD+ TY++ ++A S AG M+
Sbjct: 719 ARNIPRNSFVYNILIDGWARRGDVWEAADLIQQMKKEGVKPDIHTYTSFISACSKAGDMN 778

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  +  ++M   G+KP+   Y+ L KG+ R   PEKA      M   G  P+  ++  ++
Sbjct: 779 RATQTIEEMEALGVKPNIKTYTTLIKGWARASLPEKALSCYEEMKAMGIKPDKAVYHCLL 838

Query: 431 SGWCSDGSMDRA------IEVFDKMCEHGVSPNLKT 460
           +   S  S+  A      + +  +M E G+  ++ T
Sbjct: 839 TSLLSRASIAEAYIYSGVMTICKEMVEAGLIVDMGT 874



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 106/409 (25%), Positives = 188/409 (45%), Gaps = 4/409 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           KPS   +  ++     +   +       ++   G+ P S  + ++I+A++   +M+EA+ 
Sbjct: 306 KPSRTEFGLMVKFYGRRGDMHRARETFERMRARGITPTSRIYTSLIHAYAVGRDMDEALS 365

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              KMKE G+  +  TY+ ++ G+  AG  E +    D   R      N   Y  ++ A 
Sbjct: 366 CVRKMKEEGIEMSLVTYSVIVGGFSKAGHAEAADYWFDEAKRIHKT-LNASIYGKIIYAH 424

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C   N+  A  ++ +M   G+   +  Y+T+   Y    +  +   V   ++  G  P  
Sbjct: 425 CQTCNMERAEALVREMEEEGIDAPIAIYHTMMDGYTMVADEKKGLVVFKRLKECGFTPTV 484

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T G +I+ Y K GKI +AL  +R MKE GV  NL  ++++I GFV++ D      V   
Sbjct: 485 VTYGCLINLYTKVGKISKALEVSRVMKEEGVKHNLKTYSMMINGFVKLKDWANAFAVFED 544

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M +  + PDVI Y+ I++A+   G MD+  +   +M K   +P    +  +  GY +  +
Sbjct: 545 MVKEGMKPDVILYNNIISAFCGMGNMDRAIQTVKEMQKLRHRPTTRTFMPIIHGYAKSGD 604

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
             ++ E+   M   G  P V  F  +I+G        +A+E+ D+M   GVS N  T+  
Sbjct: 605 MRRSLEVFDMMRRCGCVPTVHTFNGLINGLVEK---RQAVEILDEMTLAGVSANEHTYTK 661

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           +M GY+      +A E    ++  G+     T+  L +A   +G  + A
Sbjct: 662 IMQGYASVGDTGKAFEYFTRLQNEGLDVDIFTYEALLKACCKSGRMQSA 710


>gi|297846140|ref|XP_002890951.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297336793|gb|EFH67210.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 689

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/456 (24%), Positives = 213/456 (46%), Gaps = 35/456 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++++L  +G+  +A      ++E G +  +V+   +L  L++ +       ++S V + G
Sbjct: 115 VLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILKGLSVDQ-IEVASRMLSLVLDCG 173

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG------ 191
             P+ + F  +IN F + G M+ A + F  M++ G+ P    Y+TLI GY  AG      
Sbjct: 174 PAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGH 233

Query: 192 -----KPEESVKL--------LDLMSREG---------------NVKPNLRTYNVLVRAW 223
                   + VKL        +D+  + G                + PN+ TY +L++  
Sbjct: 234 KLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGL 293

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C +  I EA+ +  ++   G++P VVTY+++   + + G       +  +M   G  P+ 
Sbjct: 294 CQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDV 353

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
              G+++ G CK+G +  ALRF+       + PN+V+FN LI G+  +   D   +V  L
Sbjct: 354 VIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRL 413

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M  + + PDV T +T+M      G + +   +F  M K G++PDA A+  L   + +  +
Sbjct: 414 MGIYGIKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMK 473

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
           P    +L   M  +    ++ +   +I+      S++ A + F+ + E  + P++ T+ T
Sbjct: 474 PTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNT 533

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           ++ GY   R+   A  I +++K     P   T  +L
Sbjct: 534 MICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTIL 569



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/485 (21%), Positives = 199/485 (41%), Gaps = 67/485 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N   +RG+   A  +F  + + G  P L+ Y+TL+            H + S
Sbjct: 178 VVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAYSTLIDGYFKAGMLGMGHKLFS 237

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q    G+  D + F++ I+ + + G +  A D + +M   G++P   TY  LIKG    G
Sbjct: 238 QALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLCQGISPNVVTYTILIKGLCQDG 297

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +  E+  +   + + G ++P++ TY+ L+  +C   N+   + +   M   G  PDVV Y
Sbjct: 298 RIYEAFGIYCQILKRG-LEPSVVTYSSLIDGFCKYGNLRSGFALYEDMIKMGYPPDVVIY 356

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     + G    A    V+     ++PN      +I G+C+  +  EAL+  R M  
Sbjct: 357 GVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLNRCDEALKVFRLMGI 416

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR--VNPDVITYSTIMNAWS----- 364
           YG+ P++     L++  V +M+    + +    + F+  + PD + + T+M+A+      
Sbjct: 417 YGIKPDVATITTLMR--VTVMEGRLKEGLFLFFRMFKMGLEPDAVAFCTLMDAFCKNMKP 474

Query: 365 TAGF------------------------------MDKCKEIFDDMGKAGIKPDAHAYSIL 394
           T G                               +++  + F+++ +  ++PD   Y+ +
Sbjct: 475 TIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLEGKMEPDIVTYNTM 534

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII------------------------ 430
             GY   +  ++A  +   +  + F PN V  T +I                        
Sbjct: 535 ICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTLCKNSDMDGALRIISPSIISYS 594

Query: 431 ---SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
               G C  G +D A  +F +  +  + P++  +  L+ G  +  +   A  + + M   
Sbjct: 595 IIIDGLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIRGCCKVGRLVEAALLYEHMLRN 654

Query: 488 GVHPQ 492
           GV P 
Sbjct: 655 GVKPD 659



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 187/403 (46%), Gaps = 13/403 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+  L + G+  EA  I+  +++ G +PS+VTY++L+          S  ++  
Sbjct: 283 VVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRSGFALYE 342

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G  PD + +  +++   + G M  A+    K     + P    +N+LI G+    
Sbjct: 343 DMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRFSVKTLGQSIRPNVVVFNSLIDGWCRLN 402

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E++K+  LM   G +KP++ T   L+R    E  + E   +  +M   G++PD V +
Sbjct: 403 RCDEALKVFRLMGIYG-IKPDVATITTLMRVTVMEGRLKEGLFLFFRMFKMGLEPDAVAF 461

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+  A+ +N +     ++   M+ N +  +   C ++I+   K   ++EA +F   + E
Sbjct: 462 CTLMDAFCKNMKPTIGLQLFDLMQRNKIPADIAVCNVVINLLFKGQSVEEASKFFNNLLE 521

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             + P++V +N +I G+  +   D    +  ++K     P+ +T + +++          
Sbjct: 522 GKMEPDIVTYNTMICGYCSLRRLDEAARIFEMLKFTPFGPNAVTLTILIHTL-------- 573

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
           CK    D     I P   +YSI+  G  +    ++A  +    I++   P+VV +  +I 
Sbjct: 574 CKNSDMDGALRIISPSIISYSIIIDGLCKRGRVDEATNIFHQAIDAKILPDVVAYAILIR 633

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           G C  G +  A  +++ M  +GV P+    + L    SE + P
Sbjct: 634 GCCKVGRLVEAALLYEHMLRNGVKPD----DLLQRALSEYKPP 672



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 128/279 (45%), Gaps = 2/279 (0%)

Query: 238 KMAASGMKP-DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
           K+   G  P  V  +  +  A  + GE  +A +    +   G + +  +C  I+ G   +
Sbjct: 98  KLCRGGTVPFGVSAHGFVLDALFRKGEVTKALDFHRLVMERGFRVDIVSCNKILKGLSVD 157

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
            +I+ A R    + + G  PN+V F  LI GF +  + D   E+  +M++  + PD+I Y
Sbjct: 158 -QIEVASRMLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFELFKVMEQRGIAPDLIAY 216

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           ST+++ +  AG +    ++F      G+K D   +S     YV+      A ++   M+ 
Sbjct: 217 STLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKFGYLTTAFDVYKRMLC 276

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G  PNVV +T +I G C DG +  A  ++ ++ + G+ P++ T+ +L+ G+ +      
Sbjct: 277 QGISPNVVTYTILIKGLCQDGRIYEAFGIYCQILKRGLEPSVVTYSSLIDGFCKYGNLRS 336

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
              + + M   G  P    + +L +     GL   A R 
Sbjct: 337 GFALYEDMIKMGYPPDVVIYGVLVDGLCKQGLMLHALRF 375


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 208/415 (50%), Gaps = 4/415 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           LMN   +  +P  A +    L++ G +P + T+T+L+    +  R     S+++Q+ E G
Sbjct: 112 LMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMG 171

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD + +  +I++  ++G+++ A+  F +M+  G+ P    Y +L+ G   +G+  ++ 
Sbjct: 172 IKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDAD 231

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M +   +KP++ T+N L+ A+  E  + +A  + ++M    + P++ TY ++   
Sbjct: 232 LLLRGMMKR-KIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLING 290

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G  D+A ++   ME  G  P+      +I+G+CK  K+++A++    M + G+  N
Sbjct: 291 LCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGN 350

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +  LI+GF  +   +   EV   M    V P++ TY+ +++     G ++K   IF+
Sbjct: 351 TITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFE 410

Query: 378 DMGKA---GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           DM K    G+ P+   Y++L  G     + EKA  +   M +      ++ +T II G C
Sbjct: 411 DMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMC 470

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
             G +  A+ +F  +   GV PN+ T+ T++ G         A  + + MK  GV
Sbjct: 471 KAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLFRKMKEDGV 525



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 194/381 (50%), Gaps = 4/381 (1%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           EA  +F++++E    PS++ +T LL  +   K+F+ + ++   ++  G+  D    N ++
Sbjct: 54  EALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMGVSNDLYTCNLLM 113

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N F +S     A     K+ + G  P   T+ +LI G+ +  + EE++ +++ M   G +
Sbjct: 114 NCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMG-I 172

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           KP++  Y  ++ + C   ++  A ++ ++M   G++PDVV Y ++      +G    A+ 
Sbjct: 173 KPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADL 232

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           ++  M    ++P+  T   +I  + KEGK+ +A      M +  + PN+  +  LI G  
Sbjct: 233 LLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLC 292

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
                D   ++  LM+     PDV+ Y++++N +     ++   +IF +M + G+  +  
Sbjct: 293 MEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTI 352

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+ L +G+    +P  A+E+   M+  G  PN+  +  ++   C +G +++A+ +F+ M
Sbjct: 353 TYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDM 412

Query: 450 CEH---GVSPNLKTFETLMWG 467
            +    GV PN++T+  L+ G
Sbjct: 413 QKREIDGVPPNIRTYNVLLHG 433



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 180/370 (48%), Gaps = 1/370 (0%)

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
            S    EA+D F  M ES   P+   +  L+       K +  + L   +   G V  +L
Sbjct: 48  HSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIMG-VSNDL 106

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            T N+L+  +C       A + + K+   G +PD+ T+ ++   +      ++A  ++ +
Sbjct: 107 YTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAMSMVNQ 166

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M   G++P+      II   CK G +  AL     M+ YG+ P++V++  L+ G      
Sbjct: 167 MVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGLCNSGR 226

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
               D +L  M + ++ PDVIT++ +++A+   G +   KE++++M +  I P+   Y+ 
Sbjct: 227 WRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNIFTYTS 286

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L  G   E   ++A ++   M   G  P+VV +T++I+G+C    ++ A+++F +M + G
Sbjct: 287 LINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYEMSQKG 346

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           ++ N  T+ TL+ G+    +P  A+E+   M + GV P   T+ +L       G   +A 
Sbjct: 347 LTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGKVNKAL 406

Query: 514 RILSKIKNKE 523
            I   ++ +E
Sbjct: 407 MIFEDMQKRE 416



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/390 (27%), Positives = 190/390 (48%), Gaps = 10/390 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + + T L+N      + +EA ++ N ++E G KP +V YTT++ +L      ++  S+ +
Sbjct: 141 IFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFN 200

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+E  G+ PD + + +++N    SG   +A      M +  + P   T+N LI  +   G
Sbjct: 201 QMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEG 260

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K  ++ +L + M  + ++ PN+ TY  L+   C E  + EA  + + M   G  PDVV Y
Sbjct: 261 KLLDAKELYNEMI-QMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAY 319

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++   + +  + + A ++  EM   G+  N  T   +I G+   GK   A      M  
Sbjct: 320 TSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVS 379

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR------VNPDVITYSTIMNAWST 365
            GV PN+  +N+L+           V++ L + ++ +      V P++ TY+ +++    
Sbjct: 380 RGVPPNIRTYNVLLHCLCY---NGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCY 436

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G ++K   +F DM K  +      Y+I+ +G  +  + + A  L  ++   G  PNVV 
Sbjct: 437 NGKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVT 496

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
           +TT+ISG   +G M  A  +F KM E GVS
Sbjct: 497 YTTMISGLFREGLMLEAHVLFRKMKEDGVS 526



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 148/319 (46%), Gaps = 16/319 (5%)

Query: 220 VRAWCNEKNI----------TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           VRA+CN + I           EA ++   M  S   P ++ +  +    A+  + D    
Sbjct: 33  VRAFCNYREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVIN 92

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +   ++  GV  +  TC ++++ +C+  +   A  F   + + G  P++  F  LI GF 
Sbjct: 93  LCKHLQIMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFC 152

Query: 330 EIMDRDGVDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
            + +R  ++E +++   M E  + PDV+ Y+TI+++    G +D    +F+ M   GI+P
Sbjct: 153 -LGNR--IEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRP 209

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   Y+ L  G         A+ LL  M++    P+V+ F  +I  +  +G +  A E++
Sbjct: 210 DVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELY 269

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           ++M +  ++PN+ T+ +L+ G     +   A ++  +M+  G  P    +  L       
Sbjct: 270 NEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKC 329

Query: 507 GLTKEAKRILSKIKNKERT 525
              ++A +I  ++  K  T
Sbjct: 330 KKVEDAMKIFYEMSQKGLT 348


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/459 (24%), Positives = 210/459 (45%), Gaps = 8/459 (1%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G +P+  TY T L  L   K+  S  + +  + + G   ++  FNAVI+ F   G + +A
Sbjct: 243 GVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKA 302

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           ++ F  MK+ G  P   +Y+ L+ G    G       +L  M+R G + PNL +Y+ L+ 
Sbjct: 303 IEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNG-ITPNLVSYSSLLH 361

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C    +  A+ +  ++   G K D + Y+ +     Q+ + +   ++  +M H+   P
Sbjct: 362 GLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVP 421

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +      +I  YC+  ++KEAL     M   G+ PN+V   +L+ GF    +   + E  
Sbjct: 422 DAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGF---SNEGLIGEAF 478

Query: 342 ALM---KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
             +   ++F V P + TY  I++        +    IF DM K G  PD   YSI+  G+
Sbjct: 479 LFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGF 538

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           V+  + ++A  L   M++ G  PN+  +T++I+G C D  +   + +F  M   G++P+ 
Sbjct: 539 VKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDR 598

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
             + +L+  Y +      A EI + M+  G+      +  L            A+  + +
Sbjct: 599 ILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEE 658

Query: 519 IKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQ 557
           + NK  T  +    D+ V    ++  ++   A Y ++LQ
Sbjct: 659 MMNKGLTPTVVTYTDLIVGYF-KIGDEKKAMAMYNSMLQ 696



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 183/391 (46%), Gaps = 7/391 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + L++ L ++G       +   +   G  P+LV+Y++LL  L    R      +  
Sbjct: 318 VHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFK 377

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++++ G   D I ++ V++   +  ++E   D +  M      P    Y++LI  Y    
Sbjct: 378 RLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHR 437

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E++++ +LM  +G + PN+ T  +LV  + NE  I EA+  + K+   G+ P + TY
Sbjct: 438 QLKEALEVFELMVSDG-ICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTY 496

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             I     +  + +    +  +M   G  P+     III G+ K   ++EA R    M +
Sbjct: 497 RVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVD 556

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGF 368
            G  PN+  +  LI G       D + EV+ L K      + PD I Y++++  +     
Sbjct: 557 EGTKPNIFTYTSLINGLCH---DDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSN 613

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           M    EIF +M   G+  D+  Y+ L  G+ +    + A+  +  M+  G  P VV +T 
Sbjct: 614 MKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTD 673

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +I G+   G   +A+ +++ M + G++P+ K
Sbjct: 674 LIVGYFKIGDEKKAMAMYNSMLQAGIAPDAK 704



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/473 (23%), Positives = 214/473 (45%), Gaps = 22/473 (4%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIE--GGHKPSLVTYTTLLAA-----LTIQKR 122
           R++     LM S + R + ++ + +  ++++  G   P L     +LA+     +T+ + 
Sbjct: 87  RSIGLFALLMRSFLPR-RIRDVRCLIQSVVDHCGNAGPELFELVPMLASNLGGSMTLPQV 145

Query: 123 FNSI-----------HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES 171
           + ++            ++++ VE   +  +    N ++    E   +  A   F  MK S
Sbjct: 146 YATVIRVFVELSMFEDALVTYVEAKKVGVELQVCNFLLKRLVEGNQIMYARSLFDDMKSS 205

Query: 172 GLTPTTSTYNTLIKGY--GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
           G +P   +Y+ L+  Y  G     EE+++LL  M  EG V+PN  TY   +   C+ K +
Sbjct: 206 GPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEG-VRPNAATYATYLYGLCHAKQV 264

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
             AWN +  +   G   +   +N +   +  +G+  +A EV   M+  G  P+  +  I+
Sbjct: 265 KSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSIL 324

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           + G CK+G +         M   G+ PNLV ++ L+ G       +   E+   +K+   
Sbjct: 325 VDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGF 384

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
             D I YS +++       ++ C ++++DM      PDA+ YS L   Y R ++ ++A E
Sbjct: 385 KHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALE 444

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           +   M+  G  PNVV  T ++ G+ ++G +  A    DK+ + GV P+L T+  ++ G  
Sbjct: 445 VFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLC 504

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +  +P     I   M   G  P    + ++ +        +EA R+  K+ ++
Sbjct: 505 KVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDE 557



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 143/304 (47%), Gaps = 1/304 (0%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           ++N+++     P    Y++L+ A    ++      +   +  +G+ P+ +    +++ FS
Sbjct: 410 LWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFS 469

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
             G + EA     K+++ G+ P+  TY  +I G     KP +   +   M + G V P+ 
Sbjct: 470 NEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYV-PDT 528

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
             Y++++  +    ++ EA+ + +KM   G KP++ TY ++      + +  +   +   
Sbjct: 529 VLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKH 588

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M   G+ P+      +I+ YCK   +K AL   R M+  G+  +  ++  LI GF +++ 
Sbjct: 589 MIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLA 648

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            DG    +  M    + P V+TY+ ++  +   G   K   +++ M +AGI PDA    I
Sbjct: 649 MDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPDAKLSCI 708

Query: 394 LAKG 397
           L  G
Sbjct: 709 LGLG 712



 Score =  109 bits (272), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 117/249 (46%), Gaps = 1/249 (0%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C  V + T L++     G   EA    + + + G  PSL TY  ++  L    + N +  
Sbjct: 455 CPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWG 514

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           I + + + G  PD++ ++ +I+ F ++ +++EA   ++KM + G  P   TY +LI G  
Sbjct: 515 IFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLC 574

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
              K  E + L   M  EG + P+   Y  L+  +C   N+  A  +  +M   G+  D 
Sbjct: 575 HDDKLPEVMTLFKHMIGEG-LAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADS 633

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
             Y  +   +++    D A+  + EM + G+ P   T   +I GY K G  K+A+    +
Sbjct: 634 FVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNS 693

Query: 309 MKEYGVHPN 317
           M + G+ P+
Sbjct: 694 MLQAGIAPD 702


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 208/442 (47%), Gaps = 6/442 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++N+    G  ++A   F  + E G KPS+  Y  +L AL  + +F  I+ I + ++ +G
Sbjct: 114 VINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDG 173

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++ +   +N ++ A  ++  ++ A     +M   G  P   +Y T++      GK EE+ 
Sbjct: 174 IELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAR 233

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L         +K  +  YN L+  +C E  + E + + ++MA  G+ PDV+TY+T+   
Sbjct: 234 EL------SMRIKSFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINT 287

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            ++ G  + A  V+ +M   G  PN  T   ++ GY   G++ EAL     M + G  PN
Sbjct: 288 LSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPN 347

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +N LI G            V   M+   V P+  TYST+++ ++ AG +    EI++
Sbjct: 348 TVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWN 407

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   G  P+   Y+ +     R      A  L+  M      PN + F T I G C  G
Sbjct: 408 KMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSG 467

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
             + A++V ++M ++G +PN+ T+  ++ G   A++   A +I+  ++   +     T+ 
Sbjct: 468 KTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYN 527

Query: 498 LLAEARRATGLTKEAKRILSKI 519
            +       G+ K A +I  K+
Sbjct: 528 TILSGFCHAGMFKGALQIAGKL 549



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/430 (26%), Positives = 208/430 (48%), Gaps = 42/430 (9%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T +++S+   GK +EA+ +   +     K  +  Y  L+     + +   +  + +++
Sbjct: 215 SYTTVVSSMCRLGKVEEARELSMRI-----KSFVPVYNALINGFCREHKMEEVFELFNEM 269

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G+DPD I ++ VIN  SE GN+E A+    KM   G +P   T+ +L+KGY + G+ 
Sbjct: 270 AVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRL 329

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E++ L + M +EG+ +PN   YN L+   C+   + EA +V  KM  +G+ P+  TY+T
Sbjct: 330 CEALDLWNRMIQEGS-EPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYST 388

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNG--RTCGI----------------------- 288
           +   +A+ G+   A E+  +M  NG  PN    TC +                       
Sbjct: 389 LIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGN 448

Query: 289 ----------IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
                      I G C  GK + A++    M++YG  PN+  +N ++ G           
Sbjct: 449 CPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREAL 508

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           +++  ++E  +  +++TY+TI++ +  AG      +I   +   G KPD+  Y+ +   Y
Sbjct: 509 QIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAY 568

Query: 399 VREQEPEKAEELLMTMIESG-FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
            ++ E + A +L+  + + G  +P+V  +T+++ G C+   +D A+   DKM   G+ PN
Sbjct: 569 CKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMINEGICPN 628

Query: 458 LKTFETLMWG 467
             T+  L+ G
Sbjct: 629 RATWNALVRG 638



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 193/419 (46%), Gaps = 43/419 (10%)

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
           H P  +TYTT++  L  ++  + I  ++  ++  G+  +   F  VINA+  +G  E+A+
Sbjct: 71  HTP--LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQAL 128

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
            TF+++ E G  P+   YN ++       K +    + + M R+G ++ N+ TYN+L++A
Sbjct: 129 KTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDG-IELNVYTYNMLLKA 187

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C    +  A  ++ +M+  G  PD V+Y T+ ++  + G+ ++A E+ + ++      N
Sbjct: 188 LCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYN 247

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
                 +I+G+C+E K++E       M   G+ P                          
Sbjct: 248 A-----LINGFCREHKMEEVFELFNEMAVEGIDP-------------------------- 276

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
                    DVITYST++N  S  G ++    +   M   G  P+ H ++ L KGY    
Sbjct: 277 ---------DVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGG 327

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
              +A +L   MI+ G  PN V + T+I G CS G M  A+ V  KM  +GV PN  T+ 
Sbjct: 328 RLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYS 387

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           TL+ G+++A     A EI   M   G  P    +  + +      +   A  ++  + N
Sbjct: 388 TLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMAN 446



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 110/452 (24%), Positives = 209/452 (46%), Gaps = 6/452 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V+    ++++L+   K Q    I+NN+   G + ++ TY  LL AL    R ++   ++
Sbjct: 142 SVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLL 201

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++   G  PD++ +  V+++    G +EEA +   ++K     P    YN LI G+   
Sbjct: 202 AEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKS--FVPV---YNALINGFCRE 256

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K EE  +L + M+ EG + P++ TY+ ++       N+  A  V+ KM   G  P+V T
Sbjct: 257 HKMEEVFELFNEMAVEG-IDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHT 315

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           + ++   Y   G   +A ++   M   G +PN      +I G C  GK+ EA+  ++ M+
Sbjct: 316 FTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKME 375

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             GV PN   ++ LI GF +  D  G  E+   M      P+V+ Y+ +++        +
Sbjct: 376 RNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFN 435

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               + ++M      P+   ++   KG     + E A ++L  M + G  PNV  +  ++
Sbjct: 436 HALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVL 495

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G  +      A+++  ++ E  +  NL T+ T++ G+  A     A +I   +   G  
Sbjct: 496 DGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTK 555

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+  +  A    G  K A +++ ++  K
Sbjct: 556 PDSITYNTVIYAYCKQGEVKTAIQLVDRLTKK 587



 Score = 63.2 bits (152), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 2/152 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +  ++++ L    + +EA  I   + E   K +LVTY T+L+       F     I  
Sbjct: 488 VTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAG 547

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL-TPTTSTYNTLIKGYGIA 190
           ++   G  PDSI +N VI A+ + G ++ A+    ++ + G   P   TY +L+ G    
Sbjct: 548 KLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNW 607

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
              +E+V  LD M  EG + PN  T+N LVR 
Sbjct: 608 IGVDEAVVHLDKMINEG-ICPNRATWNALVRG 638



 Score = 45.8 bits (107), Expect = 0.079,   Method: Compositional matrix adjust.
 Identities = 35/174 (20%), Positives = 73/174 (41%), Gaps = 2/174 (1%)

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
           F+  P  +TY+T++        +D  + +   M   GI  +   + I+   Y R    E+
Sbjct: 69  FKHTP--LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQ 126

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A +    + E G  P+V I+  ++    S+        +++ M   G+  N+ T+  L+ 
Sbjct: 127 ALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLK 186

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
              +  +   A ++L  M   G  P   ++  +  +    G  +EA+ +  +IK
Sbjct: 187 ALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIK 240


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 123/504 (24%), Positives = 216/504 (42%), Gaps = 72/504 (14%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S+  L+N+ ++ GK  +A A    + E G K SL +   +L AL    +   +   + + 
Sbjct: 162 SVDLLVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKES 221

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            +     D    N V+N+    G + +A     KMK   L P   TYNT++  Y   G+ 
Sbjct: 222 LDRKFPLDVTTCNIVLNSLCTQGKLSKAESMLQKMKNCRL-PNAVTYNTILNWYVKKGRC 280

Query: 194 EESVKLLDLMS----------------------------------REGNVKPNLRTYNVL 219
           + ++++LD M                                   RE N+ P+  +YN L
Sbjct: 281 KSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTL 340

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +  +  E  I  A  + ++M    +KP V TY  +   Y +NG  D+A  V+ EM+  GV
Sbjct: 341 IHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGV 400

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           +P+  T   +++GYCK  K+  AL   + ++   +  N  ++ +LI GF ++ +     +
Sbjct: 401 RPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQ 460

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +L  M    ++PDVITYS ++N     G + + KEI   M K+G+ P+   Y+ L   + 
Sbjct: 461 ILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFC 520

Query: 400 REQEPEKAEELLMTMIESGFHPNVVI---------------------------------- 425
           +    ++A +  + +  SG   N VI                                  
Sbjct: 521 KAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVA 580

Query: 426 -FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            F  II  +C  G++  A  V+D M  HG  P++ T+ +L+ G  +     +A+E +  +
Sbjct: 581 SFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYL 640

Query: 485 --KAFGVHPQKSTFLLLAEARRAT 506
             KA  +  +    LL+   +  T
Sbjct: 641 LEKACAIDEKTLNTLLVGICKHGT 664



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 219/468 (46%), Gaps = 18/468 (3%)

Query: 72   VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
            V S   +++S  +RG   EA ++++N++  G  P + TY +LL  L            M 
Sbjct: 579  VASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMV 638

Query: 132  QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
             + E     D    N ++    + G ++EA+D   KM    + P T TY  L+ G+   G
Sbjct: 639  YLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRG 698

Query: 192  KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVT 250
            K   ++ LL +M  +G V P+   Y  L+    NE  +  A  +  ++    G+  D + 
Sbjct: 699  KVVPALILLQMMLEKGLV-PDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIA 757

Query: 251  YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            YN++   Y + G+ ++ E ++  M  N V P+  +  I++ GY K+G++   L   R M 
Sbjct: 758  YNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMV 817

Query: 311  EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST----- 365
            + G+ P+ V + LLI G  E    +   + L  M    V PD + +  ++ A+S      
Sbjct: 818  KEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMS 877

Query: 366  -----------AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
                        G +D   E+ +DM   G+ P   A S + +G  +  + E+A  +  ++
Sbjct: 878  NALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSI 937

Query: 415  IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
            + +G  P +  FTT++ G C +  +D A  +   M   G+  ++ T+  L+ G    +  
Sbjct: 938  MRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCI 997

Query: 475  WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              A ++ + MK+ G+ P  +T++ L  A  ATG  ++ +++L  I+++
Sbjct: 998  CDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDR 1045



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/497 (23%), Positives = 232/497 (46%), Gaps = 44/497 (8%)

Query: 67  ESCRTVRSMT--KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           ++CR   ++T   ++N  +++G+ + A  I +++ + G +  L TY  ++  L   KR  
Sbjct: 257 KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRSA 316

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
             + ++ ++ E  + PD   +N +I+ F   G +  A+  F +M    L P+ +TY  LI
Sbjct: 317 RAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALI 376

Query: 185 KGYGIAGKPEESVKLL--------------------------------DLMS--REGNVK 210
            GY   G+ +E+ ++L                                DL+   R  ++ 
Sbjct: 377 DGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSIS 436

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
            N   Y +L+  +C    +++A  ++  M A G+ PDV+TY+ +     + G   + +E+
Sbjct: 437 INRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEI 496

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           +  M+ +GV PN      ++  +CK G  KEAL++   +   G+  N VI N L+  F  
Sbjct: 497 LSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFY- 555

Query: 331 IMDRDGV----DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
              R+G+    ++    M   +++ DV +++ I++++   G + +   ++D+M + G  P
Sbjct: 556 ---REGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPP 612

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   Y  L +G  +     +A+E ++ ++E     +     T++ G C  G++D A+++ 
Sbjct: 613 DICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLC 672

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           +KM    + P+  T+  L+ G+ +  +   A  +LQ+M   G+ P    +  L       
Sbjct: 673 EKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNE 732

Query: 507 GLTKEAKRILSKIKNKE 523
           G  K A  +  +I  KE
Sbjct: 733 GQVKAASYMFQEIICKE 749



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/497 (23%), Positives = 230/497 (46%), Gaps = 65/497 (13%)

Query: 73  RSM-TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           R+M T L++   + G+  +A+ I   ++  G  P ++TY+ L+  +      +    I+S
Sbjct: 439 RTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILS 498

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++++G+ P+++ +  ++  F ++G+ +EA+  F  +  SGL   +  +N L+  +   G
Sbjct: 499 RMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREG 558

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E+ +    MSR   +  ++ ++N ++ ++C   N+ EA++V   M   G  PD+ TY
Sbjct: 559 MIAEAEQFKQYMSRM-KISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTY 617

Query: 252 NTIATAYAQNGEADQAEEVIV-----------------------------------EMEH 276
            ++     Q G   QA+E +V                                   +M  
Sbjct: 618 GSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVT 677

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
             + P+  T  I++ G+CK GK+  AL   + M E G+ P+ + +  L+ G V   +   
Sbjct: 678 RNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLV---NEGQ 734

Query: 337 VDEVLALMKEF----RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           V     + +E      +  D I Y+++MN +   G +++ + +  +M +  + P + +Y+
Sbjct: 735 VKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYN 794

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           IL  GY+++ +  +   L   M++ G  P+ V +  +I G C  G ++ A++  +KM   
Sbjct: 795 ILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLE 854

Query: 453 GVSPNLKTFETLMWGYSE-----------ARQPWRAE-----EILQIMKAFGVHPQKSTF 496
           GV P+   F+ L+  +SE           +   W  +     E+ + MKA GV P +   
Sbjct: 855 GVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSE--- 911

Query: 497 LLLAEARRATGLTKEAK 513
             +AE+    GL K  K
Sbjct: 912 --VAESSIVRGLCKCGK 926



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/410 (23%), Positives = 182/410 (44%), Gaps = 53/410 (12%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
            + T L++   +RGK   A  +   ++E G  P  + YT LL  L  + +  +   +  ++
Sbjct: 686  TYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEI 745

Query: 134  E-ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
              + G+  D I +N+++N + + G + E       M E+ + P++++YN L+ GY   G+
Sbjct: 746  ICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQ 805

Query: 193  PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
               ++ L   M +EG +KP+  TY +L+   C    I  A   + KM   G+ PD + ++
Sbjct: 806  LSRTLYLYRDMVKEG-IKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFD 864

Query: 253  TIATAYAQN----------------GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
             +  A+++                 G+ D A E+  +M+  GV P+      I+ G CK 
Sbjct: 865  ILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKC 924

Query: 297  GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
            GK++EA+    ++   G+ P +  F  L+ G               L KEF+++      
Sbjct: 925  GKVEEAIIVFSSIMRAGMVPTIATFTTLMHG---------------LCKEFKID------ 963

Query: 357  STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
                +A+     M+ C          G+K D   Y++L  G   ++    A +L   M  
Sbjct: 964  ----DAFHLKQLMESC----------GLKVDVVTYNVLITGLCNKKCICDALDLYEEMKS 1009

Query: 417  SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
             G  PN+  + T+     + G+M    ++   + + G+ P+ K  E+L W
Sbjct: 1010 KGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESLEW 1059


>gi|218184541|gb|EEC66968.1| hypothetical protein OsI_33625 [Oryza sativa Indica Group]
          Length = 1351

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 223/481 (46%), Gaps = 37/481 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +VR+ + LM +  +R   +    +   +   G KP++ +YT  +  L   +RF+  + I+
Sbjct: 273 SVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDEAYRIL 332

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++E  G  PD I    +I    ++G + +A D FWKMK+S   P   TY TL+  +   
Sbjct: 333 AEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLLDKFADN 392

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ +  +++ + M  +G    N+  Y  ++ A C    + EA  +  +M   G+ P+  +
Sbjct: 393 GESQSVMEIWNAMKADG-YNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIVPEQYS 451

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++ + + +      A E+   M+ +G +PNG T  + I+ Y K G+  +A++    MK
Sbjct: 452 YNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQRYELMK 511

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P++V  N ++ G  +         V   +K   V+PD ITY+ ++   S A   D
Sbjct: 512 SKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFD 571

Query: 371 KCKEIFDDM-------------------GKAG----------------IKPDAHAYSILA 395
           +  +IF DM                    KAG                ++P    Y+ L 
Sbjct: 572 EAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLL 631

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G  RE + ++   LL  M  S + PN++ + TI+   C +G+++ A+++   M   G  
Sbjct: 632 AGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCI 691

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P+L ++ T+++G  +  +   A  I   MK   + P  +T   +  +    GL KEA  I
Sbjct: 692 PDLSSYNTVIYGLVKEERYNEAFSIFCQMKKVLI-PDYATLCTILPSFVKIGLMKEALHI 750

Query: 516 L 516
           +
Sbjct: 751 I 751



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 115/497 (23%), Positives = 210/497 (42%), Gaps = 77/497 (15%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            ++  L + G+   A+ +F+ L   G  P  +TYT ++   +   +F+    I   + EN 
Sbjct: 525  VLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCSKASKFDEAVKIFYDMIENN 584

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              PD +  N++I+   ++G  +EA   F+++KE  L PT  TYNTL+ G G  GK +E +
Sbjct: 585  CVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDGTYNTLLAGLGREGKVKEVM 644

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-------------- 243
             LL+ M    N  PNL TYN ++   C    + +A ++++ M   G              
Sbjct: 645  HLLEEMYHS-NYPPNLITYNTILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYG 703

Query: 244  --------------------MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
                                + PD  T  TI  ++ + G   +A  +I E     +QP  
Sbjct: 704  LVKEERYNEAFSIFCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYF---LQPGS 760

Query: 284  RT------------------------------CGI---------IISGYCKEGKIKEALR 304
            +T                               GI         +I   CK+ K  EA  
Sbjct: 761  KTDRSSCHSLMEGILKKAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHE 820

Query: 305  FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
              +  K +GV      +N LI G V+    D  + + A MKE    PD  TY+ +++A  
Sbjct: 821  LVKKFKSFGVSLKTGSYNSLICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMG 880

Query: 365  TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             +  +++  ++ ++M + G +     Y+ +  G V+ +  E+A +L   ++  GF P   
Sbjct: 881  KSMRIEEMLKVQEEMHRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPC 940

Query: 425  IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
             +  ++ G    G ++ A  +F++M E+G   N   +  L+ G+  A    +   + Q M
Sbjct: 941  TYGPLLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDM 1000

Query: 485  KAFGVHPQKSTFLLLAE 501
               G++P   ++ ++ +
Sbjct: 1001 VDQGINPDIKSYTIIID 1017



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 106/448 (23%), Positives = 207/448 (46%), Gaps = 8/448 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTT----LLAALTIQKRFNSIHS 128
           R+   ++++L     P EA   F +      +P +V  T     +L  +    R   +  
Sbjct: 134 RAAEDVIHALRSADGPAEALERFRS---AARRPRVVHTTASCNYMLDLMRDHGRVGDMAE 190

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +   ++   +  +   F A+       G +  A      MKE+G+     TYN L+    
Sbjct: 191 VFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLV 250

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            +G   E++++  +M  +G V P++RTY+VL+ A+   +++     ++ +M A G+KP+V
Sbjct: 251 KSGFDREALEVYKVMMVDG-VVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNV 309

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            +Y        Q    D+A  ++ EME+ G +P+  T  ++I   C  G+I +A      
Sbjct: 310 YSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWK 369

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           MK+    P+ V +  L+  F +  +   V E+   MK    N +V+ Y+ +++A    G 
Sbjct: 370 MKKSDQKPDRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGR 429

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           + +  E+FD+M + GI P+ ++Y+ L  G+++      A EL   M   G  PN      
Sbjct: 430 VFEALEMFDEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVL 489

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
            I+ +   G   +AI+ ++ M   G+ P++     +++G +++ +   A+ +   +KA G
Sbjct: 490 FINYYGKSGESIKAIQRYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMG 549

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRIL 516
           V P   T+ ++ +         EA +I 
Sbjct: 550 VSPDTITYTMMIKCCSKASKFDEAVKIF 577



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 103/423 (24%), Positives = 191/423 (45%), Gaps = 38/423 (8%)

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +G+ P    ++ ++ AF +  ++E  +    +M+  G+ P   +Y   I+  G A + +E
Sbjct: 268 DGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIRVLGQARRFDE 327

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + ++L  M  EG  KP++ T+ VL++  C+   I++A +V  KM  S  KPD VTY T+ 
Sbjct: 328 AYRILAEMENEG-CKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKPDRVTYITLL 386

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             +A NGE+    E+   M+ +G   N      +I   C+ G++ EAL     MK+ G+ 
Sbjct: 387 DKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMFDEMKQKGIV 446

Query: 316 PNLVIFNLLIKGFVEIMDR------------------DGVDEVL---------------- 341
           P    +N LI GF++  DR                  +G   VL                
Sbjct: 447 PEQYSYNSLISGFLK-ADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKSGESIKAIQ 505

Query: 342 --ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
              LMK   + PDV+  + ++   + +G +   K +F ++   G+ PD   Y+++ K   
Sbjct: 506 RYELMKSKGIVPDVVAGNAVLFGLAKSGRLGMAKRVFHELKAMGVSPDTITYTMMIKCCS 565

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +  + ++A ++   MIE+   P+V++  ++I      G  D A ++F ++ E  + P   
Sbjct: 566 KASKFDEAVKIFYDMIENNCVPDVLVVNSLIDTLYKAGRGDEAWQIFYQLKEMNLEPTDG 625

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+ TL+ G     +      +L+ M      P   T+  + +     G   +A  +L  +
Sbjct: 626 TYNTLLAGLGREGKVKEVMHLLEEMYHSNYPPNLITYNTILDCLCKNGAVNDALDMLYSM 685

Query: 520 KNK 522
             K
Sbjct: 686 TTK 688



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 106/450 (23%), Positives = 212/450 (47%), Gaps = 15/450 (3%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            +++ L + G   +A  +  ++   G  P L +Y T++  L  ++R+N   SI  Q+++  
Sbjct: 665  ILDCLCKNGAVNDALDMLYSMTTKGCIPDLSSYNTVIYGLVKEERYNEAFSIFCQMKKV- 723

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT----STYNTLIKGYGIAGKP 193
            + PD      ++ +F + G M+EA+     +KE  L P +    S+ ++L++G       
Sbjct: 724  LIPDYATLCTILPSFVKIGLMKEALHI---IKEYFLQPGSKTDRSSCHSLMEGILKKAGT 780

Query: 194  EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+S++  ++++  G    +      L++  C +K   EA  ++ K  + G+     +YN+
Sbjct: 781  EKSIEFAEIIASSGITLDDF-FLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGSYNS 839

Query: 254  IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
            +          D AE +  EM+  G  P+  T  +++    K  +I+E L+    M   G
Sbjct: 840  LICGLVDENLIDIAEGLFAEMKELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEMHRKG 899

Query: 314  VHPNLVIFNLLIKGFVEIMDRD-GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
                 V +N +I G V+    +  +D    LM +   +P   TY  +++    AG ++  
Sbjct: 900  YESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQ-GFSPTPCTYGPLLDGLLKAGRIEDA 958

Query: 373  KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            + +F++M + G K +   Y+IL  G+      EK   L   M++ G +P++  +T II  
Sbjct: 959  ENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTIIIDT 1018

Query: 433  WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
             C  G ++  +  F ++ E G+ P+L T+  L+ G  ++++   A  +   M+  G+ P 
Sbjct: 1019 LCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGIVPN 1078

Query: 493  KSTF----LLLAEARRATGLTKEAKRILSK 518
              T+    L L +A +A    K  + +L+K
Sbjct: 1079 LYTYNSLILHLGKAGKAAEAGKMYEELLTK 1108



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 177/376 (47%), Gaps = 2/376 (0%)

Query: 148 VINAFSESGNMEEAMDTFWKM-KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           VI+A   +    EA++ F    +   +  TT++ N ++      G+  +  ++ D+M R+
Sbjct: 139 VIHALRSADGPAEALERFRSAARRPRVVHTTASCNYMLDLMRDHGRVGDMAEVFDVMQRQ 198

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
             VK N+ T+  +      E  +  A   +  M  +G+  +  TYN +     ++G   +
Sbjct: 199 -IVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFLVKSGFDRE 257

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A EV   M  +GV P+ RT  +++  + K   ++  L   R M+ +GV PN+  + + I+
Sbjct: 258 ALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNVYSYTICIR 317

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
              +    D    +LA M+     PDVIT++ ++     AG +   K++F  M K+  KP
Sbjct: 318 VLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWKMKKSDQKP 377

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           D   Y  L   +    E +   E+   M   G++ NVV +T +I   C  G +  A+E+F
Sbjct: 378 DRVTYITLLDKFADNGESQSVMEIWNAMKADGYNDNVVAYTAVIDALCQVGRVFEALEMF 437

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           D+M + G+ P   ++ +L+ G+ +A +   A E+ + M   G  P   T +L       +
Sbjct: 438 DEMKQKGIVPEQYSYNSLISGFLKADRFGDALELFKYMDIHGPKPNGYTHVLFINYYGKS 497

Query: 507 GLTKEAKRILSKIKNK 522
           G + +A +    +K+K
Sbjct: 498 GESIKAIQRYELMKSK 513



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 107/436 (24%), Positives = 190/436 (43%), Gaps = 3/436 (0%)

Query: 62   FC-MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNN-LIEGGHKPSLVTYTTLLAALTI 119
            FC M K       ++  ++ S ++ G  +EA  I     ++ G K    +  +L+  +  
Sbjct: 717  FCQMKKVLIPDYATLCTILPSFVKIGLMKEALHIIKEYFLQPGSKTDRSSCHSLMEGILK 776

Query: 120  QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
            +            +  +G+  D  F   +I    +     EA +   K K  G++  T +
Sbjct: 777  KAGTEKSIEFAEIIASSGITLDDFFLCPLIKHLCKQKKALEAHELVKKFKSFGVSLKTGS 836

Query: 180  YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
            YN+LI G       + +  L   M +E    P+  TYN+L+ A      I E   V  +M
Sbjct: 837  YNSLICGLVDENLIDIAEGLFAEM-KELGCGPDEFTYNLLLDAMGKSMRIEEMLKVQEEM 895

Query: 240  AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
               G +   VTYNTI +   ++   +QA ++   +   G  P   T G ++ G  K G+I
Sbjct: 896  HRKGYESTYVTYNTIISGLVKSRRLEQAIDLYYNLMSQGFSPTPCTYGPLLDGLLKAGRI 955

Query: 300  KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            ++A      M EYG   N  I+N+L+ G     + + V  +   M +  +NPD+ +Y+ I
Sbjct: 956  EDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQGINPDIKSYTII 1015

Query: 360  MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
            ++    AG ++     F  + + G++PD   Y++L  G  + +  E+A  L   M + G 
Sbjct: 1016 IDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAVSLFNEMQKKGI 1075

Query: 420  HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
             PN+  + ++I      G    A ++++++   G  PN+ T+  L+ GYS +     A  
Sbjct: 1076 VPNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRGYSVSGSTDSAYA 1135

Query: 480  ILQIMKAFGVHPQKST 495
                M   G  P  ST
Sbjct: 1136 AYGRMIVGGCLPNSST 1151



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 106/211 (50%), Gaps = 1/211 (0%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L++ L++ G+ ++A+ +FN ++E G K +   Y  LL    I      +  +   + + G
Sbjct: 945  LLDGLLKAGRIEDAENLFNEMLEYGCKANCTIYNILLNGHRIAGNTEKVCHLFQDMVDQG 1004

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            ++PD   +  +I+   ++G + + +  F ++ E GL P   TYN LI G G + + EE+V
Sbjct: 1005 INPDIKSYTIIIDTLCKAGQLNDGLTYFRQLLEMGLEPDLITYNLLIDGLGKSKRLEEAV 1064

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             L + M ++G V PNL TYN L+          EA  +  ++   G KP+V TYN +   
Sbjct: 1065 SLFNEMQKKGIV-PNLYTYNSLILHLGKAGKAAEAGKMYEELLTKGWKPNVFTYNALIRG 1123

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
            Y+ +G  D A      M   G  PN  TC I
Sbjct: 1124 YSVSGSTDSAYAAYGRMIVGGCLPNSSTCHI 1154



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/186 (23%), Positives = 82/186 (44%)

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           EV  +M+   V  +V T++ I       G +         M +AGI  +A+ Y+ L    
Sbjct: 190 EVFDVMQRQIVKANVGTFAAIFGGLGVEGGLRSAPVALPVMKEAGIVLNAYTYNGLVYFL 249

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
           V+     +A E+   M+  G  P+V  ++ ++  +     ++  + +  +M  HGV PN+
Sbjct: 250 VKSGFDREALEVYKVMMVDGVVPSVRTYSVLMVAFGKRRDVETVLWLLREMEAHGVKPNV 309

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            ++   +    +AR+   A  IL  M+  G  P   T  +L +     G   +AK +  K
Sbjct: 310 YSYTICIRVLGQARRFDEAYRILAEMENEGCKPDVITHTVLIQVLCDAGRISDAKDVFWK 369

Query: 519 IKNKER 524
           +K  ++
Sbjct: 370 MKKSDQ 375


>gi|255574572|ref|XP_002528197.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532409|gb|EEF34204.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 642

 Score =  179 bits (453), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 214/429 (49%), Gaps = 7/429 (1%)

Query: 80  NSLI----ERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           NS+I    + G  ++   I+N +   G+  P  VTY+ L++A      ++S   +  +++
Sbjct: 202 NSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMK 261

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           ENG+ P +  +  ++  + +   +E+A+D   +MK+ G T T  TY   IKG G AG+ +
Sbjct: 262 ENGLYPTAKIYTTLLGIYFKLDKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVD 321

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++ ++   M ++G  KP++   N L+        +     +  KM +   KP+VVTYNT+
Sbjct: 322 DAYRVFLDMIKDG-CKPDVVLINSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTV 380

Query: 255 ATA-YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
             A +     A +A     +M+  G+ P+  T  I+I G+CK  +I++AL     M E G
Sbjct: 381 IKALFECKAPASEAASWFEKMKGCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKG 440

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P    +  LI    ++   +  +E+   +KE   +     Y+ ++  +   G + +  
Sbjct: 441 FPPCPAAYCSLINSLGKVKRYEAANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAV 500

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           ++F++M K G KPD +AY+ L  G VR    ++A+ LL TM E+G  P++     I++G 
Sbjct: 501 DLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGL 560

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G  DRAIE+F KM    + P+  ++ T++   S A     A ++++ M   G     
Sbjct: 561 ARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLGCLSHAGLFEEAAKLMREMNLKGFEYNN 620

Query: 494 STFLLLAEA 502
            T+  + EA
Sbjct: 621 ITYTSILEA 629



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/416 (22%), Positives = 184/416 (44%), Gaps = 36/416 (8%)

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
           S++ + ++    ++  + +A+  F+++K     P  +TYN++I      G  E+  ++ +
Sbjct: 163 SVYLSEIVKLLGKAKMVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYN 222

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
            M  +GN  P+  TY+ L+ A+    +   A  +  +M  +G+ P    Y T+   Y + 
Sbjct: 223 EMCNDGNCFPDTVTYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKL 282

Query: 262 GEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIF 321
            + ++A +VI EM+  G      T    I G  K G++ +A R    M + G  P++V+ 
Sbjct: 283 DKVEKALDVIKEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLI 342

Query: 322 NLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA-WSTAGFMDKCKEIFDDMG 380
           N LI    ++   +   ++   M+ ++  P+V+TY+T++ A +       +    F+ M 
Sbjct: 343 NSLINILGKVGRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMK 402

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF--------------------- 419
             GI P +  YSIL  G+ +    EKA  LL  M E GF                     
Sbjct: 403 GCGIAPSSFTYSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINSLGKVKRYE 462

Query: 420 --------------HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
                         H +  ++  +I  +   G +  A+++F++M + G  P++  +  LM
Sbjct: 463 AANELFLELKENCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALM 522

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            G   A     A+ +L+ M   G  P  ++  ++      TG+   A  + +K+K+
Sbjct: 523 SGMVRAGMIDEAQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKS 578



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 159/348 (45%), Gaps = 5/348 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  + C  TV + T+ +  L + G+  +A  +F ++I+ G KP +V   +L+  L    R
Sbjct: 295 MKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKVGR 354

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSE-SGNMEEAMDTFWKMKESGLTPTTSTYN 181
                 +  ++E     P+ + +N VI A  E      EA   F KMK  G+ P++ TY+
Sbjct: 355 LEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFTYS 414

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            LI G+    + E+++ LL+ M  +G   P    Y  L+ +    K    A  +  ++  
Sbjct: 415 ILIDGFCKTNRIEKALLLLEEMDEKG-FPPCPAAYCSLINSLGKVKRYEAANELFLELKE 473

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
           +        Y  +   + + G   +A ++  EME  G +P+      ++SG  + G I E
Sbjct: 474 NCGHSSARVYAVMIKHFGKCGRLSEAVDLFNEMEKLGSKPDVYAYNALMSGMVRAGMIDE 533

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A    RTM E G  P+L   N+++ G       D   E+ A MK   + PD ++Y+T++ 
Sbjct: 534 AQSLLRTMDENGCSPDLNSHNIILNGLARTGVPDRAIEMFAKMKSSIIKPDAVSYNTVLG 593

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAY-SIL-AKGYVREQEPEKA 407
             S AG  ++  ++  +M   G + +   Y SIL A G V E     A
Sbjct: 594 CLSHAGLFEEAAKLMREMNLKGFEYNNITYTSILEAVGKVDEDRAPAA 641



 Score = 99.0 bits (245), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 92/371 (24%), Positives = 156/371 (42%), Gaps = 21/371 (5%)

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
           W  K       +S++  LI     AG   E  K +  M R      +    + +V+    
Sbjct: 116 WAGKRRNFEHDSSSFMALIHSLDEAGFYGEMWKTIQDMVRSSTCVISSVYLSEIVKLLGK 175

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG-VQPNGR 284
            K + +A +V +++     KP   TYN++     Q G  ++  E+  EM ++G   P+  
Sbjct: 176 AKMVNKALSVFYQIKGRKCKPAATTYNSMILMLKQEGHLEKVHEIYNEMCNDGNCFPDTV 235

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T   +IS + K G    A+R    MKE G++P   I+  L+  + ++   D V++ L ++
Sbjct: 236 TYSALISAFGKLGHYDSAIRLFDEMKENGLYPTAKIYTTLLGIYFKL---DKVEKALDVI 292

Query: 345 KEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
           KE +       V TY+  +     AG +D    +F DM K G KPD    + L     + 
Sbjct: 293 KEMKDKGCTLTVFTYTEWIKGLGKAGRVDDAYRVFLDMIKDGCKPDVVLINSLINILGKV 352

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISG-WCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
              E   +L   M      PNVV + T+I   +        A   F+KM   G++P+  T
Sbjct: 353 GRLEVTLKLFRKMESWQCKPNVVTYNTVIKALFECKAPASEAASWFEKMKGCGIAPSSFT 412

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  L+ G+ +  +  +A  +L+ M   G  P  + +  L  +             L K+K
Sbjct: 413 YSILIDGFCKTNRIEKALLLLEEMDEKGFPPCPAAYCSLINS-------------LGKVK 459

Query: 521 NKERTNEMEAE 531
             E  NE+  E
Sbjct: 460 RYEAANELFLE 470


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 205/432 (47%), Gaps = 11/432 (2%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           +P+LVTYTTL+AA          HS+  ++  NG+ PD +  ++++  F   G + EA  
Sbjct: 318 QPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV 377

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
            F +M E GL P   +Y T+I     +G+  E+  L   M   G +  ++ T   ++   
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRG-ISFDIVTCTTVMDGL 436

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
                  EA  V   +    + P+ VTY+ +   Y + G+ + AE V+ +ME   V PN 
Sbjct: 437 FKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNV 496

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T   II+GY K+G + +A+   R M +  V PN +++ +LI G+ +  ++D  D+    
Sbjct: 497 ITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKE 556

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           MK  R+    + +  ++N     G MD+ + +  DM   GI PD   Y+ L  GY +E  
Sbjct: 557 MKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGN 616

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
              A  ++  M E     +VV +  +I G    G  D    V  +M E G++P+  T+ T
Sbjct: 617 QLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPR-YVCSRMIELGLAPDCITYNT 675

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           ++  Y    +   A +IL  MK++G+ P   T+ +L      TG  ++A+  L       
Sbjct: 676 IINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESAL------- 728

Query: 524 RTNEMEAEEDIP 535
             +EM   E +P
Sbjct: 729 --DEMLVMEFVP 738



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 166/694 (23%), Positives = 282/694 (40%), Gaps = 112/694 (16%)

Query: 8   KAFLQTDDKYQSGSTI--VKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQT----HCS 61
           KAF +T D  ++ S    +   W      K N+   + ++  N +PT     T    +C 
Sbjct: 275 KAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEI-KNLQPTLVTYTTLIAAYCK 333

Query: 62  FCMNKESCRTVRSM------------TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVT 109
           F   +ES    + M            + ++      GK  EA  +F  + E G  P+ V+
Sbjct: 334 FVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVS 393

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK 169
           Y T++ +L    R     ++ SQ+   G+  D +    V++   + G  +EA + F  + 
Sbjct: 394 YATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETIL 453

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
           +  L P   TY+ L+ GY   GK E +  +L  M +E +V PN+ T++ ++  +  +  +
Sbjct: 454 KLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKE-HVPPNVITFSSIINGYAKKGML 512

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE-------------------- 269
           ++A +V+ +M    + P+ + Y  +   Y + GE D A++                    
Sbjct: 513 SKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDIL 572

Query: 270 ---------------VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                          +I++M   G+ P+      +I GY KEG    AL   + MKE  +
Sbjct: 573 LNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNI 632

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
             ++V +N LIKG + +   D    V + M E  + PD ITY+TI+N +   G  +   +
Sbjct: 633 RFDVVAYNALIKGLLRLGKYDP-RYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALD 691

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE----ELLMT----------------- 413
           I ++M   GI P+A  Y+IL  G  +    EKAE    E+L+                  
Sbjct: 692 ILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYS 751

Query: 414 --------------MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
                         ++ SG   ++ ++ T+I+ +C  G   +A  V D+M + G+S +L 
Sbjct: 752 RSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLV 811

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+  L+ GY       +A +    M   G+ P  +T+  L       GL +E      K+
Sbjct: 812 TYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKL 871

Query: 520 ---KNKERTNEMEAEEDIPVESLER--------LYHKEATTASYPNLLQIPNVVSSDQKG 568
               N+       A  DI V    R        + H E  T  +   L+  NV+ SD   
Sbjct: 872 VSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAK 931

Query: 569 SAAA----------LKKGRMLLRDADSSLECSWF 592
           S             L KGR+        L C W 
Sbjct: 932 SGKMIEARELLNDLLTKGRIPNSFTYDILTCGWL 965



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 213/437 (48%), Gaps = 26/437 (5%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           VTY T++     +   +    ++S++ + G+  DSI  N ++  +   G ++ A    + 
Sbjct: 163 VTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYN 222

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           + + G+T      NTLI GY  AG   ++ +L++  S   +VK ++ TYN L++A+C   
Sbjct: 223 LVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIE-NSWRSDVKIDIVTYNTLLKAFCKTG 281

Query: 228 NITEA----------W---------NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           ++T A          W         +V+ +     ++P +VTY T+  AY +    +++ 
Sbjct: 282 DLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESH 341

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            +  +M  NG+ P+  TC  I+ G+C+ GK+ EA    R M E G+ PN V +  +I   
Sbjct: 342 SLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIIN-- 399

Query: 329 VEIMDRDGVDEVLALMKEFRVNP---DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
             +     V E   L  +  V     D++T +T+M+     G   + +E+F+ + K  + 
Sbjct: 400 -SLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLA 458

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P+   YS L  GY +  + E AE +L  M +    PNV+ F++II+G+   G + +A++V
Sbjct: 459 PNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDV 518

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
             +M +  V PN   +  L+ GY +A +   A++  + MK+  +      F +L    + 
Sbjct: 519 LREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKR 578

Query: 506 TGLTKEAKRILSKIKNK 522
            G   EA+ ++  + +K
Sbjct: 579 VGRMDEARSLIIDMYSK 595



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 216/440 (49%), Gaps = 11/440 (2%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L+N+L   G+  EA+++  ++   G  P +V Y +L+     +    +  SI+ +++E  
Sbjct: 572  LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKN 631

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            +  D + +NA+I      G  +       +M E GL P   TYNT+I  Y I GK E+++
Sbjct: 632  IRFDVVAYNALIKGLLRLGKYDPRY-VCSRMIELGLAPDCITYNTIINTYCIKGKTEDAL 690

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
             +L+ M   G + PN  TYN+L+   C    + +A + + +M      P  +T+  +  A
Sbjct: 691  DILNEMKSYG-IMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKA 749

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            Y+++ +AD+  ++  ++  +G++ +      +I+ +C+ G  ++A      M + G+  +
Sbjct: 750  YSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISAD 809

Query: 318  LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK---- 373
            LV +N LI+G+      +   +  + M    + P++ TY+T++   S AG M++      
Sbjct: 810  LVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETE 869

Query: 374  EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            ++  +M + G+ P+A  Y IL  GY R    +K   L + MI  GF P +  +  +IS +
Sbjct: 870  KLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDY 929

Query: 434  CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
               G M  A E+ + +   G  PN  T++ L  G+         +  L+  +++ +  +K
Sbjct: 930  AKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLK--RSYEIEVKK 987

Query: 494  STFLLLAEARRATGLTKEAK 513
               LL+   R+    +K+A+
Sbjct: 988  ---LLIEMGRKGLKFSKKAE 1004



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 114/461 (24%), Positives = 208/461 (45%), Gaps = 69/461 (14%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ +++RG   ++    N L++G  +  LV Y                  +M  + + G
Sbjct: 184 LLSEMVKRGLCFDSITC-NILVKGYCRIGLVQYA---------------EWVMYNLVDGG 227

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG------ 191
           +  D I  N +I+ + E+G M +A +       S +     TYNTL+K +   G      
Sbjct: 228 VTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAE 287

Query: 192 ----------KPEESVKLLDLMSRE--GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
                     K E+ +K  D++++    N++P L TY  L+ A+C    + E+ ++  KM
Sbjct: 288 SLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKM 347

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN--------------GR- 284
             +G+ PDVVT ++I   + ++G+  +A  +  EM   G+ PN              GR 
Sbjct: 348 IMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRV 407

Query: 285 --------------------TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
                               TC  ++ G  K GK KEA     T+ +  + PN V ++ L
Sbjct: 408 MEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSAL 467

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           + G+ ++   +  + VL  M++  V P+VIT+S+I+N ++  G + K  ++  +M +  +
Sbjct: 468 LDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNV 527

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+   Y+IL  GY +  E + A++    M       + VIF  +++     G MD A  
Sbjct: 528 MPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARS 587

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +   M   G+ P++  + +L+ GY +      A  I+Q MK
Sbjct: 588 LIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMK 628



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/508 (23%), Positives = 226/508 (44%), Gaps = 62/508 (12%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLL-----AALTIQKRFNS------------------IH 127
           A A F+++   G  P+L  + TLL     + L  Q +                     +H
Sbjct: 78  ASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCGVVPDVFSVNVLVH 137

Query: 128 SI---------MSQVEENG-MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT 177
           S+         +  +  N  +D D++ +N VI  F + G +++      +M + GL   +
Sbjct: 138 SLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDS 197

Query: 178 STYNTLIKGYGIAGKPEES----VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
            T N L+KGY   G  + +      L+D     G V  ++   N L+  +C    +++A 
Sbjct: 198 ITCNILVKGYCRIGLVQYAEWVMYNLVD-----GGVTKDVIGLNTLIDGYCEAGLMSQAT 252

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE-------------------EVIVEM 274
            ++     S +K D+VTYNT+  A+ + G+  +AE                   +V+ + 
Sbjct: 253 ELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQN 312

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
           E   +QP   T   +I+ YCK   ++E+    + M   G+ P++V  + ++ GF      
Sbjct: 313 EIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKL 372

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
                +   M E  ++P+ ++Y+TI+N+   +G + +   +   M   GI  D    + +
Sbjct: 373 TEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTV 432

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G  +  + ++AEE+  T+++    PN V ++ ++ G+C  G M+ A  V  KM +  V
Sbjct: 433 MDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHV 492

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            PN+ TF +++ GY++     +A ++L+ M    V P    + +L +     G    A  
Sbjct: 493 PPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADD 552

Query: 515 ILSKIKNKERTNEMEAEEDIPVESLERL 542
              ++K++ R  E     DI + +L+R+
Sbjct: 553 FCKEMKSR-RLEESNVIFDILLNNLKRV 579



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 175/395 (44%), Gaps = 22/395 (5%)

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
           FF  +I  +        A  TF  M+  GL PT   +NTL+  +  +G   + VKL+   
Sbjct: 61  FFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQ-VKLMYSD 119

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
                V P++ + NVLV + C   ++  A   +       +  D VTYNT+   + Q G 
Sbjct: 120 MLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDI--DNVTYNTVIWGFCQKGL 177

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            DQ   ++ EM   G+  +  TC I++ GYC+ G ++ A      + + GV  +++  N 
Sbjct: 178 VDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNT 237

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK-- 381
           LI G+ E        E++       V  D++TY+T++ A+   G + + + +F+++    
Sbjct: 238 LIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFW 297

Query: 382 -----------------AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
                              ++P    Y+ L   Y +    E++  L   MI +G  P+VV
Sbjct: 298 KDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVV 357

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
             ++I+ G+C  G +  A  +F +M E G+ PN  ++ T++    ++ +   A  +   M
Sbjct: 358 TCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQM 417

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
              G+     T   + +     G TKEA+ +   I
Sbjct: 418 VVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETI 452



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/430 (22%), Positives = 183/430 (42%), Gaps = 22/430 (5%)

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK 169
           + TL+       RF++  +  S +   G+ P   F+N ++  F+ SG + +    +  M 
Sbjct: 62  FCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDML 121

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
             G+ P   + N L+      G  + +   L  +     V  +  TYN ++  +C +  +
Sbjct: 122 FCGVVPDVFSVNVLVHSLCKVGDLDLA---LGYLRNNDVVDIDNVTYNTVIWGFCQKGLV 178

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
            + + ++ +M   G+  D +T N +   Y + G    AE V+  +   GV  +      +
Sbjct: 179 DQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTL 238

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD----RDGVDEVLALMK 345
           I GYC+ G + +A           V  ++V +N L+K F +  D        +E+L   K
Sbjct: 239 IDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWK 298

Query: 346 E---------------FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           +                 + P ++TY+T++ A+     +++   ++  M   GI PD   
Sbjct: 299 DEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVT 358

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
            S +  G+ R  +  +A  L   M E G  PN V + TII+     G +  A  +  +M 
Sbjct: 359 CSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMV 418

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
             G+S ++ T  T+M G  +  +   AEE+ + +    + P   T+  L +     G  +
Sbjct: 419 VRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKME 478

Query: 511 EAKRILSKIK 520
            A+ +L K++
Sbjct: 479 LAELVLQKME 488


>gi|298204849|emb|CBI34156.3| unnamed protein product [Vitis vinifera]
          Length = 442

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 192/410 (46%), Gaps = 36/410 (8%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A + FN L+     PS+V +  LL ++   K ++++ S+ +Q++  G+ P+    N +I
Sbjct: 28  DALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILI 87

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N+F     +  A     K+ + G  P  +T+ TLI+G  + GK  E++ L D M  EG  
Sbjct: 88  NSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG-F 146

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +PN+ TY  L+   C   N + A  ++  M     +PDVV Y +I  +  ++ +  +A  
Sbjct: 147 QPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFN 206

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  +M   G+ P+  T   ++   C   + K        M    + P++VIF+ ++    
Sbjct: 207 LFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALC 266

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +        E++ +M +  V PDV+TY+T+M+       MD+  ++FD M + G  PD  
Sbjct: 267 KEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVI 326

Query: 390 AYSILAK-------GYVREQEP---------------------------EKAEELLMTMI 415
           +Y+ L         G V  QE                            EK   LL  M+
Sbjct: 327 SYTTLINAGKKDGGGLVSLQEVIGLVKETPDAVKGGAVEVIRKDKMKLFEKGRTLLNEMV 386

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN-LKTFETL 464
            S   PNVVIF+T++   C +G +  A +V D M + GV PN +K F+T+
Sbjct: 387 NSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNAVKVFDTM 436



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 80/297 (26%), Positives = 141/297 (47%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P++  +  L+ +    K+ +   ++  +M + G+ P+V T N +  ++        A  V
Sbjct: 43  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + ++   G QP+  T   +I G C EGKI EAL     M + G  PN+V +  LI G  +
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           + +      +L  M++    PDV+ Y++I+++      + +   +F  M   GI PD   
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 222

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ L        E +    LL  M+ S   P+VVIF+T++   C +G +  A E+ D M 
Sbjct: 223 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 282

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           + GV P++ T+ TLM G+    +   A ++  +M   G  P   ++  L  A +  G
Sbjct: 283 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDG 339



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 159/325 (48%), Gaps = 22/325 (6%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+  L   GK  EA  +F+ +I+ G +P++VTY TL+  L      ++   ++  +
Sbjct: 117 TFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSM 176

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+    PD + + ++I++  +   + EA + F +M   G++P   TY +L+       + 
Sbjct: 177 EQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEW 236

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +    LL+ M     + P++  ++ +V A C E  +TEA  ++  M   G++PDVVTY T
Sbjct: 237 KHVTTLLNQMVNS-KILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTT 295

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG----KIKEALRFARTM 309
           +   +    E D+A +V   M   G  P+  +   +I+   K+G     ++E +   +  
Sbjct: 296 LMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKET 355

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVD------EVLALMKEFRVNPDVITYSTIMNAW 363
                 P+ V       G VE++ +D +        +L  M   ++ P+V+ +ST+++A 
Sbjct: 356 ------PDAV-----KGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDAL 404

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDA 388
              G + +  ++ D M K G++P+A
Sbjct: 405 CKEGKVMEAHDVVDMMIKRGVEPNA 429



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 124/245 (50%), Gaps = 4/245 (1%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +++SL +  +  EA  +F+ ++  G  P + TYT+L+ AL     +  + ++++Q+  
Sbjct: 189 TSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVN 248

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           + + PD + F+ V++A  + G + EA +    M + G+ P   TY TL+ G+ +  + +E
Sbjct: 249 SKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDE 308

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +VK+ D+M R+G   P++ +Y  L+ A   +K+     ++   +      PD V    + 
Sbjct: 309 AVKVFDMMVRKG-FAPDVISYTTLINA--GKKDGGGLVSLQEVIGLVKETPDAVKGGAVE 365

Query: 256 TAYAQNGEA-DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                  +  ++   ++ EM ++ + PN      ++   CKEGK+ EA      M + GV
Sbjct: 366 VIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 425

Query: 315 HPNLV 319
            PN V
Sbjct: 426 EPNAV 430



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 97/228 (42%)

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           +++   K       L  +  M  +GV PN+   N+LI  F  +        VLA + +  
Sbjct: 51  LLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLG 110

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
             PD  T++T++      G + +   +FD M   G +P+   Y  L  G  +      A 
Sbjct: 111 HQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAI 170

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            LL +M +    P+VVI+T+II   C D  +  A  +F +M   G+SP++ T+ +L+   
Sbjct: 171 RLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHAL 230

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
               +      +L  M    + P    F  + +A    G   EA  I+
Sbjct: 231 CNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIV 278



 Score = 65.9 bits (159), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/193 (25%), Positives = 92/193 (47%), Gaps = 16/193 (8%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +N +    V   + ++++L + GK  EA  I + +I+ G +P +VTYTTL+    +Q   
Sbjct: 247 VNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM 306

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAF-SESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +    +   +   G  PD I +  +INA   + G +    +    +KE   TP       
Sbjct: 307 DEAVKVFDMMVRKGFAPDVISYTTLINAGKKDGGGLVSLQEVIGLVKE---TPDA----- 358

Query: 183 LIKGYGIAGKPEESVKLLD----LMSREGNVK--PNLRTYNVLVRAWCNEKNITEAWNVM 236
            +KG  +    ++ +KL +    L++   N K  PN+  ++ +V A C E  + EA +V+
Sbjct: 359 -VKGGAVEVIRKDKMKLFEKGRTLLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVV 417

Query: 237 HKMAASGMKPDVV 249
             M   G++P+ V
Sbjct: 418 DMMIKRGVEPNAV 430



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/169 (21%), Positives = 75/169 (44%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P ++ ++ ++ + +          +   M   G+ P+ +  +IL   +        A  +
Sbjct: 43  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 102

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           L  +++ G  P+   FTT+I G C +G +  A+ +FDKM + G  PN+ T+ TL+ G  +
Sbjct: 103 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 162

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
                 A  +L+ M+     P    +  + ++        EA  + S++
Sbjct: 163 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQM 211


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 216/477 (45%), Gaps = 40/477 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +L  R   + AQ   + ++  G +P   T+ +L+      ++ +    +  ++   G
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRG 194

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              D++ + A+I  F E+G ++EA++ F ++++    P   T+  L+KG   A + EE +
Sbjct: 195 FSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGL 250

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L  M +E   +P  R Y  LV  WC E+   EA  ++++M  +G+ P  VT   +  A
Sbjct: 251 YMLQKM-KELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNA 309

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G    A  V   M+  G +PN  T   ++ G+C  GK+ +A+     M+E GV P+
Sbjct: 310 YCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPD 369

Query: 318 LVIFNLLIKG------------FVEIMDRDG--------------------VDEVLALMK 345
           +V +NLLI+G             + +M+ +G                    VDE  +L  
Sbjct: 370 VVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFD 429

Query: 346 --EFR-VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
             E+R + P+ +T++T++N     G  D      + M  AG  PD + YS   +   + +
Sbjct: 430 GLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTK 489

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
              +    +  M++    P+ V +T +I     + +   A  ++ +M   G SP++ T+ 
Sbjct: 490 GSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYT 549

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T +  Y    +   AE ++  MK  G+      +  L +   + G T  A  IL  +
Sbjct: 550 TSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHM 606



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 179/366 (48%), Gaps = 5/366 (1%)

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNME 159
            G   P+  TY  L+ AL  +         +S +  +G  PD+  FN++I  +  +  ++
Sbjct: 122 HGPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLD 181

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
            A D F KM   G +    +Y  LI+G+   G+ +E+++L     RE   +P++ T+  L
Sbjct: 182 VAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELF----RELE-QPDMYTHAAL 236

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           V+  C+ +   E   ++ KM   G +P    Y  +   + +  +A++AE+++ EM  NG+
Sbjct: 237 VKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGL 296

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            P   TC  +++ YC+EG++  A+R   +MK  G  PN+  +N +++GF  +        
Sbjct: 297 VPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMA 356

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +L  M+E  V PDV+TY+ ++      G ++    +   M   G+  D + Y++L     
Sbjct: 357 LLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALC 416

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +  + ++A  L   +   G  PN V F T+I+G C  G  D A    +KM   G +P+  
Sbjct: 417 KTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTY 476

Query: 460 TFETLM 465
           T+   +
Sbjct: 477 TYSPFI 482



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 186/385 (48%), Gaps = 3/385 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L +  + +E   +   + E G +P+   Y  L+     +++      +++++ +NG
Sbjct: 236 LVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNG 295

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P ++   AV+NA+   G M  A+  F  MK  G  P   TYN +++G+   GK  +++
Sbjct: 296 LVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAM 355

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LLD M RE  V+P++ TYN+L+R  C + +I  A+ ++  M  +G+  D  TYN +  A
Sbjct: 356 ALLDQM-RECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDA 414

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + G+ D+A  +   +E+ G++PN  T   +I+G CK GK   A  F   M   G  P+
Sbjct: 415 LCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPD 474

Query: 318 LVIFNLLIKGFVEIM-DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
              ++  I+   +    R+G+  +  ++++  V P  + Y+ +++             I+
Sbjct: 475 TYTYSPFIENLCKTKGSREGLSFIDEMLQK-DVKPSTVNYTIVIDRLFKERNYGLATRIW 533

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             M   G  PD   Y+   + Y  E    +AE ++M M + G   + + + T+I G  S 
Sbjct: 534 GQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSI 593

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTF 461
           G  D A+ +   M      PN  TF
Sbjct: 594 GKTDHAVTILKHMTGVASMPNHFTF 618



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 191/419 (45%), Gaps = 21/419 (5%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+   L++      K +EA+ + N + + G  P  VT T ++ A   + R +    +   
Sbjct: 266 RAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFES 325

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           ++  G +P+   +NA++  F   G + +AM    +M+E G+ P   TYN LI+G  I G 
Sbjct: 326 MKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGH 385

Query: 193 PEESVKLLDLMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
            E + +LL LM  EGN +  +  TYNVL+ A C    + EA ++   +   G++P+ VT+
Sbjct: 386 IESAFRLLRLM--EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTF 443

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+     + G+ D A   + +M   G  P+  T    I   CK    +E L F   M +
Sbjct: 444 NTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQ 503

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             V P+ V + ++I    +  +      +   M     +PDV+TY+T + A+   G + +
Sbjct: 504 KDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHE 563

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF----- 426
            + +  +M K GI  DA AY+ L  G+    + + A  +L  M      PN   F     
Sbjct: 564 AENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLR 623

Query: 427 ------------TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
                           S W +    D   E+F+ M ++ V  + + +  ++ G+SE R+
Sbjct: 624 HLLQRRLAEDVPLKTTSVWKTIELAD-VFELFELMKKNSVPSSARAYLAILEGFSEERR 681



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 184/417 (44%), Gaps = 19/417 (4%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  +A A+ + + E G +P +VTY  L+    I     S   ++  +E NG+  D   +
Sbjct: 349 GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTY 408

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +I+A  ++G ++EA   F  ++  G+ P + T+NT+I G    GK + +   L+ M  
Sbjct: 409 NVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVS 468

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G   P+  TY+  +   C  K   E  + + +M    +KP  V Y  +     +     
Sbjct: 469 AG-CAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYG 527

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A  +  +M   G  P+  T    +  YC EG++ EA      MK+ G+  + + +N LI
Sbjct: 528 LATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLI 587

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM-----------------NAWSTAGF 368
            G   I   D    +L  M      P+  T+  ++                 + W T   
Sbjct: 588 DGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIEL 647

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
            D   E+F+ M K  +   A AY  + +G+  E+  ++   L+  M E     N  I+T+
Sbjct: 648 AD-VFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTS 706

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +++ +C       A  +   M  HG  PNL +++ L+ G++   Q  RA+EI + ++
Sbjct: 707 LVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLR 763



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 85/338 (25%), Positives = 152/338 (44%), Gaps = 39/338 (11%)

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           T+ +L+  +         ++L   M   G   P   TYN L+RA C   ++  A   +  
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  SG +PD  T+N++   Y +  + D A+++  +M   G   +  +   +I G+C+ G+
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           + EAL   R +++    P++     L+KG  +   R G + +  L K             
Sbjct: 215 VDEALELFRELEQ----PDMYTHAALVKGLCDA--RRGEEGLYMLQK------------- 255

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
                               M + G +P   AY+ L   + REQ+ E+AE++L  M ++G
Sbjct: 256 --------------------MKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNG 295

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P  V  T +++ +C +G M  A+ VF+ M   G  PN+ T+  ++ G+    + ++A 
Sbjct: 296 LVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAM 355

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
            +L  M+  GV P   T+ LL   +   G  + A R+L
Sbjct: 356 ALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLL 393



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/340 (19%), Positives = 140/340 (41%), Gaps = 19/340 (5%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + +  + +L +    +E  +  + +++   KPS V YT ++  L  ++ +     I  Q+
Sbjct: 477 TYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQM 536

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  PD + +   + A+   G + EA +   +MK+ G+      YNTLI G+   GK 
Sbjct: 537 VSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKT 596

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVL-----------------VRAWCNEKNITEAWNVM 236
           + +V +L  M+   ++ PN  T+ +L                    W     + + + + 
Sbjct: 597 DHAVTILKHMTGVASM-PNHFTFFILLRHLLQRRLAEDVPLKTTSVW-KTIELADVFELF 654

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
             M  + +      Y  I   +++    D+   ++  M+ + +  N      +++ +CK 
Sbjct: 655 ELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKL 714

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
               +A     +M  +G  PNL+ +  L+ GF      D   E+   ++    N D I +
Sbjct: 715 RMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGLRWKEYNTDEIVW 774

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             I++     G  D C ++   + +   KP    Y++L +
Sbjct: 775 KIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTE 814


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 206/415 (49%), Gaps = 9/415 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLI-EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           + T L+  L    K ++A  +F  L+ E   +P+ V Y T++  L  +        ++  
Sbjct: 144 TFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRL 203

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +E+    P++  +  VI+AF + G ++ A     +MK+  + P   TY+TLI       +
Sbjct: 204 MEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQ 263

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             E+V+ L L     N+ PN+ T+N ++   C E  + +A  +M  M   G+ PDV+TYN
Sbjct: 264 -WENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYN 322

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            I   Y   G+ D+A E+   M +  ++P+  +  I+I+GY ++ KI EA++  R + + 
Sbjct: 323 MIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQK 382

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ P++V  N+L+ G  E+            M      PD+ T+ T++  +   G +++ 
Sbjct: 383 GLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEA 442

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
              F  + +     +   Y+ +  G  +  + +KA      +   G HP+V+ +T +ISG
Sbjct: 443 MSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISG 502

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           +C +G +D A ++  KM ++G   + +T+  ++ G+       R+ ++ + MKAF
Sbjct: 503 YCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF------LRSNKVSE-MKAF 550



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/471 (22%), Positives = 230/471 (48%), Gaps = 15/471 (3%)

Query: 61  SFCMNKESCRT-----VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLA 115
           +F + ++  RT     V S +KL+ +++         ++F  +    HK  +  +  +L+
Sbjct: 56  AFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREI----HKLRIPVHEFILS 111

Query: 116 ALT----IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM-KE 170
            +     +  R +   S+++   + G+  + + F  +I        +++A+  F K+ +E
Sbjct: 112 IVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRE 171

Query: 171 SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNIT 230
           +   P    Y T++ G    G  +++  LL LM  +G+ KPN RTY +++ A+C +  + 
Sbjct: 172 NICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLME-QGSTKPNTRTYTIVIDAFCKDGMLD 230

Query: 231 EAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
            A +++++M    + PD+ TY+T+  A  +  + +    + +EM H  + PN  T   +I
Sbjct: 231 GATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVI 290

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
            G CKEGK+++A    R M E GV P+++ +N++I G+      D   E+   M    + 
Sbjct: 291 DGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIE 350

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           PD+I+Y+ ++N ++    +D+  ++  ++ + G+KP     ++L  G       + A+  
Sbjct: 351 PDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNF 410

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
              M+ +G  P++    T++ G+  +G ++ A+  F K+       N++ +  ++ G  +
Sbjct: 411 FDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCK 470

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             +  +A    + +   G+HP   T+  +       GL  EAK +L K+++
Sbjct: 471 NGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMED 521



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 172/339 (50%), Gaps = 1/339 (0%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+ T ++++  + G    A ++ N + +    P + TY+TL+ AL    ++ ++ ++  +
Sbjct: 214 RTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLE 273

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +    + P+   FN+VI+   + G +E+A +    M E G+ P   TYN +I GYG+ G+
Sbjct: 274 MIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQ 333

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            + + ++ D M  + +++P++ +YN+L+  +  +K I EA  V  +++  G+KP +VT N
Sbjct: 334 VDRAREIFDSMINK-SIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCN 392

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +     + G    A+    EM   G  P+  T   ++ GY K G ++EA+     ++  
Sbjct: 393 VLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERR 452

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
               N+ I+  +I G  +    D        +    ++PDVITY+ +++ +   G +D+ 
Sbjct: 453 REDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEA 512

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELL 411
           K++   M   G   D   Y+++ +G++R  +  + +  L
Sbjct: 513 KDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFL 551



 Score = 85.9 bits (211), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/216 (26%), Positives = 96/216 (44%), Gaps = 2/216 (0%)

Query: 46  YSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKP 105
           Y+  K  D   Q  C     K    ++ +   L++ L E G+ + AQ  F+ ++  GH P
Sbjct: 363 YARQKKIDEAMQV-CREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIP 421

Query: 106 SLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
            L T+ TLL             S   ++E    D +   + AVI+   ++G +++A  TF
Sbjct: 422 DLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATF 481

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
            K+   GL P   TY  +I GY   G  +E+  +L  M   G +  N RTYNV+VR +  
Sbjct: 482 EKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADN-RTYNVIVRGFLR 540

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQN 261
              ++E    + ++A      +  T   +    A++
Sbjct: 541 SNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAED 576



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 51/211 (24%), Positives = 95/211 (45%), Gaps = 1/211 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +NK     + S   L+N    + K  EA  +   + + G KPS+VT   LL  L    R 
Sbjct: 345 INKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRT 404

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            S  +   ++   G  PD      ++  + ++G +EEAM  F K++          Y  +
Sbjct: 405 KSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAV 464

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G    GK +++    + +   G + P++ TY  ++  +C E  + EA +++ KM  +G
Sbjct: 465 IDGLCKNGKLDKAHATFEKLPLIG-LHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNG 523

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
              D  TYN I   + ++ +  + +  + E+
Sbjct: 524 CLADNRTYNVIVRGFLRSNKVSEMKAFLEEI 554


>gi|449444522|ref|XP_004140023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 783

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 195/408 (47%), Gaps = 17/408 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L +  K Q+A  +F+ + + G  P+ + Y+ +L+ L   K+      + S++  +G
Sbjct: 204 LIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASG 263

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            + D I +N ++N F +SG +++A      + + G       Y  LI G   A + EE+ 
Sbjct: 264 CNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAH 323

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M RE N+KP++  Y +++R    E  +TEA  ++ +M   G++PD + YN +   
Sbjct: 324 MWYQKMLRE-NIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKG 382

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           +   G  D+AE + +E+  +   PN  T  I+I G CK G I +A    + M++ G  P+
Sbjct: 383 FCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPS 442

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP--------------DVITYSTIMNAW 363
           +V FN LI G  +  +R     +L    E    P              D+ +   +M   
Sbjct: 443 VVTFNSLINGLCK-ANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERL 501

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
             +G + K  ++   +  +G+ PD   Y+IL  G+ +      A +L   M   G  P+ 
Sbjct: 502 CESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDS 561

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM-WGYSE 470
           V + T+I G    G  + A+E+F++M + G  P   T++T+M W   E
Sbjct: 562 VTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRE 609



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 165/342 (48%), Gaps = 5/342 (1%)

Query: 159 EEAMDTFWK----MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
           E A + +WK    +K S +  ++  ++ LI+ Y  AG  E++V+   LM R+ + KP+L 
Sbjct: 106 ENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLM-RDFDCKPDLF 164

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
            +N+++     ++    A  V ++M    + PDVVTY  +     +  +   A  +  EM
Sbjct: 165 AFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEM 224

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G+ PN     I++SG C+  KI +A R    M+  G + +L+ +N+L+ GF +    
Sbjct: 225 TDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYL 284

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           D    +L L+ +      VI Y  ++N    A   ++    +  M +  IKPD   Y+I+
Sbjct: 285 DDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIM 344

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            +G  +E    +A  LL  M E G  P+ + +  +I G+C  G +D A  +  ++ +H  
Sbjct: 345 IRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDC 404

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            PN  T+  L+ G  +     +A+ I + M+  G  P   TF
Sbjct: 405 FPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTF 446



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 110/502 (21%), Positives = 202/502 (40%), Gaps = 119/502 (23%)

Query: 113 LLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE-- 170
           ++  L  +  F     ++ +++ + +   S  F+ +I A+SE+G  E+A+++F  M++  
Sbjct: 99  IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFGLMRDFD 158

Query: 171 ---------------------------------SGLTPTTSTYNTLIKGYGIAGKPEESV 197
                                              L P   TY  LI G     K ++++
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L D M+  G + PN   Y++++   C  K I +A  +  KM ASG   D++TYN +   
Sbjct: 219 VLFDEMTDRG-ILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNG 277

Query: 258 YAQNGEADQAEEVIVEMEHNG-----------------------------------VQPN 282
           + ++G  D A  ++  +  +G                                   ++P+
Sbjct: 278 FCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPD 337

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
                I+I G  +EG++ EAL     M E G+ P+ + +N LIKGF ++   D  + +  
Sbjct: 338 VMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRL 397

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            + +    P+  TYS ++      G ++K + IF +M K G  P    ++ L  G  +  
Sbjct: 398 EISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKAN 457

Query: 403 EPE------------------------------------------------KAEELLMTM 414
             E                                                KA +LLM +
Sbjct: 458 RLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQL 517

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           ++SG  P++  +  +I+G+C  G+++ A ++F +M   G  P+  T+ TL+ G   A + 
Sbjct: 518 VDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRN 577

Query: 475 WRAEEILQIMKAFGVHPQKSTF 496
             A EI + M   G  P+ ST+
Sbjct: 578 EDALEIFEQMVKKGCVPESSTY 599



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 105/455 (23%), Positives = 200/455 (43%), Gaps = 26/455 (5%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M    C R + +   L+N   + G   +A  +   L + GH   ++ Y  L+  L   +R
Sbjct: 259 MRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARR 318

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +   H    ++    + PD + +  +I   S+ G + EA+    +M E GL P T  YN 
Sbjct: 319 YEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNA 378

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LIKG+   G  +E+  L   +S+  +  PN  TY++L+   C    I +A ++  +M   
Sbjct: 379 LIKGFCDMGYLDEAESLRLEISKH-DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKL 437

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEME-----------HNGVQP--NGRTCGII 289
           G  P VVT+N++     +    ++A  +  +ME             G     +  +  ++
Sbjct: 438 GCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVM 497

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           +   C+ G I +A +    + + GV P++  +N+LI GF +  + +G      L KE ++
Sbjct: 498 MERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNING---AFKLFKEMQL 554

Query: 350 N---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
               PD +TY T+++    AG  +   EIF+ M K G  P++  Y  +     RE     
Sbjct: 555 KGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISL 614

Query: 407 AEELLMTMIES--GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           A  + M  +    G+    V    +++    +  +  AI    +M     + +L  +   
Sbjct: 615 ALSVWMKYLRDFRGWEDEKV---RVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIF 671

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           + G  +A++   A  I  ++K F ++   ++ ++L
Sbjct: 672 LIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVML 706



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 2/202 (0%)

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI-MDRDGVDEVLALMKE 346
           +II    KE   +   +  + +K   +  +   F++LI+ + E  MD   V E   LM++
Sbjct: 98  LIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAV-ESFGLMRD 156

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
           F   PD+  ++ I++             +++ M K  + PD   Y IL  G  +  + + 
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  L   M + G  PN +I++ ++SG C    +  A  +F KM   G + +L T+  L+ 
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 467 GYSEARQPWRAEEILQIMKAFG 488
           G+ ++     A  +LQ++   G
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDG 298


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 205/417 (49%), Gaps = 7/417 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + TKL++ L + G+ ++A  +   ++   H P   T T ++ +L +  R +    ++ ++
Sbjct: 151 TYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEM 210

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFW-KMKESGLTPTTSTYNTLIKGYGIAGK 192
              GM  ++I ++A+++   +   ++EA+     ++   G TP   TY+T+I G   AG+
Sbjct: 211 LHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGR 270

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             ++V + + MS      P   TYN L+  +C   ++ EA  ++ KM      PDV+TY 
Sbjct: 271 LRDAVDIFEEMS----CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYT 326

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+ +A+ + G  D A E+  +M  N + P+  T   ++ G C EG++++AL     +   
Sbjct: 327 TLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRR 386

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G  P +  +N ++ G+ +       +E++A  +     P+ +TY+ ++     AG  D+ 
Sbjct: 387 GCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQA 446

Query: 373 KEIFDDM-GKAGIKPDAHA-YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
            +  D +  + G  P + A Y+I+     R+   + A +    MI+ G+ P    F T++
Sbjct: 447 LQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVV 506

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
              C      +A E+ ++M ++G +P   T + ++  Y  A    +A+E+   ++ +
Sbjct: 507 FALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELRLY 563



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/519 (22%), Positives = 221/519 (42%), Gaps = 79/519 (15%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           +  ++  L +      A A+F+ + E G   +  TY  L+  L   +  +    ++  ++
Sbjct: 49  LNTILAELCDARDTTTAMALFDKMAELG-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMK 107

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             GM+P ++  N VI     +G +  A+  + +M ++   P   TY  L+ G   AG+  
Sbjct: 108 SRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKAGRLR 166

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++V++L  M    +V P+  T  V+V++ C    + +A  ++ +M   GM  + +TY+ +
Sbjct: 167 DAVQVLQEMVSARHV-PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSAL 225

Query: 255 ATAYAQNGEADQAEEVIV-EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
                +    D+A  +++ E+   G  P+  T   +I G CK G++++A+      +E  
Sbjct: 226 VDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDI---FEEMS 282

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P  + +N LI G+    D D    +L  M +    PDVITY+T+M+A+   G +D   
Sbjct: 283 CAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAY 342

Query: 374 EIFDDM-----------------------------------GKAGIKPDAHAYSILAKGY 398
           E+F  M                                    + G  P  + Y+ +  GY
Sbjct: 343 ELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGY 402

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISG-------------------------- 432
            +  +  KAEEL+      GF PN V +  +++G                          
Sbjct: 403 CKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPT 462

Query: 433 -----------WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
                       C DG  D A++ +++M + G  P   TF T+++   +A QP +A E+L
Sbjct: 463 SVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELL 522

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           + M  +G  P   T   +  A    G+ ++A  + S+++
Sbjct: 523 EEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 202/431 (46%), Gaps = 9/431 (2%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           + + + + G  P  V   T+LA L   +   +  ++  ++ E G    + ++N +I+   
Sbjct: 33  LLDEIRDRGLSPDPVELNTILAELCDARDTTTAMALFDKMAELGAVNHTTYYN-LIHPLC 91

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           ++  ++EAM     MK  G+ P T  +N +I G   AG+   ++ +   M+      P+ 
Sbjct: 92  KARLLDEAMGLLLDMKSRGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH--PPDF 149

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            TY  LV        + +A  V+ +M ++   PD  T   +  +       D A E++ E
Sbjct: 150 LTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEE 209

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR-TMKEYGVHPNLVIFNLLIKGFVEIM 332
           M H G+  N  T   ++ G CK  ++ EA+      +   G  P++V ++ +I G  +  
Sbjct: 210 MLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAG 269

Query: 333 D-RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
             RD VD    + +E    P  ITY++++  +  AG MD+   +   M      PD   Y
Sbjct: 270 RLRDAVD----IFEEMSCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITY 325

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + L   + +    + A EL   M+ +   P+VV FT+++ G C +G M+ A+E+ +++  
Sbjct: 326 TTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITR 385

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
            G  P + T+  ++ GY ++ Q  +AEE++   ++ G  P   T+ +L       G T +
Sbjct: 386 RGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQ 445

Query: 512 AKRILSKIKNK 522
           A + L ++ ++
Sbjct: 446 ALQYLDQLNSE 456



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 171/390 (43%), Gaps = 39/390 (10%)

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           M ++G    +ST+  +++G   + K      LL    R+  + P+    N ++   C+ +
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           + T A  +  KMA  G       YN I     +    D+A  ++++M+  G+ P      
Sbjct: 61  DTTTAMALFDKMAELGAVNHTTYYNLI-HPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVH-PNLVIFNLLIKGFVEIMD-RDGVDEVLALMK 345
           ++I G C+ G+++ AL   R M +   H P+ + +  L+ G  +    RD V +VL  M 
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQMND--AHPPDFLTYTKLVHGLSKAGRLRDAV-QVLQEMV 176

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
             R  PD  T + ++ +      +D  +E+ ++M   G+  +A  YS L  G  + +  +
Sbjct: 177 SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 236

Query: 406 KAEELLMTMI-ESGFHPNVVIFTTIIS--------------------------------G 432
           +A  LL+  +   GF P++V ++T+I                                 G
Sbjct: 237 EAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAITYNSLIGG 296

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C  G MD AI +  KM +   +P++ T+ TLM  + +  +   A E+ Q M A  + P 
Sbjct: 297 YCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPD 356

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             TF  L +     G  ++A  +L +I  +
Sbjct: 357 VVTFTSLVDGLCGEGRMEDALELLEEITRR 386



 Score =  122 bits (305), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 119/242 (49%), Gaps = 1/242 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T LM++  + G+  +A  +F  ++     P +VT+T+L+  L  + R      ++ 
Sbjct: 322 VITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLE 381

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  P    +N V++ + +S  + +A +     +  G  P T TYN L+ G   AG
Sbjct: 382 EITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAG 441

Query: 192 KPEESVKLLDLMSREGNVKP-NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           + +++++ LD ++ EG   P ++  Y +++ A C +    +A     +M   G  P   T
Sbjct: 442 RTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAAT 501

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           + T+  A  +  +  QA E++ EM   G  P   TC  ++S YC+ G I++A   A  ++
Sbjct: 502 FATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASELR 561

Query: 311 EY 312
            Y
Sbjct: 562 LY 563


>gi|242038885|ref|XP_002466837.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
 gi|241920691|gb|EER93835.1| hypothetical protein SORBIDRAFT_01g014995 [Sorghum bicolor]
          Length = 1014

 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 208/441 (47%), Gaps = 28/441 (6%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE--- 134
           L+N     GK   A  +FN+++     PS+ TYTT++      +R +   S++S+++   
Sbjct: 333 LINGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITG 392

Query: 135 -----------------ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT 177
                            E+G+DPD + ++A+IN     G + EA      M    ++  +
Sbjct: 393 VMPSEISKAKQILKSMLEDGIDPDIVTYSALIN----EGMITEAEHFRQYMSRMKISFDS 448

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
            ++N +I  Y   G   E+  + D M R G+  PN+ TY  L+R  C   ++ +A   M 
Sbjct: 449 VSFNCIIDSYCHRGNIVEAFTVYDAMVRYGH-SPNVCTYQNLLRGLCQGGHLVQAKQFMF 507

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
            +       D  T+N +     + G  D+A ++  +M  N   P+  T  I++SG+C++G
Sbjct: 508 CLLDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKG 567

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL--ALMKEFRVNPDVIT 355
           KI  AL   + M + GV P+ V +  L+ G +          V    + KE  +  D I 
Sbjct: 568 KILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKE-GLYADCIA 626

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMI 415
           Y+++MN +   G ++  K +  DM ++ + P++ +Y+IL  GYV+  +  K+  L   M+
Sbjct: 627 YNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMV 686

Query: 416 ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW 475
             G  P+ V +  +I G    G +D A++  +KM   G+ P+   F+ L+  +SE  +  
Sbjct: 687 RKGIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMH 746

Query: 476 RAEEILQIMKAFGVHPQKSTF 496
            A ++   MK   + P   T+
Sbjct: 747 NALQLFNCMKWLRMSPSSKTY 767



 Score =  165 bits (417), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 109/441 (24%), Positives = 201/441 (45%), Gaps = 7/441 (1%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   +++S   RG   EA  +++ ++  GH P++ TY  LL  L            M  +
Sbjct: 450 SFNCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCL 509

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            +     D   FNA++    + G ++EA+D   KM ++   P   TY  L+ G+   GK 
Sbjct: 510 LDIPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKI 569

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYN 252
             ++ +L +M  +G V P+   Y  L+    NE  +  A  V  ++    G+  D + YN
Sbjct: 570 LPALIMLQMMLDKG-VVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYN 628

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++   Y + G  +  + ++ +M  + V PN  +  I++ GY K G+  ++L   + M   
Sbjct: 629 SLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRK 688

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ P+ V + LLI G  E    D   + L  M    + PD + +  ++ A+S    M   
Sbjct: 689 GIRPDNVTYRLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNA 748

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            ++F+ M    + P +  YS +  G +R+   +++ E+L  M++ G  PN   +  +++ 
Sbjct: 749 LQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNA 808

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G +DRA  + ++M   G+ P      +++ G  +  +   A  +   M   G+ P 
Sbjct: 809 KCRVGKIDRAFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPT 868

Query: 493 KSTFLLLAEARRATGLTKEAK 513
            +TF  L        L KE+K
Sbjct: 869 VATFTTLMHC-----LCKESK 884



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 101/451 (22%), Positives = 213/451 (47%), Gaps = 2/451 (0%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           ++   L+  + + G   EA  +   +++    P + TYT LL+    + +      ++  
Sbjct: 519 KTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQM 578

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK-ESGLTPTTSTYNTLIKGYGIAG 191
           + + G+ PD++ +  ++N     G ++ A   F ++  + GL      YN+L+ GY   G
Sbjct: 579 MLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGG 638

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
                 +++  M  +  V PN  +YN+L+  +      +++  +   M   G++PD VTY
Sbjct: 639 NINTIKRMMSDMY-QSEVYPNSASYNILMHGYVKGGQFSKSLYLYKYMVRKGIRPDNVTY 697

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +    ++ G  D A + + +M   G+ P+     I+I+ + ++ K+  AL+    MK 
Sbjct: 698 RLLILGLSECGLIDIAVKFLEKMVLEGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKW 757

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             + P+   ++ +I G +     D   EVL  M +  + P+   Y  ++NA    G +D+
Sbjct: 758 LRMSPSSKTYSAMINGLIRKNYLDQSHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDR 817

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + ++M   GI P   A S + +G  +  + E+A  +  TM+ SG  P V  FTT++ 
Sbjct: 818 AFRLKEEMKALGIVPADVAESSIIRGLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMH 877

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
             C +  +  A+ +   M    +  ++ ++  L+ G  + ++   A ++ + MK+ G+ P
Sbjct: 878 CLCKESKIADALHLKRLMESCRLKVDVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWP 937

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             +T++ L  A  +TG+ +  + +L  I+ +
Sbjct: 938 NVTTYITLTGAMYSTGIMQNGEELLEDIEER 968



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 107/476 (22%), Positives = 219/476 (46%), Gaps = 9/476 (1%)

Query: 64   MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
            M K +C   + + T L++    +GK   A  +   +++ G  P  V YT LL  L  + +
Sbjct: 544  MVKNNCLPDIHTYTILLSGFCRKGKILPALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQ 603

Query: 123  FNSIHSIMSQVE-ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
              +   +  ++  + G+  D I +N+++N + + GN+         M +S + P +++YN
Sbjct: 604  VKAASYVFQEIICKEGLYADCIAYNSLMNGYLKGGNINTIKRMMSDMYQSEVYPNSASYN 663

Query: 182  TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
             L+ GY   G+  +S+ L   M R+G ++P+  TY +L+        I  A   + KM  
Sbjct: 664  ILMHGYVKGGQFSKSLYLYKYMVRKG-IRPDNVTYRLLILGLSECGLIDIAVKFLEKMVL 722

Query: 242  SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
             G+ PD + ++ + TA+++  +   A ++   M+   + P+ +T   +I+G  ++  + +
Sbjct: 723  EGIFPDRLVFDILITAFSEKSKMHNALQLFNCMKWLRMSPSSKTYSAMINGLIRKNYLDQ 782

Query: 302  ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
            +    R M + G+ PN   +  L+     +   D    +   MK   + P  +  S+I+ 
Sbjct: 783  SHEVLREMLQVGLQPNHTHYIALVNAKCRVGKIDRAFRLKEEMKALGIVPADVAESSIIR 842

Query: 362  AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                 G +++   +F  M ++G+ P    ++ L     +E +   A  L   M       
Sbjct: 843  GLCKCGKLEEAVIVFSTMMRSGMVPTVATFTTLMHCLCKESKIADALHLKRLMESCRLKV 902

Query: 422  NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            +VV +  +I+G C D  +  A++++++M   G+ PN+ T+ TL             EE+L
Sbjct: 903  DVVSYNVLITGLCKDKRISDALDLYEEMKSKGLWPNVTTYITLTGAMYSTGIMQNGEELL 962

Query: 482  QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVE 537
            + ++  G+ P    ++ L    R     ++A R L+ I+N  +       E +PV+
Sbjct: 963  EDIEERGLIP---VYVQLENLERQ---MEDAIRRLNMIRNCRKEVPFRGVELLPVD 1012



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 102/467 (21%), Positives = 211/467 (45%), Gaps = 28/467 (5%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ + ++  K  +A      + + G K S +   T+L AL  Q     +   + +   + 
Sbjct: 159 LVKAYVKERKVLDAAVAVLFMDDCGFKASPIACNTILRALVEQGESKYVWLFLRESLAHN 218

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              D    N ++N+   +G   +A D   KMK   L+ +  TYNT++  Y   G+ + ++
Sbjct: 219 FPLDVTTCNILLNSLCTNGEFRKAEDMLQKMKTCRLSNSV-TYNTILHWYVKKGRFKAAL 277

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L+ M R+ ++  ++ TYN+++   C  K    A+ ++ +M    + PD  TYNT+   
Sbjct: 278 CVLEDMERD-SIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLING 336

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL-------------- 303
           +   G+ + A  V   M      P+  T   +I GYC+  +I +AL              
Sbjct: 337 FFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVMPS 396

Query: 304 ------RFARTMKEYGVHPNLVIFNLLI-KGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
                 +  ++M E G+ P++V ++ LI +G +        +     M   +++ D +++
Sbjct: 397 EISKAKQILKSMLEDGIDPDIVTYSALINEGMIT-----EAEHFRQYMSRMKISFDSVSF 451

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           + I++++   G + +   ++D M + G  P+   Y  L +G  +     +A++ +  +++
Sbjct: 452 NCIIDSYCHRGNIVEAFTVYDAMVRYGHSPNVCTYQNLLRGLCQGGHLVQAKQFMFCLLD 511

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
                +   F  ++ G C  G++D A+++ +KM ++   P++ T+  L+ G+    +   
Sbjct: 512 IPSAIDEKTFNALLLGICKYGTLDEALDLCEKMVKNNCLPDIHTYTILLSGFCRKGKILP 571

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           A  +LQ+M   GV P    +  L       G  K A  +  +I  KE
Sbjct: 572 ALIMLQMMLDKGVVPDTVAYTCLLNGLINEGQVKAASYVFQEIICKE 618



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 76/363 (20%), Positives = 152/363 (41%), Gaps = 55/363 (15%)

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S VE +G+D  +  +   +    ++    +AM    ++   G +  T+ + +L++     
Sbjct: 90  SIVERSGLDRITYIYCMAVPILIQAQMHSQAMSVLRRLAVMGFS-CTAIFTSLLR----- 143

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
                      ++SR  +   N   + +LV+A+  E+ + +A   +  M   G K   + 
Sbjct: 144 -----------IISRFDST--NHVVFELLVKAYVKERKVLDAAVAVLFMDDCGFKASPIA 190

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            NTI  A  + GE+      + E   +    +  TC I+++  C  G+ ++A        
Sbjct: 191 CNTILRALVEQGESKYVWLFLRESLAHNFPLDVTTCNILLNSLCTNGEFRKA-------- 242

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                                      +++L  MK  R++  V TY+TI++ +   G   
Sbjct: 243 ---------------------------EDMLQKMKTCRLSNSV-TYNTILHWYVKKGRFK 274

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               + +DM +  I  D + Y+I+     R +   +A  LL  M +    P+   + T+I
Sbjct: 275 AALCVLEDMERDSIPADIYTYNIMIDKLCRIKRSARAFLLLKRMRKDDLIPDECTYNTLI 334

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           +G+  +G ++ A  VF+ M      P++ T+ T++ GY   R+  +A  +L  M+  GV 
Sbjct: 335 NGFFGEGKINHAHYVFNHMLRQTFVPSVATYTTMIDGYCRNRRIDKALSVLSEMQITGVM 394

Query: 491 PQK 493
           P +
Sbjct: 395 PSE 397


>gi|148906470|gb|ABR16388.1| unknown [Picea sitchensis]
          Length = 700

 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 185/379 (48%), Gaps = 1/379 (0%)

Query: 81  SLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDP 140
           SL++  K   A+ +F  +I  G   + +TYT+++    ++++      ++  + +N   P
Sbjct: 297 SLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAP 356

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           D + +  VI+A  +   +E+A     KM+E+G  P   TYN LI+G     +PEE+++L+
Sbjct: 357 DVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELV 416

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
            LM  +G V PN+ TY +L    C  + +  A  + ++  A G+KP+ VTYNT+   Y +
Sbjct: 417 TLME-QGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGYCR 475

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
                +A +++ EM  N   P+  T   +I G  +  ++ +ALR    M+  G   N   
Sbjct: 476 GSRLIEAMDILKEMHQNDCTPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDT 535

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
            N+L +G   + +          MK+         Y   ++  STAG M++ + +  +M 
Sbjct: 536 LNILARGLARVGNHKDASIFYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMI 595

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             G  P+   Y+ + KG+ R+   + A+ +L  MIE+G  P+   +  +I  + + G   
Sbjct: 596 NKGYSPNLTTYNTMIKGFCRQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQ 655

Query: 441 RAIEVFDKMCEHGVSPNLK 459
            A +++    E GV  N K
Sbjct: 656 DADQLYATALERGVVLNPK 674



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 192/404 (47%), Gaps = 15/404 (3%)

Query: 122 RFNSIHSIMSQVEENGMDPDSI--FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
           RF       + ++E G +P  I   +N+V+ +  ++  ++ A + F +M  +G++    T
Sbjct: 266 RFKESLEAFNLMKEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLT 325

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           Y ++I+ + +  K E+++KLLD M  + N  P++ TY +++ A C  K I +A+ V+ KM
Sbjct: 326 YTSMIQCFFLKEKMEDAMKLLDDMI-QNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKM 384

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
             +G +P++ TYN +          ++A E++  ME  GV PN  T  I+  G CK  ++
Sbjct: 385 RENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRL 444

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGF------VEIMDRDGVDEVLALMKEFRVNPDV 353
             A          G+ PN V +N L+ G+      +E MD      +L  M +    PD 
Sbjct: 445 DRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMD------ILKEMHQNDCTPDH 498

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           +TY+T++        +     + D+M   G   +    +ILA+G  R    + A      
Sbjct: 499 VTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRR 558

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M + GF  +   +   I    + G M+ A  +  +M   G SPNL T+ T++ G+    +
Sbjct: 559 MKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGR 618

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
              A+ +L  M   G+ P   ++ +L +     G T++A ++ +
Sbjct: 619 LDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYA 662



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 95/363 (26%), Positives = 175/363 (48%), Gaps = 4/363 (1%)

Query: 65  NKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           N  SC  + + T ++     + K ++A  + +++I+  + P +VTYT +++AL  +K   
Sbjct: 317 NGVSCNNL-TYTSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIE 375

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
             + ++ ++ ENG +P+   +NA+I         EEA++    M++ G+ P   TY  L 
Sbjct: 376 QAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILT 435

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
            G     + + + ++ +     G +KPN  TYN L+  +C    + EA +++ +M  +  
Sbjct: 436 HGLCKLRRLDRAKEMFNEALARG-LKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDC 494

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
            PD VTY T+     Q  +   A  +  EME+ G   N  T  I+  G  + G  K+A  
Sbjct: 495 TPDHVTYTTLIQGLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASI 554

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
           F R MK+ G   +   + L I       + +    +L  M     +P++ TY+T++  + 
Sbjct: 555 FYRRMKDRGFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFC 614

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG--FHPN 422
             G +D    + + M + GI PD  +Y+IL K +  +   + A++L  T +E G   +P 
Sbjct: 615 RQGRLDDADAMLNFMIENGIGPDTGSYNILIKEFHNQGRTQDADQLYATALERGVVLNPK 674

Query: 423 VVI 425
            VI
Sbjct: 675 PVI 677



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 184/391 (47%), Gaps = 3/391 (0%)

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++ G D ++  +  +I+    +    E      KM+  G   T S  ++ +  YG +G+ 
Sbjct: 208 KQEGYDHNTDAYFTMIDILGRAKMFTELQSLLQKMQTQGREITRSMLHSFVMSYGRSGRF 267

Query: 194 EESVKLLDLMSREGNVKPNL--RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +ES++  +LM +E   +P L    YN ++ +    K +  A N+  +M  +G+  + +TY
Sbjct: 268 KESLEAFNLM-KEMGYEPGLIDTAYNSVLVSLVKNKKLDMAENLFAQMINNGVSCNNLTY 326

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++   +    + + A +++ +M  N   P+  T  I+IS  CK   I++A    + M+E
Sbjct: 327 TSMIQCFFLKEKMEDAMKLLDDMIQNNYAPDVVTYTIVISALCKRKMIEQAYGVLQKMRE 386

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  PN+  +N LI+G   +   +   E++ LM++  V P++ TY+ + +       +D+
Sbjct: 387 NGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDR 446

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            KE+F++    G+KP+   Y+ L  GY R     +A ++L  M ++   P+ V +TT+I 
Sbjct: 447 AKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTTLIQ 506

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G      +  A+ + D+M   G   N  T   L  G +       A    + MK  G   
Sbjct: 507 GLVQGNQLPDALRMHDEMENKGYDVNFDTLNILARGLARVGNHKDASIFYRRMKDRGFAY 566

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             S + L        G  +EA+ +L ++ NK
Sbjct: 567 SASDYYLAIHCLSTAGEMEEAQALLYEMINK 597



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/266 (25%), Positives = 125/266 (46%), Gaps = 2/266 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C   + +   L+  L    +P+EA  +   + +GG  P++ TYT L   L   +R
Sbjct: 384 MRENGCEPNIYTYNALIQGLCAVRRPEEALELVTLMEQGGVPPNIYTYTILTHGLCKLRR 443

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    + ++    G+ P+ + +N ++N +     + EAMD   +M ++  TP   TY T
Sbjct: 444 LDRAKEMFNEALARGLKPNRVTYNTLLNGYCRGSRLIEAMDILKEMHQNDCTPDHVTYTT 503

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI+G     +  +++++ D M  +G    N  T N+L R      N  +A     +M   
Sbjct: 504 LIQGLVQGNQLPDALRMHDEMENKG-YDVNFDTLNILARGLARVGNHKDASIFYRRMKDR 562

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G       Y       +  GE ++A+ ++ EM + G  PN  T   +I G+C++G++ +A
Sbjct: 563 GFAYSASDYYLAIHCLSTAGEMEEAQALLYEMINKGYSPNLTTYNTMIKGFCRQGRLDDA 622

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGF 328
                 M E G+ P+   +N+LIK F
Sbjct: 623 DAMLNFMIENGIGPDTGSYNILIKEF 648



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/263 (26%), Positives = 123/263 (46%), Gaps = 15/263 (5%)

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV--IFNL 323
           Q  E+   M H+ V   GR+           G+ KE+L     MKE G  P L+   +N 
Sbjct: 245 QGREITRSMLHSFVMSYGRS-----------GRFKESLEAFNLMKEMGYEPGLIDTAYNS 293

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           ++   V+    D  + + A M    V+ + +TY++++  +     M+   ++ DDM +  
Sbjct: 294 VLVSLVKNKKLDMAENLFAQMINNGVSCNNLTYTSMIQCFFLKEKMEDAMKLLDDMIQNN 353

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
             PD   Y+I+     + +  E+A  +L  M E+G  PN+  +  +I G C+    + A+
Sbjct: 354 YAPDVVTYTIVISALCKRKMIEQAYGVLQKMRENGCEPNIYTYNALIQGLCAVRRPEEAL 413

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF-LLLAEA 502
           E+   M + GV PN+ T+  L  G  + R+  RA+E+     A G+ P + T+  LL   
Sbjct: 414 ELVTLMEQGGVPPNIYTYTILTHGLCKLRRLDRAKEMFNEALARGLKPNRVTYNTLLNGY 473

Query: 503 RRATGLTKEAKRILSKIKNKERT 525
            R + L  EA  IL ++   + T
Sbjct: 474 CRGSRLI-EAMDILKEMHQNDCT 495


>gi|449475988|ref|XP_004154607.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Cucumis sativus]
          Length = 950

 Score =  178 bits (452), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 195/408 (47%), Gaps = 17/408 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L +  K Q+A  +F+ + + G  P+ + Y+ +L+ L   K+      + S++  +G
Sbjct: 204 LIHGLCKTCKTQDALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASG 263

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            + D I +N ++N F +SG +++A      + + G       Y  LI G   A + EE+ 
Sbjct: 264 CNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAH 323

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M RE N+KP++  Y +++R    E  +TEA  ++ +M   G++PD + YN +   
Sbjct: 324 MWYQKMLRE-NIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKG 382

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           +   G  D+AE + +E+  +   PN  T  I+I G CK G I +A    + M++ G  P+
Sbjct: 383 FCDMGYLDEAESLRLEISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPS 442

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP--------------DVITYSTIMNAW 363
           +V FN LI G  +  +R     +L    E    P              D+ +   +M   
Sbjct: 443 VVTFNSLINGLCK-ANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERL 501

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
             +G + K  ++   +  +G+ PD   Y+IL  G+ +      A +L   M   G  P+ 
Sbjct: 502 CESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDS 561

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM-WGYSE 470
           V + T+I G    G  + A+E+F++M + G  P   T++T+M W   E
Sbjct: 562 VTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRE 609



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 165/342 (48%), Gaps = 5/342 (1%)

Query: 159 EEAMDTFWK----MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
           E A + +WK    +K S +  ++  ++ LI+ Y  AG  E++V+   LM R+ + KP+L 
Sbjct: 106 ENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLM-RDFDCKPDLF 164

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
            +N+++     ++    A  V ++M    + PDVVTY  +     +  +   A  +  EM
Sbjct: 165 AFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDALVLFDEM 224

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G+ PN     I++SG C+  KI +A R    M+  G + +L+ +N+L+ GF +    
Sbjct: 225 TDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNGFCKSGYL 284

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
           D    +L L+ +      VI Y  ++N    A   ++    +  M +  IKPD   Y+I+
Sbjct: 285 DDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPDVMLYTIM 344

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
            +G  +E    +A  LL  M E G  P+ + +  +I G+C  G +D A  +  ++ +H  
Sbjct: 345 IRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRLEISKHDC 404

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            PN  T+  L+ G  +     +A+ I + M+  G  P   TF
Sbjct: 405 FPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTF 446



 Score =  135 bits (341), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 110/502 (21%), Positives = 202/502 (40%), Gaps = 119/502 (23%)

Query: 113 LLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE-- 170
           ++  L  +  F     ++ +++ + +   S  F+ +I A+SE+G  E+A+++F  M++  
Sbjct: 99  IIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAVESFSLMRDFD 158

Query: 171 ---------------------------------SGLTPTTSTYNTLIKGYGIAGKPEESV 197
                                              L P   TY  LI G     K ++++
Sbjct: 159 CKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQDAL 218

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L D M+  G + PN   Y++++   C  K I +A  +  KM ASG   D++TYN +   
Sbjct: 219 VLFDEMTDRG-ILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLNG 277

Query: 258 YAQNGEADQAEEVIVEMEHNG-----------------------------------VQPN 282
           + ++G  D A  ++  +  +G                                   ++P+
Sbjct: 278 FCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARRYEEAHMWYQKMLRENIKPD 337

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
                I+I G  +EG++ EAL     M E G+ P+ + +N LIKGF ++   D  + +  
Sbjct: 338 VMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNALIKGFCDMGYLDEAESLRL 397

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            + +    P+  TYS ++      G ++K + IF +M K G  P    ++ L  G  +  
Sbjct: 398 EISKHDCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKLGCLPSVVTFNSLINGLCKAN 457

Query: 403 EPE------------------------------------------------KAEELLMTM 414
             E                                                KA +LLM +
Sbjct: 458 RLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVMMERLCESGMILKAYKLLMQL 517

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           ++SG  P++  +  +I+G+C  G+++ A ++F +M   G  P+  T+ TL+ G   A + 
Sbjct: 518 VDSGVLPDIRTYNILINGFCKFGNINGAFKLFKEMQLKGHMPDSVTYGTLIDGLYRAGRN 577

Query: 475 WRAEEILQIMKAFGVHPQKSTF 496
             A EI + M   G  P+ ST+
Sbjct: 578 EDALEIFEQMVKKGCVPESSTY 599



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 105/455 (23%), Positives = 200/455 (43%), Gaps = 26/455 (5%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M    C R + +   L+N   + G   +A  +   L + GH   ++ Y  L+  L   +R
Sbjct: 259 MRASGCNRDLITYNVLLNGFCKSGYLDDAFTLLQLLTKDGHILGVIGYGCLINGLFRARR 318

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           +   H    ++    + PD + +  +I   S+ G + EA+    +M E GL P T  YN 
Sbjct: 319 YEEAHMWYQKMLRENIKPDVMLYTIMIRGLSQEGRVTEALTLLGEMTERGLRPDTICYNA 378

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LIKG+   G  +E+  L   +S+  +  PN  TY++L+   C    I +A ++  +M   
Sbjct: 379 LIKGFCDMGYLDEAESLRLEISKH-DCFPNNHTYSILICGMCKNGLINKAQHIFKEMEKL 437

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEME-----------HNGVQP--NGRTCGII 289
           G  P VVT+N++     +    ++A  +  +ME             G     +  +  ++
Sbjct: 438 GCLPSVVTFNSLINGLCKANRLEEARLLFYQMEIVRKPSLFLRLSQGTDKVFDIASLQVM 497

Query: 290 ISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           +   C+ G I +A +    + + GV P++  +N+LI GF +  + +G      L KE ++
Sbjct: 498 MERLCESGMILKAYKLLMQLVDSGVLPDIRTYNILINGFCKFGNING---AFKLFKEMQL 554

Query: 350 N---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
               PD +TY T+++    AG  +   EIF+ M K G  P++  Y  +     RE     
Sbjct: 555 KGHMPDSVTYGTLIDGLYRAGRNEDALEIFEQMVKKGCVPESSTYKTIMTWSCRENNISL 614

Query: 407 AEELLMTMIES--GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
           A  + M  +    G+    V    +++    +  +  AI    +M     + +L  +   
Sbjct: 615 ALSVWMKYLRDFRGWEDEKV---RVVAESFDNEELQTAIRRLLEMDIKSKNFDLAPYTIF 671

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           + G  +A++   A  I  ++K F ++   ++ ++L
Sbjct: 672 LIGLVQAKRDCEAFAIFSVLKDFKMNISSASCVML 706



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 94/202 (46%), Gaps = 2/202 (0%)

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI-MDRDGVDEVLALMKE 346
           +II    KE   +   +  + +K   +  +   F++LI+ + E  MD   V E  +LM++
Sbjct: 98  LIIGKLIKENAFELYWKVLQELKNSAIKISSEAFSVLIEAYSEAGMDEKAV-ESFSLMRD 156

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
           F   PD+  ++ I++             +++ M K  + PD   Y IL  G  +  + + 
Sbjct: 157 FDCKPDLFAFNLILHFLVRKEAFLLALAVYNQMLKCNLNPDVVTYGILIHGLCKTCKTQD 216

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  L   M + G  PN +I++ ++SG C    +  A  +F KM   G + +L T+  L+ 
Sbjct: 217 ALVLFDEMTDRGILPNQIIYSIVLSGLCQAKKIFDAQRLFSKMRASGCNRDLITYNVLLN 276

Query: 467 GYSEARQPWRAEEILQIMKAFG 488
           G+ ++     A  +LQ++   G
Sbjct: 277 GFCKSGYLDDAFTLLQLLTKDG 298


>gi|414880311|tpg|DAA57442.1| TPA: hypothetical protein ZEAMMB73_673693 [Zea mays]
          Length = 770

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/413 (26%), Positives = 204/413 (49%), Gaps = 4/413 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   LM++L   G+ +EA  +   ++EG  +PS+VT+  L+  L   +RF  + +++
Sbjct: 250 TVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLARGQRFGEVDAVL 309

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++E  G+ P+ + +N +I      G+  EA+  F +M   G+  T  TYN + K     
Sbjct: 310 QEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKE 369

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC--NEKNITEAWNVMHKMAASGMKPDV 248
           G+ E + ++LD M   G +  +   +N +V AW       +     ++ +M A  +KP+ 
Sbjct: 370 GEMEHAEQILDEMLLAG-MTVHCSLFNSVV-AWHLRGTGRLDVVLRLIREMVARFLKPND 427

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
                      + G+ ++A E+   +   G+  N  T   +I G C+   +KEA +  + 
Sbjct: 428 AVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATKVLKA 487

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M + GV  + + +N++I+   +    +   ++   M +    PD+ T++T + A+   G 
Sbjct: 488 MVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGK 547

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           ++    + D M   G+KPD   Y  +  GY + ++  KA + L+ +I++G  PN VI+  
Sbjct: 548 VEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNA 607

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +I G+  +GS+  AI V D M  +G+ P   T+ +LM+    A     A+EI 
Sbjct: 608 LIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIF 660



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 199/405 (49%), Gaps = 8/405 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLA-ALTIQKRFNSIHS 128
           +TV +   +  +L + G+ + A+ I + ++  G       + +++A  L    R + +  
Sbjct: 354 QTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLR 413

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++ ++    + P+     A I    + G  EEA + ++ +   GL    +T N LI G  
Sbjct: 414 LIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLC 473

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
                +E+ K+L  M   G V+ +  TYN++++  C    + EA  +   M   G KPD+
Sbjct: 474 QGNNMKEATKVLKAMVDSG-VEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDL 532

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            T+NT   AY   G+ +    ++ +M+  G++P+  T G II GYCK   + +A ++   
Sbjct: 533 FTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIE 592

Query: 309 MKEYGVHPNLVIFNLLIKGFVE---IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
           + + G+ PN VI+N LI G+     I D  GV   L  MK   + P  ITY+++M     
Sbjct: 593 LIKNGLRPNAVIYNALIGGYGRNGSISDAIGV---LDTMKHNGIQPTPITYNSLMYWMCH 649

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
           AG +++ KEIF       I+     Y+I+ +G+ +  + ++A      M      PN + 
Sbjct: 650 AGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMT 709

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           +TT++  +C  G+ + A ++FD+M   G+ P+  ++ TL+ G  E
Sbjct: 710 YTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLISGCCE 754



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/341 (29%), Positives = 169/341 (49%), Gaps = 1/341 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           KP+    T  +  L  + +      I   V   G+  +    NA+I+   +  NM+EA  
Sbjct: 424 KPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVNIATSNALIHGLCQGNNMKEATK 483

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
               M +SG+     TYN +I+    A K EE+++L D M + G  KP+L T+N  +RA+
Sbjct: 484 VLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRG-FKPDLFTFNTFLRAY 542

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           CN   + +  +++ +M + G+KPD+VTY TI   Y +  +  +A + ++E+  NG++PN 
Sbjct: 543 CNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIKNGLRPNA 602

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
                +I GY + G I +A+    TMK  G+ P  + +N L+         +   E+ A 
Sbjct: 603 VIYNALIGGYGRNGSISDAIGVLDTMKHNGIQPTPITYNSLMYWMCHAGLVEEAKEIFAQ 662

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
                +   VI Y+ I+  +   G +D+    F +M    I+P+   Y+ L   Y +   
Sbjct: 663 CILKNIELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGN 722

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            E+A +L   M+ SG  P+ V + T+ISG C   S+D+ +E
Sbjct: 723 KEEAFKLFDEMVSSGIVPDTVSYNTLISGCCEVDSLDKIVE 763



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 220/455 (48%), Gaps = 7/455 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSI 129
           ++++   L+ +L   G+   A+ +F  + +G    P + TYT ++ AL      ++   +
Sbjct: 179 SIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAFVM 238

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           ++++E +G+ P  + +N +++A   SG +EEA     +M E  L P+  T+  LI G   
Sbjct: 239 LAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGLAR 298

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
             +  E   +L  M   G + PN   YN L+   C E + +EA  +  +M + G+K  VV
Sbjct: 299 GQRFGEVDAVLQEMEGFG-ITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSKGIKQTVV 357

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK-EGKIKEALRFART 308
           TYN IA A  + GE + AE+++ EM   G+  +      +++ + +  G++   LR  R 
Sbjct: 358 TYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSLFNSVVAWHLRGTGRLDVVLRLIRE 417

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV--LALMKEFRVNPDVITYSTIMNAWSTA 366
           M    + PN  +    I+   +    +   E+  L L K   VN  + T + +++     
Sbjct: 418 MVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLVLGKGLGVN--IATSNALIHGLCQG 475

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             M +  ++   M  +G++ D   Y+I+ +   +  + E+A +L   MI+ GF P++  F
Sbjct: 476 NNMKEATKVLKAMVDSGVEFDRITYNIMIQFCCKASKMEEAIQLRDDMIKRGFKPDLFTF 535

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            T +  +C+ G ++  + + D+M   G+ P++ T+ T++ GY +A+   +A + L  +  
Sbjct: 536 NTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDVHKANKYLIELIK 595

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            G+ P    +  L       G   +A  +L  +K+
Sbjct: 596 NGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKH 630



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 93/347 (26%), Positives = 168/347 (48%), Gaps = 11/347 (3%)

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN-VKPNLR 214
           G++  A D F ++   G +P+  T N L++  G  G+ + + K+   M R+GN V P++ 
Sbjct: 159 GSLSCAADAFLELSTRGASPSIKTCNILVEALGCGGQLDLARKVFGEM-RDGNAVAPDVY 217

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TY V+++A C    I  A+ ++ ++  SG++P VVTYN +  A  ++G  ++A ++   M
Sbjct: 218 TYTVMIKALCRAGEIDAAFVMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRM 277

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
               ++P+  T GI+I+G  +  +  E     + M+ +G+ PN VI+N LI        R
Sbjct: 278 VEGRLRPSIVTFGILINGLARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHC----R 333

Query: 335 DG-VDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           +G   E L L  E     +   V+TY+ I  A    G M+  ++I D+M  AG+      
Sbjct: 334 EGHCSEALRLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEQILDEMLLAGMTVHCSL 393

Query: 391 YSILAKGYVR-EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           ++ +   ++R     +    L+  M+     PN  + T  I   C  G  + A E++  +
Sbjct: 394 FNSVVAWHLRGTGRLDVVLRLIREMVARFLKPNDAVMTACIQELCKRGKHEEAAEIWFLV 453

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
              G+  N+ T   L+ G  +      A ++L+ M   GV   + T+
Sbjct: 454 LGKGLGVNIATSNALIHGLCQGNNMKEATKVLKAMVDSGVEFDRITY 500



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 70/255 (27%), Positives = 130/255 (50%), Gaps = 4/255 (1%)

Query: 87  KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           K +EA  + +++I+ G KP L T+ T L A     +   I  ++ Q++  G+ PD + + 
Sbjct: 512 KMEEAIQLRDDMIKRGFKPDLFTFNTFLRAYCNLGKVEDILHLLDQMKSEGLKPDIVTYG 571

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
            +I+ + ++ ++ +A     ++ ++GL P    YN LI GYG  G   +++ +LD M   
Sbjct: 572 TIIDGYCKAKDVHKANKYLIELIKNGLRPNAVIYNALIGGYGRNGSISDAIGVLDTMKHN 631

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G ++P   TYN L+   C+   + EA  +  +     ++  V+ Y  I   + + G+ D+
Sbjct: 632 G-IQPTPITYNSLMYWMCHAGLVEEAKEIFAQCILKNIELGVIGYTIIIQGFCKIGKIDE 690

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
           A     EM +  ++PN  T   ++  YCK G  +EA +    M   G+ P+ V +N LI 
Sbjct: 691 AVMYFKEMHYRDIRPNKMTYTTLMYAYCKCGNKEEAFKLFDEMVSSGIVPDTVSYNTLIS 750

Query: 327 GFVEIMDRDGVDEVL 341
           G  E+   D +D+++
Sbjct: 751 GCCEV---DSLDKIV 762



 Score = 79.3 bits (194), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 85/174 (48%), Gaps = 1/174 (0%)

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA-GIKPDAHAYSILAKGYVREQEPEKAE 408
           +P + T + ++ A    G +D  +++F +M     + PD + Y+++ K   R  E + A 
Sbjct: 177 SPSIKTCNILVEALGCGGQLDLARKVFGEMRDGNAVAPDVYTYTVMIKALCRAGEIDAAF 236

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            +L  +  SG  P VV +  ++   C  G ++ A ++  +M E  + P++ TF  L+ G 
Sbjct: 237 VMLAELERSGIQPTVVTYNVLMDALCRSGRVEEAFQLKGRMVEGRLRPSIVTFGILINGL 296

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +  ++    + +LQ M+ FG+ P +  +  L       G   EA R+  ++ +K
Sbjct: 297 ARGQRFGEVDAVLQEMEGFGITPNEVIYNQLIGWHCREGHCSEALRLFDEMVSK 350


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 217/450 (48%), Gaps = 3/450 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +N +   +V     ++ S+++      A ++   ++  G  PS+ T +  +         
Sbjct: 76  INMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEM 135

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
               S++  V + G  P++I    V+     +G +++AMD    +   G+      Y TL
Sbjct: 136 GFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTL 195

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNV-KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           I G    G+  ++ +LL  M  EG V KPN+  YN+++ ++C ++   +A ++  K+   
Sbjct: 196 INGLCKIGRSIDAFQLLQEM--EGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDM 253

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ PD++TY ++   + + G+  + ++++ EM +  + PN  T  ++I  +C++GK+ EA
Sbjct: 254 GIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEA 313

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 M + G  P++V FN LI G     +     ++   + E  + PDV +Y+ ++  
Sbjct: 314 QGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIG 373

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +     +D+   +F++M    +  D   YS L  G  +      A EL  T+   G  PN
Sbjct: 374 YCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPN 433

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           V+ +  +I  +C    +D  IE+F  MC  G++P + T+  L+ GY ++++   A  +L 
Sbjct: 434 VITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLS 493

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           +M++  + P   T+  L +    +G   +A
Sbjct: 494 VMQSKNLAPDSITYNSLFDGLCKSGRISDA 523



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 200/399 (50%), Gaps = 1/399 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++T +M  L   G+ Q+A    +N+   G     V Y TL+  L    R      ++ ++
Sbjct: 156 TLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEM 215

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E   + P+ + +N +I++F +     +A D + K+ + G+ P   TY +LI+G+   G+ 
Sbjct: 216 EGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQW 275

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E  +L+  M  + N+ PN+ T+NVL+ A+C +  + EA  + + M   G +PD+VT+NT
Sbjct: 276 GEVKQLMCEMVNK-NINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNT 334

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           + + +  +G   +A ++   +   G+ P+  +  I+I GYCK  +I EA+     M+   
Sbjct: 335 LISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKN 394

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           +  ++V+++ LI G  +        E+ + +      P+VITY+ +++A+     +D   
Sbjct: 395 MVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGI 454

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+F  M   G+ P    Y+IL  GY + +   +A  LL  M      P+ + + ++  G 
Sbjct: 455 ELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGL 514

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
           C  G +  A E+F  M   G   ++ T+  L+  + +A+
Sbjct: 515 CKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQ 553



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/433 (23%), Positives = 211/433 (48%), Gaps = 1/433 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A  +FN+LI     PS++ + T++ ++   K      S++ Q+   G+ P     +  I
Sbjct: 67  DAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWI 126

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           N +   G M  A      + + G  P   T  T++KG  I G+ ++++   D ++ +G +
Sbjct: 127 NCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGML 186

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
              +  Y  L+   C      +A+ ++ +M    +KP++V YN I  ++ ++    +A +
Sbjct: 187 LDEV-CYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARD 245

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           + +++   G+ P+  T   +I G+C+ G+  E  +    M    ++PN+  FN+LI  F 
Sbjct: 246 LYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFC 305

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
                     +  LM +    PD++T++T+++     G + + +++FD + + GI PD  
Sbjct: 306 RKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVW 365

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           +Y+IL  GY + +  ++A  L   M       ++V+++++I G C  G +  A E+F  +
Sbjct: 366 SYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTI 425

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G  PN+ T+  L+  + + +      E+ ++M   G+ P   T+ +L      +   
Sbjct: 426 NNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRI 485

Query: 510 KEAKRILSKIKNK 522
           +EA  +LS +++K
Sbjct: 486 REAMNLLSVMQSK 498



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 102/437 (23%), Positives = 205/437 (46%), Gaps = 11/437 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ +++  +N     G+   A ++   +++ G++P+ +T TT++  L I           
Sbjct: 118 SIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFH 177

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             V   GM  D + +  +IN   + G   +A     +M+   + P    YN +I  +   
Sbjct: 178 DNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFC-- 235

Query: 191 GKPEESVKLLDLMSR--EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            K E + K  DL  +  +  + P++ TY  L+R +C      E   +M +M    + P+V
Sbjct: 236 -KDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNV 294

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            T+N +  A+ + G+  +A+ +   M   G QP+  T   +ISG+C  G + EA +   T
Sbjct: 295 YTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDT 354

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP---DVITYSTIMNAWST 365
           + E G+ P++  + +LI G+ +      +DE ++L  E R      D++ YS++++    
Sbjct: 355 VFERGILPDVWSYTILIIGYCKC---KRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCK 411

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
           +G +    E+F  +   G  P+   Y+IL   + + Q+ +   EL   M   G  P V+ 
Sbjct: 412 SGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLT 471

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +  +I+G+C    +  A+ +   M    ++P+  T+ +L  G  ++ +   A E+ ++M 
Sbjct: 472 YNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMH 531

Query: 486 AFGVHPQKSTFLLLAEA 502
             G     +T+ +L +A
Sbjct: 532 VGGPPVDVATYNVLLDA 548



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 82/314 (26%), Positives = 159/314 (50%), Gaps = 1/314 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A+ ++  +++ G  P ++TYT+L+       ++  +  +M ++    ++P+   FN +I
Sbjct: 242 KARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLI 301

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           +AF   G M EA   F  M + G  P   T+NTLI G+ + G   E+ KL D +   G +
Sbjct: 302 DAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERG-I 360

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            P++ +Y +L+  +C  K I EA ++ ++M    M  D+V Y+++     ++G    A E
Sbjct: 361 LPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWE 420

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +   + ++G  PN  T  I+I  +CK   I   +   + M   G+ P ++ +N+LI G+ 
Sbjct: 421 LFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYC 480

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +         +L++M+   + PD ITY+++ +    +G +    E+F  M   G   D  
Sbjct: 481 KSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVA 540

Query: 390 AYSILAKGYVREQE 403
            Y++L   + + Q+
Sbjct: 541 TYNVLLDAFCKAQD 554



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 39/154 (25%), Positives = 79/154 (51%), Gaps = 1/154 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + L++ L + G+   A  +F+ +   G  P+++TY  L+ A    +  +    +   +  
Sbjct: 403 SSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCG 462

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ P  + +N +IN + +S  + EAM+    M+   L P + TYN+L  G   +G+  +
Sbjct: 463 KGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISD 522

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
           + +L  +M   G    ++ TYNVL+ A+C  +++
Sbjct: 523 AWELFKVM-HVGGPPVDVATYNVLLDAFCKAQDV 555


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 191/374 (51%), Gaps = 1/374 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +N   C  V   + L+N L   GK +EA  +F+ ++  G K +++TY +L+ A      +
Sbjct: 106 INMGICPNVIVYSSLINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLW 165

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                  SQ+   G+ PD + F  +I+  S+ G ++EA   F  M + G  P   TYN+L
Sbjct: 166 KEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSL 225

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           + G  +  + + +V+L ++M   G +K ++ +YN L+  +C      EA  +  KM    
Sbjct: 226 LNGLCLHHQMDHAVRLFEVMVERG-IKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEE 284

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           + P + TY  +  A  QNG    A+E+   M+  G  P+  T  +++ G CK G I+EA+
Sbjct: 285 LTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAI 344

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
              R++K     P++ I+++LI G  +    +   E+   +    + P+++TY+ ++N  
Sbjct: 345 DVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGL 404

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G + + + +F  M ++G + D  +++ + +G+++E + +KA E L  M E  F PN 
Sbjct: 405 CKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPND 464

Query: 424 VIFTTIISGWCSDG 437
            +   +++ + +D 
Sbjct: 465 SVTLMLVNLYAADA 478



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 104/422 (24%), Positives = 201/422 (47%), Gaps = 1/422 (0%)

Query: 99  IEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNM 158
           ++ G++P+LVT +TL+  +  + +      +  ++  +G   D + +  +INA  ++   
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
             A++   +M     +    TY  +I      G   + +K+   M   G + PN+  Y+ 
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMG-ICPNVIVYSS 119

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNG 278
           L+   C    + EA N+  +M + G+K +V+TYN++  A  + G   +A     +M   G
Sbjct: 120 LINGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEG 179

Query: 279 VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVD 338
           + P+  T   +I    K+GK++EA +    M + G  PN+V +N L+ G       D   
Sbjct: 180 ILPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAV 239

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            +  +M E  +  DVI+Y+T++N + T+G  ++   +F  M    + P    Y+IL K  
Sbjct: 240 RLFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKAL 299

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNL 458
            +      A+EL   M   G  P++  +T ++ G C +G ++ AI+VF  +      P++
Sbjct: 300 YQNGRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSI 359

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
           + +  L+ G  +AR+   A EI   +   G+ P   T+ ++       G   EA+R+  +
Sbjct: 360 RIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQ 419

Query: 519 IK 520
           ++
Sbjct: 420 ME 421



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 111/484 (22%), Positives = 221/484 (45%), Gaps = 12/484 (2%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +++ L+  +   GK  +A  +F+ +   G +  ++ Y  L+ AL   ++      +  ++
Sbjct: 11  TVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRM 70

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
                  +   +  VI++  + G   + +  F +M   G+ P    Y++LI G    GK 
Sbjct: 71  LSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGKL 130

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            E+V L D M  +G +K N+ TYN L+ A C      EA     +M   G+ PDVVT+ T
Sbjct: 131 REAVNLFDEMVSQG-IKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTT 189

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +    ++ G+  +A ++   M   G  PN  T   +++G C   ++  A+R    M E G
Sbjct: 190 LIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERG 249

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMD 370
           +  +++ +N LI G+         +E + L ++ +   + P + TY+ ++ A    G + 
Sbjct: 250 IKIDVISYNTLINGYC---TSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIR 306

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             KE+F++M   G  P    Y++L  G  +    E+A ++  ++    + P++ I++ +I
Sbjct: 307 TAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILI 366

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G       + A+E+FD++   G+ PN+ T+  ++ G  +  +   AE +   M+  G  
Sbjct: 367 GGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCE 426

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTA 550
             + +F  +          ++A   L +++ K       +  D     L  LY  +A ++
Sbjct: 427 QDEISFNFIIRGFLQENQVQKAMEFLKRMREKNF-----SPNDSVTLMLVNLYAADAQSS 481

Query: 551 SYPN 554
             PN
Sbjct: 482 ELPN 485



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 102/330 (30%), Positives = 162/330 (49%), Gaps = 13/330 (3%)

Query: 47  SNSKPTDSQPQTHCSFCMNKESCRT------------VRSMTKLMNSLIERGKPQEAQAI 94
           +N    +S     C F + KE+ RT            V + T L++ L ++GK QEA  I
Sbjct: 147 ANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTTLIDHLSKKGKVQEAYKI 206

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           F  +I+ G  P++VTY +LL  L +  + +    +   + E G+  D I +N +IN +  
Sbjct: 207 FELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERGIKIDVISYNTLINGYCT 266

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
           SG  EEAM  F KM+   LTP+ +TY  L+K     G+   + +L + M   G   P+L 
Sbjct: 267 SGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAKELFNNMQICGQ-SPSLD 325

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           TY VL+   C    I EA +V   + +   KP +  Y+ +     Q    + A E+  E+
Sbjct: 326 TYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGMFQARRWESAMEIFDEI 385

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G+ PN  T  I+I+G CKEGK+ EA R    M+E G   + + FN +I+GF++    
Sbjct: 386 PTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDEISFNFIIRGFLQENQV 445

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               E L  M+E   +P+      ++N ++
Sbjct: 446 QKAMEFLKRMREKNFSPNDSVTLMLVNLYA 475



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 30/125 (24%), Positives = 61/125 (48%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++R  + L+  + +  + + A  IF+ +   G  P++VTY  ++  L  + +      + 
Sbjct: 358 SIRIYSILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLF 417

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            Q+EE+G + D I FN +I  F +   +++AM+   +M+E   +P  S    L+  Y   
Sbjct: 418 VQMEESGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAAD 477

Query: 191 GKPEE 195
            +  E
Sbjct: 478 AQSSE 482


>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Glycine max]
          Length = 589

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/412 (26%), Positives = 198/412 (48%), Gaps = 3/412 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T L+   I +G   EA    N ++  G  P  +TY  ++  L    R  S   ++  +
Sbjct: 167 SCTNLIRGFIRKGLVDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDM 226

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK-ESGLTPTTSTYNTLIKGYGIAGK 192
             +G  PD+I +N++I    + GN  +A++ FW+ +   G  P   TY  LI+       
Sbjct: 227 SLSGCSPDAITYNSIIRCLFDKGNFNQAVN-FWRDQLRKGCPPYLITYTVLIELVCKYCG 285

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
              ++++L+ M+ EG   P++ TYN LV     +    +   V+  + + GM+P+ VTYN
Sbjct: 286 AARALEVLEDMAMEG-CYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYN 344

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+  +   +G  D+ ++++  M      P   T  I+++G CK G +  A+ F  TM   
Sbjct: 345 TLIHSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTE 404

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
              P+++ +N L+ G  +    D   ++L L+     +P ++TY+ +++  +  G M+  
Sbjct: 405 NCSPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESA 464

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           KE++D+M   GI PD   +S L  G+ R  + E+A ELL  M           +  +I G
Sbjct: 465 KELYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILG 524

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            C    +D AI+V D M +   +P+ + +  L+   ++      A ++ Q +
Sbjct: 525 LCRQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLHQTL 576



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/392 (24%), Positives = 168/392 (42%), Gaps = 16/392 (4%)

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           D +  N ++      G +  A      M      P   +   LI+G+   G  +E+ K L
Sbjct: 129 DEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGLVDEACKTL 188

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
           + M   G V P+  TYN+++   C    +  A +++  M+ SG  PD +TYN+I      
Sbjct: 189 NKMVMSGGV-PDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNSIIRCLFD 247

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
            G  +QA     +    G  P   T  ++I   CK      AL     M   G +P++V 
Sbjct: 248 KGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEGCYPDIVT 307

Query: 321 FNLLIKGFVEIMDRDGVDEVLAL----MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +N L    V +  + G  E  AL    +    + P+ +TY+T++++    G+ D+  +I 
Sbjct: 308 YNSL----VNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVDDIL 363

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             M +    P    Y+IL  G  +    ++A     TM+     P+++ + T++SG C +
Sbjct: 364 KIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGLCKE 423

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST- 495
           G +D  I++ + +     SP L T+  ++ G +       A+E+   M   G+ P + T 
Sbjct: 424 GFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDEITH 483

Query: 496 ------FLLLAEARRATGLTKEAKRILSKIKN 521
                 F    +   AT L KE      +IKN
Sbjct: 484 SSLTWGFCRADQLEEATELLKEMSMKEQRIKN 515



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 72/292 (24%), Positives = 135/292 (46%), Gaps = 1/292 (0%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
            A  +  ++   G  P +VTY +L+   + Q ++     ++  +  +GM P+++ +N +I
Sbjct: 288 RALEVLEDMAMEGCYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLI 347

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           ++    G  +E  D    M E+   PT  TYN L+ G   +G  + ++     M  E N 
Sbjct: 348 HSLINHGYWDEVDDILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTE-NC 406

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            P++ TYN L+   C E  I E   +++ +  +   P +VTYN +    A+ G  + A+E
Sbjct: 407 SPDIITYNTLLSGLCKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKE 466

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  EM   G+ P+  T   +  G+C+  +++EA    + M           +  +I G  
Sbjct: 467 LYDEMVDKGIIPDEITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLC 526

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK 381
                D   +VL LM + + NPD   YS ++ A +  G + +  ++   + K
Sbjct: 527 RQKKVDIAIQVLDLMVKGQCNPDERIYSALIKAVADGGMLKEANDLHQTLIK 578


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 218/483 (45%), Gaps = 39/483 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T LM+ L + G    A+ +F  L+E    P+ VTY+ L+         N    ++ ++EE
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY------GI 189
             + P+ I ++++++ +++ G + EAMD   KM +  + P    Y TLI GY      GI
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315

Query: 190 A-----------------------------GKPEESVKLL-DLMSREGNVKPNLRTYNVL 219
           A                             G+ EE+ +L  D+MSR   + P+   Y  +
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR--GLLPDRVNYTSM 373

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +  +      ++A+N+  +M       DVV YN +     + G+  ++E     M   G+
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGL 432

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            P+  T   +I+ YCKEG +  AL+    MK YG+ PN +  N+L++      + +   +
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +L  M     +P   T+  +++A S +   D    + D +   G+K D   Y+ L   + 
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFC 552

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           R     +A  +   M+  G   +++ +  +I G+C    + +A  V  +M   GVSPN++
Sbjct: 553 RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVE 612

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+  L+ G S AR    A  ++  MK  G+ P  +T+ +L       G  KE  ++  ++
Sbjct: 613 TYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEM 672

Query: 520 KNK 522
             K
Sbjct: 673 ITK 675



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 229/521 (43%), Gaps = 72/521 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +MN L + GK +EA+++F  + E G  P+  +Y TL+ +L  +        +  
Sbjct: 122 VVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQG 181

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+  D + + A+++   ++G    A D F  + E  L P   TY+ LI G+   G
Sbjct: 182 RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLG 241

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              +   LL  M  E ++ PN+  Y+ +V  +  +  + EA +VM KM    + P+V  Y
Sbjct: 242 DVNKGELLLQEM-EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVY 300

Query: 252 NTIATAY-----------------------------------AQNGEADQAEEVIVEMEH 276
            T+   Y                                    ++G  ++A+E+  +M  
Sbjct: 301 GTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMS 360

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G+ P+      ++ G+ K GK  +A   A+ M E     ++V +N+LI G  ++   + 
Sbjct: 361 RGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES 420

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            +     M++  + PD  T++T++NA+   G +    ++ ++M   G+KP++   +IL +
Sbjct: 421 -ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQ 479

Query: 397 GYVREQEPEKAEELLMTMIESGFHP------------------NVVI------------- 425
                 E EK  +LL  M+  GFHP                  +V++             
Sbjct: 480 RLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKL 539

Query: 426 ----FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
               + T+IS +C  G + RA  VF  M   G+  ++ T+  L+ GY  +    +A  + 
Sbjct: 540 DLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVH 599

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             M   GV P   T+ +L     A  L KEA  +++++K +
Sbjct: 600 SQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKER 640



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 176/378 (46%), Gaps = 36/378 (9%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           FN +I+ +  +G +  A++    MK  G  P   TYNTL+ G+   G    + KL+  +S
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
              N++PN+ TY  L+ A+C  + + +A  +  +M    + PDVVTY  I     ++G+ 
Sbjct: 80  LV-NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKV 138

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           ++A+ V  EME  GV PN  +   +I    KEG + EA      M   G+          
Sbjct: 139 EEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI---------- 188

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
             GF                       DV+ Y+ +M+    AG  +  +++F  + +  +
Sbjct: 189 --GF-----------------------DVVVYTALMDGLFKAGMANNAEDMFQVLLEESL 223

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+   YS L  G+ +  +  K E LL  M E    PNV+++++I+ G+   G ++ A++
Sbjct: 224 VPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMD 283

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           V  KM +  + PN+  + TL+ GY +A Q   A ++ + MK+ G+              +
Sbjct: 284 VMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLK 343

Query: 505 ATGLTKEAKRILSKIKNK 522
            +G  +EA  +   + ++
Sbjct: 344 RSGRMEEADELFKDMMSR 361



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/452 (22%), Positives = 208/452 (46%), Gaps = 2/452 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R+V     L++     G+   A  +   +   G  P +VTY TL+          +   +
Sbjct: 15  RSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKL 74

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           M ++    ++P+ I +  +I+A+ +S  +E+A+  + +M    L P   TY  ++ G   
Sbjct: 75  MGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK 134

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +GK EE+  +   M   G V PN  +Y  L+ +   E N+ EA+ +  +M   G+  DVV
Sbjct: 135 SGKVEEAKSVFREMEEVG-VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y  +     + G A+ AE++   +    + PN  T   +I G+CK G + +     + M
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +E  + PN+++++ ++ G+ +    +   +V+  M +  + P+V  Y T+++ +  A   
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
               ++F +M   G++ +            R    E+A+EL   M+  G  P+ V +T++
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+   G    A  +  +M E     ++  +  L+ G  +  + + +E     M+  G+
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGL 432

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            P  +TF  +  A    G    A ++L+++K+
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKS 464



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/460 (22%), Positives = 206/460 (44%), Gaps = 39/460 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +++   ++G   EA  +   +++    P++  Y TL+       +      +  +++ 
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++ ++   ++ +N    SG MEEA + F  M   GL P    Y +++ G+  AGK  +
Sbjct: 326 RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESD 385

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCN-EKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           +  +   M+ E +   ++  YNVL+       K  +E+++    M   G+ PD  T+NT+
Sbjct: 386 AFNIAQEMT-EKSSGFDVVAYNVLINGLFKLGKYESESFHT--GMRQLGLAPDSATFNTM 442

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             AY + G    A +++ EM+  G++PN  TC I++   C  G+I++ +     M   G 
Sbjct: 443 INAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGF 502

Query: 315 HP-----------------------------------NLVIFNLLIKGFVEIMDRDGVDE 339
           HP                                   +L  +N LI  F  +        
Sbjct: 503 HPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATL 562

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           V   M    +  D+ITY+ +++ +  +  + K   +   M   G+ P+   Y+IL  G  
Sbjct: 563 VFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLS 622

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
             +  ++A  L+  M E G  PN   +  ++SG    G+M   ++++ +M   G  P  +
Sbjct: 623 AARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTR 682

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           T+  L+  +++ ++  +A+E++Q M+  G+ P  ST+ +L
Sbjct: 683 TYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDIL 722



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 205/442 (46%), Gaps = 14/442 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+++  +    ++A  +++ +      P +VTYT ++  L    +     S+  
Sbjct: 87  VITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFR 146

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++EE G+ P+   +  +I++  + GN+ EA     +M   G+      Y  L+ G   AG
Sbjct: 147 EMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAG 206

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               +  +  ++  E  V PN  TY+ L+   C   ++ +   ++ +M    + P+V+ Y
Sbjct: 207 MANNAEDMFQVLLEESLV-PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVY 265

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           ++I   Y + G  ++A +V+ +M    + PN    G +I GY K  +   AL   + MK 
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDG----VDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            G+  N    N +I  FV  + R G     DE+   M    + PD + Y+++M+ +  AG
Sbjct: 326 RGLEEN----NFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
                  I  +M +     D  AY++L  G  +  + E +E     M + G  P+   F 
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFN 440

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T+I+ +C +G++  A+++ ++M  +G+ PN  T   L+     A +  +  ++L  M   
Sbjct: 441 TMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVM 500

Query: 488 GVHPQKSTFLLLAEA----RRA 505
           G HP  +T   + +A    RRA
Sbjct: 501 GFHPTPTTHKAVLDASSKSRRA 522



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 117/236 (49%)

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           ++I GYC+ G+I  A+     MK  G  P++V +N L+ GF +I D     +++  +   
Sbjct: 22  VLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLV 81

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            + P+VITY+T+++A+  +  ++    ++D+M    + PD   Y+ +  G  +  + E+A
Sbjct: 82  NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA 141

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           + +   M E G  PN   + T+I     +G++  A  +  +M   G+  ++  +  LM G
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDG 201

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
             +A     AE++ Q++    + P   T+  L +     G   + + +L +++ K 
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 13/239 (5%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++    G  + A  +F +++  G    ++TY  L+    I        ++ SQ+   G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +N ++   S +  ++EA     +MKE GL P  +TY+ L+ G+G  G  +E V
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL   M  +G V P  RTYNVL+  +   K +++A  +M +M   G+ P+  TY+ +   
Sbjct: 667 KLYCEMITKGFV-PKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICG 725

Query: 258 Y------------AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           +             +     +A+ +  EM   G  P   T   I     K GK  +A R
Sbjct: 726 WYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQR 784


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 199/396 (50%), Gaps = 11/396 (2%)

Query: 137 GMDPDSIFFNAVINAFSES---GNMEEAMDTFWKMKES-------GLTPTTSTYNTLIKG 186
           G + D + +NAV+     +   G++EE MD   K+ E+       G TP    Y T+I G
Sbjct: 216 GCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDG 275

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
               G  E + ++L  M   G +KPN+  YN +++  C+     +A  ++ +M       
Sbjct: 276 ICKEGHHEVANEILSRMPSYG-LKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPL 334

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           D VT+N +   + QNG  D+  E++ +M  +G  P+  T   +I+G+CKEG I EA+   
Sbjct: 335 DDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLL 394

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
           + M   G  PN + + +++KG          +E+++ M +    P+ +T++TI+N     
Sbjct: 395 KNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKK 454

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G +++  E+   M   G  PD  +YS +  G  +  + E+A ELL  MI  G  PNV+ +
Sbjct: 455 GLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITY 514

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           +++      +G +D+ I++FD + +  +  +   +  ++    + R+   A + L  M +
Sbjct: 515 SSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVS 574

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            G  P +ST+  L +   + GL  EA+ +LS++ ++
Sbjct: 575 NGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSR 610



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 119/492 (24%), Positives = 225/492 (45%), Gaps = 52/492 (10%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           ++ L+ SL   G+  +A      L   G+   +V Y  ++A      +  +   + + V 
Sbjct: 55  LSALIRSLCVAGRTADA---VRALDAAGNAAGVVDYNAMVAGYCRVGQVEAARRLAAAVP 111

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
              + P++  +  V+      G + +A+    +M      P    Y+ +I+    +G   
Sbjct: 112 ---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSRSCVPIPPMYHVIIESACRSGGYS 168

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            ++++L+ +  +G+   +    N+++ A C++  + E   ++ K+   G + D+V+YN +
Sbjct: 169 SALRVLEALHAKGSTL-DTGNCNLVINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAV 227

Query: 255 A---TAYAQNGEADQ-------AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
                A  + G+ ++         E + +M  +G  P+ R    II G CKEG  + A  
Sbjct: 228 LKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANE 287

Query: 305 FARTMKEYGVHPNLVIFNLLIKG-------------------------------FVEIMD 333
               M  YG+ PN+V +N ++KG                                V+   
Sbjct: 288 ILSRMPSYGLKPNVVCYNTVLKGICSADRWEKAEELLTEMYQKNCPLDDVTFNILVDFFC 347

Query: 334 RDG-VDEVLAL---MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           ++G VD V+ L   M E    PDVITY+T++N +   G +D+   +  +M   G KP+  
Sbjct: 348 QNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTI 407

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           +Y+I+ KG    +    AEEL+  MI+ G  PN V F TII+  C  G +++AIE+  +M
Sbjct: 408 SYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQM 467

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
             +G +P+L ++ T++ G  +A +   A E+L +M   G+ P   T+  +A A    G  
Sbjct: 468 LVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRI 527

Query: 510 KEAKRILSKIKN 521
            +  ++   I++
Sbjct: 528 DKVIQMFDNIQD 539



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 196/420 (46%), Gaps = 46/420 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI----------H 127
           ++N++ ++G   E   +   L   G +  +V+Y  +L  L   KR+  +          H
Sbjct: 192 VINAICDQGCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVH 251

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY 187
             +SQ+ ++G  PD   +  +I+   + G+ E A +   +M   GL P    YNT++KG 
Sbjct: 252 EALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGI 311

Query: 188 GIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
             A + E++ +LL  M ++ N   +  T+N+LV  +C    +     ++ +M   G  PD
Sbjct: 312 CSADRWEKAEELLTEMYQK-NCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPD 370

Query: 248 VVTYNTIATAYAQNGEADQA-----------------------------------EEVIV 272
           V+TY T+   + + G  D+A                                   EE++ 
Sbjct: 371 VITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMS 430

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
            M   G  PN  T   II+  CK+G +++A+   + M   G +P+L+ ++ +I G  +  
Sbjct: 431 RMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAG 490

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
             +   E+L +M    + P+VITYS++  A +  G +DK  ++FD++  A I+ DA  Y+
Sbjct: 491 KTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYN 550

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            +     + +E + A + L  M+ +G  PN   +T +I G  S+G +  A ++  ++C  
Sbjct: 551 AVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSR 610



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 69/231 (29%), Positives = 122/231 (52%), Gaps = 1/231 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T ++N   + G   EA  +  N+   G KP+ ++YT +L  L   +R+     +MS
Sbjct: 371 VITYTTVINGFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMS 430

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G  P+ + FN +IN   + G +E+A++   +M  +G  P   +Y+T+I G G AG
Sbjct: 431 RMIQQGCLPNPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAG 490

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K EE+++LL++M  +G + PN+ TY+ +  A   E  I +   +   +  + ++ D V Y
Sbjct: 491 KTEEALELLNVMINKG-ITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLY 549

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           N + ++  +  E D A + +  M  NG  PN  T   +I G   EG + EA
Sbjct: 550 NAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEA 600



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 1/147 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + +++ L + GK +EA  + N +I  G  P+++TY+++  AL  + R + +  +   +
Sbjct: 478 SYSTVIDGLGKAGKTEEALELLNVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNI 537

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           ++  +  D++ +NAVI++  +    + A+D    M  +G  P  STY  LIKG    G  
Sbjct: 538 QDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLL 597

Query: 194 EESVKLL-DLMSREGNVKPNLRTYNVL 219
            E+  LL +L SR    K   R + ++
Sbjct: 598 CEAQDLLSELCSRRAVRKHLTRRFGIV 624



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 62/304 (20%), Positives = 118/304 (38%), Gaps = 31/304 (10%)

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
           P  S+     +S +  V       + L+R+ C      +A   +  + A+G    VV YN
Sbjct: 32  PATSISTAATVSADTAVGGGSGRLSALIRSLCVAGRTADA---VRALDAAGNAAGVVDYN 88

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +   Y + G+ + A  +   +    V PN  T   ++ G C  G+I +AL     M   
Sbjct: 89  AMVAGYCRVGQVEAARRLAAAVP---VPPNAYTYFPVVRGLCGRGRIADALAVLDEMTSR 145

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
              P   +++++I+             VL  +       D    + ++NA    G +D+ 
Sbjct: 146 SCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQGCVDEG 205

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            E+   +   G + D  +Y+ + KG    +     EEL+  M++   H            
Sbjct: 206 LEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVK--VH------------ 251

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
                      E   +M +HG +P+++ + T++ G  +      A EIL  M ++G+ P 
Sbjct: 252 -----------EALSQMAQHGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPN 300

Query: 493 KSTF 496
              +
Sbjct: 301 VVCY 304


>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
 gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
          Length = 484

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 203/446 (45%), Gaps = 8/446 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V   T+L++ L+   + +EA   F   +    +PSL ++T ++      +        + 
Sbjct: 44  VYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLG 103

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ PD   +N V+  + + G +  A+  F KM ++   P  +TYNT+I G    G
Sbjct: 104 YMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNVATYNTVINGLCKFG 162

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K + +V L   +  +  V P+  TY+ LV   C  + +  A  V   M  +    D   Y
Sbjct: 163 KIDWAVHLFTRLPHD-LVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAY 221

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK-EGKIKEALRFARTMK 310
           N +A  + +    D+A EV+  M   G +P+  T   II+G C+ + +I+EA R  + M 
Sbjct: 222 NAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMV 281

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                PN V +  +I G  +I +     E+   M +  ++PD   Y +++ A+     +D
Sbjct: 282 GSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLD 341

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM--TMIESGFHPNVVIFTT 428
           + K I  D  +  + PD + Y+ L  GY R ++P   E LL+   M +    PNV+ +  
Sbjct: 342 EAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNI 401

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++ G C  G  D A ++F +M +   SPN  TF+ +  G     +  + E I   M   G
Sbjct: 402 VLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDMVYKG 461

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKR 514
               +   L   E     G+T EA+R
Sbjct: 462 RWQGEGPIL---EQHGLIGVTDEARR 484



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 193/428 (45%), Gaps = 9/428 (2%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G++  +  YT LL  L   +R         +       P    F  +I  F    N   A
Sbjct: 39  GYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRA 98

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
                 M+  G+ P  + YN ++KGY   G+   ++     M +    KPN+ TYN ++ 
Sbjct: 99  WRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGK--TCKPNVATYNTVIN 156

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C    I  A ++  ++    + PD  TY+T+     Q    + A +V   M       
Sbjct: 157 GLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDG 216

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +      +  G+CKE ++ EAL   +TM + G  P++V +N +I G  +  +R  ++E  
Sbjct: 217 DAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNR--IEEAY 274

Query: 342 ALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            L ++       P+ +TY T++   S    + +C E+F  M KAG+ PD +AY  L   +
Sbjct: 275 RLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAF 334

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC--SDGSMDRAIEVFDKMCEHGVSP 456
           V+ ++ ++A+ +L     +   P+V ++TT+ISG+C      +D A+ +F  M +  V P
Sbjct: 335 VKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWP 394

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N+ T+  ++ G  +  +   A +I Q M      P + TF ++       G T + +RI 
Sbjct: 395 NVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIF 454

Query: 517 SKIKNKER 524
             +  K R
Sbjct: 455 MDMVYKGR 462



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/355 (25%), Positives = 158/355 (44%), Gaps = 44/355 (12%)

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE--GNVKPNLRTYNVLVRAW 223
           W  K+ G       Y  L+     A +  E+V+      RE   + +P+L ++ ++++ +
Sbjct: 33  WSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFF---KRELCAHCRPSLYSFTIIIQCF 89

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           CN +N   AW  +  M + G+ PDV  YN                               
Sbjct: 90  CNVRNPGRAWRYLGYMRSLGIPPDVTAYN------------------------------- 118

Query: 284 RTCGIIISGYCKEGKIKEAL-RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
               +++ GYC  G++  AL +F +  K     PN+  +N +I G  +    D    +  
Sbjct: 119 ----VVLKGYCDLGRVGRALIKFGKMGKT--CKPNVATYNTVINGLCKFGKIDWAVHLFT 172

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            +    V+PD  TYST+++    A  ++   +++D M +A    DA AY+ +A G+ +E+
Sbjct: 173 RLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKER 232

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCS-DGSMDRAIEVFDKMCEHGVSPNLKTF 461
             ++A E+L TMI+ G  P+VV +  II+G C     ++ A  +F +M      PN  T+
Sbjct: 233 RVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTY 292

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
            T++ G S+  +  R  E+ + M   G+ P    +  L  A        EAK IL
Sbjct: 293 GTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSIL 347



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/323 (24%), Positives = 149/323 (46%), Gaps = 4/323 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M K     V +   ++N L + GK   A  +F  L      P   TY+TL+  L   +R 
Sbjct: 140 MGKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERL 199

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            +   +   + E   D D+  +NA+ + F +   ++EA++    M + G  P+  TYN +
Sbjct: 200 EAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCI 259

Query: 184 IKGYG-IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           I G      + EE+ +L   M    +  PN  TY  ++        +     +   M+ +
Sbjct: 260 INGVCQYKNRIEEAYRLFQQMV-GSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKA 318

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK--IK 300
           G+ PD   Y+++  A+ +  + D+A+ ++ +   N V P+      +ISGYC+  K  + 
Sbjct: 319 GLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVD 378

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           EAL   + MK+  V PN++ +N++++G  +    D   ++   M + + +P+ +T+  + 
Sbjct: 379 EALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMT 438

Query: 361 NAWSTAGFMDKCKEIFDDMGKAG 383
                 G  DK + IF DM   G
Sbjct: 439 MGMIHCGKTDKFERIFMDMVYKG 461


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 218/483 (45%), Gaps = 39/483 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T LM+ L + G    A+ +F  L+E    P+ VTY+ L+         N    ++ ++EE
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY------GI 189
             + P+ I ++++++ +++ G + EAMD   KM +  + P    Y TLI GY      GI
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315

Query: 190 A-----------------------------GKPEESVKLL-DLMSREGNVKPNLRTYNVL 219
           A                             G+ EE+ +L  D+MSR   + P+   Y  +
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR--GLLPDRVNYTSM 373

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +  +      ++A+N+  +M       DVV YN +     + G+  ++E     M   G+
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGL 432

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            P+  T   +I+ YCKEG +  AL+    MK YG+ PN +  N+L++      + +   +
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +L  M     +P   T+  +++A S +   D    + D +   G+K D   Y+ L   + 
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFC 552

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           R     +A  +   M+  G   +++ +  +I G+C    + +A  V  +M   GVSPN++
Sbjct: 553 RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVE 612

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+  L+ G S AR    A  ++  MK  G+ P  +T+ +L       G  KE  ++  ++
Sbjct: 613 TYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEM 672

Query: 520 KNK 522
             K
Sbjct: 673 ITK 675



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 229/521 (43%), Gaps = 72/521 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +MN L + GK +EA+++F  + E G  P+  +Y TL+ +L  +        +  
Sbjct: 122 VVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQG 181

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+  D + + A+++   ++G    A D F  + E  L P   TY+ LI G+   G
Sbjct: 182 RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLG 241

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              +   LL  M  E ++ PN+  Y+ +V  +  +  + EA +VM KM    + P+V  Y
Sbjct: 242 DVNKGELLLQEM-EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVY 300

Query: 252 NTIATAY-----------------------------------AQNGEADQAEEVIVEMEH 276
            T+   Y                                    ++G  ++A+E+  +M  
Sbjct: 301 GTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMS 360

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G+ P+      ++ G+ K GK  +A   A+ M E     ++V +N+LI G  ++   + 
Sbjct: 361 RGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES 420

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            +     M++  + PD  T++T++NA+   G +    ++ ++M   G+KP++   +IL +
Sbjct: 421 -ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQ 479

Query: 397 GYVREQEPEKAEELLMTMIESGFHP------------------NVVI------------- 425
                 E EK  +LL  M+  GFHP                  +V++             
Sbjct: 480 RLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKL 539

Query: 426 ----FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
               + T+IS +C  G + RA  VF  M   G+  ++ T+  L+ GY  +    +A  + 
Sbjct: 540 DLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVH 599

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             M   GV P   T+ +L     A  L KEA  +++++K +
Sbjct: 600 SQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKER 640



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 176/378 (46%), Gaps = 36/378 (9%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           FN +I+ +  +G +  A++    MK  G  P   TYNTL+ G+   G    + KL+  +S
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
              N++PN+ TY  L+ A+C  + + +A  +  +M    + PDVVTY  I     ++G+ 
Sbjct: 80  LV-NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKV 138

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           ++A+ V  EME  GV PN  +   +I    KEG + EA      M   G+          
Sbjct: 139 EEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI---------- 188

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
             GF                       DV+ Y+ +M+    AG  +  +++F  + +  +
Sbjct: 189 --GF-----------------------DVVVYTALMDGLFKAGMANNAEDMFQVLLEESL 223

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+   YS L  G+ +  +  K E LL  M E    PNV+++++I+ G+   G ++ A++
Sbjct: 224 VPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMD 283

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           V  KM +  + PN+  + TL+ GY +A Q   A ++ + MK+ G+              +
Sbjct: 284 VMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLK 343

Query: 505 ATGLTKEAKRILSKIKNK 522
            +G  +EA  +   + ++
Sbjct: 344 RSGRMEEADELFKDMMSR 361



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 102/452 (22%), Positives = 208/452 (46%), Gaps = 2/452 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R+V     L++     G+   A  +   +   G  P +VTY TL+          +   +
Sbjct: 15  RSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKL 74

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           M ++    ++P+ I +  +I+A+ +S  +E+A+  + +M    L P   TY  ++ G   
Sbjct: 75  MGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK 134

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +GK EE+  +   M   G V PN  +Y  L+ +   E N+ EA+ +  +M   G+  DVV
Sbjct: 135 SGKVEEAKSVFREMEEVG-VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y  +     + G A+ AE++   +    + PN  T   +I G+CK G + +     + M
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +E  + PN+++++ ++ G+ +    +   +V+  M +  + P+V  Y T+++ +  A   
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
               ++F +M   G++ +            R    E+A+EL   M+  G  P+ V +T++
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+   G    A  +  +M E     ++  +  L+ G  +  + + +E     M+  G+
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGL 432

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            P  +TF  +  A    G    A ++L+++K+
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKS 464



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 103/460 (22%), Positives = 206/460 (44%), Gaps = 39/460 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +++   ++G   EA  +   +++    P++  Y TL+       +      +  +++ 
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G++ ++   ++ +N    SG MEEA + F  M   GL P    Y +++ G+  AGK  +
Sbjct: 326 RGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESD 385

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCN-EKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           +  +   M+ E +   ++  YNVL+       K  +E+++    M   G+ PD  T+NT+
Sbjct: 386 AFNIAQEMT-EKSSGFDVVAYNVLINGLFKLGKYESESFHT--GMRQLGLAPDSATFNTM 442

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
             AY + G    A +++ EM+  G++PN  TC I++   C  G+I++ +     M   G 
Sbjct: 443 INAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGF 502

Query: 315 HP-----------------------------------NLVIFNLLIKGFVEIMDRDGVDE 339
           HP                                   +L  +N LI  F  +        
Sbjct: 503 HPTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATL 562

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           V   M    +  D+ITY+ +++ +  +  + K   +   M   G+ P+   Y+IL  G  
Sbjct: 563 VFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLS 622

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
             +  ++A  L+  M E G  PN   +  ++SG    G+M   ++++ +M   G  P  +
Sbjct: 623 AARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTR 682

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           T+  L+  +++ ++  +A+E++Q M+  G+ P  ST+ +L
Sbjct: 683 TYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDIL 722



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 205/442 (46%), Gaps = 14/442 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+++  +    ++A  +++ +      P +VTYT ++  L    +     S+  
Sbjct: 87  VITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFR 146

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++EE G+ P+   +  +I++  + GN+ EA     +M   G+      Y  L+ G   AG
Sbjct: 147 EMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAG 206

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               +  +  ++  E  V PN  TY+ L+   C   ++ +   ++ +M    + P+V+ Y
Sbjct: 207 MANNAEDMFQVLLEESLV-PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVY 265

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           ++I   Y + G  ++A +V+ +M    + PN    G +I GY K  +   AL   + MK 
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDG----VDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            G+  N    N +I  FV  + R G     DE+   M    + PD + Y+++M+ +  AG
Sbjct: 326 RGLEEN----NFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
                  I  +M +     D  AY++L  G  +  + E +E     M + G  P+   F 
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFN 440

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T+I+ +C +G++  A+++ ++M  +G+ PN  T   L+     A +  +  ++L  M   
Sbjct: 441 TMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVM 500

Query: 488 GVHPQKSTFLLLAEA----RRA 505
           G HP  +T   + +A    RRA
Sbjct: 501 GFHPTPTTHKAVLDASSKSRRA 522



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 117/236 (49%)

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           ++I GYC+ G+I  A+     MK  G  P++V +N L+ GF +I D     +++  +   
Sbjct: 22  VLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLV 81

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            + P+VITY+T+++A+  +  ++    ++D+M    + PD   Y+ +  G  +  + E+A
Sbjct: 82  NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA 141

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           + +   M E G  PN   + T+I     +G++  A  +  +M   G+  ++  +  LM G
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDG 201

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
             +A     AE++ Q++    + P   T+  L +     G   + + +L +++ K 
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 63/240 (26%), Positives = 109/240 (45%), Gaps = 13/240 (5%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++    G  + A  +F +++  G    ++TY  L+    I        ++ SQ+   G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +N ++   S +  ++EA     +MKE GL P  +TY+ L+ G+G  G  +E V
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL   M  +G V P  RTYNVL+  +   K +++A  +M +M   G+ P+  TY+ +   
Sbjct: 667 KLYCEMITKGFV-PKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICG 725

Query: 258 Y------------AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           +             +     +A+ +  EM   G  P   T   I     K GK  +A R 
Sbjct: 726 WYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRI 785


>gi|83744090|gb|ABC42331.1| PPR protein [Oryza sativa Indica Group]
          Length = 506

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 199/452 (44%), Gaps = 40/452 (8%)

Query: 83  IERGKPQEAQAIFNNLIEGGHK---PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMD 139
           + R  P  A + FN +   G     P++ TY  L+       R +   + +  V + G  
Sbjct: 63  VARDNPAAAVSRFNRMARAGASMVTPTVHTYGILIGCCCSAGRLDLGFAALGHVVKKGFR 122

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWK-MKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            + I FN ++         ++AMD   + M E G  P   ++  ++KG     + +E+++
Sbjct: 123 VEPIIFNPLLKGLCADKRTDDAMDIVLRGMTELGCVPNVFSHTIILKGLCHENRSQEALE 182

Query: 199 LLDLMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           LL +M+ +G    PN+ +Y+ +        +  +A+    +M    + P+VVTY++I  A
Sbjct: 183 LLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYATYREMLDRRILPNVVTYSSIIAA 242

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    D+A EV   M  NGV PN  T   ++ G+C  G++ EA++F   M   GV PN
Sbjct: 243 LCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCSSGQLTEAIKFLEKMCSNGVEPN 302

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
                                              V+TYS+ M+     G   + ++IF 
Sbjct: 303 -----------------------------------VVTYSSFMDYLCKNGRCTEARKIFY 327

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M K G+KPD   YS L  GY  E    +   L   M++S   P+  +F T+I      G
Sbjct: 328 SMVKRGLKPDITTYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQG 387

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D A+ VF KM   G+ PN  T+ TL+ GY +  +   A  + Q M + GV P   T+ 
Sbjct: 388 KVDEAMLVFSKMRHQGLKPNCVTYNTLINGYCKITRMENALALFQEMVSNGVSPNFITYN 447

Query: 498 LLAEARRATGLTKEAKRILSKIKNKERTNEME 529
           ++ +    TG T  AK    +I    + + +E
Sbjct: 448 IMLQGLFRTGRTGTAKEFYVQIIKSGKKDLIE 479



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 164/319 (51%), Gaps = 9/319 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIE--GGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           V S T ++  L    + QEA  + + + +  GG  P++V+Y+T+   L      +  ++ 
Sbjct: 161 VFSHTIILKGLCHENRSQEALELLHMMADDGGGCLPNVVSYSTVTDGLLKGGDPDKAYAT 220

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
             ++ +  + P+ + ++++I A  +   M++AM+   +M ++G+TP   TY +L+ G+  
Sbjct: 221 YREMLDRRILPNVVTYSSIIAALCKGQAMDKAMEVHDRMVKNGVTPNCFTYTSLVHGFCS 280

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +G+  E++K L+ M   G V+PN+ TY+  +   C     TEA  + + M   G+KPD+ 
Sbjct: 281 SGQLTEAIKFLEKMCSNG-VEPNVVTYSSFMDYLCKNGRCTEARKIFYSMVKRGLKPDIT 339

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY+++   YA  G   +   +   M  + +QP+      +I    K+GK+ EA+     M
Sbjct: 340 TYSSLLHGYAIEGALVEMHGLFDLMVQSDMQPDHYVFNTLIYASAKQGKVDEAMLVFSKM 399

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTA 366
           +  G+ PN V +N LI G+ +I     ++  LAL +E     V+P+ ITY+ ++      
Sbjct: 400 RHQGLKPNCVTYNTLINGYCKITR---MENALALFQEMVSNGVSPNFITYNIMLQGLFRT 456

Query: 367 GFMDKCKEIFDDMGKAGIK 385
           G     KE +  + K+G K
Sbjct: 457 GRTGTAKEFYVQIIKSGKK 475


>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
 gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
          Length = 484

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 203/446 (45%), Gaps = 8/446 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V   T+L++ L+   + +EA   F   +    +PSL ++T ++      +        + 
Sbjct: 44  VYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLG 103

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ PD   +N V+  + + G +  A+  F KM ++   P  +TYNT+I G    G
Sbjct: 104 YMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGKT-CKPNVATYNTVINGLCKFG 162

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K + +V L   +  +  V P+  TY+ LV   C  + +  A  V   M  +    D   Y
Sbjct: 163 KIDWAVHLFTRLPHD-LVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAY 221

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK-EGKIKEALRFARTMK 310
           N +A  + +    D+A EV+  M     +P+  T   II+G C+ + +I+EA R  + M 
Sbjct: 222 NAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMV 281

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
                PN V +  +I G  +I +     E+   M +  ++PD   Y +++ A+     +D
Sbjct: 282 GSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLD 341

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLM--TMIESGFHPNVVIFTT 428
           + K I  D  +  + PD + Y+ L  GY R ++P   E LL+   M +    PNV+ +  
Sbjct: 342 EAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNI 401

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++ G C  G  D A ++F +M +   SPN  TF+ +  G    R+  + E I   M   G
Sbjct: 402 VLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCRKTDKFERIFMDMVYKG 461

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKR 514
               +   L   E     G+T EA+R
Sbjct: 462 RWQGEGPIL---EQHGLIGVTDEARR 484



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 107/428 (25%), Positives = 191/428 (44%), Gaps = 9/428 (2%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G++  +  YT LL  L   +R         +       P    F  +I  F    N   A
Sbjct: 39  GYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRA 98

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
                 M+  G+ P  + YN ++KGY   G+   ++     M +    KPN+ TYN ++ 
Sbjct: 99  WRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMGK--TCKPNVATYNTVIN 156

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
             C    I  A ++  ++    + PD  TY+T+     Q    + A +V   M       
Sbjct: 157 GLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDG 216

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +      +  G+CKE ++ EAL   +TM +    P++V +N +I G  +  +R  ++E  
Sbjct: 217 DAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNR--IEEAY 274

Query: 342 ALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            L ++       P+ +TY T++   S    + +C E+F  M KAG+ PD +AY  L   +
Sbjct: 275 RLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAF 334

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC--SDGSMDRAIEVFDKMCEHGVSP 456
           V+ ++ ++A+ +L     +   P+V ++TT+ISG+C      +D A+ +F  M +  V P
Sbjct: 335 VKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWP 394

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N+ T+  ++ G  +  +   A +I Q M      P + TF ++         T + +RI 
Sbjct: 395 NVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGMIHCRKTDKFERIF 454

Query: 517 SKIKNKER 524
             +  K R
Sbjct: 455 MDMVYKGR 462



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 157/355 (44%), Gaps = 44/355 (12%)

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE--GNVKPNLRTYNVLVRAW 223
           W  K+ G       Y  L+     A +  E+V+      RE   + +P+L ++ ++++ +
Sbjct: 33  WSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFF---KRELCAHCRPSLYSFTIIIQCF 89

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           CN +N   AW  +  M + G+ PDV  YN                               
Sbjct: 90  CNVRNPGRAWRYLGYMRSLGIPPDVTAYN------------------------------- 118

Query: 284 RTCGIIISGYCKEGKIKEAL-RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
               +++ GYC  G++  AL +F +  K     PN+  +N +I G  +    D    +  
Sbjct: 119 ----VVLKGYCDLGRVGRALIKFGKMGKT--CKPNVATYNTVINGLCKFGKIDWAVHLFT 172

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            +    V+PD  TYST+++    A  ++   +++D M +A    DA AY+ +A G+ +E+
Sbjct: 173 RLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKER 232

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCS-DGSMDRAIEVFDKMCEHGVSPNLKTF 461
             ++A E+L TMI+    P+VV +  II+G C     ++ A  +F +M      PN  T+
Sbjct: 233 RVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTY 292

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
            T++ G S+  +  R  E+ + M   G+ P    +  L  A        EAK IL
Sbjct: 293 GTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSIL 347



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 147/323 (45%), Gaps = 4/323 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M K     V +   ++N L + GK   A  +F  L      P   TY+TL+  L   +R 
Sbjct: 140 MGKTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERL 199

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
            +   +   + E   D D+  +NA+ + F +   ++EA++    M +    P+  TYN +
Sbjct: 200 EAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCI 259

Query: 184 IKGYG-IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           I G      + EE+ +L   M    +  PN  TY  ++        +     +   M+ +
Sbjct: 260 INGVCQYKNRIEEAYRLFQQMV-GSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKA 318

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK--IK 300
           G+ PD   Y+++  A+ +  + D+A+ ++ +   N V P+      +ISGYC+  K  + 
Sbjct: 319 GLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVD 378

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
           EAL   + MK+  V PN++ +N++++G  +    D   ++   M + + +P+ +T+  + 
Sbjct: 379 EALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMT 438

Query: 361 NAWSTAGFMDKCKEIFDDMGKAG 383
                    DK + IF DM   G
Sbjct: 439 MGMIHCRKTDKFERIFMDMVYKG 461


>gi|357140697|ref|XP_003571900.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Brachypodium distachyon]
          Length = 571

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 183/406 (45%), Gaps = 39/406 (9%)

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
           H+PS  +   LL+AL   +R +             + PD   FN VI+   ++G + +A 
Sbjct: 146 HRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAG 205

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGY---GIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           D    ++  GL P+  TYNT+I GY   G AG+      LL  M  E  + PN  T+NVL
Sbjct: 206 DVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMV-EAGISPNEVTFNVL 264

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           V  +C + N   A  V  +M   G+   VVTY+ +       G+ ++  +++ EM+  G+
Sbjct: 265 VNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGL 324

Query: 280 QPNGRTCGIIISGYCKEG-----------------------------------KIKEALR 304
            PN  T   +++G+CK+G                                   K+K+AL 
Sbjct: 325 VPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALA 384

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               M   GV PN  I+N LI GF    D   V  +L  M+   V  D++TY+ ++ A  
Sbjct: 385 VKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALC 444

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
             G + K  ++ D+M   G++P    Y+ +  GY  +   + A E+   M +     NVV
Sbjct: 445 VKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVV 504

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
            +   I   C  G M+   E+ ++M E G+ PN  T++T+  G  E
Sbjct: 505 TYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTYDTIKEGMME 550



 Score =  142 bits (358), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 97/365 (26%), Positives = 179/365 (49%), Gaps = 11/365 (3%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ-- 266
           V P+L T+N+++   C    + +A +V   + A G+ P VVTYNTI   Y + G A +  
Sbjct: 181 VSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMY 240

Query: 267 -AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
             + ++ EM   G+ PN  T  ++++GYCK+     A+R    MK+ G+  ++V ++ L+
Sbjct: 241 HVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALV 300

Query: 326 KGFV-EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
            G   E    +GV +++  MK+  + P++ T ++++N +   G M   +   D M +  +
Sbjct: 301 WGLCSEGKVEEGV-KLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNV 359

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           KP+   Y+IL  GY R  + + A  +   M   G  PN  I+  +I+G+  +G       
Sbjct: 360 KPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSG 419

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           + D+M   GV  ++ T+  L+       +  +A ++L  M   G+ P   T+  +     
Sbjct: 420 LLDEMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYC 479

Query: 505 ATGLTKEAKRILSKI-KNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQ---IPN 560
             G  K A  I +++ K K+R N +    ++ ++ L R+   E T      +L+   +PN
Sbjct: 480 EKGNIKSAYEIRTRMEKGKKRANVV--TYNVFIKCLCRMGKMEETNELLNEMLEKGLVPN 537

Query: 561 VVSSD 565
            V+ D
Sbjct: 538 GVTYD 542



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 147/314 (46%), Gaps = 5/314 (1%)

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
           +P+  + N L+ A    + +  A           + PD+ T+N + +   + G+  +A +
Sbjct: 147 RPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGD 206

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR---FARTMKEYGVHPNLVIFNLLIK 326
           V  ++   G+ P+  T   II GYCK G+           + M E G+ PN V FN+L+ 
Sbjct: 207 VAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVN 266

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
           G+ +  +      V   MK+  +   V+TYS ++    + G +++  ++ D+M   G+ P
Sbjct: 267 GYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVP 326

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           +    + +  G+ ++     AE  + +M +    PNVV +T ++ G+     M  A+ V 
Sbjct: 327 NLATLNSVLNGFCKKGMMTDAEGWIDSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVK 386

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRA-EEILQIMKAFGVHPQKSTFLLLAEARRA 505
           + M   GV PN + +  L+ G++     WR+   +L  M+  GV     T+ +L  A   
Sbjct: 387 EAMSGKGVRPNARIYNCLIAGFTR-NGDWRSVSGLLDEMRMKGVRADIVTYNVLIGALCV 445

Query: 506 TGLTKEAKRILSKI 519
            G  ++A ++L ++
Sbjct: 446 KGEVRKAVKLLDEM 459



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 123/260 (47%), Gaps = 1/260 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + + L+  L   GK +E   + + + + G  P+L T  ++L     +         +
Sbjct: 292 SVVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWI 351

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +E+  + P+ + +  +++ +     M++A+     M   G+ P    YN LI G+   
Sbjct: 352 DSMEQKNVKPNVVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRN 411

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G       LLD M  +G V+ ++ TYNVL+ A C +  + +A  ++ +M   G++P  +T
Sbjct: 412 GDWRSVSGLLDEMRMKG-VRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLT 470

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YNTI   Y + G    A E+   ME    + N  T  + I   C+ GK++E       M 
Sbjct: 471 YNTIINGYCEKGNIKSAYEIRTRMEKGKKRANVVTYNVFIKCLCRMGKMEETNELLNEML 530

Query: 311 EYGVHPNLVIFNLLIKGFVE 330
           E G+ PN V ++ + +G +E
Sbjct: 531 EKGLVPNGVTYDTIKEGMME 550



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/270 (22%), Positives = 124/270 (45%), Gaps = 3/270 (1%)

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P +     +A A A    A     ++    H   +P+  +   ++S      ++  A R 
Sbjct: 113 PLIADLLVLALASASQPLASYEAFLLAGDAHPRHRPSAFSVNRLLSALVAAERVDLAERA 172

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW-- 363
            +      V P+L  FN++I G  +        +V   ++ + + P V+TY+TI++ +  
Sbjct: 173 FKAALRRRVSPDLFTFNIVISGLCKTGQLRKAGDVAKDIRAWGLAPSVVTYNTIIDGYCK 232

Query: 364 -STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              AG M     +  +M +AGI P+   +++L  GY ++     A  +   M + G   +
Sbjct: 233 RGRAGRMYHVDALLKEMVEAGISPNEVTFNVLVNGYCKDSNTAAAVRVFEEMKQQGIAAS 292

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           VV ++ ++ G CS+G ++  +++ D+M + G+ PNL T  +++ G+ +      AE  + 
Sbjct: 293 VVTYSALVWGLCSEGKVEEGVKLVDEMKDLGLVPNLATLNSVLNGFCKKGMMTDAEGWID 352

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
            M+   V P   T+ +L +  R     K+A
Sbjct: 353 SMEQKNVKPNVVTYTILVDGYRRLDKMKDA 382



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 1/191 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++      K ++A A+   +   G +P+   Y  L+A  T    + S+  ++ 
Sbjct: 363 VVTYTILVDGYRRLDKMKDALAVKEAMSGKGVRPNARIYNCLIAGFTRNGDWRSVSGLLD 422

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+  D + +N +I A    G + +A+    +M   GL P   TYNT+I GY   G
Sbjct: 423 EMRMKGVRADIVTYNVLIGALCVKGEVRKAVKLLDEMLMVGLEPVHLTYNTIINGYCEKG 482

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + + ++   M + G  + N+ TYNV ++  C    + E   ++++M   G+ P+ VTY
Sbjct: 483 NIKSAYEIRTRMEK-GKKRANVVTYNVFIKCLCRMGKMEETNELLNEMLEKGLVPNGVTY 541

Query: 252 NTIATAYAQNG 262
           +TI     + G
Sbjct: 542 DTIKEGMMEKG 552



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/177 (24%), Positives = 80/177 (45%), Gaps = 3/177 (1%)

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
           R  P   + + +++A   A  +D  +  F    +  + PD   ++I+  G  +  +  KA
Sbjct: 145 RHRPSAFSVNRLLSALVAAERVDLAERAFKAALRRRVSPDLFTFNIVISGLCKTGQLRKA 204

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV---FDKMCEHGVSPNLKTFETL 464
            ++   +   G  P+VV + TII G+C  G   R   V     +M E G+SPN  TF  L
Sbjct: 205 GDVAKDIRAWGLAPSVVTYNTIIDGYCKRGRAGRMYHVDALLKEMVEAGISPNEVTFNVL 264

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           + GY +      A  + + MK  G+     T+  L     + G  +E  +++ ++K+
Sbjct: 265 VNGYCKDSNTAAAVRVFEEMKQQGIAASVVTYSALVWGLCSEGKVEEGVKLVDEMKD 321


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/422 (25%), Positives = 208/422 (49%), Gaps = 1/422 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ L +  +  +A+ +F+ ++     PSL+TY TL+              +  +++ + 
Sbjct: 220 LIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADH 279

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++P  I FN ++    ++G +E+A +   +MK+ G  P   T++ L  GY    K E ++
Sbjct: 280 IEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAAL 339

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            + +     G VK N  T ++L+ A C E  I +A  ++ +  A G+ P+ V YNT+   
Sbjct: 340 GVYETAVDSG-VKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDG 398

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G+   A   I  ME  G++P+      +I  +C+ G+++ A +    MK  GV P+
Sbjct: 399 YCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPS 458

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +  +N+LI G+    + D   ++L  M++    P+V++Y T++N       + + + +  
Sbjct: 459 VETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKR 518

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           DM   G+ P    Y++L  G   + + E A      M++ G   N+V + T+I G    G
Sbjct: 519 DMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTG 578

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +  A ++  ++   G+ P++ T+ +L+ GY  A    R   + + MK  G+ P   T+ 
Sbjct: 579 KLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYH 638

Query: 498 LL 499
           LL
Sbjct: 639 LL 640



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 208/442 (47%), Gaps = 36/442 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S+T L++ L++  + +    +F N++E   +PS   Y   + A            + +++
Sbjct: 146 SLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRM 205

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + + + P    +N +I+   +   M +A   F +M    L P+  TYNTLI GY  AG P
Sbjct: 206 KHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNP 265

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E+S K+ + M +  +++P+L T+N L++       + +A NV+ +M   G  PD  T++ 
Sbjct: 266 EKSFKVRERM-KADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSI 324

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   Y+ N +A+ A  V      +GV+ N  TC I+++  CKEGKI++A          G
Sbjct: 325 LFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKG 384

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           + PN VI+N +I G+     R G D V A MK                            
Sbjct: 385 LVPNEVIYNTMIDGYC----RKG-DLVGARMK---------------------------- 411

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
              + M K G+KPD  AY+ L + +    E E AE+ +  M   G  P+V  +  +I G+
Sbjct: 412 --IEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGY 469

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
                 D+  ++  +M ++G  PN+ ++ TL+    +  +   A+ + + M+  GV P+ 
Sbjct: 470 GRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKV 529

Query: 494 STFLLLAEARRATGLTKEAKRI 515
             + +L +   + G  ++A R 
Sbjct: 530 RIYNMLIDGCCSKGKIEDAFRF 551



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 200/450 (44%), Gaps = 47/450 (10%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           MN  +C      + L+N+L + GK ++A+ I    +  G  P+ V Y T++     +   
Sbjct: 352 MNAYTC------SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDL 405

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                 +  +E+ GM PD + +N +I  F E G ME A     KMK  G++P+  TYN L
Sbjct: 406 VGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465

Query: 184 IKGYGIAGKPEESVKLLDLMSREGN----------------------------------V 209
           I GYG   + ++   +L  M   G                                   V
Sbjct: 466 IGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGV 525

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE 269
            P +R YN+L+   C++  I +A+    +M   G++ ++VTYNT+    +  G+  +AE+
Sbjct: 526 SPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAED 585

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +++E+   G++P+  T   +ISGY   G ++  +     MK  G+ P L  ++LLI    
Sbjct: 586 LLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLIS--- 642

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
            +  ++G++    L  E  + PD++ Y+ +++ ++  G M+K   +   M +  I  D  
Sbjct: 643 -LCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKT 701

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+ L  G ++  +  +   L+  M      P    +  I+ G C       A   + +M
Sbjct: 702 TYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVKDYMSAYVWYREM 761

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            E G   ++     L+ G  E    WR++E
Sbjct: 762 QEKGFLLDVCIGNELVSGLKEE---WRSKE 788



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/348 (25%), Positives = 167/348 (47%), Gaps = 1/348 (0%)

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKP 211
            +ES  + EA D F+ ++  G+ P++ +  TL+  + +  K       + L   E + +P
Sbjct: 119 LNESKMISEAADLFFALRNEGIYPSSDSL-TLLLDHLVKTKQFRVTINVFLNILESDFRP 177

Query: 212 NLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVI 271
           +   Y   ++A     ++ +   + ++M    + P V  YN +     +    + AE++ 
Sbjct: 178 SKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLF 237

Query: 272 VEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            EM    + P+  T   +I GYCK G  +++ +    MK   + P+L+ FN L+KG  + 
Sbjct: 238 DEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKA 297

Query: 332 MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
              +  + VL  MK+    PD  T+S + + +S+    +    +++    +G+K +A+  
Sbjct: 298 GMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTC 357

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           SIL     +E + EKAEE+L   +  G  PN VI+ T+I G+C  G +  A    + M +
Sbjct: 358 SILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEK 417

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
            G+ P+   +  L+  + E  +   AE+ +  MK  GV P   T+ +L
Sbjct: 418 QGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNIL 465


>gi|413955492|gb|AFW88141.1| hypothetical protein ZEAMMB73_138069 [Zea mays]
          Length = 1091

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 220/482 (45%), Gaps = 47/482 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +VR+ + LM +  ++        + N +   G KP++ +YT  +  L    RF+  + I+
Sbjct: 205 SVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYHIL 264

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++E++G  PD +    +I    ++G + +A   FWKMK S   P   TY TL+   G +
Sbjct: 265 GKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDS 324

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +  V++ + M  +G    N+ +Y  +V A C    + EA  V  +M   GM P+  +
Sbjct: 325 GDSQSVVEVWNAMVADG-YNDNIVSYTAVVDALCQVGRVDEALAVFDEMKEKGMSPEQYS 383

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++ + + +    D+A E+   M   G  PNG T  + I+ Y K G+  +A++    MK
Sbjct: 384 YNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMK 443

Query: 311 EYGVHP-----NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
             G+ P     N V+++L   G + +  R     V   +K   V+PD ITY+ ++   S 
Sbjct: 444 SKGIVPDVAAANAVLYSLAGSGRLGMAKR-----VFYELKAMGVSPDTITYTMMIKCCSK 498

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHA----------------------------------- 390
           A   D+    F DM ++G  PD  A                                   
Sbjct: 499 ASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGT 558

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+ L  G  RE + ++  +LL  M  + + PN++ + T++     +G ++ AI++   M 
Sbjct: 559 YNTLLSGLGREGKVKEVMQLLEEMTRTIYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMT 618

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           E G +P+L ++ T+M+G  +  +   A  +   MK   + P  +T   +  +    GL K
Sbjct: 619 EKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMK 677

Query: 511 EA 512
           EA
Sbjct: 678 EA 679



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 123/538 (22%), Positives = 226/538 (42%), Gaps = 77/538 (14%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   ++ SL   G+   A+ +F  L   G  P  +TYT ++   +   + +   +  S
Sbjct: 451 VAAANAVLYSLAGSGRLGMAKRVFYELKAMGVSPDTITYTMMIKCCSKASKADEAMNFFS 510

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + E+G  PD +  N++I+   + G   EA   F K+KE  + PT  TYNTL+ G G  G
Sbjct: 511 DMVESGCVPDVLALNSLIDTLYKGGKGNEAWQLFHKLKEMKIEPTNGTYNTLLSGLGREG 570

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E ++LL+ M+R     PNL TYN ++        +  A ++++ M   G  PD+ +Y
Sbjct: 571 KVKEVMQLLEEMTRT-IYPPNLITYNTVLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSY 629

Query: 252 N----------------------------------TIATAYAQNGEADQAEEVIVE---- 273
           N                                  TI  ++ +NG   +A   + E    
Sbjct: 630 NTVMYGLIKEERLEEAFRMFCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILK 689

Query: 274 -----------------MEHNGVQP------NGRTCGIIISGY---------CKEGKIKE 301
                            ++  GV+       N  + GI+++ +         CK  K  E
Sbjct: 690 AGCNVDKSSFHSLMEGILKKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALE 749

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A +     K  GV      +N LI+G V+    D  +++   MK     PD  TY+ I++
Sbjct: 750 AHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILD 809

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
           A   +  +++  ++  +M + G +     Y+ +  G V+ +  E+A +L   ++  GF P
Sbjct: 810 AMGKSMRVEEMLKVQKEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSP 869

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
               +  ++ G    G M  A  +F++M E+G  PN   +  L+ G+  A       ++ 
Sbjct: 870 TPCTYGPLLDGLLKSGKMVDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLF 929

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESL 539
           + M   G++P   ++ +L +     G      R+   +    + +E+  E D+ V +L
Sbjct: 930 EKMVEQGINPDIKSYTILIDTLCTAG------RLNDGLCYFRQLHELGLEPDLIVYNL 981



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 119/520 (22%), Positives = 226/520 (43%), Gaps = 91/520 (17%)

Query: 38  NPGEKKQLYSNS--KPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIF 95
           +P E  +L++ +  +PT       C++            M +LM +    G+  +   +F
Sbjct: 80  DPAEALELFTAAARQPTKVHTTESCNY------------MLELMRA---HGRVGDMAQVF 124

Query: 96  NNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSES 155
           + + +   K ++ T+ T+   + ++    S    +  + E GM  ++  +N +I    +S
Sbjct: 125 DLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKS 184

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
           G   EAM+ +  M E G++P+  TY+ L+  +G     +  + LL+ M   G VKPN+ +
Sbjct: 185 GFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARG-VKPNVYS 243

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           Y + +R         EA++++ KM  SG KPDVVT+  I       G    A+ V  +M+
Sbjct: 244 YTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMK 303

Query: 276 HNGVQPNGRT-------CG--------------IIISGY--------------CKEGKIK 300
            +  +P+  T       CG              ++  GY              C+ G++ 
Sbjct: 304 ASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVD 363

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFV--EIMDR---------------DGVDEVLAL 343
           EAL     MKE G+ P    +N LI GF+  ++ DR               +G   VL +
Sbjct: 364 EALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFI 423

Query: 344 ------------------MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                             MK   + PDV   + ++ + + +G +   K +F ++   G+ 
Sbjct: 424 NYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELKAMGVS 483

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   Y+++ K   +  + ++A      M+ESG  P+V+   ++I      G  + A ++
Sbjct: 484 PDTITYTMMIKCCSKASKADEAMNFFSDMVESGCVPDVLALNSLIDTLYKGGKGNEAWQL 543

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           F K+ E  + P   T+ TL+ G     +  + +E++Q+++
Sbjct: 544 FHKLKEMKIEPTNGTYNTLLSGLG---REGKVKEVMQLLE 580



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/454 (22%), Positives = 206/454 (45%), Gaps = 8/454 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTT----LLAALTIQKRFNS 125
           R V     +++ L     P EA  +F        +P+ V  T     +L  +    R   
Sbjct: 63  RRVVGTDSVVHMLRSAPDPAEALELFT---AAARQPTKVHTTESCNYMLELMRAHGRVGD 119

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
           +  +   +++  +  +   F  +       G +  A      M+E+G++    TYN LI 
Sbjct: 120 MAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIY 179

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
               +G   E++++   M  +G + P++RTY+VL+ A+  ++++     ++++M A G+K
Sbjct: 180 FLVKSGFDAEAMEVYKAMVEDG-ISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVK 238

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P+V +Y        Q    D+A  ++ +ME +G +P+  T  +II   C  G++ +A   
Sbjct: 239 PNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAV 298

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              MK     P+ V +  L+    +  D   V EV   M     N ++++Y+ +++A   
Sbjct: 299 FWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQ 358

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G +D+   +FD+M + G+ P+ ++Y+ L  G+++    ++A EL   M   G  PN   
Sbjct: 359 VGRVDEALAVFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYT 418

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
               I+ +   G   +AI+ ++ M   G+ P++     +++  + + +   A+ +   +K
Sbjct: 419 HVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLYSLAGSGRLGMAKRVFYELK 478

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           A GV P   T+ ++ +         EA    S +
Sbjct: 479 AMGVSPDTITYTMMIKCCSKASKADEAMNFFSDM 512



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 196/440 (44%), Gaps = 3/440 (0%)

Query: 62   FC-MNKESCRTVRSMTKLMNSLIERGKPQEA-QAIFNNLIEGGHKPSLVTYTTLLAALTI 119
            FC M K       ++  ++ S ++ G  +EA   +   +++ G      ++ +L+  +  
Sbjct: 649  FCQMKKILAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILK 708

Query: 120  QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
            +            +   G+  +  F   +I    +     EA   F K K  G++  T +
Sbjct: 709  KAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGS 768

Query: 180  YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
            YN+LI+G       + +  L   M R G   P+  TYN+++ A      + E   V  +M
Sbjct: 769  YNSLIRGLVDENLIDIAEDLFTEMKRLG-CGPDEFTYNLILDAMGKSMRVEEMLKVQKEM 827

Query: 240  AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
               G +   VTYNTI +   ++   +QA ++   +   G  P   T G ++ G  K GK+
Sbjct: 828  HRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKSGKM 887

Query: 300  KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
             +A      M EYG  PN  I+N+L+ G     + + V ++   M E  +NPD+ +Y+ +
Sbjct: 888  VDAENLFNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTIL 947

Query: 360  MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
            ++   TAG ++     F  + + G++PD   Y++L  G  + +  E+A  L   M + G 
Sbjct: 948  IDTLCTAGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGI 1007

Query: 420  HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
             PN+  + ++I      G    A ++++++   G  P++ T+  L+ GYS +     A  
Sbjct: 1008 IPNLYTYNSLILHLGKAGKAAEAAQMYEELLRKGWKPSVFTYNALIRGYSVSGSTDNAYA 1067

Query: 480  ILQIMKAFGVHPQKSTFLLL 499
                M   G  P  ST++ L
Sbjct: 1068 AYGQMIVGGCQPNSSTYMQL 1087



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 97/421 (23%), Positives = 199/421 (47%), Gaps = 5/421 (1%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            +++ L + G+   A  +  ++ E G  P L +Y T++  L  ++R      +  Q+++  
Sbjct: 597  VLDCLSKNGEVNCAIDMLYSMTEKGCAPDLSSYNTVMYGLIKEERLEEAFRMFCQMKKI- 655

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWK-MKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            + PD      ++ +F ++G M+EA+ T  + + ++G     S++++L++G       E+S
Sbjct: 656  LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKAGCNVDKSSFHSLMEGILKKAGVEKS 715

Query: 197  VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            ++  + ++  G +  N      L+R  C  K   EA  + +K    G+     +YN++  
Sbjct: 716  IEFAENIASRG-ILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIR 774

Query: 257  AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
                    D AE++  EM+  G  P+  T  +I+    K  +++E L+  + M   G   
Sbjct: 775  GLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRVEEMLKVQKEMHRKGYES 834

Query: 317  NLVIFNLLIKGFVEIMDRD-GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
              V +N +I G V+    +  +D    LM E   +P   TY  +++    +G M   + +
Sbjct: 835  TYVTYNTIISGLVKSKRLEQAIDLYYNLMSE-GFSPTPCTYGPLLDGLLKSGKMVDAENL 893

Query: 376  FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            F++M + G +P+   Y+IL  G+      E   +L   M+E G +P++  +T +I   C+
Sbjct: 894  FNEMLEYGCEPNCTIYNILLNGHRIAGNTENVCQLFEKMVEQGINPDIKSYTILIDTLCT 953

Query: 436  DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
             G ++  +  F ++ E G+ P+L  +  L+ G  ++ +   A  +   MK  G+ P   T
Sbjct: 954  AGRLNDGLCYFRQLHELGLEPDLIVYNLLIDGLGKSERIEEAVSLFNEMKKKGIIPNLYT 1013

Query: 496  F 496
            +
Sbjct: 1014 Y 1014



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 92/378 (24%), Positives = 176/378 (46%), Gaps = 2/378 (0%)

Query: 146 NAVINAFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           ++V++    + +  EA++ F    ++     TT + N +++     G+  +  ++ DLM 
Sbjct: 69  DSVVHMLRSAPDPAEALELFTAAARQPTKVHTTESCNYMLELMRAHGRVGDMAQVFDLMQ 128

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           ++  VK N+ T+  +      E  +  A   +  M  +GM  +  TYN +     ++G  
Sbjct: 129 KQ-VVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYTYNGLIYFLVKSGFD 187

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A EV   M  +G+ P+ RT  +++  + K+  +   L     M+  GV PN+  + + 
Sbjct: 188 AEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLLNEMEARGVKPNVYSYTIC 247

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I+   +    D    +L  M++    PDV+T++ I+     AG +   K +F  M  +  
Sbjct: 248 IRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDAGRLSDAKAVFWKMKASDQ 307

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           KPD   Y  L        + +   E+   M+  G++ N+V +T ++   C  G +D A+ 
Sbjct: 308 KPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSYTAVVDALCQVGRVDEALA 367

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           VFD+M E G+SP   ++ +L+ G+ +A    RA E+   M A G  P   T +L      
Sbjct: 368 VFDEMKEKGMSPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYG 427

Query: 505 ATGLTKEAKRILSKIKNK 522
            +G + +A +    +K+K
Sbjct: 428 KSGQSLKAIQRYEHMKSK 445



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 70/271 (25%), Positives = 118/271 (43%), Gaps = 8/271 (2%)

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
           +G      +V   M+   V+ N  T   I  G   EG ++ A      M+E G+  N   
Sbjct: 114 HGRVGDMAQVFDLMQKQVVKTNVGTFATIFGGVGVEGGLRSAPVALPVMREAGMSLNAYT 173

Query: 321 FNLLIKGFVEIMDRDGVD----EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +N    G +  + + G D    EV   M E  ++P V TYS +M A+     +D    + 
Sbjct: 174 YN----GLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVAFGKKRDVDTVLWLL 229

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           ++M   G+KP+ ++Y+I  +   +    ++A  +L  M +SG  P+VV  T II   C  
Sbjct: 230 NEMEARGVKPNVYSYTICIRVLGQAARFDEAYHILGKMEDSGCKPDVVTHTVIIQVLCDA 289

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G +  A  VF KM      P+  T+ TL+    ++       E+   M A G +    ++
Sbjct: 290 GRLSDAKAVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVVEVWNAMVADGYNDNIVSY 349

Query: 497 LLLAEARRATGLTKEAKRILSKIKNKERTNE 527
             + +A    G   EA  +  ++K K  + E
Sbjct: 350 TAVVDALCQVGRVDEALAVFDEMKEKGMSPE 380


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 204/440 (46%), Gaps = 2/440 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK   A   F+ L   G  P  VT+T+++  L   +R +    +  +++ N   P    +
Sbjct: 286 GKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYAY 345

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +I  +   G   EA     + K  G  P+   YN ++   G  GK EE++++L+ M  
Sbjct: 346 NTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKM 405

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +    PNL +YN+L+   C    +  A  V   M  +G+ P+++T N +     +    D
Sbjct: 406 DA--APNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLD 463

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  + + ++H    P+  T   +I G  + GK+ +A      M + G  PN V++  LI
Sbjct: 464 EACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLI 523

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           + F +   ++   ++   M     +PD++  +  M+    AG ++K + +F+++   G+ 
Sbjct: 524 RNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLT 583

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD  +YSIL  G V+    +   +L   M E G H +   +  +I G+C  G +++A ++
Sbjct: 584 PDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQL 643

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
            ++M   G+ P + T+ +++ G ++  +   A  + +  K+  V      +  L +    
Sbjct: 644 LEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGK 703

Query: 506 TGLTKEAKRILSKIKNKERT 525
            G   EA  IL ++  K  T
Sbjct: 704 VGRIDEAYLILEELMQKGLT 723



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/436 (23%), Positives = 212/436 (48%), Gaps = 7/436 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M  ++   + S   L++ L + G+ + A  + +++ E G  P+++T   ++  L   +R 
Sbjct: 403 MKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRL 462

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +   SI   ++     PDS+ F ++I+     G + +A   + KM +SG TP    Y +L
Sbjct: 463 DEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSL 522

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I+ +   G+ E+  K+   M   G   P+L   N  +        I +   +  ++ A G
Sbjct: 523 IRNFFKCGRKEDGHKIYKEMMHRG-CSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQG 581

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           + PDV +Y+ +     + G +    ++  EM+  G+  + R   I+I G+CK GK+ +A 
Sbjct: 582 LTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAY 641

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIM 360
           +    MK  G+ P +V +  +I G  +I   D +DE   L +E +   V+ +V+ YS+++
Sbjct: 642 QLLEEMKTKGLQPTVVTYGSVIDGLAKI---DRLDEAYMLFEEAKSKAVDLNVVVYSSLI 698

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           + +   G +D+   I +++ + G+ P+ + ++ L    V+ +E ++A      M      
Sbjct: 699 DGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCP 758

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN V ++ +++G C     ++A   + +M + G+ PN  T+ T++ G +       A+++
Sbjct: 759 PNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDL 818

Query: 481 LQIMKAFGVHPQKSTF 496
            +  K+ G  P  + +
Sbjct: 819 FERFKSSGGIPDSACY 834



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 101/444 (22%), Positives = 197/444 (44%), Gaps = 2/444 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++  L  +GK +EA  I   + +    P+L +Y  L+  L       +   +   ++E G
Sbjct: 383 ILTCLGRKGKVEEALRILEAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAG 441

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+ I  N +I+   ++  ++EA   F  +     TP + T+ +LI G G  GK  ++ 
Sbjct: 442 LFPNIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAY 501

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L + M   G   PN   Y  L+R +       +   +  +M   G  PD++  N     
Sbjct: 502 MLYEKMLDSGQT-PNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDC 560

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             + GE ++   +  E++  G+ P+ R+  I+I G  K G  K+  +    MKE G+H +
Sbjct: 561 VFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLD 620

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
              +N++I GF +    +   ++L  MK   + P V+TY ++++  +    +D+   +F+
Sbjct: 621 TRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFE 680

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +     +  +   YS L  G+ +    ++A  +L  +++ G  PN   +  ++       
Sbjct: 681 EAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAE 740

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D A+  F  M      PN  T+  ++ G  + R+  +A    Q M+  G+ P   T+ 
Sbjct: 741 EIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKPNTITYT 800

Query: 498 LLAEARRATGLTKEAKRILSKIKN 521
            +       G   EAK +  + K+
Sbjct: 801 TMISGLARVGNVLEAKDLFERFKS 824



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/345 (21%), Positives = 154/345 (44%), Gaps = 3/345 (0%)

Query: 148 VINAFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           V+       ++  A+  F W  +++    +   YN L+         E   ++L+ MS  
Sbjct: 102 VVGVIRRLKDVRVALHYFRWVERKTKQLHSPEAYNALLMLMARTRNLEYLEQILEEMSMA 161

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G   P+  T   +V ++   + + EA+ V+  M     +P    Y T+  A +   EAD 
Sbjct: 162 G-FGPSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADP 220

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
              ++ +M+  G +        +I  + +EG++  AL     MK    + +LV++N+ I 
Sbjct: 221 MLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCID 280

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
            F ++   D   +    +K   + PD +T+++++     A  +D+  E+F+++      P
Sbjct: 281 CFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVP 340

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
             +AY+ +  GY    +  +A  LL      G  P+V+ +  I++     G ++ A+ + 
Sbjct: 341 CVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIL 400

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           + M +   +PNL ++  L+    +A +   A ++   MK  G+ P
Sbjct: 401 EAM-KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFP 444



 Score = 89.4 bits (220), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 59/270 (21%), Positives = 118/270 (43%)

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +    A+    +  E+++ EM   G  P+  TC  +++ + K  K++EA     TM+
Sbjct: 135 YNALLMLMARTRNLEYLEQILEEMSMAGFGPSNNTCIEMVASFVKSRKLREAFGVIETMR 194

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           ++   P    +  LI       + D +  +L  M+E      V  ++T++  ++  G +D
Sbjct: 195 KFKFRPAYSAYTTLIGALSAAHEADPMLTLLRQMQEIGYEVTVHLFTTLICVFAREGRVD 254

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               + D+M       D   Y++    + +  + + A +    +   G  P+ V FT++I
Sbjct: 255 AALSLLDEMKSNSFNADLVLYNVCIDCFGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMI 314

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
              C    +D A+E+F+++  +   P +  + T++ GY    +   A  +L+  K  G  
Sbjct: 315 GVLCKAERVDEAVELFEELDSNKSVPCVYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCI 374

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           P    +  +       G  +EA RIL  +K
Sbjct: 375 PSVIAYNCILTCLGRKGKVEEALRILEAMK 404



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 50/241 (20%), Positives = 109/241 (45%), Gaps = 1/241 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   +++ L +  +  EA  +F          ++V Y++L+       R +  + I+
Sbjct: 655 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLIL 714

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G+ P++  +N +++A  ++  ++EA+  F  MK     P   TY+ ++ G    
Sbjct: 715 EELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKV 774

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K  ++      M ++G +KPN  TY  ++       N+ EA ++  +  +SG  PD   
Sbjct: 775 RKFNKAFVFWQEMQKQG-LKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSAC 833

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN +    +   +A  A  +  E    G +   +TC +++    K   +++A      ++
Sbjct: 834 YNAMIEGLSNANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLR 893

Query: 311 E 311
           E
Sbjct: 894 E 894


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 213/448 (47%), Gaps = 10/448 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +     ++ SL++      A ++F  L   G KPS+VT T L+           + SI++
Sbjct: 10  ILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILT 69

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ + G +P+SI F  +I     +G   EA+     +   G      +Y  L+ G    G
Sbjct: 70  KILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMG 129

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +   ++++L    R+  V  ++  Y+ ++ + C  K +T+A+ +  +M A G+ P+V T+
Sbjct: 130 ETRAAMQML----RKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTF 185

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +  A  ++ +  QA  ++  M   GV+PN  T G I+ GYC   ++ +AL     M +
Sbjct: 186 SILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQ 245

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGF 368
            GV PN+  +N++I G  +   +  VDE + L KE    ++NPDV+TY+ +++     G 
Sbjct: 246 EGVEPNVWCYNIIINGLCK---KKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGK 302

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +    E+ D+M   G   D   Y+ L     +    ++A  L+  + + G  PNV  +TT
Sbjct: 303 ISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTT 362

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G C DG ++ A  +F ++   G    + T+  ++ G  +      A  +L  M+   
Sbjct: 363 LIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNA 422

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRIL 516
             P   ++  +  A    G T +  ++L
Sbjct: 423 CIPDAVSYETIIYALSEKGETVKTNKLL 450



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/419 (23%), Positives = 206/419 (49%), Gaps = 4/419 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ ++T LMN     G      +I   +++ G++P+ +T+TTL+  + +  +        
Sbjct: 44  SIVTLTILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFH 103

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             V  +G   D + +  ++N   + G    AM     ++++ +      Y+T+I      
Sbjct: 104 DHVVAHGFKLDQVSYAILMNGLCKMGETRAAMQM---LRKTWVNADVVMYSTIIDSLCKG 160

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
               ++ +L   M  +G + PN+ T+++LV A C ++   +A N++  M   G+KP+VVT
Sbjct: 161 KFVTDAYRLYSEMIAKG-IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVT 219

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y  I   Y    + ++A  +   M   GV+PN     III+G CK+ ++ EA+   + M 
Sbjct: 220 YGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMH 279

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
              ++P++V +N+LI G  ++       E++  M+      D+ITY+++++A      +D
Sbjct: 280 WKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLD 339

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +  ++   GI+P+   Y+ L  G  ++   E A  +   ++  G+H  V  +  +I
Sbjct: 340 QAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMI 399

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           +G C  G  D A+ +  +M ++   P+  ++ET+++  SE  +  +  ++L  M   G+
Sbjct: 400 NGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGL 458



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 196/417 (47%), Gaps = 4/417 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P ++ +  +LA+L     + +  S+  Q+E NG+ P  +    ++N +  +G +      
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
             K+ + G  P + T+ TLIKG  + G+  E++   D +   G  K +  +Y +L+   C
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHG-FKLDQVSYAILMNGLC 126

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
               + E    M  +  + +  DVV Y+TI  +  +      A  +  EM   G+ PN  
Sbjct: 127 K---MGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVY 183

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T  I++   CK+ K K+A+     M + GV PN+V +  ++ G+  +   +    +  +M
Sbjct: 184 TFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVM 243

Query: 345 KEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP 404
            +  V P+V  Y+ I+N       +D+   +F +M    I PD   Y+IL  G  +  + 
Sbjct: 244 VQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKI 303

Query: 405 EKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
             + EL+  M   G   +++ + +++   C +  +D+AI +  ++ + G+ PN+ T+ TL
Sbjct: 304 STSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTL 363

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           + G  +  +   A  I Q +   G H    T+ ++       GL  EA  +LS++++
Sbjct: 364 IDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMED 420



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 69/318 (21%), Positives = 157/318 (49%), Gaps = 3/318 (0%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P +  +N ++ +     +   A ++  ++  +G+KP +VT   +   Y   G       +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + ++   G +PN  T   +I G C  G+  EAL F   +  +G   + V + +L+ G  +
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           + +       + ++++  VN DV+ YSTI+++     F+     ++ +M   GI P+ + 
Sbjct: 128 MGETRAA---MQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYT 184

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           +SIL     ++++ ++A  LL  M++ G  PNVV +  I+ G+C    +++A+ +F+ M 
Sbjct: 185 FSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMV 244

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTK 510
           + GV PN+  +  ++ G  + ++   A  + + M    ++P   T+ +L +     G   
Sbjct: 245 QEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKIS 304

Query: 511 EAKRILSKIKNKERTNEM 528
            +  ++ ++++  +T ++
Sbjct: 305 TSLELVDEMRSIGKTVDI 322



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/349 (21%), Positives = 163/349 (46%), Gaps = 4/349 (1%)

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
           TP    +N ++           ++ L   +   G +KP++ T  +L+  +C+   IT  +
Sbjct: 7   TPPILQFNHILASLVKINHYPTAISLFRQLEFNG-IKPSIVTLTILMNCYCHTGGITFLF 65

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
           +++ K+   G +P+ +T+ T+      NG+A +A      +  +G + +  +  I+++G 
Sbjct: 66  SILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGL 125

Query: 294 CKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV 353
           CK G+ + A++  R   +  V+ ++V+++ +I    +         + + M    + P+V
Sbjct: 126 CKMGETRAAMQMLR---KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNV 182

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
            T+S +++A        +   +   M K G+KP+   Y  +  GY    +  KA  +   
Sbjct: 183 YTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNV 242

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M++ G  PNV  +  II+G C    +D A+ +F +M    ++P++ T+  L+ G  +  +
Sbjct: 243 MVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGK 302

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
              + E++  M++ G      T+  L  A        +A  ++ +IK++
Sbjct: 303 ISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQ 351



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 54/103 (52%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++ L + G+ ++A  IF  ++  G+  ++ TY  ++  L  +  F+   +++S
Sbjct: 357 VCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLS 416

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLT 174
           ++E+N   PD++ +  +I A SE G   +       M   GL+
Sbjct: 417 RMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLS 459


>gi|15225055|ref|NP_181456.1| lateral organ junction protein [Arabidopsis thaliana]
 gi|75100007|sp|O80958.1|PP194_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g39230, mitochondrial; AltName: Full=Protein LATERAL
           ORGAN JUNCTION; Flags: Precursor
 gi|3402682|gb|AAC28985.1| unknown protein [Arabidopsis thaliana]
 gi|330254554|gb|AEC09648.1| lateral organ junction protein [Arabidopsis thaliana]
          Length = 867

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/486 (24%), Positives = 237/486 (48%), Gaps = 38/486 (7%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T ++ + ++ G  +EA  + + ++  G   S++  T+L+              + +++EE
Sbjct: 314 TSVIVAFVKEGNMEEAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE 373

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ PD + F+ ++  F ++  ME+A++ + +MK   + P++   +T+I+G   A  PE 
Sbjct: 374 EGLAPDKVMFSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEA 433

Query: 196 SVKLLD------------------LMSREGNV---------------KPNLRTYNVLVRA 222
           ++++ +                  L  ++G V               +PN+  YN ++ A
Sbjct: 434 ALEIFNDSFESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLA 493

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C  KN+  A ++  +M   G++P+  TY+ +   + +N +   A +VI +M  +  + N
Sbjct: 494 HCRMKNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEAN 553

Query: 283 GRTCGIIISGYCKEG---KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
                 II+G CK G   K KE L+     K Y +  +   +N +I GFV++ D D   E
Sbjct: 554 EVIYNTIINGLCKVGQTSKAKEMLQNLIKEKRYSM--SCTSYNSIIDGFVKVGDTDSAVE 611

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
               M E   +P+V+T+++++N +  +  MD   E+  +M    +K D  AY  L  G+ 
Sbjct: 612 TYREMSENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFC 671

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           ++ + + A  L   + E G  PNV ++ ++ISG+ + G MD AI+++ KM   G+S +L 
Sbjct: 672 KKNDMKTAYTLFSELPELGLMPNVSVYNSLISGFRNLGKMDAAIDLYKKMVNDGISCDLF 731

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+ T++ G  +      A ++   +   G+ P +   ++L       G   +A ++L ++
Sbjct: 732 TYTTMIDGLLKDGNINLASDLYSELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEM 791

Query: 520 KNKERT 525
           K K+ T
Sbjct: 792 KKKDVT 797



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/397 (23%), Positives = 201/397 (50%), Gaps = 2/397 (0%)

Query: 84  ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
           ++GK   A +    + + G +P++V Y  ++ A    K  +   SI S++ E G++P++ 
Sbjct: 461 KQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNF 520

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            ++ +I+ F ++ + + A D   +M  S        YNT+I G    G+  ++ ++L  +
Sbjct: 521 TYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNL 580

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            +E     +  +YN ++  +    +   A     +M+ +G  P+VVT+ ++   + ++  
Sbjct: 581 IKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKSPNVVTFTSLINGFCKSNR 640

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D A E+  EM+   ++ +    G +I G+CK+  +K A      + E G+ PN+ ++N 
Sbjct: 641 MDLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYNS 700

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           LI GF  +   D   ++   M    ++ D+ TY+T+++     G ++   +++ ++   G
Sbjct: 701 LISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDLG 760

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
           I PD   + +L  G  ++ +  KA ++L  M +    PNV++++T+I+G   +G+++ A 
Sbjct: 761 IVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNEAF 820

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
            + D+M E G+  +   F  L+ G  E  +P  A +I
Sbjct: 821 RLHDEMLEKGIVHDDTVFNLLVSGRVE--KPPAASKI 855



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/451 (22%), Positives = 209/451 (46%), Gaps = 37/451 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V  +  +++SL+      EA+ I+N ++  G     VT   L+ A   +++      I  
Sbjct: 204 VPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFR 263

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK-ESGLTPTTSTYNTLIKGYGIA 190
           +V   G +PD + F+  + A  ++ ++  A+D   +M+ + G+  +  TY ++I  +   
Sbjct: 264 RVMSRGAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKE 323

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  EE+V+++D M   G +  ++     LV  +C    + +A ++ ++M   G+ PD V 
Sbjct: 324 GNMEEAVRVMDEMVGFG-IPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVM 382

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQP----------------------------- 281
           ++ +   + +N E ++A E  + M+   + P                             
Sbjct: 383 FSVMVEWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSF 442

Query: 282 -----NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
                +G  C  I   +CK+GK+  A  F + M++ G+ PN+V +N ++     + + D 
Sbjct: 443 ESWIAHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDL 502

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              + + M E  + P+  TYS +++ +          ++ + M  +  + +   Y+ +  
Sbjct: 503 ARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIIN 562

Query: 397 GYVREQEPEKAEELLMTMI-ESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
           G  +  +  KA+E+L  +I E  +  +   + +II G+   G  D A+E + +M E+G S
Sbjct: 563 GLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMSENGKS 622

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           PN+ TF +L+ G+ ++ +   A E+   MK+
Sbjct: 623 PNVVTFTSLINGFCKSNRMDLALEMTHEMKS 653



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 103/441 (23%), Positives = 207/441 (46%), Gaps = 13/441 (2%)

Query: 92  QAIFNNLIEG----GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNA 147
             + NNL++     G + +   +  LL A    KR +        + +  + P   + N 
Sbjct: 150 NVMVNNLVDSSKRFGFELTPRAFNYLLNAYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNN 209

Query: 148 VINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD-LMSRE 206
           V+++   S  ++EA + + KM   G+     T   L++      KPEE+VK+   +MSR 
Sbjct: 210 VLSSLVRSNLIDEAKEIYNKMVLIGVAGDNVTTQLLMRASLRERKPEEAVKIFRRVMSR- 268

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYNTIATAYAQNGEAD 265
              +P+   +++ V+A C   ++  A +++ +M    G+     TY ++  A+ + G  +
Sbjct: 269 -GAEPDGLLFSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNME 327

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  V+ EM   G+  +      +++GYCK  ++ +AL     M+E G+ P+ V+F++++
Sbjct: 328 EAVRVMDEMVGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMV 387

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           + F + M+ +   E    MK  R+ P  +   T++     A   +   EIF+D  ++ I 
Sbjct: 388 EWFCKNMEMEKAIEFYMRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFNDSFESWI- 446

Query: 386 PDAHAY--SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
             AH +  + +   + ++ + + A   L  M + G  PNVV +  ++   C   +MD A 
Sbjct: 447 --AHGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLAR 504

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
            +F +M E G+ PN  T+  L+ G+ + +    A +++  M A      +  +  +    
Sbjct: 505 SIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGL 564

Query: 504 RATGLTKEAKRILSKIKNKER 524
              G T +AK +L  +  ++R
Sbjct: 565 CKVGQTSKAKEMLQNLIKEKR 585


>gi|356561401|ref|XP_003548970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 447

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 192/395 (48%), Gaps = 1/395 (0%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           FN L+   H P ++ +  +L  L   K + +  S+  Q+E  G++P+ +  N +IN F  
Sbjct: 53  FNRLLLVRHTPPIIEFGKILGYLVKMKHYPTAISLSRQMEVKGIEPNLVTLNILINCFCH 112

Query: 155 SGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLR 214
            G M  +     K+ + G  P T T NTL+KG  + G+ + S+   D +  +G  + N  
Sbjct: 113 LGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKRSLHFHDKVVAQG-FQMNQV 171

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           +Y  L+   C       A  ++  +     +PDVV Y+TI     ++   +QA +   EM
Sbjct: 172 SYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEM 231

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G+ PN  T   +I G+C  G++  A      M    ++PN+  +N+LI    +    
Sbjct: 232 NARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEMILKNINPNVYTYNILIDALCKEGKV 291

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
               ++LA M       DV+TY+++++    +  +DK   +F  M K GI+P+ + Y+ L
Sbjct: 292 KEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTAL 351

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
             G  +    + A++L   ++  G   +V  +  +ISG C +G  D+A+ +  KM ++G 
Sbjct: 352 IDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGC 411

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
            PN  TF+ ++    E  +  +AE++L  M A G+
Sbjct: 412 IPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGL 446



 Score =  145 bits (366), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 162/346 (46%), Gaps = 36/346 (10%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           ++  LM  L  +G+ + +    + ++  G + + V+Y TLL  L           ++  +
Sbjct: 137 TLNTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMI 196

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+    PD + ++ +I+   +   + +A D F +M   G+ P   TY+TLI G+ +AG+ 
Sbjct: 197 EDRSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQL 256

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +  LL+ M  + N+ PN+ TYN+L+ A C E  + EA  ++ +M   G   DVVTYN+
Sbjct: 257 MGAFSLLNEMILK-NINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNS 315

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     ++   D+A  + ++M+  G+QPN  T   +I G CK G++K A +  +      
Sbjct: 316 VLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQ------ 369

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
                   +LL+KG                        DV TY+ +++     G  DK  
Sbjct: 370 --------HLLVKGCC---------------------IDVRTYNVMISGLCKEGMFDKAL 400

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
            +   M   G  P+A  + I+ +    + E +KAE+LL  MI  G 
Sbjct: 401 AMKSKMEDNGCIPNAVTFDIIIRSLFEKDENDKAEKLLHGMIAKGL 446



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 80/322 (24%), Positives = 166/322 (51%), Gaps = 3/322 (0%)

Query: 203 MSREGNVK---PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           +SR+  VK   PNL T N+L+  +C+   +  +++V+ K+   G +PD +T NT+     
Sbjct: 87  LSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLC 146

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
             GE  ++     ++   G Q N  + G +++G CK G+ + A++  R +++    P++V
Sbjct: 147 LKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPDVV 206

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           +++ +I G  +    +   +  + M    + P+VITYST++  +  AG +     + ++M
Sbjct: 207 MYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLLNEM 266

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
               I P+ + Y+IL     +E + ++A++LL  M   G   +VV + +++ G C   ++
Sbjct: 267 ILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLDGLCKSQNL 326

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           D+A  +F KM + G+ PN  T+  L+ G  +  +   A+++ Q +   G      T+ ++
Sbjct: 327 DKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHLLVKGCCIDVRTYNVM 386

Query: 500 AEARRATGLTKEAKRILSKIKN 521
                  G+  +A  + SK+++
Sbjct: 387 ISGLCKEGMFDKALAMKSKMED 408



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 141/293 (48%)

Query: 227 KNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           K+   A ++  +M   G++P++VT N +   +   G+   +  V+ ++   G QP+  T 
Sbjct: 79  KHYPTAISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITL 138

Query: 287 GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKE 346
             ++ G C +G++K +L F   +   G   N V +  L+ G  +I +     ++L ++++
Sbjct: 139 NTLMKGLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIED 198

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
               PDV+ YSTI++       +++  + F +M   GI P+   YS L  G+    +   
Sbjct: 199 RSTRPDVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMG 258

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  LL  MI    +PNV  +  +I   C +G +  A ++  +M   G   ++ T+ +++ 
Sbjct: 259 AFSLLNEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHKGQPADVVTYNSVLD 318

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           G  +++   +A  +   MK +G+ P K T+  L +     G  K A+++   +
Sbjct: 319 GLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQHL 371



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 112/221 (50%)

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A+  +R M+  G+ PNLV  N+LI  F  +        VL  + +    PD IT +T+M 
Sbjct: 84  AISLSRQMEVKGIEPNLVTLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMK 143

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
                G + +     D +   G + +  +Y  L  G  +  E   A +LL  + +    P
Sbjct: 144 GLCLKGEVKRSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRP 203

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +VV+++TII G C D  +++A + F +M   G+ PN+ T+ TL+WG+  A Q   A  +L
Sbjct: 204 DVVMYSTIIDGLCKDKIVNQAYDFFSEMNARGIFPNVITYSTLIWGFCLAGQLMGAFSLL 263

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             M    ++P   T+ +L +A    G  KEAK++L+++ +K
Sbjct: 264 NEMILKNINPNVYTYNILIDALCKEGKVKEAKKLLAEMHHK 304



 Score = 45.8 bits (107), Expect = 0.072,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 64/136 (47%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++ L +     +A A+F  + + G +P+  TYT L+  L    R  +   +  
Sbjct: 310 VVTYNSVLDGLCKSQNLDKATALFMKMKKWGIQPNKYTYTALIDGLCKGGRLKNAQKLFQ 369

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G   D   +N +I+   + G  ++A+    KM+++G  P   T++ +I+      
Sbjct: 370 HLLVKGCCIDVRTYNVMISGLCKEGMFDKALAMKSKMEDNGCIPNAVTFDIIIRSLFEKD 429

Query: 192 KPEESVKLLDLMSREG 207
           + +++ KLL  M  +G
Sbjct: 430 ENDKAEKLLHGMIAKG 445


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 216/454 (47%), Gaps = 4/454 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +    ++ L   G  ++A     +L       ++  Y  L+     + R +    ++
Sbjct: 224 TVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLL 283

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++++ G+ PD   ++ ++NAF   G++E  M+   +M+     P      +++ G    
Sbjct: 284 EEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTK 343

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   + +     +S +G  K +L +Y+ L+  +    N+  A N++H+M  +G+ PD + 
Sbjct: 344 GLVNDCLNFFHELSAKG-YKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYII 402

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y ++   Y + G   +A +    M  +G+QP+  TC  I+  YC  G+ +EAL +   MK
Sbjct: 403 YISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMK 462

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           +  + PN   ++++I    +    +   EVL +M +  + P VI Y+TIM+ ++   F +
Sbjct: 463 DQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQ-FKN 521

Query: 371 KCK--EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
             K  +++  M K G KPD    ++L   + +  +  KA  L   M E G   +   FT 
Sbjct: 522 PMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTA 581

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           II G+C  G++ RA  ++ KM  + V+PN+KT+  L+ G+ + ++   A  ++  MK   
Sbjct: 582 IIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNS 641

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           V P   T+  L    +       A  +  ++K K
Sbjct: 642 VTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKK 675



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 94/358 (26%), Positives = 165/358 (46%), Gaps = 37/358 (10%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T ++  L  +G   +    F+ L   G+K  L++Y+TL+          S ++++ ++ +
Sbjct: 334 TSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRK 393

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           NG+ PD I + ++I  +   G ++EA+  F+ M + GL P   T N ++  Y   G+ EE
Sbjct: 394 NGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEE 453

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM------------------- 236
           ++  ++ M ++ N+ PN  TY+V++   C  + + +AW V+                   
Sbjct: 454 ALIYINQM-KDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIM 512

Query: 237 -----------------HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
                             KM   G KPD VT   +   +++ G+  +A  +  EM   G+
Sbjct: 513 DGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGL 572

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
             +      II GYC+ G +K A    + MK   V PN+  +  L+ GF ++   D    
Sbjct: 573 SRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATM 632

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           ++  MK   V PDV TY+ ++  +     +D+  E+FD+M K G  PD  AY  L  G
Sbjct: 633 LIDDMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTLGLG 690



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 101/457 (22%), Positives = 212/457 (46%), Gaps = 9/457 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R+   ++ L+          +A+ +F    + G + ++ +   LL  L    +  ++ S+
Sbjct: 113 RSATVLSLLIKVFASNKMLADAKDVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSL 172

Query: 130 MSQVEENGMDPDSIFFNAVINAFS-----ESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
              ++ +G  P+   +  +IN +      ++ +ME+A     +M+E G  PT  TY   I
Sbjct: 173 FDDLKNSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYI 232

Query: 185 KGYGIAGKPEESV-KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
            G    G  E++  K+ DL  R  N   N+  YN L++ +C +    EA  ++ +M   G
Sbjct: 233 HGLCRVGSIEDAWNKIQDL--RSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEG 290

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           + PD+ +Y+ +  A+   G+ +    +I EMEH   +P    C  ++ G   +G + + L
Sbjct: 291 ISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCL 350

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
            F   +   G   +L+ ++ LI GF++  +    + ++  M++  + PD I Y +++  +
Sbjct: 351 NFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREY 410

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G + +  + F  M + G++PD    + +   Y    + E+A   +  M +    PN 
Sbjct: 411 CRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNS 470

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS-EARQPWRAEEILQ 482
             ++ II+  C   ++++A EV   M +  + P++  + T+M GY+ + + P +A ++ +
Sbjct: 471 YTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYR 530

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            M   G  P   T  +L +     G   +A  +  ++
Sbjct: 531 KMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEM 567


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 219/454 (48%), Gaps = 8/454 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R +  +++  +  G    A+ +F+ +++    P   +Y  ++       R + +   +  
Sbjct: 194 RILNFVIDVALALGFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKD 253

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + E G   D+     +I+ FSE G +  A   F K  + GL P    +++LI G    G 
Sbjct: 254 MIERGYAVDNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGS 313

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTY 251
            +++ ++L+ M R+G  KPN+ T+  L+   C +    +A+ +  K+  S   KP+V TY
Sbjct: 314 IKQAFEMLEEMVRKG-WKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTY 372

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +   Y +  + ++AE +++ M+  G+ PN  T   +I G+CK G    A      M +
Sbjct: 373 TCMINGYCKEEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGK 432

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK---EFRVNPDVITYSTIMNAWSTAGF 368
            G  PN+  +N +I G  +   +    E   L++   +  ++ D +TY+ +++ +     
Sbjct: 433 EGFTPNIFTYNAIIDGLCK---KGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTD 489

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
             +   IF  M K G++PD H Y++L   + R+++ E++E+L    +  G  P    +T+
Sbjct: 490 NKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTS 549

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G+C DG +  AI+ F KM ++G  P+  T+  L+ G     +   A ++ + M   G
Sbjct: 550 MICGYCRDGHISSAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNG 609

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           + P + T + LA      G +  A  IL +++ K
Sbjct: 610 LSPCEVTRVTLAYEYCKQGDSATAMIILERLEKK 643



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/269 (25%), Positives = 111/269 (41%), Gaps = 50/269 (18%)

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y   AT +  N   D+A EV+  M               +  + + GK+KEA+     M+
Sbjct: 141 YIVCATTFLNNDNLDRATEVMQCM---------------VRSFSEIGKLKEAVNMVIEMQ 185

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            +G+     I N +I            D  LAL                       GF+D
Sbjct: 186 NHGLVLKARILNFVI------------DVALAL-----------------------GFVD 210

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             +++FD+M    + PD+ +Y ++  GY R       +  L  MIE G+  +    T +I
Sbjct: 211 YAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMI 270

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
           S +   G ++RA   F K  + G++PNL  F +L+ G  +     +A E+L+ M   G  
Sbjct: 271 STFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWK 330

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKI 519
           P   T   L +     G T++A R+  K+
Sbjct: 331 PNVYTHTALIDGLCKKGWTEKAFRLFLKL 359



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 83/180 (46%), Gaps = 4/180 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +   + K +E++ +F   +  G  P+  TYT+++         +S      ++ + G
Sbjct: 515 LIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYG 574

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             PDSI + A+I+       ++EA   +  M ++GL+P   T  TL   Y   G    ++
Sbjct: 575 CKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAM 634

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L+ + +    K  +RT N L+R  C+EK +  A    HK+    +  D +T     TA
Sbjct: 635 IILERLEK----KLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTA 690


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 201/404 (49%), Gaps = 1/404 (0%)

Query: 93  AIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAF 152
           ++   + + G +P+++T T L+  L +Q        ++  +E+     D   +  +IN  
Sbjct: 133 SVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGL 192

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
            ++G+   A++   KM+E    P    Y+T++ G    G   E++ L   MS +G V+PN
Sbjct: 193 CKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKG-VRPN 251

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
           L TY  L++  CN     E  +++ +M   GM+ D+ T N +  A+ + G+  QA+ VI 
Sbjct: 252 LVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIG 311

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
            M   G  P+  T   +I  YC + K+ EA+R    M   G  P++V+F  LI G+ +  
Sbjct: 312 FMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDK 371

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           + + V  +L  M +    PDV+T++T++  +  AG     KE+F +M K G  P+    +
Sbjct: 372 NINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCA 431

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           ++  G  +     +A  L   M +S    N+VI++ ++ G CS G ++ A E+F  +   
Sbjct: 432 VILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGK 491

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           G+  N+ T+  ++ G  +     +AE++L  M+  G  P   T+
Sbjct: 492 GLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTY 535



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 178/344 (51%), Gaps = 1/344 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + +M+ L + G   EA  + + +   G +P+LVTY  L+  L    R+    S++ ++ +
Sbjct: 221 STIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIK 280

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            GM  D    N +++AF + G + +A      M  +G  P   TYN+LI  Y +  K  E
Sbjct: 281 MGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNE 340

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++++  LM   G + P++  +  L+  WC +KNI +  +++ +MA  G  PDVVT+ T+ 
Sbjct: 341 AMRVFHLMVSRGCL-PDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLI 399

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + Q G    A+E+ + M   G  PN +TC +I+ G CK   + EA+  A  M++  + 
Sbjct: 400 GGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLD 459

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            N+VI+++L+ G       +   E+ + +    +  +V TY+ ++      G +DK +++
Sbjct: 460 LNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDL 519

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
             +M + G  PD   Y++  +G + ++E  ++ + L  M + GF
Sbjct: 520 LINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGF 563



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 203/451 (45%), Gaps = 11/451 (2%)

Query: 79  MNSLIERGKPQ---EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           M +L + GK +   EA  +F  +      PS+  +T LL  +   K + +  S++  +  
Sbjct: 45  MRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFS 104

Query: 136 N-GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           + G++ D+I  N VIN       +         M + GL PT  T   LI G  + G   
Sbjct: 105 SLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVA 164

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++V L+D M +      ++ TY VL+   C   +   A   + KM     KP+VV Y+TI
Sbjct: 165 QAVGLVDHMEKM-RYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTI 223

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                ++G   +A  +  EM   GV+PN  T   +I G C  G+ KE       M + G+
Sbjct: 224 MDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGM 283

Query: 315 HPNLVIFNLLIKGFVE---IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             +L   N+L+  F +   +M    V   + L  E    PDV TY+++++ +     M++
Sbjct: 284 RLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGE---GPDVFTYNSLIHIYCLQNKMNE 340

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F  M   G  PD   ++ L  G+ +++   K   LL  M + GF P+VV +TT+I 
Sbjct: 341 AMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIG 400

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C  G    A E+F  M ++G  PNL+T   ++ G  +      A  + + M+   +  
Sbjct: 401 GFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDL 460

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
               + +L +   + G    A  + S +  K
Sbjct: 461 NIVIYSILLDGMCSAGKLNAAWELFSSLPGK 491



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 209/427 (48%), Gaps = 5/427 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI- 129
           TV ++T L+N L  +G   +A  + +++ +  +   + TY  L+  L   K  +++ ++ 
Sbjct: 146 TVMTLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLC--KTGDTLAAVE 203

Query: 130 -MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
            + ++EE    P+ + ++ +++   + G + EA++   +M   G+ P   TY  LI+G  
Sbjct: 204 WLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLC 263

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             G+ +E+  LLD M + G ++ +L+T N+LV A+C E  + +A +V+  M  +G  PDV
Sbjct: 264 NFGRWKETGSLLDEMIKMG-MRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDV 322

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TYN++   Y    + ++A  V   M   G  P+      +I G+CK+  I + +     
Sbjct: 323 FTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEE 382

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M + G  P++V +  LI GF +        E+   M ++   P++ T + I++       
Sbjct: 383 MAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNL 442

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           + +   + + M K+ +  +   YSIL  G     +   A EL  ++   G   NV  +T 
Sbjct: 443 LSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTI 502

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I G C  GS+D+A ++   M E+G  P+  T+   + G    ++  R+ + L IM+  G
Sbjct: 503 MIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKG 562

Query: 489 VHPQKST 495
                +T
Sbjct: 563 FSVDAAT 569



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/305 (24%), Positives = 148/305 (48%), Gaps = 1/305 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           ++++  L+++  + GK  +A+++   +I  G  P + TY +L+    +Q + N    +  
Sbjct: 287 LQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFH 346

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  PD + F ++I+ + +  N+ + M    +M + G  P   T+ TLI G+  AG
Sbjct: 347 LMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAG 406

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           +P  + +L   M + G V PNL+T  V++   C    ++EA ++   M  S +  ++V Y
Sbjct: 407 RPLAAKELFLNMHKYGQV-PNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIY 465

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +       G+ + A E+   +   G+Q N  T  I+I G CK+G + +A      M+E
Sbjct: 466 SILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEE 525

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P+   +N+ ++G +   +     + L +M++   + D  T    +N  ST     +
Sbjct: 526 NGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYLSTNEGDTR 585

Query: 372 CKEIF 376
            +E F
Sbjct: 586 IREFF 590


>gi|242035429|ref|XP_002465109.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
 gi|241918963|gb|EER92107.1| hypothetical protein SORBIDRAFT_01g032160 [Sorghum bicolor]
          Length = 1153

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 122/477 (25%), Positives = 213/477 (44%), Gaps = 37/477 (7%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +VR+ + LM S  ++        + N +   G KP++ +YT  +  L    RF+  + I+
Sbjct: 212 SVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQIL 271

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++E++G  PD +    VI    ++G + +A D FWKMK S   P   TY TL+   G +
Sbjct: 272 GKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDS 331

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +  +++ + M  +G    N+ +Y  +V A C    + EA  V  +M   G+ P+  +
Sbjct: 332 GDSQSVMEIWNAMVADG-YNDNIVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYS 390

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN++ + + +    D+A E+   M   G  PNG T  + I+ Y K G+  +A++    MK
Sbjct: 391 YNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMK 450

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G+ P++   N ++              V   +K+  V+PD ITY+ ++   S A   D
Sbjct: 451 SKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKAD 510

Query: 371 KCKEIFDDMGKAGIKPDAHA-----------------------------------YSILA 395
           +    F DM + G  PD  A                                   Y+ L 
Sbjct: 511 EAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLL 570

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G  RE + ++   LL  M  S   PN++ + T++     +G ++ AI +   M E G +
Sbjct: 571 SGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCT 630

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           P+L ++ T+M+G  +  +   A  +   MK   + P  +T   +  +    GL KEA
Sbjct: 631 PDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEA 686



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 115/490 (23%), Positives = 219/490 (44%), Gaps = 50/490 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   +++SL   G+   A+ +F  L + G  P  +TYT ++   +   + +   +  S
Sbjct: 458 VAAANAVLSSLARSGRLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFS 517

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + E G  PD +  N++I+   + G   EA   F ++KE  + PT  TYNTL+ G G  G
Sbjct: 518 DMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREG 577

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E + LL+ M+   +  PNL TYN ++        +  A  +++ M   G  PD+ +Y
Sbjct: 578 KVKEVMHLLEEMTHSIH-PPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSY 636

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+     +    ++A  +  +M+   + P+  T   I+  + K G +KEAL    T+KE
Sbjct: 637 NTVMYGLIKEERFEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEALH---TVKE 692

Query: 312 YGVHPNLVI----FNLLIKGFVEIMDRDGVDEVL----------ALMKEFRVNPDVI--- 354
           Y +  +       F+ L++G   I+++ GV++ +           L+ +F + P +    
Sbjct: 693 YILKADCNTDKSSFHSLMEG---ILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLC 749

Query: 355 -------------------------TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
                                    +Y++++        +D  +++F +M + G  PD  
Sbjct: 750 KHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEF 809

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+++     +    E+   +   M   G+    V + TIISG      +++AI+++  +
Sbjct: 810 TYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNL 869

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G SP   T+  L+ G  +A +   AE +   M  +G  P  + + +L    R  G T
Sbjct: 870 MSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRIAGNT 929

Query: 510 KEAKRILSKI 519
           +   +I  K+
Sbjct: 930 ENVCQIFEKM 939



 Score =  148 bits (374), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 109/484 (22%), Positives = 213/484 (44%), Gaps = 18/484 (3%)

Query: 39  PGEKKQLYSNS--KPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFN 96
           P E  +L++ +  +PT       C++            M +LM +    G+  +   +F+
Sbjct: 88  PAEALELFTAAARQPTAVHTTESCNY------------MLELMRA---HGRVGDMAQVFD 132

Query: 97  NLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESG 156
            + +   K ++ T+ T+ + + +Q    S    +  + E GM  +   +N +I    +SG
Sbjct: 133 LMQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSG 192

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
              EAM+ +  M E G++P+  TY+ L+  +G     +  + LL+ M   G VKPN+ +Y
Sbjct: 193 FDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARG-VKPNVYSY 251

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
            + +R         EA+ ++ KM  SG KPDVVT+  +       G    A++V  +M+ 
Sbjct: 252 TICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKA 311

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
           +  +P+  T   ++      G  +  +     M   G + N+V +  ++    ++   D 
Sbjct: 312 SDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDE 371

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
              V   MKE  ++P+  +Y+++++ +  A   D+  E+F+ M   G  P+ + + +   
Sbjct: 372 ALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFIN 431

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
            Y +  +  KA +    M   G  P+V     ++S     G +  A  VF ++ + GVSP
Sbjct: 432 YYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSGRLGMAKRVFYELKDMGVSP 491

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +  T+  ++   S+A +   A      M   G  P       L +     G   EA ++ 
Sbjct: 492 DTITYTMMIKCCSKASKADEAMNFFSDMVETGCVPDVLALNSLIDTLYKGGKGNEAWKLF 551

Query: 517 SKIK 520
            ++K
Sbjct: 552 HQLK 555



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 115/482 (23%), Positives = 205/482 (42%), Gaps = 44/482 (9%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L++ L   GK +E   +   +    H P+L+TY T+L  L+     N    ++  + E G
Sbjct: 569  LLSGLGREGKVKEVMHLLEEMTHSIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKG 628

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY---------- 187
              PD   +N V+    +    EEA   F +MK+  L P  +T  T++  +          
Sbjct: 629  CTPDLSSYNTVMYGLIKEERFEEAFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEAL 687

Query: 188  ------------------------GIAGKP--EESVKLLDLMSREGNVKPNLRTYNVLVR 221
                                    GI  K   E+S++  + ++  G +  N      L+R
Sbjct: 688  HTVKEYILKADCNTDKSSFHSLMEGILNKAGVEKSIEFAENIASRG-ILLNDFFLCPLIR 746

Query: 222  AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
              C  K   EA  + +K    G+     +YN++          D AE++  EM+  G  P
Sbjct: 747  HLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGP 806

Query: 282  NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD-GVDEV 340
            +  T  +I+    K  +I+E LR    M   G     V +N +I G V+    +  +D  
Sbjct: 807  DEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYNTIISGLVKSKRLEQAIDLY 866

Query: 341  LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
              LM E   +P   TY  +++    AG M   + +F++M + G KP+   Y+IL  G+  
Sbjct: 867  YNLMSE-GFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEYGCKPNCTIYNILLNGHRI 925

Query: 401  EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
                E   ++   M+E G +P++  +T +I   C+ G ++  +  F ++ E G+ P+L  
Sbjct: 926  AGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLII 985

Query: 461  FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF----LLLAEARRATGLTKEAKRIL 516
            +  L+ G  ++ +   A  +   MK  G+ P   T+    L L +A +A+   +  + +L
Sbjct: 986  YNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELL 1045

Query: 517  SK 518
             K
Sbjct: 1046 IK 1047



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 91/337 (27%), Positives = 159/337 (47%), Gaps = 1/337 (0%)

Query: 133  VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
            +   G+  +  F   +I    +     EA   F K K  G++  T +YN+LI+G      
Sbjct: 729  IASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVSLKTGSYNSLIRGLVDENL 788

Query: 193  PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
             + +  L   M R G   P+  TYN+++ A      I E   V  +M   G +   VTYN
Sbjct: 789  IDIAEDLFTEMKRLG-CGPDEFTYNLILDAMGKSMRIEEMLRVQAEMHRKGYESTYVTYN 847

Query: 253  TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            TI +   ++   +QA ++   +   G  P   T G ++ G  K GK+ +A      M EY
Sbjct: 848  TIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKMVDAENLFNEMLEY 907

Query: 313  GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
            G  PN  I+N+L+ G     + + V ++   M E  +NPD+ +Y+ +++   TAG ++  
Sbjct: 908  GCKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTVLIDTLCTAGRLNDG 967

Query: 373  KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
               F  + + G++PD   Y++L  G  + +  E+A  L   M + G  PN+  + ++I  
Sbjct: 968  LSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILH 1027

Query: 433  WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
                G    A ++++++   G  PN+ T+  L+ GYS
Sbjct: 1028 LGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYS 1064



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 110/487 (22%), Positives = 212/487 (43%), Gaps = 38/487 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN------- 124
           + S T ++++L + G+  EA A+F+ + E G  P   +Y +L++       F+       
Sbjct: 353 IVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFN 412

Query: 125 --------------------------SIHSIM--SQVEENGMDPDSIFFNAVINAFSESG 156
                                     S+ +I     ++  G+ PD    NAV+++ + SG
Sbjct: 413 HMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSG 472

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            +  A   F+++K+ G++P T TY  +IK    A K +E++     M   G V P++   
Sbjct: 473 RLGMAKRVFYELKDMGVSPDTITYTMMIKCCSKASKADEAMNFFSDMVETGCV-PDVLAL 531

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N L+          EAW + H++    ++P   TYNT+ +   + G+  +   ++ EM H
Sbjct: 532 NSLIDTLYKGGKGNEAWKLFHQLKEMKIEPTNGTYNTLLSGLGREGKVKEVMHLLEEMTH 591

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
           +   PN  T   ++    K G++  A+    +M E G  P+L  +N ++ G ++    + 
Sbjct: 592 SIHPPNLITYNTVLDCLSKNGEVNCAIGMLYSMTEKGCTPDLSSYNTVMYGLIKEERFEE 651

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM-DKCKEIFDDMGKAGIKPDAHAYSILA 395
              +   MK+  + PD  T  TI+ ++   G M +    + + + KA    D  ++  L 
Sbjct: 652 AFRMFCQMKKI-LAPDYATLCTILPSFVKNGLMKEALHTVKEYILKADCNTDKSSFHSLM 710

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
           +G + +   EK+ E    +   G   N      +I   C       A ++F+K    GVS
Sbjct: 711 EGILNKAGVEKSIEFAENIASRGILLNDFFLCPLIRHLCKHKKALEAHQLFNKFKGLGVS 770

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
               ++ +L+ G  +      AE++   MK  G  P + T+ L+ +A   +   +E  R+
Sbjct: 771 LKTGSYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRV 830

Query: 516 LSKIKNK 522
            +++  K
Sbjct: 831 QAEMHRK 837



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 184/396 (46%), Gaps = 3/396 (0%)

Query: 147 AVINAFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           +V++    +    EA++ F    ++     TT + N +++     G+  +  ++ DLM +
Sbjct: 77  SVVHMLRSAPGPAEALELFTAAARQPTAVHTTESCNYMLELMRAHGRVGDMAQVFDLMQK 136

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +  VK N+ T+  +      +  +  A   +  M  +GM  +  TYN +     ++G   
Sbjct: 137 Q-IVKANVGTFATVFSGVGVQGGLRSAPVALPVMREAGMSLNGYTYNGLIYFLVKSGFDA 195

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A EV   M  +G+ P+ RT  +++  + K+  +   L     M+  GV PN+  + + I
Sbjct: 196 EAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTVLWLLNEMEARGVKPNVYSYTICI 255

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           +   +    D   ++L  M++    PDV+T++ ++     AG +   K++F  M  +  K
Sbjct: 256 RVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQVLCDAGRLSDAKDVFWKMKASDQK 315

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD   Y  L        + +   E+   M+  G++ N+V +T ++   C  G +D A+ V
Sbjct: 316 PDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDNIVSYTAVVDALCQVGRLDEALAV 375

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
           FD+M E G+SP   ++ +L+ G+ +A    RA E+   M A G  P   T +L       
Sbjct: 376 FDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFNHMNACGPSPNGYTHVLFINYYGK 435

Query: 506 TGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLER 541
           +G + +A +    +K+K    ++ A   + + SL R
Sbjct: 436 SGQSLKAIQRYEHMKSKGIVPDVAAANAV-LSSLAR 470



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/381 (22%), Positives = 161/381 (42%), Gaps = 12/381 (3%)

Query: 74   SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
            S   L+  L++      A+ +F  +   G  P   TY  +L A+    R   +  + +++
Sbjct: 775  SYNSLIRGLVDENLIDIAEDLFTEMKRLGCGPDEFTYNLILDAMGKSMRIEEMLRVQAEM 834

Query: 134  EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
               G +   + +N +I+   +S  +E+A+D ++ +   G +PT  TY  L+ G   AGK 
Sbjct: 835  HRKGYESTYVTYNTIISGLVKSKRLEQAIDLYYNLMSEGFSPTPCTYGPLLDGLLKAGKM 894

Query: 194  EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             ++  L + M   G  KPN   YN+L+       N      +  KM   G+ PD+ +Y  
Sbjct: 895  VDAENLFNEMLEYG-CKPNCTIYNILLNGHRIAGNTENVCQIFEKMVEQGINPDIKSYTV 953

Query: 254  IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
            +       G  +       ++   G++P+     ++I G  K  +I+EA+     MK+ G
Sbjct: 954  LIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFNEMKKKG 1013

Query: 314  VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMD 370
            + PNL  +N LI   + +       E   + +E  +    P+V TY+ ++  +S +G  D
Sbjct: 1014 IVPNLYTYNSLI---LHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSGSTD 1070

Query: 371  KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
                 +D      +       + L  G V E     AE L   M   G  P+   +  I+
Sbjct: 1071 NAYAAYD-----CVAVGVSLKTALISGLVDENLINIAEGLFAEMKRRGCGPDQFTYNLIL 1125

Query: 431  SGWCSDGSMDRAIEVFDKMCE 451
                    ++  ++V +++ E
Sbjct: 1126 DAIGKSMRIEEMLKVQEEIAE 1146



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/374 (24%), Positives = 165/374 (44%), Gaps = 4/374 (1%)

Query: 148 VINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
           ++ A    G+M +  D    M++  +     T+ T+  G G+ G    +   L +M RE 
Sbjct: 117 LMRAHGRVGDMAQVFDL---MQKQIVKANVGTFATVFSGVGVQGGLRSAPVALPVM-REA 172

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
            +  N  TYN L+          EA  V   M   G+ P V TY+ +  ++ +  + D  
Sbjct: 173 GMSLNGYTYNGLIYFLVKSGFDAEAMEVYKAMVEDGISPSVRTYSVLMVSFGKKRDVDTV 232

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
             ++ EME  GV+PN  +  I I    +  +  EA +    M++ G  P++V   ++I+ 
Sbjct: 233 LWLLNEMEARGVKPNVYSYTICIRVLGQAARFDEAYQILGKMEDSGCKPDVVTHTVVIQV 292

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             +        +V   MK     PD +TY T+++    +G      EI++ M   G   +
Sbjct: 293 LCDAGRLSDAKDVFWKMKASDQKPDRVTYITLLDKCGDSGDSQSVMEIWNAMVADGYNDN 352

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
             +Y+ +     +    ++A  +   M E G  P    + ++ISG+      DRA+E+F+
Sbjct: 353 IVSYTAVVDALCQVGRLDEALAVFDEMKEKGISPEQYSYNSLISGFLKADMFDRALELFN 412

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
            M   G SPN  T    +  Y ++ Q  +A +  + MK+ G+ P  +    +  +   +G
Sbjct: 413 HMNACGPSPNGYTHVLFINYYGKSGQSLKAIQRYEHMKSKGIVPDVAAANAVLSSLARSG 472

Query: 508 LTKEAKRILSKIKN 521
               AKR+  ++K+
Sbjct: 473 RLGMAKRVFYELKD 486



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 99/200 (49%), Gaps = 9/200 (4%)

Query: 72   VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
            ++S T L+++L   G+  +  + F  L+E G +P L+ Y  L+  L   +R      + +
Sbjct: 948  IKSYTVLIDTLCTAGRLNDGLSYFRQLLELGLEPDLIIYNLLIDGLGKSERIEEAVCLFN 1007

Query: 132  QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++++ G+ P+   +N++I    ++G   EA   + ++   G  P   TYN LI+GY ++G
Sbjct: 1008 EMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKGWKPNVFTYNALIRGYSVSG 1067

Query: 192  KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              + +    D ++    V  +L+T   L+    +E  I  A  +  +M   G  PD  TY
Sbjct: 1068 STDNAYAAYDCVA----VGVSLKT--ALISGLVDENLINIAEGLFAEMKRRGCGPDQFTY 1121

Query: 252  NTIATAYAQNGEADQAEEVI 271
            N I  A    G++ + EE++
Sbjct: 1122 NLILDAI---GKSMRIEEML 1138



 Score = 43.1 bits (100), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 35/161 (21%), Positives = 68/161 (42%), Gaps = 30/161 (18%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L++ L +  + +EA  +FN + + G  P+L TY +L+  L    + +    +  ++   G
Sbjct: 989  LIDGLGKSERIEEAVCLFNEMKKKGIVPNLYTYNSLILHLGKAGKASEAAQMYEELLIKG 1048

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDT------------------------------FWK 167
              P+   +NA+I  +S SG+ + A                                 F +
Sbjct: 1049 WKPNVFTYNALIRGYSVSGSTDNAYAAYDCVAVGVSLKTALISGLVDENLINIAEGLFAE 1108

Query: 168  MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGN 208
            MK  G  P   TYN ++   G + + EE +K+ + ++ + N
Sbjct: 1109 MKRRGCGPDQFTYNLILDAIGKSMRIEEMLKVQEEIAEDLN 1149


>gi|357122161|ref|XP_003562784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g02860-like [Brachypodium distachyon]
          Length = 791

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 215/445 (48%), Gaps = 5/445 (1%)

Query: 80  NSLI----ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           N+LI     R   +EA  +F+ +   G +P  VT  +LL      +R++    ++ ++E+
Sbjct: 251 NTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYDEAIGVLKEMEQ 310

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P  + +N++I+++ + G +EEA     +M+  G+ P   TY TL+ G   AGK + 
Sbjct: 311 GGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDA 370

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++   + M R G  KPNL TYN L++         E   V  ++ ++G  PDVVT+NT+ 
Sbjct: 371 AIGTYNEMLRNG-CKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLL 429

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + QNG   +   V  EM+ +G  P   T   +IS Y + G   +A+   + M E G+H
Sbjct: 430 AVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIH 489

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P++  +N ++         +  +++ A M+     PD ++YS++++A++ A  +DK K +
Sbjct: 490 PDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSL 549

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            +D+    I+        L     +       E+  + +       ++ +   +IS +  
Sbjct: 550 SEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGK 609

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           +G + +  E+   M E  ++ +  T+ +LM  YS      + E IL  +K+    P + +
Sbjct: 610 NGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYS 669

Query: 496 FLLLAEARRATGLTKEAKRILSKIK 520
           +  +  A    G  KEA R+ S++K
Sbjct: 670 YNTMIYAYGRKGQMKEASRLFSEMK 694



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 205/433 (47%), Gaps = 36/433 (8%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V +   L++S ++ G  +EA  +   +   G +P ++TYTTL++ L    + ++     
Sbjct: 316 SVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTLVSGLDRAGKIDAAIGTY 375

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           +++  NG  P+   +NA+I      G   E M  F +++ +G  P   T+NTL+  +G  
Sbjct: 376 NEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGFVPDVVTWNTLLAVFGQN 435

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E   +   M + G V P   TY  L+ ++       +A  +  +M  +G+ PD+ T
Sbjct: 436 GLDTEVSGVFKEMKKSGYV-PERDTYVSLISSYSRCGLFDQAMEIYKRMIEAGIHPDIST 494

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI------KEALR 304
           YN + +A A+ G  +QAE++  EME+   +P+  +   ++  Y    K+       E + 
Sbjct: 495 YNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSEDIY 554

Query: 305 FARTMKEYGVHPNLVIFNLLI-------KGFVEIMDR----------------------D 335
             R     G+   LV+ N  +       K F+E+  R                       
Sbjct: 555 AERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNGMVK 614

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
            V+E+L+LMKE  +N    TY+++M+ +S  G  +KC+ I  ++  +  +PD ++Y+ + 
Sbjct: 615 KVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMI 674

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
             Y R+ + ++A  L   M  SG  P++V +   +  + ++   + AI++   M  HG  
Sbjct: 675 YAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCK 734

Query: 456 PNLKTFETLMWGY 468
           PN +T+ T++  Y
Sbjct: 735 PNERTYNTILQEY 747



 Score =  159 bits (402), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 97/369 (26%), Positives = 182/369 (49%), Gaps = 10/369 (2%)

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP-EESV 197
           DPD+  + A+I+A S +    +A+  F +M  +G+ P   TYN ++  Y     P +E +
Sbjct: 173 DPDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVL 232

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L+D M ++G +  +  TYN L+          EA  V  +M A+G +PD VT N++   
Sbjct: 233 ALVDSMRKDG-IPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDV 291

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y +    D+A  V+ EME  G  P+  T   +IS Y K+G ++EA +    M+  G+ P+
Sbjct: 292 YGKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPD 351

Query: 318 LVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCK 373
           ++ +  L+ G    +DR G +D  +    E   N   P++ TY+ ++      G   +  
Sbjct: 352 VITYTTLVSG----LDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMM 407

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            +FD++  AG  PD   ++ L   + +     +   +   M +SG+ P    + ++IS +
Sbjct: 408 IVFDEIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSY 467

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G  D+A+E++ +M E G+ P++ T+  ++   +   +  +AE++   M+     P +
Sbjct: 468 SRCGLFDQAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDE 527

Query: 494 STFLLLAEA 502
            ++  L  A
Sbjct: 528 LSYSSLLHA 536



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 116/486 (23%), Positives = 228/486 (46%), Gaps = 45/486 (9%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQKRFNSIHSIMSQVE 134
           T L+++L    + ++A A+F  ++  G  P+LVTY  +L   + I   +  + +++  + 
Sbjct: 180 TALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLALVDSMR 239

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
           ++G+  D   +N +I+        +EA   F +M+ +G  P   T N+L+  YG A + +
Sbjct: 240 KDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYGKARRYD 299

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           E++ +L  M  +G   P++ TYN L+ ++  +  + EA  +  +M   G++PDV+TY T+
Sbjct: 300 EAIGVLKEME-QGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVITYTTL 358

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
            +   + G+ D A     EM  NG +PN  T   +I  +   GK  E +     ++  G 
Sbjct: 359 VSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEIRSAGF 418

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVD-EVLALMKEFRVN---PDVITYSTIMNAWSTAGFMD 370
            P++V +N L+  F     ++G+D EV  + KE + +   P+  TY ++++++S  G  D
Sbjct: 419 VPDVVTWNTLLAVF----GQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLFD 474

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  EI+  M +AGI PD   Y+ +     R    E+AE+L   M      P+ + +++++
Sbjct: 475 QAMEIYKRMIEAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLL 534

Query: 431 SGWCSDGSMDRA-----------IE------------------------VFDKMCEHGVS 455
             + +   +D+            IE                         F ++     S
Sbjct: 535 HAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCS 594

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
            ++     ++  Y +     + EEIL +MK   ++   +T+  L       G  ++ + I
Sbjct: 595 LDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENI 654

Query: 516 LSKIKN 521
           L++IK+
Sbjct: 655 LTEIKS 660



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/403 (25%), Positives = 187/403 (46%), Gaps = 36/403 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++ L   GK   A   +N ++  G KP+L TY  L+    ++ +F  +  +  
Sbjct: 352 VITYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFD 411

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G  PD + +N ++  F ++G   E    F +MK+SG  P   TY +LI  Y   G
Sbjct: 412 EIRSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCG 471

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++++++   M  E  + P++ TYN ++ A        +A  +  +M     +PD ++Y
Sbjct: 472 LFDQAMEIYKRMI-EAGIHPDISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSY 530

Query: 252 NTIATAYAQNGEADQ----AEEVIVEM--EHNGV----------------------QPNG 283
           +++  AYA   + D+    +E++  E    HNG+                      +   
Sbjct: 531 SSLLHAYANAKKLDKMKSLSEDIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRR 590

Query: 284 RTCGI-------IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
           R C +       +IS Y K G +K+       MKE  ++ +   +N L+  +  + D + 
Sbjct: 591 RRCSLDINVLNAMISIYGKNGMVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEK 650

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            + +L  +K  R  PD  +Y+T++ A+   G M +   +F +M  +G+ PD   Y+I  K
Sbjct: 651 CENILTEIKSSRARPDRYSYNTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVK 710

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            YV     E+A +L+  M+  G  PN   + TI+  +CS G +
Sbjct: 711 SYVANSMFEEAIDLVRYMVTHGCKPNERTYNTILQEYCSHGRI 753



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 72/310 (23%), Positives = 141/310 (45%), Gaps = 1/310 (0%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA-DQAEE 269
           P+   Y  L+ A        +A  V  +M A+G+ P +VTYN +   Y++      +   
Sbjct: 174 PDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVLA 233

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           ++  M  +G+  +  T   +IS   +    KEA +    M+  G  P+ V  N L+  + 
Sbjct: 234 LVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVYG 293

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           +    D    VL  M++    P V+TY+++++++   G +++  ++ ++M   GI+PD  
Sbjct: 294 KARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQLKEEMEVKGIEPDVI 353

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+ L  G  R  + + A      M+ +G  PN+  +  +I      G     + VFD++
Sbjct: 354 TYTTLVSGLDRAGKIDAAIGTYNEMLRNGCKPNLCTYNALIKLHGVRGKFPEMMIVFDEI 413

Query: 450 CEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
              G  P++ T+ TL+  + +         + + MK  G  P++ T++ L  +    GL 
Sbjct: 414 RSAGFVPDVVTWNTLLAVFGQNGLDTEVSGVFKEMKKSGYVPERDTYVSLISSYSRCGLF 473

Query: 510 KEAKRILSKI 519
            +A  I  ++
Sbjct: 474 DQAMEIYKRM 483



 Score =  100 bits (249), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 65/282 (23%), Positives = 133/282 (47%), Gaps = 38/282 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   ++++L   G+ ++A+ +F  +     +P  ++Y++LL A    K+ + + S+  
Sbjct: 492 ISTYNAVLSALARGGRWEQAEKLFAEMENLDSRPDELSYSSLLHAYANAKKLDKMKSLSE 551

Query: 132 QV------EENGM---------------DPDSIFF--------------NAVINAFSESG 156
            +        NG+               D +  F               NA+I+ + ++G
Sbjct: 552 DIYAERIESHNGLVKTLVLVNSKVNNLSDTEKAFLELRRRRCSLDINVLNAMISIYGKNG 611

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
            +++  +    MKES +  +T+TYN+L+  Y   G  E+   +L  + +    +P+  +Y
Sbjct: 612 MVKKVEEILSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEI-KSSRARPDRYSY 670

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N ++ A+  +  + EA  +  +M  SG+ PD+VTYN    +Y  N   ++A +++  M  
Sbjct: 671 NTMIYAYGRKGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVT 730

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
           +G +PN RT   I+  YC  G+I +   F   + E  +HP +
Sbjct: 731 HGCKPNERTYNTILQEYCSHGRIADGKSFISNLPE--LHPGI 770



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 92/214 (42%), Gaps = 12/214 (5%)

Query: 350 NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP-EKAE 408
           +PD   Y+ +++A S A        +F  M   G+ P    Y+++   Y +   P ++  
Sbjct: 173 DPDASAYTALISALSRASRFRDAVAVFRRMVANGVCPALVTYNVVLHVYSKIAVPWKEVL 232

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGY 468
            L+ +M + G   +   + T+IS          A +VFD+M   G  P+  T  +L+  Y
Sbjct: 233 ALVDSMRKDGIPLDRYTYNTLISCCRRRALYKEAAKVFDEMRAAGFEPDKVTLNSLLDVY 292

Query: 469 SEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEM 528
            +AR+   A  +L+ M+  G  P   T+  L  +    GL +EA ++      KE     
Sbjct: 293 GKARRYDEAIGVLKEMEQGGCPPSVVTYNSLISSYVKDGLLEEATQL------KEEMEVK 346

Query: 529 EAEEDIP-----VESLERLYHKEATTASYPNLLQ 557
             E D+      V  L+R    +A   +Y  +L+
Sbjct: 347 GIEPDVITYTTLVSGLDRAGKIDAAIGTYNEMLR 380



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 30/133 (22%), Positives = 61/133 (45%), Gaps = 2/133 (1%)

Query: 62  FCMNKESCRTVRSMT--KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
             + KES   + + T   LM+     G  ++ + I   +     +P   +Y T++ A   
Sbjct: 620 LSLMKESSINLSTATYNSLMHMYSRLGDCEKCENILTEIKSSRARPDRYSYNTMIYAYGR 679

Query: 120 QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTST 179
           + +      + S+++ +G+ PD + +N  + ++  +   EEA+D    M   G  P   T
Sbjct: 680 KGQMKEASRLFSEMKCSGLVPDIVTYNIFVKSYVANSMFEEAIDLVRYMVTHGCKPNERT 739

Query: 180 YNTLIKGYGIAGK 192
           YNT+++ Y   G+
Sbjct: 740 YNTILQEYCSHGR 752


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 180/372 (48%)

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNME 159
           + G +  + TY  L+  L  +K ++  ++I  ++ + G+ P++  FN +I +F+ +   +
Sbjct: 112 QAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRAD 171

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
           +A+  F  MK     P   T+  L+     AG  E++ ++   M   G V P+   +  +
Sbjct: 172 DAVTCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAM 231

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           VR     K + EA  V  +M   G  PD + YNT+    A+ G A +A +V+  M     
Sbjct: 232 VRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKAC 291

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            P   T GI+++  CK G ++ A    R M   G  PN VI+  LI GF +         
Sbjct: 292 VPTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACS 351

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +   M E    PDVIT++ +++    +G  ++  + F++M + G KP+   Y+ + +G  
Sbjct: 352 LFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLS 411

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +      A  ++  MI  G  P+ V +  ++ G+C  G +D A ++ D++ +   SPNL+
Sbjct: 412 KIGRVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQ 471

Query: 460 TFETLMWGYSEA 471
            + +L+ G  + 
Sbjct: 472 LYSSLVKGLCDG 483



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/518 (23%), Positives = 222/518 (42%), Gaps = 79/518 (15%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L + G  QEA  + +N++     P+ VTY  L+ +L           +   +  +G
Sbjct: 266 MIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMAASG 325

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+S+ + ++I+ F++SG M+EA   F +M E+G  P   T+  +I G   +G  E++ 
Sbjct: 326 FRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAA 385

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K  + M R G  KPN+ TY  +++       +  A+ +M  M A G  PD VTY  +   
Sbjct: 386 KSFEEMMR-GGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLLDG 444

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPN----------------------------------- 282
           + + G  D+A +++ E++     PN                                   
Sbjct: 445 FCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAENL 504

Query: 283 --GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
             G  C II+ G CK G++ EA R  + M   G  P+   +N+LI G     + + V+  
Sbjct: 505 DPGLCCSIIV-GLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRE-NRVERA 562

Query: 341 LALMKEFRV--------------------------------------NPDVITYSTIMNA 362
            AL+ +  +                                      N DV+ Y+ +   
Sbjct: 563 FALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVAYTALCTG 622

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
               G +D+   +F +M + G  PDA AY  +  G ++ ++ E A +    MI  G  P 
Sbjct: 623 LCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFDEMIGKGQKPT 682

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHG-VSPNLKTFETLMWGYSEARQPWRAEEIL 481
           V  +T ++   C  G++D A   F+ M   G +  ++  ++ L+ G+ +A +   A ++ 
Sbjct: 683 VATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKALKVDAALKLF 742

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           + M + G  P   T   L +    +G T++A+ +L ++
Sbjct: 743 EDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEM 780



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/480 (24%), Positives = 212/480 (44%), Gaps = 41/480 (8%)

Query: 60  CSFCMNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAAL 117
           C   M ++ C+  + +   L++ L + G  ++A  +F+ ++  G   P    +T ++  L
Sbjct: 176 CFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTL 235

Query: 118 TIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT 177
              KR      +  Q+E+ G  PD+I +N +I+  +++G+ +EA+     M      PT 
Sbjct: 236 LKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTE 295

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
            TY  L+     AG  E + +L  +M+  G  +PN   Y  L+  +     + EA ++  
Sbjct: 296 VTYGILVNSLCKAGTLERAEELFRVMAASG-FRPNSVIYTSLIHGFAKSGRMKEACSLFD 354

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           +M  +G +PDV+T+  +     ++G  +QA +   EM   G +PN  T   II G  K G
Sbjct: 355 EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG 414

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
           ++  A R  + M  +G  P+ V +  L+ GF ++   D   ++L  + +   +P++  YS
Sbjct: 415 RVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYS 474

Query: 358 TIMNAWSTAGF------------------------------------MDKCKEIFDDMGK 381
           +++      G                                     +D+   IF  M  
Sbjct: 475 SLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVS 534

Query: 382 AGIKPDAHAYSILAKGYVREQE--PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            G KPDA  Y+IL  G  R +E   E+A  LL  +   G+ P+ V +T +  G C  G +
Sbjct: 535 EGCKPDATTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEV 594

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           DRA+++ ++    G + ++  +  L  G     Q  RA  + Q M   G  P  + +  +
Sbjct: 595 DRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCI 654



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 181/387 (46%), Gaps = 37/387 (9%)

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+ G   D   +N ++N      N  +      +M ++G+ P T ++N LI+ +    + 
Sbjct: 111 EQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRA 170

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-MKPDVVTYN 252
           +++V   ++M R+   KP+L T+ +LV   C      +A+ V H+M A G + PD   + 
Sbjct: 171 DDAVTCFEIMKRK-RCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHT 229

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +     +     +A EV  +ME  G  P+      +I G  K G  +EAL+        
Sbjct: 230 AMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALK-------- 281

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
                 V+ N+L K  V                     P  +TY  ++N+   AG +++ 
Sbjct: 282 ------VLDNMLAKACV---------------------PTEVTYGILVNSLCKAGTLERA 314

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           +E+F  M  +G +P++  Y+ L  G+ +    ++A  L   M+E+G+ P+V+  T +I G
Sbjct: 315 EELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDG 374

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G+ ++A + F++M   G  PN+ T+ T++ G S+  +   A  I++ M A G  P 
Sbjct: 375 LCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPD 434

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKI 519
             T++ L +     G   EA ++L ++
Sbjct: 435 SVTYICLLDGFCKLGRLDEAAQLLDEL 461



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 103/435 (23%), Positives = 183/435 (42%), Gaps = 75/435 (17%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +++ L + G  ++A   F  ++ GG KP++VTYTT++  L+   R  +   IM 
Sbjct: 365 VITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMK 424

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY---- 187
            +  +G  PDS+ +  +++ F + G ++EA     ++ +   +P    Y++L+KG     
Sbjct: 425 GMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGG 484

Query: 188 ------------------------------GIA--GKPEESVKLLDLMSREGNVKPNLRT 215
                                         G+   G+ +E+ ++   M  EG  KP+  T
Sbjct: 485 SVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEG-CKPDATT 543

Query: 216 YNVLVRAWCN--EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
           YN+L+   C   E  +  A+ ++H +   G  PD VTY  +     + GE D+A +++ E
Sbjct: 544 YNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEE 603

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
               G   +      + +G C +G++  A+   + M   G  P+   +  +I G ++   
Sbjct: 604 ASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKK 663

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK---------------------- 371
            +   +    M      P V TY+ ++ A   AG +D+                      
Sbjct: 664 LEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYD 723

Query: 372 ------CK--------EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
                 CK        ++F+DM   G  P A   + L  G VR  + EKA+ELL  M   
Sbjct: 724 ALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMAAG 783

Query: 418 GFHPNVVIFTTIISG 432
           G  P+   FT I+ G
Sbjct: 784 GSPPHAATFTAILDG 798



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/206 (24%), Positives = 92/206 (44%), Gaps = 8/206 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L   L  +G+   A ++F  ++  G  P    Y  ++  L   K+         
Sbjct: 613 VVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFD 672

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIA 190
           ++   G  P    + A++ A   +GN++EA   F  M   G L  +   Y+ LI G+  A
Sbjct: 673 EMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMIYDALIHGFCKA 732

Query: 191 GKPEESVKLLDLMSREGNVKPNLRT---YNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
            K + ++KL + M   GNV   + +   ++ LVR+   EK    A  ++ +MAA G  P 
Sbjct: 733 LKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEK----AQELLQEMAAGGSPPH 788

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVE 273
             T+  I     ++ E+ +  +++ E
Sbjct: 789 AATFTAILDGLRKSDESGKLLKLVQE 814


>gi|414887034|tpg|DAA63048.1| TPA: crs2 associated factor1 [Zea mays]
          Length = 617

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/380 (26%), Positives = 190/380 (50%), Gaps = 3/380 (0%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS---IHSIMSQVEENGMDPDSIFFNAVIN 150
           + + L E    P L +Y+ LLA+L   +       +  ++  + E+ ++PD+  F+ +I+
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLIS 236

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           AF+ +   + A++     +  GLTP ++    LI   G AG+  E+  L       G +K
Sbjct: 237 AFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEIK 296

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P  R YN L++ +    ++  A  V+ +M+  G+ PD  TY+ +  AY + G  + A  +
Sbjct: 297 PRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARIL 356

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
           + EME +GV+P+      I++G+   G  ++A    R M+  GV P+   +N++I  F +
Sbjct: 357 LKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFGK 416

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
                   +    M+E  + PDV+T++T+++A    G  D+  E+F++M ++   P    
Sbjct: 417 YNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTTT 476

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+I+      ++  E  E +L  M E G  PN++ +TT++  +   G    AI+  + M 
Sbjct: 477 YNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAMK 536

Query: 451 EHGVSPNLKTFETLMWGYSE 470
             G+ P+   +  L+  Y++
Sbjct: 537 ADGLKPSPTMYHALVNAYAQ 556



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/336 (24%), Positives = 153/336 (45%), Gaps = 17/336 (5%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           F +  E     R+   L+   +     + A+ + + + + G  P   TY+ L+ A T   
Sbjct: 289 FFLAGEIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAG 348

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
           R+ S   ++ ++E +G+ P S  F+ ++  F + G+ ++A     +M+ SG+ P    YN
Sbjct: 349 RWESARILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYN 408

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            +I  +G       ++   + M  EG ++P++ T+N L+ A C       A  +  +M  
Sbjct: 409 VMIDTFGKYNCLGHAMDAFNKMREEG-IEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRE 467

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
           S   P   TYN +     +    +  E ++ EM+  G+ PN  T   ++  Y + G+ KE
Sbjct: 468 SNCPPGTTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKE 527

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A+     MK  G+ P+  +++ L+  + +   R                PDVITY+T+M 
Sbjct: 528 AIDCIEAMKADGLKPSPTMYHALVNAYAQRGLR----------------PDVITYTTLMK 571

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           A       DK   I+++M  +G  PD  A ++L  G
Sbjct: 572 ALIRVEQFDKVPVIYEEMITSGCAPDRKARAMLRSG 607



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/430 (22%), Positives = 187/430 (43%), Gaps = 13/430 (3%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM---DTFWKMKESGLTPTTSTYNTLIK 185
           ++S + E+   PD   ++ ++ +   + +  +A         ++ES L P    ++ LI 
Sbjct: 177 LLSLLREHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSDLIS 236

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG-M 244
            +  A  P+ +++LL      G + P       L+ A      + EA  +  +   +G +
Sbjct: 237 AFARAALPDAALELLASAQAIG-LTPRSNAVTALISALGTAGRVAEAEALFLEFFLAGEI 295

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           KP    YN +   Y +      AE+V+ EM   GV P+  T  +++  Y + G+ + A  
Sbjct: 296 KPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESARI 355

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
             + M+  GV P+  +F+ ++ GF +  D      VL  M+   V PD   Y+ +++ + 
Sbjct: 356 LLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDTFG 415

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
               +    + F+ M + GI+PD   ++ L   + +    ++A EL   M ES   P   
Sbjct: 416 KYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPGTT 475

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +  +I+        +    +  +M E G+ PN+ T+ TL+  Y  + +   A + ++ M
Sbjct: 476 TYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIEAM 535

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYH 544
           KA G+ P  + +  L  A    GL  +     + +K   R  +    + +PV     +Y 
Sbjct: 536 KADGLKPSPTMYHALVNAYAQRGLRPDVITYTTLMKALIRVEQF---DKVPV-----IYE 587

Query: 545 KEATTASYPN 554
           +  T+   P+
Sbjct: 588 EMITSGCAPD 597



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 89/363 (24%), Positives = 158/363 (43%), Gaps = 40/363 (11%)

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW---NVMHKMAASGMKPDVVTYNT 253
           ++LL L+ RE +  P+L +Y+ L+ +  N ++  +A     ++  +  S ++PD   ++ 
Sbjct: 175 LRLLSLL-REHDFLPDLASYSHLLASLLNTRDPPDAALLERLLGDLRESRLEPDAPLFSD 233

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRFARTMKEY 312
           + +A+A+    D A E++   +  G+ P       +IS     G++ EA   F       
Sbjct: 234 LISAFARAALPDAALELLASAQAIGLTPRSNAVTALISALGTAGRVAEAEALFLEFFLAG 293

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS-------- 364
            + P    +N L+KG+V I      ++VL  M +  V PD  TYS +++A++        
Sbjct: 294 EIKPRTRAYNALLKGYVRIASLKNAEQVLDEMSQCGVAPDEATYSLLVDAYTRAGRWESA 353

Query: 365 ----------------------TAGFMD-----KCKEIFDDMGKAGIKPDAHAYSILAKG 397
                                  AGF D     K   +  +M  +G++PD H Y+++   
Sbjct: 354 RILLKEMEADGVKPSSYVFSRILAGFRDRGDWQKAFAVLREMQASGVRPDRHFYNVMIDT 413

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           + +      A +    M E G  P+VV + T+I   C  G  DRA E+F++M E    P 
Sbjct: 414 FGKYNCLGHAMDAFNKMREEGIEPDVVTWNTLIDAHCKGGRHDRAAELFEEMRESNCPPG 473

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
             T+  ++    E       E +L  MK  G+ P   T+  L +    +G  KEA   + 
Sbjct: 474 TTTYNIMINLLGEQEHWEGVEAMLSEMKEQGLVPNIITYTTLVDVYGRSGRYKEAIDCIE 533

Query: 518 KIK 520
            +K
Sbjct: 534 AMK 536


>gi|15232008|ref|NP_187518.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207466|sp|Q9SS81.1|PP221_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09060
 gi|5923671|gb|AAD56322.1|AC009326_9 hypothetical protein [Arabidopsis thaliana]
 gi|332641194|gb|AEE74715.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 687

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/489 (23%), Positives = 226/489 (46%), Gaps = 36/489 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           +RS   L+N+ +E  +  + +++F      G  P+L TY  L+     +K F      + 
Sbjct: 114 IRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMSCKKKEFEKARGFLD 173

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            + + G  PD   ++ VIN  +++G +++A++ F +M E G+ P  + YN LI G+    
Sbjct: 174 WMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDVTCYNILIDGFLKEK 233

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             + +++L D +  + +V PN++T+N+++        + +   +  +M  +  + D+ TY
Sbjct: 234 DHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTY 293

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           +++       G  D+AE V  E++      +  T   ++ G+C+ GKIKE+L   R M E
Sbjct: 294 SSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM-E 352

Query: 312 YGVHPNLVIFNLLIKGFVE------------IMDRDG--------------------VDE 339
           +    N+V +N+LIKG +E            +M   G                    V++
Sbjct: 353 HKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNK 412

Query: 340 VLALMKEFRV---NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            L +M+E      + DV  Y++I++       +++   +  +M K G++ ++H  + L  
Sbjct: 413 ALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIG 472

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G +R+    +A   L  M ++G  P VV +  +I G C  G    A     +M E+G  P
Sbjct: 473 GLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKP 532

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           +LKT+  L+ G    R+   A E+       G+        +L     + G   +A  ++
Sbjct: 533 DLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVM 592

Query: 517 SKIKNKERT 525
           + ++++  T
Sbjct: 593 ANMEHRNCT 601



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 205/420 (48%), Gaps = 11/420 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
           L++  ++    + A  +++ L+E     P++ T+  +++ L+   R +    I  ++++N
Sbjct: 225 LIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWERMKQN 284

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
             + D   ++++I+   ++GN+++A   F ++ E   +    TYNT++ G+   GK +ES
Sbjct: 285 EREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKES 344

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++L  +M  + +V  N+ +YN+L++       I EA  +   M A G   D  TY     
Sbjct: 345 LELWRIMEHKNSV--NIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIH 402

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
               NG  ++A  V+ E+E +G   +      II   CK+ +++EA    + M ++GV  
Sbjct: 403 GLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVEL 462

Query: 317 NLVIFNLLIKGFVEIMDRDG-VDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKC 372
           N  + N LI G +    RD  + E    ++E   N   P V++Y+ ++     AG   + 
Sbjct: 463 NSHVCNALIGGLI----RDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKFGEA 518

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
                +M + G KPD   YSIL  G  R+++ + A EL    ++SG   +V++   +I G
Sbjct: 519 SAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHG 578

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            CS G +D A+ V   M     + NL T+ TLM G+ +     RA  I   M   G+ P 
Sbjct: 579 LCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPD 638



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 103/434 (23%), Positives = 203/434 (46%), Gaps = 8/434 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V++   +++ L + G+  +   I+  + +   +  L TY++L+  L      +   S+ +
Sbjct: 255 VKTHNIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFN 314

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++E     D + +N ++  F   G ++E+++  W++ E   +    +YN LIKG    G
Sbjct: 315 ELDERKASIDVVTYNTMLGGFCRCGKIKESLE-LWRIMEHKNSVNIVSYNILIKGLLENG 373

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           K +E+  +  LM  +G    +  TY + +   C    + +A  VM ++ +SG   DV  Y
Sbjct: 374 KIDEATMIWRLMPAKG-YAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAY 432

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            +I     +    ++A  ++ EM  +GV+ N   C  +I G  ++ ++ EA  F R M +
Sbjct: 433 ASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGK 492

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGF 368
            G  P +V +N+LI G  +        E  A +KE   N   PD+ TYS ++        
Sbjct: 493 NGCRPTVVSYNILICGLCK---AGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D   E++    ++G++ D   ++IL  G     + + A  ++  M       N+V + T
Sbjct: 550 IDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++ G+   G  +RA  ++  M + G+ P++ ++ T+M G    R    A E     +  G
Sbjct: 610 LMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHG 669

Query: 489 VHPQKSTFLLLAEA 502
           + P   T+ +L  A
Sbjct: 670 IFPTVYTWNILVRA 683



 Score =  155 bits (392), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 209/437 (47%), Gaps = 12/437 (2%)

Query: 88  PQEAQAIFNNLIEG-GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFN 146
           P+ A A+F++     G+  S V Y  +L  L+  +  N +  I+  +       D     
Sbjct: 23  PRAAFALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVAL 82

Query: 147 AVINAFSESGNMEEAMDTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           +VI  + ++   ++A+D F +M+E  G  P   +YNTL+  + +  K    V+ L     
Sbjct: 83  SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAF-VEAKQWVKVESLFAYFE 141

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
              V PNL+TYNVL++  C +K   +A   +  M   G KPDV +Y+T+    A+ G+ D
Sbjct: 142 TAGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLD 201

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR-FARTMKEYGVHPNLVIFNLL 324
            A E+  EM   GV P+     I+I G+ KE   K A+  + R +++  V+PN+   N++
Sbjct: 202 DALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIM 261

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I G  +    D   ++   MK+     D+ TYS++++    AG +DK + +F+++ +   
Sbjct: 262 ISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKA 321

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
             D   Y+ +  G+ R  + +++ EL   M E     N+V +  +I G   +G +D A  
Sbjct: 322 SIDVVTYNTMLGGFCRCGKIKESLELWRIM-EHKNSVNIVSYNILIKGLLENGKIDEATM 380

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG----VHPQKSTFLLLA 500
           ++  M   G + +  T+   + G        +A  ++Q +++ G    V+   S    L 
Sbjct: 381 IWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIIDCLC 440

Query: 501 EARR---ATGLTKEAKR 514
           + +R   A+ L KE  +
Sbjct: 441 KKKRLEEASNLVKEMSK 457



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 86/336 (25%), Positives = 155/336 (46%), Gaps = 1/336 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M  ++   + S   L+  L+E GK  EA  I+  +   G+     TY   +  L +    
Sbjct: 351 MEHKNSVNIVSYNILIKGLLENGKIDEATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYV 410

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           N    +M +VE +G   D   + ++I+   +   +EEA +   +M + G+   +   N L
Sbjct: 411 NKALGVMQEVESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEMSKHGVELNSHVCNAL 470

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G     +  E+   L  M + G  +P + +YN+L+   C      EA   + +M  +G
Sbjct: 471 IGGLIRDSRLGEASFFLREMGKNG-CRPTVVSYNILICGLCKAGKFGEASAFVKEMLENG 529

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
            KPD+ TY+ +     ++ + D A E+  +   +G++ +     I+I G C  GK+ +A+
Sbjct: 530 WKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAM 589

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M+      NLV +N L++GF ++ D +    +   M +  + PD+I+Y+TIM   
Sbjct: 590 TVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGL 649

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
                +    E FDD    GI P  + ++IL +  V
Sbjct: 650 CMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/341 (24%), Positives = 170/341 (49%), Gaps = 2/341 (0%)

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
           ++IK YG    P++++ +   M      +P +R+YN L+ A+   K   +  ++      
Sbjct: 83  SVIKTYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFET 142

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
           +G+ P++ TYN +     +  E ++A   +  M   G +P+  +   +I+   K GK+ +
Sbjct: 143 AGVAPNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDD 202

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL-ALMKEFRVNPDVITYSTIM 360
           AL     M E GV P++  +N+LI GF++  D     E+   L+++  V P+V T++ ++
Sbjct: 203 ALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMI 262

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           +  S  G +D C +I++ M +   + D + YS L  G       +KAE +   + E    
Sbjct: 263 SGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKAS 322

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
            +VV + T++ G+C  G +  ++E++ ++ EH  S N+ ++  L+ G  E  +   A  I
Sbjct: 323 IDVVTYNTMLGGFCRCGKIKESLELW-RIMEHKNSVNIVSYNILIKGLLENGKIDEATMI 381

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            ++M A G    K+T+ +        G   +A  ++ ++++
Sbjct: 382 WRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVES 422



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 54/196 (27%), Positives = 103/196 (52%), Gaps = 2/196 (1%)

Query: 335 DGVDEVLALMKE-FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
           D   +V   M+E F   P + +Y+T++NA+  A    K + +F     AG+ P+   Y++
Sbjct: 95  DQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNV 154

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L K   +++E EKA   L  M + GF P+V  ++T+I+     G +D A+E+FD+M E G
Sbjct: 155 LIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERG 214

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEIL-QIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           V+P++  +  L+ G+ + +    A E+  ++++   V+P   T  ++       G   + 
Sbjct: 215 VAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDC 274

Query: 513 KRILSKIKNKERTNEM 528
            +I  ++K  ER  ++
Sbjct: 275 LKIWERMKQNEREKDL 290



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/197 (25%), Positives = 81/197 (41%), Gaps = 35/197 (17%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K  CR TV S   L+  L + GK  EA A    ++E G KP L TY+ LL  L   ++
Sbjct: 490 MGKNGCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRK 549

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            +    +  Q  ++G++ D +  N +I+     G +++AM     M+    T    TYNT
Sbjct: 550 IDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNT 609

Query: 183 LIKGYGIAGKPEESVKLLDLM----------------------------------SREGN 208
           L++G+   G    +  +   M                                  +R   
Sbjct: 610 LMEGFFKVGDSNRATVIWGYMYKMGLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHG 669

Query: 209 VKPNLRTYNVLVRAWCN 225
           + P + T+N+LVRA  N
Sbjct: 670 IFPTVYTWNILVRAVVN 686


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/488 (24%), Positives = 216/488 (44%), Gaps = 42/488 (8%)

Query: 78  LMNSLIER-GKPQEAQAIF-NNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           L++ L+ R   P EA     ++L  G   P +  + +LL AL        +  + + + +
Sbjct: 100 LLSKLVRRFSSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRD 159

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG--LTPTTSTYNTLIKGYGIAGKP 193
             + PD + +  ++N   +SG++ +A+    +M   G  + P  +  NT++ G    G+ 
Sbjct: 160 ASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRL 219

Query: 194 EESVKLLD-LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV---- 248
           ++++  +D  M       PN  TYN L  A+C   +I  A  ++ +M   G+ P+V    
Sbjct: 220 QQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMN 279

Query: 249 ---------------------------------VTYNTIATAYAQNGEADQAEEVIVEME 275
                                            VTY+T+A+A+      D A E+  EM 
Sbjct: 280 TIIGGLCRVGRVGAALEFFREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMA 339

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
            +G +P+      +ISG  + G++ +A   A +MK+ G   +   +N+LI GF       
Sbjct: 340 DHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLH 399

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
              E+L  MK   + PDV TY+T+++    AG      E+   M   G +P    +  L 
Sbjct: 400 EAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLV 459

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            GY +  + ++A  +  +M E+   PN VI+ T+I   C    +D AI++FD+M E  V 
Sbjct: 460 HGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVP 519

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
            N+ T+  L+ G  + +   +A E++  M+     P   T  +L E     G T+  K  
Sbjct: 520 ANVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETERLKCF 579

Query: 516 LSKIKNKE 523
           + +   K+
Sbjct: 580 MQQRDQKD 587



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 207/450 (46%), Gaps = 47/450 (10%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           PD   FN+++ A   +GN+    + F  M+++ + P   TY  L+ G   +G   +++K+
Sbjct: 129 PDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKV 188

Query: 200 LDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA--ASGMKPDVVTYNTIAT 256
           LD MS  G +V P++   N +V   C    + +A   + +      G  P+ VTYN +A 
Sbjct: 189 LDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLAD 248

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           A+ + G+   A +++  ME  GV PN  T   II G C+ G++  AL F R  +   V P
Sbjct: 249 AFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFREKRT--VWP 306

Query: 317 ----NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG-FMDK 371
               N V ++ L   F+   + D   E+   M +    PD + Y T+++  + AG  +D 
Sbjct: 307 EARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDA 366

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA------------------------ 407
           C      M KAG K DA AY+IL  G+ R+++  +A                        
Sbjct: 367 CTTA-ASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLS 425

Query: 408 -----------EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
                      +ELL  MI+ G  P+VV F T++ G+C  G  D A+ +F  M E  + P
Sbjct: 426 GLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQP 485

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
           N   + TL+    ++R+   A ++   M+   V    +T+  L +  +   + ++A  ++
Sbjct: 486 NTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELM 545

Query: 517 SKIKNKERTNEMEAEEDIPVESLERLYHKE 546
            +++ +ER        D+ +E L  +   E
Sbjct: 546 DRMR-EERCTPNYVTVDVLMEWLPEIGETE 574



 Score =  165 bits (418), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 223/493 (45%), Gaps = 34/493 (6%)

Query: 30  QMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQ 89
           +++P+  +    +++L S S PT + P       +         +   L+     R  P 
Sbjct: 6   RLVPSAVHKLRSRRRLSSTSSPTPNSPNAAAILAILLHGHTPSAATLSLL-----RLSPG 60

Query: 90  EAQAIFNNLIEGGHK---PSLVTYTTLLA--------ALTIQK---RFNSIHS----IMS 131
            A  ++  + E  H     SL +  +L A        AL + K   RF+S       +  
Sbjct: 61  LASELYALIAEPSHAFTPASLASLHSLAARHRIPPPSALLLSKLVRRFSSPAEAAGFLRD 120

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +      PD   FN+++ A   +GN+    + F  M+++ + P   TY  L+ G   +G
Sbjct: 121 SLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSG 180

Query: 192 KPEESVKLLDLMSREG-NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA--ASGMKPDV 248
              +++K+LD MS  G +V P++   N +V   C    + +A   + +      G  P+ 
Sbjct: 181 HVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCAPNA 240

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           VTYN +A A+ + G+   A +++  ME  GV PN  T   II G C+ G++  AL F R 
Sbjct: 241 VTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEFFRE 300

Query: 309 MKEYGVHP----NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
            +   V P    N V ++ L   F+   + D   E+   M +    PD + Y T+++  +
Sbjct: 301 KRT--VWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLT 358

Query: 365 TAG-FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
            AG  +D C      M KAG K DA AY+IL  G+ R+++  +A ELL  M   G  P+V
Sbjct: 359 QAGRLLDACTTA-ASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDV 417

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
             + T++SG C  G      E+   M + G  P++ TF TL+ GY +A +   A  I + 
Sbjct: 418 YTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRS 477

Query: 484 MKAFGVHPQKSTF 496
           M    + P    +
Sbjct: 478 MDEARIQPNTVIY 490



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 81/160 (50%), Gaps = 2/160 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L++ L + G       +  ++I+ G +PS+VT+ TL+       + +    I  
Sbjct: 417 VYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFR 476

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++E  + P+++ +N +I+   +S  ++ A+  F +M+E  +    +TYN L+KG     
Sbjct: 477 SMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKK 536

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE 231
             E++ +L+D M RE    PN  T +VL+  W  E   TE
Sbjct: 537 MAEKAFELMDRM-REERCTPNYVTVDVLME-WLPEIGETE 574


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 220/500 (44%), Gaps = 68/500 (13%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +F  + E G+  ++  +TTL+     + R ++  S++ +++ N ++PD + +N  I+ F 
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281

Query: 154 ESGNMEEAMDTFWKMKESGLT-----------------------------------PTTS 178
           ++G ++ A   F +MK +GL                                    P   
Sbjct: 282 KAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAY 341

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVK---------------------------- 210
            YNT+I GYG+AGK E++  LL+   R+G +                             
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401

Query: 211 -----PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
                PNL TYN+++   C    +  A  V   M  +G+ P+V+T N +     +    D
Sbjct: 402 KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLD 461

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A  +   ++H   +P+  T   +I G  + G++ EA +    M +    PN V++  LI
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           + F +   ++   ++   M     +PD++  +T M+    AG ++K + +F ++   G  
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI 581

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PDA +Y+IL  G V+     +A EL  TM E G   +   + T+I G+C  G +++A ++
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
            ++M   G  P + T+ +++ G ++  +   A  + +  K+ G+      +  L +    
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701

Query: 506 TGLTKEAKRILSKIKNKERT 525
            G   EA  I+ ++  K  T
Sbjct: 702 VGRIDEAYLIMEELMQKGLT 721



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 99/462 (21%), Positives = 213/462 (46%), Gaps = 7/462 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M K++   + +   +++ L + GK + A  + + + + G  P+++T   ++  L   +R 
Sbjct: 401 MKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRL 460

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +   SI   ++     PD++ + ++I      G ++EA   + +M ++   P    Y +L
Sbjct: 461 DDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSL 520

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I+ +   G+ E+  K+ + M R G   P+L   N  +        I +   +  ++   G
Sbjct: 521 IRNFFKCGRKEDGHKIYNEMLRLG-CSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             PD  +Y  +     + G A +A E+   M+  G   + R    +I G+CK GK+ +A 
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIM 360
           +    MK  G  P +V +  +I G  +I   D +DE   L +E +   +  +V+ YS+++
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKI---DRLDEAYMLFEEAKSKGIELNVVIYSSLI 696

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           + +   G +D+   I +++ + G+ P+ + ++ L    V+ +E  +A     +M +    
Sbjct: 697 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCT 756

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN + ++ +I G C     ++A   + +M + G  PN+ T+ T++ G ++A     A+ +
Sbjct: 757 PNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTL 816

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            +  K  G     + +  + E         +A R+  + + K
Sbjct: 817 FEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLK 858



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 202/434 (46%), Gaps = 7/434 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++  +++ L +  +  +A +IF  L     +P  VTY +L+  L    R +  + +  
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ +    P+++ + ++I  F + G  E+    + +M   G +P     NT +     AG
Sbjct: 504 QMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAG 563

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E+   L   +   G + P+ R+Y +L+          EA+ + + M   G   D   Y
Sbjct: 564 EIEKGRALFQEIKNLGFI-PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAY 622

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   + ++G+ ++A +++ EM+  G +P   T G +I G  K  ++ EA       K 
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            G+  N+VI++ LI GF ++     +DE   +M+E     + P+V T++ +++A   A  
Sbjct: 683 KGIELNVVIYSSLIDGFGKV---GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           + +    F  M      P+   YSIL  G  + ++  KA      M + GF PNV  +TT
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +ISG    G++  A  +F+K  E G   +   +  ++ G S A +   A  + +  +  G
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859

Query: 489 VHPQKSTFLLLAEA 502
                 T ++L ++
Sbjct: 860 CSIYTKTCVVLLDS 873



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/452 (23%), Positives = 203/452 (44%), Gaps = 2/452 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S   +++ L  +G+  EA   F  + +    P+L TY  ++  L    +  +   + 
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDA-IPNLSTYNIMIDMLCKAGKLETALVVR 432

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +++ G+ P+ I  N +++   ++  +++A   F  +      P   TY +LI+G G  
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRH 492

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ +E+ KL + M  + N  PN   Y  L+R +       +   + ++M   G  PD++ 
Sbjct: 493 GRVDEAYKLYEQM-LDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLL 551

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            NT      + GE ++   +  E+++ G  P+ R+  I+I G  K G   EA     TMK
Sbjct: 552 LNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK 611

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G   +   +N +I GF +    +   ++L  MK     P V+TY ++++  +    +D
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLD 671

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +F++    GI+ +   YS L  G+ +    ++A  ++  +++ G  PNV  +  ++
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
                   +  A+  F  M +   +PN  T+  L+ G  + R+  +A    Q M+  G  
Sbjct: 732 DALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFK 791

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+  +       G   EA  +  K K K
Sbjct: 792 PNVFTYTTMISGLAKAGNIVEADTLFEKFKEK 823



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/456 (21%), Positives = 194/456 (42%), Gaps = 35/456 (7%)

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
            G  PS  T   ++ +    ++     + +  + +    P    +  +I A S S + + 
Sbjct: 159 AGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDC 218

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
            +  F +M+E G       + TLI+ +   G+ + ++ LLD M +  +++P++  YNV +
Sbjct: 219 MLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM-KSNSLEPDVVLYNVCI 277

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
             +     +  AW   H+M A+G+  D VTY ++     +    ++A E+   M+ N   
Sbjct: 278 DCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQV 337

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI-----KGFV------ 329
           P       +I GY   GK ++A       +  G  P++V +N ++     KG V      
Sbjct: 338 PCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKK 397

Query: 330 -EIMDRDGVDE----------------------VLALMKEFRVNPDVITYSTIMNAWSTA 366
            E M +D +                        V   MK+  + P+VIT + +++    A
Sbjct: 398 FEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKA 457

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             +D    IF+ +     +PDA  Y  L +G  R    ++A +L   M+++   PN V++
Sbjct: 458 QRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVY 517

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           T++I  +   G  +   +++++M   G SP+L    T M    +A +  +   + Q +K 
Sbjct: 518 TSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKN 577

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            G  P   ++ +L       G   EA  +   +K +
Sbjct: 578 LGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ 613



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/439 (21%), Positives = 188/439 (42%), Gaps = 10/439 (2%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLIKG 186
           S+ +++ E  ++P+      VI       ++  A++ F W  + +        YN+L+  
Sbjct: 83  SVENRLAELDLNPNP---ELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMV 139

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
                K     ++L+ MS  G   P+  T   +V ++   + + EA+  +  M     +P
Sbjct: 140 MARTRKFNCLEQILEEMSIAG-FGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRP 198

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
               Y  +  A + + ++D    +  +M+  G   N      +I  + +EG++  AL   
Sbjct: 199 AFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLL 258

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             MK   + P++V++N+ I  F +    D   +    MK   +  D +TY++++     A
Sbjct: 259 DEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKA 318

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             +++  E+F+ M +    P A+AY+ +  GY    + E A  LL      G  P+VV +
Sbjct: 319 DRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSY 378

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
             I+S     G +D A++ F++M +  + PNL T+  ++    +A +   A  +   MK 
Sbjct: 379 NCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKD 437

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKE 546
            G+ P   T  ++ +         +A  I   + +K    +      + +E L R    +
Sbjct: 438 AGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSL-IEGLGRHGRVD 496

Query: 547 ATTASYPNLL---QIPNVV 562
                Y  +L   QIPN V
Sbjct: 497 EAYKLYEQMLDANQIPNAV 515



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 1/241 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   +++ L +  +  EA  +F      G + ++V Y++L+       R +  + IM
Sbjct: 653 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIM 712

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G+ P+   +N +++A  ++  + EA+  F  MK+   TP   TY+ LI G    
Sbjct: 713 EELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKI 772

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K  ++      M ++G  KPN+ TY  ++       NI EA  +  K    G   D   
Sbjct: 773 RKFNKAFVFWQEMQKQG-FKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAI 831

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN I    +    A  A  +  E    G     +TC +++    K   I++A      ++
Sbjct: 832 YNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891

Query: 311 E 311
           E
Sbjct: 892 E 892


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 196/419 (46%), Gaps = 1/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   +RG  + A  +F  L   G  P+  TY  ++  L  +  F ++  ++ +++E G
Sbjct: 246 LVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERG 305

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +D +   +N++++A  + G   E   T   + E+G  P  +TYNTLI G    GK  E+ 
Sbjct: 306 VDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAE 365

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL+   + G + PN  +Y  L+  +C +     A+++   M   G   D+V Y  +   
Sbjct: 366 ELLEHAIKRG-LSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHG 424

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               GE D A  V  +M   GV P+     ++++G CK+G++  A      M    +  +
Sbjct: 425 LVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLD 484

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             +   L+ GF+     D   ++  L     ++P V+ Y+ ++  +   G M+       
Sbjct: 485 AFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQ 544

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M      PD   YS +  GYV++ +   A +L   M++    PNVV +T++I+G+C  G
Sbjct: 545 RMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTG 604

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
              RA + F++M   G+ PN+ T+  L+  + +  +  +A    ++M      P   TF
Sbjct: 605 DSSRAEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTF 663



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/451 (25%), Positives = 208/451 (46%), Gaps = 3/451 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V +   L+N+LI++ K + A+ ++  +++        +   ++  L  +++      +++
Sbjct: 170 VIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKLIN 229

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
                G  P+ +F+N +++ + + G++E A   F ++K  G  PTT TY  +I G     
Sbjct: 230 DRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCKKC 289

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +    LL  M   G V  N++ YN +V A        E    +  +  +G +PD+ TY
Sbjct: 290 NFKAVDGLLVEMKERG-VDVNVQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTY 348

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+ +   ++G+  +AEE++      G+ PN  +   +I  YCK+GK   A      M E
Sbjct: 349 NTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTE 408

Query: 312 YGVHP-NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
            G HP +LV +  L+ G V   + D    V   M E  V PD   Y+ +MN     G + 
Sbjct: 409 KG-HPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDANVYNVLMNGLCKKGRLS 467

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
             K +  +M    +  DA   + L  G++R  + ++A++L    I  G  P VV +  +I
Sbjct: 468 AAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMI 527

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            G+C  G M+ A+    +M +   SP+  T+ T++ GY +      A ++   M      
Sbjct: 528 KGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCK 587

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           P   T+  L      TG +  A++   ++++
Sbjct: 588 PNVVTYTSLINGFCRTGDSSRAEKTFEEMRS 618



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/460 (21%), Positives = 205/460 (44%), Gaps = 15/460 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V+    ++++ I+ G   E       + E G +P + TY TL++      + +    ++ 
Sbjct: 310 VQVYNSIVDAQIKHGCKIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLE 369

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
              + G+ P+ + +  +I+ + + G    A D F  M E G       Y  L+ G   AG
Sbjct: 370 HAIKRGLSPNKLSYTPLIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAG 429

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + + ++ + D M   G V P+   YNVL+   C +  ++ A  ++ +M    +  D    
Sbjct: 430 EVDVALTVRDKMVERG-VLPDANVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVS 488

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+   + ++G+ D+A+++       G+ P       +I GYCK G + +AL   + MK+
Sbjct: 489 ATLVDGFIRHGKLDEAKKLFELTIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKD 548

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
               P+   ++ +I G+V+  D     ++   M + +  P+V+TY++++N +   G   +
Sbjct: 549 GDHSPDEFTYSTIIDGYVKQNDLHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSR 608

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            ++ F++M  +G+KP+   Y+IL   + +E +  KA      M+ +   PN V F  +I+
Sbjct: 609 AEKTFEEMRSSGLKPNVVTYTILIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLIN 668

Query: 432 GWCSD------GSMDRAIEV--------FDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  ++         + ++E+        F  M   G    +  + +++      +    A
Sbjct: 669 GLTNNLATAVSNKANESLEIKASLMMDFFRTMISDGWEQRVAAYNSVLICLCHHKMVNAA 728

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
            ++   M   G+ P   +F  L       G +KE K  +S
Sbjct: 729 LQLRDKMTGKGIFPDPVSFAALVYGLCLEGRSKEWKNTIS 768



 Score =  139 bits (349), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/374 (24%), Positives = 180/374 (48%), Gaps = 8/374 (2%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           FN+L++G       + ++LL  L   + F  + +++  ++   + P     + V+ A+ +
Sbjct: 93  FNDLLDG------FSCSSLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVGAYVD 146

Query: 155 SGNMEEAMDTFWKMKE-SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           SG +  A++ +    +     P     N L+       K E + K+ + M +      N 
Sbjct: 147 SGLVNRALELYHIAYDIHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNY 206

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            +  ++VR  C E+ + E   +++     G  P++V YNT+   Y + G+ ++A  +  E
Sbjct: 207 -SVCIMVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKE 265

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           ++  G  P   T GI+I+G CK+   K        MKE GV  N+ ++N ++   ++   
Sbjct: 266 LKMKGFLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGC 325

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
           +  V + L  + E    PD+ TY+T+++     G + + +E+ +   K G+ P+  +Y+ 
Sbjct: 326 KIEVGKTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTP 385

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L   Y ++ +  +A +L + M E G   ++V +  ++ G  + G +D A+ V DKM E G
Sbjct: 386 LIHVYCKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERG 445

Query: 454 VSPNLKTFETLMWG 467
           V P+   +  LM G
Sbjct: 446 VLPDANVYNVLMNG 459



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/169 (22%), Positives = 81/169 (47%)

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           PDVI  + ++NA      ++  ++++++M K     D ++  I+ +G  +E++ E+  +L
Sbjct: 168 PDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVEEGRKL 227

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           +      G  PN+V + T++ G+   G ++RA  +F ++   G  P  +T+  ++ G  +
Sbjct: 228 INDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMINGLCK 287

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
                  + +L  MK  GV      +  + +A+   G   E  + L  I
Sbjct: 288 KCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVGKTLRWI 336


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 194/406 (47%), Gaps = 2/406 (0%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           +P+LVTYTTL+AA          HS+  ++  NG+ PD +  ++++  F   G + EA  
Sbjct: 318 QPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAV 377

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
            F +M E GL P   +Y T+I     +G+  E+  L   M   G +  ++ T   ++   
Sbjct: 378 LFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRG-ISFDIVTCTTVMDGL 436

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
                  EA  V   +    + P+ VTY+ +   Y + G+ + AE V+ +ME   V PN 
Sbjct: 437 FKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNV 496

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T   II+GY K+G + +A+   R M +  V PN +++ +LI G+ +  ++D  D+    
Sbjct: 497 ITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKE 556

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           MK  R+    + +  ++N     G MD+ + +  DM   GI PD   Y+ L  GY +E  
Sbjct: 557 MKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGN 616

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
              A  ++  M E     +VV +  +I G    G  D    V  +M E G++P+  T+ T
Sbjct: 617 QLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPR-YVCSRMIELGLAPDCITYNT 675

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLT 509
           ++  Y    +   A +IL  MK++G+ P   T+ +L      TG  
Sbjct: 676 IINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFV 721



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 212/437 (48%), Gaps = 26/437 (5%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           VTY T++     +   +    ++S++ + G+  DSI  N ++  +   G ++ A    + 
Sbjct: 163 VTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYN 222

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           + + G+T      NTLI GY  A    ++ +L++  S   +VK ++ TYN L++A+C   
Sbjct: 223 LVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIE-NSWRSDVKIDIVTYNTLLKAFCKTG 281

Query: 228 NITEA----------W---------NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           ++T A          W         +V+ +     ++P +VTY T+  AY +    +++ 
Sbjct: 282 DLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESH 341

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
            +  +M  NG+ P+  TC  I+ G+C+ GK+ EA    R M E G+ PN V +  +I   
Sbjct: 342 SLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIIN-- 399

Query: 329 VEIMDRDGVDEVLALMKEFRVNP---DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
             +     V E   L  +  V     D++T +T+M+     G   + +E+F+ + K  + 
Sbjct: 400 -SLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLA 458

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P+   YS L  GY +  + E AE +L  M +    PNV+ F++II+G+   G + +A++V
Sbjct: 459 PNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDV 518

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
             +M +  V PN   +  L+ GY +A +   A++  + MK+  +      F +L    + 
Sbjct: 519 LREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKR 578

Query: 506 TGLTKEAKRILSKIKNK 522
            G   EA+ ++  + +K
Sbjct: 579 VGRMDEARSLIIDMYSK 595



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 157/676 (23%), Positives = 270/676 (39%), Gaps = 110/676 (16%)

Query: 8   KAFLQTDDKYQSGSTI--VKKGWGQMIPAKKNNPGEKKQLYSNSKPTDSQPQT----HCS 61
           KAF +T D  ++ S    +   W      K N+   + ++  N +PT     T    +C 
Sbjct: 275 KAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEI-KNLQPTLVTYTTLIAAYCK 333

Query: 62  FCMNKESCRTVRSM------------TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVT 109
           F   +ES    + M            + ++      GK  EA  +F  + E G  P+ V+
Sbjct: 334 FVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVS 393

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK 169
           Y T++ +L    R     ++ SQ+   G+  D +    V++   + G  +EA + F  + 
Sbjct: 394 YATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETIL 453

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
           +  L P   TY+ L+ GY   GK E +  +L  M +E +V PN+ T++ ++  +  +  +
Sbjct: 454 KLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKE-HVPPNVITFSSIINGYAKKGML 512

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEE-------------------- 269
           ++A +V+ +M    + P+ + Y  +   Y + GE D A++                    
Sbjct: 513 SKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDIL 572

Query: 270 ---------------VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
                          +I++M   G+ P+      +I GY KEG    AL   + MKE  +
Sbjct: 573 LNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNI 632

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
             ++V +N LIKG + +   D    V + M E  + PD ITY+TI+N +   G  +   +
Sbjct: 633 RFDVVAYNALIKGLLRLGKYDP-RYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALD 691

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           I ++M   GI P+A  Y+IL  G                + ++GF P  +    ++  + 
Sbjct: 692 ILNEMKSYGIMPNAVTYNILIGG----------------LCKTGFVPTPITHKFLVKAYS 735

Query: 435 SDGSMDRAIE-----------------VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
                D+ ++                 V D+M + G+S +L T+  L+ GY       +A
Sbjct: 736 RSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKA 795

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI---KNKERTNEMEAEEDI 534
            +    M   G+ P  +T+  L       GL +E      K+    N+       A  DI
Sbjct: 796 LKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDI 855

Query: 535 PVESLER--------LYHKEATTASYPNLLQIPNVVSSDQKGSAAA----------LKKG 576
            V    R        + H E  T  +   L+  NV+ SD   S             L KG
Sbjct: 856 LVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKG 915

Query: 577 RMLLRDADSSLECSWF 592
           R+        L C W 
Sbjct: 916 RIPNSFTYDILTCGWL 931



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 207/461 (44%), Gaps = 69/461 (14%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++ +++RG   ++    N L++G  +  LV Y                  +M  + + G
Sbjct: 184 LLSEMVKRGLCFDSITC-NILVKGYCRIGLVQYA---------------EWVMYNLVDGG 227

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG------ 191
           +  D I  N +I+ + E+  M +A +       S +     TYNTL+K +   G      
Sbjct: 228 VTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAE 287

Query: 192 ----------KPEESVKLLDLMSRE--GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
                     K E+ +K  D++++    N++P L TY  L+ A+C    + E+ ++  KM
Sbjct: 288 SLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKM 347

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN--------------GR- 284
             +G+ PDVVT ++I   + ++G+  +A  +  EM   G+ PN              GR 
Sbjct: 348 IMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRV 407

Query: 285 --------------------TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
                               TC  ++ G  K GK KEA     T+ +  + PN V ++ L
Sbjct: 408 MEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSAL 467

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           + G+ ++   +  + VL  M++  V P+VIT+S+I+N ++  G + K  ++  +M +  +
Sbjct: 468 LDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNV 527

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+   Y+IL  GY +  E + A++    M       + VIF  +++     G MD A  
Sbjct: 528 MPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRMDEARS 587

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +   M   G+ P++  + +L+ GY +      A  I+Q MK
Sbjct: 588 LIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMK 628



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 116/517 (22%), Positives = 231/517 (44%), Gaps = 54/517 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLL-----AALTIQKRFNS------- 125
           L+   +   +   A A F+++   G  P+L  + TLL     + L  Q +          
Sbjct: 65  LIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCG 124

Query: 126 -----------IHSI---------MSQVEENG-MDPDSIFFNAVINAFSESGNMEEAMDT 164
                      +HS+         +  +  N  +D D++ +N VI  F + G +++    
Sbjct: 125 VVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDNVTYNTVIWGFCQKGLVDQGFGL 184

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
             +M + GL   + T N L+KGY   G  + +  ++  +  +G V  ++   N L+  +C
Sbjct: 185 LSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLV-DGGVTKDVIGLNTLIDGYC 243

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE---------------- 268
               +++A  ++     S +K D+VTYNT+  A+ + G+  +AE                
Sbjct: 244 EAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRL 303

Query: 269 ---EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
              +V+ + E   +QP   T   +I+ YCK   ++E+    + M   G+ P++V  + ++
Sbjct: 304 KNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSIL 363

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            GF           +   M E  ++P+ ++Y+TI+N+   +G + +   +   M   GI 
Sbjct: 364 YGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGIS 423

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
            D    + +  G  +  + ++AEE+  T+++    PN V ++ ++ G+C  G M+ A  V
Sbjct: 424 FDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELV 483

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
             KM +  V PN+ TF +++ GY++     +A ++L+ M    V P    + +L +    
Sbjct: 484 LQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFK 543

Query: 506 TGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
            G    A     ++K++ R  E     DI + +L+R+
Sbjct: 544 AGEQDVADDFCKEMKSR-RLEESNVIFDILLNNLKRV 579



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 176/395 (44%), Gaps = 22/395 (5%)

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
           FF  +I  +        A  TF  M+  GL PT   +NTL+  +  +G   + VKL+   
Sbjct: 61  FFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQ-VKLMYSD 119

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
                V P++ + NVLV + C   ++  A   +       +  D VTYNT+   + Q G 
Sbjct: 120 MLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDI--DNVTYNTVIWGFCQKGL 177

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            DQ   ++ EM   G+  +  TC I++ GYC+ G ++ A      + + GV  +++  N 
Sbjct: 178 VDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNT 237

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK-- 381
           LI G+ E +      E++       V  D++TY+T++ A+   G + + + +F+++    
Sbjct: 238 LIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFW 297

Query: 382 -----------------AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
                              ++P    Y+ L   Y +    E++  L   MI +G  P+VV
Sbjct: 298 KDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVV 357

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
             ++I+ G+C  G +  A  +F +M E G+ PN  ++ T++    ++ +   A  +   M
Sbjct: 358 TCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQM 417

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
              G+     T   + +     G TKEA+ +   I
Sbjct: 418 VVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFETI 452


>gi|297836334|ref|XP_002886049.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331889|gb|EFH62308.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 755

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 204/394 (51%), Gaps = 7/394 (1%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           ++  +++ G+ PD + F   I+   ++G + EA    +K+K  G++  + + +++I G+ 
Sbjct: 360 LLMGMKDYGIRPDIVAFTVFIDKLCKAGFLREATSVLFKLKLFGISQDSVSVSSVIDGFC 419

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
             GKPEE++KL+        ++PN+  Y+  +   C+  ++  A  +  ++   G+ PD 
Sbjct: 420 KVGKPEEAIKLI----HSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDC 475

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
             Y T+   Y   G  D+A +    +  +G  P+  T  ++I    K G I +A    R 
Sbjct: 476 YCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGACSKFGSISDAESVFRI 535

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           MK  G+HP++V +N L+ G+ +    + V E++  M+   ++PDV TY+ ++++    G+
Sbjct: 536 MKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGY 595

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +D+  EI  ++ + G  P A A++ +  G  +  + ++A  L   M +    P+VV  + 
Sbjct: 596 VDEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSA 655

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           ++ G+C    M++AI +FDK+ + G+ P++  + TL+ GY       +A E++ +M   G
Sbjct: 656 LLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRG 715

Query: 489 VHPQKSTFLLLA---EARRATGLTKEAKRILSKI 519
           + P +ST   L    E +R     + A  +L +I
Sbjct: 716 MLPNESTHHALVVGLEGKRFMNSEEHASMLLEEI 749



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 97/353 (27%), Positives = 162/353 (45%), Gaps = 33/353 (9%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G +P +V +T  +  L          S++ +++  G+  DS+  ++VI+ F + G  EEA
Sbjct: 368 GIRPDIVAFTVFIDKLCKAGFLREATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEA 427

Query: 162 MD--------------------------------TFWKMKESGLTPTTSTYNTLIKGYGI 189
           +                                  F ++ E GL P    Y T+I GY  
Sbjct: 428 IKLIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCT 487

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+ +++ +    + + GN  P+L TY +L+ A     +I++A +V   M   G+ PDVV
Sbjct: 488 LGRTDKAFQFFGALLKSGN-PPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVV 546

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN +   Y +  + ++  E+I EM   G+ P+  T  I+I      G + EA      +
Sbjct: 547 TYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMVVRGYVDEANEIISEL 606

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              G  P+ + F  +I G  +  D      +   M + RV PDV+T S +++ +  A  M
Sbjct: 607 IRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRM 666

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +K   +FD +  AG+KPD   Y+ L  GY    + EKA EL+  M++ G  PN
Sbjct: 667 EKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPN 719



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 80/378 (21%), Positives = 172/378 (45%), Gaps = 39/378 (10%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           F  +I+   +   ++ A+   +K+ + G+ P+     +L++    A   E + + ++ M 
Sbjct: 271 FCMLIDCCIKERKVDMALKLTYKIDQFGIFPSRGVCISLVEEILRAHGLELAREFVEHML 330

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
             G    N    ++ +R +C++    + W ++  M   G++PD+V +        + G  
Sbjct: 331 SRGR-HLNAALLSLFIRKYCSDGYFDKGWELLMGMKDYGIRPDIVAFTVFIDKLCKAGFL 389

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A  V+ +++  G+  +  +   +I G+CK GK +EA++                    
Sbjct: 390 REATSVLFKLKLFGISQDSVSVSSVIDGFCKVGKPEEAIK-------------------- 429

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
                             L+  FR+ P++  YS+ ++   + G M +   IF ++ + G+
Sbjct: 430 ------------------LIHSFRLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL 471

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            PD + Y+ +  GY      +KA +    +++SG  P+++ +T +I      GS+  A  
Sbjct: 472 LPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGACSKFGSISDAES 531

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           VF  M   G+ P++ T+  LM+GY +  Q  +  E++  M++ G+ P  +T+ +L  +  
Sbjct: 532 VFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSMV 591

Query: 505 ATGLTKEAKRILSKIKNK 522
             G   EA  I+S++  +
Sbjct: 592 VRGYVDEANEIISELIRR 609



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 71/295 (24%), Positives = 142/295 (48%), Gaps = 1/295 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           +  ++++   G    A  IF  + E G  P    YTT++       R +        + +
Sbjct: 444 SSFLSNICSTGDMLRASTIFQEIFELGLLPDCYCYTTMIDGYCTLGRTDKAFQFFGALLK 503

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
           +G  P  I +  +I A S+ G++ +A   F  MK  GL P   TYN L+ GYG   +  +
Sbjct: 504 SGNPPSLITYTLLIGACSKFGSISDAESVFRIMKTEGLHPDVVTYNNLMYGYGKTHQLNK 563

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
             +L+D M R   + P++ TYN+L+ +      + EA  ++ ++   G  P  + +  + 
Sbjct: 564 VFELIDEM-RSAGISPDVATYNILIHSMVVRGYVDEANEIISELIRRGFVPSALAFTDVI 622

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              ++ G+  +A  +   M    V+P+  TC  ++ GYC+  ++++A+     + + G+ 
Sbjct: 623 GGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKLLDAGLK 682

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           P++V++N LI G+  + D +   E++ LM +  + P+  T+  ++       FM+
Sbjct: 683 PDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVVGLEGKRFMN 737



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 152/319 (47%), Gaps = 4/319 (1%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           ++   + GKP+EA  + ++      +P++  Y++ L+ +          +I  ++ E G+
Sbjct: 415 IDGFCKVGKPEEAIKLIHSF---RLRPNIFVYSSFLSNICSTGDMLRASTIFQEIFELGL 471

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVK 198
            PD   +  +I+ +   G  ++A   F  + +SG  P+  TY  LI      G   ++  
Sbjct: 472 LPDCYCYTTMIDGYCTLGRTDKAFQFFGALLKSGNPPSLITYTLLIGACSKFGSISDAES 531

Query: 199 LLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAY 258
           +  +M  EG + P++ TYN L+  +     + + + ++ +M ++G+ PDV TYN +  + 
Sbjct: 532 VFRIMKTEG-LHPDVVTYNNLMYGYGKTHQLNKVFELIDEMRSAGISPDVATYNILIHSM 590

Query: 259 AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
              G  D+A E+I E+   G  P+      +I G  K G  +EA      M +  V P++
Sbjct: 591 VVRGYVDEANEIISELIRRGFVPSALAFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDV 650

Query: 319 VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDD 378
           V  + L+ G+      +    +   + +  + PDV+ Y+T+++ + + G ++K  E+   
Sbjct: 651 VTCSALLHGYCRAQRMEKAIVLFDKLLDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGL 710

Query: 379 MGKAGIKPDAHAYSILAKG 397
           M + G+ P+   +  L  G
Sbjct: 711 MVQRGMLPNESTHHALVVG 729



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/113 (25%), Positives = 59/113 (52%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T ++  L +RG  QEA  ++  + +   KP +VT + LL      +R      +  ++
Sbjct: 617 AFTDVIGGLSKRGDFQEAFILWFYMADLRVKPDVVTCSALLHGYCRAQRMEKAIVLFDKL 676

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
            + G+ PD + +N +I+ +   G++E+A +    M + G+ P  ST++ L+ G
Sbjct: 677 LDAGLKPDVVLYNTLIHGYCSVGDIEKACELIGLMVQRGMLPNESTHHALVVG 729


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 216/443 (48%), Gaps = 7/443 (1%)

Query: 80  NSLI----ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           NS+I    + G+ +EA ++   +   G  P  ++Y   + A     R+     ++ Q+E 
Sbjct: 254 NSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMES 313

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ PD I ++A I A    G  E ++D   +M   G+ P T  +N+ I   G  G+ E+
Sbjct: 314 QGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEK 373

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +V+LL  ++  G + P+  ++N  + A        EA  ++ +M A  +KPD ++YN+  
Sbjct: 374 AVELLREVTALG-LTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAI 432

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
            A  + G+ + A E+  +M   G+ PN  +  I I    + G+ +E L   R M   G+ 
Sbjct: 433 EACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLT 492

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN++ +N  IK   +    +   ++LA MKE  + PD ITY++ + A S  G   +   +
Sbjct: 493 PNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVAL 552

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
             +M   G+ PD  +Y+     Y +  + E+A ELL  M   G  PNV+ + ++I     
Sbjct: 553 LREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGR 612

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPW-RAEEILQIMKAFGVHPQKS 494
            G  ++A+++  ++ E  V+P+L ++  L       R  W  A ++L+ M A G+ P   
Sbjct: 613 GGEWEKALDLLKELKETAVAPDLMSY-NLAISACGKRGRWEEALDLLREMPAEGLTPDVI 671

Query: 495 TFLLLAEARRATGLTKEAKRILS 517
           ++     A  A G  ++A  +L+
Sbjct: 672 SYTSAIRACNAEGEWEKALGLLN 694



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 203/418 (48%), Gaps = 1/418 (0%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G  P  +TY +++     + ++    S+++++   G+ P++I +N  I A   SG  +EA
Sbjct: 245 GLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEA 304

Query: 162 MDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
           ++   +M+  G+TP   +Y+  IK  G  G+ E SV LLD M+  G V PN   +N  + 
Sbjct: 305 VEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRG-VAPNTIHFNSAIV 363

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP 281
           A        +A  ++ ++ A G+ PD  ++N+   A  ++G   +A E++ EM    ++P
Sbjct: 364 ACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKP 423

Query: 282 NGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVL 341
           +  +    I    K G+ + AL   R M   G+ PN++  N+ I+   E        E+L
Sbjct: 424 DAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELL 483

Query: 342 ALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
             M    + P+VITY++ +      G  +K  ++   M +  + PD+  Y+       + 
Sbjct: 484 RQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKR 543

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
              ++A  LL  M   G  P+V+ +T  I  +  +G  +RA+E+  +M   G++PN+ T+
Sbjct: 544 GRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITY 603

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            +++       +  +A ++L+ +K   V P   ++ L   A    G  +EA  +L ++
Sbjct: 604 NSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREM 661



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 91/369 (24%), Positives = 189/369 (51%), Gaps = 3/369 (0%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           + + +   G  P+ + + + + A     ++     ++ +V   G+ PD+  FN+ I A +
Sbjct: 342 LLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACT 401

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           +SG  +EA++   +M    L P   +YN+ I+  G  G+ E +++L   M  +G + PN+
Sbjct: 402 KSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKG-LTPNV 460

Query: 214 RTYNVLVRAWCNEKN-ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
            + N+ +RA C E+    E   ++ +M A G+ P+V+TYN+      + G+ ++A +++ 
Sbjct: 461 ISSNIAIRA-CGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLA 519

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           +M+   + P+  T    I+   K G+ KEA+   R M   G+ P+++ +   I  + +  
Sbjct: 520 KMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNG 579

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
             +   E+L  M    + P+VITY++++ A    G  +K  ++  ++ +  + PD  +Y+
Sbjct: 580 QWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYN 639

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           +      +    E+A +LL  M   G  P+V+ +T+ I    ++G  ++A+ + + M  H
Sbjct: 640 LAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAH 699

Query: 453 GVSPNLKTF 461
           GVSP   ++
Sbjct: 700 GVSPTATSY 708



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 210/454 (46%), Gaps = 4/454 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEG-GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           S T  + +   +G+ ++A  +   + E  G  P++  Y + + A     ++    S++ +
Sbjct: 146 SYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEIAVSLLRE 205

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + +  + PD I +N+ I A    G  E  +    +M   GLTP   TYN++I G G  G+
Sbjct: 206 MADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQ 265

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +E++ +L  MS +G + P   +YN+ +RA        EA  V+ +M + G+ PDV++Y+
Sbjct: 266 WKEALSVLTEMSAKG-LTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTPDVISYD 324

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
               A    G+ + + +++ EM   GV PN       I    K G+ ++A+   R +   
Sbjct: 325 AAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELLREVTAL 384

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ P+   FN  I    +        E+L  M   R+ PD I+Y++ + A    G  +  
Sbjct: 385 GLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMA 444

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            E+   M   G+ P+  + +I  +        ++  ELL  M   G  PNV+ + + I  
Sbjct: 445 LELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKT 504

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR-AEEILQIMKAFGVHP 491
               G  ++A+++  KM E  ++P+  T+ + +   S+ R  W+ A  +L+ M   G+ P
Sbjct: 505 CGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSK-RGRWKEAVALLREMPGQGLTP 563

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
              ++    +A    G  + A  +L ++  K  T
Sbjct: 564 DVISYTAAIDAYGKNGQWERAVELLRQMPTKGLT 597



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 203/444 (45%), Gaps = 3/444 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV-EENGMDPDSIF 144
           GK +EA  I + + EGG   +  +YTT +     Q ++     ++ ++ E+ G+ P+   
Sbjct: 124 GKWREALGILDEMKEGGVVCAH-SYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFC 182

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           +N+ I A       E A+    +M +  + P   +YN+ IK  G  G+ E  + LL  M 
Sbjct: 183 YNSAIEACGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMP 242

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
             G + P+  TYN ++     E    EA +V+ +M+A G+ P+ ++YN    A  ++G  
Sbjct: 243 SVG-LTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRW 301

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            +A EV+ +ME  GV P+  +    I      G+ + ++     M   GV PN + FN  
Sbjct: 302 KEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSA 361

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           I    +    +   E+L  +    + PD  ++++ + A + +G   +  E+  +M    +
Sbjct: 362 IVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRL 421

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           KPDA +Y+   +   +  + E A EL   M   G  PNV+     I      G     +E
Sbjct: 422 KPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLE 481

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           +  +M   G++PN+ T+ + +    +  Q  +A ++L  MK   + P   T+     A  
Sbjct: 482 LLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACS 541

Query: 505 ATGLTKEAKRILSKIKNKERTNEM 528
             G  KEA  +L ++  +  T ++
Sbjct: 542 KRGRWKEAVALLREMPGQGLTPDV 565



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 164/350 (46%), Gaps = 7/350 (2%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
             A +   + +G   EA+    +MKE G+     +Y T I   G  G+ E++++LL  + 
Sbjct: 113 LQAALREAATTGKWREALGILDEMKEGGVV-CAHSYTTAITTCGRQGQWEKALELLREIP 171

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITE-AWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            +  V PN+  YN  + A C   +  E A +++ +MA   + PD ++YN+   A  + G+
Sbjct: 172 EQEGVSPNVFCYNSAIEA-CGSGDQWEIAVSLLREMADREVVPDEISYNSAIKACGRGGQ 230

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            ++   ++ EM   G+ P+  T   +I+G  KEG+ KEAL     M   G+ P  + +N+
Sbjct: 231 WERVIGLLREMPSVGLTPDAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNM 290

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
            I+            EVL  M+   V PDVI+Y   + A    G  +   ++ D+M   G
Sbjct: 291 AIRACGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRG 350

Query: 384 IKPDAHAY--SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDR 441
           + P+   +  +I+A G  +  + EKA ELL  +   G  P+   F + I+     G    
Sbjct: 351 VAPNTIHFNSAIVACG--KGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKE 408

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           A+E+  +M    + P+  ++ + +    +  Q   A E+ + M   G+ P
Sbjct: 409 ALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTP 458



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 93/190 (48%), Gaps = 1/190 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S T  +++  + G+ + A  +   +   G  P+++TY +++ A      +     ++ 
Sbjct: 565 VISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLK 624

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++E  + PD + +N  I+A  + G  EEA+D   +M   GLTP   +Y + I+     G
Sbjct: 625 ELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEG 684

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E+++ LL+LM   G V P   +Y++ + A        EA  ++ +MA  G+    ++ 
Sbjct: 685 EWEKALGLLNLMGAHG-VSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNISN 743

Query: 252 NTIATAYAQN 261
           + I  A   +
Sbjct: 744 SLIVEALGDD 753


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/557 (22%), Positives = 245/557 (43%), Gaps = 106/557 (19%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++++ T L++SL++  + +++  +++ +  GG  P +  ++T++ A     R +    + 
Sbjct: 220 SLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLF 279

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S++E+ G+ P+ + +N +I+   +SG ++EA     KM +  ++P+  TY+  I G    
Sbjct: 280 SKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKL 339

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K +E+  +L  MS  G V PN   YN L+  +C   NI+EA  +   M + G+ P+ VT
Sbjct: 340 EKIDEANCVLKEMSELGFV-PNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVT 398

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNG-------------------------------- 278
            N++   + ++ +  QAE V+ EM   G                                
Sbjct: 399 LNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREML 458

Query: 279 ---VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE----- 330
              ++PN      ++SG CK GK  EA+     +   G  PN+V  N LI G  +     
Sbjct: 459 LRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQ 518

Query: 331 --------------IMDR-------------DGVDEVLALMKEFR---VNPDVITYSTIM 360
                         + DR               V E   L +E     + PD+ T++ ++
Sbjct: 519 ETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLL 578

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           +    A  +D+   ++ +  K G  P+ + Y ++  GY +  + E+ E LL  ++     
Sbjct: 579 HGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLE 638

Query: 421 PNVVIFTTIISGWCSDGSM-----------------------------------DRAIEV 445
            N V++ ++I  +C +G+M                                   D A  +
Sbjct: 639 LNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHL 698

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
            D+M + G+ PN+  + T++ GYS+  Q  +   +LQ M +  +HP K T+ ++ +    
Sbjct: 699 LDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCK 758

Query: 506 TGLTKEAKRILSKIKNK 522
            G TKEA ++L+++  K
Sbjct: 759 LGKTKEAAKLLNEMTEK 775



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/374 (27%), Positives = 184/374 (49%), Gaps = 4/374 (1%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           +P+    TTL++ L    +      +  ++   G  P+ +  NA+I+   ++GNM+E + 
Sbjct: 463 RPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLK 522

Query: 164 TFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
               M E GL     TYNTLI G    GK +E  +L + M ++G ++P++ T+N+L+   
Sbjct: 523 LLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKG-IQPDIYTFNLLLHGL 581

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           CN   I EA  + H+   +G  P+V TY  +   Y +  + ++ E ++ E+    ++ N 
Sbjct: 582 CNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNS 641

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
                +I  YC  G +  A R    MK  GV  +   ++ L+ G   I   D    +L  
Sbjct: 642 VVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDE 701

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M++  + P+V+ Y+TI+  +S  G M+K   +  +M    I P+   Y+I+  G+ +  +
Sbjct: 702 MRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGK 761

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            ++A +LL  M E G  P+ V +    +G C +G ++ A +V D+M    V  +  T+ T
Sbjct: 762 TKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTT 821

Query: 464 LMWGYSEARQPWRA 477
           L+ G     QP  A
Sbjct: 822 LIDG---CHQPSTA 832



 Score =  168 bits (426), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 120/471 (25%), Positives = 203/471 (43%), Gaps = 41/471 (8%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            +N LI+  K  EA  +   + E G  P+ V Y TL+         +    I   +   G
Sbjct: 332 FINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKG 391

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL------------------------ 173
           + P+S+  N++I  F +S  + +A +   +M   GL                        
Sbjct: 392 ISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTAL 451

Query: 174 -----------TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
                       P      TL+ G   AGK  E+V+L   +  +G V PN+ T N L+  
Sbjct: 452 HFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFV-PNIVTSNALIHG 510

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C   N+ E   ++  M   G+  D +TYNT+ +   + G+  +  E+  EM   G+QP+
Sbjct: 511 LCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPD 570

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T  +++ G C   KI EA R     K+ G  PN+  + ++I G+ +    +  + +L 
Sbjct: 571 IYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLN 630

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            +   ++  + + Y++++ A+   G M+    + DDM   G+      YS L  G     
Sbjct: 631 ELVSKKLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIG 690

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             + A+ LL  M + G  PNVV +TTII G+   G M++   V  +M  H + PN  T+ 
Sbjct: 691 LVDDAKHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYT 750

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            ++ G+ +  +   A ++L  M   G+ P   T+          GL KE K
Sbjct: 751 IMIDGFCKLGKTKEAAKLLNEMTEKGILPDAVTY-----NAFTNGLCKEGK 796



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 199/430 (46%), Gaps = 3/430 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF-NSIHSIMSQ 132
           ++  L+    +  +  +A+ +   +I  G   +  +++ ++  L ++ RF  ++H I   
Sbjct: 398 TLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREM 457

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +  N + P+      +++   ++G   EA++ + ++   G  P   T N LI G   AG 
Sbjct: 458 LLRN-LRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGN 516

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +E++KLL  M   G V   + TYN L+   C E  + E + +  +M   G++PD+ T+N
Sbjct: 517 MQETLKLLRDMLERGLVFDRI-TYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFN 575

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +        + D+A  +  E + NG  PN  T G++I GYCK  K++E       +   
Sbjct: 576 LLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSK 635

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
            +  N V++N LI+ +    + +    +   MK   V     TYS++M+     G +D  
Sbjct: 636 KLELNSVVYNSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDA 695

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
           K + D+M K G+ P+   Y+ +  GY +  +  K   +L  M     HPN   +T +I G
Sbjct: 696 KHLLDEMRKEGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDG 755

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
           +C  G    A ++ ++M E G+ P+  T+     G  +  +   A ++   M +  V   
Sbjct: 756 FCKLGKTKEAAKLLNEMTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLD 815

Query: 493 KSTFLLLAEA 502
           + T+  L + 
Sbjct: 816 EITYTTLIDG 825



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 210/437 (48%), Gaps = 9/437 (2%)

Query: 91  AQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVIN 150
           A  +F+ L + G  PSL T T LL++L         + +   +   G+ PD   F+ +IN
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 151 AFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
           AF +    ++A+  F KM++ G+ P   TYN +I G   +G+ +E+ +  + M +E  V 
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKE-KVS 323

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P+L TY+V +      + I EA  V+ +M+  G  P+ V YNT+   Y + G   +A ++
Sbjct: 324 PSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKI 383

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL----VIFNLLIK 326
             +M   G+ PN  T   +I G+CK  +I +A      M   G+  N     ++ N L  
Sbjct: 384 RDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCL 443

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
            F  +     + E+  L++  R N  ++T  T+++    AG   +  E++  +   G  P
Sbjct: 444 KFRFVTALHFIREM--LLRNLRPNDGLLT--TLVSGLCKAGKQGEAVELWCRLLGKGFVP 499

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
           +    + L  G  +    ++  +LL  M+E G   + + + T+ISG C +G +    E+ 
Sbjct: 500 NIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELK 559

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
           ++M + G+ P++ TF  L+ G   A +   A  +    K  G  P   T+ ++ +     
Sbjct: 560 EEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKA 619

Query: 507 GLTKEAKRILSKIKNKE 523
              +E + +L+++ +K+
Sbjct: 620 NKVEEGENLLNELVSKK 636



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 176/399 (44%), Gaps = 3/399 (0%)

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F     + S + + G+ P       ++++  ++  ++++ + +  +   G+ P    ++T
Sbjct: 202 FGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFST 261

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I  +    + ++++ L   M + G V PN+ TYN ++   C    + EA+    KM   
Sbjct: 262 MINAFCKGHREDDAIGLFSKMEKLG-VAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKE 320

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            + P ++TY+       +  + D+A  V+ EM   G  PN      +I GYCK G I EA
Sbjct: 321 KVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEA 380

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L+    M   G+ PN V  N LI+GF +       + VL  M    +  +  ++S ++N 
Sbjct: 381 LKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVIN- 439

Query: 363 WSTAGF-MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
           W    F          +M    ++P+    + L  G  +  +  +A EL   ++  GF P
Sbjct: 440 WLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVP 499

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           N+V    +I G C  G+M   +++   M E G+  +  T+ TL+ G  +  +     E+ 
Sbjct: 500 NIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELK 559

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           + M   G+ P   TF LL           EA R+  + K
Sbjct: 560 EEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECK 598



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/371 (25%), Positives = 166/371 (44%), Gaps = 44/371 (11%)

Query: 179 TYNTLIK--GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
            Y+T  K  G+G A        +  L++++G + P+L+T   L+ +      + +++ V 
Sbjct: 192 VYSTQFKHLGFGFAAD------VFSLLAKKG-LFPSLKTCTFLLSSLVKANELKKSYEVY 244

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
             +   G+ PDV  ++T+  A+ +    D A  +  +ME  GV PN  T   II G CK 
Sbjct: 245 DFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKS 304

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
           G++ EA RF   M +  V P+L+ +++ I G +++   D  + VL  M E    P+ + Y
Sbjct: 305 GRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVY 364

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           +T+++ +   G + +  +I DDM   GI P++   + L +G+ +  +  +AE +L  MI 
Sbjct: 365 NTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIG 424

Query: 417 SG-----------------------------------FHPNVVIFTTIISGWCSDGSMDR 441
            G                                     PN  + TT++SG C  G    
Sbjct: 425 RGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGE 484

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A+E++ ++   G  PN+ T   L+ G  +A       ++L+ M   G+   + T+  L  
Sbjct: 485 AVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLIS 544

Query: 502 ARRATGLTKEA 512
                G  KE 
Sbjct: 545 GCCKEGKVKEG 555



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 49/193 (25%), Positives = 89/193 (46%), Gaps = 5/193 (2%)

Query: 80  NSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           NSLI      G    A  + +++   G   S  TY++L+  L      +    ++ ++ +
Sbjct: 645 NSLIRAYCINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRK 704

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+ P+ + +  +I  +S+ G M +      +M    + P   TY  +I G+   GK +E
Sbjct: 705 EGLLPNVVCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKE 764

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + KLL+ M+ +G + P+  TYN      C E  + EA+ V  +M++  +  D +TY T+ 
Sbjct: 765 AAKLLNEMTEKG-ILPDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLI 823

Query: 256 TAYAQNGEADQAE 268
               Q   A   E
Sbjct: 824 DGCHQPSTATNQE 836


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 217/483 (44%), Gaps = 39/483 (8%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T LM+ L + G    A+ +F  L+E    P+ VTY+ L+         N    ++ ++EE
Sbjct: 196 TALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEE 255

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY------GI 189
             + P+ I ++++++ +++ G + EAMD   KM +  + P    Y TLI GY      GI
Sbjct: 256 KHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGI 315

Query: 190 A-----------------------------GKPEESVKLL-DLMSREGNVKPNLRTYNVL 219
           A                             G+ EE+ +L  D+MSR   + P+   Y  +
Sbjct: 316 ALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSR--GLLPDRVNYTSM 373

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGV 279
           +  +      ++A+N+  +M       DVV YN +     + G+  ++E     M   G+
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKY-ESESFHTGMRQLGL 432

Query: 280 QPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
            P+  T   +I+ YCKEG +  AL+    MK YG+ PN +  N+L++      + +   +
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMD 492

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           +L  M     +P   T+  +++A S +   D      D +   G+K D   Y+ L   + 
Sbjct: 493 LLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFC 552

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           R     +A  +   M+  G   +++ +  +I G+C    + +A  V  +M   GVSPN++
Sbjct: 553 RLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVE 612

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           T+  L+ G S AR    A  ++  MK  G+ P  +T+ +L       G  KE  ++  ++
Sbjct: 613 TYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEM 672

Query: 520 KNK 522
             K
Sbjct: 673 ITK 675



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 124/521 (23%), Positives = 229/521 (43%), Gaps = 72/521 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +MN L + GK +EA+++F  + E G  P+  +Y TL+ +L  +        +  
Sbjct: 122 VVTYTCIMNGLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQG 181

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++   G+  D + + A+++   ++G    A D F  + E  L P   TY+ LI G+   G
Sbjct: 182 RMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLG 241

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              +   LL  M  E ++ PN+  Y+ +V  +  +  + EA +VM KM    + P+V  Y
Sbjct: 242 DVNKGELLLQEM-EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVY 300

Query: 252 NTIATAY-----------------------------------AQNGEADQAEEVIVEMEH 276
            T+   Y                                    ++G  ++A+E+  +M  
Sbjct: 301 GTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMS 360

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G+ P+      ++ G+ K GK  +A   A+ M E     ++V +N+LI G  ++   + 
Sbjct: 361 RGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYES 420

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
            +     M++  + PD  T++T++NA+   G +    ++ ++M   G+KP++   +IL +
Sbjct: 421 -ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQ 479

Query: 397 GYVREQEPEKAEELLMTMIESGFHP------------------NVVI------------- 425
                 E EK  +LL  M+  GFHP                  +V++             
Sbjct: 480 RLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKL 539

Query: 426 ----FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
               + T+IS +C  G + RA  VF  M   G+  ++ T+  L+ GY  +    +A  + 
Sbjct: 540 DLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVH 599

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
             M   GV P   T+ +L     A  L KEA  +++++K +
Sbjct: 600 SQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKER 640



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 176/378 (46%), Gaps = 36/378 (9%)

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           FN +I+ +  +G +  A++    MK  G  P   TYNTL+ G+   G    + KL+  +S
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
              N++PN+ TY  L+ A+C  + + +A  +  +M    + PDVVTY  I     ++G+ 
Sbjct: 80  LV-NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKV 138

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           ++A+ V  EME  GV PN  +   +I    KEG + EA      M   G+          
Sbjct: 139 EEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGI---------- 188

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
             GF                       DV+ Y+ +M+    AG  +  +++F  + +  +
Sbjct: 189 --GF-----------------------DVVVYTALMDGLFKAGMANNAEDMFQVLLEESL 223

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
            P+   YS L  G+ +  +  K E LL  M E    PNV+++++I+ G+   G ++ A++
Sbjct: 224 VPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMD 283

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
           V  KM +  + PN+  + TL+ GY +A Q   A ++ + MK+ G+              +
Sbjct: 284 VMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLK 343

Query: 505 ATGLTKEAKRILSKIKNK 522
            +G  +EA  +   + ++
Sbjct: 344 RSGRMEEADELFKDMMSR 361



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/452 (22%), Positives = 208/452 (46%), Gaps = 2/452 (0%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           R+V     L++     G+   A  +   +   G  P +VTY TL+          +   +
Sbjct: 15  RSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKL 74

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           M ++    ++P+ I +  +I+A+ +S  +E+A+  + +M    L P   TY  ++ G   
Sbjct: 75  MGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCK 134

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           +GK EE+  +   M   G V PN  +Y  L+ +   E N+ EA+ +  +M   G+  DVV
Sbjct: 135 SGKVEEAKSVFREMEEVG-VVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVV 193

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            Y  +     + G A+ AE++   +    + PN  T   +I G+CK G + +     + M
Sbjct: 194 VYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEM 253

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
           +E  + PN+++++ ++ G+ +    +   +V+  M +  + P+V  Y T+++ +  A   
Sbjct: 254 EEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQR 313

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
               ++F +M   G++ +            R    E+A+EL   M+  G  P+ V +T++
Sbjct: 314 GIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSM 373

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           + G+   G    A  +  +M E     ++  +  L+ G  +  + + +E     M+  G+
Sbjct: 374 MDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGK-YESESFHTGMRQLGL 432

Query: 490 HPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            P  +TF  +  A    G    A ++L+++K+
Sbjct: 433 APDSATFNTMINAYCKEGNLGNALKLLNEMKS 464



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/442 (24%), Positives = 205/442 (46%), Gaps = 14/442 (3%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+++  +    ++A  +++ +      P +VTYT ++  L    +     S+  
Sbjct: 87  VITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEAKSVFR 146

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++EE G+ P+   +  +I++  + GN+ EA     +M   G+      Y  L+ G   AG
Sbjct: 147 EMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAG 206

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               +  +  ++  E  V PN  TY+ L+   C   ++ +   ++ +M    + P+V+ Y
Sbjct: 207 MANNAEDMFQVLLEESLV-PNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVY 265

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           ++I   Y + G  ++A +V+ +M    + PN    G +I GY K  +   AL   + MK 
Sbjct: 266 SSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKS 325

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDG----VDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            G+  N    N +I  FV  + R G     DE+   M    + PD + Y+++M+ +  AG
Sbjct: 326 RGLEEN----NFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAG 381

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
                  I  +M +     D  AY++L  G  +  + E +E     M + G  P+   F 
Sbjct: 382 KESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYE-SESFHTGMRQLGLAPDSATFN 440

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T+I+ +C +G++  A+++ ++M  +G+ PN  T   L+     A +  +  ++L  M   
Sbjct: 441 TMINAYCKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVM 500

Query: 488 GVHPQKSTFLLLAEA----RRA 505
           G HP  +T   + +A    RRA
Sbjct: 501 GFHPTPTTHKAVLDASSKSRRA 522



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 57/236 (24%), Positives = 117/236 (49%)

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           ++I GYC+ G+I  A+     MK  G  P++V +N L+ GF +I D     +++  +   
Sbjct: 22  VLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEISLV 81

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKA 407
            + P+VITY+T+++A+  +  ++    ++D+M    + PD   Y+ +  G  +  + E+A
Sbjct: 82  NLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVEEA 141

Query: 408 EELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           + +   M E G  PN   + T+I     +G++  A  +  +M   G+  ++  +  LM G
Sbjct: 142 KSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDG 201

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
             +A     AE++ Q++    + P   T+  L +     G   + + +L +++ K 
Sbjct: 202 LFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKH 257



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 63/239 (26%), Positives = 109/239 (45%), Gaps = 13/239 (5%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+++    G  + A  +F +++  G    ++TY  L+    I        ++ SQ+   G
Sbjct: 547 LISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEG 606

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   +N ++   S +  ++EA     +MKE GL P  +TY+ L+ G+G  G  +E V
Sbjct: 607 VSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECV 666

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL   M  +G V P  RTYNVL+  +   K +++A  +M +M   G+ P+  TY+ +   
Sbjct: 667 KLYCEMITKGFV-PKTRTYNVLISCFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICG 725

Query: 258 Y------------AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           +             +     +A+ +  EM   G  P   T   I     K GK  +A R
Sbjct: 726 WYKLSKQPELNKSLKRSYQAEAKRLFEEMNEKGFIPCENTLACISFTLAKPGKKADAQR 784


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 191/394 (48%), Gaps = 1/394 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +L+ERG  ++A+A+   +   G  P++VTY  ++  L   ++  +     +++   G
Sbjct: 314 LITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMG 373

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD I +N+++N + ++GN++EA+     ++ +GL PT  TYNTLI GY   G   E+ 
Sbjct: 374 LLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEAR 433

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L + M  +G   P++ TY +L+      +N+  A     +M + G++PD   YNT   A
Sbjct: 434 RLKEEMVEQGCF-PDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICA 492

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                    A ++   M   G+ P+  T  +II G CK G +K+A R    M   G+ P+
Sbjct: 493 ELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPD 552

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            + +  LI    E        ++L  M    + P V+TY+ +++     G +      F 
Sbjct: 553 CITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFR 612

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M   GI+P+   Y++L            A      M+E G  PN   +T +I G C +G
Sbjct: 613 KMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREG 672

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
           +   AI ++ +M ++G+ P+  T   L  G+ E 
Sbjct: 673 NWADAIRLYFEMHQNGIPPDYCTHNALFKGFDEG 706



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 117/482 (24%), Positives = 215/482 (44%), Gaps = 41/482 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           VR   +++  L +  +  + +A++  +++   +P++VTY TLL +   + R +    ++ 
Sbjct: 202 VRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEASMLLK 261

Query: 132 QVEENG--MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           ++E  G     + + FN VI+  +  G++E A+     M+ S    ++ TYN LI     
Sbjct: 262 EMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-KASSFTYNPLITALLE 320

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G   ++  L   M  EG + P + TYN ++      +    A     +M A G+ PDV+
Sbjct: 321 RGFVRKAEALQMEMENEG-IMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVI 379

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN++   Y + G   +A  ++ ++   G+ P   T   +I GYC+ G + EA R    M
Sbjct: 380 TYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEM 439

Query: 310 KEYGVHPNLVIFNLLIKGFVEI----MDRDGVDEVLA----------------------- 342
            E G  P++  + +L+ G  ++    M R+  DE+L+                       
Sbjct: 440 VEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSST 499

Query: 343 --------LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
                   +M    + PD +TY+ I++     G +   K +   M   G++PD   Y+ L
Sbjct: 500 PMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCL 559

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
              +       +A +LL  M+  G  P+VV +T ++   C  G++  A   F KM + G+
Sbjct: 560 IHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGI 619

Query: 455 SPNLKTFETLMWGYS-EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            PN  T+  L+       R P       ++++  G+ P K T+ LL +     G   +A 
Sbjct: 620 EPNEITYNVLIHALCMTGRTPLAFRHFHEMLER-GLAPNKYTYTLLIDGNCREGNWADAI 678

Query: 514 RI 515
           R+
Sbjct: 679 RL 680



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 189/411 (45%), Gaps = 4/411 (0%)

Query: 93  AIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAF 152
           A F  +   G  P +     +L  L    R++ + ++  ++ +  ++P  + +N ++++F
Sbjct: 188 AAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSF 247

Query: 153 SESGNMEEAMDTFWKMKE--SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVK 210
            + G  +EA     +M+    G +    T+N +I      G  E +VKL+D M      K
Sbjct: 248 LKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK--K 305

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
            +  TYN L+ A      + +A  +  +M   G+ P VVTYN I     +  +A+ A+  
Sbjct: 306 ASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVK 365

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             EM   G+ P+  T   +++ YCK G +KEAL     ++  G+ P ++ +N LI G+  
Sbjct: 366 FAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCR 425

Query: 331 IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
           + D      +   M E    PDV TY+ +MN       +   +E FD+M   G++PD  A
Sbjct: 426 LGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFA 485

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC 450
           Y+      +       A +L   M+  G +P+ V +  II G C  G++  A  +  KM 
Sbjct: 486 YNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMV 545

Query: 451 EHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
             G+ P+  T+  L+  + E      A ++L  M + G+ P   T+ +L  
Sbjct: 546 SDGLQPDCITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVH 596



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 99/390 (25%), Positives = 187/390 (47%), Gaps = 10/390 (2%)

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           V  +G+ PD    N V+    ++   ++    + +M +  + PT  TYNTL+  +   G+
Sbjct: 193 VTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGR 252

Query: 193 PEESVKLLDLM-SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
            +E+  LL  M ++ G    N  T+NV++     E ++  A  ++  M  S  K    TY
Sbjct: 253 KDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-KASSFTY 311

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA-LRFARTMK 310
           N + TA  + G   +AE + +EME+ G+ P   T   II G  K  + + A ++FA  M+
Sbjct: 312 NPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAE-MR 370

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAG 367
             G+ P+++ +N L+  + +      + E L L+ + R   + P V+TY+T+++ +   G
Sbjct: 371 AMGLLPDVITYNSLLNRYCKA---GNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLG 427

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            + + + + ++M + G  PD   Y+IL  G  + +    A E    M+  G  P+   + 
Sbjct: 428 DLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYN 487

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
           T I    +  S   A ++ + M   G+ P+  T+  ++ G  +      A+ +   M + 
Sbjct: 488 TRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSD 547

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           G+ P   T+  L  A    GL +EA+++L+
Sbjct: 548 GLQPDCITYTCLIHAHCERGLLREARKLLN 577



 Score =  125 bits (315), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 76/259 (29%), Positives = 122/259 (47%), Gaps = 1/259 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T LMN   +      A+  F+ ++  G +P    Y T + A            +  
Sbjct: 448 VCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTPMAFQLRE 507

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G+ PD++ +N +I+   ++GN+++A     KM   GL P   TY  LI  +   G
Sbjct: 508 VMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLIHAHCERG 567

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E+ KLL+ M  +G ++P++ TY +LV   C   N+  A+    KM   G++P+ +TY
Sbjct: 568 LLREARKLLNGMVSDG-LQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITY 626

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  A    G    A     EM   G+ PN  T  ++I G C+EG   +A+R    M +
Sbjct: 627 NVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQ 686

Query: 312 YGVHPNLVIFNLLIKGFVE 330
            G+ P+    N L KGF E
Sbjct: 687 NGIPPDYCTHNALFKGFDE 705



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/316 (21%), Positives = 134/316 (42%), Gaps = 38/316 (12%)

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           V P++R  N ++R   +     +   V  +M    ++P +VTYNT+  ++ + G  D+A 
Sbjct: 198 VAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEAS 257

Query: 269 EVIVEMEHNG--VQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIK 326
            ++ EME  G     N  T  ++IS   +EG ++ A++   +M+                
Sbjct: 258 MLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMR---------------- 301

Query: 327 GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKP 386
                           L K+        TY+ ++ A    GF+ K + +  +M   GI P
Sbjct: 302 ----------------LSKK----ASSFTYNPLITALLERGFVRKAEALQMEMENEGIMP 341

Query: 387 DAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVF 446
               Y+ +  G ++ ++ E A+     M   G  P+V+ + ++++ +C  G++  A+ + 
Sbjct: 342 TVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLL 401

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
             +   G++P + T+ TL+ GY        A  + + M   G  P   T+ +L    R  
Sbjct: 402 GDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKV 461

Query: 507 GLTKEAKRILSKIKNK 522
                A+    ++ +K
Sbjct: 462 RNLAMAREFFDEMLSK 477



 Score = 60.5 bits (145), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 62/121 (51%), Gaps = 8/121 (6%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR----FNSI 126
           +V + T L+++   RG    A   F  +++ G +P+ +TY  L+ AL +  R    F   
Sbjct: 587 SVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHF 646

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
           H ++    E G+ P+   +  +I+     GN  +A+  +++M ++G+ P   T+N L KG
Sbjct: 647 HEML----ERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPPDYCTHNALFKG 702

Query: 187 Y 187
           +
Sbjct: 703 F 703


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 200/410 (48%), Gaps = 20/410 (4%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L++ L++ G       ++ +L+  G  P+LVT+  L+       +       + 
Sbjct: 27  VHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFLR 86

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++E  + PD   FN +I+   + GN ++A+  F  M+ S + P   TYNT+I G   +G
Sbjct: 87  ALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSG 146

Query: 192 KPEESVKLL-DLMSREGNVKPNLRTYNVLVRA-WCNEKNITEAWNVMHKMAASGMKPDVV 249
             E++ +LL +++ R G   P++ TYN L+ A  C + ++ EA  ++  M  +G  PDV+
Sbjct: 147 NLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVI 206

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN+I  A    G   +A E++  M      P+  T   ++ G+CK G +  AL     M
Sbjct: 207 TYNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEM 263

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTA 366
               + P+++ + +L+ G   +     V     L++E       PDVI Y+++++    +
Sbjct: 264 CRENILPDVITYTILVNGLCRV---GQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKS 320

Query: 367 GFMDK---------CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           G +++          +EI  +M    + P    Y+I+  G +++    KA  L+  ++  
Sbjct: 321 GEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVAR 380

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           G+ P+VV + T+I G C    +  A ++ D+M   G  PN  T  ++++G
Sbjct: 381 GYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFG 430



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 189/409 (46%), Gaps = 16/409 (3%)

Query: 100 EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNME 159
           + G+K  + +Y  LL  L           +   +  +G  P+ + F  +I    ++G   
Sbjct: 20  QDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAT 79

Query: 160 EAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVL 219
            A++    + E  + P    +N LI G    G P+++VKL + M     V P++ TYN +
Sbjct: 80  RALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENM-ESSRVNPDIFTYNTV 138

Query: 220 VRAWCNEKNITEAWNVMHKMAASGMK--PDVVTYNTIATA-YAQNGEADQAEEVIVEMEH 276
           +   C   N+ +A  ++ +M   G K  PD+VTYNT+  A   ++G+ ++A E++  M+ 
Sbjct: 139 ISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKL 198

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
            G  P+  T   II   C  G++ EA    +TM      P+LV FN L+ GF +      
Sbjct: 199 AGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTFNTLLDGFCKAGMLPR 255

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
             EVL  M    + PDVITY+ ++N     G +     + +++ + G  PD  AY+ L  
Sbjct: 256 ALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVD 315

Query: 397 GYVREQEPEKAE---------ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
           G  +  E E+A          E+L  M+     P +  +  ++ G   DGS+ +A+ +  
Sbjct: 316 GLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLIS 375

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            +   G  P++ T+ TL+ G  +A +   A ++   M + G  P   T 
Sbjct: 376 DLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTL 424



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/391 (25%), Positives = 193/391 (49%), Gaps = 16/391 (4%)

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E++G   D   +N +++   +SG+       +  +  SG +P   T+  LI+G   AG+ 
Sbjct: 19  EQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQA 78

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +++ L  +  E +V P++  +N L+     + N  +A  +   M +S + PD+ TYNT
Sbjct: 79  TRALEFLRALD-EFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNT 137

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQ--PNGRTCGIII-SGYCKEGKIKEALRFARTMK 310
           + +   ++G  ++A E++ EM   G +  P+  T   +I +G CK+G ++EAL     MK
Sbjct: 138 VISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMK 197

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  P+++ +N +I     +  R  V E   ++K    +PD++T++T+++ +  AG + 
Sbjct: 198 LAGPAPDVITYNSIIHALC-VAGR--VVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLP 254

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +  E+ ++M +  I PD   Y+IL  G  R  + + A  LL  ++  G+ P+V+ +T+++
Sbjct: 255 RALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLV 314

Query: 431 SGWCSDGSMDR---------AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
            G C  G ++          A E+  +M    + P L T+  ++ G  +     +A  ++
Sbjct: 315 DGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLI 374

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
             + A G  P   T+  L +        +EA
Sbjct: 375 SDLVARGYVPDVVTYNTLIDGLCKANRVREA 405



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 88/280 (31%), Positives = 148/280 (52%), Gaps = 6/280 (2%)

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G K DV +YN +     ++G   +  +V  ++ H+G  PN  T  I+I G CK G+   A
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
           L F R + E+ V P++ IFN LI G  +  + D   ++   M+  RVNPD+ TY+T+++ 
Sbjct: 82  LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141

Query: 363 WSTAGFMDKCKEIFDDMGKAGIK--PDAHAY-SILAKGYVREQEPEKAEELLMTMIESGF 419
              +G ++K +E+ ++M + G K  PD   Y +++  G  ++ + E+A E+L  M  +G 
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEE 479
            P+V+ + +II   C  G +  A E+   M     SP+L TF TL+ G+ +A    RA E
Sbjct: 202 APDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALE 258

Query: 480 ILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +L+ M    + P   T+ +L       G  + A  +L +I
Sbjct: 259 VLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEI 298



 Score =  135 bits (339), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 94/421 (22%), Positives = 175/421 (41%), Gaps = 37/421 (8%)

Query: 35  KKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRT--VRSMTKLMNSLIERG------ 86
           K  NP +  +L+ N + +   P       +    C++  +    +L+  +I RG      
Sbjct: 109 KDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPD 168

Query: 87  ----------------KPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
                             +EA  I + +   G  P ++TY +++ AL +  R      I+
Sbjct: 169 IVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEIL 228

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +      PD + FN +++ F ++G +  A++   +M    + P   TY  L+ G    
Sbjct: 229 KTMS---CSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRV 285

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-------- 242
           G+ + +  LL+ + R+G + P++  Y  LV   C    I EA  ++ +M+A         
Sbjct: 286 GQVQVAFYLLEEIVRQGYI-PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVS 344

Query: 243 -GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
             M P + TYN +     ++G   +A  +I ++   G  P+  T   +I G CK  +++E
Sbjct: 345 INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVRE 404

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A   A  M   G  PN V    ++ G   +   D    ++  M   R  P+V+ Y+++++
Sbjct: 405 ACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLID 464

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
               +  MD    + D M   G+  D  AY  L    +      +A  +   M+  GF P
Sbjct: 465 GLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLP 524

Query: 422 N 422
           +
Sbjct: 525 D 525



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 167/349 (47%), Gaps = 6/349 (1%)

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           + +P+ +++  D    +   K ++ +YN L+       +      V   +  SG  P++V
Sbjct: 4   SSRPDLAIQFFDWAGEQDGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLV 63

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           T+  +     + G+A +A E +  ++   V P+      +I G  K+G   +A++    M
Sbjct: 64  TFKILIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENM 123

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM--KEFRVNPDVITYSTIMNA-WSTA 366
           +   V+P++  +N +I G  +  + +   E+L  M  +  +  PD++TY+T++NA     
Sbjct: 124 ESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKD 183

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G +++  EI D M  AG  PD   Y+ +           +A E+L TM  S   P++V F
Sbjct: 184 GDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMSCS---PDLVTF 240

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            T++ G+C  G + RA+EV ++MC   + P++ T+  L+ G     Q   A  +L+ +  
Sbjct: 241 NTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVR 300

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIP 535
            G  P    +  L +    +G  +EA +++ ++  +E   EM +   +P
Sbjct: 301 QGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVP 349


>gi|296083087|emb|CBI22491.3| unnamed protein product [Vitis vinifera]
          Length = 548

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 193/416 (46%), Gaps = 9/416 (2%)

Query: 85  RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIF 144
           R  P +A  + N ++E G KP + TYTTLL+      +  +   I  ++   G  P+   
Sbjct: 82  RLSPPDALELKNQMVEKGIKPDVFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICT 141

Query: 145 FNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMS 204
           FNA+I      G   E M  F  +K    +P   T+NTL+  +G  G   E   +   M 
Sbjct: 142 FNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMK 201

Query: 205 REGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEA 264
           R G V P   T+N L+ ++    +  +A  V  +M  +G+ PD+ +YN +  A A+ G  
Sbjct: 202 RAGFV-PERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNAVLAALARGGLW 260

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
            Q+E+V+ EM+    +PN  T   ++  Y    +I+     A  +    + P  V    L
Sbjct: 261 KQSEKVLAEMKDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSGIIEPRAV----L 316

Query: 325 IKGFVEIMDR-DGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           +K  V +  + D + E      E R    +PD+ T + +++ +     + K  EI D M 
Sbjct: 317 LKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKANEILDCMK 376

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
           + G  P    Y+ L   Y R    E++EE+L  ++  G  P+++ + T+I  +C +G M 
Sbjct: 377 RGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYAYCRNGRMR 436

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            A  V  +M E G +P++ T+ T +  Y+       A +++  M   G  P +ST+
Sbjct: 437 DASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPNQSTY 492



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/419 (23%), Positives = 194/419 (46%), Gaps = 1/419 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++   + GK + A  IF  +   G KP++ T+  L+     + +F  +  +  
Sbjct: 104 VFTYTTLLSGFEKAGKDKAAVQIFEEMRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFE 163

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            ++     PD + +N +++ F ++G   E    F +MK +G  P   T+NTLI  Y   G
Sbjct: 164 DIKTFQCSPDIVTWNTLLSVFGQNGMDSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCG 223

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++++ +   M  E  V P+L +YN ++ A        ++  V+ +M     KP+ +TY
Sbjct: 224 SFDQAMAVYKRM-LEAGVNPDLSSYNAVLAALARGGLWKQSEKVLAEMKDGRCKPNELTY 282

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            ++  AYA   E ++   +  E+    ++P       ++    K   + E  R    +++
Sbjct: 283 CSLLHAYANGKEIERMCALAEEIYSGIIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQ 342

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G  P++   N ++  +         +E+L  MK     P + TY+++M  +S +   ++
Sbjct: 343 RGFSPDITTLNAMVSIYGRRQMVAKANEILDCMKRGGFTPSLTTYNSLMYMYSRSANFER 402

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            +EI  ++   GI+PD  +Y+ +   Y R      A  +L  M ESG  P+++ + T I+
Sbjct: 403 SEEILREILAKGIRPDIISYNTVIYAYCRNGRMRDASRVLSEMRESGPAPDIITYNTFIA 462

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
            + +D     AI+V   M +HG  PN  T+ +++  Y +  +   A   +  ++    H
Sbjct: 463 SYAADSMFVEAIDVVCYMIKHGCKPNQSTYNSIVDWYCKLNRRDEASMFVNNLRKLDPH 521



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/380 (23%), Positives = 178/380 (46%), Gaps = 2/380 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  E C+  + +   L+     RGK  E   +F ++      P +VT+ TLL+       
Sbjct: 130 MRNEGCKPNICTFNALIKMHGNRGKFTEMMKVFEDIKTFQCSPDIVTWNTLLSVFGQNGM 189

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
            + +  +  +++  G  P+   FN +I+++S  G+ ++AM  + +M E+G+ P  S+YN 
Sbjct: 190 DSEVSGVFKEMKRAGFVPERDTFNTLISSYSRCGSFDQAMAVYKRMLEAGVNPDLSSYNA 249

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           ++      G  ++S K+L  M ++G  KPN  TY  L+ A+ N K I     +  ++ + 
Sbjct: 250 VLAALARGGLWKQSEKVLAEM-KDGRCKPNELTYCSLLHAYANGKEIERMCALAEEIYSG 308

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
            ++P  V   T+    ++     + E   +E+   G  P+  T   ++S Y +   + +A
Sbjct: 309 IIEPRAVLLKTLVLVNSKCDLLMETERAFLELRQRGFSPDITTLNAMVSIYGRRQMVAKA 368

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNA 362
                 MK  G  P+L  +N L+  +    + +  +E+L  +    + PD+I+Y+T++ A
Sbjct: 369 NEILDCMKRGGFTPSLTTYNSLMYMYSRSANFERSEEILREILAKGIRPDIISYNTVIYA 428

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
           +   G M     +  +M ++G  PD   Y+     Y  +    +A +++  MI+ G  PN
Sbjct: 429 YCRNGRMRDASRVLSEMRESGPAPDIITYNTFIASYAADSMFVEAIDVVCYMIKHGCKPN 488

Query: 423 VVIFTTIISGWCSDGSMDRA 442
              + +I+  +C     D A
Sbjct: 489 QSTYNSIVDWYCKLNRRDEA 508


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 133/554 (24%), Positives = 240/554 (43%), Gaps = 54/554 (9%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T++++ L E    +EA    + +      P++VTY  LL     +++      I+S +  
Sbjct: 303 TQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMIT 362

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE- 194
            G  P    FN++I+A+  SG+   A     KM + G  P    YN LI   GI G  + 
Sbjct: 363 EGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIG--GICGNEKL 420

Query: 195 ESVKLLDLMSR------EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            S+ +L+L  +      + +V  N    + L R  C      +A++++ +M + G  PD 
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TY+ +        + D A  +  EM+ N V P+  T  I+I  +CK G +++A ++   
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M   G  PN+V +  LI  +++       +E+  +M      P+V+TY+ +++    +G 
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 369 MDKCKEIFDDM-GKAGI---------------KPDAHAYSILAKGYVREQEPEKAEELLM 412
           ++K  +I+  M G A I                P+   Y  L  G  +  + ++A +LL 
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M   G  PN +++  +I G+C  G +D A  VF KM E G  PN+ T+ +L+    + +
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
           +   A ++L  M      P    +  + +     G T EA R++S ++ K          
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEK---------- 770

Query: 533 DIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWF 592
                              +PN++    ++  D  G A  + K   L+R   +      F
Sbjct: 771 -----------------GCHPNVVTYTAMI--DGFGKAGKVDKCLELMRQMGAKGCAPNF 811

Query: 593 ATTSMYLSHSCKSG 606
            T  + ++H C +G
Sbjct: 812 VTYRVLINHCCAAG 825



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 219/487 (44%), Gaps = 63/487 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++S  + G  Q+A+  F+ ++  G  P++VTYT L+ A    ++ +S + +  
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEA---------------MDTFWKMKESGL-TP 175
            +   G  P+ + + A+I+   +SG +E+A               +D ++K+ +  +  P
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
              TY  L+ G   A K +E+  LLD+MS EG  +PN   Y+ L+  +C    + EA  V
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEG-CEPNHIVYDALIDGFCKVGKLDEAQMV 693

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
             KM+  G  P+V TY+++     ++   D A +V+  M  N   PN      +I G CK
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PD 352
            GK  EA R    M+E G HPN+V +  +I GF +      VD+ L LM++       P+
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGK---AGKVDKCLELMRQMGAKGCAPN 810

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGK-------AGIK-------------------- 385
            +TY  ++N    AG +D   ++ D+M +       AG +                    
Sbjct: 811 FVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEI 870

Query: 386 ------PDAHAYSILAKGYVREQEPEKAEELL--MTMIESGFHPNVVIFTTIISGWCSDG 437
                 P   AY IL   + +    E A EL   M+   S    +  +++++I       
Sbjct: 871 AENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLAS 930

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG--VHPQKST 495
            +D+A E++  M + G  P L  F  L+ G        R EE LQ+       VH   S+
Sbjct: 931 KVDKAFELYADMIKRGGIPELSIFFYLVKGLIRIN---RWEEALQLSDCICQMVHVSNSS 987

Query: 496 FLLLAEA 502
            L+L  A
Sbjct: 988 SLILKHA 994



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 217/483 (44%), Gaps = 30/483 (6%)

Query: 64  MNKESCRTVRSMTKLMNSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           M  E C   R   ++ NSLI      G    A  +   + + G +P  V Y  L+  +  
Sbjct: 360 MITEGCYPSR---RIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICG 416

Query: 120 QKRFNSIHSI-MSQVEENGMDPDSIFFNAV-----INAFSESGNMEEAMDTFWKMKESGL 173
            ++  S+  + +++     M    +  N V           +G  E+A     +M   G 
Sbjct: 417 NEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGF 476

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
            P TSTY+ +I     A K + +  L + M +  +V P++ TY +L+ ++C    + +A 
Sbjct: 477 IPDTSTYSKVIGLLCNASKVDNAFLLFEEM-KSNHVVPDVFTYTILIDSFCKVGLLQQAR 535

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
               +M   G  P+VVTY  +  AY +  +   A E+   M   G  PN  T   +I G+
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595

Query: 294 CKEGKIKEALR-FARTMKEYGV---------------HPNLVIFNLLIKGFVEIMDRDGV 337
           CK G+I++A + +AR      +                PN+  +  L+ G  +       
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            ++L +M      P+ I Y  +++ +   G +D+ + +F  M + G  P+ + YS L   
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             +++  + A ++L  M+E+   PNV+I+T +I G C  G  D A  +   M E G  PN
Sbjct: 716 LFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPN 775

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + T+  ++ G+ +A +  +  E+++ M A G  P   T+ +L     A GL  +A ++L 
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835

Query: 518 KIK 520
           ++K
Sbjct: 836 EMK 838



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 212/506 (41%), Gaps = 59/506 (11%)

Query: 75  MTKLMNSLIER----GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           + KL+N LI +    G    A      L + G+KPS +TY  L+       R ++ + + 
Sbjct: 196 LGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVH 255

Query: 131 SQVEENGMD--------------------------------PDSIFFNAVINAFSESGNM 158
            ++ ++G +                                 D++ +  +I+   E+   
Sbjct: 256 REMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLF 315

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
           EEAMD   +M+ S   P   TY  L+ G     +     ++L +M  EG   P+ R +N 
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEG-CYPSRRIFNS 374

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE------ADQAEEVIV 272
           L+ A+C   + + A+ ++ KM   G +P  V YN +      N +       + AE+   
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYG 434

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           EM    V  N      +    C  GK ++A    R M   G  P+   ++ +I       
Sbjct: 435 EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
             D    +   MK   V PDV TY+ +++++   G + + ++ FD+M + G  P+   Y+
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM--- 449
            L   Y++ ++   A EL   M+  G  PNVV +T +I G C  G +++A +++ +M   
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGN 614

Query: 450 -----------CEHG--VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
                       + G    PN+ T+  L+ G  +A +   A ++L +M   G  P    +
Sbjct: 615 ADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674

Query: 497 LLLAEARRATGLTKEAKRILSKIKNK 522
             L +     G   EA+ + +K+  +
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSER 700



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 105/458 (22%), Positives = 195/458 (42%), Gaps = 25/458 (5%)

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++++ G  P  + +NA++  F E+  ++ A     +M +SG      T    +     
Sbjct: 220 LGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCK 279

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           AG+  E++ L++    +   K +   Y  ++   C      EA + + +M +S   P+VV
Sbjct: 280 AGRWREALALIE----KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVV 335

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +     +  +  + + ++  M   G  P+ R    +I  YC+ G    A +  + M
Sbjct: 336 TYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM 395

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL-------MKEFRVNPDVITYSTIMNA 362
            + G  P  V++N+LI G         +D VL L       M +  V  + +  S +   
Sbjct: 396 GDCGCQPGYVVYNILIGGICGNEKLPSLD-VLELAEKAYGEMLDAHVVLNKVNVSNLARC 454

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              AG  +K   I  +M   G  PD   YS +        + + A  L   M  +   P+
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           V  +T +I  +C  G + +A + FD+M   G +PN+ T+  L+  Y +AR+   A E+ +
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
           +M + G  P   T+  L +    +G  ++A +I ++         M    DIP   ++  
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR---------MRGNADIP--DVDMY 623

Query: 543 YHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLL 580
           +  +      PN+     +V  D    A  +K+ R LL
Sbjct: 624 FKIDDGNIRDPNIFTYGALV--DGLCKAHKVKEARDLL 659



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 104/472 (22%), Positives = 184/472 (38%), Gaps = 72/472 (15%)

Query: 148 VINAFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLIKGYGIAGK---PEESVKLLDLM 203
           V++  S   N E  +  F W  ++ G   T   Y+ L++  G  G    PE+ ++ +   
Sbjct: 132 VVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREI--- 188

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNV----MHKMAASGMKPDVVTYNTIATAYA 259
            R+ + +   +  NVL+R  C        WNV    + ++   G KP  +TYN +   + 
Sbjct: 189 -RDEDKEILGKLLNVLIRKCCRNG----LWNVALEELGRLKDLGYKPSRLTYNALVRVFL 243

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +    D A  V  EM  +G   +G T G  +   CK G+ +EAL      +E+ +  + V
Sbjct: 244 EADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK-EEFKL--DTV 300

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           I+  +I G  E    +   + L+ M+     P+V+TY  ++        + +CK I   M
Sbjct: 301 IYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMM 360

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD--- 436
              G  P    ++ L   Y R  +   A +LL  M + G  P  V++  +I G C +   
Sbjct: 361 ITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKL 420

Query: 437 --------------------------------------GSMDRAIEVFDKMCEHGVSPNL 458
                                                 G  ++A  +  +M   G  P+ 
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480

Query: 459 KTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSK 518
            T+  ++     A +   A  + + MK+  V P   T+ +L ++    GL ++A++    
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD- 539

Query: 519 IKNKERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQ-------IPNVVS 563
               E   +  A   +   +L   Y K    +S   L +       IPNVV+
Sbjct: 540 ----EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/455 (25%), Positives = 204/455 (44%), Gaps = 39/455 (8%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSE 154
           F  +   G  P +     +L  L    R++ + ++ S + + G++P    +N ++++F +
Sbjct: 182 FQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCK 241

Query: 155 SGNMEEAMDTFWKM--KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPN 212
           +G M++A+     M  + +G  P   TYN +I G    G+ E++ +L+D+M      K +
Sbjct: 242 AGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK--KAS 299

Query: 213 LRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIV 272
             TYN L+        + +A  ++ +M   G+ P VVTYNT+     + G A+ A+    
Sbjct: 300 AFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFD 359

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           EM   G+ P+  T   +I+GYCK G +K+AL     +K  G+ P ++ +N+LI G+  + 
Sbjct: 360 EMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLG 419

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA-- 390
           D +G   +   M E    PDV TY+ +MN       +   +  FD+M   G++PD  A  
Sbjct: 420 DLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYN 479

Query: 391 ---------------------------------YSILAKGYVREQEPEKAEELLMTMIES 417
                                            Y++L  G  +    + A  L M M+  
Sbjct: 480 TRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTD 539

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G   + V +T +I   C  G +  A  +FD M   G+SP++ T+   +  Y      + A
Sbjct: 540 GLRLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLA 599

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
               + M   GV P + T+ +L  A    G T+ A
Sbjct: 600 YGWFRKMLEEGVEPNEVTYNVLMHALCRMGRTESA 634



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 188/395 (47%), Gaps = 1/395 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+  L+ R   ++A A+   +   G  P++VTY TL+  L       +      ++   G
Sbjct: 306 LITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKG 365

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD I +N++IN + ++GN+++A+  F  +K +GL PT  TYN LI GY   G  E + 
Sbjct: 366 LLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGAR 425

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L + M+ E +  P++ TY +L+   C  +N+        +M + G++PD   YNT  +A
Sbjct: 426 RLKEEMTEE-DCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISA 484

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G    A ++  EM   G+  +  T  ++I G CK G +K+A      M   G+  +
Sbjct: 485 ELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLD 544

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V +  LI    E         +   M    ++P V+TY+  ++ +   G +      F 
Sbjct: 545 CVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFR 604

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M + G++P+   Y++L     R    E A +    M+E G  PN   +T +I G C +G
Sbjct: 605 KMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEG 664

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
           +   AI ++ +M + G+ P+  T   L  G+ E  
Sbjct: 665 NWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEGH 699



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 214/488 (43%), Gaps = 39/488 (7%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V+    ++  L +  +  + +A+++++++ G +PS+ TY TLL +     R +   +++ 
Sbjct: 194 VKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDSFCKAGRMDQAVALLK 253

Query: 132 QVEEN--GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
            +E    G  P+ + +N VIN  +  G +E+A      M+ S    +  TYN LI G   
Sbjct: 254 DMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLSK-KASAFTYNPLITGLLA 312

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
               E++  LL  M  EG V P + TYN L+       N   A     +M A G+ PD++
Sbjct: 313 RDFVEKAGALLLEMENEGIV-PTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLI 371

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN++   Y + G   QA  +  +++  G+ P   T  I+I GYC+ G ++ A R    M
Sbjct: 372 TYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEM 431

Query: 310 KEYGVHPNLVIFNLLIKGFVEI----MDRDGVDEVL----------------------AL 343
            E    P++  + +L+ G   +    M R   DE+L                      A+
Sbjct: 432 TEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAI 491

Query: 344 MKEFR---------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSIL 394
              F+         ++ D +TY+ +++     G +     ++  M   G++ D   Y+ L
Sbjct: 492 TNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCL 551

Query: 395 AKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGV 454
              +       +A+ +   M+ SG  P+VV +T  I  +C  G++  A   F KM E GV
Sbjct: 552 IHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGV 611

Query: 455 SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKR 514
            PN  T+  LM       +   A +    M   G+ P K T+ LL +     G    A R
Sbjct: 612 EPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIR 671

Query: 515 ILSKIKNK 522
           +  ++  K
Sbjct: 672 LYCEMHQK 679



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 132/276 (47%), Gaps = 4/276 (1%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAA-LTIQK 121
           M +E C   V + T LMN           +  F+ ++  G +P    Y T ++A LTI  
Sbjct: 431 MTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGA 490

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
             N+   +  ++   G+  D++ +N +I+   ++G++++A   + KM   GL     TY 
Sbjct: 491 ITNAFQ-LREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYT 549

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            LI  +   G+  E+  + D M   G + P++ TY + +  +C   N+  A+    KM  
Sbjct: 550 CLIHAHCERGRLIEAKNIFDGMVASG-LSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLE 608

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
            G++P+ VTYN +  A  + G  + A +   EM   G+ PN  T  ++I G CKEG    
Sbjct: 609 EGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVH 668

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           A+R    M + G+HP+    N L KGF E    D V
Sbjct: 669 AIRLYCEMHQKGIHPDHCTHNALFKGFGEGHMYDAV 704



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 126/298 (42%), Gaps = 36/298 (12%)

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGII 289
           T+  +   +MA  G+ P V   N +          D    V  +M   GV+P+  T   +
Sbjct: 176 TQCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTL 235

Query: 290 ISGYCKEGKIKEALRFARTM--KEYGVHPNLVIFNLLIKG------------FVEIMD-- 333
           +  +CK G++ +A+   + M  +  G  PN V +N++I G             V+IM   
Sbjct: 236 LDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIMRLS 295

Query: 334 -----------------RDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCK 373
                            RD V++  AL+ E     + P V+TY+T+++     G  +  +
Sbjct: 296 KKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQ 355

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
             FD+M   G+ PD   Y+ L  GY +    ++A  L   +  +G  P V+ +  +I G+
Sbjct: 356 VKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGY 415

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           C  G ++ A  + ++M E    P++ T+  LM G    R           M + G+ P
Sbjct: 416 CRLGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEP 473



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 124/274 (45%), Gaps = 15/274 (5%)

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           Q      EM  +GV P  + C  ++       +  +       M + GV P++  +N L+
Sbjct: 177 QCLSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLL 236

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVN-----PDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
             F +      +D+ +AL+K+         P+ +TY+ ++N  +  G ++K  ++ D M 
Sbjct: 237 DSFCKA---GRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVDIM- 292

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
           +   K  A  Y+ L  G +     EKA  LL+ M   G  P VV + T+I G    G+ +
Sbjct: 293 RLSKKASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAE 352

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            A   FD+M   G+ P+L T+ +L+ GY +A    +A  +   +K  G+ P   T+ +L 
Sbjct: 353 AAQVKFDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILI 412

Query: 501 EARRATGLTKEAKRILSKIKNKERTNEMEAEEDI 534
           +     G  + A+R+      KE   E +   D+
Sbjct: 413 DGYCRLGDLEGARRL------KEEMTEEDCLPDV 440


>gi|255548407|ref|XP_002515260.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545740|gb|EEF47244.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 878

 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 201/390 (51%), Gaps = 5/390 (1%)

Query: 53  DSQPQTHC-SFCMNKESCRTVRS--MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVT 109
           DS     C  F + +ES +  +    + ++++L   GK + A+A+F+  ++ G+  ++  
Sbjct: 168 DSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYA 227

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESG-NMEEAMDTFWKM 168
           ++ L++A       N    +   ++ NG+ P+ + +NAVI+A  + G   ++ ++ F  M
Sbjct: 228 FSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGM 287

Query: 169 KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKN 228
             +G+ P   T+N+L+      G  E + +L   M  +G +  ++ TYN L+ A C    
Sbjct: 288 LSNGVQPDRITFNSLLAVCSRGGLWEAARRLFSAMVDKG-IDQDIFTYNTLLDAVCKGGQ 346

Query: 229 ITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI 288
           +  A+ +M +M    + P+VVTY+T+   YA+ G  D A  +  EM+  GV  +  +   
Sbjct: 347 MDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNT 406

Query: 289 IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR 348
           ++S Y K G+ ++AL   + M+  G+  ++V +N L+ G+ +    D V  V   MK  R
Sbjct: 407 LLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVRRVFEEMKRGR 466

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           V+P+++TYST+++ +S  G   +  E+F +  +AG+K D   YS L     +    E + 
Sbjct: 467 VSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDALCKNGLVESSV 526

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGS 438
            LL  M + G  PNVV + +II  +    S
Sbjct: 527 TLLDEMTKEGIRPNVVTYNSIIDAFGRSAS 556



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 198/404 (49%), Gaps = 8/404 (1%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLI--EGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           T L+  L  RG   +A   F   +  E G        + +++ L    +     ++    
Sbjct: 157 TFLLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDTA 216

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG-K 192
            + G       F+A+I+A+  SG   EA+  F  MK +GL P   TYN +I   G  G +
Sbjct: 217 LKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVE 276

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN-VMHKMAASGMKPDVVTY 251
            ++ V++ D M   G V+P+  T+N L+ A C+   + EA   +   M   G+  D+ TY
Sbjct: 277 FKKVVEIFDGMLSNG-VQPDRITFNSLL-AVCSRGGLWEAARRLFSAMVDKGIDQDIFTY 334

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+  A  + G+ D A E++ EM    + PN  T   +I GY K G++ +AL     MK 
Sbjct: 335 NTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKF 394

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            GV  + V +N L+  + ++   +   +V   M+   +  DV+TY+ ++  +      D+
Sbjct: 395 LGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDE 454

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
            + +F++M +  + P+   YS L   Y +    ++A E+     ++G   +VV+++ +I 
Sbjct: 455 VRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALID 514

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM--WGYSEARQ 473
             C +G ++ ++ + D+M + G+ PN+ T+ +++  +G S + Q
Sbjct: 515 ALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQ 558



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 184/398 (46%), Gaps = 6/398 (1%)

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF--WKMKESGLTPTTSTYNT 182
           ++ +++   E     PD   F  ++      G+  +A+  F     +ESG        + 
Sbjct: 138 ALENVLLNFESRLCGPDDYTF--LLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASA 195

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I   G  GK E +  + D   +EG  K  +  ++ L+ A+       EA  V   M ++
Sbjct: 196 MISTLGRLGKVELAKAVFDTALKEGYGK-TVYAFSALISAYGRSGYCNEAIKVFDSMKSN 254

Query: 243 GMKPDVVTYNTIATAYAQNG-EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
           G+ P++VTYN +  A  + G E  +  E+   M  NGVQP+  T   +++   + G  + 
Sbjct: 255 GLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRGGLWEA 314

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMN 361
           A R    M + G+  ++  +N L+    +    D   E+++ M    + P+V+TYST+++
Sbjct: 315 ARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMID 374

Query: 362 AWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHP 421
            ++  G +D    +F++M   G+  D  +Y+ L   Y +    E+A ++   M  +G   
Sbjct: 375 GYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRK 434

Query: 422 NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEIL 481
           +VV +  +++G+      D    VF++M    VSPNL T+ TL+  YS+      A E+ 
Sbjct: 435 DVVTYNALLAGYGKQYRYDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVF 494

Query: 482 QIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +  K  G+      +  L +A    GL + +  +L ++
Sbjct: 495 REFKQAGLKADVVLYSALIDALCKNGLVESSVTLLDEM 532



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/316 (24%), Positives = 148/316 (46%), Gaps = 32/316 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++++ + G+   A  I + +      P++VTY+T++       R +   ++ ++++  G
Sbjct: 337 LLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLG 396

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D + +N +++ +++ G  E+A+D   +M+ +G+     TYN L+ GYG   + +E  
Sbjct: 397 VGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYRYDEVR 456

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           ++ + M R G V PNL TY+ L+  +       EA  V  +   +G+K DVV Y+ +  A
Sbjct: 457 RVFEEMKR-GRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALIDA 515

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK------------------- 298
             +NG  + +  ++ EM   G++PN  T   II  + +                      
Sbjct: 516 LCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTALQVESL 575

Query: 299 ----IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL------MKEFR 348
               ++EA+      KE   +  + IF  L           G  E+L +      M E +
Sbjct: 576 SSIVVQEAIESQAADKED--NRIIEIFGKLAAEKACEAKNSGKQEILCILGVFQKMHELK 633

Query: 349 VNPDVITYSTIMNAWS 364
           + P+V+T+S I+NA S
Sbjct: 634 IKPNVVTFSAILNACS 649



 Score =  103 bits (256), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 81/347 (23%), Positives = 152/347 (43%), Gaps = 10/347 (2%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDL-MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           Y  L++  G  G   ++V+  +  + RE       +  + ++        +  A  V   
Sbjct: 156 YTFLLRELGNRGDSAKAVRCFEFAVRRESGKNEQGKLASAMISTLGRLGKVELAKAVFDT 215

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG- 297
               G    V  ++ + +AY ++G  ++A +V   M+ NG+ PN  T   +I    K G 
Sbjct: 216 ALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLVTYNAVIDACGKGGV 275

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE----VLALMKEFRVNPDV 353
           + K+ +     M   GV P+ + FN L+     +  R G+ E    + + M +  ++ D+
Sbjct: 276 EFKKVVEIFDGMLSNGVQPDRITFNSLLA----VCSRGGLWEAARRLFSAMVDKGIDQDI 331

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
            TY+T+++A    G MD   EI  +M    I P+   YS +  GY +    + A  +   
Sbjct: 332 FTYNTLLDAVCKGGQMDLAFEIMSEMPTKNILPNVVTYSTMIDGYAKVGRLDDALNMFNE 391

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           M   G   + V + T++S +   G  ++A++V  +M   G+  ++ T+  L+ GY +  +
Sbjct: 392 MKFLGVGLDRVSYNTLLSVYAKLGRFEQALDVCKEMENAGIRKDVVTYNALLAGYGKQYR 451

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
                 + + MK   V P   T+  L +     GL KEA  +  + K
Sbjct: 452 YDEVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFK 498



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 59/246 (23%), Positives = 110/246 (44%), Gaps = 1/246 (0%)

Query: 277 NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
           +G    G+    +IS   + GK++ A     T  + G    +  F+ LI  +      + 
Sbjct: 184 SGKNEQGKLASAMISTLGRLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNE 243

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGF-MDKCKEIFDDMGKAGIKPDAHAYSILA 395
             +V   MK   + P+++TY+ +++A    G    K  EIFD M   G++PD   ++ L 
Sbjct: 244 AIKVFDSMKSNGLMPNLVTYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLL 303

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
               R    E A  L   M++ G   ++  + T++   C  G MD A E+  +M    + 
Sbjct: 304 AVCSRGGLWEAARRLFSAMVDKGIDQDIFTYNTLLDAVCKGGQMDLAFEIMSEMPTKNIL 363

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           PN+ T+ T++ GY++  +   A  +   MK  GV   + ++  L       G  ++A  +
Sbjct: 364 PNVVTYSTMIDGYAKVGRLDDALNMFNEMKFLGVGLDRVSYNTLLSVYAKLGRFEQALDV 423

Query: 516 LSKIKN 521
             +++N
Sbjct: 424 CKEMEN 429



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 48/230 (20%), Positives = 100/230 (43%), Gaps = 27/230 (11%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           E + +F  +  G   P+L+TY+TL+   +    +     +  + ++ G+  D + ++A+I
Sbjct: 454 EVRRVFEEMKRGRVSPNLLTYSTLIDVYSKGGLYKEAMEVFREFKQAGLKADVVLYSALI 513

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE--------------- 194
           +A  ++G +E ++    +M + G+ P   TYN++I  +G +   +               
Sbjct: 514 DALCKNGLVESSVTLLDEMTKEGIRPNVVTYNSIIDAFGRSASAQCVVDDSGETTALQVE 573

Query: 195 --ESVKLLDLMSREGNVKPNLRTYNVL----VRAWCNEKN-----ITEAWNVMHKMAASG 243
              S+ + + +  +   K + R   +         C  KN     I     V  KM    
Sbjct: 574 SLSSIVVQEAIESQAADKEDNRIIEIFGKLAAEKACEAKNSGKQEILCILGVFQKMHELK 633

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
           +KP+VVT++ I  A ++    + A  ++ E+     Q  G   G+++ GY
Sbjct: 634 IKPNVVTFSAILNACSRCDSFEDASMLLEELRLFDNQVYGVAHGLLM-GY 682



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 65/125 (52%), Gaps = 3/125 (2%)

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           R  + E A+ +  T ++ G+   V  F+ +IS +   G  + AI+VFD M  +G+ PNL 
Sbjct: 202 RLGKVELAKAVFDTALKEGYGKTVYAFSALISAYGRSGYCNEAIKVFDSMKSNGLMPNLV 261

Query: 460 TFETLMWGYSEARQPWR-AEEILQIMKAFGVHPQKSTF-LLLAEARRATGLTKEAKRILS 517
           T+  ++    +    ++   EI   M + GV P + TF  LLA   R  GL + A+R+ S
Sbjct: 262 TYNAVIDACGKGGVEFKKVVEIFDGMLSNGVQPDRITFNSLLAVCSRG-GLWEAARRLFS 320

Query: 518 KIKNK 522
            + +K
Sbjct: 321 AMVDK 325


>gi|357111070|ref|XP_003557338.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Brachypodium distachyon]
          Length = 878

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 216/453 (47%), Gaps = 4/453 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S+  +++ L +  + +EA  IF +  E G  P+ VTY +L+  L  + + +  + +  ++
Sbjct: 422 SVNIMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKM 481

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
            + G D + I + ++I  F   G  E+    + +M   G  P  +  NT +     AG+ 
Sbjct: 482 LDAGHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEV 541

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           E+   + + M   G + P++R+Y++L+          E  N+   M+  G   D   YN 
Sbjct: 542 EKGRAIFEDMKSFGFL-PDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNA 600

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     ++G+ D+A EV+ EM+   V P   T G I+ G  K  ++ EA       K  G
Sbjct: 601 VVDGLCKSGKVDKAYEVLEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKG 660

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
           +  N+++++ LI GF ++   D    +L  M +  + P+V T++++M+A      +D+  
Sbjct: 661 IELNVILYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNVYTWNSLMDALVKTEEIDEAL 720

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
             F  M +    P+ + YSIL  G  R Q+  KA      M + G  PNVV +TT+ISG 
Sbjct: 721 ICFQSMKEMKCSPNTYTYSILINGLCRVQKYNKAFVFWQEMQKQGLIPNVVTYTTMISGL 780

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
              G++  A  +F++   +G  P+  +F  L+ G S A +P  A ++ +  +  G     
Sbjct: 781 AKVGNITDAYSLFERFKTNGGIPDSASFNALIEGMSNANRPMEAYQVFEETRLRGCRLNV 840

Query: 494 STFLLLAEARRATGLTKEAK---RILSKIKNKE 523
            T + L +A   T   ++A     +LS+I   +
Sbjct: 841 KTCISLLDALNKTECLEQAAIVGAVLSEIAKSQ 873



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/440 (24%), Positives = 204/440 (46%), Gaps = 2/440 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G    A   F+ L   G +P  V+YT+++  L    R      +  Q+E     P +  +
Sbjct: 260 GSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAY 319

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N +I  +  +   ++A     +++E G  P+  ++N+++   G   K +E++ L D+M +
Sbjct: 320 NTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKRKVDEALTLFDVMKK 379

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
           +   KPN+ TYN+++   C    + EA+ +  +M  +G+ P++++ N +     +  + +
Sbjct: 380 DA--KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVNIMVDRLCKANQLE 437

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           +A  +       G  PN  T   +I G  K+GKI +A R    M + G   N +I+  LI
Sbjct: 438 EAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDAGHDANPIIYTSLI 497

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           + F     ++   ++   M      PD+   +T M+    AG ++K + IF+DM   G  
Sbjct: 498 RNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKGRAIFEDMKSFGFL 557

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PD  +YSIL  G  +  +  +   +   M + GF  +   +  ++ G C  G +D+A EV
Sbjct: 558 PDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDGLCKSGKVDKAYEV 617

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
            ++M    V P + T+ +++ G ++  +   A  + +  K+ G+      +  L +    
Sbjct: 618 LEEMKVKHVHPTVATYGSIVDGLAKIDRLDEAYMLFEEAKSKGIELNVILYSSLIDGFGK 677

Query: 506 TGLTKEAKRILSKIKNKERT 525
            G   EA  IL ++  K  T
Sbjct: 678 VGRIDEAYLILEEMMKKGLT 697



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/500 (20%), Positives = 214/500 (42%), Gaps = 43/500 (8%)

Query: 58  THCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL 117
           +H  + +   +C        L+ +L+   + ++A  +   +     +P    YT L+ AL
Sbjct: 133 SHLGYGLPNPAC------AALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGAL 186

Query: 118 TIQKRFNSIHSIMSQVEENG-----------------------------------MDPDS 142
              ++      ++ Q+++ G                                   ++PD 
Sbjct: 187 AEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPDI 246

Query: 143 IFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDL 202
           + +N  I+ F ++G+++ A   F ++K  GL P   +Y +++     AG+  E+ +L   
Sbjct: 247 VLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFGQ 306

Query: 203 MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNG 262
           M  E +V P    YN ++  + + +   +A+ ++ ++   G  P VV++N+I T   +  
Sbjct: 307 MEAERDV-PCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 365

Query: 263 EADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFN 322
           + D+A  +   M+ +  +PN  T  III   C  G++ EA +    M+  G+ PNL+  N
Sbjct: 366 KVDEALTLFDVMKKDA-KPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVN 424

Query: 323 LLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKA 382
           +++    +    +    +     E   NP+ +TY ++++     G +D    +F+ M  A
Sbjct: 425 IMVDRLCKANQLEEAHRIFESASERGCNPNSVTYCSLIDGLGKKGKIDDAYRLFEKMLDA 484

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
           G   +   Y+ L + +      E   ++   MI  G  P++ +  T +      G +++ 
Sbjct: 485 GHDANPIIYTSLIRNFFMHGRKEDGHKIYKEMIRRGGRPDLTLLNTYMDCVFKAGEVEKG 544

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
             +F+ M   G  P+++++  L+ G ++A Q      I Q M   G       +  + + 
Sbjct: 545 RAIFEDMKSFGFLPDVRSYSILIHGLTKAGQARETSNIFQAMSQQGFALDARAYNAVVDG 604

Query: 503 RRATGLTKEAKRILSKIKNK 522
              +G   +A  +L ++K K
Sbjct: 605 LCKSGKVDKAYEVLEEMKVK 624



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/319 (23%), Positives = 148/319 (46%), Gaps = 2/319 (0%)

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+L+ MS  G   PN      LV      + + +A+ V+  M     +P    Y  +  A
Sbjct: 127 KVLEEMSHLGYGLPN-PACAALVATLVRSRRLEDAFRVIGAMRHLKFRPPFSAYTVLIGA 185

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            A+  + ++A E++ +M+  G + +      ++    +EG+++ AL     +K   + P+
Sbjct: 186 LAEARQPERALELLRQMQDVGYEVSVPLFTTLVRALAREGQMEPALALVDEVKGSCLEPD 245

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V++N+ I  F +    D   +    +K   + PD ++Y++++     AG + + +E+F 
Sbjct: 246 IVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDDVSYTSMVWVLCKAGRLGEAEELFG 305

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M      P A+AY+ +  GY   +  + A +LL  + E G  P+VV F +I++      
Sbjct: 306 QMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLERLRERGCIPSVVSFNSILTCLGKKR 365

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFL 497
            +D A+ +FD M +    PN+ T+  ++     A +   A +I   M+  G+ P   +  
Sbjct: 366 KVDEALTLFDVM-KKDAKPNISTYNIIIDMLCMAGRVNEAYKIRDEMELAGLFPNLLSVN 424

Query: 498 LLAEARRATGLTKEAKRIL 516
           ++ +        +EA RI 
Sbjct: 425 IMVDRLCKANQLEEAHRIF 443



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/253 (20%), Positives = 110/253 (43%), Gaps = 4/253 (1%)

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           + PD   YN +    + +  A   E+V+ EM H G       C  +++   +  ++++A 
Sbjct: 106 LPPD--AYNAVLPFLSHDLAA--LEKVLEEMSHLGYGLPNPACAALVATLVRSRRLEDAF 161

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
           R    M+     P    + +LI    E    +   E+L  M++      V  ++T++ A 
Sbjct: 162 RVIGAMRHLKFRPPFSAYTVLIGALAEARQPERALELLRQMQDVGYEVSVPLFTTLVRAL 221

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
           +  G M+    + D++  + ++PD   Y++    + +    + A +    +   G  P+ 
Sbjct: 222 AREGQMEPALALVDEVKGSCLEPDIVLYNVCIDCFGKAGSVDMAWKFFHELKAHGLRPDD 281

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           V +T+++   C  G +  A E+F +M      P    + T++ GY  A +   A ++L+ 
Sbjct: 282 VSYTSMVWVLCKAGRLGEAEELFGQMEAERDVPCAYAYNTMIMGYGSAERFDDAYKLLER 341

Query: 484 MKAFGVHPQKSTF 496
           ++  G  P   +F
Sbjct: 342 LRERGCIPSVVSF 354



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/167 (23%), Positives = 84/167 (50%), Gaps = 3/167 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M K     V +   LM++L++  +  EA   F ++ E    P+  TY+ L+  L   +++
Sbjct: 692 MKKGLTPNVYTWNSLMDALVKTEEIDEALICFQSMKEMKCSPNTYTYSILINGLCRVQKY 751

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           N       ++++ G+ P+ + +  +I+  ++ GN+ +A   F + K +G  P ++++N L
Sbjct: 752 NKAFVFWQEMQKQGLIPNVVTYTTMISGLAKVGNITDAYSLFERFKTNGGIPDSASFNAL 811

Query: 184 IKGYGIAGKPEESVKLLDLMSREG---NVKPNLRTYNVLVRAWCNEK 227
           I+G   A +P E+ ++ +     G   NVK  +   + L +  C E+
Sbjct: 812 IEGMSNANRPMEAYQVFEETRLRGCRLNVKTCISLLDALNKTECLEQ 858


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/391 (26%), Positives = 190/391 (48%), Gaps = 6/391 (1%)

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +   + ++G+ P+   +N ++ A  ++  +  A     +M   G  P   TY T++    
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 205

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
              + +E+ ++L  M       P   +YN +V A C E  + E ++V+  M   G++P+V
Sbjct: 206 KLDRLDEATEVLAAM------PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNV 259

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           +TY TI  A+ + GE   A  ++  M   G  PN  T   ++ G   +G++ +AL   R 
Sbjct: 260 ITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRW 319

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M   G  P+ V +N+LI+G   + D  G   +L  M++    P+V TYST+++ +S AG 
Sbjct: 320 MVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGD 379

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           +     I++DM ++G KP+   Y+ +   + ++    +A+ L+  M+     PN V F T
Sbjct: 380 LGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNT 439

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +I   C    + RA+ VF +M  HG  PN +T+  L+ G         A  ++  M++ G
Sbjct: 440 LIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHG 499

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           +     T+  +      T +++EA   + K+
Sbjct: 500 IELSLVTYNTVVSGLCQTRMSREAMVFVGKM 530



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 95/394 (24%), Positives = 188/394 (47%), Gaps = 1/394 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   ++ +L    + QE  ++ ++++  G +P+++TYTT++ A           +I++++
Sbjct: 226 SYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARM 285

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  P+ + F A++    + G + +A+D +  M   G  P+T +YN LI+G    G  
Sbjct: 286 VITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDL 345

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           + +  +L+ M + G   PN+RTY+ L+  +    ++  A ++ + M+ SG KP+VV Y  
Sbjct: 346 KGASSILNSMEQHG-CFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTN 404

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +   + +    +QA+ +I +M      PN  T   +I   C   ++  AL     M+ +G
Sbjct: 405 MVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHG 464

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             PN   +N LI G     +      ++  M+   +   ++TY+T+++         +  
Sbjct: 465 CVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAM 524

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
                M   GI+P+A  +S +   Y +E E   A  +L  M     H N++++T +++  
Sbjct: 525 VFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAEL 584

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           C+   +  A+    KM   G+ PN  T+  L+ G
Sbjct: 585 CNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRG 618



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 186/425 (43%), Gaps = 7/425 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+ +L +  +   A+ + + +   G  P  VTY T+++ L    R +    +++      
Sbjct: 165 LVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLA-----A 219

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M P +  +NA++ A      M+E       M   GL P   TY T++  +  AG+   + 
Sbjct: 220 MPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMAC 279

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +L  M   G   PN+ T+  LVR   ++  + +A ++   M A G  P  V+YN +   
Sbjct: 280 AILARMVITG-CTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRG 338

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
               G+   A  ++  ME +G  PN RT   +I G+ K G +  A+     M   G  PN
Sbjct: 339 LCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPN 398

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V++  ++  F + +  +    ++  M      P+ +T++T++ +      + +   +F 
Sbjct: 399 VVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFH 458

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M + G  P+   Y+ L  G  RE     A  ++  M   G   ++V + T++SG C   
Sbjct: 459 EMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTR 518

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF- 496
               A+    KM   G+ PN  TF  ++  Y +  +   A  +L  M     H     + 
Sbjct: 519 MSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYT 578

Query: 497 LLLAE 501
           +L+AE
Sbjct: 579 ILMAE 583



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 172/362 (47%), Gaps = 3/362 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T ++++  + G+ + A AI   ++  G  P++VT+T L+  L    R +    +  
Sbjct: 259 VITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWR 318

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +   G  P ++ +N +I      G+++ A      M++ G  P   TY+TLI G+  AG
Sbjct: 319 WMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAG 378

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
               ++ + + MSR G  KPN+  Y  +V  +C +    +A +++ KM      P+ VT+
Sbjct: 379 DLGGAISIWNDMSRSG-CKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTF 437

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+  +        +A  V  EM  +G  PNGRT   +I G  +EG   +AL     M+ 
Sbjct: 438 NTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQS 497

Query: 312 YGVHPNLVIFNLLIKGFVEI-MDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           +G+  +LV +N ++ G  +  M R+ +  V  ++ +  + P+  T+S I++A+   G + 
Sbjct: 498 HGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQ-GIQPNAFTFSAIIHAYCKEGEVR 556

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
               +   M       +   Y+IL      + +   A   L+ M+  G +PN V +  ++
Sbjct: 557 MAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLV 616

Query: 431 SG 432
            G
Sbjct: 617 RG 618



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/426 (21%), Positives = 189/426 (44%), Gaps = 6/426 (1%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +++N+ + G  P++ TY  L+ AL    R  +   ++ ++   G  PD + +  +++   
Sbjct: 146 VYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLC 205

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           +   ++EA +       + + P  ++YN ++       + +E   ++  M   G ++PN+
Sbjct: 206 KLDRLDEATEVL-----AAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG-LQPNV 259

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
            TY  +V A+C    +  A  ++ +M  +G  P+VVT+  +      +G    A ++   
Sbjct: 260 ITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRW 319

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M   G  P+  +  I+I G C  G +K A     +M+++G  PN+  ++ LI GF +  D
Sbjct: 320 MVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGD 379

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
             G   +   M      P+V+ Y+ +++ +      ++ K + D M      P+   ++ 
Sbjct: 380 LGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNT 439

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L +     +   +A  +   M   G  PN   +  +I G   +G+   A+ +  +M  HG
Sbjct: 440 LIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHG 499

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           +  +L T+ T++ G  + R    A   +  M   G+ P   TF  +  A    G  + A 
Sbjct: 500 IELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAA 559

Query: 514 RILSKI 519
            +L  +
Sbjct: 560 WMLGAM 565



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/265 (26%), Positives = 131/265 (49%), Gaps = 2/265 (0%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C   VR+ + L++   + G    A +I+N++   G KP++V YT ++     +  
Sbjct: 355 MEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLM 414

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           FN   S++ ++      P+++ FN +I +  +   +  A+  F +M+  G  P   TYN 
Sbjct: 415 FNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNE 474

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G    G   +++ ++  M   G ++ +L TYN +V   C  +   EA   + KM   
Sbjct: 475 LIHGLFREGNCGDALHMVTEMQSHG-IELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQ 533

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G++P+  T++ I  AY + GE   A  ++  M       N     I+++  C + K+ +A
Sbjct: 534 GIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQDKLVDA 593

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKG 327
           + +   M   G++PN V +N+L++G
Sbjct: 594 MTYLLKMLYEGIYPNTVTWNVLVRG 618



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 92/204 (45%), Gaps = 1/204 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   L+ SL +  +   A  +F+ +   G  P+  TY  L+  L  +        +++++
Sbjct: 436 TFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEM 495

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           + +G++   + +N V++   ++    EAM    KM   G+ P   T++ +I  Y   G+ 
Sbjct: 496 QSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEV 555

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
             +  +L  M+   N   N+  Y +L+   CN+  + +A   + KM   G+ P+ VT+N 
Sbjct: 556 RMAAWMLGAMNVV-NCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNV 614

Query: 254 IATAYAQNGEADQAEEVIVEMEHN 277
           +     +N    +  + I  +  N
Sbjct: 615 LVRGVFRNLGCIEPSDFIQHITMN 638


>gi|356575482|ref|XP_003555869.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g35130-like [Glycine max]
          Length = 576

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 195/397 (49%), Gaps = 3/397 (0%)

Query: 89  QEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAV 148
           +EA++ +  L+E    P+  TY  L+ A  I        ++ +++   G+   ++ +NA 
Sbjct: 172 KEAESTYLQLLEARCIPTEDTYALLIKAYCISGLLEKAEAVFAEMRNYGLPSSAVVYNAY 231

Query: 149 INAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREG 207
           IN   + GN ++A + F +MK+    PTT TY  LI  YG AGK   ++KL  ++MS   
Sbjct: 232 INGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMSH-- 289

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
           + KPN+ TY  LV A+  E    +A  V  +M  +G++PDV  YN +  AY++ G    A
Sbjct: 290 DCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPYGA 349

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
            E+   M+H G +P+  +  I++  Y K G   +A    + MK  G+ P +    +L+  
Sbjct: 350 AEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVLLSA 409

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           + ++   +  +E+L  M +  +  D    ++++N +   G   K +E+   M K     D
Sbjct: 410 YSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSYVAD 469

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+IL   Y +    E+ E+L   +   G  P+VV +T+ I  +       + +E+F+
Sbjct: 470 ISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLYLKCLEIFE 529

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
           +M + G  P+  T + L+   S   Q  +   +++ M
Sbjct: 530 EMIDDGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 566



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/453 (23%), Positives = 209/453 (46%), Gaps = 25/453 (5%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGN 157
           L+    KP ++ Y  L+ A   +  +    S   Q+ E    P    +  +I A+  SG 
Sbjct: 146 LLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLLEARCIPTEDTYALLIKAYCISGL 205

Query: 158 MEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYN 217
           +E+A   F +M+  GL  +   YN  I G    G  +++ ++   M ++   KP   TY 
Sbjct: 206 LEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDA-CKPTTETYT 264

Query: 218 VLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           +L+  +        A  + H+M +   KP++ TY  +  A+A+ G  ++AEEV  +M+  
Sbjct: 265 MLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEA 324

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGV 337
           G++P+      ++  Y + G    A      M+  G  P+   +N+L+  + +   +D  
Sbjct: 325 GLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGFQDDA 384

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           + V   MK   + P + ++  +++A+S  G ++KC+EI + M K+G+K D +  + +   
Sbjct: 385 EAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNL 444

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           Y R  +  K EE+L  M +  +  ++  +  +I+ +   G ++R  ++F  +   G+ P+
Sbjct: 445 YGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSKGLKPD 504

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + T+ + +  YS+ +   +  EI + M   G +P   T                AK +L+
Sbjct: 505 VVTWTSRIGAYSKKKLYLKCLEIFEEMIDDGCYPDGGT----------------AKVLLA 548

Query: 518 KIKNKERTNEMEAEEDIPVESLERLYHKEATTA 550
              N+++T +        V ++ R  HK+  T 
Sbjct: 549 ACSNEDQTEQ--------VTTVIRTMHKDMKTV 573



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/359 (26%), Positives = 163/359 (45%), Gaps = 5/359 (1%)

Query: 166 WKMKESGLTPTTSTYNTLIKGYG--IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
           W +  S   P    YN LI+ +G  +  K  ES  L  L   E    P   TY +L++A+
Sbjct: 144 WILLRSSFKPDVICYNLLIEAFGQKLLYKEAESTYLQLL---EARCIPTEDTYALLIKAY 200

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C    + +A  V  +M   G+    V YN       + G +D+AEE+   M+ +  +P  
Sbjct: 201 CISGLLEKAEAVFAEMRNYGLPSSAVVYNAYINGLMKGGNSDKAEEIFKRMKKDACKPTT 260

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T  ++I+ Y K GK   AL+    M  +   PN+  +  L+  F      +  +EV   
Sbjct: 261 ETYTMLINLYGKAGKSFMALKLFHEMMSHDCKPNICTYTALVNAFAREGLCEKAEEVFEQ 320

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M+E  + PDV  Y+ +M A+S AG+     EIF  M   G +PD  +Y+IL   Y +   
Sbjct: 321 MQEAGLEPDVYAYNALMEAYSRAGYPYGAAEIFSLMQHMGCEPDRASYNILVDAYGKAGF 380

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
            + AE +   M   G  P +     ++S +   GS+++  E+ ++MC+ G+  +     +
Sbjct: 381 QDDAEAVFKDMKRVGITPTMKSHMVLLSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNS 440

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           ++  Y    Q  + EE+L++M+        ST+ +L       G  +  + +   + +K
Sbjct: 441 MLNLYGRLGQFGKMEEVLRVMEKGSYVADISTYNILINRYGQAGFIERMEDLFQLLPSK 499



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 173/345 (50%), Gaps = 19/345 (5%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSI---HSIMSQVE 134
           +N L++ G   +A+ IF  + +   KP+  TYT L+       K F ++   H +MS   
Sbjct: 232 INGLMKGGNSDKAEEIFKRMKKDACKPTTETYTMLINLYGKAGKSFMALKLFHEMMS--- 288

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
            +   P+   + A++NAF+  G  E+A + F +M+E+GL P    YN L++ Y  AG P 
Sbjct: 289 -HDCKPNICTYTALVNAFAREGLCEKAEEVFEQMQEAGLEPDVYAYNALMEAYSRAGYPY 347

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
            + ++  LM   G  +P+  +YN+LV A+       +A  V   M   G+ P + ++  +
Sbjct: 348 GAAEIFSLMQHMG-CEPDRASYNILVDAYGKAGFQDDAEAVFKDMKRVGITPTMKSHMVL 406

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
            +AY++ G  ++ EE++ +M  +G++ +      +++ Y + G+  +     R M++   
Sbjct: 407 LSAYSKMGSVNKCEEILNQMCKSGLKLDTYVLNSMLNLYGRLGQFGKMEEVLRVMEKGSY 466

Query: 315 HPNLVIFNLLIK-----GFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
             ++  +N+LI      GF+E M     +++  L+    + PDV+T+++ + A+S     
Sbjct: 467 VADISTYNILINRYGQAGFIERM-----EDLFQLLPSKGLKPDVVTWTSRIGAYSKKKLY 521

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
            KC EIF++M   G  PD     +L      E + E+   ++ TM
Sbjct: 522 LKCLEIFEEMIDDGCYPDGGTAKVLLAACSNEDQTEQVTTVIRTM 566


>gi|449489553|ref|XP_004158346.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g55840-like [Cucumis sativus]
          Length = 1079

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/419 (25%), Positives = 205/419 (48%), Gaps = 1/419 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+   + +G    A   F++++  G KPS+ T   ++A++    R + +     Q+  + 
Sbjct: 111 LIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVWXFFKQMLTSR 170

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   FN +I+     G +++A++    M+ +G  PT  +YNTL+      G+ + ++
Sbjct: 171 VCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRFKFAL 230

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L+  M  +G ++ ++ TYN+ + + C      + + V+ KM    + P+ V+YNT+   
Sbjct: 231 VLIHHMECKG-IQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTLING 289

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           + + G+   A  V  EM    + PN  T  I+I+GYC  G  +EALR    M+   V PN
Sbjct: 290 FVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVMEANDVRPN 349

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
            V    L+ G  +    D    +L      R + + I+++ +++     G +D+  ++  
Sbjct: 350 EVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAFQLLI 409

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M K G+ PD   +S+L  G+ +     KA+E++  +   GF PN VIF+T+I   C  G
Sbjct: 410 EMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVG 469

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           ++   ++ +  M  +G + +  T  +L+    E  +   AEE L  +   G+ P   TF
Sbjct: 470 NVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNSVTF 528



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 201/419 (47%), Gaps = 1/419 (0%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           +    C  V S   L++ L  +GK ++A  I   +   G+ P++V+Y TLL+    + RF
Sbjct: 167 LTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWCCKKGRF 226

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
                ++  +E  G+  D   +N  I++   +    +      KM+   +TP   +YNTL
Sbjct: 227 KFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYLVLKKMRNKMITPNEVSYNTL 286

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I G+   GK   + ++ + M  E N+ PNL TYN+L+  +C   N  EA  ++  M A+ 
Sbjct: 287 INGFVKEGKIGVATRVFNEMI-ELNLSPNLITYNILINGYCINGNFEEALRLLDVMEAND 345

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++P+ VT  T+     ++ + D A  ++     N    N  +  ++I G C+ G + EA 
Sbjct: 346 VRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLLDEAF 405

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
           +    M + GV+P+++ F++LI GF ++ + +   EV++ +      P+ + +ST++   
Sbjct: 406 QLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFSTLIYNS 465

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G + +  + +  M   G   D    + L        +  +AEE L  +   G  PN 
Sbjct: 466 CKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIGLVPNS 525

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           V F  II+G+ + G    A  VFDKM   G  P+  T+ +L+    + +  W A ++L+
Sbjct: 526 VTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLK 584



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/465 (23%), Positives = 205/465 (44%), Gaps = 37/465 (7%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L+N  ++ GK   A  +FN +IE    P+L+TY  L+    I   F     ++  +
Sbjct: 282 SYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEALRLLDVM 341

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E N + P+ +    ++N   +S   + A +   +   +  +    ++  +I G    G  
Sbjct: 342 EANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDGLCRNGLL 401

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           +E+ +LL  M ++G V P++ T++VL+  +C   N+ +A  VM K+   G  P+ V ++T
Sbjct: 402 DEAFQLLIEMCKDG-VYPDIITFSVLINGFCKVGNLNKAKEVMSKIYREGFVPNNVIFST 460

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G   +  +    M  NG   +  TC  +++  C+ GK+ EA  F   +   G
Sbjct: 461 LIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCNSLVASLCENGKLVEAEEFLHHISRIG 520

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVL-------------------------------- 341
           + PN V F+ +I G+  + D  G   V                                 
Sbjct: 521 LVPNSVTFDCIINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEAR 580

Query: 342 ALMKEFRVNP---DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
            L+K+    P   D I+Y+T++   S +G + +   +F++M +  I PD++ Y+ +  G 
Sbjct: 581 KLLKKLHCIPLAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGL 640

Query: 399 VREQEPEKAEELLMTMIESGFHP-NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
           +RE     A   L  +++      N +++T  I G    G    A+ +F +M E G+S +
Sbjct: 641 IREGRLVCAFIFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLD 700

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           L    ++  GYS   + + A  ++   +   V P  +TF +L   
Sbjct: 701 LIALNSITDGYSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHG 745



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/470 (21%), Positives = 199/470 (42%), Gaps = 38/470 (8%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
           + +N+ S   + S T +++ L   G   EA  +   + + G  P ++T++ L+       
Sbjct: 376 YSINRTSLNCI-SHTVMIDGLCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVG 434

Query: 122 RFNSIHSIMSQVEENGMDPDSIFF-----------------------------------N 146
             N    +MS++   G  P+++ F                                   N
Sbjct: 435 NLNKAKEVMSKIYREGFVPNNVIFSTLIYNSCKVGNVYEGMKFYAAMNLNGQNADNFTCN 494

Query: 147 AVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSRE 206
           +++ +  E+G + EA +    +   GL P + T++ +I GY   G    +  + D M   
Sbjct: 495 SLVASLCENGKLVEAEEFLHHISRIGLVPNSVTFDCIINGYANVGDGSGAFSVFDKMISC 554

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
           G+  P+  TY  L++  C  +N  EA  ++ K+    +  D ++YNT+    +++G   +
Sbjct: 555 GH-HPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIPLAVDTISYNTLIVEISKSGNLLE 613

Query: 267 AEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF-ARTMKEYGVHPNLVIFNLLI 325
           A  +  EM  N + P+  T   I+SG  +EG++  A  F  R M++  +  N +++   I
Sbjct: 614 AVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAFIFLGRLMQKEILTLNSIVYTCFI 673

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
            G  +         +   M+E  ++ D+I  ++I + +S  G +     +        + 
Sbjct: 674 DGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRNKNVI 733

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P+   ++IL  GY R Q+     +L   M  SGF PN + + ++I G C+ G ++  I++
Sbjct: 734 PNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLELGIKM 793

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
                    + +  TF  L+    E     +  ++   M+ F V   K T
Sbjct: 794 LKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDT 843



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/480 (21%), Positives = 189/480 (39%), Gaps = 35/480 (7%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            ++N     G    A ++F+ +I  GH PS  TY +LL  L   + F     ++ ++    
Sbjct: 531  IINGYANVGDGSGAFSVFDKMISCGHHPSPFTYGSLLKVLCKGQNFWEARKLLKKLHCIP 590

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            +  D+I +N +I   S+SGN+ EA+  F +M ++ + P + TY  ++ G    G+   + 
Sbjct: 591  LAVDTISYNTLIVEISKSGNLLEAVRLFEEMIQNNILPDSYTYTCILSGLIREGRLVCAF 650

Query: 198  KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
              L  + ++  +  N   Y   +           A  +  +M   G+  D++  N+I   
Sbjct: 651  IFLGRLMQKEILTLNSIVYTCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDG 710

Query: 258  YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            Y++ G+   A  +I +  +  V PN  T  I++ GY +   I    +    M+  G  PN
Sbjct: 711  YSRMGKVFSASSLISKTRNKNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPN 770

Query: 318  ------LVI-----------------------------FNLLIKGFVEIMDRDGVDEVLA 342
                  L++                             FN+LI+   EI D D V ++  
Sbjct: 771  RLTYHSLILGLCNHGMLELGIKMLKMFIAESSTIDDLTFNMLIRKCCEINDLDKVIDLTH 830

Query: 343  LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
             M+ FRV+ D  T   + +                +M K G  P +  Y  + K   R  
Sbjct: 831  NMEVFRVSLDKDTQKAVTDVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVG 890

Query: 403  EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
            + + A +L   M+  G   +      ++ G    G ++ A+ +  +M      P   TF 
Sbjct: 891  DIQGAFKLKDQMVALGISLDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFT 950

Query: 463  TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            TLM  + +      A  +  +M+ + V      + +L  A  A G    A     +IK K
Sbjct: 951  TLMHVFCKKDNFKEAHNLKILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQK 1010



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 172/412 (41%), Gaps = 64/412 (15%)

Query: 166 WKMKESGLTPTTSTY------NTLIKG--YG--------IAGKPEESVKLLD-LMSREGN 208
           W +K+ GL P   T+      + L++   YG        +A K   S  L   LM     
Sbjct: 41  WVIKQPGLEPNHLTHILGITTHVLVRARLYGYAKSILKHLAQKNSGSNFLFGVLMDTYPL 100

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
              N   +++L+R +  +  +  A N    M   G KP V T N I  +  +N  A    
Sbjct: 101 CSSNPAVFDLLIRVYLRQGMVGHAVNTFSSMLIRGFKPSVYTCNMIMASMVKNCRAHLVW 160

Query: 269 EVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF 328
               +M  + V PN  +  I+IS  C +GK+K+A+     M+  G  P +V +N L+   
Sbjct: 161 XFFKQMLTSRVCPNVSSFNILISVLCVQGKLKKAVNILTMMERNGYVPTIVSYNTLLSWC 220

Query: 329 VEIMDRDGVDEVLALMKEFR-VNPDVITYSTIM-----NAWSTAGFMDKCKEIFDDMGKA 382
            +   R     VL    E + +  DV TY+  +     N+ S  G++     +   M   
Sbjct: 221 CK-KGRFKFALVLIHHMECKGIQADVCTYNMFIDSLCRNSRSAQGYL-----VLKKMRNK 274

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRA 442
            I P+  +Y+ L  G+V+E +   A  +   MIE    PN++ +  +I+G+C +G+ + A
Sbjct: 275 MITPNEVSYNTLINGFVKEGKIGVATRVFNEMIELNLSPNLITYNILINGYCINGNFEEA 334

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ-------------------- 482
           + + D M  + V PN  T  TL+ G  ++ +   A  IL+                    
Sbjct: 335 LRLLDVMEANDVRPNEVTIGTLLNGLYKSAKFDVARNILERYSINRTSLNCISHTVMIDG 394

Query: 483 ------IMKAF---------GVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
                 + +AF         GV+P   TF +L       G   +AK ++SKI
Sbjct: 395 LCRNGLLDEAFQLLIEMCKDGVYPDIITFSVLINGFCKVGNLNKAKEVMSKI 446



 Score = 86.3 bits (212), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/379 (19%), Positives = 154/379 (40%), Gaps = 36/379 (9%)

Query: 76   TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
            T  ++ L + G+ + A  +F  + E G    L+   ++    +   +  S  S++S+   
Sbjct: 670  TCFIDGLFKAGQSKAALYLFKEMEEKGLSLDLIALNSITDGYSRMGKVFSASSLISKTRN 729

Query: 136  NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
              + P+   FN +++ +S   ++      +  M+ SG  P   TY++LI G    G  E 
Sbjct: 730  KNVIPNLTTFNILLHGYSRGQDIMSCFKLYNLMRRSGFFPNRLTYHSLILGLCNHGMLEL 789

Query: 196  SVKLLDLMSREGNVKPNLRTYNVLVRAWC-------------------------NEKNIT 230
             +K+L +   E +   +L T+N+L+R  C                          +K +T
Sbjct: 790  GIKMLKMFIAESSTIDDL-TFNMLIRKCCEINDLDKVIDLTHNMEVFRVSLDKDTQKAVT 848

Query: 231  EA----------WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
            +           +  MH+M   G  P    Y T+     + G+   A ++  +M   G+ 
Sbjct: 849  DVLVRRMVSQNYFVFMHEMLKKGFIPTSKQYCTMMKRMCRVGDIQGAFKLKDQMVALGIS 908

Query: 281  PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
             +      ++ G    GKI+EA+   + M      P    F  L+  F +  +      +
Sbjct: 909  LDDAAECAMVRGLALCGKIEEAMWILQRMLRMKKIPTTSTFTTLMHVFCKKDNFKEAHNL 968

Query: 341  LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
              LM+ +RV  D++ Y+ +++A    G +    + ++++ + G+ P+   Y +L      
Sbjct: 969  KILMEHYRVKLDIVAYNVLISACCANGDVITALDFYEEIKQKGLLPNMTTYRVLVSAIST 1028

Query: 401  EQEPEKAEELLMTMIESGF 419
            +    + E +L  + + G 
Sbjct: 1029 KHYVSRGEIVLKDLNDRGL 1047


>gi|357166784|ref|XP_003580849.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04810,
           chloroplastic-like [Brachypodium distachyon]
          Length = 904

 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 208/427 (48%), Gaps = 36/427 (8%)

Query: 108 VTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWK 167
           + Y+ ++ A       +    ++ ++EE+G+D     ++++++ ++   + ++ +  F +
Sbjct: 375 IIYSNIIHAHCQSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFER 434

Query: 168 MKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEK 227
           +KE   TP+  +Y  LI  Y   GK  +++ +   M   G +K N +TY++L+  + +  
Sbjct: 435 LKECCFTPSIISYGCLINLYIKIGKVTKAIAISKEMESYG-IKHNNKTYSMLISGFIHLH 493

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
           +   A+++  +M  SG++PD   YN +  A+ + G  D+A  ++ +M+   +QP+ R   
Sbjct: 494 DFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQKERMQPSNRAFR 553

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
            II G+   G +K AL     M+  G  P ++ +N LI G ++    +    VL  M   
Sbjct: 554 PIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIA 613

Query: 348 RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH------------------ 389
            + P+  TY+ IM  ++  G + K  E F  + + G+K D +                  
Sbjct: 614 GITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSA 673

Query: 390 -----------------AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
                             Y+IL  G+ R  +  +A +L+  M E G  PN+  +T+ I+ 
Sbjct: 674 LAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKEDGVPPNIHTYTSYINA 733

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C  G M RA +V ++M + G+ PNLKT+ TL+ G+++A  P RA +  + MK  G+ P 
Sbjct: 734 CCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPD 793

Query: 493 KSTFLLL 499
           ++ +  L
Sbjct: 794 EAAYHCL 800



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 94/334 (28%), Positives = 164/334 (49%), Gaps = 6/334 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           ++ + L++  I       A +IF  +++ G +P    Y  L+ A       +    I+ +
Sbjct: 480 KTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEK 539

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +++  M P +  F  +I  F+ +G+M+ A++    M+ SG  PT  TYN LI G     +
Sbjct: 540 MQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVMTYNALIHGLIKKNQ 599

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            E +V +L+ MS  G + PN  TY +++R +    +I +A+    K+   G+K DV  Y 
Sbjct: 600 VERAVSVLNKMSIAG-ITPNEHTYTIIMRGYAANGDIGKAFEYFTKIKEGGLKLDVYIYE 658

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           T+  A  ++G    A  V  EM    +  N     I+I G+ + G + EA    + MKE 
Sbjct: 659 TLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDVWEAADLMKQMKED 718

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           GV PN+  +   I    +  D     +V+  M +  + P++ TY+T++  W+ A   D+ 
Sbjct: 719 GVPPNIHTYTSYINACCKAGDMQRAQKVIEEMADVGLKPNLKTYTTLIKGWAKASLPDRA 778

Query: 373 KEIFDDMGKAGIKPDAHAY-----SILAKGYVRE 401
            + F++M  AG+KPD  AY     S+L++  V E
Sbjct: 779 LKSFEEMKLAGLKPDEAAYHCLVTSLLSRATVME 812



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/527 (20%), Positives = 225/527 (42%), Gaps = 82/527 (15%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           +E+CR  R + +         +P++ QA+ +   E   KPS   +  ++     +   + 
Sbjct: 237 EEACREFRRVVE--------SRPEDWQAVVSAF-ERIPKPSRREFGLMIVYYAKRGDKHH 287

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
             +    +   G++P++  F ++++A++ + +M   +    +MK  G+  T  TY+ +I 
Sbjct: 288 ARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLSCVEEMKAEGIELTIVTYSIIIA 347

Query: 186 GYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           G+      + +  L  +  ++ G++  N   Y+ ++ A C   N+  A  ++ +M   G+
Sbjct: 348 GFAKINDAQSADNLFKEAKAKLGDL--NGIIYSNIIHAHCQSGNMDRAEELVREMEEDGI 405

Query: 245 K-----------------------------------PDVVTYNTIATAYAQNGEADQAEE 269
                                               P +++Y  +   Y + G+  +A  
Sbjct: 406 DAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSIISYGCLINLYIKIGKVTKAIA 465

Query: 270 VIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFV 329
           +  EME  G++ N +T  ++ISG+        A      M + G+ P+  I+NLLI+ F 
Sbjct: 466 ISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEMLKSGLQPDRAIYNLLIEAFC 525

Query: 330 EIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAH 389
           ++ + D    +L  M++ R+ P    +  I+  ++ AG M +   I D M ++G  P   
Sbjct: 526 KMGNMDRAIRILEKMQKERMQPSNRAFRPIIEGFAVAGDMKRALNILDLMRRSGCAPTVM 585

Query: 390 AYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
            Y+ L  G +++ + E+A  +L  M  +G  PN   +T I+ G+ ++G + +A E F K+
Sbjct: 586 TYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGDIGKAFEYFTKI 645

Query: 450 CEHGVSPNLKTFETLMW-----------------------------------GYSEARQP 474
            E G+  ++  +ETL+                                    G++     
Sbjct: 646 KEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNILIDGWARRGDV 705

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           W A ++++ MK  GV P   T+     A    G  + A++++ ++ +
Sbjct: 706 WEAADLMKQMKEDGVPPNIHTYTSYINACCKAGDMQRAQKVIEEMAD 752



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 73/280 (26%), Positives = 129/280 (46%), Gaps = 1/280 (0%)

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           KP    +  +   YA+ G+   A      M   G++PN      ++  Y     ++  L 
Sbjct: 266 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGVLS 325

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               MK  G+   +V ++++I GF +I D    D +    K    + + I YS I++A  
Sbjct: 326 CVEEMKAEGIELTIVTYSIIIAGFAKINDAQSADNLFKEAKAKLGDLNGIIYSNIIHAHC 385

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
            +G MD+ +E+  +M + GI     AY  +  GY   Q+ +K   +   + E  F P+++
Sbjct: 386 QSGNMDRAEELVREMEEDGIDAPIDAYHSMMHGYTIIQDEKKCLIVFERLKECCFTPSII 445

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +  +I+ +   G + +AI +  +M  +G+  N KT+  L+ G+        A  I + M
Sbjct: 446 SYGCLINLYIKIGKVTKAIAISKEMESYGIKHNNKTYSMLISGFIHLHDFANAFSIFEEM 505

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
              G+ P ++ + LL EA    G    A RIL K++ KER
Sbjct: 506 LKSGLQPDRAIYNLLIEAFCKMGNMDRAIRILEKMQ-KER 544



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 107/220 (48%), Gaps = 2/220 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C  TV +   L++ LI++ + + A ++ N +   G  P+  TYT ++        
Sbjct: 575 MRRSGCAPTVMTYNALIHGLIKKNQVERAVSVLNKMSIAGITPNEHTYTIIMRGYAANGD 634

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                   ++++E G+  D   +  ++ A  +SG M+ A+    +M    +   T  YN 
Sbjct: 635 IGKAFEYFTKIKEGGLKLDVYIYETLLRACCKSGRMQSALAVTREMSTQKIARNTFVYNI 694

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+   G   E+  L+  M  +G V PN+ TY   + A C   ++  A  V+ +MA  
Sbjct: 695 LIDGWARRGDVWEAADLMKQMKEDG-VPPNIHTYTSYINACCKAGDMQRAQKVIEEMADV 753

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
           G+KP++ TY T+   +A+    D+A +   EM+  G++P+
Sbjct: 754 GLKPNLKTYTTLIKGWAKASLPDRALKSFEEMKLAGLKPD 793


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/554 (24%), Positives = 240/554 (43%), Gaps = 54/554 (9%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T++++ L E    +EA    + +      P++VTY  LL     +++      I+S +  
Sbjct: 303 TQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMIT 362

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE- 194
            G  P    FN++I+A+  SG+   A     KM + G  P    YN LI   GI G  + 
Sbjct: 363 EGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIG--GICGNEKL 420

Query: 195 ESVKLLDLMSR------EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            S+ +L+L  +      + +V  N    + L R  C      +A++++ +M + G  PD 
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TY+ +        + D A  +  EM+ N V P+  T  I+I  +CK G +++A ++   
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M   G  PN+V +  LI  +++       +E+  +M      P+V+TY+ +++    +G 
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 369 MDKCKEIFDDM-GKAGI---------------KPDAHAYSILAKGYVREQEPEKAEELLM 412
           ++K  +I+  M G A I                P+   Y  L  G  +  + ++A +LL 
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M   G  PN +++  +I G+C  G +D A  VF KM E G  PN+ T+ +L+    + +
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
           +   A ++L  M      P    +  + +     G T EA R++S ++ K          
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEK---------- 770

Query: 533 DIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWF 592
                              +PN++    ++  D  G A  + K   L+R   +      F
Sbjct: 771 -----------------GCHPNVVTYTAMI--DGFGKAGKVDKCLELMRQMGAKGCAPNF 811

Query: 593 ATTSMYLSHSCKSG 606
            T  + ++H C +G
Sbjct: 812 VTYRVLINHCCAAG 825



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 217/483 (44%), Gaps = 30/483 (6%)

Query: 64  MNKESCRTVRSMTKLMNSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           M  E C   R   ++ NSLI      G    A  +   + + G +P  V Y  L+  +  
Sbjct: 360 MITEGCYPSR---RIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICG 416

Query: 120 QKRFNSIHSI-MSQVEENGMDPDSIFFNAV-----INAFSESGNMEEAMDTFWKMKESGL 173
            ++  S+  + +++     M    +  N V           +G  E+A     +M   G 
Sbjct: 417 NEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGF 476

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
            P TSTY+ +I     A K + +  L + M +  +V P++ TY +L+ ++C    + +A 
Sbjct: 477 IPDTSTYSKVIGLLCNASKVDNAFLLFEEM-KSNHVVPDVFTYTILIDSFCKVGLLQQAR 535

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
               +M   G  P+VVTY  +  AY +  +   A E+   M   G  PN  T   +I G+
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595

Query: 294 CKEGKIKEALR-FARTMKEYGV---------------HPNLVIFNLLIKGFVEIMDRDGV 337
           CK G+I++A + +AR      +                PN+  +  L+ G  +       
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            ++L +M      P+ I Y  +++ +   G +D+ + +F  M + G  P+ + YS L   
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             +++  + A ++L  M+E+   PNV+I+T +I G C  G  D A  +   M E G  PN
Sbjct: 716 LFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPN 775

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + T+  ++ G+ +A +  +  E+++ M A G  P   T+ +L     A GL  +A ++L 
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835

Query: 518 KIK 520
           ++K
Sbjct: 836 EMK 838



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 205/450 (45%), Gaps = 58/450 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++S  + G  Q+A+  F+ ++  G  P++VTYT L+ A    ++ +S + +  
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEA---------------MDTFWKMKESGL-TP 175
            +   G  P+ + + A+I+   +SG +E+A               +D ++K+ +  +  P
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
              TY  L+ G   A K +E+  LLD+MS EG  +PN   Y+ L+  +C    + EA  V
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEG-CEPNHIVYDALIDGFCKVGKLDEAQMV 693

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
             KM+  G  P+V TY+++     ++   D A +V+  M  N   PN      +I G CK
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PD 352
            GK  EA R    M+E G HPN+V +  +I GF +      VD+ L LM++       P+
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGK---AGKVDKCLELMRQMGAKGCAPN 810

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGK-------AGIK-------------------- 385
            +TY  ++N    AG +D   ++ D+M +       AG +                    
Sbjct: 811 FVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEI 870

Query: 386 ------PDAHAYSILAKGYVREQEPEKAEEL--LMTMIESGFHPNVVIFTTIISGWCSDG 437
                 P   AY IL   + +    E A EL   M+   S    +  +++++I       
Sbjct: 871 AENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLAS 930

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWG 467
            +D+A E++  M + G  P L  F  L+ G
Sbjct: 931 KVDKAFELYADMIKRGGIPELSIFFYLVKG 960



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 212/506 (41%), Gaps = 59/506 (11%)

Query: 75  MTKLMNSLIER----GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           + KL+N LI +    G    A      L + G+KPS +TY  L+       R ++ + + 
Sbjct: 196 LGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVH 255

Query: 131 SQVEENGMD--------------------------------PDSIFFNAVINAFSESGNM 158
            ++ ++G +                                 D++ +  +I+   E+   
Sbjct: 256 REMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLF 315

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
           EEAMD   +M+ S   P   TY  L+ G     +     ++L +M  EG   P+ R +N 
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEG-CYPSRRIFNS 374

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE------ADQAEEVIV 272
           L+ A+C   + + A+ ++ KM   G +P  V YN +      N +       + AE+   
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYG 434

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           EM    V  N      +    C  GK ++A    R M   G  P+   ++ +I       
Sbjct: 435 EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
             D    +   MK   V PDV TY+ +++++   G + + ++ FD+M + G  P+   Y+
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM--- 449
            L   Y++ ++   A EL   M+  G  PNVV +T +I G C  G +++A +++ +M   
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGN 614

Query: 450 -----------CEHG--VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
                       + G    PN+ T+  L+ G  +A +   A ++L +M   G  P    +
Sbjct: 615 ADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674

Query: 497 LLLAEARRATGLTKEAKRILSKIKNK 522
             L +     G   EA+ + +K+  +
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSER 700



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/458 (22%), Positives = 195/458 (42%), Gaps = 25/458 (5%)

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++++ G  P  + +NA++  F E+  ++ A     +M +SG      T    +     
Sbjct: 220 LGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCK 279

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           AG+  E++ L++    +   K +   Y  ++   C      EA + + +M +S   P+VV
Sbjct: 280 AGRWREALALIE----KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVV 335

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +     +  +  + + ++  M   G  P+ R    +I  YC+ G    A +  + M
Sbjct: 336 TYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM 395

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL-------MKEFRVNPDVITYSTIMNA 362
            + G  P  V++N+LI G         +D VL L       M +  V  + +  S +   
Sbjct: 396 GDCGCQPGYVVYNILIGGICGNEKLPSLD-VLELAEKAYGEMLDAHVVLNKVNVSNLARC 454

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              AG  +K   I  +M   G  PD   YS +        + + A  L   M  +   P+
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           V  +T +I  +C  G + +A + FD+M   G +PN+ T+  L+  Y +AR+   A E+ +
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
           +M + G  P   T+  L +    +G  ++A +I ++         M    DIP   ++  
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR---------MRGNADIP--DVDMY 623

Query: 543 YHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLL 580
           +  +      PN+     +V  D    A  +K+ R LL
Sbjct: 624 FKIDDGNIRDPNIFTYGALV--DGLCKAHKVKEARDLL 659



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 78/331 (23%), Positives = 147/331 (44%), Gaps = 36/331 (10%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P++ TY  L+  L    +      ++  +   G +P+ I ++A+I+ F + G ++EA   
Sbjct: 634 PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMV 693

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
           F KM E G  P   TY++LI       + + ++K+L  M  E +  PN+  Y  ++   C
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRM-LENSCAPNVIIYTEMIDGLC 752

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
                 EA+ +M  M   G  P+VVTY  +   + + G+ D+  E++ +M   G  PN  
Sbjct: 753 KVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFV 812

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGF-------VEIMDRDGV 337
           T  ++I+  C  G + +A +    MK+     ++  +  +I+GF       + ++D    
Sbjct: 813 TYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAE 872

Query: 338 DEVLALMKEFRVNPDVIT----------------------------YSTIMNAWSTAGFM 369
           +  + ++  +R+  D                               YS+++ + S A  +
Sbjct: 873 NVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIESLSLASKV 932

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           DK  E++ DM K G  P+   +  L KG +R
Sbjct: 933 DKAFELYADMIKRGGIPELSIFFYLVKGLIR 963



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/291 (24%), Positives = 126/291 (43%), Gaps = 40/291 (13%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   + GK  EAQ +F  + E G+ P++ TY++L+  L   KR +    ++S++ EN 
Sbjct: 677 LIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENS 736

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
             P+ I +  +I+   + G  +EA      M+E G  P   TY  +I G+G AGK ++ +
Sbjct: 737 CAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCL 796

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L+  M  +G   PN  TY VL+   C    + +A  ++ +M  +     +  Y  +   
Sbjct: 797 ELMRQMGAKG-CAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEG 855

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK------- 310
           +  N E   +  ++ E+  N   P      I+I  +CK G+++ AL   + M        
Sbjct: 856 F--NREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSA 913

Query: 311 ------------------------------EYGVHPNLVIFNLLIKGFVEI 331
                                         + G  P L IF  L+KG + I
Sbjct: 914 ADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRI 964



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 102/468 (21%), Positives = 182/468 (38%), Gaps = 64/468 (13%)

Query: 148 VINAFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLIKGYGIAGK---PEESVKLLDLM 203
           V++  S   N E  +  F W  ++ G   T   Y+ L++  G  G    PE+ ++ +   
Sbjct: 132 VVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREI--- 188

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            R+ + +   +  NVL+R  C       A   + ++   G KP  +TYN +   + +   
Sbjct: 189 -RDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADR 247

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D A  V  EM  +G   +G T G  +   CK G+ +EAL      +E+ +  + VI+  
Sbjct: 248 LDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK-EEFKL--DTVIYTQ 304

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           +I G  E    +   + L+ M+     P+V+TY  ++        + +CK I   M   G
Sbjct: 305 MISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEG 364

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD------- 436
             P    ++ L   Y R  +   A +LL  M + G  P  V++  +I G C +       
Sbjct: 365 CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLD 424

Query: 437 ----------------------------------GSMDRAIEVFDKMCEHGVSPNLKTFE 462
                                             G  ++A  +  +M   G  P+  T+ 
Sbjct: 425 VLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            ++     A +   A  + + MK+  V P   T+ +L ++    GL ++A++        
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD----- 539

Query: 523 ERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQ-------IPNVVS 563
           E   +  A   +   +L   Y K    +S   L +       IPNVV+
Sbjct: 540 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587


>gi|242048026|ref|XP_002461759.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
 gi|241925136|gb|EER98280.1| hypothetical protein SORBIDRAFT_02g007610 [Sorghum bicolor]
          Length = 896

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/520 (22%), Positives = 225/520 (43%), Gaps = 68/520 (13%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L+ ++ E  +P+ A  +   + E G++  +  +TTL+ AL  + R     +++ +V
Sbjct: 184 AYTVLIGAMAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEV 243

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGL-------------------- 173
           + + ++PD + +N  I+ F ++GN++ A   F ++K  GL                    
Sbjct: 244 KGSCLEPDIVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRL 303

Query: 174 ---------------TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG----------- 207
                           P    YNT+I GYG AG+ E + KLLD +   G           
Sbjct: 304 SEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSI 363

Query: 208 ----------------------NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
                                 + +PN  TYN+++   C    + EA+ +  +M  +G+ 
Sbjct: 364 LTCLGKKRKVDEALTLFEAMKKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLF 423

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P+++T N +     +  + + A E+       G  PN  T   +I G  K+G + +A R 
Sbjct: 424 PNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRL 483

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              M + G + N V++  LI+ F     ++   ++   M      PD+   +T M+    
Sbjct: 484 FENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFK 543

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
           AG ++K + IF+D+   G  PD  +YSIL  G  +  +  +   +   M + GF  +   
Sbjct: 544 AGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETSSIFHAMKQQGFALDARA 603

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
           +  ++ G+C  G +D+A EV ++M    V P + T+ +++ G ++  +   A  + +  K
Sbjct: 604 YNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGLAKIDRLDEAYMLFEEAK 663

Query: 486 AFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERT 525
           + G+      +  L +     G   EA  IL ++  K  T
Sbjct: 664 SKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLT 703



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/439 (25%), Positives = 206/439 (46%), Gaps = 34/439 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L   GK +EA  I + +   G  P+L+T   ++  L   K+F   + +     + G
Sbjct: 397 IIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRG 456

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
            +P+S+ + ++I+   + GN+++A   F  M ++G       Y +LI+ + + G+ E+  
Sbjct: 457 CNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGH 516

Query: 198 KLLDLMSREG-----------------------------NVK-----PNLRTYNVLVRAW 223
           K+   M+R G                             ++K     P++R+Y++L+   
Sbjct: 517 KIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGL 576

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
                  E  ++ H M   G   D   YN +   + ++G+ D+A EV+ EM+   V P  
Sbjct: 577 TKAGQARETSSIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTV 636

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T G II G  K  ++ EA       K  G+  N+++++ LI GF ++   D    +L  
Sbjct: 637 ATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEE 696

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M +  + P+V T++++M+A   A  +++    F  M +    P+ + YSIL  G  R Q+
Sbjct: 697 MMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRVQK 756

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
             KA      M + G  PNVV +TT+I+G    G++  A  +F++   +G +P+  +F  
Sbjct: 757 YNKAFVFWQEMQKQGLVPNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAASFNA 816

Query: 464 LMWGYSEARQPWRAEEILQ 482
           L+ G S A +   A  + +
Sbjct: 817 LIEGMSHANRAIEAYHVFE 835



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/429 (24%), Positives = 195/429 (45%), Gaps = 2/429 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T ++  L + G+  EA+ +F  +      P    Y T++       +F + + ++ Q+
Sbjct: 289 SYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQL 348

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +E G  P  + FN+++    +   ++EA+  F  MK+    P +STYN +I    +AGK 
Sbjct: 349 KERGCIPSVVSFNSILTCLGKKRKVDEALTLFEAMKKDA-EPNSSTYNIIIDMLCMAGKV 407

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           EE+  + D M   G + PNL T N++V   C  K    A+ +    +  G  P+ VTY +
Sbjct: 408 EEAYMIRDEMEHAG-LFPNLLTVNIMVDRLCKAKKFEPAYEMFETASQRGCNPNSVTYCS 466

Query: 254 IATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG 313
           +     + G  D A  +   M   G   N      +I  +   G+ ++  +  + M   G
Sbjct: 467 LIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFMHGRKEDGHKIFKEMNRRG 526

Query: 314 VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCK 373
             P+L + N  +    +  D +    +   +K +   PDV +YS +++  + AG   +  
Sbjct: 527 CQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIKGYGFLPDVRSYSILIHGLTKAGQARETS 586

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
            IF  M + G   DA AY+ +  G+ +  + +KA E+L  M      P V  + +II G 
Sbjct: 587 SIFHAMKQQGFALDARAYNAVVDGFCKSGKLDKAYEVLEEMKVKRVPPTVATYGSIIDGL 646

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
                +D A  +F++    G+  N+  + +L+ G+ +  +   A  IL+ M   G+ P  
Sbjct: 647 AKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLILEEMMKKGLTPNV 706

Query: 494 STFLLLAEA 502
            T+  L +A
Sbjct: 707 YTWNSLMDA 715



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/410 (23%), Positives = 191/410 (46%), Gaps = 6/410 (1%)

Query: 113 LLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG 172
           L++AL   +R +    +++ +      P    +  +I A +E+   E A++   +M+E G
Sbjct: 153 LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPERALELLRQMQEVG 212

Query: 173 LTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA 232
                  + TL++     G+ E ++ L+D + +   ++P++  YNV +  +    N+  A
Sbjct: 213 YEVGVPLFTTLVRALAREGRVEGALALVDEV-KGSCLEPDIVLYNVCIDCFGKAGNVDMA 271

Query: 233 WNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISG 292
           W   H++ + G+KPD V+Y ++     + G   +AEE+  +ME     P       +I G
Sbjct: 272 WKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVPCAYAYNTMIMG 331

Query: 293 YCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR--VN 350
           Y   G+ + A +    +KE G  P++V FN ++     +  +  VDE L L +  +    
Sbjct: 332 YGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTC---LGKKRKVDEALTLFEAMKKDAE 388

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P+  TY+ I++    AG +++   I D+M  AG+ P+    +I+     + ++ E A E+
Sbjct: 389 PNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLTVNIMVDRLCKAKKFEPAYEM 448

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
             T  + G +PN V + ++I G    G++D A  +F+ M + G + N   + +L+  +  
Sbjct: 449 FETASQRGCNPNSVTYCSLIDGLGKKGNVDDAYRLFENMLDTGHNANPVVYTSLIRNFFM 508

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
             +     +I + M   G  P  +      +     G  ++ + I   IK
Sbjct: 509 HGRKEDGHKIFKEMNRRGCQPDLTLLNTYMDCVFKAGDVEKGRAIFEDIK 558



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 139/298 (46%), Gaps = 2/298 (0%)

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           K+L+ MS  G   PN    + LV A    + + +A  V+  M     +P    Y  +  A
Sbjct: 133 KVLEEMSVLGYGVPNPACAD-LVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGA 191

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
            A+  + ++A E++ +M+  G +        ++    +EG+++ AL     +K   + P+
Sbjct: 192 MAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPD 251

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V++N+ I  F +  + D   +    +K   + PD ++Y++++     AG + + +E+F 
Sbjct: 252 IVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFG 311

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
            M      P A+AY+ +  GY    + E A +LL  + E G  P+VV F +I++      
Sbjct: 312 QMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSFNSILTCLGKKR 371

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            +D A+ +F+ M +    PN  T+  ++     A +   A  I   M+  G+ P   T
Sbjct: 372 KVDEALTLFEAM-KKDAEPNSSTYNIIIDMLCMAGKVEEAYMIRDEMEHAGLFPNLLT 428



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 104/216 (48%), Gaps = 1/216 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   +++ L +  +  EA  +F      G + +++ Y++L+       R +  + I+
Sbjct: 635 TVATYGSIIDGLAKIDRLDEAYMLFEEAKSKGIELNVIVYSSLIDGFGKVGRIDEAYLIL 694

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G+ P+   +N++++A  ++  + EA+  F  MKE   +P T TY+ LI G    
Sbjct: 695 EEMMKKGLTPNVYTWNSLMDALVKAEEINEALICFQSMKEMKCSPNTYTYSILINGLCRV 754

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K  ++      M ++G V PN+ TY  ++       NIT+A ++  +  A+G  PD  +
Sbjct: 755 QKYNKAFVFWQEMQKQGLV-PNVVTYTTMIAGLAKVGNITDACSLFERFKANGGTPDAAS 813

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTC 286
           +N +    +    A +A  V  E    G + N + C
Sbjct: 814 FNALIEGMSHANRAIEAYHVFEETRLKGCRINVKAC 849



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/229 (21%), Positives = 98/229 (42%)

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
           E+V+ EM   G       C  ++S   +  ++ +A R    M+     P    + +LI  
Sbjct: 132 EKVLEEMSVLGYGVPNPACADLVSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGA 191

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             E    +   E+L  M+E      V  ++T++ A +  G ++    + D++  + ++PD
Sbjct: 192 MAEARQPERALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPD 251

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y++    + +    + A +    +   G  P+ V +T++I   C  G +  A E+F 
Sbjct: 252 IVLYNVCIDCFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFG 311

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           +M      P    + T++ GY  A Q   A ++L  +K  G  P   +F
Sbjct: 312 QMETERAVPCAYAYNTMIMGYGSAGQFENAYKLLDQLKERGCIPSVVSF 360



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/211 (21%), Positives = 95/211 (45%), Gaps = 2/211 (0%)

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           YGV PN    +L +   V     D  + V+A M+  +  P    Y+ ++ A + A   ++
Sbjct: 143 YGV-PNPACADL-VSALVRTRRLDDAERVIAAMRRLKFRPAFSAYTVLIGAMAEARQPER 200

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             E+   M + G +     ++ L +   RE   E A  L+  +  S   P++V++   I 
Sbjct: 201 ALELLRQMQEVGYEVGVPLFTTLVRALAREGRVEGALALVDEVKGSCLEPDIVLYNVCID 260

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
            +   G++D A + F ++   G+ P+  ++ +++W   +A +   AEE+   M+     P
Sbjct: 261 CFGKAGNVDMAWKFFHELKSQGLKPDDVSYTSMIWVLCKAGRLSEAEELFGQMETERAVP 320

Query: 492 QKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
               +  +     + G  + A ++L ++K +
Sbjct: 321 CAYAYNTMIMGYGSAGQFENAYKLLDQLKER 351


>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 536

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 209/427 (48%), Gaps = 9/427 (2%)

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMD 163
           + S  TY  L  +L      +    +   ++ +G+ P+S     ++++F+E G +  A  
Sbjct: 100 RHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATA 159

Query: 164 TFWKMKE--SGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVR 221
              +  E         S  NTL+K      + E+++KL +   R  +   + +T+N+L+R
Sbjct: 160 LLLQSYEVEGCCMVVNSLLNTLVK----LDRVEDAMKLFEEHLRFQSCN-DTKTFNILIR 214

Query: 222 AWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN-GVQ 280
             C      +A  ++  M+  G  PD+VTYNT+   + ++ E  +A E+  +++ + G  
Sbjct: 215 GLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCS 274

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+  T   +ISGYCK GK++EA      M   G++P  V FN+L+ G+ +  +    +E+
Sbjct: 275 PDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEI 334

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
              M  F   PDV+T++++++ +   G +++   ++++M   G+ P+A  YSIL     +
Sbjct: 335 RGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCK 394

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
           E    KA ELL  +      P   ++  +I G+C  G ++ AI + ++M +    P+  T
Sbjct: 395 ENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKIT 454

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           F  L+ G+    + + A  I   M A G  P K T   L       G+ KEA   L++I 
Sbjct: 455 FTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYH-LNQIA 513

Query: 521 NKERTNE 527
           +K + N+
Sbjct: 514 HKGQIND 520



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 86/350 (24%), Positives = 165/350 (47%), Gaps = 34/350 (9%)

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
           N++ +  TYN+L R+ C       A  +   M + G+ P+      + +++A+ G+   A
Sbjct: 98  NIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCA 157

Query: 268 EEVIVEM-------------------------------EHNGVQP--NGRTCGIIISGYC 294
             ++++                                EH   Q   + +T  I+I G C
Sbjct: 158 TALLLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLC 217

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR-VNPDV 353
             GK ++A+     M  +G  P++V +N LIKGF +  +    +E+   +K     +PDV
Sbjct: 218 GVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDV 277

Query: 354 ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT 413
           +TY+++++ +  AG M +   + DDM + GI P    +++L  GY +  E   AEE+   
Sbjct: 278 VTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGK 337

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ 473
           MI  G  P+VV FT++I G+C  G +++   ++++M   G+ PN  T+  L+    +  +
Sbjct: 338 MISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENR 397

Query: 474 PWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
             +A E+L  + +  + PQ   +  + +     G   EA  I+ +++ K+
Sbjct: 398 LLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKK 447



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 73/302 (24%), Positives = 138/302 (45%), Gaps = 2/302 (0%)

Query: 67  ESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           +SC   ++   L+  L   GK ++A  +   +   G  P +VTY TL+            
Sbjct: 201 QSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKA 260

Query: 127 HSIMSQVE-ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
           + +   V+  +G  PD + + ++I+ + ++G M+EA      M   G+ PT  T+N L+ 
Sbjct: 261 NEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVD 320

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           GY  AG+   + ++   M   G   P++ T+  L+  +C    + + + +  +M A GM 
Sbjct: 321 GYAKAGEMHTAEEIRGKMISFGCF-PDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMF 379

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P+  TY+ +  A  +     +A E++ ++    + P       +I G+CK GK+ EA+  
Sbjct: 380 PNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVI 439

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              M++    P+ + F +LI G            +   M     +PD IT S++++    
Sbjct: 440 VEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLK 499

Query: 366 AG 367
           AG
Sbjct: 500 AG 501



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 50/206 (24%), Positives = 104/206 (50%), Gaps = 2/206 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++   + G+   A+ I   +I  G  P +VT+T+L+       + N    +  ++   G
Sbjct: 318 LVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARG 377

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           M P++  ++ +INA  +   + +A +   ++    + P    YN +I G+  AGK  E++
Sbjct: 378 MFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAI 437

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +++ M ++   KP+  T+ +L+   C +  + EA ++ HKM A G  PD +T +++ + 
Sbjct: 438 VIVEEMEKK-KCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSC 496

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNG 283
             + G A +A   + ++ H G   +G
Sbjct: 497 LLKAGMAKEAYH-LNQIAHKGQINDG 521


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/500 (23%), Positives = 220/500 (44%), Gaps = 68/500 (13%)

Query: 94  IFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           +F  + E G+  ++  +TTL+     + R ++  S++ +++ N ++PD + +N  I+ F 
Sbjct: 222 LFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFG 281

Query: 154 ESGNMEEAMDTFWKMKESGLT-----------------------------------PTTS 178
           ++G ++ A   F +MK +GL                                    P   
Sbjct: 282 KAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAY 341

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVK---------------------------- 210
            YNT+I GYG+AGK E++  LL+   R+G +                             
Sbjct: 342 AYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM 401

Query: 211 -----PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
                PNL TYN+++   C    +  A  V   M  +G+ P+V+T N +     +    D
Sbjct: 402 KKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLD 461

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
            A  +   ++H   +P+  T   +I G  + G++ EA +    M +    PN V++  LI
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
           + F +   ++   ++   M     +PD++  +T M+    AG ++K + +F ++   G  
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI 581

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           PDA +Y+IL  G V+     +A EL  TM E G   +   + T+I G+C  G +++A ++
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
            ++M   G  P + T+ +++ G ++  +   A  + +  K+ G+      +  L +    
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGK 701

Query: 506 TGLTKEAKRILSKIKNKERT 525
            G   EA  I+ ++  K  T
Sbjct: 702 VGRIDEAYLIMEELMQKGLT 721



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/462 (21%), Positives = 213/462 (46%), Gaps = 7/462 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           M K++   + +   +++ L + GK + A  + + + + G  P+++T   ++  L   +R 
Sbjct: 401 MKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRL 460

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +   SI   ++     PD++ + ++I      G ++EA   + +M ++   P    Y +L
Sbjct: 461 DDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSL 520

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I+ +   G+ E+  K+ + M R G   P+L   N  +        I +   +  ++   G
Sbjct: 521 IRNFFKCGRKEDGHKIYNEMLRLG-CSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLG 579

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
             PD  +Y  +     + G A +A E+   M+  G   + R    +I G+CK GK+ +A 
Sbjct: 580 FIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAY 639

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIM 360
           +    MK  G  P +V +  +I G  +I   D +DE   L +E +   +  +V+ YS+++
Sbjct: 640 QLLEEMKTKGHEPTVVTYGSVIDGLAKI---DRLDEAYMLFEEAKSKGIELNVVIYSSLI 696

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           + +   G +D+   I +++ + G+ P+ + ++ L    V+ +E  +A     +M +    
Sbjct: 697 DGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCT 756

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           PN + ++ +I G C     ++A   + +M + G  PN+ T+ T++ G ++A     A+ +
Sbjct: 757 PNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTL 816

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            +  K  G     + +  + E         +A R+  + + K
Sbjct: 817 FEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLK 858



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/434 (24%), Positives = 202/434 (46%), Gaps = 7/434 (1%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V ++  +++ L +  +  +A +IF  L     +P  VTY +L+  L    R +  + +  
Sbjct: 444 VITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYE 503

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ +    P+++ + ++I  F + G  E+    + +M   G +P     NT +     AG
Sbjct: 504 QMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAG 563

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E+   L   +   G + P+ R+Y +L+          EA+ + + M   G   D   Y
Sbjct: 564 EIEKGRALFQEIKNLGFI-PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAY 622

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           NT+   + ++G+ ++A +++ EM+  G +P   T G +I G  K  ++ EA       K 
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGF 368
            G+  N+VI++ LI GF ++     +DE   +M+E     + P+V T++ +++A   A  
Sbjct: 683 KGIELNVVIYSSLIDGFGKV---GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEE 739

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
           + +    F  M      P+   YSIL  G  + ++  KA      M + GF PNV  +TT
Sbjct: 740 ISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTT 799

Query: 429 IISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFG 488
           +ISG    G++  A  +F+K  E G   +   +  ++ G S A +   A  + +  +  G
Sbjct: 800 MISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKG 859

Query: 489 VHPQKSTFLLLAEA 502
                 T ++L ++
Sbjct: 860 CSIYTKTCVVLLDS 873



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/452 (23%), Positives = 203/452 (44%), Gaps = 2/452 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V S   +++ L  +G+  EA   F  + +    P+L TY  ++  L    +  +   + 
Sbjct: 374 SVVSYNCILSCLGRKGQVDEALKKFEEMKKDA-IPNLSTYNIMIDMLCKAGKLETALVVR 432

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             +++ G+ P+ I  N +++   ++  +++A   F  +      P   TY +LI+G G  
Sbjct: 433 DAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRH 492

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ +E+ KL + M  + N  PN   Y  L+R +       +   + ++M   G  PD++ 
Sbjct: 493 GRVDEAYKLYEQM-LDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLL 551

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
            NT      + GE ++   +  E+++ G  P+ R+  I+I G  K G   EA     TMK
Sbjct: 552 LNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMK 611

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
           E G   +   +N +I GF +    +   ++L  MK     P V+TY ++++  +    +D
Sbjct: 612 EQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLD 671

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
           +   +F++    GI+ +   YS L  G+ +    ++A  ++  +++ G  PNV  +  ++
Sbjct: 672 EAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLL 731

Query: 431 SGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVH 490
                   +  A+  F  M +   +PN  T+  L+ G  + R+  +A    Q M+  G  
Sbjct: 732 DALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFK 791

Query: 491 PQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           P   T+  +       G   EA  +  K K K
Sbjct: 792 PNVFTYTTMISGLAKAGNIVEADTLFEKFKEK 823



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 100/456 (21%), Positives = 194/456 (42%), Gaps = 35/456 (7%)

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
            G  PS  T   ++ +    ++     + +  + +    P    +  +I A S S + + 
Sbjct: 159 AGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDC 218

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
            +  F +M+E G       + TLI+ +   G+ + ++ LLD M +  +++P++  YNV +
Sbjct: 219 MLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEM-KSNSLEPDVVLYNVCI 277

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
             +     +  AW   H+M A+G+  D VTY ++     +    ++A E+   M+ N   
Sbjct: 278 DCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQV 337

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI-----KGFV------ 329
           P       +I GY   GK ++A       +  G  P++V +N ++     KG V      
Sbjct: 338 PCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKK 397

Query: 330 -EIMDRDGVDE----------------------VLALMKEFRVNPDVITYSTIMNAWSTA 366
            E M +D +                        V   MK+  + P+VIT + +++    A
Sbjct: 398 FEEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKA 457

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             +D    IF+ +     +PDA  Y  L +G  R    ++A +L   M+++   PN V++
Sbjct: 458 QRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVY 517

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
           T++I  +   G  +   +++++M   G SP+L    T M    +A +  +   + Q +K 
Sbjct: 518 TSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKN 577

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            G  P   ++ +L       G   EA  +   +K +
Sbjct: 578 LGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQ 613



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 96/439 (21%), Positives = 188/439 (42%), Gaps = 10/439 (2%)

Query: 128 SIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLIKG 186
           S+ +++ E  ++P+      VI       ++  A++ F W  + +        YN+L+  
Sbjct: 83  SVENRLAELDLNPNP---ELVIGVLRRLKDVNNAVNYFRWAERLTDRAHCREAYNSLLMV 139

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
                K     ++L+ MS  G   P+  T   +V ++   + + EA+  +  M     +P
Sbjct: 140 MARTRKFNCLEQILEEMSIAG-FGPSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRP 198

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
               Y  +  A + + ++D    +  +M+  G   N      +I  + +EG++  AL   
Sbjct: 199 AFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLL 258

Query: 307 RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTA 366
             MK   + P++V++N+ I  F +    D   +    MK   +  D +TY++++     A
Sbjct: 259 DEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKA 318

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
             +++  E+F+ M +    P A+AY+ +  GY    + E A  LL      G  P+VV +
Sbjct: 319 DRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSY 378

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
             I+S     G +D A++ F++M +  + PNL T+  ++    +A +   A  +   MK 
Sbjct: 379 NCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALVVRDAMKD 437

Query: 487 FGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKE 546
            G+ P   T  ++ +         +A  I   + +K    +      + +E L R    +
Sbjct: 438 AGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSL-IEGLGRHGRVD 496

Query: 547 ATTASYPNLL---QIPNVV 562
                Y  +L   QIPN V
Sbjct: 497 EAYKLYEQMLDANQIPNAV 515



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/241 (23%), Positives = 105/241 (43%), Gaps = 1/241 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   +++ L +  +  EA  +F      G + ++V Y++L+       R +  + IM
Sbjct: 653 TVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIM 712

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++ + G+ P+   +N +++A  ++  + EA+  F  MK+   TP   TY+ LI G    
Sbjct: 713 EELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKI 772

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
            K  ++      M ++G  KPN+ TY  ++       NI EA  +  K    G   D   
Sbjct: 773 RKFNKAFVFWQEMQKQG-FKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAI 831

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           YN I    +    A  A  +  E    G     +TC +++    K   I++A      ++
Sbjct: 832 YNAIIEGLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQAAIVGAVLR 891

Query: 311 E 311
           E
Sbjct: 892 E 892


>gi|15240249|ref|NP_200948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171473|sp|Q9FLJ4.1|PP440_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g61400
 gi|9757861|dbj|BAB08495.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010079|gb|AED97462.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 654

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 208/438 (47%), Gaps = 7/438 (1%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L     ++G   + + + + +   G KP++  YT  +  L    +      +   ++++G
Sbjct: 205 LFQCCFKQGLYSKKEKLLDEMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHG 264

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+   ++A+I+ + ++GN+ +A   + ++  + L P    + TL+ G+  A +   + 
Sbjct: 265 VLPNLYTYSAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTAR 324

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L   M + G V PNL  YN L+   C   N+ EA  ++ +M +  + PDV TY  +   
Sbjct: 325 SLFVHMVKFG-VDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILING 383

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
                +  +A  +  +M++  + P+  T   +I GYCKE  +++AL     M   GV PN
Sbjct: 384 LCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPN 443

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKE 374
           ++ F+ LI G+  + D   +   + L  E  +    PDV+TY+ +++A      M +   
Sbjct: 444 IITFSTLIDGYCNVRD---IKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALR 500

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           ++ DM +AGI P+ H ++ L  G+ +E     A +      +     N V FT +I G C
Sbjct: 501 LYSDMLEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLC 560

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +G + RA   F  M   G++P++ ++ +++ G+ + ++      +   M   G+ P   
Sbjct: 561 QNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIKTGILPNLL 620

Query: 495 TFLLLAEARRATGLTKEA 512
              LLA   +A G  K A
Sbjct: 621 VNQLLARFYQANGYVKSA 638



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 196/426 (46%), Gaps = 3/426 (0%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           ++   ++N L+ R +       +  +I  G  P +  Y  L      Q  ++    ++ +
Sbjct: 165 KACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDE 224

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +   G+ P+   +   I        MEEA   F  MK+ G+ P   TY+ +I GY   G 
Sbjct: 225 MTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGN 284

Query: 193 PEESVKLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             ++  L  +++  E  + PN+  +  LV  +C  + +  A ++   M   G+ P++  Y
Sbjct: 285 VRQAYGLYKEILVAE--LLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVY 342

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +   + ++G   +A  ++ EME   + P+  T  I+I+G C E ++ EA R  + MK 
Sbjct: 343 NCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKN 402

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             + P+   +N LI G+ +  + +   ++ + M    V P++IT+ST+++ +     +  
Sbjct: 403 ERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKA 462

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              ++ +M   GI PD   Y+ L   + +E   ++A  L   M+E+G HPN   F  ++ 
Sbjct: 463 AMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHPNDHTFACLVD 522

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+  +G +  AI+ + +  +     N   F  L+ G  +     RA      M++ G+ P
Sbjct: 523 GFWKEGRLSVAIDFYQENNQQRSCWNHVGFTCLIEGLCQNGYILRASRFFSDMRSCGITP 582

Query: 492 QKSTFL 497
              +++
Sbjct: 583 DICSYV 588



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 195/442 (44%), Gaps = 15/442 (3%)

Query: 78  LMNSLIERGK----PQEAQAIFNNLIEGGHKP--SLVTYTTLLAALTIQKRFNSIHSIMS 131
           L+ SLIER K    P        N +E    P  S+  ++ L+        F     +  
Sbjct: 97  LIKSLIERLKRHSEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSR 156

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           +++     PDS    +++N        +     +  M   GL P    Y  L +     G
Sbjct: 157 EMK---CSPDSKACLSILNGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQG 213

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              +  KLLD M+  G +KPN+  Y + +   C +  + EA  +   M   G+ P++ TY
Sbjct: 214 LYSKKEKLLDEMTSLG-IKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTY 272

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           + +   Y + G   QA  +  E+    + PN    G ++ G+CK  ++  A      M +
Sbjct: 273 SAMIDGYCKTGNVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVK 332

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           +GV PNL ++N LI G  +  +      +L+ M+   ++PDV TY+ ++N       + +
Sbjct: 333 FGVDPNLYVYNCLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAE 392

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              +F  M    I P +  Y+ L  GY +E   E+A +L   M  SG  PN++ F+T+I 
Sbjct: 393 ANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLID 452

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHP 491
           G+C+   +  A+ ++ +M   G+ P++ T+  L+  + +      A  +   M   G+HP
Sbjct: 453 GYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDMLEAGIHP 512

Query: 492 QKSTFLLLAEARRATGLTKEAK 513
              TF  L +     G  KE +
Sbjct: 513 NDHTFACLVD-----GFWKEGR 529



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 217/462 (46%), Gaps = 18/462 (3%)

Query: 69  CRTVRSMTKLM----NSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ-KRF 123
           CR+     KL      S + +    ++ +   +++ G HK +L     L+ +L  + KR 
Sbjct: 51  CRSAEEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLAR--CLIKSLIERLKRH 108

Query: 124 ----NSIHSIMSQVEENGMDPDSI-FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
               N  H + + +E+      SI  F+ +I  F E G  EEA+   W  +E   +P + 
Sbjct: 109 SEPSNMSHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEAL---WVSREMKCSPDSK 165

Query: 179 TYNTLIKGYGIAGKPEESVKL-LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
              +++ G  +  +  +SV +   LM   G V P++  Y VL +    +   ++   ++ 
Sbjct: 166 ACLSILNGL-VRRRRFDSVWVDYQLMISRGLV-PDVHIYFVLFQCCFKQGLYSKKEKLLD 223

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
           +M + G+KP+V  Y        ++ + ++AE++   M+ +GV PN  T   +I GYCK G
Sbjct: 224 EMTSLGIKPNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTG 283

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYS 357
            +++A    + +    + PN+V+F  L+ GF +  +      +   M +F V+P++  Y+
Sbjct: 284 NVRQAYGLYKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYN 343

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
            +++    +G M +   +  +M    + PD   Y+IL  G   E +  +A  L   M   
Sbjct: 344 CLIHGHCKSGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNE 403

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
              P+   + ++I G+C + +M++A+++  +M   GV PN+ TF TL+ GY   R    A
Sbjct: 404 RIFPSSATYNSLIHGYCKEYNMEQALDLCSEMTASGVEPNIITFSTLIDGYCNVRDIKAA 463

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             +   M   G+ P   T+  L +A       KEA R+ S +
Sbjct: 464 MGLYFEMTIKGIVPDVVTYTALIDAHFKEANMKEALRLYSDM 505



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/353 (21%), Positives = 157/353 (44%), Gaps = 26/353 (7%)

Query: 194 EESVKLLDLMSREGNVKPN-LRTYNVLVR----------AWCNEKNITEAW-------NV 235
           EE+ KL +  SR    K N L++++ ++           A C  K++ E         N+
Sbjct: 55  EEAFKLFETSSRSRVSKSNDLQSFSAVIHVLTGAHKYTLARCLIKSLIERLKRHSEPSNM 114

Query: 236 MHKMAAS-----GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIII 290
            H++  +       K  +  ++ +   + + G  ++A  V  EM+     P+ + C  I+
Sbjct: 115 SHRLFNALEDIQSPKFSIGVFSLLIMEFLEMGLFEEALWVSREMK---CSPDSKACLSIL 171

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
           +G  +  +        + M   G+ P++ I+ +L +   +       +++L  M    + 
Sbjct: 172 NGLVRRRRFDSVWVDYQLMISRGLVPDVHIYFVLFQCCFKQGLYSKKEKLLDEMTSLGIK 231

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P+V  Y+  +        M++ +++F+ M K G+ P+ + YS +  GY +     +A  L
Sbjct: 232 PNVYIYTIYILDLCRDNKMEEAEKMFELMKKHGVLPNLYTYSAMIDGYCKTGNVRQAYGL 291

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
              ++ +   PNVV+F T++ G+C    +  A  +F  M + GV PNL  +  L+ G+ +
Sbjct: 292 YKEILVAELLPNVVVFGTLVDGFCKARELVTARSLFVHMVKFGVDPNLYVYNCLIHGHCK 351

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKE 523
           +     A  +L  M++  + P   T+ +L           EA R+  K+KN+ 
Sbjct: 352 SGNMLEAVGLLSEMESLNLSPDVFTYTILINGLCIEDQVAEANRLFQKMKNER 404



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/257 (22%), Positives = 116/257 (45%), Gaps = 1/257 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L+N L    +  EA  +F  +      PS  TY +L+     +        + S
Sbjct: 374 VFTYTILINGLCIEDQVAEANRLFQKMKNERIFPSSATYNSLIHGYCKEYNMEQALDLCS 433

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++  +G++P+ I F+ +I+ +    +++ AM  +++M   G+ P   TY  LI  +    
Sbjct: 434 EMTASGVEPNIITFSTLIDGYCNVRDIKAAMGLYFEMTIKGIVPDVVTYTALIDAHFKEA 493

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+++L   M  E  + PN  T+  LV  +  E  ++ A +   +        + V +
Sbjct: 494 NMKEALRLYSDM-LEAGIHPNDHTFACLVDGFWKEGRLSVAIDFYQENNQQRSCWNHVGF 552

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             +     QNG   +A     +M   G+ P+  +   ++ G+ +E +I + +     M +
Sbjct: 553 TCLIEGLCQNGYILRASRFFSDMRSCGITPDICSYVSMLKGHLQEKRITDTMMLQCDMIK 612

Query: 312 YGVHPNLVIFNLLIKGF 328
            G+ PNL++  LL + +
Sbjct: 613 TGILPNLLVNQLLARFY 629


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/554 (24%), Positives = 240/554 (43%), Gaps = 54/554 (9%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T++++ L E    +EA    + +      P++VTY  LL     +++      I+S +  
Sbjct: 303 TQMISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMIT 362

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE- 194
            G  P    FN++I+A+  SG+   A     KM + G  P    YN LI   GI G  + 
Sbjct: 363 EGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIG--GICGNEKL 420

Query: 195 ESVKLLDLMSR------EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
            S+ +L+L  +      + +V  N    + L R  C      +A++++ +M + G  PD 
Sbjct: 421 PSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDT 480

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TY+ +        + D A  +  EM+ N V P+  T  I+I  +CK G +++A ++   
Sbjct: 481 STYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDE 540

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M   G  PN+V +  LI  +++       +E+  +M      P+V+TY+ +++    +G 
Sbjct: 541 MVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQ 600

Query: 369 MDKCKEIFDDM-GKAGI---------------KPDAHAYSILAKGYVREQEPEKAEELLM 412
           ++K  +I+  M G A I                P+   Y  L  G  +  + ++A +LL 
Sbjct: 601 IEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLD 660

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M   G  PN +++  +I G+C  G +D A  VF KM E G  PN+ T+ +L+    + +
Sbjct: 661 VMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDK 720

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEE 532
           +   A ++L  M      P    +  + +     G T EA R++S ++ K          
Sbjct: 721 RLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEK---------- 770

Query: 533 DIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLLRDADSSLECSWF 592
                              +PN++    ++  D  G A  + K   L+R   +      F
Sbjct: 771 -----------------GCHPNVVTYTAMI--DGFGKAGKVDKCLELMRQMGAKGCAPNF 811

Query: 593 ATTSMYLSHSCKSG 606
            T  + ++H C +G
Sbjct: 812 VTYRVLINHCCAAG 825



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 120/483 (24%), Positives = 217/483 (44%), Gaps = 30/483 (6%)

Query: 64  MNKESCRTVRSMTKLMNSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI 119
           M  E C   R   ++ NSLI      G    A  +   + + G +P  V Y  L+  +  
Sbjct: 360 MITEGCYPSR---RIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICG 416

Query: 120 QKRFNSIHSI-MSQVEENGMDPDSIFFNAV-----INAFSESGNMEEAMDTFWKMKESGL 173
            ++  S+  + +++     M    +  N V           +G  E+A     +M   G 
Sbjct: 417 NEKLPSLDVLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGF 476

Query: 174 TPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAW 233
            P TSTY+ +I     A K + +  L + M +  +V P++ TY +L+ ++C    + +A 
Sbjct: 477 IPDTSTYSKVIGLLCNASKVDNAFLLFEEM-KSNHVVPDVFTYTILIDSFCKVGLLQQAR 535

Query: 234 NVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGY 293
               +M   G  P+VVTY  +  AY +  +   A E+   M   G  PN  T   +I G+
Sbjct: 536 KWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGH 595

Query: 294 CKEGKIKEALR-FARTMKEYGV---------------HPNLVIFNLLIKGFVEIMDRDGV 337
           CK G+I++A + +AR      +                PN+  +  L+ G  +       
Sbjct: 596 CKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEA 655

Query: 338 DEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
            ++L +M      P+ I Y  +++ +   G +D+ + +F  M + G  P+ + YS L   
Sbjct: 656 RDLLDVMSVEGCEPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDR 715

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPN 457
             +++  + A ++L  M+E+   PNV+I+T +I G C  G  D A  +   M E G  PN
Sbjct: 716 LFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPN 775

Query: 458 LKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILS 517
           + T+  ++ G+ +A +  +  E+++ M A G  P   T+ +L     A GL  +A ++L 
Sbjct: 776 VVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLD 835

Query: 518 KIK 520
           ++K
Sbjct: 836 EMK 838



 Score =  166 bits (420), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 211/466 (45%), Gaps = 61/466 (13%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++S  + G  Q+A+  F+ ++  G  P++VTYT L+ A    ++ +S + +  
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEA---------------MDTFWKMKESGL-TP 175
            +   G  P+ + + A+I+   +SG +E+A               +D ++K+ +  +  P
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKIDDGNIRDP 634

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
              TY  L+ G   A K +E+  LLD+MS EG  +PN   Y+ L+  +C    + EA  V
Sbjct: 635 NIFTYGALVDGLCKAHKVKEARDLLDVMSVEG-CEPNHIVYDALIDGFCKVGKLDEAQMV 693

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
             KM+  G  P+V TY+++     ++   D A +V+  M  N   PN      +I G CK
Sbjct: 694 FTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCK 753

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PD 352
            GK  EA R    M+E G HPN+V +  +I GF +      VD+ L LM++       P+
Sbjct: 754 VGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGK---AGKVDKCLELMRQMGAKGCAPN 810

Query: 353 VITYSTIMNAWSTAGFMDKCKEIFDDMGK-------AGIK-------------------- 385
            +TY  ++N    AG +D   ++ D+M +       AG +                    
Sbjct: 811 FVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEI 870

Query: 386 ------PDAHAYSILAKGYVREQEPEKAEELL--MTMIESGFHPNVVIFTTIISGWCSDG 437
                 P   AY IL   + +    E A EL   M+   S    +  +++++I       
Sbjct: 871 AENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLAS 930

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
            +D+A E++  M + G  P L  F  L+ G        R EE LQ+
Sbjct: 931 KVDKAFELYADMIKRGGIPELSIFFYLVKGLIRIN---RWEEALQL 973



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/506 (23%), Positives = 212/506 (41%), Gaps = 59/506 (11%)

Query: 75  MTKLMNSLIER----GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           + KL+N LI +    G    A      L + G+KPS +TY  L+       R ++ + + 
Sbjct: 196 LGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVH 255

Query: 131 SQVEENGMD--------------------------------PDSIFFNAVINAFSESGNM 158
            ++ ++G +                                 D++ +  +I+   E+   
Sbjct: 256 REMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEKEEFKLDTVIYTQMISGLCEASLF 315

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
           EEAMD   +M+ S   P   TY  L+ G     +     ++L +M  EG   P+ R +N 
Sbjct: 316 EEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEG-CYPSRRIFNS 374

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE------ADQAEEVIV 272
           L+ A+C   + + A+ ++ KM   G +P  V YN +      N +       + AE+   
Sbjct: 375 LIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLDVLELAEKAYG 434

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           EM    V  N      +    C  GK ++A    R M   G  P+   ++ +I       
Sbjct: 435 EMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNAS 494

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
             D    +   MK   V PDV TY+ +++++   G + + ++ FD+M + G  P+   Y+
Sbjct: 495 KVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYT 554

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM--- 449
            L   Y++ ++   A EL   M+  G  PNVV +T +I G C  G +++A +++ +M   
Sbjct: 555 ALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGN 614

Query: 450 -----------CEHG--VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
                       + G    PN+ T+  L+ G  +A +   A ++L +M   G  P    +
Sbjct: 615 ADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674

Query: 497 LLLAEARRATGLTKEAKRILSKIKNK 522
             L +     G   EA+ + +K+  +
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSER 700



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 105/458 (22%), Positives = 195/458 (42%), Gaps = 25/458 (5%)

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++++ G  P  + +NA++  F E+  ++ A     +M +SG      T    +     
Sbjct: 220 LGRLKDLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGFNMDGYTLGCFVHLLCK 279

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           AG+  E++ L++    +   K +   Y  ++   C      EA + + +M +S   P+VV
Sbjct: 280 AGRWREALALIE----KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSRMRSSSCIPNVV 335

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +     +  +  + + ++  M   G  P+ R    +I  YC+ G    A +  + M
Sbjct: 336 TYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGDYSYAYKLLKKM 395

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL-------MKEFRVNPDVITYSTIMNA 362
            + G  P  V++N+LI G         +D VL L       M +  V  + +  S +   
Sbjct: 396 GDCGCQPGYVVYNILIGGICGNEKLPSLD-VLELAEKAYGEMLDAHVVLNKVNVSNLARC 454

Query: 363 WSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN 422
              AG  +K   I  +M   G  PD   YS +        + + A  L   M  +   P+
Sbjct: 455 LCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLFEEMKSNHVVPD 514

Query: 423 VVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           V  +T +I  +C  G + +A + FD+M   G +PN+ T+  L+  Y +AR+   A E+ +
Sbjct: 515 VFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELFE 574

Query: 483 IMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERL 542
           +M + G  P   T+  L +    +G  ++A +I ++         M    DIP   ++  
Sbjct: 575 MMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYAR---------MRGNADIP--DVDMY 623

Query: 543 YHKEATTASYPNLLQIPNVVSSDQKGSAAALKKGRMLL 580
           +  +      PN+     +V  D    A  +K+ R LL
Sbjct: 624 FKIDDGNIRDPNIFTYGALV--DGLCKAHKVKEARDLL 659



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 102/468 (21%), Positives = 182/468 (38%), Gaps = 64/468 (13%)

Query: 148 VINAFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLIKGYGIAGK---PEESVKLLDLM 203
           V++  S   N E  +  F W  ++ G   T   Y+ L++  G  G    PE+ ++ +   
Sbjct: 132 VVDVLSLVKNPELGVKFFIWAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREI--- 188

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            R+ + +   +  NVL+R  C       A   + ++   G KP  +TYN +   + +   
Sbjct: 189 -RDEDKEILGKLLNVLIRKCCRNGLWNVALEELGRLKDLGYKPSRLTYNALVRVFLEADR 247

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D A  V  EM  +G   +G T G  +   CK G+ +EAL      +E+ +  + VI+  
Sbjct: 248 LDTAYLVHREMSDSGFNMDGYTLGCFVHLLCKAGRWREALALIEK-EEFKL--DTVIYTQ 304

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           +I G  E    +   + L+ M+     P+V+TY  ++        + +CK I   M   G
Sbjct: 305 MISGLCEASLFEEAMDFLSRMRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEG 364

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD------- 436
             P    ++ L   Y R  +   A +LL  M + G  P  V++  +I G C +       
Sbjct: 365 CYPSRRIFNSLIHAYCRSGDYSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLPSLD 424

Query: 437 ----------------------------------GSMDRAIEVFDKMCEHGVSPNLKTFE 462
                                             G  ++A  +  +M   G  P+  T+ 
Sbjct: 425 VLELAEKAYGEMLDAHVVLNKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYS 484

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            ++     A +   A  + + MK+  V P   T+ +L ++    GL ++A++        
Sbjct: 485 KVIGLLCNASKVDNAFLLFEEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFD----- 539

Query: 523 ERTNEMEAEEDIPVESLERLYHKEATTASYPNLLQ-------IPNVVS 563
           E   +  A   +   +L   Y K    +S   L +       IPNVV+
Sbjct: 540 EMVRDGCAPNVVTYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVT 587



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/269 (19%), Positives = 116/269 (43%), Gaps = 34/269 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + + L++ L +  +   A  + + ++E    P+++ YT ++  L    + +  + +MS
Sbjct: 706 VYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMS 765

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +EE G  P+ + + A+I+ F ++G +++ ++   +M   G  P   TY  LI     AG
Sbjct: 766 MMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAG 825

Query: 192 KPEESVKLLDLMSR--------------------------------EGNVKPNLRTYNVL 219
             +++ +LLD M +                                E    P +  Y +L
Sbjct: 826 LLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRIL 885

Query: 220 VRAWCNEKNITEAWNVMHKMAA--SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHN 277
           + ++C    +  A  +  +M++  S    D   Y+++  + +   + D+A E+  +M   
Sbjct: 886 IDSFCKAGRLELALELHKEMSSCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKR 945

Query: 278 GVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           G  P       ++ G  +  + +EAL+ +
Sbjct: 946 GGIPELSIFFYLVKGLIRINRWEEALQLS 974


>gi|224083253|ref|XP_002306972.1| predicted protein [Populus trichocarpa]
 gi|222856421|gb|EEE93968.1| predicted protein [Populus trichocarpa]
          Length = 709

 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 215/433 (49%), Gaps = 3/433 (0%)

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           +F +++    T  +   L+++       ++A  +   + + G+    V Y+ ++ +L  +
Sbjct: 187 AFLLSQRQNLTPLTYNALISACARNNDLEKALNLITRMRQDGYPSDFVNYSLIIRSLMRK 246

Query: 121 KRFNS--IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
            R +S  +  +  ++E + ++ D    N +I  F+++G++ +A++    ++ SGL+  T+
Sbjct: 247 NRVDSAILQKLYREIECDKLELDVQLSNDIIVGFAKAGDLSKALEFLGVVQGSGLSVKTA 306

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           T   +I   G  G+  E+  + + M R+  +KP  R YN L+R +     + +A  V+ +
Sbjct: 307 TLVAVIWALGNCGRTVEAEAIFEEM-RDNGLKPRTRAYNALLRGYVKAGLLKDAEFVVSE 365

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  SG+ P+  TY+ +  AY   G  + A  V+ EME + VQPN      I+S Y  +G+
Sbjct: 366 MERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEMEASNVQPNAYVFSRILSSYRDKGE 425

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
            +++ +  R M+  GV P+ V +N++I  F +    D        M    + PD +T++T
Sbjct: 426 WQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDRMLSEGIEPDTVTWNT 485

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++    AG  D+ +E+F++M + G  P    ++I+   +  ++  +  + LL  M   G
Sbjct: 486 LIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQERWDDVKNLLAHMRSQG 545

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PN V +TT+I  +   G  + AIE  D M   G+ P+   +  L+  Y++     +A 
Sbjct: 546 LVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAV 605

Query: 479 EILQIMKAFGVHP 491
              + M+  G+ P
Sbjct: 606 SAFRAMRVDGLKP 618



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/418 (25%), Positives = 198/418 (47%), Gaps = 2/418 (0%)

Query: 95  FNNLIEG-GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFS 153
           F  +++G G      T   ++ AL    R     +I  ++ +NG+ P +  +NA++  + 
Sbjct: 292 FLGVVQGSGLSVKTATLVAVIWALGNCGRTVEAEAIFEEMRDNGLKPRTRAYNALLRGYV 351

Query: 154 ESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNL 213
           ++G +++A     +M+ SG++P   TY+ LI  YG AG+ E +  +L  M    NV+PN 
Sbjct: 352 KAGLLKDAEFVVSEMERSGVSPNEQTYSFLIDAYGNAGRWESARIVLKEM-EASNVQPNA 410

Query: 214 RTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVE 273
             ++ ++ ++ ++    +++ V+ +M  SG++PD V YN +   + +    D A      
Sbjct: 411 YVFSRILSSYRDKGEWQKSFQVLREMENSGVRPDRVFYNVMIDTFGKFNCLDHAMATFDR 470

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M   G++P+  T   +I  +C+ GK   A      M E G  P    FN++I  F +   
Sbjct: 471 MLSEGIEPDTVTWNTLIDCHCRAGKHDRAEELFEEMMEGGYSPCNTTFNIMINSFGDQER 530

Query: 334 RDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSI 393
            D V  +LA M+   + P+ +TY+T+++ +  +G  +   E  DDM  AG+KP +  Y+ 
Sbjct: 531 WDDVKNLLAHMRSQGLVPNSVTYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNA 590

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L   Y +    E+A      M   G  P+++   ++I+ +  D     A  V   M E+ 
Sbjct: 591 LINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKEND 650

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKE 511
           + P++ T+ TLM       +  +   + + M   G  P +    +L  A +    T E
Sbjct: 651 LKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILSGCTPDRKARAMLRSALKYMKQTLE 708



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/113 (28%), Positives = 51/113 (45%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           + T L++   + G+  +A    +++   G KPS   Y  L+ A   +       S    +
Sbjct: 552 TYTTLIDIYGKSGRFNDAIECLDDMKAAGLKPSSTMYNALINAYAQRGLSEQAVSAFRAM 611

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
             +G+ P  +  N++INAF E     EA      MKE+ L P   TY TL+K 
Sbjct: 612 RVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKA 664



 Score = 46.2 bits (108), Expect = 0.049,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 49/98 (50%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N+  +RG  ++A + F  +   G KPSL+   +L+ A    +R     +++  ++EN 
Sbjct: 591 LINAYAQRGLSEQAVSAFRAMRVDGLKPSLLALNSLINAFGEDRRDAEAFTVLQYMKEND 650

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTP 175
           + PD + +  ++ A       ++    + +M  SG TP
Sbjct: 651 LKPDVVTYTTLMKALIRVEKFDKVPSVYEEMILSGCTP 688



 Score = 42.4 bits (98), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 21/71 (29%), Positives = 40/71 (56%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           ++ ++  L+N+  E  +  EA  +   + E   KP +VTYTTL+ AL   ++F+ + S+ 
Sbjct: 619 SLLALNSLINAFGEDRRDAEAFTVLQYMKENDLKPDVVTYTTLMKALIRVEKFDKVPSVY 678

Query: 131 SQVEENGMDPD 141
            ++  +G  PD
Sbjct: 679 EEMILSGCTPD 689


>gi|449449679|ref|XP_004142592.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Cucumis sativus]
 gi|449516715|ref|XP_004165392.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Cucumis sativus]
          Length = 594

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 200/406 (49%), Gaps = 3/406 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           ++   +   +  +A  +   ++  G  P ++TY  ++  L  Q    S   +++ +  +G
Sbjct: 178 MIRGFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSG 237

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMK-ESGLTPTTSTYNTLIKGYGIAGKPEES 196
             PD I +NAVI    ++G  ++A++ FWK +   G  P   TY  LI+          +
Sbjct: 238 CPPDVITYNAVIRHMFDNGCFDQAVE-FWKEQLRKGTPPYLITYTILIELVWKHRGTVCA 296

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           +++L+ M+ EG   P+L TYN L+   C +    +A  V+  +   GM PD VTYNT+  
Sbjct: 297 LEVLEEMANEG-CYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLH 355

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           + ++ G  D+ +E++  M  +   P   TC ++I+G CK G +  A+ F   M  Y   P
Sbjct: 356 SLSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLP 415

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +++ +N L+    +    D   ++L L+ +   +P +I+Y+T+++  S  G+MDK   ++
Sbjct: 416 DIITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLY 475

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             M + GI PD   +  +  G+ R  +  +A E L  +++ G+  N   +  ++   C +
Sbjct: 476 SQMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLN 535

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
             +D AI+V + M       N   + T++   + A    +A+E+ Q
Sbjct: 536 KKVDLAIQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQ 581



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 164/354 (46%), Gaps = 1/354 (0%)

Query: 148 VINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
           +I  F  +  M++A+     M  SG  P   TYN +I      G  E +++LL+ MS  G
Sbjct: 178 MIRGFVNTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSG 237

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
              P++ TYN ++R   +     +A     +    G  P ++TY  +     ++     A
Sbjct: 238 -CPPDVITYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCA 296

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
            EV+ EM + G  P+  T   +I+  CK+GK ++A      +  +G+ P+ V +N L+  
Sbjct: 297 LEVLEEMANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHS 356

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
                  D VDE+L +M      P V+T + ++N     G +D      + M      PD
Sbjct: 357 LSRRGHWDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPD 416

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
              Y+ L     +E   ++A +LL  + ++   P ++ + T++ G    G MD+A+ ++ 
Sbjct: 417 IITYNTLLGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYS 476

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           +M E+G+ P+  T  +++WG+  + +   A E L+ +   G     S + +L  
Sbjct: 477 QMMENGIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVH 530



 Score =  122 bits (305), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 79/341 (23%), Positives = 156/341 (45%), Gaps = 1/341 (0%)

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           T N +++ +   GK  E+ +++D+M+    + P+      ++R + N   + +A  V+  
Sbjct: 139 TNNVILQKFCYKGKLMEASRVVDIMASRNQI-PDFECCINMIRGFVNTDRMDKAVQVLKI 197

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  SG  PD++TYN +     + G  + A E++ +M  +G  P+  T   +I      G 
Sbjct: 198 MVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHMFDNGC 257

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
             +A+ F +     G  P L+ + +LI+   +        EVL  M      PD++TY++
Sbjct: 258 FDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEMANEGCYPDLVTYNS 317

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++N     G  +    + D++   G+ PDA  Y+ L     R    ++ +E+L  M  S 
Sbjct: 318 LINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHWDEVDEILKIMSISL 377

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             P VV    +I+G C +G +D AI   ++M  +   P++ T+ TL+    +      A 
Sbjct: 378 QPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTLLGALCKEGMVDEAF 437

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           ++L ++      P   ++  + +     G   +A  + S++
Sbjct: 438 QLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQM 478



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/287 (22%), Positives = 135/287 (47%), Gaps = 2/287 (0%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  E C   + +   L+N   ++GK ++A  + +NL+  G  P  VTY TLL +L+ +  
Sbjct: 303 MANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGH 362

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           ++ +  I+  +  +   P  +  N +IN   ++G ++ A++   +M      P   TYNT
Sbjct: 363 WDEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNT 422

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           L+      G  +E+ +LL L++ +    P L +YN ++     +  + +A ++  +M  +
Sbjct: 423 LLGALCKEGMVDEAFQLLHLLT-DTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMEN 481

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+ PD  T+ +I   + ++ +  +A E +  +   G + N     I++   C   K+  A
Sbjct: 482 GIIPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLA 541

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRV 349
           ++    M       N  I++ +I        ++  DE+   + E++V
Sbjct: 542 IQVLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKV 588



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/180 (22%), Positives = 79/180 (43%), Gaps = 12/180 (6%)

Query: 349 VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAE 408
           V  D  T + I+  +   G + +   + D M      PD      + +G+V     +KA 
Sbjct: 133 VGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFVNTDRMDKAV 192

Query: 409 ELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM--- 465
           ++L  M+ SG  P+++ +  +I   C  G ++ AIE+ + M   G  P++ T+  ++   
Sbjct: 193 QVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVITYNAVIRHM 252

Query: 466 ---WGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
                + +A + W+     Q+ K  G  P   T+ +L E       T  A  +L ++ N+
Sbjct: 253 FDNGCFDQAVEFWKE----QLRK--GTPPYLITYTILIELVWKHRGTVCALEVLEEMANE 306


>gi|302784330|ref|XP_002973937.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
 gi|300158269|gb|EFJ24892.1| hypothetical protein SELMODRAFT_100758 [Selaginella moellendorffii]
          Length = 823

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 219/464 (47%), Gaps = 37/464 (7%)

Query: 69  CRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHS 128
           C    +   L++   + G  +EA  +   +   G  P++VTY  L+AA       +   +
Sbjct: 316 CPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAA 375

Query: 129 IMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYG 188
           +   +   G+ PD   +  +I+AF+ +   E+A++TF +M+++  TP   TYN LI  YG
Sbjct: 376 LKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYG 435

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
              K ++ +K+   M +E N  P+L T+N L++++ N   +TE  NV  +M  +G  P V
Sbjct: 436 RMEKLDDMMKVFKFM-QEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGV 494

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            T+N +   Y + G  D + ++   +   G+QP   T   +++   +EG+ ++  + ++ 
Sbjct: 495 DTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQE 554

Query: 309 MKEYGV------HPNLV--------------------------IFNLLIKGFVEIMDRDG 336
           M E G+      H  L+                          +  +L K FV    + G
Sbjct: 555 MAEAGLQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCG 614

Query: 337 VD-EVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
           +D E    + +   N   PD+  ++ +++  +  G++++  ++ +++ KA +KPD   Y+
Sbjct: 615 MDNEAQLALNQLYDNGHSPDIKVFNAMISMCAKRGWIERAVKLLEEIRKAQLKPDGVTYN 674

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            L   Y RE    KAEE++  M  +G  PN++ + T++  +   G MD A  VF  M   
Sbjct: 675 CLMSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAA 734

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            V P+  TF TL+  YS       A  +++ M   G  P + TF
Sbjct: 735 RVRPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITF 778



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 198/417 (47%), Gaps = 8/417 (1%)

Query: 64  MNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRF 123
           ++K  C    +   L+++     + ++A   F  + +    P++VTY  L+      ++ 
Sbjct: 381 LSKGLCPDEFTYCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKL 440

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           + +  +   ++E    PD + +N+++ +F   G + E  + F +MK +G  P   T+N L
Sbjct: 441 DDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNIL 500

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           I+ YG  G  + SV +   + R G ++P + T+  L+ +   E    +   V  +MA +G
Sbjct: 501 IECYGRCGYVDYSVDIYKGLLRTG-LQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAG 559

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQP-NGRTCGIIISGYCKEGKIKEA 302
           ++     +  +  +YA +G+  Q  + I E+E +  QP +G  C   +  YCK G   EA
Sbjct: 560 LQLSDACHAGLIHSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVLAYCKCGMDNEA 619

Query: 303 LRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR---VNPDVITYSTI 359
                 + + G  P++ +FN +I    +   R  ++  + L++E R   + PD +TY+ +
Sbjct: 620 QLALNQLYDNGHSPDIKVFNAMISMCAK---RGWIERAVKLLEEIRKAQLKPDGVTYNCL 676

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           M+ +   G   K +E+  +M +AG  P+   Y+ L   Y +    + A  +   M+ +  
Sbjct: 677 MSMYGREGMYYKAEEVMSEMRRAGKAPNLITYNTLLYSYTKHGRMDDAARVFGDMVAARV 736

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            P+   F T++  + S G    A+ V + M EHG  P   TF+ L+ GY+    P R
Sbjct: 737 RPDNFTFNTLVGSYSSLGLYKEALSVIEYMTEHGCQPTQITFKALLDGYNRNASPSR 793



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/420 (22%), Positives = 211/420 (50%), Gaps = 9/420 (2%)

Query: 107 LVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT-F 165
           +  YT+L++ L+  +RF+   ++   ++  G   +++ +N +++ + + G+  + + + F
Sbjct: 213 VYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLF 272

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
            +MK+  ++P   TYNT+I         +E+++L   M +E    PN  TYN L+  +  
Sbjct: 273 QEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEM-KEAGCCPNRVTYNALLDVYGK 331

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
                EA  ++ +M A+G+ P++VTYN +  AYA+ G  D+A  +   +   G+ P+  T
Sbjct: 332 GGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFT 391

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
              +IS + +  + ++AL     M++    PN+V +N+LI  +  +   D + +V   M+
Sbjct: 392 YCTLISAFNRAERYEKALETFTEMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQ 451

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           E    PD++T+++++ ++   G + +   +F +M +AG  P    ++IL + Y R    +
Sbjct: 452 EKNCTPDLVTWNSLLKSFGNCGMLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVD 511

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
            + ++   ++ +G  P V  F  +++    +G   +  +V  +M E G+  +      L+
Sbjct: 512 YSVDIYKGLLRTGLQPTVPTFAALMASLAREGRWQQCEKVSQEMAEAGLQLSDACHAGLI 571

Query: 466 WGYSEARQPWRAEEILQIMKAFGVHPQKS----TFLLLAEARRATGLTKEAKRILSKIKN 521
             Y+ + Q ++  + +  ++     P       TF+L   A    G+  EA+  L+++ +
Sbjct: 572 HSYANSGQFFQLRKYIDELEKSAKQPLSGILCKTFVL---AYCKCGMDNEAQLALNQLYD 628



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 98/448 (21%), Positives = 197/448 (43%), Gaps = 2/448 (0%)

Query: 45  LYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGG-H 103
           L S SK  DS   T     +  E   T   +   + +L  +GK ++A  +F  + +    
Sbjct: 114 LASISKQEDSSDATELLEFIAGELVLTDSELVYFVKALGRQGKWKKALEVFEWIRKHDCF 173

Query: 104 KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN-GMDPDSIFFNAVINAFSESGNMEEAM 162
           K   V   ++L+ L   ++  +   +   ++++     D   + ++I+  S +   +E +
Sbjct: 174 KLRGVATASILSVLGNHEQLPAALELFESLKQDESYSLDVYAYTSLISILSRARRFDEGI 233

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
             F  M+  G      TYN ++  YG  G   + ++ L    ++  + P+  TYN ++ A
Sbjct: 234 TLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITA 293

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
                +  EA  +  +M  +G  P+ VTYN +   Y + G   +A E++VEME  G+ PN
Sbjct: 294 CIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGKGGMHKEASELLVEMEAAGISPN 353

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   +I+ Y + G   EA    +++   G+ P+   +  LI  F      +   E   
Sbjct: 354 IVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRAERYEKALETFT 413

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M++    P+++TY+ +++ +     +D   ++F  M +    PD   ++ L K +    
Sbjct: 414 EMRKTNCTPNIVTYNILIDIYGRMEKLDDMMKVFKFMQEKNCTPDLVTWNSLLKSFGNCG 473

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
              +   +   M  +G+ P V  F  +I  +   G +D +++++  +   G+ P + TF 
Sbjct: 474 MLTEVSNVFREMKRAGYMPGVDTFNILIECYGRCGYVDYSVDIYKGLLRTGLQPTVPTFA 533

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVH 490
            LM   +   +  + E++ Q M   G+ 
Sbjct: 534 ALMASLAREGRWQQCEKVSQEMAEAGLQ 561



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/358 (20%), Positives = 148/358 (41%), Gaps = 46/358 (12%)

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTF-WKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           D + ++F   + A    G  ++A++ F W  K            +++   G   +   ++
Sbjct: 141 DSELVYF---VKALGRQGKWKKALEVFEWIRKHDCFKLRGVATASILSVLGNHEQLPAAL 197

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +L + + ++ +   ++  Y  L+      +   E   +   M   G + + VTYN +   
Sbjct: 198 ELFESLKQDESYSLDVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDL 257

Query: 258 YAQNGEA-DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
           Y + G++ D+ + +  EM+   + P+  T   +I+   +    +EALR  + MKE G  P
Sbjct: 258 YGKRGDSWDRIQSLFQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCP 317

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N V                                   TY+ +++ +   G   +  E+ 
Sbjct: 318 NRV-----------------------------------TYNALLDVYGKGGMHKEASELL 342

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M  AGI P+   Y+ L   Y R    ++A  L  +++  G  P+   + T+IS +   
Sbjct: 343 VEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSKGLCPDEFTYCTLISAFNRA 402

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
              ++A+E F +M +   +PN+ T+  L+  Y       R E++  +MK F    +K+
Sbjct: 403 ERYEKALETFTEMRKTNCTPNIVTYNILIDIYG------RMEKLDDMMKVFKFMQEKN 454



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 5/172 (2%)

Query: 352 DVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEP-EKAEEL 410
           DV  Y+++++  S A   D+   +F+ M + G + +A  Y+++   Y +  +  ++ + L
Sbjct: 212 DVYAYTSLISILSRARRFDEGITLFETMQREGQRGNAVTYNVMLDLYGKRGDSWDRIQSL 271

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
              M +    P+   + T+I+    +     A+ +F +M E G  PN  T+  L+  Y +
Sbjct: 272 FQEMKDLEISPDDYTYNTMITACIQNSHCQEALRLFQEMKEAGCCPNRVTYNALLDVYGK 331

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA----KRILSK 518
                 A E+L  M+A G+ P   T+  L  A    GL  EA    K +LSK
Sbjct: 332 GGMHKEASELLVEMEAAGISPNIVTYNELIAAYARAGLCDEAAALKKSLLSK 383


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 125/477 (26%), Positives = 210/477 (44%), Gaps = 36/477 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L + L+E G  + A   F  + +    P   +    L  L+     +        +   G
Sbjct: 68  LFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAG 127

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P    +N +I    + G+M  A   F +MK+ GLTP   TYNTLI GYG  G  +ESV
Sbjct: 128 IAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESV 187

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            L + M   G  +P++ TYN L+ ++C  K +  A+    +M    +KP+V++Y+T+  A
Sbjct: 188 CLFEEMKFMG-CEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDA 246

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIIS-------------------------- 291
             + G    A +  V+M   G+ PN  T   +I                           
Sbjct: 247 LCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLN 306

Query: 292 ---------GYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
                    G C+EG + EA    R M + GV PNL  +  LI G +++   D   E+  
Sbjct: 307 IVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFN 366

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M+E  + PD++ + TI+    +   +++CK I  +M ++GI  +   Y+ L   Y +  
Sbjct: 367 EMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAG 426

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
              +A  LL  M + G    VV F  +I G C  G +  AI  F +M +H + PN+  + 
Sbjct: 427 NRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYT 486

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
            L+ G  +      A+++   M+   + P K  +  + +     G  +EA  + +K+
Sbjct: 487 ALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKM 543



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/447 (24%), Positives = 204/447 (45%), Gaps = 5/447 (1%)

Query: 80  NSLIER----GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           N+LI+     G   E+  +F  +   G +P ++TY  L+ +    K          ++++
Sbjct: 171 NTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKD 230

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
             + P+ I ++ +I+A  + G M+ A+  F  M   GL P   TY++LI     AG   E
Sbjct: 231 KDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGE 290

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  L D M +E +V  N+ TY  L+   C E  + EA  +   M  +G+ P++  Y  + 
Sbjct: 291 AFMLADEMLQE-HVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALI 349

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + +    D+A E+  EM    ++P+    G I+ G C E K++E       MKE G+ 
Sbjct: 350 HGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIG 409

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
            N VI+  L+  + +  +R     +L  M++      V+T+  +++     G + +    
Sbjct: 410 ANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYY 469

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
           F  M    ++P+   Y+ L  G  +      A++L   M +    P+ + +T +I G   
Sbjct: 470 FGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLK 529

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G+   A+ + +KM E G+  +L  + +L+WG S+  Q  +A + L  M   G+ P ++ 
Sbjct: 530 HGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETL 589

Query: 496 FLLLAEARRATGLTKEAKRILSKIKNK 522
              L       G   EA  + +++  K
Sbjct: 590 CTRLLRKHYELGNIDEAIELQNELVEK 616



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 99/401 (24%), Positives = 197/401 (49%), Gaps = 9/401 (2%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S + L+++L + G  Q A   F ++   G  P+  TY++L+ A            +  
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLAD 296

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           ++ +  +D + + +  +++   E G M EA + F  M ++G+TP    Y  LI G+    
Sbjct: 297 EMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVR 356

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +++++L + M RE ++KP++  +  +V   C+E  + E   +M +M  SG+  + V Y
Sbjct: 357 SMDKAMELFNEM-REKDIKPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIY 415

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
            T+  AY + G   +A  ++ EM   G +    T   +I G CK G ++EA+ +   M +
Sbjct: 416 TTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPD 475

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
           + + PN+ ++  LI G  +        ++   M++  + PD I Y+ +++     G   +
Sbjct: 476 HDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQE 535

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              + + M + GI+ D +AY+ L  G  +  + ++A + L  MI  G  P+  + T ++ 
Sbjct: 536 ALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLR 595

Query: 432 GWCSDGSMDRAIEVFDKMCEHGV--------SPNLKTFETL 464
                G++D AIE+ +++ E G+         PN++T + L
Sbjct: 596 KHYELGNIDEAIELQNELVEKGLIHGNSNPAVPNIQTRDDL 636



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 146/332 (43%), Gaps = 16/332 (4%)

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEV 270
           P    ++ L         +  A     +M    + P   + N      ++ GE D + + 
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 271 IVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE 330
             +M   G+ P   T  I+I   CKEG +  A      MK+ G+ P++V +N LI G+ +
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 331 IMDRDGVDEVLALMKEFRV---NPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           I     +DE + L +E +     PDVITY+ ++N++     M +  E F +M    +KP+
Sbjct: 180 I---GLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPN 236

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
             +YS L     +E   + A +  + M   G  PN   ++++I   C  G++  A  + D
Sbjct: 237 VISYSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLAD 296

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           +M +  V  N+ T+ TL+ G  E      AEE+ + M   GV P    +         T 
Sbjct: 297 EMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELFRAMGKAGVTPNLQAY---------TA 347

Query: 508 LTKEAKRILSKIKNKERTNEMEAEEDIPVESL 539
           L     ++ S  K  E  NEM  E+DI  + L
Sbjct: 348 LIHGHIKVRSMDKAMELFNEMR-EKDIKPDIL 378



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/174 (25%), Positives = 83/174 (47%), Gaps = 1/174 (0%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   L++ L +RG  QEA   F  + +   +P++  YT L+  L           + 
Sbjct: 446 TVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLF 505

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++++  M PD I + A+I+   + GN +EA++   KM E G+      Y +L+ G    
Sbjct: 506 DEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQC 565

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
           G+ +++ K L  M  +G + P+      L+R      NI EA  + +++   G+
Sbjct: 566 GQVQQARKFLAEMIGKG-IIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGL 618


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 198/391 (50%), Gaps = 2/391 (0%)

Query: 81  SLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ-KRFNSIHSIMSQVEENGMD 139
           +L + G+ + A+ I  +++  G       + T++A L  + +R  S+ SI +++   GM 
Sbjct: 370 ALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMR 429

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P+     A +    + G  +EA+  ++K    GL    +T N LI G       +E+ K+
Sbjct: 430 PNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKV 489

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           +  M  +G ++ +  TYN+++R  C +  + EA  +   M   G KPD+ T+NT+  AY 
Sbjct: 490 IQTMLNKG-IELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYC 548

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
             G+ ++   ++ +M+  G+QP+  + G II G+CK   I++A  +   + + G+ PN+ 
Sbjct: 549 NLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVF 608

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           I+N LI G+    D  G  + +  MK   + P  +TY ++M     AG +++ K IF   
Sbjct: 609 IYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQA 668

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
            +  +      Y+I+ +GY +  +  +A      M   G  PN + +TT++  +   G+ 
Sbjct: 669 RENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNS 728

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           + A ++FD+M   GV P+  T+ TL+   SE
Sbjct: 729 EEASKLFDEMVGSGVIPDNITYGTLIARCSE 759



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 124/512 (24%), Positives = 219/512 (42%), Gaps = 71/512 (13%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV +   LM++L + G+ +EA  +   + +GG  PS+VT+  L+  L   +RF  +  ++
Sbjct: 255 TVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVL 314

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++E+ G+ P+ + +N +I      G+  +A+  F +M    + PT  TYN + K     
Sbjct: 315 QEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKE 374

Query: 191 GKPEESVKLLDLMSREG-----------------------------------NVKPNLRT 215
           G+ E + ++L+ M   G                                    ++PN   
Sbjct: 375 GEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPL 434

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
               +R  C      EA  +  K    G+  ++ T N +     +     +A +VI  M 
Sbjct: 435 MTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTML 494

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
           + G++ +  T  I+I G CK+ K++EA++    M   G  P+L  FN L+  +  +   +
Sbjct: 495 NKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKME 554

Query: 336 GVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
               +L  MK   + PD+++Y TI++    A  + K KE   ++   G+KP+   Y+ L 
Sbjct: 555 ETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALI 614

Query: 396 KGYVREQEPEKAEELLMTMIESGFHP---------------------------------- 421
            GY R  +   A + + TM  +G  P                                  
Sbjct: 615 GGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVD 674

Query: 422 -NVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
             V+ +T +I G+C  G M  A+  F++M   G+SPN  T+ TLM+ YS++     A ++
Sbjct: 675 LGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKL 734

Query: 481 LQIMKAFGVHPQKSTF-LLLAEARRATGLTKE 511
              M   GV P   T+  L+A       L K+
Sbjct: 735 FDEMVGSGVIPDNITYGTLIARCSEVNSLDKD 766



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 198/448 (44%), Gaps = 2/448 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S T ++ +L + GK      +   L   G +P++VTY  L+ AL    R      +  ++
Sbjct: 223 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 282

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           E+ GM P  + F  +IN  +      E      +M++ G++P    YN LI  +   G  
Sbjct: 283 EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 342

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
            ++++L D M  +  +KP   TYN++ +A C E  +  A  ++  M + GM      +NT
Sbjct: 343 SQALRLFDEMVLK-KMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNT 401

Query: 254 IATAYAQNGE-ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           +     Q     +    +  EM   G++PN       +   CK GK +EA+         
Sbjct: 402 VVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNK 461

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+  NL   N LI G  E        +V+  M    +  D ITY+ ++        M++ 
Sbjct: 462 GLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEA 521

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            ++  DM + G KPD   ++ L   Y    + E+   LL  M   G  P++V + TII G
Sbjct: 522 IKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDG 581

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C    + +A E   ++ + G+ PN+  +  L+ GY        A + ++ MK+ G+ P 
Sbjct: 582 HCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPT 641

Query: 493 KSTFLLLAEARRATGLTKEAKRILSKIK 520
             T+  L       GL +EAK I S+ +
Sbjct: 642 NVTYGSLMYWMCHAGLVEEAKTIFSQAR 669



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/358 (27%), Positives = 159/358 (44%), Gaps = 36/358 (10%)

Query: 75  MTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVE 134
           MT  M  L + GK QEA  I+   +  G   +L T   L+  L   K       ++  + 
Sbjct: 435 MTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTML 494

Query: 135 ENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE 194
             G++ DSI +N +I    +   MEEA+     M   G  P   T+NTL+  Y   GK E
Sbjct: 495 NKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKME 554

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           E+  LLD M  EG ++P++ +Y  ++   C  K+I +A   + ++   G+KP+V  YN +
Sbjct: 555 ETFHLLDQMKTEG-LQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNAL 613

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG--------------------------- 287
              Y +NG+   A + +  M+ NG+QP   T G                           
Sbjct: 614 IGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNV 673

Query: 288 --------IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
                   I+I GYCK GK+ EA+ +   M+  G+ PN + +  L+  + +  + +   +
Sbjct: 674 DLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASK 733

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKG 397
           +   M    V PD ITY T++   S    +DK      ++    +  D   Y+IL+ G
Sbjct: 734 LFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYNILSNG 791



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/442 (21%), Positives = 195/442 (44%), Gaps = 7/442 (1%)

Query: 85  RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN-GMDPDSI 143
           +G    A   F  L   G  PS+ T    L AL    + ++   +  ++ E+  +  +  
Sbjct: 163 QGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEY 222

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            + A+I A  ++G ++   +   ++  +GL PT  TYN L+     +G+ EE+ +L   M
Sbjct: 223 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 282

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
             +G + P++ T+ +L+      +   E   V+ +M   G+ P+ V YN +   + + G 
Sbjct: 283 E-QGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGH 341

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
             QA  +  EM    ++P   T  +I    CKEG+++ A R    M   G+  +  +FN 
Sbjct: 342 CSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNT 401

Query: 324 LIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMG 380
           ++   ++   R  ++ V+++  E     + P+    +  M      G   +   I+    
Sbjct: 402 VVAWLLQRTRR--LESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTL 459

Query: 381 KAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
             G+  +    + L  G    +  ++A +++ TM+  G   + + +  +I G C D  M+
Sbjct: 460 NKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKME 519

Query: 441 RAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLA 500
            AI++   M   G  P+L TF TL+  Y    +      +L  MK  G+ P   ++  + 
Sbjct: 520 EAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTII 579

Query: 501 EARRATGLTKEAKRILSKIKNK 522
           +        ++AK  L+++ ++
Sbjct: 580 DGHCKAKDIRKAKEYLTELMDR 601



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 178/400 (44%), Gaps = 11/400 (2%)

Query: 105 PSLVT-YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSES---GNMEE 160
           PSL+   T +  A  +  R   +H + +  E       +   + +I+ F  S   G++  
Sbjct: 109 PSLIADRTAIRTARRLLSRLLHVHPLRTAAEAVADAASTPSSDFLIHTFITSPAQGSLCR 168

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A D F  +   G  P+  T N  ++    AG+ + + ++ D M    NV  N  +Y  ++
Sbjct: 169 AADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMI 228

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
           +A C    +   + ++ ++  +G++P VVTYN +  A  ++G  ++A  +   ME  G+ 
Sbjct: 229 KALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMT 288

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           P+  T GI+I+G  +  +  E     + M++ GV PN VI+N LI        +    + 
Sbjct: 289 PSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCR---KGHCSQA 345

Query: 341 LALMKEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY-SILAK 396
           L L  E    ++ P  +TY+ I  A    G M++ + I +DM   G+      + +++A 
Sbjct: 346 LRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAW 405

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
              R +  E    +   M+  G  PN  + T  +   C  G    A+ ++ K    G+  
Sbjct: 406 LLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGV 465

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
           NL T   L+ G  E +    A +++Q M   G+     T+
Sbjct: 466 NLATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITY 505


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 194/406 (47%), Gaps = 2/406 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN- 136
           +M+     G+ + A+ + ++L   G  P++VTYT L+     + R      ++ +++EN 
Sbjct: 205 VMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENE 264

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            +  D + + A+IN + + G ME+A     +M ++G+      YNT+I GY   G+  E 
Sbjct: 265 KIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEV 324

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            KLL      G V  +  +YN LV  +C +  +T+A+     M  +G     +TYNT+  
Sbjct: 325 EKLLQANEYRG-VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLN 383

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            +   G  D A ++   M   GV PN  +C  ++ G+ K GK ++AL   +     G+  
Sbjct: 384 GFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLAR 443

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N+V  N +I G  +       +E+   MKE+    D +TY T+++ +   G + +  +I 
Sbjct: 444 NVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIR 503

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
            +M   G  P    ++    G    ++  K  ++ + M   G  PN V +  +I+GWC +
Sbjct: 504 IEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKE 563

Query: 437 GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
           G++  A  ++ +M E G+ PNL     L+  +    +   A  +LQ
Sbjct: 564 GNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQ 609



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 123/537 (22%), Positives = 224/537 (41%), Gaps = 95/537 (17%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   +RG+ ++A  + + +I+ G + ++  Y T++       R   +  ++   E  G
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++ D   +N +++ +   G M +A +T   M  +G T TT TYNTL+ G+   G  ++++
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395

Query: 198 KLLDLMSREGNV----------------------------------KPNLRTYNVLVRAW 223
           KL  LM + G V                                    N+ T N ++   
Sbjct: 396 KLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGL 455

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH------- 276
           C  + +TEA  + H+M       D +TY T+   Y + G+  +A ++ +EME+       
Sbjct: 456 CKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSV 515

Query: 277 ----------------------------NGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
                                        G+ PN  T G +I+G+CKEG + +A      
Sbjct: 516 EMFNSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFE 575

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDV--------------- 353
           M E G+ PNL I ++L+  F      D  + VL  + +  +  D                
Sbjct: 576 MVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIE 635

Query: 354 -----------ITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
                      I ++ ++      G +   + +F+D+   G  PD   YS L  G     
Sbjct: 636 SLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASG 695

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
             + A  L   M+ +   PN+V + ++I G C   ++ RA+ +F+K+   G+SPN  T+ 
Sbjct: 696 SIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYN 755

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           TL+ G+ +      A ++ Q M   G+ P   T+ +L       G  +EA ++L ++
Sbjct: 756 TLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQM 812



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/430 (24%), Positives = 203/430 (47%), Gaps = 6/430 (1%)

Query: 70  RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSI 129
           RT+RS  +L+N L++ G    A A+F  +   G  P   T   +  A     R       
Sbjct: 127 RTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADF 186

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           + ++EE G+D + + ++AV++ +   G  E A      ++  GL+P   TY  L+KGY  
Sbjct: 187 LKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCK 246

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
            G+ EE+ K++  +     +  +   Y  L+  +C    + +A  V  +M  +G++ ++ 
Sbjct: 247 EGRMEEAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMF 306

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
            YNT+   Y + G   + E+++   E+ GV  +  +   ++ GYC++G + +A      M
Sbjct: 307 VYNTMINGYCKLGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMM 366

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA---LMKEFRVNPDVITYSTIMNAWSTA 366
              G     + +N L+ GF     R  +D+ L    LM +  V P+ I+ ST+++ +  A
Sbjct: 367 VRNGFTGTTLTYNTLLNGFCS---RGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKA 423

Query: 367 GFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIF 426
           G  ++   ++ +    G+  +    + +  G  + +   +AEEL   M E     + + +
Sbjct: 424 GKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTY 483

Query: 427 TTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKA 486
            T+I G+C  G + RA ++  +M   G  P+++ F + + G   A+Q  +  +I   M A
Sbjct: 484 RTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRVEMSA 543

Query: 487 FGVHPQKSTF 496
            G+ P   T+
Sbjct: 544 KGLSPNTVTY 553



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 210/454 (46%), Gaps = 39/454 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S + L++   + GK ++A  ++   +  G   ++VT  T++  L   +R      +  ++
Sbjct: 412 SCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRM 471

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
           +E     DS+ +  +I+ + + G++  A     +M+  G  P+   +N+ I G  IA   
Sbjct: 472 KEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIA--- 528

Query: 194 EESVKLLDL---MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           ++S K+ D+   MS +G + PN  TY  L+  WC E N+ +A  +  +M   G+KP++  
Sbjct: 529 KQSGKVNDIRVEMSAKG-LSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFI 587

Query: 251 YNTIATAYAQNGEADQAEEV-------------------------IVEMEHNGVQPNGRT 285
            + + + + + G+ D+A  V                         I+E    G   + + 
Sbjct: 588 CSVLVSCFYREGKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKI 647

Query: 286 C-GIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
              I+I G CK G++ +A      +K  G  P+   ++ LI G         +D    L 
Sbjct: 648 MWNIVILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHG---CSASGSIDLAFGLR 704

Query: 345 KEF---RVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
            E    R+ P+++TY++++     +  + +   +F+ +   GI P+A  Y+ L  G+ ++
Sbjct: 705 DEMLSARLTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKD 764

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
               +A +L   MI+ G  P V  +T +I G C+ G M+ AI++ D+M E+ V PN  T+
Sbjct: 765 GNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITY 824

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            TL+ GY+         ++   M   G+ P   T
Sbjct: 825 WTLIQGYARCGNMKAITKLYNEMHICGLLPANWT 858



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 196/424 (46%), Gaps = 2/424 (0%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           S   L+ +  + G+ ++A  +F+ + + G + +L +   LL  L       +  ++  Q+
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 134 EENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKP 193
              G  PD      +  A+   G +  A D   +M+E GL      Y+ ++ GY   G+ 
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYN 252
           E + KLL  +  +G + PN+ TY +LV+ +C E  + EA  V+ ++  +  +  D V Y 
Sbjct: 216 EVARKLLHSLQVKG-LSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYG 274

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
            +   Y Q G  + A  V  EM   GVQ N      +I+GYCK G++ E  +  +  +  
Sbjct: 275 ALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYR 334

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           GV+ +   +N L+ G+          E   +M         +TY+T++N + + G +D  
Sbjct: 335 GVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDA 394

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
            +++  M K G+ P+  + S L  G+ +  + E+A  L    +  G   NVV   T+I+G
Sbjct: 395 LKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVING 454

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQ 492
            C +  M  A E+F +M E     +  T+ TL+ GY +     RA +I   M+  G  P 
Sbjct: 455 LCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPS 514

Query: 493 KSTF 496
              F
Sbjct: 515 VEMF 518



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 186/378 (49%), Gaps = 4/378 (1%)

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++N   ++G++  A+  F +M+ +G  P   T   + K Y   G+   +   L  M  
Sbjct: 133 NRLLNQLVQAGDIGTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEE 192

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G +  NL  Y+ ++  +C       A  ++H +   G+ P+VVTY  +   Y + G  +
Sbjct: 193 MG-LDVNLVAYHAVMDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRME 251

Query: 266 QAEEVIVEMEHN-GVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
           +AE+V+ E++ N  +  +    G +I+GYC+ G++++A R    M + GV  N+ ++N +
Sbjct: 252 EAEKVVKEIKENEKIVIDEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTM 311

Query: 325 IKGFVEIMDRDGVDEVLALMKEFR-VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           I G+ + + R G  E L    E+R VN D  +Y+T+++ +   GFM K  E  D M + G
Sbjct: 312 INGYCK-LGRMGEVEKLLQANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNG 370

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI 443
                  Y+ L  G+      + A +L   M++ G  PN +  +T++ G+   G  ++A+
Sbjct: 371 FTGTTLTYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQAL 430

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
            ++ +    G++ N+ T  T++ G  + R+   AEE+   MK +       T+  L +  
Sbjct: 431 NLWKETLARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGY 490

Query: 504 RATGLTKEAKRILSKIKN 521
              G    A +I  +++N
Sbjct: 491 CKLGDLGRATQIRIEMEN 508



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 145/302 (48%), Gaps = 1/302 (0%)

Query: 215 TYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM 274
           ++++L+RA  +   + +A  V  +M  +G +  + + N +     Q G+   A  V  +M
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
              G  P+  T  I+   YC++G++  A  F + M+E G+  NLV ++ ++ G+  I   
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 335 DGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK-AGIKPDAHAYSI 393
           +   ++L  ++   ++P+V+TY+ ++  +   G M++ +++  ++ +   I  D  AY  
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275

Query: 394 LAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHG 453
           L  GY +    E A  +   MI++G   N+ ++ T+I+G+C  G M    ++       G
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335

Query: 454 VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           V+ +  ++ TL+ GY       +A E   +M   G      T+  L     + G   +A 
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395

Query: 514 RI 515
           ++
Sbjct: 396 KL 397



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/329 (21%), Positives = 147/329 (44%), Gaps = 33/329 (10%)

Query: 102 GHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA 161
           G  P+ VTY  L+A    +   +    +  ++ E G+ P+    + +++ F   G ++EA
Sbjct: 545 GLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEA 604

Query: 162 MDTFWKMKESGLTPTTST--------------------------YNTLIKGYGIAGKPEE 195
                K+ ++ +    S                           +N +I G    G+  +
Sbjct: 605 NLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVAD 664

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  L + +  +G +  N  TY+ L+       +I  A+ +  +M ++ + P++VTYN++ 
Sbjct: 665 ARNLFEDLKVKGFIPDNF-TYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLI 723

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
               ++    +A  +  +++  G+ PN  T   +I G+CK+G   EA +  + M + G+ 
Sbjct: 724 YGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQ 783

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P +  + +LI G       +   ++L  M E  V+P+ ITY T++  ++  G M    ++
Sbjct: 784 PTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKL 843

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEP 404
           +++M   G+ P          G+V++ EP
Sbjct: 844 YNEMHICGLLPANWT------GHVKQAEP 866



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/170 (24%), Positives = 80/170 (47%)

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           ++  ++ A + AG +     +FD+MGKAG +    + + L    V+  +   A  +   M
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
             +G  P+      +   +C DG +  A +   +M E G+  NL  +  +M GY    Q 
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
             A ++L  ++  G+ P   T+ LL +     G  +EA++++ +IK  E+
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEK 265



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/169 (29%), Positives = 69/169 (40%), Gaps = 39/169 (23%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           + +   L+  L +      A ++FN L   G  P+ +TY TL                  
Sbjct: 716 IVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTL------------------ 757

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
                            I+   + GN  EA     KM + G+ PT  TY  LI G    G
Sbjct: 758 -----------------IDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIHGLCTQG 800

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC---NEKNITEAWNVMH 237
             EE++KLLD M  E NV PN  TY  L++ +    N K IT+ +N MH
Sbjct: 801 YMEEAIKLLDQMI-ENNVDPNFITYWTLIQGYARCGNMKAITKLYNEMH 848


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/380 (28%), Positives = 181/380 (47%), Gaps = 17/380 (4%)

Query: 122 RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
           +F+    I+  +   G  PD+  ++ VI    E+  +E+A   F +MK  G+ P   TY 
Sbjct: 435 KFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYT 494

Query: 182 TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
            LI  +   G  E++    D M   G   P++ TY  L+ A+   K + +A ++ H+M  
Sbjct: 495 ILIDSFCKVGLIEQARSWFDEMESVG-CSPSVVTYTALLHAYLKTKQVPQASDIFHRMVD 553

Query: 242 SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM---------------EH-NGVQPNGRT 285
           +G  P+ +TY+ +     + GE+ +A EV  +M               EH + + PN  T
Sbjct: 554 AGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVT 613

Query: 286 CGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMK 345
            G +I G CK  K+ +A      M   G  PN +I++ LI GF ++   D   EV   M 
Sbjct: 614 YGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMS 673

Query: 346 EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPE 405
           +    P V TY+++++A      +D   ++   M ++   P+   Y+ +  G  R  E +
Sbjct: 674 KCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQ 733

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           KA +LL  M + G +PNVV +T++I G    G +D ++++F +M   G +PN  T+  L+
Sbjct: 734 KALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLI 793

Query: 466 WGYSEARQPWRAEEILQIMK 485
                A     A  +L  MK
Sbjct: 794 NHCCAAGLLDEAHSLLSEMK 813



 Score =  158 bits (400), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 211/470 (44%), Gaps = 25/470 (5%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T++++ L+E     EA +  + +      P++VTY TLLA    +K+      I+S +  
Sbjct: 278 TQMISGLMEASLFDEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMN 337

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G +P+   FN++++++  + +   A     +M   G  P    YN  I G   +G+   
Sbjct: 338 EGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFI-GSICSGEELP 396

Query: 196 SVKLLDL-------MSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
           S  LL L       M     V   + T N   R  C      +A+ ++  M   G  PD 
Sbjct: 397 SPDLLALAEKVYEEMLASSCVLNKVNTAN-FARCLCGMGKFDKAFQIIKLMMRKGFVPDT 455

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
            TY+ + T   +  + ++A  +  EM+  GV P+  T  I+I  +CK G I++A  +   
Sbjct: 456 STYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDE 515

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M+  G  P++V +  L+  +++        ++   M +    P+ ITYS +++    AG 
Sbjct: 516 MESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGE 575

Query: 369 MDKCKEIF-------DDMGKA---------GIKPDAHAYSILAKGYVREQEPEKAEELLM 412
             K  E++       D++G            I P+   Y  L  G  +  +   A+ELL 
Sbjct: 576 SQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLD 635

Query: 413 TMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEAR 472
            M  +G  PN +I+  +I G+C  G +D A EVF +M + G  P + T+ +L+    + R
Sbjct: 636 VMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDR 695

Query: 473 QPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           +   A ++L  M      P   T+  + +     G  ++A ++LS ++ +
Sbjct: 696 RLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKR 745



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 110/448 (24%), Positives = 198/448 (44%), Gaps = 53/448 (11%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++S  + G  ++A++ F+ +   G  PS+VTYT LL A    K+      I  
Sbjct: 490 VYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFH 549

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM----------------KESGLTP 175
           ++ + G  P++I ++A+++   ++G  ++A + + KM                    + P
Sbjct: 550 RMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAP 609

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
              TY  LI G   A K  ++ +LLD+MS  G  +PN   Y+ L+  +C    +  A  V
Sbjct: 610 NVVTYGALIDGLCKAHKVVDAQELLDVMSSNG-CEPNHIIYDALIDGFCKVGKLDNAQEV 668

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
             +M+  G  P V TY ++  A  ++   D A +V+ +M  +   PN  T   +I G C+
Sbjct: 669 FFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCR 728

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
            G+ ++AL+    M++ G +PN+V +  LI G  +    D   ++   M      P+ +T
Sbjct: 729 IGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVT 788

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDMGKA--------------------------------- 382
           Y  ++N    AG +D+   +  +M +                                  
Sbjct: 789 YRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESH 848

Query: 383 GIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV---IFTTIISGWCSDGSM 439
           G+   A  Y +L   + +    EKA EL   M+E     N+     +T++I   C    +
Sbjct: 849 GMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQL 908

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWG 467
           ++A E++ ++   GV P L  F  L+ G
Sbjct: 909 EKAFELYSEITRKGVVPELSAFICLIKG 936



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 109/503 (21%), Positives = 210/503 (41%), Gaps = 59/503 (11%)

Query: 75  MTKLMNSLIER----GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT----------IQ 120
           + +L+N ++ +    G   +A      L + G++PS  TY  L+  L           +Q
Sbjct: 171 LGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQ 230

Query: 121 KRFNSI----------------------HSIMSQVEENGMDPDSIFFNAVINAFSESGNM 158
           K  + +                         +  +E      D++    +I+   E+   
Sbjct: 231 KEMSELGFCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLF 290

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
           +EA+    +M+ +   P   TY TL+ G+    +     +++ +M  EG   PN   +N 
Sbjct: 291 DEAISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEG-CNPNPSLFNS 349

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ------AEEVIV 272
           LV ++CN ++   A+ ++++MA  G  P  V YN    +     E         AE+V  
Sbjct: 350 LVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYE 409

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           EM  +    N           C  GK  +A +  + M   G  P+   ++ +I    E M
Sbjct: 410 EMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAM 469

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
             +    +   MK   V PDV TY+ +++++   G +++ +  FD+M   G  P    Y+
Sbjct: 470 KVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYT 529

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMC-- 450
            L   Y++ ++  +A ++   M+++G  PN + ++ ++ G C  G   +A EV+ KM   
Sbjct: 530 ALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGT 589

Query: 451 ------------EH--GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
                       EH   ++PN+ T+  L+ G  +A +   A+E+L +M + G  P    +
Sbjct: 590 SDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIY 649

Query: 497 LLLAEARRATGLTKEAKRILSKI 519
             L +     G    A+ +  ++
Sbjct: 650 DALIDGFCKVGKLDNAQEVFFRM 672



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 176/405 (43%), Gaps = 17/405 (4%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPD 141
           L   GK  +A  I   ++  G  P   TY+ ++  L    +      +  +++  G+ PD
Sbjct: 430 LCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPD 489

Query: 142 SIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD 201
              +  +I++F + G +E+A   F +M+  G +P+  TY  L+  Y    +  ++  +  
Sbjct: 490 VYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLKTKQVPQASDIFH 549

Query: 202 LMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG----------------MK 245
            M   G   PN  TY+ LV   C      +A  V  KM  +                 + 
Sbjct: 550 RMVDAG-CAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIA 608

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           P+VVTY  +     +  +   A+E++  M  NG +PN      +I G+CK GK+  A   
Sbjct: 609 PNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEV 668

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              M + G  P +  +  LI    +    D   +VL+ M E    P+V+TY+ +++    
Sbjct: 669 FFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCR 728

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G   K  ++   M K G  P+   Y+ L  G  +  + + + +L   MI  G  PN V 
Sbjct: 729 IGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVT 788

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           +  +I+  C+ G +D A  +  +M +      ++ + +++ G+S+
Sbjct: 789 YRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSK 833



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/402 (23%), Positives = 185/402 (46%), Gaps = 24/402 (5%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLI------------EGGH----KPSLVTYTTLLAAL 117
           + + L++ L + G+ Q+A  ++  +I            EG H     P++VTY  L+  L
Sbjct: 562 TYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGL 621

Query: 118 TIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT 177
               +      ++  +  NG +P+ I ++A+I+ F + G ++ A + F++M + G  PT 
Sbjct: 622 CKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTV 681

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
            TY +LI       + + ++K+L  M  E +  PN+ TY  ++   C      +A  ++ 
Sbjct: 682 HTYTSLIDAMFKDRRLDLAIKVLSQM-LESSCTPNVVTYTAMIDGLCRIGECQKALKLLS 740

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
            M   G  P+VVTY ++     ++G+ D + ++  +M   G  PN  T  ++I+  C  G
Sbjct: 741 MMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAG 800

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVE-IMDRDGVDEVLALMKEFRVNPDVITY 356
            + EA      MK+      +  +  +++GF +  +   G+ E L       + P    Y
Sbjct: 801 LLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAP---VY 857

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA---YSILAKGYVREQEPEKAEELLMT 413
             +++++S AG ++K  E+  +M +     +  +   Y+ L +      + EKA EL   
Sbjct: 858 GLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSE 917

Query: 414 MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
           +   G  P +  F  +I G       + A+++   MC+ GV+
Sbjct: 918 ITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGVN 959



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 112/487 (22%), Positives = 185/487 (37%), Gaps = 67/487 (13%)

Query: 82  LIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLA---ALTIQKRFNSIHSIMSQVEENGM 138
           L+E  +PQ    + +        P+ V +   L    A+ I K   +  S      E  +
Sbjct: 36  LLEAPEPQRGPRLSSKDFAFLQVPTPVLHAAALPPPEAVLISKAIRAYASDFDGKAERFL 95

Query: 139 DPDSIFFN-AVINAFSESGNMEEAMDTF--WKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
                F N AV+ A   S    E    F  W  ++ G + T + YN L +      +   
Sbjct: 96  RRHRDFLNDAVVVAVLRSVRTPELCVRFFLWAERQVGYSHTGACYNALAEVLHFDDRART 155

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + +LL  +  E + +   R  NV+VR  C      +A   + ++   G +P   TYN + 
Sbjct: 156 TERLLREIG-EDDREVLGRLLNVIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALV 214

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
              A  G+ D    V  EM   G   +  T G      CKEG+  +AL     ++     
Sbjct: 215 QVLATAGQMDMGFRVQKEMSELGFCTDKFTVGCFAQALCKEGRWSDALVM---IEREDFK 271

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDK- 371
            + V+   +I G   +M+    DE ++ +   R N   P+V+TY T++     AGF+ K 
Sbjct: 272 LDTVLCTQMISG---LMEASLFDEAISFLHRMRCNSCIPNVVTYRTLL-----AGFLKKK 323

Query: 372 ----CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
               CK I   M   G  P+   ++ L   Y   ++   A +LL  M   G  P  V++ 
Sbjct: 324 QLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNARDYPYAYKLLNRMAGCGCPPGYVVYN 383

Query: 428 TIISGWCSD-----------------------------------------GSMDRAIEVF 446
             I   CS                                          G  D+A ++ 
Sbjct: 384 IFIGSICSGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQII 443

Query: 447 DKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRAT 506
             M   G  P+  T+  ++    EA +  +A  + Q MK+ GV P   T+ +L ++    
Sbjct: 444 KLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKV 503

Query: 507 GLTKEAK 513
           GL ++A+
Sbjct: 504 GLIEQAR 510



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 122/264 (46%), Gaps = 6/264 (2%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           TV + T L++++ +  +   A  + + ++E    P++VTYT ++  L           ++
Sbjct: 680 TVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLL 739

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S +E+ G +P+ + + ++I+   +SG ++ ++  F +M   G  P   TY  LI     A
Sbjct: 740 SMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAA 799

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +E+  LL  M ++      ++ Y  +V+ +   K    +  ++ ++ + GM      
Sbjct: 800 GLLDEAHSLLSEM-KQTYWPKYVQGYCSVVQGF--SKKFIASLGLLEELESHGMVSIAPV 856

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPN---GRTCGIIISGYCKEGKIKEALRFAR 307
           Y  +  ++++ G  ++A E+  EM       N     T   +I   C   ++++A     
Sbjct: 857 YGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYS 916

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEI 331
            +   GV P L  F  LIKG +++
Sbjct: 917 EITRKGVVPELSAFICLIKGLIKV 940


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 207/465 (44%), Gaps = 48/465 (10%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R  T L+N L + G+   A  + +   E    P +V +T ++  L  +KR +   S++ +
Sbjct: 10  RVCTALLNGLCKTGQLDRAMLLLD---EMPCSPDMVAFTVVINGLCREKRLDEAFSVLER 66

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
               G +PD + +N  I+   ++  +++A     KM E    PTT TY  L+ G   AG+
Sbjct: 67  AVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGR 126

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            +E++ +L+ M  +GN  P L+TY V++        + EA  +   M  +G +PD   Y 
Sbjct: 127 LDEAMAILEQMVEKGN-SPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYT 185

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNG----VQPNGRTCGIII------------------ 290
            + +  A+ G+ D+A   + +M  NG    V+P+     ++I                  
Sbjct: 186 ALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDE 245

Query: 291 ----------------SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDR 334
                           +  CK  + +EA+ F + M E    P L  +  L+ GF+++   
Sbjct: 246 LDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKL--- 302

Query: 335 DGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAY 391
             +DE L  +KE       PD +TY++I++     G +++  E F +M   G +PDA  Y
Sbjct: 303 GRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTY 362

Query: 392 SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCE 451
           + L  G+++ +   KA  +   M++SG   + V +  I+ G C  G +  A   F  M E
Sbjct: 363 AALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEE 422

Query: 452 HGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            G    + T+  LM G+        A E+ + M   G  P   ++
Sbjct: 423 RGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSY 467



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 129/500 (25%), Positives = 218/500 (43%), Gaps = 43/500 (8%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M+++ C  T  + T L++ L++ G+  EA AI   ++E G+ P+L TYT ++  L+   R
Sbjct: 102 MDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGR 161

Query: 123 FNSIHSI-----------------------------------MSQVEEN----GMDPDSI 143
                 I                                   ++Q+ EN    G++PD +
Sbjct: 162 VEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVV 221

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
             N VI     SGN+E+A+  F ++ +S L  T  T+N L+     A + EE++  +  M
Sbjct: 222 IHNLVIRQLCASGNLEDALAYFDELDDS-LDLTHFTFNPLVAALCKAERTEEAIAFVKKM 280

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
           S E    P L TY  LV  +     + EA   + +    G  PD VTY +I     + G 
Sbjct: 281 S-ERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGR 339

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            ++  E   EM + G +P+  T   +I G+ K   I +A R  R M + G   + V +N+
Sbjct: 340 VEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNI 399

Query: 324 LIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAG 383
           ++ G  +             M+E      V+TYS +M+ + + G +    E+F  M   G
Sbjct: 400 ILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRG 459

Query: 384 IKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD-GSMDRA 442
            +P+  +Y+I+ +G  R  +  KA      +++    P+V  F + + G C    ++   
Sbjct: 460 CEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDG 519

Query: 443 IEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
           +E+F+ M   G SPNL ++  LM G   A       EI   M + GV P    F  L   
Sbjct: 520 VELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRW 579

Query: 503 RRATGLTKEAKRILSKIKNK 522
               G   EA  +  +++ +
Sbjct: 580 LCIAGRVDEALEVFRELERR 599



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 125/498 (25%), Positives = 211/498 (42%), Gaps = 80/498 (16%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+++ T +++ L + G+ +EA+ IF +++  G +P    YT L++ L    + +     +
Sbjct: 145 TLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYL 204

Query: 131 SQVEENG----MDPDSIFFNAVINAFSESGNM---------------------------- 158
           +Q+ ENG    ++PD +  N VI     SGN+                            
Sbjct: 205 NQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFDELDDSLDLTHFTFNPLVAAL 264

Query: 159 ------EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV--------------- 197
                 EEA+    KM E    PT  TY +L+ G+   G+ +E++               
Sbjct: 265 CKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDA 324

Query: 198 ----KLLDLMSREGNVK---------------PNLRTYNVLVRAWCNEKNITEAWNVMHK 238
                ++D + + G V+               P+  TY  L+  +   K I +A  V  +
Sbjct: 325 VTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQ 384

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  SG     VTYN I     + G   +A    + ME  G      T   ++ G+C EG 
Sbjct: 385 MLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGN 444

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           +  A+   R M + G  PNLV +N++I+G                + + R+ PDV T+++
Sbjct: 445 VSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNS 504

Query: 359 IMNAWS----TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
            ++       T G      E+F+ M   G  P+ H+YSIL  G  R    E   E+   M
Sbjct: 505 FLHGLCQRLDTVG---DGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEM 561

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           +  G  P+VV+F T+I   C  G +D A+EVF ++ E   +P+  ++ +L+   S   + 
Sbjct: 562 VSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL-ERRSAPDAWSYWSLLDALSRCERM 620

Query: 475 WRAEEILQIMKAFGVHPQ 492
             A  +   MK  G  P+
Sbjct: 621 EEARLLSFHMKLQGCAPR 638



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/413 (22%), Positives = 174/413 (42%), Gaps = 48/413 (11%)

Query: 141 DSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL 200
           D+    A++N   ++G ++ AM     + E   +P    +  +I G     + +E+  +L
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAM---LLLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVL 64

Query: 201 DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQ 260
           +   R G  +P+  TYNV +   C  + + +A+ ++ KM      P  VTY  +     +
Sbjct: 65  ERAVRAG-CEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLK 123

Query: 261 NGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVI 320
            G  D+A  ++ +M   G  P  +T  ++I G  K G+++EA R    M   G  P+  +
Sbjct: 124 AGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFV 183

Query: 321 FNLLIKGFVEIMDRDGVDEVLALMKEFR-------VNPDVITYSTIMNAWSTAGFMDKCK 373
           +  LI G  +I     +DE L  + +         V PDV+ ++ ++     +G ++   
Sbjct: 184 YTALISGLAKI---GKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDAL 240

Query: 374 EIFDDMGK--------------------------AGIK--------PDAHAYSILAKGYV 399
             FD++                            A +K        P    Y+ L  G++
Sbjct: 241 AYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFL 300

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +    ++A   L   +E GF P+ V +T+II G C  G ++   E F +M   G  P+  
Sbjct: 301 KLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAV 360

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEA 512
           T+  L+ G+ +A+   +A  + + M   G      T+ ++ +     G   EA
Sbjct: 361 TYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEA 413



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 85/183 (46%)

Query: 337 VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
           +D  + L+ E   +PD++ ++ ++N       +D+   + +   +AG +PD   Y++   
Sbjct: 25  LDRAMLLLDEMPCSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFID 84

Query: 397 GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
           G  + +  + A +LL  M E    P  V +T ++ G    G +D A+ + ++M E G SP
Sbjct: 85  GLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAILEQMVEKGNSP 144

Query: 457 NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRIL 516
            LKT+  ++ G S+A +   A  I   M   G  P    +  L       G   EA   L
Sbjct: 145 TLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALISGLAKIGKLDEALVYL 204

Query: 517 SKI 519
           +++
Sbjct: 205 NQM 207


>gi|222636666|gb|EEE66798.1| hypothetical protein OsJ_23544 [Oryza sativa Japonica Group]
          Length = 665

 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 226/456 (49%), Gaps = 27/456 (5%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  +   ++N+    G  ++A  +   + E G  P LVT+  +L+AL    +++   S  
Sbjct: 80  TRTTYNNVINACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYF 139

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKE--SGLTPTTSTYNTLIKGYG 188
             ++   +  D+   N +I+   + G   EA++ F  M+E  +   P   TY +++  Y 
Sbjct: 140 EIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYC 199

Query: 189 IAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDV 248
           I G+ E    + DLM  EG VKPN+  YN L+ A+ +     EA  + + +  +G++PD+
Sbjct: 200 IYGQVENCKAIFDLMVAEG-VKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDI 258

Query: 249 VTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           V+Y ++  AY ++ + ++A EV  +M+ N  +PN  +   +I  Y   G +KEA+     
Sbjct: 259 VSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHE 318

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M++ G+ P++V  + L+           ++ +L   +   ++ + + Y++ + ++ + G 
Sbjct: 319 MEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGD 378

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGY-----------------------VREQEPE 405
            +K  E++  M ++ +KPDA  Y+IL  G                         +E +  
Sbjct: 379 YEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLS 438

Query: 406 KAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLM 465
           +AE    +M +SG  P+V+ +TT+I  + + G   RA ++F +M  +G+ P+     +LM
Sbjct: 439 EAESTFSSMKKSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLM 498

Query: 466 WGYSEARQPWRAEEILQIMKAFGVH-PQKSTFLLLA 500
             +++  +P R  ++++ MK   +   QKS F ++A
Sbjct: 499 EAFNKGGEPERVLQLMEFMKKKSIPLNQKSYFEIIA 534



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 120/464 (25%), Positives = 218/464 (46%), Gaps = 56/464 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T +M+S    G+ +  +AIF+ ++  G KP++V Y +LL A   +       +I +
Sbjct: 188 VVTYTSIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFN 247

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +++NG+ PD + + +++NA+  S   E+A + F KMK++   P   +YN LI  YG AG
Sbjct: 248 LIKKNGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAG 307

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
             +E+V LL  M ++G ++P++ + + L+ A    + IT    ++    + G+  + V Y
Sbjct: 308 MLKEAVGLLHEMEKDG-IQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAY 366

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N+   +Y   G+ ++A E+   M  + V+P+  T  I+ISG  K GK  E+LRF   M +
Sbjct: 367 NSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVD 426

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDG----VDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
             V                   ++G     +   + MK+    PDV+TY+T++ A++  G
Sbjct: 427 SKVSST----------------KEGKLSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAGG 470

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPN----- 422
              +  ++F +M   GI PDA   S L + + +  EPE+  +L+  M +     N     
Sbjct: 471 GWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPERVLQLMEFMKKKSIPLNQKSYF 530

Query: 423 -VVIFTTIISGW----------------CSDGSMDRAI-------------EVFDKMCEH 452
            ++   T+I  W                 S G+++  +             ++F KM   
Sbjct: 531 EIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVLNFLGKCGKTENMMKLFYKMVTS 590

Query: 453 GVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
             +  L T+  ++       +  +  E+LQ M+  GVHP    F
Sbjct: 591 CSTVGLSTYAVVLRNLLVVGKWRKYIEVLQWMEDSGVHPTLYMF 634



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/448 (24%), Positives = 201/448 (44%), Gaps = 26/448 (5%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A+ +F  + E   KP    Y +L+ A +   ++    +IM  +    + P    +N VI
Sbjct: 29  QARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDMLRAAIPPTRTTYNNVI 88

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNV 209
           NA   +GN ++A++   KM E+G+ P   T+N ++       +  +++   ++M +  NV
Sbjct: 89  NACGAAGNWKKALELCKKMTENGVGPDLVTHNIVLSALKNGAQYSKAISYFEIM-KGANV 147

Query: 210 KPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK--PDVVTYNTIATAYAQNGEADQA 267
             +  T N+++          EA  + + M     K  PDVVTY +I  +Y   G+ +  
Sbjct: 148 TSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYTSIMHSYCIYGQVENC 207

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
           + +   M   GV+PN      ++  Y   G  +EAL     +K+ G+ P++V +  L+  
Sbjct: 208 KAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREALAIFNLIKKNGLRPDIVSYTSLLNA 267

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
           +      +   EV   MK+    P+ ++Y+ +++A+ +AG + +   +  +M K GI+PD
Sbjct: 268 YGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPD 327

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
             + S L     R ++  + E +L      G   N V + + I  + S G  ++A+E++ 
Sbjct: 328 VVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYT 387

Query: 448 KMCEHGVSPNLKTFETLMWG------YSEARQPW-----------------RAEEILQIM 484
            M E  V P+  T+  L+ G      Y+E+ + +                  AE     M
Sbjct: 388 SMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSSTKEGKLSEAESTFSSM 447

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEA 512
           K  G  P   T+  L +A  A G  K A
Sbjct: 448 KKSGCFPDVLTYTTLIQAYNAGGGWKRA 475



 Score =  139 bits (351), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/462 (21%), Positives = 209/462 (45%), Gaps = 9/462 (1%)

Query: 110 YTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMK 169
           Y  ++       + +    +  +++E    PD+  +N++I+A S +G    A++    M 
Sbjct: 14  YGMMIRLYARHNQVDQARGLFFEMQEWRCKPDADIYNSLIHAHSRAGQWRWAINIMEDML 73

Query: 170 ESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNI 229
            + + PT +TYN +I   G AG  +++++L   M+  G V P+L T+N+++ A  N    
Sbjct: 74  RAAIPPTRTTYNNVINACGAAGNWKKALELCKKMTENG-VGPDLVTHNIVLSALKNGAQY 132

Query: 230 TEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ--PNGRTCG 287
           ++A +    M  + +  D  T N I     + G+  +A E+   M     +  P+  T  
Sbjct: 133 SKAISYFEIMKGANVTSDTFTLNIIIHCLVKIGQCGEAIELFNSMRERRTKCPPDVVTYT 192

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEI-MDRDGVDEVLALMKE 346
            I+  YC  G+++        M   GV PN+V +N L+  +    M R+ +  +  L+K+
Sbjct: 193 SIMHSYCIYGQVENCKAIFDLMVAEGVKPNIVAYNSLLGAYASRGMHREAL-AIFNLIKK 251

Query: 347 FRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEK 406
             + PD+++Y++++NA+  +   +K +E+F+ M K   KP+  +Y+ L   Y      ++
Sbjct: 252 NGLRPDIVSYTSLLNAYGRSAQPEKAREVFNKMKKNSCKPNKVSYNALIDAYGSAGMLKE 311

Query: 407 AEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMW 466
           A  LL  M + G  P+VV  +T+++       + R   + +     G+  N   + + + 
Sbjct: 312 AVGLLHEMEKDGIQPDVVSISTLLAACGRCRQITRIETILEAARSRGIDLNTVAYNSGIK 371

Query: 467 GYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTN 526
            Y       +A E+   M+   V P   T+ +L       G   E+ R    + + + ++
Sbjct: 372 SYLSFGDYEKALELYTSMRESNVKPDAVTYNILISGSSKLGKYTESLRFFEDMVDSKVSS 431

Query: 527 EMEAEEDIPVESLERLYHKEATTASYPNLLQIPNVVSSDQKG 568
             E +    +   E  +     +  +P++L    ++ +   G
Sbjct: 432 TKEGK----LSEAESTFSSMKKSGCFPDVLTYTTLIQAYNAG 469



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 181/389 (46%), Gaps = 18/389 (4%)

Query: 64  MNKESCRTVR-SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K SC+  + S   L+++    G  +EA  + + + + G +P +V+ +TLLAA    ++
Sbjct: 284 MKKNSCKPNKVSYNALIDAYGSAGMLKEAVGLLHEMEKDGIQPDVVSISTLLAACGRCRQ 343

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
              I +I+      G+D +++ +N+ I ++   G+ E+A++ +  M+ES + P   TYN 
Sbjct: 344 ITRIETILEAARSRGIDLNTVAYNSGIKSYLSFGDYEKALELYTSMRESNVKPDAVTYNI 403

Query: 183 LIKGYGIAGKPEESVKLLDLM--SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMA 240
           LI G    GK  ES++  + M  S+  + K               E  ++EA +    M 
Sbjct: 404 LISGSSKLGKYTESLRFFEDMVDSKVSSTK---------------EGKLSEAESTFSSMK 448

Query: 241 ASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIK 300
            SG  PDV+TY T+  AY   G   +A ++  EME NG+ P+   C  ++  + K G+ +
Sbjct: 449 KSGCFPDVLTYTTLIQAYNAGGGWKRAWDLFKEMEVNGIPPDAIICSSLMEAFNKGGEPE 508

Query: 301 EALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIM 360
             L+    MK+  +  N   +  +I     I D     E++  +     +  V T + ++
Sbjct: 509 RVLQLMEFMKKKSIPLNQKSYFEIIASCTMIRDWKTASEMIEYLDSSLSSISVGTLNHVL 568

Query: 361 NAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH 420
           N     G  +   ++F  M  +        Y+++ +  +   +  K  E+L  M +SG H
Sbjct: 569 NFLGKCGKTENMMKLFYKMVTSCSTVGLSTYAVVLRNLLVVGKWRKYIEVLQWMEDSGVH 628

Query: 421 PNVVIFTTIISGWCSDGSMDRAIEVFDKM 449
           P + +F  ++     +  MD A  + +K+
Sbjct: 629 PTLYMFQNVLPYIWRENGMDFAATMQEKI 657


>gi|357454999|ref|XP_003597780.1| Beta-D-galactosidase [Medicago truncatula]
 gi|357455013|ref|XP_003597787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355486828|gb|AES68031.1| Beta-D-galactosidase [Medicago truncatula]
 gi|355486835|gb|AES68038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 214/437 (48%), Gaps = 4/437 (0%)

Query: 69  CR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGH-KPSLVTYTTLLAALTIQKRFNSI 126
           CR T  +   ++  L++ G  ++   ++N +   GH  P  VTY+ L++A     R +S 
Sbjct: 191 CRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVTYSALISAFGKLNRDDSA 250

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
             +  +++ENG+ P +  +  ++  + + G +EEA++   +M+     PT  TY  LI+G
Sbjct: 251 VRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEMRMRRCVPTVYTYTELIRG 310

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
            G +G+ E++  +   M ++G  KP++   N L+        + EA  +  +M      P
Sbjct: 311 LGKSGRVEDAYGVYKNMLKDG-CKPDVVLMNNLINILGRSDRLKEAVELFEEMRLLNCTP 369

Query: 247 DVVTYNTI-ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           +VVTYNTI  + +       +A   +  M+ +GV P+  T  I+I G+CK  ++++AL  
Sbjct: 370 NVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSFTYSILIDGFCKTNRVEKALLL 429

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWST 365
              M E G  P    +  LI    +    +  +E+   +KE   +  V  Y+ ++  +  
Sbjct: 430 LEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKENCGSSSVRVYAVMIKHFGK 489

Query: 366 AGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVI 425
            G  ++   +F++M K G  PD +AY+ L  G VR    ++A  L  TM E+G +P++  
Sbjct: 490 CGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDEAFSLFRTMEENGCNPDINS 549

Query: 426 FTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMK 485
              I++G    G   RA+E+F KM    + P+  ++ T++   S A     A ++++ M 
Sbjct: 550 HNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLGCLSRAGLFEEATKLMKEMN 609

Query: 486 AFGVHPQKSTFLLLAEA 502
           + G      T+  + EA
Sbjct: 610 SKGFEYDLITYSSILEA 626



 Score =  133 bits (334), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 104/441 (23%), Positives = 189/441 (42%), Gaps = 42/441 (9%)

Query: 121 KRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTST 179
           K  N   SI  QV+     P +  +N+VI    + G+ E+  + + +M   G   P T T
Sbjct: 174 KMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCFPDTVT 233

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           Y+ LI  +G   + + +V+L D M +E  ++P  + Y  L+  +     + EA N++H+M
Sbjct: 234 YSALISAFGKLNRDDSAVRLFDEM-KENGLQPTAKIYTTLMGIYFKLGKVEEALNLVHEM 292

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
                 P V TY  +     ++G  + A  V   M  +G +P+      +I+   +  ++
Sbjct: 293 RMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGRSDRL 352

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV---LALMKEFRVNPDVITY 356
           KEA+     M+     PN+V +N +IK   E  D+    E    L  MK+  V P   TY
Sbjct: 353 KEAVELFEEMRLLNCTPNVVTYNTIIKSLFE--DKAPPSEASSWLERMKKDGVVPSSFTY 410

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           S +++ +     ++K   + ++M + G  P   AY  L     + +  E A EL   + E
Sbjct: 411 SILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINSLGKAKRYEAANELFQELKE 470

Query: 417 S-----------------------------------GFHPNVVIFTTIISGWCSDGSMDR 441
           +                                   G  P+V  +  +I+G      MD 
Sbjct: 471 NCGSSSVRVYAVMIKHFGKCGRFNEAMGLFNEMKKLGCIPDVYAYNALITGMVRADMMDE 530

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A  +F  M E+G +P++ +   ++ G +    P RA E+   MK+  + P   ++  +  
Sbjct: 531 AFSLFRTMEENGCNPDINSHNIILNGLARTGGPKRAMEMFAKMKSSTIKPDAVSYNTVLG 590

Query: 502 ARRATGLTKEAKRILSKIKNK 522
                GL +EA +++ ++ +K
Sbjct: 591 CLSRAGLFEEATKLMKEMNSK 611



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/328 (20%), Positives = 137/328 (41%), Gaps = 2/328 (0%)

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
           ++      ++ N + +  TY  L+R     + + E W  +  M  S         + I  
Sbjct: 109 IQFFKWAGKKRNFEHDSTTYMALIRCLDENRLVGELWRTIQDMVKSPCAIGPSELSEIVK 168

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYG-VH 315
              +    ++A  +  +++    +P   T   +I    +EG  ++       M   G   
Sbjct: 169 ILGRVKMVNKALSIFYQVKGRKCRPTAGTYNSVILMLMQEGHHEKVHELYNEMCSEGHCF 228

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           P+ V ++ LI  F ++   D    +   MKE  + P    Y+T+M  +   G +++   +
Sbjct: 229 PDTVTYSALISAFGKLNRDDSAVRLFDEMKENGLQPTAKIYTTLMGIYFKLGKVEEALNL 288

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
             +M      P  + Y+ L +G  +    E A  +   M++ G  P+VV+   +I+    
Sbjct: 289 VHEMRMRRCVPTVYTYTELIRGLGKSGRVEDAYGVYKNMLKDGCKPDVVLMNNLINILGR 348

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQ-PWRAEEILQIMKAFGVHPQKS 494
              +  A+E+F++M     +PN+ T+ T++    E +  P  A   L+ MK  GV P   
Sbjct: 349 SDRLKEAVELFEEMRLLNCTPNVVTYNTIIKSLFEDKAPPSEASSWLERMKKDGVVPSSF 408

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
           T+ +L +    T   ++A  +L ++  K
Sbjct: 409 TYSILIDGFCKTNRVEKALLLLEEMDEK 436


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 212/463 (45%), Gaps = 36/463 (7%)

Query: 72   VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
            V    +L+  L+E+ +  +A+ +++ ++         +   L+  L +++R      ++ 
Sbjct: 943  VTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIE 1002

Query: 132  QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
                 G  P  +F+N +I+ +   G+M   +    +M+ +G  PT  TY +LI   G  G
Sbjct: 1003 ARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKG 1062

Query: 192  KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
              E+   L   M + G   PN++ YN ++ A CN ++ T+A  ++ +M ASG  PD++T+
Sbjct: 1063 DLEKIGSLFLEMRKRG-FSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITF 1121

Query: 252  NTIATAYAQNGEADQAE-----------------------------------EVIVEMEH 276
            NT+ T     G   +AE                                   +++VEM  
Sbjct: 1122 NTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMG 1181

Query: 277  NGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDG 336
             G  P+  T G +I G    GK+ EAL     M E  V P++ I+N+LI G  +      
Sbjct: 1182 RGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPA 1241

Query: 337  VDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAK 396
               +L  M E  V PD   Y+T+++ +  +  +   ++IF+ M   G+ PD  + + + K
Sbjct: 1242 AKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIK 1301

Query: 397  GYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSP 456
            GY +     +A   +  M + G  P+   +TT+ISG+   G+++ A+     M +    P
Sbjct: 1302 GYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKP 1361

Query: 457  NLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
            N+ T+ +L+ GY +      AE +   M+A  + P   T+ +L
Sbjct: 1362 NVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTIL 1404



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 188/423 (44%), Gaps = 3/423 (0%)

Query: 78   LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
            L++    RG       +   +   G  P+LVTY +L+  L  +     I S+  ++ + G
Sbjct: 1019 LIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRG 1078

Query: 138  MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
              P+   +N+VI+A     +  +AM    +M  SG  P   T+NTLI G    G   ++ 
Sbjct: 1079 FSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAE 1138

Query: 198  KLL-DLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
              L + + RE N  PN  +Y  L+  +C    +  A +++ +M   G  PDVVT+  +  
Sbjct: 1139 HFLREAIRRELN--PNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIH 1196

Query: 257  AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
                 G+  +A  V  +M    V P+     ++ISG CK+  +  A      M E  V P
Sbjct: 1197 GLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQP 1256

Query: 317  NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
            +  ++  LI GF+   +     ++   M+   V PD+++ + ++  +   G M +     
Sbjct: 1257 DEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCM 1316

Query: 377  DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
             +M K G  PD   Y+ +  GY ++     A   L  MI+    PNVV ++++I+G+C  
Sbjct: 1317 SNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKT 1376

Query: 437  GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
            G  D A  +F  M    +SPN+ T+  L+    +  +  RA    + M      P   T 
Sbjct: 1377 GDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTL 1436

Query: 497  LLL 499
              L
Sbjct: 1437 HYL 1439



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 113/492 (22%), Positives = 214/492 (43%), Gaps = 24/492 (4%)

Query: 72   VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
            V+    ++++L       +A  I   +   G  P ++T+ TL+  L  +         + 
Sbjct: 1083 VQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLR 1142

Query: 132  QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +     ++P+ + +  +I+ F   G +  A D   +M   G TP   T+  LI G  +AG
Sbjct: 1143 EAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAG 1202

Query: 192  KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
            K  E++ + + M+ E  V P++  YNVL+   C ++ +  A N++ +M    ++PD   Y
Sbjct: 1203 KVSEALIVREKMT-ERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVY 1261

Query: 252  NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
             T+   + ++     A ++   MEH GV P+  +C  +I GYC+ G + EA+     M++
Sbjct: 1262 ATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRK 1321

Query: 312  YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
             G  P+   +  +I G+ +  + +G    L  M + +  P+V+TYS+++N +   G  D 
Sbjct: 1322 VGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDS 1381

Query: 372  CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
             + +F +M    + P+   Y+IL     ++ +  +A     TM+ +   PN V    +++
Sbjct: 1382 AEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVN 1441

Query: 432  GW-----------CSDGS----MDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
            G            C + S     D  + VF K+      P    +  +++          
Sbjct: 1442 GLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLRE 1501

Query: 477  AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPV 536
            A +    M   G  P   TFL L     + G +   + IL         NE + EE   +
Sbjct: 1502 ALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNWRTILP--------NEFQQEEFEII 1553

Query: 537  ESLERLYHKEAT 548
               + L+ + AT
Sbjct: 1554 FRYKFLFDQYAT 1565



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 197/419 (47%), Gaps = 2/419 (0%)

Query: 105  PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
            P+ + ++TLL  L   +RF+++   +  +   G  P      A++ A++++G + +A + 
Sbjct: 870  PTPLAHSTLLRLLARSRRFDAVDDTLQSMSLAGAAPTRACLGALVAAYADAGMLGKATEM 929

Query: 165  FWKMKES-GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAW 223
              +++E  G  P  +  N L+K      + +++ KL D M  + +   N  T  VLVR  
Sbjct: 930  CERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTC-VLVRGL 988

Query: 224  CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
            C E+ + E   ++     +G  P VV YN +   Y + G+  +   ++ EME NG  P  
Sbjct: 989  CLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTL 1048

Query: 284  RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
             T G +I+   K+G +++       M++ G  PN+ I+N +I              +L  
Sbjct: 1049 VTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQ 1108

Query: 344  MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
            M     +PD+IT++T++      G + K +    +  +  + P+  +Y+ L  G+    E
Sbjct: 1109 MFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGE 1168

Query: 404  PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
               A +LL+ M+  G  P+VV F  +I G    G +  A+ V +KM E  V P++  +  
Sbjct: 1169 LMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNV 1228

Query: 464  LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            L+ G  + R    A+ IL+ M    V P +  +  L +    +    +A++I   +++K
Sbjct: 1229 LISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHK 1287



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 140/328 (42%), Gaps = 8/328 (2%)

Query: 200  LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS-GMKPDVVTYNTIATAY 258
            L  MS  G   P       LV A+ +   + +A  +  ++    G  P+V   N +    
Sbjct: 895  LQSMSLAG-AAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLL 953

Query: 259  AQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNL 318
             +    D A ++  EM       +  +  +++ G C E +++E L+        G  P++
Sbjct: 954  VEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHV 1013

Query: 319  VIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEI 375
            V +N+LI G+     R  +   L L+ E   N   P ++TY +++N     G ++K   +
Sbjct: 1014 VFYNVLIDGYCR---RGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSL 1070

Query: 376  FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            F +M K G  P+   Y+ +       +   +A  +L  M  SG  P+++ F T+I+G C 
Sbjct: 1071 FLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCH 1130

Query: 436  DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            +G + +A     +     ++PN  ++  L+ G+    +   A ++L  M   G  P   T
Sbjct: 1131 EGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVT 1190

Query: 496  FLLLAEARRATGLTKEAKRILSKIKNKE 523
            F  L       G   EA  +  K+  ++
Sbjct: 1191 FGALIHGLVVAGKVSEALIVREKMTERQ 1218



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 54/270 (20%), Positives = 106/270 (39%), Gaps = 21/270 (7%)

Query: 62   FCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQK 121
            F  +K  C  + S   ++    + G   EA    +N+ + G  P   TYTT+++    Q 
Sbjct: 1283 FMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQG 1342

Query: 122  RFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN 181
              N     +  + +    P+ + ++++IN + ++G+ + A   F  M+   L+P   TY 
Sbjct: 1343 NLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYT 1402

Query: 182  TLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAA 241
             LI                 L  ++  ++  L  +  ++   C+  ++T     +H +  
Sbjct: 1403 ILIG---------------SLFKKDKVLRAGL-YFETMLLNHCSPNDVT-----LHYLVN 1441

Query: 242  SGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
                      N+I    ++    D    V  ++  +   P       II   C+   ++E
Sbjct: 1442 GLTSCTPCVINSICCNTSEVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLRE 1501

Query: 302  ALRFARTMKEYGVHPNLVIFNLLIKGFVEI 331
            AL F   M + G  PN + F  L+ GF  +
Sbjct: 1502 ALDFKNRMAKKGYVPNPITFLSLLYGFCSV 1531


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 214/481 (44%), Gaps = 24/481 (4%)

Query: 64  MNKESCRTVRSM-TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  E C    S+   L++S         A  + N +   G  P  V Y   + ++  Q++
Sbjct: 168 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 227

Query: 123 FNS--IHSIMSQVEENGMDPDSIFFNAVINAFSES----GNMEEAMDTFWKMKESGLTPT 176
             S  +  +  ++    +  + +     +  F+      G  ++A     +M   G  P 
Sbjct: 228 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPD 287

Query: 177 TSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
           TSTY+ +I     A K E++  L   M   G V P++ TY +L+ ++C    I +A  + 
Sbjct: 288 TSTYSKVITFLCHATKVEKAFLLFQEMKMVG-VTPDVYTYTILIDSFCKAGLIEQAQWLF 346

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
            +M + G  P VVTY  +  AY +  +  QA ++   M   G +PN  T G ++ G CK 
Sbjct: 347 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 406

Query: 297 GKIKEALR-FARTM---------------KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           G I +A   +A+ +                 + + PN+V +  L+ G  +    D   E+
Sbjct: 407 GNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHEL 466

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L  M      P+ I Y  +++ +  AG +D  +E+F  M K G  P  H Y+ L     +
Sbjct: 467 LDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFK 526

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
           +   + A ++L  M++    PNVV +T +I G C  G  ++A+++   M E G SPN+ T
Sbjct: 527 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 586

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  L+ G  +A +   + ++   M   G  P   T+ +L     A GL  +A+ +L ++K
Sbjct: 587 YTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK 646

Query: 521 N 521
            
Sbjct: 647 Q 647



 Score =  155 bits (391), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 109/476 (22%), Positives = 205/476 (43%), Gaps = 55/476 (11%)

Query: 98  LIEGGHKPSLVTYTTLLAALT----------IQK----------RFNS---IHSI----- 129
           L + G++PS VTY  L+  L+          +QK          RF      H++     
Sbjct: 31  LKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGR 90

Query: 130 ----MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
               +  +E      D++    +I+   E+   +EAM    +M+ +   P   TY TL+ 
Sbjct: 91  WADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLS 150

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G+    +     +++++M  EG   PN   +N LV ++CNEK+   A+ ++++M   G  
Sbjct: 151 GFLKKKQLGWCKRIINMMMTEG-CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCP 209

Query: 246 PDVVTYNTIATAYAQNGE------ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
           P  V YN    +     +       D AE++  EM       N           C  GK 
Sbjct: 210 PGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKF 269

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTI 359
            +A +  + M   G  P+   ++ +I         +    +   MK   V PDV TY+ +
Sbjct: 270 DKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTIL 329

Query: 360 MNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGF 419
           ++++  AG +++ + +F++M   G  P    Y+ L   Y++ ++  +A ++   M+++G 
Sbjct: 330 IDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGC 389

Query: 420 HPNVVIFTTIISGWCSDGSMDRAIEVFDKM--------------CE--HGVSPNLKTFET 463
            PN V +  ++ G C  G++ +A EV+ K+              CE  H ++PN+ T+  
Sbjct: 390 RPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGA 449

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           L+ G  +A +   A E+L  M + G  P    +  L +     G    A+ +  ++
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 208/468 (44%), Gaps = 29/468 (6%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  +A  +   ++  G  P   TY+ ++  L    +      +  +++  G+ PD   +
Sbjct: 267 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 326

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             +I++F ++G +E+A   F +M+  G +PT  TY  LI  Y  A +  ++  +   M  
Sbjct: 327 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 386

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG----------------MKPDVV 249
            G  +PN  TY  LV   C   NI++A+ V  K+  +                 + P+VV
Sbjct: 387 AG-CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 445

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +     +  + D A E++  M  +G +PN      +I G+CK GKI  A      M
Sbjct: 446 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 505

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            + G  P++  +  LI    +    D   +VL+ M +    P+V+TY+ +++     G  
Sbjct: 506 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGES 565

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +K  ++   M + G  P+   Y+ L  G  +  + + + +L   M   G  PN V +  +
Sbjct: 566 EKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 625

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I+  C+ G +D+A  +  +M +      L+ +   + G+S++     +  IL+ M+++G 
Sbjct: 626 INHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIA--SLGILEEMESYGT 683

Query: 490 HPQKSTFLLLAEARRATG-------LTKEAKRILSKIKNKERTNEMEA 530
            P    + +L +     G       L KE   + S +K     N+M A
Sbjct: 684 VPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTD---NDMYA 728



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 174/375 (46%), Gaps = 9/375 (2%)

Query: 86  GKPQEAQAIFNNLIEGGH--KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
           G    A + F    E  H   P++VTY  L+  L    + +  H ++  +  +G +P+ I
Sbjct: 421 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI 480

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            ++A+I+ F ++G ++ A + F +M + G  P+  TY +LI      G+ + ++K+L  M
Sbjct: 481 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 540

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            ++ +  PN+ TY  ++   C      +A  ++  M   G  P+VVTY  +     + G+
Sbjct: 541 LKD-SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 599

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D + ++  +M   G  PN  T  ++I+  C  G + +A      MK+      L  +  
Sbjct: 600 IDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRC 659

Query: 324 LIKGFVE-IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK- 381
            I+GF +  +   G+   L  M+ +   P    Y  +++ +S AG ++   E+  +M + 
Sbjct: 660 AIQGFSKSFIASLGI---LEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEV 716

Query: 382 -AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
            + +K D   Y+ L +      + E+A  L   M   GF P + +F  +I G       D
Sbjct: 717 PSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWD 776

Query: 441 RAIEVFDKMCEHGVS 455
            A+++   +C  GV+
Sbjct: 777 EALQLCYGICHEGVN 791



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 125/267 (46%), Gaps = 5/267 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + T L++ + + G+   A  + + +++    P++VTYT ++  L           ++
Sbjct: 513 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 572

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S +EE G  P+ + + A+I+   ++G ++ ++D F +M   G +P   TY  LI     A
Sbjct: 573 SLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAA 632

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +++  LL  M ++      L+ Y   ++ +   K+   +  ++ +M + G  P    
Sbjct: 633 GLLDKARLLLGEM-KQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPV 689

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEH--NGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           Y  +   +++ G  + A E+  EM    + V+ +      +I   C   +++EA R    
Sbjct: 690 YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSE 749

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRD 335
           M   G  P L +F  LIKG VE+   D
Sbjct: 750 MTRRGFVPELSVFVCLIKGLVEVKKWD 776



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 110/255 (43%), Gaps = 35/255 (13%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K+SC   V + T +++ L   G+ ++A  + + + E G  P++VTYT L+  L    +
Sbjct: 540 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 599

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM-------DTFW--------- 166
            +    + +Q+   G  P+ + +  +IN    +G +++A         T+W         
Sbjct: 600 IDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRC 659

Query: 167 -----------------KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGN 208
                            +M+  G  P    Y  LI  +  AG+ E +++L  ++M    +
Sbjct: 660 AIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSS 719

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           VK +   Y  L++A C    + EA+ +  +M   G  P++  +  +     +  + D+A 
Sbjct: 720 VKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 779

Query: 269 EVIVEMEHNGVQPNG 283
           ++   + H GV   G
Sbjct: 780 QLCYGICHEGVNWQG 794


>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 554

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 220/456 (48%), Gaps = 16/456 (3%)

Query: 64  MNKESCRTVR-SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M++ +CR       + +  LI   +   A   ++ +   G   S  TY+  +  L   K 
Sbjct: 35  MSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQMGTRGFSLSSFTYSRFITGLCKVKN 94

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
           F  I  ++  +E     PD   FN  ++     G ++ A++ F K+ ++G  P   TY  
Sbjct: 95  FTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTI 154

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           +I G     K + +++    M  +G   P+ +    +V   C+ + +  A+ ++  +  S
Sbjct: 155 IIHGVCKIKKFDTAIQFWRDMIHKG-FSPDNKACGAIVVGLCDGRKVDLAYELIIDVMKS 213

Query: 243 G-MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
           G +K   + YN + + + + G  D+A+ +   M  NG +P+  T  + ++ +C E  + +
Sbjct: 214 GRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCDELMLDD 273

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNP----DVITYS 357
           A +  + M+  G+ P++  +N L+KG   I   +  D+   LM   ++ P    DV++Y+
Sbjct: 274 AKKLLKLMERSGIEPDVYSYNQLLKG---ICKGNCPDKAYLLMTN-KMWPKGLCDVVSYN 329

Query: 358 TIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIES 417
           TI+ A+   G      ++F++MG+ GI PD   ++I  K ++ +     A++LL  M E 
Sbjct: 330 TIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEM 389

Query: 418 GFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRA 477
           G  P+ + +TTII   C  G ++ A  +F  M E G+SP++ +F  L+ G+ +  +   A
Sbjct: 390 GLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEA 449

Query: 478 EEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
             + + M+  G +P + T+ L+       GL +E K
Sbjct: 450 MHLYEEMQNRGSYPDEVTYKLI-----IGGLIEEKK 480



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/397 (26%), Positives = 194/397 (48%), Gaps = 12/397 (3%)

Query: 79  MNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGM 138
           ++ L   G+   A  +F  +++ G KP +VTYT ++  +   K+F++       +   G 
Sbjct: 121 LHLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGF 180

Query: 139 DPDSIFFNAVINAFSESGNMEEAMDTFWKMKESG-LTPTTSTYNTLIKGYGIAGKPEESV 197
            PD+    A++    +   ++ A +    + +SG +  +T  YN LI G+  AG+ +++ 
Sbjct: 181 SPDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQ 240

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            +   M R G  +P+L TYNV +  +C+E  + +A  ++  M  SG++PDV +YN +   
Sbjct: 241 AIKSFMRRNG-CEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKG 299

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGI-----IISGYCKEGKIKEALRFARTMKEY 312
             +    D+A  ++     N + P G  C +     II  +CK G    A +    M + 
Sbjct: 300 ICKGNCPDKAYLLMT----NKMWPKG-LCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQK 354

Query: 313 GVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKC 372
           G+ P++V F + IK F+     +   ++L  M E  ++PD I Y+TI++    +G ++  
Sbjct: 355 GIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMA 414

Query: 373 KEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISG 432
             IF DM + GI PD  +++ L  G+ +     +A  L   M   G +P+ V +  II G
Sbjct: 415 HSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGG 474

Query: 433 WCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
              +  +  A  V+ +M + G + +    +TL+ G S
Sbjct: 475 LIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRGNS 511



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 109/459 (23%), Positives = 188/459 (40%), Gaps = 42/459 (9%)

Query: 101 GGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEE 160
           G H+   + Y + +A        +    +  ++ ++     SI +N  I         + 
Sbjct: 6   GAHR---LIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDL 62

Query: 161 AMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLV 220
           A   + +M   G + ++ TY+  I G           +LL  M    N  P++  +N+ +
Sbjct: 63  ANHYYSQMGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETL-NCLPDIWAFNIYL 121

Query: 221 RAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQ 280
                E  I  A  V  K+  +G KPDVVTY  I     +  + D A +   +M H G  
Sbjct: 122 HLLFVEGRIDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFS 181

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFA-RTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDE 339
           P+ + CG I+ G C   K+  A       MK   V  + +++N LI GF      D    
Sbjct: 182 PDNKACGAIVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQA 241

Query: 340 VLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
           + + M+     PD++TY+  +N +     +D  K++   M ++GI+PD ++Y+ L KG  
Sbjct: 242 IKSFMRRNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGIC 301

Query: 400 REQEPEKAEELLMT------------------------------------MIESGFHPNV 423
           +   P+KA  LLMT                                    M + G  P+V
Sbjct: 302 KGNCPDKAY-LLMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDV 360

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           V FT  I  +   GS + A ++ D+M E G+SP+   + T++    ++ +   A  I   
Sbjct: 361 VTFTIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCD 420

Query: 484 MKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
           M   G+ P   +F  L           EA  +  +++N+
Sbjct: 421 MVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQNR 459



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 31/139 (22%), Positives = 64/139 (46%), Gaps = 3/139 (2%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T +++ L + GK + A +IF +++E G  P ++++  L+       R +    +  +++ 
Sbjct: 399 TTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRVSEAMHLYEEMQN 458

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  PD + +  +I    E   +  A   + +M + G T   +   TLI+G  I  +   
Sbjct: 459 RGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTLIRGNSI--ENAS 516

Query: 196 SVKLLDLMSREGNVKPNLR 214
           + + LD    + N  P+ R
Sbjct: 517 TSRCLDFKFHQ-NYSPSFR 534


>gi|145353743|ref|XP_001421164.1| predicted protein [Ostreococcus lucimarinus CCE9901]
 gi|144581400|gb|ABO99457.1| predicted protein [Ostreococcus lucimarinus CCE9901]
          Length = 683

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 208/438 (47%), Gaps = 32/438 (7%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSIMSQVEENGMDPDSIFFNAVINAFSESG 156
           LI  GH+P+  T+T +++ L    R   ++  ++  +EE G D D   +NAV +AF   G
Sbjct: 140 LIRDGHRPTAKTFTAVISTLGAMGRAKEALDDVLPMIEEYGDDVDVAVWNAVAHAFCAGG 199

Query: 157 NMEEAMDTFWKM-KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
           +   A     +M  E G+    +T+  +I  Y   G+     +L+  MS E  + P+ R 
Sbjct: 200 DPAGAEKIVDRMVGEDGVGVNGATHPEIIYTYAKRGEANRVYRLIRRMSSEHGIIPDERA 259

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           YN  +R  C   ++ +A  V+ +            +N     +    ++D+   V     
Sbjct: 260 YNAFLRGLCERDDLEDAEEVLRR------------WNN--EKFDLERQSDRGGRV----- 300

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
               +P+  + G++I  + + G +  A +  + M+   + P+L +FN+LI G+++  +  
Sbjct: 301 ---SKPSAASYGLLIDAWTRRGNMLAARKLLQQMQWERIAPSLPLFNMLIDGYLKQENMR 357

Query: 336 GVDEVLAL--------MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             + +           M+   + PD +TY+  ++ W+  G +D C+ IF+ M +  + PD
Sbjct: 358 AAEGLFRELESSGTWDMESLGIKPDNVTYTLFLDYWANQGQVDACERIFNRMHRKEVAPD 417

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
             AY  L K Y R ++ + AE +L  + E+   P+V I++ +++  C+ G+M RA +V +
Sbjct: 418 VTAYGTLVKAYARARDSDGAEAVLDRLAEAKVAPSVAIYSAVVAAHCTIGNMSRARDVLE 477

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           +M + G+ PN +TF    WGY +        E+ ++M A G+  + +    +  A    G
Sbjct: 478 RMFDAGLRPNERTFAHFAWGYGQLEDINGIAEVAKLMLASGLKLKGANRTAIVRACEECG 537

Query: 508 LTKEAKRILSKIKNKERT 525
           ++  A + L    N E T
Sbjct: 538 MSMSAVQALLDRINPEMT 555


>gi|15233142|ref|NP_191058.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210358|sp|Q9SV46.1|PP282_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g54980, mitochondrial; Flags: Precursor
 gi|4678295|emb|CAB41086.1| putative protein [Arabidopsis thaliana]
 gi|28393168|gb|AAO42016.1| unknown protein [Arabidopsis thaliana]
 gi|332645801|gb|AEE79322.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 851

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 226/476 (47%), Gaps = 43/476 (9%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T ++ + +++G   +A  + + ++  G   ++V  T+L+          S   +  ++E+
Sbjct: 308 TSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEK 367

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P+S+ F+ +I  F ++G ME+A++ + KM+  GLTP+    +T+I+G+    K EE
Sbjct: 368 EGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEE 427

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           ++KL D     G    N+   N ++   C +    EA  ++ KM + G+ P+VV+YN + 
Sbjct: 428 ALKLFDESFETG--LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVM 485

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             + +    D A  V   +   G++PN  T  I+I G  +    + AL     M    + 
Sbjct: 486 LGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIE 545

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFR--------------------------- 348
            N V++  +I G  ++       E+LA M E +                           
Sbjct: 546 VNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVA 605

Query: 349 ---------VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYV 399
                    ++P+VITY+++MN       MD+  E+ D+M   G+K D  AY  L  G+ 
Sbjct: 606 AYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFC 665

Query: 400 REQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLK 459
           +    E A  L   ++E G +P+  I+ ++ISG+ + G+M  A++++ KM + G+  +L 
Sbjct: 666 KRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLG 725

Query: 460 TFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           T+ TL+ G  +      A E+   M+A G+ P +  + ++       GL+K+ + +
Sbjct: 726 TYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVI-----VNGLSKKGQFV 776



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 202/403 (50%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           +++ L ++GK  EA  + + +   G  P++V+Y  ++     QK  +    + S + E G
Sbjct: 449 ILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKG 508

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P++  ++ +I+    + + + A++    M  S +      Y T+I G    G+  ++ 
Sbjct: 509 LKPNNYTYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKAR 568

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           +LL  M  E  +  +  +YN ++  +  E  +  A     +M  +G+ P+V+TY ++   
Sbjct: 569 ELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNG 628

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +N   DQA E+  EM++ GV+ +    G +I G+CK   ++ A      + E G++P+
Sbjct: 629 LCKNNRMDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPS 688

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
             I+N LI GF  + +     ++   M +  +  D+ TY+T+++     G +    E++ 
Sbjct: 689 QPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLILASELYT 748

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G+ PD   Y+++  G  ++ +  K  ++   M ++   PNV+I+  +I+G   +G
Sbjct: 749 EMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREG 808

Query: 438 SMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
           ++D A  + D+M + G+ P+  TF+ L+ G     QP RA  +
Sbjct: 809 NLDEAFRLHDEMLDKGILPDGATFDILVSGQVGNLQPVRAASL 851



 Score =  132 bits (333), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/487 (21%), Positives = 208/487 (42%), Gaps = 70/487 (14%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+   L+N+  +  +   A  I N ++E    P        L+AL  +        + S+
Sbjct: 164 RAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLSALVQRNSLTEAKELYSR 223

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +   G+D D++    ++ A        EA++   +  E G  P +  Y+  ++       
Sbjct: 224 MVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLD 283

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
              +  LL  M  +    P+  TY  ++ A   + N+ +A  +  +M + G+  +VV   
Sbjct: 284 LAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAAT 343

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           ++ T + +N +   A  +  +ME  G  PN  T  ++I  + K G++++AL F + M+  
Sbjct: 344 SLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVL 403

Query: 313 GVHPNLVIFNLLIKGF---------VEIMDR-------------------------DGVD 338
           G+ P++   + +I+G+         +++ D                          D   
Sbjct: 404 GLTPSVFHVHTIIQGWLKGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQGKTDEAT 463

Query: 339 EVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           E+L+ M+   + P+V++Y+ +M        MD  + +F ++ + G+KP+ + YSIL  G 
Sbjct: 464 ELLSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGC 523

Query: 399 VREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC------------------------ 434
            R  + + A E++  M  S    N V++ TII+G C                        
Sbjct: 524 FRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVS 583

Query: 435 ------------SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQ 482
                        +G MD A+  +++MC +G+SPN+ T+ +LM G  +  +  +A E+  
Sbjct: 584 CMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRD 643

Query: 483 IMKAFGV 489
            MK  GV
Sbjct: 644 EMKNKGV 650



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 71/264 (26%), Positives = 131/264 (49%), Gaps = 1/264 (0%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           K  C +  S   +++   + G+   A A +  +   G  P+++TYT+L+  L    R + 
Sbjct: 578 KRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQ 637

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIK 185
              +  +++  G+  D   + A+I+ F +  NME A   F ++ E GL P+   YN+LI 
Sbjct: 638 ALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLIS 697

Query: 186 GYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMK 245
           G+   G    ++ L   M ++G ++ +L TY  L+     + N+  A  +  +M A G+ 
Sbjct: 698 GFRNLGNMVAALDLYKKMLKDG-LRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLV 756

Query: 246 PDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRF 305
           PD + Y  I    ++ G+  +  ++  EM+ N V PN      +I+G+ +EG + EA R 
Sbjct: 757 PDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRL 816

Query: 306 ARTMKEYGVHPNLVIFNLLIKGFV 329
              M + G+ P+   F++L+ G V
Sbjct: 817 HDEMLDKGILPDGATFDILVSGQV 840



 Score =  115 bits (289), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 95/392 (24%), Positives = 173/392 (44%), Gaps = 10/392 (2%)

Query: 112 TLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES 171
           T +A++ + K  +S  S        G + +S  FN ++NA+S+    + A+D   +M E 
Sbjct: 140 TPMASVLVSKLVDSAKSF-------GFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLEL 192

Query: 172 GLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITE 231
            + P     N  +          E+ +L   M   G    N+ T  +L+RA   E+   E
Sbjct: 193 DVIPFFPYVNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTT-QLLMRASLREEKPAE 251

Query: 232 AWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEM-EHNGVQPNGRTCGIII 290
           A  V+ +    G +PD + Y+    A  +  +   A  ++ EM E     P+  T   +I
Sbjct: 252 ALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVI 311

Query: 291 SGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
               K+G + +A+R    M   G+  N+V    LI G  +  D      +   M++   +
Sbjct: 312 LASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPS 371

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P+ +T+S ++  +   G M+K  E +  M   G+ P       + +G+++ Q+ E+A +L
Sbjct: 372 PNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKL 431

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
                E+G   NV +  TI+S  C  G  D A E+  KM   G+ PN+ ++  +M G+  
Sbjct: 432 FDESFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCR 490

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEA 502
            +    A  +   +   G+ P   T+ +L + 
Sbjct: 491 QKNMDLARIVFSNILEKGLKPNNYTYSILIDG 522



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 84/377 (22%), Positives = 155/377 (41%), Gaps = 19/377 (5%)

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE--ESVKLLD-LMSREGNV 209
           SE+ + E+ +  +    E    P TS  + L      + KPE  +   ++D L++R  N 
Sbjct: 35  SENPSQEQRLLVYGSTSEE--NPVTSKVSLL------SAKPEQKDDASVIDVLLNRRNNP 86

Query: 210 KPNLRTYNVLVRAWCNEKNITEA-WNVMHKMAAS----GMKPDVVTYNTIATAYAQNGEA 264
           +  LR YN   R W       +  W ++H + +S    G   D++    ++T+      +
Sbjct: 87  EAALRFYN-WARPWRGSFEDGDVFWVLIHILVSSPETYGRASDLLI-RYVSTSNPTPMAS 144

Query: 265 DQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLL 324
               +++   +  G + N R    +++ Y K+ +   A+     M E  V P     N  
Sbjct: 145 VLVSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRT 204

Query: 325 IKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
           +   V+        E+ + M    V+ D +T   +M A        +  E+     + G 
Sbjct: 205 LSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAIERGA 264

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFH-PNVVIFTTIISGWCSDGSMDRAI 443
           +PD+  YS+  +   +  +   A  LL  M E     P+   +T++I      G+MD AI
Sbjct: 265 EPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNMDDAI 324

Query: 444 EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEAR 503
            + D+M   G+S N+    +L+ G+ +      A  +   M+  G  P   TF +L E  
Sbjct: 325 RLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWF 384

Query: 504 RATGLTKEAKRILSKIK 520
           R  G  ++A     K++
Sbjct: 385 RKNGEMEKALEFYKKME 401


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 223/480 (46%), Gaps = 24/480 (5%)

Query: 29  GQMIPAKKNNPGEKKQLYSNSKPTDSQPQTHCSF------------CMNKESCRTVRSMT 76
           G+M+     + G K  +Y    P +S    HC F             +NK+   TV + T
Sbjct: 426 GEMV-----DTGLKLSVY----PYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYT 476

Query: 77  KLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEEN 136
            LM     +GK  +A  +++ +   G  PS+ T+TTLL+ L           + +++ E 
Sbjct: 477 SLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEW 536

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
            + P+ + +N +I  + E G+M +A +   +M E G+ P T +Y  LI G  + G+  E+
Sbjct: 537 NVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEA 596

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
              +D + + GN + N   Y  L+  +C E  + EA +V  +M   G+  D+V Y  +  
Sbjct: 597 KVFVDGLHK-GNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLID 655

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
              ++ +      ++ EM   G++P+      +I    K G  KEA      M   G  P
Sbjct: 656 GSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVP 715

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF-MDKCKEI 375
           N V +  +I G  +    +  + + + M+     P+ +TY   ++  +     M K  E+
Sbjct: 716 NEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVEL 775

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
            + + K G+  +   Y++L +G+ R+   E+A EL+  MI  G  P+ + +TT+I+  C 
Sbjct: 776 HNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCR 834

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
              + +AIE+++ M E G+ P+   + TL+ G   A +  +A E+   M   G+ P   T
Sbjct: 835 RNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKT 894



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 216/480 (45%), Gaps = 45/480 (9%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++    RGK   A +    +++ G K S+  Y +L+         ++    M+++    
Sbjct: 408 LIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKK 467

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           ++P  + + +++  +   G + +A+  + +M   G+ P+  T+ TL+ G   AG   ++V
Sbjct: 468 LEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAV 527

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
           KL + M+ E NVKPN  TYNV++  +C E ++++A+  + +M   G+ PD  +Y  +   
Sbjct: 528 KLFNEMA-EWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHG 586

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGI-IISGYCKEGKIKEALRFARTMKEYGVHP 316
               G+A +A+ V V+  H G       C   ++ G+C+EGK++EAL   + M + GV  
Sbjct: 587 LCLTGQASEAK-VFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDL 645

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           +LV + +LI G ++  DR     +L  M +  + PD + Y+++++A S  G   +   I+
Sbjct: 646 DLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIW 705

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM---------------------- 414
           D M   G  P+   Y+ +  G  +     +AE L   M                      
Sbjct: 706 DLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKG 765

Query: 415 -------------IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTF 461
                        I  G   N   +  +I G+C  G ++ A E+  +M   GVSP+  T+
Sbjct: 766 EVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITY 825

Query: 462 ETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL-------AEARRATGLTKEAKR 514
            T++          +A E+   M   G+ P +  +  L        E  +AT L  E  R
Sbjct: 826 TTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLR 885



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/407 (24%), Positives = 195/407 (47%), Gaps = 1/407 (0%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           VR+++ L++ L++      A  +FN+++  G +P +  YT ++ +L   K  +    +++
Sbjct: 192 VRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIA 251

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
            +E  G D + + +N +I+   +   + EA+     +    L P   TY TL+ G     
Sbjct: 252 HMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQ 311

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + E  ++++D M       P+    + LV        I EA N++ ++   G+ P++  Y
Sbjct: 312 EFEIGLEMMDEMLCL-RFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVY 370

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  +  +  +  +AE +   M   G++PN  T  I+I  +C+ GK+  AL F   M +
Sbjct: 371 NALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVD 430

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDK 371
            G+  ++  +N LI G  +  D    +  +A M   ++ P V+TY+++M  + + G ++K
Sbjct: 431 TGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINK 490

Query: 372 CKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIIS 431
              ++ +M   GI P  + ++ L  G  R      A +L   M E    PN V +  +I 
Sbjct: 491 ALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIE 550

Query: 432 GWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
           G+C +G M +A E   +M E G+ P+  ++  L+ G     Q   A+
Sbjct: 551 GYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/383 (24%), Positives = 180/383 (46%), Gaps = 1/383 (0%)

Query: 140 PDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL 199
           P+    +A+++   +  +   AM+ F  M   G+ P    Y  +I+          + ++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 200 LDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYA 259
           +  M   G    N+  YNVL+   C ++ + EA  +   +A   +KPDVVTY T+     
Sbjct: 250 IAHMEATG-CDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLC 308

Query: 260 QNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLV 319
           +  E +   E++ EM      P+      ++ G  K GKI+EAL   + + ++GV PNL 
Sbjct: 309 KVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLF 368

Query: 320 IFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDM 379
           ++N LI    +       + +   M +  + P+ +TYS +++ +   G +D       +M
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428

Query: 380 GKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSM 439
              G+K   + Y+ L  G+ +  +   AE  +  MI     P VV +T+++ G+CS G +
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLL 499
           ++A+ ++ +M   G++P++ TF TL+ G   A     A ++   M  + V P + T+ ++
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548

Query: 500 AEARRATGLTKEAKRILSKIKNK 522
            E     G   +A   L ++  K
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEK 571



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 117/478 (24%), Positives = 212/478 (44%), Gaps = 36/478 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT-IQK--------------R 122
           L++ L ++ K  EA  I  +L     KP +VTY TL+  L  +Q+              R
Sbjct: 268 LIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLR 327

Query: 123 FNSIHSIMSQVEEN--------------------GMDPDSIFFNAVINAFSESGNMEEAM 162
           F+   + +S + E                     G+ P+   +NA+I++  +     EA 
Sbjct: 328 FSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAE 387

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
             F +M + GL P   TY+ LI  +   GK + ++  L  M   G +K ++  YN L+  
Sbjct: 388 LLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTG-LKLSVYPYNSLING 446

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C   +I+ A   M +M    ++P VVTY ++   Y   G+ ++A  +  EM   G+ P+
Sbjct: 447 HCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPS 506

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
             T   ++SG  + G I++A++    M E+ V PN V +N++I+G+ E  D     E L 
Sbjct: 507 IYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLK 566

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            M E  + PD  +Y  +++     G   + K   D + K   + +   Y+ L  G+ RE 
Sbjct: 567 EMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREG 626

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
           + E+A  +   M++ G   ++V +  +I G            +  +M + G+ P+   + 
Sbjct: 627 KLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYT 686

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +++   S+      A  I  +M   G  P + T+  +       G   EA+ + SK++
Sbjct: 687 SMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQ 744



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 103/410 (25%), Positives = 175/410 (42%), Gaps = 3/410 (0%)

Query: 105 PSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDT 164
           P + T + LL  L   + F     + + +   G+ PD   +  VI +  E  ++  A + 
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGNVKPNLRTYNVLVRAW 223
              M+ +G       YN LI G     K  E+V +  DL  ++  +KP++ TY  LV   
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKD--LKPDVVTYCTLVYGL 307

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C  +       +M +M      P     +++     + G+ ++A  ++  +   GV PN 
Sbjct: 308 CKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNL 367

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
                +I   CK  K  EA      M + G+ PN V +++LI  F      D     L  
Sbjct: 368 FVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGE 427

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           M +  +   V  Y++++N     G +   +    +M    ++P    Y+ L  GY  + +
Sbjct: 428 MVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGK 487

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
             KA  L   M   G  P++  FTT++SG    G +  A+++F++M E  V PN  T+  
Sbjct: 488 INKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNV 547

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
           ++ GY E     +A E L+ M   G+ P   ++  L      TG   EAK
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAK 597



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 85/375 (22%), Positives = 173/375 (46%), Gaps = 35/375 (9%)

Query: 180 YNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKM 239
           ++ LI+ Y  + +  + V +  +M  + ++ P +RT + L+      ++   A  + + M
Sbjct: 159 FDLLIQHYVRSRRVLDGVLVFKMMITKVSLLPEVRTLSALLHGLVKFRHFGLAMELFNDM 218

Query: 240 AASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKI 299
            + G++PDV  Y  +  +  +  +  +A+E+I  ME  G   N     ++I G CK+ K+
Sbjct: 219 VSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKV 278

Query: 300 KEALRFARTMKEYGVHPNLVIFNLLIKGF---------VEIMD----------------- 333
            EA+   + +    + P++V +  L+ G          +E+MD                 
Sbjct: 279 WEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSL 338

Query: 334 ------RDGVDEVLALMK---EFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGI 384
                 R  ++E L L+K   +F V+P++  Y+ ++++        + + +FD MGK G+
Sbjct: 339 VEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGL 398

Query: 385 KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIE 444
           +P+   YSIL   + R  + + A   L  M+++G   +V  + ++I+G C  G +  A  
Sbjct: 399 RPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEG 458

Query: 445 VFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARR 504
              +M    + P + T+ +LM GY    +  +A  +   M   G+ P   TF  L     
Sbjct: 459 FMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLF 518

Query: 505 ATGLTKEAKRILSKI 519
             GL ++A ++ +++
Sbjct: 519 RAGLIRDAVKLFNEM 533


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 91/379 (24%), Positives = 193/379 (50%), Gaps = 7/379 (1%)

Query: 124 NSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTL 183
           +  H ++ ++  +G+  ++  +N+++++++   N +       +M+  G+ PT  TY  L
Sbjct: 165 DDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTIL 224

Query: 184 IKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           + G   AG   +   + D M R+ NV  ++  Y+ ++ A+C   N+  A  V  +    G
Sbjct: 225 VDGLSRAGDISKVEAVYDEMKRK-NVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHG 283

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           ++P+  TY  +   + + G+ + AE ++ +M+  GV  N      +I GYC+ G +++AL
Sbjct: 284 VEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKAL 343

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
                M++ G+  ++  +N L  G   +   +   ++L +M E  V P+ ++Y+T+++  
Sbjct: 344 EIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIH 403

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
           +  G M + + +F DM   G +P    Y+++  GY++     +AE     M + G  P++
Sbjct: 404 AKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDI 463

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
             +  ++ G C +G +D A+ +F++M   G  PN+  +  L+ G +   +  R+EE  Q+
Sbjct: 464 YTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLA---KEGRSEEAFQL 520

Query: 484 ---MKAFGVHPQKSTFLLL 499
              M A G+ P  + + +L
Sbjct: 521 YDDMLAAGLTPDDTLYSVL 539



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 178/363 (49%), Gaps = 1/363 (0%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L++S   +        +   +   G +P++ TYT L+  L+     + + ++  +++   
Sbjct: 189 LLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKN 248

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           +  D  F++AVINA+   GN+  A + F +    G+ P   TY  LI G+   G+ E + 
Sbjct: 249 VAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAE 308

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
            LL  M   G V  N   +N ++  +C    + +A  +   M   G++ D+ TYNT+A  
Sbjct: 309 MLLADMQLRG-VGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACG 367

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
             +    + A++++  M   GV PN  +   +IS + KEG + EA R  R M+  G  P+
Sbjct: 368 LCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPS 427

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFD 377
           +V +N++I G+++       +     M++  + PD+ TY+ +++     G +D    +F+
Sbjct: 428 VVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFE 487

Query: 378 DMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDG 437
           +M   G KP+  AY+ L  G  +E   E+A +L   M+ +G  P+  +++ ++    +D 
Sbjct: 488 EMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDS 547

Query: 438 SMD 440
             D
Sbjct: 548 RKD 550



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 207/448 (46%), Gaps = 20/448 (4%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L  S + RG P+ A A F++++       L  Y    AA+   +  ++  S + ++    
Sbjct: 62  LAASTLPRGAPKHAVAAFHDML-------LRAYADSGAAVRAAEALDATVSRLGRL---- 110

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKES---GLTPTTSTYNTLIKGYGIAGKPE 194
              D     + + +   +G +  A D   K   S    +TP +++   ++ G+  +G  +
Sbjct: 111 ---DPRSLTSSLLSLRRAGQLPAAADLLGKAIASCPASVTPLSAS--VVVDGFCKSGSVD 165

Query: 195 ESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTI 254
           ++  LLD + R G V  N   YN L+ ++  ++N      ++ +M   G++P V TY  +
Sbjct: 166 DAHGLLDELPRHG-VGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTIL 224

Query: 255 ATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGV 314
               ++ G+  + E V  EM+   V  +      +I+ YC+ G ++ A         +GV
Sbjct: 225 VDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGV 284

Query: 315 HPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKE 374
            PN   +  LI GF +I   +  + +LA M+   V  + I ++T+++ +   G ++K  E
Sbjct: 285 EPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALE 344

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWC 434
           I   M K GI+ D + Y+ LA G  R    E A++LL  M E G  PN V +TT+IS   
Sbjct: 345 IKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHA 404

Query: 435 SDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKS 494
            +G M  A  +F  M   G  P++ T+  ++ GY +      AE   + M+  G+ P   
Sbjct: 405 KEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIY 464

Query: 495 TFLLLAEARRATGLTKEAKRILSKIKNK 522
           T+  L       G    A R+  ++K++
Sbjct: 465 TYAGLVHGHCVNGKVDVALRLFEEMKHR 492



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 69/285 (24%), Positives = 129/285 (45%), Gaps = 36/285 (12%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + ++N+    G  + A  +F+  +  G +P+  TY  L+       +  +   +++ ++ 
Sbjct: 257 SAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQL 316

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G+  + I FN +I+ +   G +E+A++    M++ G+     TYNTL  G     + E+
Sbjct: 317 RGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMED 376

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           + KLL +M+ +G V PN  +Y  L+     E ++ EA  +   M   G +P VVTYN + 
Sbjct: 377 AKKLLHIMAEKG-VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMI 435

Query: 256 TAYAQNGEADQAEE-----------------------------------VIVEMEHNGVQ 280
             Y +NG   +AE                                    +  EM+H G +
Sbjct: 436 DGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTK 495

Query: 281 PNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
           PN      ++SG  KEG+ +EA +    M   G+ P+  ++++L+
Sbjct: 496 PNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540



 Score = 53.1 bits (126), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 31/153 (20%), Positives = 71/153 (46%), Gaps = 14/153 (9%)

Query: 32  IPAKKNNPGEKKQLYSNSKPTDSQPQTHCSFCMNKESCRTVRSMTKLMNSLIERGKPQEA 91
           I AK+ +  E ++L+ + +   S+P              +V +   +++  I+ G  +EA
Sbjct: 402 IHAKEGDMVEARRLFRDMEGKGSRP--------------SVVTYNVMIDGYIKNGSIREA 447

Query: 92  QAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINA 151
           +     + + G  P + TY  L+    +  + +    +  +++  G  P+ + + A+++ 
Sbjct: 448 ERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSG 507

Query: 152 FSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
            ++ G  EEA   +  M  +GLTP  + Y+ L+
Sbjct: 508 LAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540


>gi|145357164|ref|XP_001422791.1| pentatrichopeptide repeat (PPR) protein [Ostreococcus lucimarinus
           CCE9901]
 gi|144583035|gb|ABP01150.1| pentatrichopeptide repeat (PPR) protein [Ostreococcus lucimarinus
           CCE9901]
          Length = 629

 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 109/438 (24%), Positives = 208/438 (47%), Gaps = 32/438 (7%)

Query: 98  LIEGGHKPSLVTYTTLLAALTIQKRFN-SIHSIMSQVEENGMDPDSIFFNAVINAFSESG 156
           LI  GH+P+  T+T +++ L    R   ++  ++  +EE G D D   +NAV +AF   G
Sbjct: 86  LIRDGHRPTAKTFTAVISTLGAMGRAKEALDDVLPMIEEYGDDVDVAVWNAVAHAFCAGG 145

Query: 157 NMEEAMDTFWKM-KESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
           +   A     +M  E G+    +T+  +I  Y   G+     +L+  MS E  + P+ R 
Sbjct: 146 DPAGAEKIVDRMVGEDGVGVNGATHPEIIYTYAKRGEANRVYRLIRRMSSEHGIIPDERA 205

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEME 275
           YN  +R  C   ++ +A  V+ +            +N     +    ++D+   V     
Sbjct: 206 YNAFLRGLCERDDLEDAEEVLRR------------WNN--EKFDLERQSDRGGRV----- 246

Query: 276 HNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
               +P+  + G++I  + + G +  A +  + M+   + P+L +FN+LI G+++  +  
Sbjct: 247 ---SKPSAASYGLLIDAWTRRGNMLAARKLLQQMQWERIAPSLPLFNMLIDGYLKQENMR 303

Query: 336 GVDEVLAL--------MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
             + +           M+   + PD +TY+  ++ W+  G +D C+ IF+ M +  + PD
Sbjct: 304 AAEGLFRELESSGTWDMESLGIKPDNVTYTLFLDYWANQGQVDACERIFNRMHRKEVAPD 363

Query: 388 AHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFD 447
             AY  L K Y R ++ + AE +L  + E+   P+V I++ +++  C+ G+M RA +V +
Sbjct: 364 VTAYGTLVKAYARARDSDGAEAVLDRLAEAKVAPSVAIYSAVVAAHCTIGNMSRARDVLE 423

Query: 448 KMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATG 507
           +M + G+ PN +TF    WGY +        E+ ++M A G+  + +    +  A    G
Sbjct: 424 RMFDAGLRPNERTFAHFAWGYGQLEDINGIAEVAKLMLASGLKLKGANRTAIVRACEECG 483

Query: 508 LTKEAKRILSKIKNKERT 525
           ++  A + L    N E T
Sbjct: 484 MSMSAVQALLDRINPEMT 501


>gi|255539196|ref|XP_002510663.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551364|gb|EEF52850.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 695

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 102/433 (23%), Positives = 216/433 (49%), Gaps = 3/433 (0%)

Query: 61  SFCMNKESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQ 120
           +F ++++   +  +   L+N+       ++A  + + + + G+    V Y+ ++ +L   
Sbjct: 173 AFLLSQQQALSPLTYNALINACARNNDLEKAINLISRMRQDGYPSDFVNYSLIIQSLVRS 232

Query: 121 KRFNS--IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTS 178
            R +S  +  + S+++ + ++ D    N +I  F+++G+  +AM+    ++ SGL+P T+
Sbjct: 233 NRIDSPILQKLYSEIQCDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTA 292

Query: 179 TYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
           T   +I   G +G+  E+  + + M   G +KP  R YN L++ +     + +A  ++ +
Sbjct: 293 TLIAVISALGDSGRIIEAEAIFEEMKDNG-LKPKTRAYNGLLKGYVKAGMLKDAEFIVSE 351

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M  SG+ PD  TY+ +  AY+  G  + A  V+ EME N + PN      I++ Y   G+
Sbjct: 352 MERSGVSPDECTYSLLIDAYSNAGRWESARIVLKEMEANNIMPNSYVFSRILASYRDRGE 411

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
            +++ +  + MK  GV P+   +N++I  F +    D   +    M    + PD +T++T
Sbjct: 412 WQKSFQVLKEMKNSGVRPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNT 471

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           +++    A   ++ +E+F++M + G  P    ++I+   +  ++  +  + L+  M   G
Sbjct: 472 LIDCHCKAELHERAEELFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLG 531

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
             PNVV +TT+I  +   G    AIE  + M   G+ P+   +  L+  Y++     +A 
Sbjct: 532 LLPNVVTYTTLIDIYGKSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAV 591

Query: 479 EILQIMKAFGVHP 491
              ++M+A  + P
Sbjct: 592 NAFRLMRADSLKP 604



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 104/438 (23%), Positives = 202/438 (46%), Gaps = 5/438 (1%)

Query: 69  CRTVRSMTKLMNSLI----ERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFN 124
           C  +    +L N +I    + G P +A      +   G  P   T   +++AL    R  
Sbjct: 249 CDKLELDVQLSNDIIVGFAKAGDPNKAMEFLGMVQASGLSPRTATLIAVISALGDSGRII 308

Query: 125 SIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLI 184
              +I  ++++NG+ P +  +N ++  + ++G +++A     +M+ SG++P   TY+ LI
Sbjct: 309 EAEAIFEEMKDNGLKPKTRAYNGLLKGYVKAGMLKDAEFIVSEMERSGVSPDECTYSLLI 368

Query: 185 KGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM 244
             Y  AG+ E +  +L  M    N+ PN   ++ ++ ++ +     +++ V+ +M  SG+
Sbjct: 369 DAYSNAGRWESARIVLKEM-EANNIMPNSYVFSRILASYRDRGEWQKSFQVLKEMKNSGV 427

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           +PD   YN +   + +    D A +   +M   G+QP+  T   +I  +CK    + A  
Sbjct: 428 RPDRHFYNVMIDTFGKFSCLDHAMDTFDKMLSEGIQPDTVTWNTLIDCHCKAELHERAEE 487

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               M E G  P +  FN++I  F E    D V  ++  M+   + P+V+TY+T+++ + 
Sbjct: 488 LFEEMMEKGFSPCVTTFNIMINSFGEQERWDDVKTLMGNMRSLGLLPNVVTYTTLIDIYG 547

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
            +G      E  +DM  AG+KP +  Y+ L   Y ++   E+A      M      P+++
Sbjct: 548 KSGRFSDAIECLEDMKSAGLKPSSTMYNALINAYAQKGLSEQAVNAFRLMRADSLKPSLL 607

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
              ++I+ +  D     A  V   M E+ + P++ T+ TLM       +  +   + + M
Sbjct: 608 ALNSLINAFGEDRRDAEAFSVLKYMKENDLKPDVVTYTTLMKALIRVDKFNKVPSVYEEM 667

Query: 485 KAFGVHPQKSTFLLLAEA 502
              G  P +    +L  A
Sbjct: 668 ILAGCTPDRKARAMLRSA 685


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 212/471 (45%), Gaps = 29/471 (6%)

Query: 78  LMNSLIE----RGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS--IHSIMS 131
           L NSL+      G    A  +FN +   G  P  V Y   + ++  Q+   +  +  ++ 
Sbjct: 343 LFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVE 402

Query: 132 QVEENGMDPDSIFFNAVINA-FSES----GNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
           +V E  M   S   N V  A FS      G  E+A     +M   G  P TSTY  +I  
Sbjct: 403 KVYEE-MLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITF 461

Query: 187 YGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
              A K E+S  L   M R G V P++ TY +L+ ++C    I +A +   +M + G  P
Sbjct: 462 LCQAKKVEKSFLLFQEMKRAG-VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSP 520

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR-F 305
           +VVTY  +  AY ++ +  QA ++   M      PN  T   +I G CK G+I++A   +
Sbjct: 521 NVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVY 580

Query: 306 ARTMKEYG---------------VHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN 350
            + +   G               + PN+V +  LI G  +        E+L  M      
Sbjct: 581 EKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCE 640

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEEL 410
           P+ I Y  +++ +   G +D  +E+F  M K G  P  H Y+ L     ++   + A ++
Sbjct: 641 PNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKV 700

Query: 411 LMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
           L  M+    +PNVV +T +I G    G +++A+ +   M E G SPN+ T+  L+ G  +
Sbjct: 701 LSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGK 760

Query: 471 ARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
             +   + ++ + M + G  P   T+ +L     A GL  EA  +L ++K+
Sbjct: 761 TGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKH 811



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 117/471 (24%), Positives = 219/471 (46%), Gaps = 27/471 (5%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           T++++ L+E     EA +  + +      P++VTY TLL+    +K+F     I++ +  
Sbjct: 275 TQMISGLMEASLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMT 334

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPE- 194
            G +P+   FN++++ +  +G+   A   F +M   G  P    YN  I    I G+ E 
Sbjct: 335 EGCNPNPSLFNSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIG--SICGQEEL 392

Query: 195 ESVKLLDLMSR-------EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPD 247
            + +LLDL+ +          V   + T N   R  C      +A+ ++ +M   G  PD
Sbjct: 393 PNAELLDLVEKVYEEMLAASCVLNKVNTAN-FSRCLCGVGKFEKAFQILKEMMRKGFVPD 451

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
             TY  + T   Q  + +++  +  EM+  GV P+  T  I+I  +CK G I++A  +  
Sbjct: 452 TSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFD 511

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M+  G  PN+V +  L+  +++        ++   M +    P+ +TYS +++    AG
Sbjct: 512 EMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAG 571

Query: 368 FMDKCKEIFDDM-GKAG---------------IKPDAHAYSILAKGYVREQEPEKAEELL 411
            + K  E+++ + G +G               I P+   Y  L  G  + Q+   A ELL
Sbjct: 572 EIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELL 631

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEA 471
             M+ +G  PN +++  +I G+C  G +D A EVF +M + G  P++ T+ +L+    + 
Sbjct: 632 DAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKD 691

Query: 472 RQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            +   A ++L  M     +P   T+  + +     G  ++A  +LS ++ K
Sbjct: 692 GRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEK 742



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 113/503 (22%), Positives = 211/503 (41%), Gaps = 59/503 (11%)

Query: 75  MTKLMNSLIER----GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT----------IQ 120
           + +L+N L+ R    G   EA      L + G++PS VTY  L+  L           +Q
Sbjct: 168 LRRLLNVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQ 227

Query: 121 KRFNSIHSIMSQ----------------------VEENGMDPDSIFFNAVINAFSESGNM 158
           K  ++    M +                      +E+   + D++    +I+   E+   
Sbjct: 228 KEMSASGFCMDRSTIGYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLF 287

Query: 159 EEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNV 218
            EAM    +M+ +   P   TY TL+ G+    +     +++++M  EG   PN   +N 
Sbjct: 288 NEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEG-CNPNPSLFNS 346

Query: 219 LVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE------ADQAEEVIV 272
           LV  +CN  +   A+ + ++M   G  P  V YN    +     E       D  E+V  
Sbjct: 347 LVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYE 406

Query: 273 EMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIM 332
           EM       N           C  GK ++A +  + M   G  P+   +  +I    +  
Sbjct: 407 EMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAK 466

Query: 333 DRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
             +    +   MK   VNPDV TY+ +++++  AG +++ +  FD+M   G  P+   Y+
Sbjct: 467 KVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYT 526

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
            L   Y++ ++  +A ++   M+++  +PN V ++ +I G C  G + +A EV++K+   
Sbjct: 527 ALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGT 586

Query: 453 G----------------VSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF 496
                            ++PN+ T+  L+ G  +A++   A E+L  M A G  P +  +
Sbjct: 587 SGNVESDFYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVY 646

Query: 497 LLLAEARRATGLTKEAKRILSKI 519
             L +     G    A+ +  ++
Sbjct: 647 DALIDGFCKIGKIDNAQEVFLRM 669



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/464 (25%), Positives = 205/464 (44%), Gaps = 56/464 (12%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V + T L++S  + G  ++A++ F+ +   G  P++VTYT LL A    K+    H I  
Sbjct: 487 VYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFH 546

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM-KESG---------------LTP 175
           ++ +    P+++ ++A+I+   ++G +++A + + K+   SG               + P
Sbjct: 547 RMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAP 606

Query: 176 TTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNV 235
              TY  LI G   A K  ++ +LLD M   G  +PN   Y+ L+  +C    I  A  V
Sbjct: 607 NVVTYGALIDGLCKAQKVSDAHELLDAMLAAG-CEPNQIVYDALIDGFCKIGKIDNAQEV 665

Query: 236 MHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
             +M   G  P V TY ++     ++G  D A +V+ EM ++   PN  T   +I G  K
Sbjct: 666 FLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSK 725

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVIT 355
            G+I++AL     M+E G  PN+V +  LI G  +    D   ++   M      P+ +T
Sbjct: 726 VGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVT 785

Query: 356 YSTIMNAWSTAGFMDKCKEIFDDM------------------------GKAGI------- 384
           Y  ++N    AG +D+   + D+M                           G+       
Sbjct: 786 YRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIASLGLLEEMESH 845

Query: 385 --KPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV---IFTTIISGWCSDGSM 439
              P A  Y +L   + +    E A EL   ++E     N+    ++ ++I   C    +
Sbjct: 846 ETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQV 905

Query: 440 DRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           + A  ++ +M   G+ P+L  F +L+ G  E  + W  +E LQ+
Sbjct: 906 EEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNK-W--DEALQL 946



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 98/403 (24%), Positives = 181/403 (44%), Gaps = 21/403 (5%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK ++A  I   ++  G  P   TYT ++  L   K+      +  +++  G++PD   +
Sbjct: 431 GKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPDVYTY 490

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             +I++F ++G +E+A   F +M+  G +P   TY  L+  Y    K ++ ++  D+  R
Sbjct: 491 TILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYL---KSKQLIQAHDIFHR 547

Query: 206 --EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG----------------MKPD 247
             +    PN  TY+ L+   C    I +A  V  K+  +                 + P+
Sbjct: 548 MVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPN 607

Query: 248 VVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           VVTY  +     +  +   A E++  M   G +PN      +I G+CK GKI  A     
Sbjct: 608 VVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFL 667

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M + G  P++  +  LI    +    D   +VL+ M     NP+V+TY+ +++  S  G
Sbjct: 668 RMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVG 727

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            ++K   +   M + G  P+   Y+ L  G  +  + + + +L   M   G  PN V + 
Sbjct: 728 EIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYR 787

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSE 470
            +I+  C+ G +D A  + D+M       +L+ +   + G+S+
Sbjct: 788 VLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSK 830



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/404 (22%), Positives = 186/404 (46%), Gaps = 28/404 (6%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLI------------EGGH----KPSLVTYTTLLAAL 117
           + + L++ L + G+ Q+A  ++  LI            EG       P++VTY  L+  L
Sbjct: 559 TYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAPNVVTYGALIDGL 618

Query: 118 TIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTT 177
              ++ +  H ++  +   G +P+ I ++A+I+ F + G ++ A + F +M + G  P+ 
Sbjct: 619 CKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSV 678

Query: 178 STYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMH 237
            TY +LI      G+ + ++K+L  M  + +  PN+ TY  ++        I +A N++ 
Sbjct: 679 HTYTSLIDRMFKDGRLDLAMKVLSEMLND-SCNPNVVTYTAMIDGLSKVGEIEKALNLLS 737

Query: 238 KMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEG 297
            M   G  P+VVTY  +     + G+AD + ++  +M   G  PN  T  ++I+  C  G
Sbjct: 738 LMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAG 797

Query: 298 KIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVI 354
            + EA      MK      +L  ++  ++GF +          L L++E   +   P   
Sbjct: 798 LLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKKFIAS-----LGLLEEMESHETVPIAP 852

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA---YSILAKGYVREQEPEKAEELL 411
            Y  +++++S AG ++   E+  ++ +     +  +   Y+ L +      + E+A  L 
Sbjct: 853 VYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEEAFTLY 912

Query: 412 MTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
             M   G  P++++F +++ G       D A+++    C  GV+
Sbjct: 913 TEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHEGVN 956



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 90/442 (20%), Positives = 172/442 (38%), Gaps = 59/442 (13%)

Query: 165 FWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWC 224
            W  ++ G + T + Y+ L +  G       + +LL  +  E + +   R  NVLVR  C
Sbjct: 122 LWAERQVGYSHTGACYDALAEILGFEDPARTAERLLREIG-EDDREVLRRLLNVLVRRCC 180

Query: 225 NEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGR 284
                 EA   + ++   G +P  VTYN +    A  G+ +    V  EM  +G   +  
Sbjct: 181 RHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRS 240

Query: 285 TCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM 344
           T G      CK G+  +AL     +++   + + V+   +I G   +M+    +E ++ +
Sbjct: 241 TIGYFAQALCKVGRWADALNM---LEKEDFNLDTVLCTQMISG---LMEASLFNEAMSFL 294

Query: 345 KEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVRE 401
              R N   P+V+TY T+++ +        CK I + M   G  P+   ++ L  GY   
Sbjct: 295 HRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNA 354

Query: 402 QEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD------------------------- 436
            +   A +L   M   G  P  V +   I   C                           
Sbjct: 355 GDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKVYEEMLAASCV 414

Query: 437 ----------------GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
                           G  ++A ++  +M   G  P+  T+  ++    +A++  ++  +
Sbjct: 415 LNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLL 474

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLE 540
            Q MK  GV+P   T+ +L ++    GL ++A+    ++++   +  +     +    L+
Sbjct: 475 FQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLK 534

Query: 541 R--------LYHKEATTASYPN 554
                    ++H+    A YPN
Sbjct: 535 SKQLIQAHDIFHRMVDAACYPN 556



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 55/253 (21%), Positives = 109/253 (43%), Gaps = 38/253 (15%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  +SC   V + T +++ L + G+ ++A  + + + E G  P++VTYT L+  L    +
Sbjct: 704 MLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGK 763

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEA---MD----TFW--------- 166
            ++   +  Q+   G  P+ + +  +IN    +G ++EA   +D    T W         
Sbjct: 764 ADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHC 823

Query: 167 -----------------KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKL---LDLMSRE 206
                            +M+     P    Y  LI  +  AG+ E +++L   L  +S  
Sbjct: 824 AVQGFSKKFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSS 883

Query: 207 GNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQ 266
            N+      Y  L++A C    + EA+ +  +M   G+ PD++ + ++     +  + D+
Sbjct: 884 LNMTST-GMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDE 942

Query: 267 AEEVIVEMEHNGV 279
           A ++     H GV
Sbjct: 943 ALQLCYGRCHEGV 955


>gi|32489921|emb|CAE05513.1| OSJNBa0038P21.6 [Oryza sativa Japonica Group]
          Length = 648

 Score =  176 bits (445), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/459 (24%), Positives = 208/459 (45%), Gaps = 28/459 (6%)

Query: 88  PQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNA 147
           P+ A A+F  L+  G  P + +Y TL+   + +   +  + +  ++ E  + PD + +N+
Sbjct: 45  PELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNS 104

Query: 148 VINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREG 207
           +I+   ++  M ++     +M ++G+ P   TYN+LI GY  AG  +ESV++   MS  G
Sbjct: 105 LIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSG 164

Query: 208 NVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQA 267
            + P +   N  + A C    I EA ++   M   G KP++++Y+T+   YA  G     
Sbjct: 165 LI-PCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANM 223

Query: 268 EEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKG 327
             ++  M   G+ PN R   I+I+ Y + G + +A+     M+  G+ P+ V F  +I  
Sbjct: 224 NSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISS 283

Query: 328 FVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPD 387
              I   D        M +  V P    Y  ++      G + K KE+  +M    I P 
Sbjct: 284 LCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPP 343

Query: 388 AHAY-SILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAI--- 443
              Y S +     +E    + ++++  M+++G  PNVV F +++ G+C  G+M+ A+   
Sbjct: 344 GVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYL 403

Query: 444 -----------------------EVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEI 480
                                  ++F +M E G + +++T+  ++ G         A  +
Sbjct: 404 MLWHQLALNRIVTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANML 463

Query: 481 LQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           L+ + A  V     TF ++  A    G  +EAK + + I
Sbjct: 464 LEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAI 502



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 119/514 (23%), Positives = 232/514 (45%), Gaps = 33/514 (6%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMS 131
           V S   L++   + G+  +A  +F  +IE    P +VTY +L+  L   K       ++ 
Sbjct: 64  VCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLE 123

Query: 132 QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAG 191
           Q+ + G+ P++  +N++I  +S +G  +E++  F +M  SGL P     N+ I       
Sbjct: 124 QMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHN 183

Query: 192 KPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY 251
           + +E+  + D M  +G  KPN+ +Y+ L+  +  E       ++++ M + G+ P+   +
Sbjct: 184 RIKEAKDIFDSMVLKGP-KPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFF 242

Query: 252 NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKE 311
           N +  AYA+ G  D+A  +  +M++ G+ P+  T   +IS  C+ G++ +AL     M +
Sbjct: 243 NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVD 302

Query: 312 YGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY-STIMNAWSTAGFMD 370
            GV P+  ++  LI+G     +     E+++ M    + P  + Y S+I+N     G + 
Sbjct: 303 IGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVA 362

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMT----------------- 413
           + K+I D M + G +P+   ++ L +GY      E+A   LM                  
Sbjct: 363 EGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQLALNRIVTYMARRT 422

Query: 414 ---------MIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETL 464
                    MIESG   ++  +  ++ G C +   D A  + +K+    V  ++ TF  +
Sbjct: 423 TAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIV 482

Query: 465 MWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
           +    +  +   A+E+   +  +G+ P   T+ L+          +EA  +   ++   R
Sbjct: 483 ISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGR 542

Query: 525 TNEMEAEEDIPVESLERLYHKEATTASYPNLLQI 558
                A +   +  + R+  K+A  A   N L I
Sbjct: 543 -----APDSRLLNHIVRMLLKKAEVAKASNYLSI 571



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 184/381 (48%), Gaps = 3/381 (0%)

Query: 138 MDPDSIFFNAVINAF-SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEES 196
           M P S    ++I+   +E    E A+  F ++  +GL P   +YNTLI G+   G+ +++
Sbjct: 24  MLPPSTPTTSLIDVLPAECTGPELALAVFGRLLRTGLGPDVCSYNTLIDGFSKEGEVDKA 83

Query: 197 VKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIAT 256
            +L   M  E +V P++ TYN L+   C  K + ++  V+ +M  +G++P+  TYN++  
Sbjct: 84  YELFYKMI-EQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIY 142

Query: 257 AYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHP 316
            Y+  G   ++  V  EM  +G+ P    C   I   C+  +IKEA     +M   G  P
Sbjct: 143 GYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKP 202

Query: 317 NLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIF 376
           N++ ++ L+ G+        ++ ++ LM    + P+   ++ ++NA++  G MDK   IF
Sbjct: 203 NIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIF 262

Query: 377 DDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD 436
           +DM   G+ PD   ++ +     R    + A      M++ G  P+  ++  +I G C+ 
Sbjct: 263 EDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNH 322

Query: 437 GSMDRAIEVFDKMCEHGV-SPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
           G + +A E+  +M    +  P +K F +++    +  +    ++I+ +M   G  P   T
Sbjct: 323 GELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVT 382

Query: 496 FLLLAEARRATGLTKEAKRIL 516
           F  L E     G  +EA   L
Sbjct: 383 FNSLMEGYCLVGNMEEALHYL 403



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 100/422 (23%), Positives = 203/422 (48%), Gaps = 40/422 (9%)

Query: 48  NSKPTDSQPQTHCSFCMNKESCRTVRSMTK------------LMNSLIERGKPQEAQAIF 95
           N+K  +S    + +  M KES R  + M+              +++L    + +EA+ IF
Sbjct: 133 NNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIF 192

Query: 96  NNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSES 155
           ++++  G KP++++Y+TLL     +  F +++S+++ +   G+ P+  FFN +INA++  
Sbjct: 193 DSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARC 252

Query: 156 GNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRT 215
           G M++AM  F  M+  G+ P T T+ T+I      G+ ++++   + M   G V P+   
Sbjct: 253 GMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG-VPPSEAV 311

Query: 216 YNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTY-NTIATAYAQNGEADQAEEVIVEM 274
           Y  L++  CN   + +A  ++ +M    + P  V Y ++I     + G   + ++++  M
Sbjct: 312 YRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLM 371

Query: 275 EHNGVQPNGRTCGIIISGYCKEGKIKEALRFA-----------------RT--------- 308
              G +PN  T   ++ GYC  G ++EAL +                  RT         
Sbjct: 372 VQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLMLWHQLALNRIVTYMARRTTAAKKMFHE 431

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGF 368
           M E G   ++  + +++ G       D  + +L  +    V  D+IT++ +++A    G 
Sbjct: 432 MIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGR 491

Query: 369 MDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTT 428
             + KE+F  +   G+ P  H Y+++    ++E+  E+A+ L +++ +SG  P+  +   
Sbjct: 492 RQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNH 551

Query: 429 II 430
           I+
Sbjct: 552 IV 553



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 105/218 (48%), Gaps = 1/218 (0%)

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
           F R ++  G+ P++  +N LI GF +  + D   E+   M E  V+PDV+TY+++++   
Sbjct: 52  FGRLLRT-GLGPDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLC 110

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
               M K + + + M  AGI+P+   Y+ L  GY      +++  +   M  SG  P VV
Sbjct: 111 KTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVV 170

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
              + I   C    +  A ++FD M   G  PN+ ++ TL+ GY+          ++ +M
Sbjct: 171 NCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLM 230

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            + G+ P    F +L  A    G+  +A  I   ++NK
Sbjct: 231 VSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNK 268



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/317 (21%), Positives = 144/317 (45%), Gaps = 26/317 (8%)

Query: 74  SMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQV 133
           +   +++SL   G+  +A   FN++++ G  PS   Y  L+              ++S++
Sbjct: 276 TFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKELISEM 335

Query: 134 EENGMDPDSI-FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
               + P  + +F+++IN   + G + E  D    M ++G  P   T+N+L++GY + G 
Sbjct: 336 MNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGN 395

Query: 193 PEESVKLLDL------------MSR-------------EGNVKPNLRTYNVLVRAWCNEK 227
            EE++  L L            M+R             E     +++TY V++   C   
Sbjct: 396 MEEALHYLMLWHQLALNRIVTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNN 455

Query: 228 NITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCG 287
              EA  ++ K+ A  +K D++T+N + +A  + G   +A+E+   +   G+ P   T  
Sbjct: 456 CTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYN 515

Query: 288 IIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF 347
           ++IS   KE   +EA     ++++ G  P+  + N +++  ++  +       L+++ E 
Sbjct: 516 LMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDEN 575

Query: 348 RVNPDVITYSTIMNAWS 364
            +  +  T S + + +S
Sbjct: 576 NLTLEASTISLLASLFS 592



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 51/256 (19%), Positives = 107/256 (41%), Gaps = 27/256 (10%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTI------------ 119
           V+  + ++N+L + G+  E + I + +++ G +P++VT+ +L+    +            
Sbjct: 345 VKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEALHYLM 404

Query: 120 ---QKRFNSIHSIMS-----------QVEENGMDPDSIFFNAVINAFSESGNMEEAMDTF 165
              Q   N I + M+           ++ E+G       +  V+     +   +EA    
Sbjct: 405 LWHQLALNRIVTYMARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLL 464

Query: 166 WKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCN 225
            K+    +     T+N +I      G+ +E+ +L   +S  G V P + TYN+++     
Sbjct: 465 EKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLV-PTVHTYNLMISNLIK 523

Query: 226 EKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRT 285
           E++  EA N+   +  SG  PD    N I     +  E  +A   +  ++ N +     T
Sbjct: 524 EESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEAST 583

Query: 286 CGIIISGYCKEGKIKE 301
             ++ S + +E   +E
Sbjct: 584 ISLLASLFSREDTQRE 599


>gi|449461223|ref|XP_004148341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
 gi|449507064|ref|XP_004162923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g18940-like [Cucumis sativus]
          Length = 844

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 112/478 (23%), Positives = 218/478 (45%), Gaps = 34/478 (7%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+    + G   EA  I   + +       VTY  L+AA      +    +++  +   G
Sbjct: 344 LLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKG 403

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + P+++ +  VINA+  +G   +A+  F +MK+SG  P   TYN+++   G   + EE +
Sbjct: 404 VMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMI 463

Query: 198 KLLDLMSREG----------------------------------NVKPNLRTYNVLVRAW 223
           K+L  M   G                                    +P   T+N L+ A+
Sbjct: 464 KILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAY 523

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
               +  +A  +  +M  +G  P   TYN +  A A+ G+   AE V+++M + G +PN 
Sbjct: 524 GRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNE 583

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            +  +++  Y K G ++   R  + + +  + P+ V+   LI    +     G++     
Sbjct: 584 TSFSLMLHCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEE 643

Query: 344 MKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQE 403
           + +    PD++ ++++++ ++     ++ +++ D + ++G++PD   Y+ L   Y R  E
Sbjct: 644 LMKNGYKPDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRGE 703

Query: 404 PEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFET 463
             KAEE+L  +I+SG  P++V + TII G+C  G M  AI V  +M   G+ P + T+ T
Sbjct: 704 CWKAEEILKGLIKSGESPDLVSYNTIIKGFCRQGLMQEAIRVMSEMTTRGICPCIFTYNT 763

Query: 464 LMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            + GY+        +E++  M      P + T+ ++ +        ++A   +  IKN
Sbjct: 764 FVSGYAGRGMFAEVDEVISYMIQKNCKPNELTYKIIVDGYCKARKYQDAMDFIFGIKN 821



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 207/437 (47%), Gaps = 1/437 (0%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           G   EA+  F  L   G++P  VTY  LL        ++   +I+ ++E+N    DS+ +
Sbjct: 317 GLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTY 376

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
           N ++ A+  +G  EE       M   G+ P   TY T+I  YG AGK  ++++L + M +
Sbjct: 377 NELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKK 436

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEAD 265
            G V PN+ TYN ++     +    E   ++  M  +G  P+ +T+NT+       G+  
Sbjct: 437 SGCV-PNVCTYNSILALLGKKSRSEEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHK 495

Query: 266 QAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLI 325
               V  EM++ G +P   T   +IS Y + G   +A +    M + G  P    +N L+
Sbjct: 496 FVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALL 555

Query: 326 KGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIK 385
                  D    + VL  M+     P+  ++S +++ ++  G +   + I  D+    I 
Sbjct: 556 NALARRGDWKAAESVLLDMRNKGFKPNETSFSLMLHCYAKGGNVRGLERIGKDIYDGQIF 615

Query: 386 PDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEV 445
           P       L     + +     E     ++++G+ P++VIF +++S +  +   +RA ++
Sbjct: 616 PSWVLLRTLILANFKCRAVRGMERAFEELMKNGYKPDMVIFNSMLSIFAKNNMYERAQKM 675

Query: 446 FDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRA 505
            D + E G+ P+L T+ +LM  Y+   + W+AEEIL+ +   G  P   ++  + +    
Sbjct: 676 LDLIRESGLQPDLVTYNSLMNMYARRGECWKAEEILKGLIKSGESPDLVSYNTIIKGFCR 735

Query: 506 TGLTKEAKRILSKIKNK 522
            GL +EA R++S++  +
Sbjct: 736 QGLMQEAIRVMSEMTTR 752



 Score =  169 bits (427), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 120/472 (25%), Positives = 224/472 (47%), Gaps = 39/472 (8%)

Query: 72  VRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAAL-TIQKRFNSIHSIM 130
           VR+ T ++++    GK ++A A+F  + + G  PSLVTY  +L     + + ++ I  ++
Sbjct: 232 VRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKMGRSWDKILDLL 291

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++   G+  D    + VI+A    G + EA + F ++K SG  P T TYN L++ +G A
Sbjct: 292 DEMRNEGLQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTVTYNALLQVFGKA 351

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   E++ +L  M  + N   +  TYN LV A+       E   V+  M   G+ P+ VT
Sbjct: 352 GIYSEALNILKEM-EDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTMTRKGVMPNAVT 410

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           Y T+  AY + G+  +A ++  +M+ +G  PN  T   I++   K+ + +E ++    M+
Sbjct: 411 YTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRSEEMIKILSDMR 470

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  PN + +N L+    +      V+ V   MK     P   T++T+++A+   G   
Sbjct: 471 INGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTLISAYGRCGSEL 530

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTII 430
              +++D+M KAG  P A  Y+ L     R  + + AE +L+ M   GF PN   F+ ++
Sbjct: 531 DAAKMYDEMMKAGFTPCATTYNALLNALARRGDWKAAESVLLDMRNKGFKPNETSFSLML 590

Query: 431 SGWCSDGSMD-------------------------------RAI----EVFDKMCEHGVS 455
             +   G++                                RA+      F+++ ++G  
Sbjct: 591 HCYAKGGNVRGLERIGKDIYDGQIFPSWVLLRTLILANFKCRAVRGMERAFEELMKNGYK 650

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTF--LLLAEARRA 505
           P++  F +++  +++     RA+++L +++  G+ P   T+  L+   ARR 
Sbjct: 651 PDMVIFNSMLSIFAKNNMYERAQKMLDLIRESGLQPDLVTYNSLMNMYARRG 702



 Score =  138 bits (348), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 205/447 (45%), Gaps = 8/447 (1%)

Query: 75  MTKLMNSLIERGKPQEAQAIF----NNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +  L+ +L   GK + A  +F    +N + G  K        ++  L  + +++    ++
Sbjct: 161 IVSLLKALDVLGKSERAILLFEWVVSNSVSGDVKLDSKAVELMIRILGRESKYSIALKLL 220

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++  +    D      +++A+S +G  ++A+  F +MK+ GL+P+  TYN ++  YG  
Sbjct: 221 DKIPIDKYSLDVRACTTILHAYSRNGKYKQAIAMFERMKDCGLSPSLVTYNVMLDVYGKM 280

Query: 191 GKP-EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
           G+  ++ + LLD M  EG ++ +  T + ++ A   E  I EA     ++ +SG +P  V
Sbjct: 281 GRSWDKILDLLDEMRNEG-LQFDEFTCSTVISACGREGLINEAKEFFVELKSSGYEPGTV 339

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TYN +   + + G   +A  ++ EME N    +  T   +++ Y + G  +E      TM
Sbjct: 340 TYNALLQVFGKAGIYSEALNILKEMEDNNCTLDSVTYNELVAAYVRAGFYEEGATVIDTM 399

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
              GV PN V +  +I  +          ++   MK+    P+V TY++I+         
Sbjct: 400 TRKGVMPNAVTYTTVINAYGRAGKEVKALQLFNQMKKSGCVPNVCTYNSILALLGKKSRS 459

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           ++  +I  DM   G  P+   ++ L      + + +    +   M   GF P    F T+
Sbjct: 460 EEMIKILSDMRINGCPPNRITWNTLLAMCGDKGKHKFVNHVFREMKNCGFEPGKDTFNTL 519

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR-AEEILQIMKAFG 488
           IS +   GS   A +++D+M + G +P   T+  L+   +  R  W+ AE +L  M+  G
Sbjct: 520 ISAYGRCGSELDAAKMYDEMMKAGFTPCATTYNALLNALAR-RGDWKAAESVLLDMRNKG 578

Query: 489 VHPQKSTFLLLAEARRATGLTKEAKRI 515
             P +++F L+       G  +  +RI
Sbjct: 579 FKPNETSFSLMLHCYAKGGNVRGLERI 605


>gi|115461420|ref|NP_001054310.1| Os04g0684500 [Oryza sativa Japonica Group]
 gi|113565881|dbj|BAF16224.1| Os04g0684500 [Oryza sativa Japonica Group]
          Length = 901

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/424 (25%), Positives = 204/424 (48%), Gaps = 1/424 (0%)

Query: 76  TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEE 135
           + ++++  + G  + A+ +   + E G    +  Y +++   TI +  N    +  +++E
Sbjct: 373 SNIIHAHCQSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKE 432

Query: 136 NGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEE 195
            G  P  I +  ++N + + G + +A+    +M+  G+     TY+ LI G+        
Sbjct: 433 CGFKPSIISYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFAN 492

Query: 196 SVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIA 255
           +  + + M R G ++P+   YN+L+ A+C   N+  A  ++ KM    M+P    +  I 
Sbjct: 493 AFAIFEEMLRSG-LQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPII 551

Query: 256 TAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVH 315
             YA  G+   A + +  M  +G  P   T   +I G  ++ K++ A+     M   G+ 
Sbjct: 552 EGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGIT 611

Query: 316 PNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEI 375
           PN   + ++++G+    D     E    +KE  +  DV  Y T++ A   +G M     +
Sbjct: 612 PNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAV 671

Query: 376 FDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCS 435
             +M    I  +   Y+IL  G+ R  +  +AE+L+  M E G  PN+  +T+ I+  C 
Sbjct: 672 TREMSFQKIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYTSYINACCK 731

Query: 436 DGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKST 495
            G M RA +V ++M + G+ PN+KT+ TL+ G++    P RA +  + MK  G+ P +++
Sbjct: 732 AGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEAS 791

Query: 496 FLLL 499
           +  L
Sbjct: 792 YHCL 795



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/426 (23%), Positives = 195/426 (45%), Gaps = 16/426 (3%)

Query: 67  ESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSI 126
           E+CR  R + +         +P   QA+ +   E   KPS   +  ++     +   +  
Sbjct: 233 EACREFRRVVE--------SRPDNWQAVVSAF-ERIPKPSRREFGLMIVYYAKRGDKHHA 283

Query: 127 HSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKG 186
            +    +   G++P++  F ++++A++ + +M  A+    +MK  GL  T  TY+ LI G
Sbjct: 284 RATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALSCVEEMKSEGLELTIVTYSILISG 343

Query: 187 YGIAGKPEESVKLLDLMSREGNVKP---NLRTYNVLVRAWCNEKNITEAWNVMHKMAASG 243
           +      + +    D + +E   K    N   Y+ ++ A C   N+  A  ++ +M   G
Sbjct: 344 FAKINDSQSA----DNLFKEAKTKLSSLNGIIYSNIIHAHCQSGNMERAEELVREMEEDG 399

Query: 244 MKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
           +   +  Y+++   Y      ++   V   ++  G +P+  + G +++ Y K GK+ +AL
Sbjct: 400 IDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSIISYGCLLNLYVKIGKVAKAL 459

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
             ++ M+  G+  N   +++LI GF+ + D      +   M    + PD   Y+ ++ A+
Sbjct: 460 SISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEMLRSGLQPDRAIYNLLIEAF 519

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
              G MD+   I + M K  ++P   A+  + +GY    + + A + L  M  SG  P V
Sbjct: 520 CKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTV 579

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQI 483
           + +  +I G      + RA+ V DKM   G++PN  T+  +M GY+ +    +A E    
Sbjct: 580 MTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTK 639

Query: 484 MKAFGV 489
           +K  G+
Sbjct: 640 IKESGL 645



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 82/345 (23%), Positives = 162/345 (46%), Gaps = 1/345 (0%)

Query: 175 PTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWN 234
           P+   +  +I  Y   G    +    + M   G ++PN   +  LV A+   +++  A +
Sbjct: 262 PSRREFGLMIVYYAKRGDKHHARATFENMRARG-IEPNAFVFTSLVHAYAVARDMRGALS 320

Query: 235 VMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYC 294
            + +M + G++  +VTY+ + + +A+  ++  A+ +  E +      NG     II  +C
Sbjct: 321 CVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHC 380

Query: 295 KEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVI 354
           + G ++ A    R M+E G+   + +++ ++ G+  I + +    V   +KE    P +I
Sbjct: 381 QSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSII 440

Query: 355 TYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTM 414
           +Y  ++N +   G + K   I  +M   GIK +   YS+L  G++   +   A  +   M
Sbjct: 441 SYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM 500

Query: 415 IESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQP 474
           + SG  P+  I+  +I  +C  G+MDRAI + +KM +  + P+ + F  ++ GY+ A   
Sbjct: 501 LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQKERMQPSNRAFRPIIEGYAVAGDM 560

Query: 475 WRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             A + L +M+  G  P   T+  L          + A  +L K+
Sbjct: 561 KSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKM 605



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/295 (23%), Positives = 144/295 (48%), Gaps = 5/295 (1%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           R+   ++      G  + A    + +   G  P+++TY  L+  L  + +     S++ +
Sbjct: 545 RAFRPIIEGYAVAGDMKSALDTLDLMRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDK 604

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           +   G+ P+   +  ++  ++ SG++ +A + F K+KESGL      Y TL++    +G+
Sbjct: 605 MSIAGITPNEHTYTIIMRGYAASGDIGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGR 664

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYN 252
            + ++ +   MS +  +  N   YN+L+  W    ++ EA ++M +M   G+ P++ TY 
Sbjct: 665 MQSALAVTREMSFQ-KIPRNTFIYNILIDGWARRGDVWEAEDLMKQMKEDGVPPNIHTYT 723

Query: 253 TIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEY 312
           +   A  + G+  +AE+VI EM   G++PN +T   +I G+ +      AL+    MK  
Sbjct: 724 SYINACCKAGDMQRAEKVIEEMVDVGLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLA 783

Query: 313 GVHPNLVIFNLLIKGFVE---IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
           G+ P+   ++ L+   +    +M+      ++++ +E   N   +   T ++ WS
Sbjct: 784 GLKPDEASYHCLVTSLLSRATVMEGSTYTGIISVCREMSENDLTVDLRTAVH-WS 837



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 71/280 (25%), Positives = 126/280 (45%), Gaps = 1/280 (0%)

Query: 245 KPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALR 304
           KP    +  +   YA+ G+   A      M   G++PN      ++  Y     ++ AL 
Sbjct: 261 KPSRREFGLMIVYYAKRGDKHHARATFENMRARGIEPNAFVFTSLVHAYAVARDMRGALS 320

Query: 305 FARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWS 364
               MK  G+   +V +++LI GF +I D    D +    K    + + I YS I++A  
Sbjct: 321 CVEEMKSEGLELTIVTYSILISGFAKINDSQSADNLFKEAKTKLSSLNGIIYSNIIHAHC 380

Query: 365 TAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVV 424
            +G M++ +E+  +M + GI      Y  +  GY   Q   K   +   + E GF P+++
Sbjct: 381 QSGNMERAEELVREMEEDGIDAPIDVYHSMMHGYTIIQNENKCLVVFERLKECGFKPSII 440

Query: 425 IFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIM 484
            +  +++ +   G + +A+ +  +M   G+  N KT+  L+ G+        A  I + M
Sbjct: 441 SYGCLLNLYVKIGKVAKALSISKEMESCGIKHNNKTYSMLINGFIHLHDFANAFAIFEEM 500

Query: 485 KAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNKER 524
              G+ P ++ + LL EA    G    A  IL K++ KER
Sbjct: 501 LRSGLQPDRAIYNLLIEAFCKMGNMDRAICILEKMQ-KER 539



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 112/240 (46%), Gaps = 2/240 (0%)

Query: 64  MNKESC-RTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M +  C  TV +   L++ L+ + K Q A ++ + +   G  P+  TYT ++        
Sbjct: 570 MRRSGCVPTVMTYNALIHGLVRKHKVQRAVSVLDKMSIAGITPNEHTYTIIMRGYAASGD 629

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNT 182
                   ++++E+G+  D   +  ++ A  +SG M+ A+    +M    +   T  YN 
Sbjct: 630 IGKAFEYFTKIKESGLKLDVYIYETLLRACCKSGRMQSALAVTREMSFQKIPRNTFIYNI 689

Query: 183 LIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAAS 242
           LI G+   G   E+  L+  M  +G V PN+ TY   + A C   ++  A  V+ +M   
Sbjct: 690 LIDGWARRGDVWEAEDLMKQMKEDG-VPPNIHTYTSYINACCKAGDMQRAEKVIEEMVDV 748

Query: 243 GMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEA 302
           G+KP+V TY T+   +A+    D+A +   EM+  G++P+  +   +++       + E 
Sbjct: 749 GLKPNVKTYTTLIKGWARVSLPDRALKCFEEMKLAGLKPDEASYHCLVTSLLSRATVMEG 808


>gi|356536611|ref|XP_003536830.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 578

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/519 (24%), Positives = 220/519 (42%), Gaps = 96/519 (18%)

Query: 90  EAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVI 149
           +A A+F+ +++    PS+V +T +L  +   + + +   + + +E  G+ P ++ FN +I
Sbjct: 37  DAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFTVTFNILI 96

Query: 150 NAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI-------------------- 189
           N F   G M+ A     K+ + G  P   T+ TL+KG+ +                    
Sbjct: 97  NCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVARRIR 156

Query: 190 -----------------AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEA 232
                             GKP  +V+LL  M     VKPNL  YN +V   C + NI EA
Sbjct: 157 FDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLCKDGNINEA 216

Query: 233 WNVMHKMAASGMKPDVVTY----------------------------------------- 251
             +  KM   G+ PD+ TY                                         
Sbjct: 217 RVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEARELFNVMIE 276

Query: 252 ----------NTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKE 301
                     N +   Y  N +  +A ++   M   G QP+  T  I++ GYC   K+ E
Sbjct: 277 RGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGYCLIDKVDE 336

Query: 302 ALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYST 358
           A      M E G+ P++  +N+LIKG+ +    + V E + L+++  +    P++ITY++
Sbjct: 337 ARNLFHGMIERGLVPDVWSYNILIKGYCKF---ERVGEAMNLLEDMFLKNLVPNIITYNS 393

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAG-IKPDAHAYSILAKGYVREQEPEKAEELLMTMI-E 416
           +++    +G +    ++ D+M       PD   Y+IL +   R +  EKA      +I E
Sbjct: 394 VVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFKHLIFE 453

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWR 476
             F PNV  +  +ISG C +  +D AI +F+ MC   + P++ T+  L+      +Q  +
Sbjct: 454 RSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVPDIVTYNILLDALFNGQQLDK 513

Query: 477 AEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           A  +L  +   G+ P   T+ +L       G  K A++I
Sbjct: 514 AIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKI 552



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 155/332 (46%), Gaps = 11/332 (3%)

Query: 73  RSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQ 132
           + +T L+N      K  EA+ +FN +IE G +  ++ Y  L+    +  +      +   
Sbjct: 249 KEVTSLLNGFCLNNKVDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHM 308

Query: 133 VEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGK 192
           + E G  PD+I +  +++ +     ++EA + F  M E GL P   +YN LIKGY    +
Sbjct: 309 MVERGEQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFER 368

Query: 193 PEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGM-KPDVVTY 251
             E++ LL+ M  + N+ PN+ TYN +V   C    I +AW ++ +M       PDV TY
Sbjct: 369 VGEAMNLLEDMFLK-NLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTY 427

Query: 252 NTIATAYAQNGEADQAEEVIVEMEH----NGVQPNGRTCGIIISGYCKEGKIKEALRFAR 307
           N +  +  +    +  E+ I   +H        PN  +  I+ISG CK  ++ EA+    
Sbjct: 428 NILLESLCR---IECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFN 484

Query: 308 TMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAG 367
            M    + P++V +N+L+         D    +L  + +  ++P++ TY+ ++N     G
Sbjct: 485 HMCFKNLVPDIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGG 544

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSI--LAKG 397
                ++I   +   G  PD   Y I  L KG
Sbjct: 545 RPKTAQKISLYLSIRGYHPDVKTYIINELCKG 576



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 202/423 (47%), Gaps = 28/423 (6%)

Query: 157 NMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTY 216
           ++++A+  F +M +    P+   +  ++           ++ L  LM  +G V P   T+
Sbjct: 34  SIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKG-VVPFTVTF 92

Query: 217 NVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEH 276
           N+L+  +C+   +  A++VM K+   G +P+VVT+ T+   +  N +   A  +  EM  
Sbjct: 93  NILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCVNDKMLDALYIYDEMVA 152

Query: 277 NGVQPNGRTCGIIISGYCKE--GKIKEALRFARTMKEYG-VHPNLVIFNLLIKGFVEIMD 333
             ++ +    G +I+G CK   GK + A++  + M+E   V PNL+++N ++ G      
Sbjct: 153 RRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHGLC---- 208

Query: 334 RDG-VDEVLALMKEFRVN---PDVITYSTIMNAWSTAG----------------FMDKCK 373
           +DG ++E   L  +  V    PD+ TYS+++     AG                 +D+ +
Sbjct: 209 KDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDEAR 268

Query: 374 EIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           E+F+ M + G + D   Y+IL  GY    +  +A +L   M+E G  P+ + +T ++ G+
Sbjct: 269 ELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMHGY 328

Query: 434 CSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQK 493
           C    +D A  +F  M E G+ P++ ++  L+ GY +  +   A  +L+ M    + P  
Sbjct: 329 CLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAMNLLEDMFLKNLVPNI 388

Query: 494 STFLLLAEARRATGLTKEAKRILSKIKNKERTNEMEAEEDIPVESLERLYHKEATTASYP 553
            T+  + +    +G   +A +++ ++    +        +I +ESL R+   E   A + 
Sbjct: 389 ITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLESLCRIECVEKAIAFFK 448

Query: 554 NLL 556
           +L+
Sbjct: 449 HLI 451



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 142/323 (43%), Gaps = 61/323 (18%)

Query: 62  FCMNKESCRTVRSMTKLMNSLIERG-------------------KPQEAQAIFNNLIEGG 102
           FC+N +    V    +L N +IERG                   K  EA+ +F+ ++E G
Sbjct: 258 FCLNNK----VDEARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERG 313

Query: 103 HKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM 162
            +P  +TYT L+    +  + +   ++   + E G+ PD   +N +I  + +   + EAM
Sbjct: 314 EQPDTITYTILMHGYCLIDKVDEARNLFHGMIERGLVPDVWSYNILIKGYCKFERVGEAM 373

Query: 163 DTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR----------------- 205
           +    M    L P   TYN+++ G   +G   ++ KL+D M                   
Sbjct: 374 NLLEDMFLKNLVPNIITYNSVVDGLCKSGGILDAWKLVDEMHYCCQPPPDVTTYNILLES 433

Query: 206 -------------------EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP 246
                              E +  PN+ +YN+L+   C  + + EA N+ + M    + P
Sbjct: 434 LCRIECVEKAIAFFKHLIFERSFAPNVWSYNILISGCCKNRRLDEAINLFNHMCFKNLVP 493

Query: 247 DVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFA 306
           D+VTYN +  A     + D+A  ++V++   G+ PN RT  I+I+G  K G+ K A + +
Sbjct: 494 DIVTYNILLDALFNGQQLDKAIALLVQIVDQGISPNLRTYNILINGLHKGGRPKTAQKIS 553

Query: 307 RTMKEYGVHPNL--VIFNLLIKG 327
             +   G HP++   I N L KG
Sbjct: 554 LYLSIRGYHPDVKTYIINELCKG 576



 Score = 95.5 bits (236), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 133/315 (42%), Gaps = 25/315 (7%)

Query: 224 CNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNG 283
           C   +I +A  + H+M      P +V +  I    A+      A ++   ME+ GV P  
Sbjct: 30  CKFDSIDDAVALFHRMVDMHPLPSIVEFTKILGTIAKMRYYATAIDLYTLMEYKGVVPFT 89

Query: 284 RTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLAL 343
            T  I+I+ +C  G++  A      + ++G  PN+V F  L+KGF      D + + L +
Sbjct: 90  VTFNILINCFCHMGQMDFAFSVMGKILKWGCRPNVVTFTTLMKGFCV---NDKMLDALYI 146

Query: 344 MKEF---RVNPDVITYSTIMNAW--STAGFMDKCKEIFDDM-GKAGIKPDAHAYSILAKG 397
             E    R+  D + Y T++N    S  G      ++   M  +  +KP+   Y+ +  G
Sbjct: 147 YDEMVARRIRFDDVLYGTLINGLCKSKIGKPRAAVQLLQKMEERQLVKPNLIMYNTVVHG 206

Query: 398 YVREQEPEKAEELLMTMIESGFHPNVVIF----------------TTIISGWCSDGSMDR 441
             ++    +A  L   MI  G  P++  +                T++++G+C +  +D 
Sbjct: 207 LCKDGNINEARVLCSKMIVQGIFPDIFTYSSLIYGLCRAGQRKEVTSLLNGFCLNNKVDE 266

Query: 442 AIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAE 501
           A E+F+ M E G   ++  +  LM GY    +   A ++  +M   G  P   T+ +L  
Sbjct: 267 ARELFNVMIERGEQHDIINYNILMNGYCLNNKVGEARKLFHMMVERGEQPDTITYTILMH 326

Query: 502 ARRATGLTKEAKRIL 516
                    EA+ + 
Sbjct: 327 GYCLIDKVDEARNLF 341


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/463 (23%), Positives = 214/463 (46%), Gaps = 36/463 (7%)

Query: 95  FNNLIEGGHKPSLVTYTTLLAALTI--QKRFNSIHSIMSQVEENGMDPDSIFFNAVINAF 152
           F+ ++     PS+V +  +L ++       + +  S+  Q+E  G+ P  + FN ++N +
Sbjct: 45  FHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCY 104

Query: 153 SESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLD----------- 201
              G M  A   F K+ + G  PTT T+NTLI G  + GK +E++   D           
Sbjct: 105 CHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQ 164

Query: 202 ----------------------LMSREGN-VKPNLRTYNVLVRAWCNEKNITEAWNVMHK 238
                                 L   EG  V  ++  YN+++ + C +K +++A+ +  +
Sbjct: 165 VSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSE 224

Query: 239 MAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGK 298
           M    + PDVVT+N++   +   G+  +A  +  EM    + P+  T  I++   CK+G 
Sbjct: 225 MITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGN 284

Query: 299 IKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYST 358
           I  A      M + GV P++V ++ L+ G+  + + +    V + M    V P   +Y+ 
Sbjct: 285 ITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNI 344

Query: 359 IMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESG 418
           ++N       +D+   +F +M   GI PD   Y+ L  G  +      A +L+  M  +G
Sbjct: 345 MINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNG 404

Query: 419 FHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAE 478
              +++ + ++I   C +  +D+AI +  K+ + G+ P++ T+  L+ G  +  +   A+
Sbjct: 405 IPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQ 464

Query: 479 EILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
           ++ Q +   G      T+ ++       GL  EA+ +LSK++N
Sbjct: 465 DVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMEN 507



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/452 (23%), Positives = 206/452 (45%), Gaps = 7/452 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T+ +   L+N     G+   A +IF  +++ G+ P+ +T+ TL+  + +  +        
Sbjct: 93  TIVTFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFH 152

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
             V   G   D + +  +IN   + G    A+    K++   +      YN +I      
Sbjct: 153 DHVIALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKD 212

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
               ++ +L   M  +  + P++ T+N L+  +C    + EA+ + H+M    + PDV T
Sbjct: 213 KAVSDAYQLYSEMITK-RISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYT 271

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           ++ +  A  ++G   +A+ ++  M   GV P+  T   ++ GYC   ++ +A     TM 
Sbjct: 272 FSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMS 331

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEF---RVNPDVITYSTIMNAWSTAG 367
             GV P+   +N++I G  +I     VDE L+L KE     + PD +TY+++++     G
Sbjct: 332 RLGVAPHAHSYNIMINGLGKI---KMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLG 388

Query: 368 FMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFT 427
            +    ++ D+M   GI  D   Y+ L     +    +KA  L+  + + G  P++  + 
Sbjct: 389 RISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYN 448

Query: 428 TIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAF 487
            +I G C  G +  A +VF  +   G S N  T+  ++ G  +      AE +L  M+  
Sbjct: 449 ILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENN 508

Query: 488 GVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
           G+ P   T+  +  A       ++A+++L ++
Sbjct: 509 GIIPDAVTYETIIRALFRKDENEKAEKLLREM 540



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 102/422 (24%), Positives = 195/422 (46%), Gaps = 42/422 (9%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  +   L+N +   GK +EA    +++I  G     V+Y TL+  L       +   ++
Sbjct: 128 TTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGLCKIGETRAALQML 187

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++E   ++ D + +N +IN+  +   + +A   + +M    ++P   T+N+LI G+ + 
Sbjct: 188 KKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVV 247

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G+ +E+  L   M  + N+ P++ T+++LV A C + NIT A N++  M   G+ PDVVT
Sbjct: 248 GQLKEAFGLFHEMVLK-NINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVT 306

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGI---------------------- 288
           Y+++   Y    E ++A+ V   M   GV P+  +  I                      
Sbjct: 307 YSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMC 366

Query: 289 -------------IISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRD 335
                        +I G CK G+I  A +    M   G+  +++ +N LI    +     
Sbjct: 367 CKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCK---NH 423

Query: 336 GVDEVLALMKEFR---VNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYS 392
            +D+ +AL+K+ +   + P + TY+ +++     G +   +++F D+   G   +A  Y+
Sbjct: 424 HIDKAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYN 483

Query: 393 ILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEH 452
           I+  G  +E    +AE LL  M  +G  P+ V + TII         ++A ++  +M   
Sbjct: 484 IMINGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIR 543

Query: 453 GV 454
           G+
Sbjct: 544 GL 545


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/481 (25%), Positives = 214/481 (44%), Gaps = 24/481 (4%)

Query: 64  MNKESCRTVRSM-TKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M  E C    S+   L++S         A  + N +   G  P  V Y   + ++  Q++
Sbjct: 103 MMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEK 162

Query: 123 FNS--IHSIMSQVEENGMDPDSIFFNAVINAFSES----GNMEEAMDTFWKMKESGLTPT 176
             S  +  +  ++    +  + +     +  F+      G  ++A     +M   G  P 
Sbjct: 163 LPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPD 222

Query: 177 TSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
           TSTY+ +I     A K E++  L   M   G V P++ TY +L+ ++C    I +A  + 
Sbjct: 223 TSTYSKVITFLCHATKVEKAFLLFQEMKMVG-VTPDVYTYTILIDSFCKAGLIEQAQWLF 281

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
            +M + G  P VVTY  +  AY +  +  QA ++   M   G +PN  T G ++ G CK 
Sbjct: 282 EEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKA 341

Query: 297 GKIKEALR-FARTM---------------KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEV 340
           G I +A   +A+ +                 + + PN+V +  L+ G  +    D   E+
Sbjct: 342 GNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHEL 401

Query: 341 LALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVR 400
           L  M      P+ I Y  +++ +  AG +D  +E+F  M K G  P  H Y+ L     +
Sbjct: 402 LDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFK 461

Query: 401 EQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKT 460
           +   + A ++L  M++    PNVV +T +I G C  G  ++A+++   M E G SPN+ T
Sbjct: 462 DGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVT 521

Query: 461 FETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIK 520
           +  L+ G  +A +   + ++   M   G  P   T+ +L     A GL  +A+ +L ++K
Sbjct: 522 YTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMK 581

Query: 521 N 521
            
Sbjct: 582 Q 582



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 95/412 (23%), Positives = 183/412 (44%), Gaps = 23/412 (5%)

Query: 130 MSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGI 189
           +  +E      D++    +I+   E+   +EAM    +M+ +   P   TY TL+ G+  
Sbjct: 30  LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLK 89

Query: 190 AGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVV 249
             +     +++++M  EG   PN   +N LV ++CNEK+   A+ ++++M   G  P  V
Sbjct: 90  KKQLGWCKRIINMMMTEG-CNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYV 148

Query: 250 TYNTIATAYAQNGE------ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEAL 303
            YN    +     +       D AE++  EM       N           C  GK  +A 
Sbjct: 149 VYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAF 208

Query: 304 RFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAW 363
           +  + M   G  P+   ++ +I         +    +   MK   V PDV TY+ +++++
Sbjct: 209 QLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSF 268

Query: 364 STAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNV 423
             AG +++ + +F++M   G  P    Y+ L   Y++ ++  +A ++   M+++G  PN 
Sbjct: 269 CKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPND 328

Query: 424 VIFTTIISGWCSDGSMDRAIEVFDKM--------------CE--HGVSPNLKTFETLMWG 467
           V +  ++ G C  G++ +A EV+ K+              CE  H ++PN+ T+  L+ G
Sbjct: 329 VTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVVTYGALVDG 388

Query: 468 YSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKI 519
             +A +   A E+L  M + G  P    +  L +     G    A+ +  ++
Sbjct: 389 LCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 440



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 112/468 (23%), Positives = 208/468 (44%), Gaps = 29/468 (6%)

Query: 86  GKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSIFF 145
           GK  +A  +   ++  G  P   TY+ ++  L    +      +  +++  G+ PD   +
Sbjct: 202 GKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTY 261

Query: 146 NAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSR 205
             +I++F ++G +E+A   F +M+  G +PT  TY  LI  Y  A +  ++  +   M  
Sbjct: 262 TILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVD 321

Query: 206 EGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASG----------------MKPDVV 249
            G  +PN  TY  LV   C   NI++A+ V  K+  +                 + P+VV
Sbjct: 322 AG-CRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPNVV 380

Query: 250 TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTM 309
           TY  +     +  + D A E++  M  +G +PN      +I G+CK GKI  A      M
Sbjct: 381 TYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQM 440

Query: 310 KEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFM 369
            + G  P++  +  LI    +    D   +VL+ M +    P+V+TY+ +++     G  
Sbjct: 441 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGES 500

Query: 370 DKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTI 429
           +K  ++   M + G  P+   Y+ L  G  +  + + + +L   M   G  PN V +  +
Sbjct: 501 EKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVL 560

Query: 430 ISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYSEARQPWRAEEILQIMKAFGV 489
           I+  C+ G +D+A  +  +M +      L+ +   + G+S++     +  IL+ M+++G 
Sbjct: 561 INHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIA--SLGILEEMESYGT 618

Query: 490 HPQKSTFLLLAEARRATG-------LTKEAKRILSKIKNKERTNEMEA 530
            P    + +L +     G       L KE   + S +K     N+M A
Sbjct: 619 VPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTD---NDMYA 663



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 174/375 (46%), Gaps = 9/375 (2%)

Query: 86  GKPQEAQAIFNNLIEGGH--KPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENGMDPDSI 143
           G    A + F    E  H   P++VTY  L+  L    + +  H ++  +  +G +P+ I
Sbjct: 356 GTSDSADSDFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHI 415

Query: 144 FFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLM 203
            ++A+I+ F ++G ++ A + F +M + G  P+  TY +LI      G+ + ++K+L  M
Sbjct: 416 VYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQM 475

Query: 204 SREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGE 263
            ++ +  PN+ TY  ++   C      +A  ++  M   G  P+VVTY  +     + G+
Sbjct: 476 LKD-SCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 534

Query: 264 ADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNL 323
            D + ++  +M   G  PN  T  ++I+  C  G + +A      MK+      L  +  
Sbjct: 535 IDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRC 594

Query: 324 LIKGFVE-IMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGK- 381
            I+GF +  +   G+   L  M+ +   P    Y  +++ +S AG ++   E+  +M + 
Sbjct: 595 AIQGFSKSFIASLGI---LEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEV 651

Query: 382 -AGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMD 440
            + +K D   Y+ L +      + E+A  L   M   GF P + +F  +I G       D
Sbjct: 652 PSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWD 711

Query: 441 RAIEVFDKMCEHGVS 455
            A+++   +C  GV+
Sbjct: 712 EALQLCYGICHEGVN 726



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 125/267 (46%), Gaps = 5/267 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           +V + T L++ + + G+   A  + + +++    P++VTYT ++  L           ++
Sbjct: 448 SVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLL 507

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
           S +EE G  P+ + + A+I+   ++G ++ ++D F +M   G +P   TY  LI     A
Sbjct: 508 SLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAA 567

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G  +++  LL  M ++      L+ Y   ++ +   K+   +  ++ +M + G  P    
Sbjct: 568 GLLDKARLLLGEM-KQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMESYGTVPIAPV 624

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEH--NGVQPNGRTCGIIISGYCKEGKIKEALRFART 308
           Y  +   +++ G  + A E+  EM    + V+ +      +I   C   +++EA R    
Sbjct: 625 YGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSE 684

Query: 309 MKEYGVHPNLVIFNLLIKGFVEIMDRD 335
           M   G  P L +F  LIKG VE+   D
Sbjct: 685 MTRRGFVPELSVFVCLIKGLVEVKKWD 711



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/255 (21%), Positives = 110/255 (43%), Gaps = 35/255 (13%)

Query: 64  MNKESCR-TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKR 122
           M K+SC   V + T +++ L   G+ ++A  + + + E G  P++VTYT L+  L    +
Sbjct: 475 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGK 534

Query: 123 FNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAM-------DTFW--------- 166
            +    + +Q+   G  P+ + +  +IN    +G +++A         T+W         
Sbjct: 535 IDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRC 594

Query: 167 -----------------KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLL-DLMSREGN 208
                            +M+  G  P    Y  LI  +  AG+ E +++L  ++M    +
Sbjct: 595 AIQGFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSS 654

Query: 209 VKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAE 268
           VK +   Y  L++A C    + EA+ +  +M   G  P++  +  +     +  + D+A 
Sbjct: 655 VKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEAL 714

Query: 269 EVIVEMEHNGVQPNG 283
           ++   + H GV   G
Sbjct: 715 QLCYGICHEGVNWQG 729



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/292 (20%), Positives = 114/292 (39%), Gaps = 50/292 (17%)

Query: 274 MEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMD 333
           M  +G   +  T G      CKEG+  +AL     ++      + V+   +I G   +M+
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDM---IEREDFKLDTVLCTHMISG---LME 54

Query: 334 RDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHA 390
               DE ++ +   R N   P+V+TY T+++ +     +  CK I + M   G  P+   
Sbjct: 55  ASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSL 114

Query: 391 YSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSD-------------- 436
           ++ L   Y  E++   A +LL  M   G  P  V++   I   C                
Sbjct: 115 FNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEK 174

Query: 437 ---------------------------GSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
                                      G  D+A ++  +M   G  P+  T+  ++    
Sbjct: 175 IYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLC 234

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKN 521
            A +  +A  + Q MK  GV P   T+ +L ++    GL ++A+ +  ++++
Sbjct: 235 HATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRS 286


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 118/447 (26%), Positives = 212/447 (47%), Gaps = 11/447 (2%)

Query: 67  ESCRTVR-SMTK-------LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALT 118
           E+CRT++ S++        L+  LIE G+  +A+     +     +PS  T  +++  L 
Sbjct: 326 EACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELC 385

Query: 119 IQKRFNSIHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKM--KESGLTPT 176
              R +S  S++  + + G  PD    + +IN   ++  ++EA +    M  K S  + +
Sbjct: 386 KAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGMDRKISSRSSS 445

Query: 177 TSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVM 236
             +YN+L+     A K  ++  +   M  E +  P++ +Y++L+  +C    +  A  + 
Sbjct: 446 CFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLY 505

Query: 237 HKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKE 296
            +M      P+V TYN       + G    A+ V  EM   G  P+  T   +I G+   
Sbjct: 506 KQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLA 565

Query: 297 GKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY 356
            K  +A     TM   G  PN V +N L+ G  +    D   E+   M E   +PD +TY
Sbjct: 566 RKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTY 625

Query: 357 STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIE 416
           +T++  +   G +++  E+FD+M   G  PD  AY+ L KG+ R  +P +A++L   M+ 
Sbjct: 626 TTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVS 685

Query: 417 SGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKM-CEHGVSPNLKTFETLMWGYSEARQPW 475
               P+ V    +I G      +D A+EVF++M  +HG SP+L T+ +L++G    ++  
Sbjct: 686 RQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLS 745

Query: 476 RAEEILQIMKAFGVHPQKSTFLLLAEA 502
            A ++ + +    + P    F +L EA
Sbjct: 746 EAMKVFKEIDRLKLSPDPHAFNVLLEA 772



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/492 (23%), Positives = 234/492 (47%), Gaps = 53/492 (10%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTL-LAALTIQKRFNSIHSIMSQVEEN 136
           L+ + + + K  EA  +F  +++ G KP    Y+ + LA   ++    +    +    E+
Sbjct: 240 LLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVES 299

Query: 137 GMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGY---GIAGKP 193
               +++ + A ++   +SG +E+A +    M+ES L+ +   Y+ LI+     G   K 
Sbjct: 300 KAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQES-LSSSQPVYDMLIRLLIESGRIDKA 358

Query: 194 EESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNT 253
           EE+   L++  R  N++P+  T + +++  C    +  A +++  M   G  PD+ T++ 
Sbjct: 359 EEAC--LEIAGR--NIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSM 414

Query: 254 IATAYAQNGEADQAEEVIVEMEHN--GVQPNGRTCGIIISGYCKEGKIKEALRFARTM-K 310
           +     +  +  +A+E +  M+        +  +   +++  CK  K+ +A     TM  
Sbjct: 415 LINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVS 474

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITY-------------- 356
           E    P++V +++LI GF +I +    +++   M +    P+V TY              
Sbjct: 475 ERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIA 534

Query: 357 ---------------------STIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILA 395
                                ST+++ +S A   D+  E+F+ M   G +P+A  Y+ L 
Sbjct: 535 DAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLL 594

Query: 396 KGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVS 455
            G  +E +P++A EL   M+E G  P+ V +TT++ G+C+ G +++A+EVFD+M   G  
Sbjct: 595 HGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHD 654

Query: 456 PNLKTFETLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRI 515
           P++  +  L+ G+  A +P  A+++ Q+M +    P   +  ++ +     GL+K AKR+
Sbjct: 655 PDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMID-----GLSK-AKRL 708

Query: 516 LSKIKNKERTNE 527
              ++  ER  +
Sbjct: 709 DDAVEVFERMEQ 720



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 123/524 (23%), Positives = 214/524 (40%), Gaps = 90/524 (17%)

Query: 66  KESCRTVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNS 125
           K SCR   ++  ++  L + G   EA   F  L     K  + TY  LL  L   +    
Sbjct: 93  KSSCR--ETVGAVIKHLRDGG---EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQ 147

Query: 126 IHSIMSQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYN---- 181
              +  ++   G+ P+   +  ++ +     N +EA+  F +M + G  P+++ Y     
Sbjct: 148 AGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTE 207

Query: 182 -------------------------------TLIKGYGIAGKPEESVKLLDLMSREGNVK 210
                                           L+  + I  K  E+ KL   M + G  K
Sbjct: 208 CLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEASKLFRAMVKSG-CK 266

Query: 211 PNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKP--DVV------------------- 249
           P+   Y+ +V A C  +N+ EA+ +  +MA     P  +V                    
Sbjct: 267 PDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFE 326

Query: 250 --------------TYNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCK 295
                          Y+ +     ++G  D+AEE  +E+    +QP+  TC  +I   CK
Sbjct: 327 ACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCK 386

Query: 296 EGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALM-----KEFRVN 350
            G++  AL    TM + G  P++   ++LI    E+   D + E    +     K    +
Sbjct: 387 AGRVDSALSLLETMIKRGYCPDMATHSMLIN---ELCKADKIQEAQEFLQGMDRKISSRS 443

Query: 351 PDVITYSTIMNAWSTAGFMDKCKEIFDDM-GKAGIKPDAHAYSILAKGYVREQEPEKAEE 409
               +Y++++N+   A  + +   IF  M  +    PD  +YSIL  G+ +  E  +AE+
Sbjct: 444 SSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEK 503

Query: 410 LLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFETLMWGYS 469
           L   MI+    PNV  +   ++G    G +  A  V+++M   G SP++ T+ TL+ G+S
Sbjct: 504 LYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFS 563

Query: 470 EARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAK 513
            AR+  +A E+ + M + G  P   T+  L       GL KE+K
Sbjct: 564 LARKHDQAHELFETMISRGCRPNAVTYNCLLH-----GLCKESK 602


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 185/359 (51%), Gaps = 10/359 (2%)

Query: 78  LMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIMSQVEENG 137
           L+N   + G  ++A+ IFN + + G +P+ V++ TL+  L   +  +    +   +EEN 
Sbjct: 229 LINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEENR 288

Query: 138 MDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIAGKPEESV 197
           + PD   ++ +I+   + G ++ A   F +M++ GL P   T+  LI G   + + + ++
Sbjct: 289 IYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAM 348

Query: 198 KLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATA 257
                M   G VKP+L  YN L+   C   ++ +A  ++ +M   GMKPD +TY T+   
Sbjct: 349 NTYHQMLTMG-VKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDG 407

Query: 258 YAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPN 317
           Y + G+ + A E+   M   GV  +      +ISG+C++G++++A R  R M E G+ P+
Sbjct: 408 YCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPD 467

Query: 318 LVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVN---PDVITYSTIMNAWSTAGFMDKCKE 374
              + ++I G+ +   +  V     L+KE ++N   P VITY+ +MN     G M     
Sbjct: 468 DATYTMVIDGYCK---KGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANM 524

Query: 375 IFDDMGKAGIKPDAHAYSILAKGYVREQEPEKAEELLMTMIESGFHPNVVIFTTIISGW 433
           + + M   G+ PD   Y+IL +G+ +     KAE+LL    E G   +   +T+++S +
Sbjct: 525 LLEAMLNLGVTPDDITYNILLEGHCKNG---KAEDLLKLRNEKGLIVDYAYYTSLVSEY 580



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 98/361 (27%), Positives = 181/361 (50%), Gaps = 6/361 (1%)

Query: 164 TFW-KMKESGLTPTTSTYNTLIKGYGIAGKPEESVKLLDLMSREGNVKPNLRTYNVLVRA 222
           TF+ ++ E G  P    YN LI  +   G   ++  + + + + G ++P   ++N L+  
Sbjct: 209 TFYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRG-LRPTTVSFNTLING 267

Query: 223 WCNEKNITEAWNVMHKMAASGMKPDVVTYNTIATAYAQNGEADQAEEVIVEMEHNGVQPN 282
            C  +N+ E + +   M  + + PDV TY+ +     + G  D AE++  EM+  G++PN
Sbjct: 268 LCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPN 327

Query: 283 GRTCGIIISGYCKEGKIKEALRFARTMKEYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLA 342
           G T   +I G  +  ++  A+     M   GV P+LV++N L+ G  ++ D +   +++ 
Sbjct: 328 GITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVD 387

Query: 343 LMKEFRVNPDVITYSTIMNAWSTAGFMDKCKEIFDDMGKAGIKPDAHAYSILAKGYVREQ 402
            MK   + PD ITY+T+++ +   G ++   EI   M + G+  D  A++ L  G+ R+ 
Sbjct: 388 EMKMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDG 447

Query: 403 EPEKAEELLMTMIESGFHPNVVIFTTIISGWCSDGSMDRAIEVFDKMCEHGVSPNLKTFE 462
               AE  L  M+E+G  P+   +T +I G+C  G++    ++  +M  +G  P + T+ 
Sbjct: 448 RVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYN 507

Query: 463 TLMWGYSEARQPWRAEEILQIMKAFGVHPQKSTFLLLAEARRATGLTKEAKRILSKIKNK 522
            LM G  +  Q   A  +L+ M   GV P   T+ +L E     G  ++    L K++N+
Sbjct: 508 VLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAED----LLKLRNE 563

Query: 523 E 523
           +
Sbjct: 564 K 564



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 155/328 (47%), Gaps = 4/328 (1%)

Query: 71  TVRSMTKLMNSLIERGKPQEAQAIFNNLIEGGHKPSLVTYTTLLAALTIQKRFNSIHSIM 130
           T  S   L+N L +     E   +   + E    P + TY+ L+  L  + R +    + 
Sbjct: 257 TTVSFNTLINGLCKSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLF 316

Query: 131 SQVEENGMDPDSIFFNAVINAFSESGNMEEAMDTFWKMKESGLTPTTSTYNTLIKGYGIA 190
            ++++ G+ P+ I F A+I+    S  M+ AM+T+ +M   G+ P    YNTL+ G    
Sbjct: 317 DEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKV 376

Query: 191 GKPEESVKLLDLMSREGNVKPNLRTYNVLVRAWCNEKNITEAWNVMHKMAASGMKPDVVT 250
           G   ++ KL+D M   G +KP+  TY  L+  +C E ++  A  +   M   G+  D V 
Sbjct: 377 GDVNKARKLVDEMKMVG-MKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVA 435

Query: 251 YNTIATAYAQNGEADQAEEVIVEMEHNGVQPNGRTCGIIISGYCKEGKIKEALRFARTMK 310
           +  + + + ++G    AE  + EM   G++P+  T  ++I GYCK+G +K   +  + M+
Sbjct: 436 FTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQ 495

Query: 311 EYGVHPNLVIFNLLIKGFVEIMDRDGVDEVLALMKEFRVNPDVITYSTIMNAWSTAGFMD 370
             G  P ++ +N+L+ G  +       + +L  M    V PD ITY+ ++      G   
Sbjct: 496 INGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNG--- 552

Query: 371 KCKEIFDDMGKAGIKPDAHAYSILAKGY 398
           K +++     + G+  D   Y+ L   Y
Sbjct: 553 KAEDLLKLRNEKGLIVDYAYYTSLVSEY 580


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.316    0.131    0.383 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,733,325,965
Number of Sequences: 23463169
Number of extensions: 403247186
Number of successful extensions: 1361132
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8678
Number of HSP's successfully gapped in prelim test: 4457
Number of HSP's that attempted gapping in prelim test: 1082918
Number of HSP's gapped (non-prelim): 85039
length of query: 637
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 488
effective length of database: 8,863,183,186
effective search space: 4325233394768
effective search space used: 4325233394768
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)